Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002484
(1509 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001095408.1| acyl-coenzyme A thioesterase 2, mitochondria... 753 0.0
Alignment gi|XP_002691045.1| PREDICTED: acyl-CoA thioesterase 2-like [Bos... 701 0.0
Alignment gi|XP_001253040.1| PREDICTED: acyl-CoA thioesterase 2-like [Bos... 701 0.0
Alignment gi|XP_002691047.1| PREDICTED: acyl-CoA thioesterase 6-like [Bos... 604 e-173
Alignment gi|XP_594692.2| PREDICTED: acyl-CoA thioesterase 6-like [Bos ta... 604 e-173
Alignment gi|NP_001092411.1| acyl-CoA thioesterase 4 [Bos taurus]. 580 e-166
Alignment gi|XP_002691046.1| PREDICTED: acyl-CoA thioesterase 4-like [Bos... 578 e-165
Alignment gi|XP_590080.3| PREDICTED: acyl-CoA thioesterase 4-like [Bos ta... 578 e-165
Alignment gi|XP_002700719.1| PREDICTED: acyl-CoA thioesterase 2-like [Bos... 457 e-128
Alignment gi|XP_002689916.1| PREDICTED: bile acid Coenzyme A: amino acid ... 343 3e-94
>ref|NP_001095408.1| acyl-coenzyme A thioesterase 2, mitochondrial [Bos taurus].
Length = 464
Score = 753 bits (1944), Expect = 0.0
Identities = 372/463 (80%), Positives = 391/463 (84%)
Frame = +1
Query: 22 MVASYLALLRATRLYQVGHTSCGRLVGLPKLRTANPISWTPFRMAATVTLEPAGRCCWDE 201
MVAS ALLR + G T +L G KLRT NP+SWT R+ TVTLEPAGRC WDE
Sbjct: 1 MVASSQALLRHFGFCRWGPTPWVQLAGSLKLRTGNPVSWTTVRLVTTVTLEPAGRCRWDE 60
Query: 202 PVRIAVRGLAPEQPVTLRASLRDEKGALFRAHARYCADTDGQLDLARAPALGGSFVGLEP 381
PVRI VRGLAP QPVTLRASLRDEKGALFRAHARYCAD G LDL RAPALGGSF GLEP
Sbjct: 61 PVRITVRGLAPGQPVTLRASLRDEKGALFRAHARYCADAAGLLDLERAPALGGSFTGLEP 120
Query: 382 MGLFWALEPEKPLLRLVKRDVQTPFAVELEVFDGHEPEGGRLLGRAVHERDFLPPGVRRE 561
MGLFWA+EPEKP LRLVKRDVQTPFAVELEV D HEP GRLLGR VHERDFL PGVRRE
Sbjct: 121 MGLFWAMEPEKPFLRLVKRDVQTPFAVELEVLDNHEPRVGRLLGRVVHERDFLAPGVRRE 180
Query: 562 PVRAGRVRATXXXXXXXXXXXXIVDLFGAGGGLPEYRASLLAGKGFAVMALAYHNYEDLP 741
PVRAGRVRAT IVD+ GAGGGL EYRASLLAGKGFAVMALAY+NYEDLP
Sbjct: 181 PVRAGRVRATLFLPPEPGPFPGIVDILGAGGGLLEYRASLLAGKGFAVMALAYYNYEDLP 240
Query: 742 KGIENVHLEYFEEAVNYLLSHPQVKGPGVGLLGISKGGELCLSMASFLKSITATVVINAS 921
KG+EN+HLEYFEEAVNYLL+HPQVKGPGVGLLGISKGGELCLSMASFLK I+A V+IN S
Sbjct: 241 KGLENLHLEYFEEAVNYLLNHPQVKGPGVGLLGISKGGELCLSMASFLKGISAAVIINGS 300
Query: 922 VANIGGTLHYKGETLPPLGTNPSRIKATKDGVADILHVLNSPLEGPDQKSFIPVERAESA 1101
VA +GG LHYKGE +PP+G N +RIK TKDG DI+ VLNSPLEGPDQKSFIPVERAE
Sbjct: 301 VAYVGGNLHYKGEIMPPVGFNQNRIKMTKDGFVDIVEVLNSPLEGPDQKSFIPVERAECP 360
Query: 1102 FLFLVGQDDHNWKSEFYANEASKRLQAHGKEKPQIICYPRAGHYIEPPYFPLCRASLHVL 1281
FLFLVGQDDHNWKSEFYANEASKRLQAHGK KPQ+ICYP GHYIEPPYFPLC ASLH +
Sbjct: 361 FLFLVGQDDHNWKSEFYANEASKRLQAHGKAKPQVICYPGTGHYIEPPYFPLCPASLHTI 420
Query: 1282 VGRPVIWGGEPRAHAMAQVDAWQQLQTFFHKHLGGEKGTIPTK 1410
VG PVIWGGEPRAHA AQVDAWQQLQTFFHKHLGGEKG IP K
Sbjct: 421 VGAPVIWGGEPRAHARAQVDAWQQLQTFFHKHLGGEKGRIPAK 463
>ref|XP_002691045.1| PREDICTED: acyl-CoA thioesterase 2-like [Bos taurus].
Length = 421
Score = 701 bits (1808), Expect = 0.0
Identities = 344/420 (81%), Positives = 358/420 (85%)
Frame = +1
Query: 151 MAATVTLEPAGRCCWDEPVRIAVRGLAPEQPVTLRASLRDEKGALFRAHARYCADTDGQL 330
M TV LEPAGRC WDE V I V GLAP QPVTLR+SLRDEKGALFRAHARYCAD G L
Sbjct: 1 MTVTVMLEPAGRCRWDERVHITVSGLAPRQPVTLRSSLRDEKGALFRAHARYCADAAGLL 60
Query: 331 DLARAPALGGSFVGLEPMGLFWALEPEKPLLRLVKRDVQTPFAVELEVFDGHEPEGGRLL 510
DL RAPALGGSF GLEPMGLFWALEPEKPLLRLVKRDVQTPF VELEV DGHEP RLL
Sbjct: 61 DLERAPALGGSFAGLEPMGLFWALEPEKPLLRLVKRDVQTPFVVELEVVDGHEPGAQRLL 120
Query: 511 GRAVHERDFLPPGVRREPVRAGRVRATXXXXXXXXXXXXIVDLFGAGGGLPEYRASLLAG 690
GRAVHERDFL PGVRREPVRAGRVRAT IVD+ AGGG EYRASLLAG
Sbjct: 121 GRAVHERDFLAPGVRREPVRAGRVRATLFLPPEPAPFPGIVDISAAGGGFLEYRASLLAG 180
Query: 691 KGFAVMALAYHNYEDLPKGIENVHLEYFEEAVNYLLSHPQVKGPGVGLLGISKGGELCLS 870
KGFAV+ALAY+NYEDLPK + +VHLEYFEEAVNYLL+HPQVKGPGVGLLGISKGGELCLS
Sbjct: 181 KGFAVLALAYYNYEDLPKSLRHVHLEYFEEAVNYLLNHPQVKGPGVGLLGISKGGELCLS 240
Query: 871 MASFLKSITATVVINASVANIGGTLHYKGETLPPLGTNPSRIKATKDGVADILHVLNSPL 1050
MASFLK I+A V+IN SV N+ GTLHYKGETLPP+G N +RIK TKDG DI+ VLNSPL
Sbjct: 241 MASFLKGISAAVIINGSVHNVWGTLHYKGETLPPVGFNQNRIKMTKDGFVDIVEVLNSPL 300
Query: 1051 EGPDQKSFIPVERAESAFLFLVGQDDHNWKSEFYANEASKRLQAHGKEKPQIICYPRAGH 1230
EGPDQKSFIPVERAE FLFLVGQDDHNWKSEFYANEASKRLQAHGK KPQ+ICYP GH
Sbjct: 301 EGPDQKSFIPVERAECPFLFLVGQDDHNWKSEFYANEASKRLQAHGKAKPQVICYPGTGH 360
Query: 1231 YIEPPYFPLCRASLHVLVGRPVIWGGEPRAHAMAQVDAWQQLQTFFHKHLGGEKGTIPTK 1410
YIEPPYFPLC ASLH VG PVIWGGEP AHA AQVDAWQQLQTFFHKHL GEKGTIP K
Sbjct: 361 YIEPPYFPLCPASLHTFVGTPVIWGGEPMAHARAQVDAWQQLQTFFHKHLSGEKGTIPAK 420
>ref|XP_001253040.1| PREDICTED: acyl-CoA thioesterase 2-like [Bos taurus].
Length = 421
Score = 701 bits (1808), Expect = 0.0
Identities = 344/420 (81%), Positives = 358/420 (85%)
Frame = +1
Query: 151 MAATVTLEPAGRCCWDEPVRIAVRGLAPEQPVTLRASLRDEKGALFRAHARYCADTDGQL 330
M TV LEPAGRC WDE V I V GLAP QPVTLR+SLRDEKGALFRAHARYCAD G L
Sbjct: 1 MTVTVMLEPAGRCRWDERVHITVSGLAPRQPVTLRSSLRDEKGALFRAHARYCADAAGLL 60
Query: 331 DLARAPALGGSFVGLEPMGLFWALEPEKPLLRLVKRDVQTPFAVELEVFDGHEPEGGRLL 510
DL RAPALGGSF GLEPMGLFWALEPEKPLLRLVKRDVQTPF VELEV DGHEP RLL
Sbjct: 61 DLERAPALGGSFAGLEPMGLFWALEPEKPLLRLVKRDVQTPFVVELEVVDGHEPGAQRLL 120
Query: 511 GRAVHERDFLPPGVRREPVRAGRVRATXXXXXXXXXXXXIVDLFGAGGGLPEYRASLLAG 690
GRAVHERDFL PGVRREPVRAGRVRAT IVD+ AGGG EYRASLLAG
Sbjct: 121 GRAVHERDFLAPGVRREPVRAGRVRATLFLPPEPAPFPGIVDISAAGGGFLEYRASLLAG 180
Query: 691 KGFAVMALAYHNYEDLPKGIENVHLEYFEEAVNYLLSHPQVKGPGVGLLGISKGGELCLS 870
KGFAV+ALAY+NYEDLPK + +VHLEYFEEAVNYLL+HPQVKGPGVGLLGISKGGELCLS
Sbjct: 181 KGFAVLALAYYNYEDLPKSLRHVHLEYFEEAVNYLLNHPQVKGPGVGLLGISKGGELCLS 240
Query: 871 MASFLKSITATVVINASVANIGGTLHYKGETLPPLGTNPSRIKATKDGVADILHVLNSPL 1050
MASFLK I+A V+IN SV N+ GTLHYKGETLPP+G N +RIK TKDG DI+ VLNSPL
Sbjct: 241 MASFLKGISAAVIINGSVHNVWGTLHYKGETLPPVGFNQNRIKMTKDGFVDIVEVLNSPL 300
Query: 1051 EGPDQKSFIPVERAESAFLFLVGQDDHNWKSEFYANEASKRLQAHGKEKPQIICYPRAGH 1230
EGPDQKSFIPVERAE FLFLVGQDDHNWKSEFYANEASKRLQAHGK KPQ+ICYP GH
Sbjct: 301 EGPDQKSFIPVERAECPFLFLVGQDDHNWKSEFYANEASKRLQAHGKAKPQVICYPGTGH 360
Query: 1231 YIEPPYFPLCRASLHVLVGRPVIWGGEPRAHAMAQVDAWQQLQTFFHKHLGGEKGTIPTK 1410
YIEPPYFPLC ASLH VG PVIWGGEP AHA AQVDAWQQLQTFFHKHL GEKGTIP K
Sbjct: 361 YIEPPYFPLCPASLHTFVGTPVIWGGEPMAHARAQVDAWQQLQTFFHKHLSGEKGTIPAK 420
>ref|XP_002691047.1| PREDICTED: acyl-CoA thioesterase 6-like [Bos taurus].
Length = 421
Score = 604 bits (1558), Expect = e-173
Identities = 296/420 (70%), Positives = 337/420 (80%)
Frame = +1
Query: 151 MAATVTLEPAGRCCWDEPVRIAVRGLAPEQPVTLRASLRDEKGALFRAHARYCADTDGQL 330
MA TVTLEPAGRC WDEPVRI VRGLAP QPVTLRASLRDEKGALFRAHARYCAD G L
Sbjct: 1 MAVTVTLEPAGRCRWDEPVRITVRGLAPGQPVTLRASLRDEKGALFRAHARYCADAAGLL 60
Query: 331 DLARAPALGGSFVGLEPMGLFWALEPEKPLLRLVKRDVQTPFAVELEVFDGHEPEGGRLL 510
DL RAPALGGSF GLEPMGLFWA+EPEKPLLRLVKRDVQTPFAVELEV DGHEPE RLL
Sbjct: 61 DLERAPALGGSFAGLEPMGLFWAMEPEKPLLRLVKRDVQTPFAVELEVLDGHEPEAQRLL 120
Query: 511 GRAVHERDFLPPGVRREPVRAGRVRATXXXXXXXXXXXXIVDLFGAGGGLPEYRASLLAG 690
GRAVH+RDFL PGVRREPVRAGRVRAT I+DLFG+ GGL EYRASLLAG
Sbjct: 121 GRAVHKRDFLAPGVRREPVRAGRVRATLFLPPGSKPFPGILDLFGSSGGLCEYRASLLAG 180
Query: 691 KGFAVMALAYHNYEDLPKGIENVHLEYFEEAVNYLLSHPQVKGPGVGLLGISKGGELCLS 870
GFAV+ALAY +EDLP+ + +V LEYFEEAVN++L HP+VKGPGVGLLG SKGG+LCLS
Sbjct: 181 HGFAVLALAYFRFEDLPEHLNDVCLEYFEEAVNFMLQHPKVKGPGVGLLGFSKGGDLCLS 240
Query: 871 MASFLKSITATVVINASVANIGGTLHYKGETLPPLGTNPSRIKATKDGVADILHVLNSPL 1050
MASFLK ITAT+VINA VAN LHYK +P L + + T+ G + + + +PL
Sbjct: 241 MASFLKGITATIVINACVANTLAPLHYKDMIIPELSYDLEKYTITESGFLNFVDIWGNPL 300
Query: 1051 EGPDQKSFIPVERAESAFLFLVGQDDHNWKSEFYANEASKRLQAHGKEKPQIICYPRAGH 1230
E + +S IP+E+A+ FLF+V DDHNWKSE YA AS+RLQAHGK++PQII YP GH
Sbjct: 301 EKTNHQSLIPLEKAQGPFLFIVSMDDHNWKSEVYARIASERLQAHGKDRPQIIYYPGTGH 360
Query: 1231 YIEPPYFPLCRASLHVLVGRPVIWGGEPRAHAMAQVDAWQQLQTFFHKHLGGEKGTIPTK 1410
I+PPYFPLCRAS+H ++G+PV GGEP+AH+ AQ DAWQQ+QTFFHKHL G+K P+K
Sbjct: 361 CIDPPYFPLCRASVHAVLGQPVFHGGEPKAHSNAQADAWQQIQTFFHKHLNGKKSVRPSK 420
>ref|XP_594692.2| PREDICTED: acyl-CoA thioesterase 6-like [Bos taurus].
Length = 421
Score = 604 bits (1558), Expect = e-173
Identities = 296/420 (70%), Positives = 337/420 (80%)
Frame = +1
Query: 151 MAATVTLEPAGRCCWDEPVRIAVRGLAPEQPVTLRASLRDEKGALFRAHARYCADTDGQL 330
MA TVTLEPAGRC WDEPVRI VRGLAP QPVTLRASLRDEKGALFRAHARYCAD G L
Sbjct: 1 MAVTVTLEPAGRCRWDEPVRITVRGLAPGQPVTLRASLRDEKGALFRAHARYCADAAGLL 60
Query: 331 DLARAPALGGSFVGLEPMGLFWALEPEKPLLRLVKRDVQTPFAVELEVFDGHEPEGGRLL 510
DL RAPALGGSF GLEPMGLFWA+EPEKPLLRLVKRDVQTPFAVELEV DGHEPE RLL
Sbjct: 61 DLERAPALGGSFAGLEPMGLFWAMEPEKPLLRLVKRDVQTPFAVELEVLDGHEPEAQRLL 120
Query: 511 GRAVHERDFLPPGVRREPVRAGRVRATXXXXXXXXXXXXIVDLFGAGGGLPEYRASLLAG 690
GRAVH+RDFL PGVRREPVRAGRVRAT I+DLFG+ GGL EYRASLLAG
Sbjct: 121 GRAVHKRDFLAPGVRREPVRAGRVRATLFLPPGSKPFPGILDLFGSSGGLCEYRASLLAG 180
Query: 691 KGFAVMALAYHNYEDLPKGIENVHLEYFEEAVNYLLSHPQVKGPGVGLLGISKGGELCLS 870
GFAV+ALAY +EDLP+ + +V LEYFEEAVN++L HP+VKGPGVGLLG SKGG+LCLS
Sbjct: 181 HGFAVLALAYFRFEDLPEHLNDVCLEYFEEAVNFMLQHPKVKGPGVGLLGFSKGGDLCLS 240
Query: 871 MASFLKSITATVVINASVANIGGTLHYKGETLPPLGTNPSRIKATKDGVADILHVLNSPL 1050
MASFLK ITAT+VINA VAN LHYK +P L + + T+ G + + + +PL
Sbjct: 241 MASFLKGITATIVINACVANTLAPLHYKDMIIPELSYDLEKYTITESGFLNFVDIWGNPL 300
Query: 1051 EGPDQKSFIPVERAESAFLFLVGQDDHNWKSEFYANEASKRLQAHGKEKPQIICYPRAGH 1230
E + +S IP+E+A+ FLF+V DDHNWKSE YA AS+RLQAHGK++PQII YP GH
Sbjct: 301 EKTNHQSLIPLEKAQGPFLFIVSMDDHNWKSEVYARIASERLQAHGKDRPQIIYYPGTGH 360
Query: 1231 YIEPPYFPLCRASLHVLVGRPVIWGGEPRAHAMAQVDAWQQLQTFFHKHLGGEKGTIPTK 1410
I+PPYFPLCRAS+H ++G+PV GGEP+AH+ AQ DAWQQ+QTFFHKHL G+K P+K
Sbjct: 361 CIDPPYFPLCRASVHAVLGQPVFHGGEPKAHSNAQADAWQQIQTFFHKHLNGKKSVRPSK 420
>ref|NP_001092411.1| acyl-CoA thioesterase 4 [Bos taurus].
Length = 416
Score = 580 bits (1496), Expect = e-166
Identities = 282/411 (68%), Positives = 324/411 (78%)
Frame = +1
Query: 151 MAATVTLEPAGRCCWDEPVRIAVRGLAPEQPVTLRASLRDEKGALFRAHARYCADTDGQL 330
M TVTLEPAGRC WDEPVRIAVRGLAP QPVTLRASLRDEKGALFRAHARYCAD G L
Sbjct: 1 MTVTVTLEPAGRCRWDEPVRIAVRGLAPGQPVTLRASLRDEKGALFRAHARYCADATGLL 60
Query: 331 DLARAPALGGSFVGLEPMGLFWALEPEKPLLRLVKRDVQTPFAVELEVFDGHEPEGGRLL 510
DL RAPALGGSF GLEPMGLFWALEPEKP R +KRDVQTPF VELEV DGHEP+ RLL
Sbjct: 61 DLERAPALGGSFAGLEPMGLFWALEPEKPFWRFLKRDVQTPFVVELEVLDGHEPKAQRLL 120
Query: 511 GRAVHERDFLPPGVRREPVRAGRVRATXXXXXXXXXXXXIVDLFGAGGGLPEYRASLLAG 690
GRAVHERDFL PGVRREPVRAGRVRAT I+D+FG GGGL EYRASLLAG
Sbjct: 121 GRAVHERDFLAPGVRREPVRAGRVRATLFLPPGSGPFPGIIDIFGIGGGLLEYRASLLAG 180
Query: 691 KGFAVMALAYHNYEDLPKGIENVHLEYFEEAVNYLLSHPQVKGPGVGLLGISKGGELCLS 870
GFA +ALAY++++DLPK + +HLEYFEEA+ Y+L H Q+KG +GLLGIS G ++CLS
Sbjct: 181 HGFATLALAYYDFDDLPKKFDMIHLEYFEEALCYMLQHSQIKGTRIGLLGISLGADICLS 240
Query: 871 MASFLKSITATVVINASVANIGGTLHYKGETLPPLGTNPSRIKATKDGVADILHVLNSPL 1050
MASFLK+I+ATV IN S + +HYK +PPLG + R+K G+ DI+ V N +
Sbjct: 241 MASFLKNISATVSINGSGFSGHRVIHYKDSNIPPLGHDLRRVKVAFSGLLDIVDVRNDII 300
Query: 1051 EGPDQKSFIPVERAESAFLFLVGQDDHNWKSEFYANEASKRLQAHGKEKPQIICYPRAGH 1230
G + IP+E+A+ LF+VGQDDHNW+SE YA AS+RLQAHGKEKPQII YP GH
Sbjct: 301 GGCENPCMIPIEKAQGPILFIVGQDDHNWRSELYAQIASERLQAHGKEKPQIISYPGTGH 360
Query: 1231 YIEPPYFPLCRASLHVLVGRPVIWGGEPRAHAMAQVDAWQQLQTFFHKHLG 1383
YIEPPYFP+C ASLH L+ +PV+WGGEPRAH+ AQVDAW+++ TFF KHLG
Sbjct: 361 YIEPPYFPMCPASLHKLLDKPVMWGGEPRAHSKAQVDAWKEILTFFTKHLG 411
>ref|XP_002691046.1| PREDICTED: acyl-CoA thioesterase 4-like [Bos taurus].
Length = 416
Score = 578 bits (1491), Expect = e-165
Identities = 281/411 (68%), Positives = 325/411 (79%)
Frame = +1
Query: 151 MAATVTLEPAGRCCWDEPVRIAVRGLAPEQPVTLRASLRDEKGALFRAHARYCADTDGQL 330
M ATVTLEPAGRC WDEPVRI VRGLAP QPVTLRASLRDEKGALFRAHARYCAD G L
Sbjct: 1 MVATVTLEPAGRCRWDEPVRITVRGLAPGQPVTLRASLRDEKGALFRAHARYCADATGLL 60
Query: 331 DLARAPALGGSFVGLEPMGLFWALEPEKPLLRLVKRDVQTPFAVELEVFDGHEPEGGRLL 510
DL RA ALGGSF GLEPMGLFWALEPEKP R +KRDVQTPFAVELEV DGHEPE RLL
Sbjct: 61 DLERALALGGSFAGLEPMGLFWALEPEKPFWRFLKRDVQTPFAVELEVLDGHEPETQRLL 120
Query: 511 GRAVHERDFLPPGVRREPVRAGRVRATXXXXXXXXXXXXIVDLFGAGGGLPEYRASLLAG 690
GRAVHERDFL PGVRREPVRAGRVRAT I+D++G GGGL EYRASLLAG
Sbjct: 121 GRAVHERDFLAPGVRREPVRAGRVRATLFLPPGSGPFPGIIDIYGIGGGLLEYRASLLAG 180
Query: 691 KGFAVMALAYHNYEDLPKGIENVHLEYFEEAVNYLLSHPQVKGPGVGLLGISKGGELCLS 870
GFA +A+AY+++EDLPK + + L+YFEEA+ Y+L H Q+KGPG+GLLGIS G ++CLS
Sbjct: 181 HGFATLAVAYYSFEDLPKKFDTIDLDYFEEALCYMLQHAQIKGPGIGLLGISLGADICLS 240
Query: 871 MASFLKSITATVVINASVANIGGTLHYKGETLPPLGTNPSRIKATKDGVADILHVLNSPL 1050
MASFLK+++ATV IN S N ++YK +PPLG + R+K G+ DI+ V N +
Sbjct: 241 MASFLKNVSATVTINGSGFNGNKAMYYKENCIPPLGHDLRRVKVAFSGLVDIVDVRNDIV 300
Query: 1051 EGPDQKSFIPVERAESAFLFLVGQDDHNWKSEFYANEASKRLQAHGKEKPQIICYPRAGH 1230
G + IP+E+A+ LF+VGQDDHNW+SEF A AS+RLQAHGKEKPQII YP GH
Sbjct: 301 GGCENPCMIPIEKAQGPILFIVGQDDHNWRSEFCAQIASERLQAHGKEKPQIISYPGTGH 360
Query: 1231 YIEPPYFPLCRASLHVLVGRPVIWGGEPRAHAMAQVDAWQQLQTFFHKHLG 1383
YIEPPYFP+C ASLH L+ +PV+WGGEPRAH+ AQVDAW+++ TFF KHLG
Sbjct: 361 YIEPPYFPMCPASLHKLLDKPVMWGGEPRAHSKAQVDAWKKILTFFTKHLG 411
>ref|XP_590080.3| PREDICTED: acyl-CoA thioesterase 4-like [Bos taurus].
Length = 416
Score = 578 bits (1491), Expect = e-165
Identities = 281/411 (68%), Positives = 325/411 (79%)
Frame = +1
Query: 151 MAATVTLEPAGRCCWDEPVRIAVRGLAPEQPVTLRASLRDEKGALFRAHARYCADTDGQL 330
M ATVTLEPAGRC WDEPVRI VRGLAP QPVTLRASLRDEKGALFRAHARYCAD G L
Sbjct: 1 MVATVTLEPAGRCRWDEPVRITVRGLAPGQPVTLRASLRDEKGALFRAHARYCADATGLL 60
Query: 331 DLARAPALGGSFVGLEPMGLFWALEPEKPLLRLVKRDVQTPFAVELEVFDGHEPEGGRLL 510
DL RA ALGGSF GLEPMGLFWALEPEKP R +KRDVQTPFAVELEV DGHEPE RLL
Sbjct: 61 DLERALALGGSFAGLEPMGLFWALEPEKPFWRFLKRDVQTPFAVELEVLDGHEPETQRLL 120
Query: 511 GRAVHERDFLPPGVRREPVRAGRVRATXXXXXXXXXXXXIVDLFGAGGGLPEYRASLLAG 690
GRAVHERDFL PGVRREPVRAGRVRAT I+D++G GGGL EYRASLLAG
Sbjct: 121 GRAVHERDFLAPGVRREPVRAGRVRATLFLPPGSGPFPGIIDIYGIGGGLLEYRASLLAG 180
Query: 691 KGFAVMALAYHNYEDLPKGIENVHLEYFEEAVNYLLSHPQVKGPGVGLLGISKGGELCLS 870
GFA +A+AY+++EDLPK + + L+YFEEA+ Y+L H Q+KGPG+GLLGIS G ++CLS
Sbjct: 181 HGFATLAVAYYSFEDLPKKFDTIDLDYFEEALCYMLQHAQIKGPGIGLLGISLGADICLS 240
Query: 871 MASFLKSITATVVINASVANIGGTLHYKGETLPPLGTNPSRIKATKDGVADILHVLNSPL 1050
MASFLK+++ATV IN S N ++YK +PPLG + R+K G+ DI+ V N +
Sbjct: 241 MASFLKNVSATVTINGSGFNGNKAMYYKENCIPPLGHDLRRVKVAFSGLVDIVDVRNDIV 300
Query: 1051 EGPDQKSFIPVERAESAFLFLVGQDDHNWKSEFYANEASKRLQAHGKEKPQIICYPRAGH 1230
G + IP+E+A+ LF+VGQDDHNW+SEF A AS+RLQAHGKEKPQII YP GH
Sbjct: 301 GGCENPCMIPIEKAQGPILFIVGQDDHNWRSEFCAQIASERLQAHGKEKPQIISYPGTGH 360
Query: 1231 YIEPPYFPLCRASLHVLVGRPVIWGGEPRAHAMAQVDAWQQLQTFFHKHLG 1383
YIEPPYFP+C ASLH L+ +PV+WGGEPRAH+ AQVDAW+++ TFF KHLG
Sbjct: 361 YIEPPYFPMCPASLHKLLDKPVMWGGEPRAHSKAQVDAWKKILTFFTKHLG 411
>ref|XP_002700719.1| PREDICTED: acyl-CoA thioesterase 2-like [Bos taurus].
Length = 291
Score = 457 bits (1175), Expect = e-128
Identities = 218/261 (83%), Positives = 231/261 (88%)
Frame = +1
Query: 628 IVDLFGAGGGLPEYRASLLAGKGFAVMALAYHNYEDLPKGIENVHLEYFEEAVNYLLSHP 807
IVD+ AGGG EYRASLLAGKGFAV+ALAY+NYEDLPK + +VHLEYFEEAVNYLL+HP
Sbjct: 30 IVDISAAGGGFLEYRASLLAGKGFAVLALAYYNYEDLPKSLRHVHLEYFEEAVNYLLNHP 89
Query: 808 QVKGPGVGLLGISKGGELCLSMASFLKSITATVVINASVANIGGTLHYKGETLPPLGTNP 987
QVKGPGVGLLGISKGGELCLSMASFLK I+A V+IN SV N+ GTLHYKGETLPP+G N
Sbjct: 90 QVKGPGVGLLGISKGGELCLSMASFLKGISAAVIINGSVHNVWGTLHYKGETLPPVGFNQ 149
Query: 988 SRIKATKDGVADILHVLNSPLEGPDQKSFIPVERAESAFLFLVGQDDHNWKSEFYANEAS 1167
+RIK TKDG DI+ VLNSPLEGPDQKSFIPVERAE FLFLVGQDDHNWKSEFYANEAS
Sbjct: 150 NRIKMTKDGFVDIVEVLNSPLEGPDQKSFIPVERAECPFLFLVGQDDHNWKSEFYANEAS 209
Query: 1168 KRLQAHGKEKPQIICYPRAGHYIEPPYFPLCRASLHVLVGRPVIWGGEPRAHAMAQVDAW 1347
KRLQAHGK KPQ+ICYP GHYIEPPYFPLC ASLH VG PVIWGGEP AHA AQVDAW
Sbjct: 210 KRLQAHGKAKPQVICYPGTGHYIEPPYFPLCPASLHTFVGTPVIWGGEPMAHARAQVDAW 269
Query: 1348 QQLQTFFHKHLGGEKGTIPTK 1410
QQLQTFFHKHL GEKGTIP K
Sbjct: 270 QQLQTFFHKHLSGEKGTIPAK 290
>ref|XP_002689916.1| PREDICTED: bile acid Coenzyme A: amino acid N-acyltransferase-like
[Bos taurus].
Length = 419
Score = 343 bits (879), Expect = 3e-94
Identities = 182/417 (43%), Positives = 259/417 (62%), Gaps = 4/417 (0%)
Frame = +1
Query: 163 VTLEPAGRCCWDEPVRIAVRGLAPEQPVTLRASLRDEKGALFRAHARYCADTDGQLDLAR 342
+T+ PA DEPV I GL P Q VTL A+++D+KG L+R+ A Y A+ G+LDL R
Sbjct: 4 LTVTPASALA-DEPVHIQATGLPPLQMVTLIATMKDDKGNLYRSRAFYRANEAGELDLKR 62
Query: 343 APALGGSFVGLEPMGLFWALEPEKPLLRLVKRDVQ-TPFAVELEVFDG---HEPEGGRLL 510
PA+GG ++G+ PMGL W+L+PE+P RL+KR+V TP + L+++D H+ +
Sbjct: 63 DPAVGGHYMGVHPMGLLWSLKPERPFDRLIKRNVMNTPTWITLDLYDSVYIHKVGEAQPK 122
Query: 511 GRAVHERDFLPPGVRREPVRAGRVRATXXXXXXXXXXXXIVDLFGAGGGLPEYRASLLAG 690
V +R F P ++R P+R GR+R ++DLFG GGL EYRASLLA
Sbjct: 123 ASQVLQRWFSSPDLQRVPIREGRIRGALFLPPGEGPFPGLLDLFGGIGGLVEYRASLLAV 182
Query: 691 KGFAVMALAYHNYEDLPKGIENVHLEYFEEAVNYLLSHPQVKGPGVGLLGISKGGELCLS 870
+GFAV+ALAY Y+DLPK +E V LEYFEEA N LL+HP+V+ PG+G++ +SKG E+ L+
Sbjct: 183 RGFAVLALAYFAYDDLPKQLEEVDLEYFEEAANLLLAHPKVQKPGIGVISVSKGAEIGLA 242
Query: 871 MASFLKSITATVVINASVANIGGTLHYKGETLPPLGTNPSRIKATKDGVADILHVLNSPL 1050
MA +LK + ATV IN + A L Y+ + P+ + P R++ G I H P
Sbjct: 243 MACYLKQVAATVCINGANAIHEFPLRYRDLVITPIPSFPERMQVNAAGAVRIRHFKGDPR 302
Query: 1051 EGPDQKSFIPVERAESAFLFLVGQDDHNWKSEFYANEASKRLQAHGKEKPQIICYPRAGH 1230
+ +Q S +PVE+A LF+VG+ D + S+ YA +A +L+ HGK +++ YP AGH
Sbjct: 303 DERNQHSVLPVEKARGPILFVVGEADECFNSKEYAEQALDQLRRHGKSSGRMLSYPGAGH 362
Query: 1231 YIEPPYFPLCRASLHVLVGRPVIWGGEPRAHAMAQVDAWQQLQTFFHKHLGGEKGTI 1401
IEPPY PLC S + P++WGGEP A AQ +WQ++ FF +HL + T+
Sbjct: 363 LIEPPYAPLCCVSWSRGLFLPMLWGGEPEGQAAAQEHSWQEILKFFRQHLVLSRSTL 419
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 59,524,740
Number of extensions: 1876536
Number of successful extensions: 7628
Number of sequences better than 1.0e-05: 11
Number of HSP's gapped: 7601
Number of HSP's successfully gapped: 11
Length of query: 503
Length of database: 17,681,374
Length adjustment: 106
Effective length of query: 397
Effective length of database: 14,174,046
Effective search space: 5627096262
Effective search space used: 5627096262
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002484
(1509 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_547892.2| PREDICTED: similar to Peroxisomal acyl-coenzyme... 706 0.0
Alignment gi|XP_547893.2| PREDICTED: similar to Peroxisomal acyl coenzyme... 572 e-163
Alignment gi|XP_538756.1| PREDICTED: similar to bile acid Coenzyme A: ami... 344 1e-94
Alignment gi|XP_547894.2| PREDICTED: similar to Cytosolic acyl coenzyme A... 335 9e-92
Alignment gi|XP_538757.2| PREDICTED: similar to bile acid Coenzyme A: ami... 331 1e-90
Alignment gi|XP_853386.1| PREDICTED: similar to bile acid Coenzyme A: ami... 330 3e-90
>ref|XP_547892.2| PREDICTED: similar to Peroxisomal acyl-coenzyme A thioester hydrolase
2a (Peroxisomal long-chain acyl-coA thioesterase 2)
(ZAP128) (CTE-Ia) [Canis familiaris].
Length = 445
Score = 706 bits (1822), Expect = 0.0
Identities = 356/457 (77%), Positives = 385/457 (84%)
Frame = +1
Query: 22 MVASYLALLRATRLYQVGHTSCGRLVGLPKLRTANPISWTPFRMAATVTLEPAGRCCWDE 201
MVAS A+LRA+ L + G LP+ P W R +ATV+LEPAG C WDE
Sbjct: 1 MVASAGAILRASGLRRWGF--------LPR----TPKLWAGARGSATVSLEPAGGCAWDE 48
Query: 202 PVRIAVRGLAPEQPVTLRASLRDEKGALFRAHARYCADTDGQLDLARAPALGGSFVGLEP 381
PVRI+VRGLAP QPVTLRASLRDE+GALFRAHARY AD G LDLARAPALGGSFVGLEP
Sbjct: 49 PVRISVRGLAPGQPVTLRASLRDERGALFRAHARYRADDRGLLDLARAPALGGSFVGLEP 108
Query: 382 MGLFWALEPEKPLLRLVKRDVQTPFAVELEVFDGHEPEGGRLLGRAVHERDFLPPGVRRE 561
MGL WALEPEKPL+RLVKRDVQTPFAVELEV DGHEP+ GRLLGRA+H R FL PGVRR
Sbjct: 109 MGLLWALEPEKPLVRLVKRDVQTPFAVELEVLDGHEPDAGRLLGRALHARHFLRPGVRRV 168
Query: 562 PVRAGRVRATXXXXXXXXXXXXIVDLFGAGGGLPEYRASLLAGKGFAVMALAYHNYEDLP 741
PVRAGRVR T IVD++G G GL EYRASLLAGKGFAVMALAYHNYEDLP
Sbjct: 169 PVRAGRVRGTLFLPPEPGPFPGIVDIYGVGSGLLEYRASLLAGKGFAVMALAYHNYEDLP 228
Query: 742 KGIENVHLEYFEEAVNYLLSHPQVKGPGVGLLGISKGGELCLSMASFLKSITATVVINAS 921
KG+E +HLEYFEEAVNYLL HPQVKG GVGLLG SKGGELCLSMASFLK ITA+V+IN S
Sbjct: 229 KGLEILHLEYFEEAVNYLLDHPQVKGLGVGLLGNSKGGELCLSMASFLKGITASVIINGS 288
Query: 922 VANIGGTLHYKGETLPPLGTNPSRIKATKDGVADILHVLNSPLEGPDQKSFIPVERAESA 1101
VAN+GGTLHYK E LPP+G + +R++ TKDG+ADIL VLNSPLEG DQKSFIPVERAESA
Sbjct: 289 VANVGGTLHYKDEILPPVGLDANRMRVTKDGLADILDVLNSPLEGADQKSFIPVERAESA 348
Query: 1102 FLFLVGQDDHNWKSEFYANEASKRLQAHGKEKPQIICYPRAGHYIEPPYFPLCRASLHVL 1281
FLFLVG DDHNWKSEFYANEASKRLQAHG+E+PQIICYP AGHYIEPPYFP+CRASLH L
Sbjct: 349 FLFLVGLDDHNWKSEFYANEASKRLQAHGREQPQIICYPMAGHYIEPPYFPMCRASLHTL 408
Query: 1282 VGRPVIWGGEPRAHAMAQVDAWQQLQTFFHKHLGGEK 1392
VG PVIWGGEPRAHAMAQ+DAW+QLQTFFHKHLGGEK
Sbjct: 409 VGGPVIWGGEPRAHAMAQMDAWKQLQTFFHKHLGGEK 445
>ref|XP_547893.2| PREDICTED: similar to Peroxisomal acyl coenzyme A thioester hydrolase
Ib (Peroxisomal long-chain acyl-coA thioesterase Ib)
(PTE-Ib) (PTE-2b) [Canis familiaris].
Length = 420
Score = 572 bits (1473), Expect = e-163
Identities = 282/418 (67%), Positives = 324/418 (77%)
Frame = +1
Query: 157 ATVTLEPAGRCCWDEPVRIAVRGLAPEQPVTLRASLRDEKGALFRAHARYCADTDGQLDL 336
ATV+LEPAGRC WDEPVRI+VRGLAP QPVTLRASLRDE+GALFRAHARY AD G LDL
Sbjct: 2 ATVSLEPAGRCAWDEPVRISVRGLAPGQPVTLRASLRDERGALFRAHARYRADDRGLLDL 61
Query: 337 ARAPALGGSFVGLEPMGLFWALEPEKPLLRLVKRDVQTPFAVELEVFDGHEPEGGRLLGR 516
ARAPALGGSFVGLEPMGL WALEPE P R VKRDVQTPFAVELEV DGHEP+ GRLLGR
Sbjct: 62 ARAPALGGSFVGLEPMGLLWALEPETPFWRFVKRDVQTPFAVELEVLDGHEPDAGRLLGR 121
Query: 517 AVHERDFLPPGVRREPVRAGRVRATXXXXXXXXXXXXIVDLFGAGGGLPEYRASLLAGKG 696
A+H R FL PGVRR PVRAGRVR T I+D+FG GGGL EYRASLLAG G
Sbjct: 122 ALHARHFLRPGVRRVPVRAGRVRGTLFLPPGPGPFPGIIDIFGIGGGLVEYRASLLAGHG 181
Query: 697 FAVMALAYHNYEDLPKGIENVHLEYFEEAVNYLLSHPQVKGPGVGLLGISKGGELCLSMA 876
FA ALAY+N+EDLPK I++V L+YFEEA+ Y+L H +VKGPG+GLLGIS G ++CLSMA
Sbjct: 182 FATFALAYYNFEDLPKEIDSVDLDYFEEALCYMLQHSEVKGPGIGLLGISLGADICLSMA 241
Query: 877 SFLKSITATVVINASVANIGGTLHYKGETLPPLGTNPSRIKATKDGVADILHVLNSPLEG 1056
SFLK+I+ATV IN S + + YK +PPLG + RIK G+ DI+ + N + G
Sbjct: 242 SFLKNISATVSINGSGFSGNKGIRYKQTFIPPLGHDLRRIKVAFSGILDIVDIRNDVVGG 301
Query: 1057 PDQKSFIPVERAESAFLFLVGQDDHNWKSEFYANEASKRLQAHGKEKPQIICYPRAGHYI 1236
+ S IP+E+A+ LF+VGQDDHNW+SE YA AS+RLQAHGKEKPQII YP GHYI
Sbjct: 302 HENPSMIPMEKAQGPILFIVGQDDHNWRSELYAQIASERLQAHGKEKPQIISYPGTGHYI 361
Query: 1237 EPPYFPLCRASLHVLVGRPVIWGGEPRAHAMAQVDAWQQLQTFFHKHLGGEKGTIPTK 1410
EPPYFP C AS+ L+ +PVIWGGEPRAH+ AQ DAW+Q+ TFF KHLGG + P K
Sbjct: 362 EPPYFPFCPASIQKLLNKPVIWGGEPRAHSKAQEDAWKQILTFFCKHLGGTQNIAPPK 419
>ref|XP_538756.1| PREDICTED: similar to bile acid Coenzyme A: amino acid
N-acyltransferase isoform 1 [Canis familiaris].
Length = 419
Score = 344 bits (882), Expect = 1e-94
Identities = 180/410 (43%), Positives = 257/410 (62%), Gaps = 4/410 (0%)
Frame = +1
Query: 163 VTLEPAGRCCWDEPVRIAVRGLAPEQPVTLRASLRDEKGALFRAHARYCADTDGQLDLAR 342
+T PA DEPV I V GL P Q VTL ASL+DEKG +F + A Y A+ G+LDL +
Sbjct: 4 LTATPASALA-DEPVHIRVTGLRPLQMVTLMASLKDEKGNVFWSRAFYKANEVGELDLMQ 62
Query: 343 APALGGSFVGLEPMGLFWALEPEKPLLRLVKRDVQ-TPFAVELEVFDG---HEPEGGRLL 510
PA GG +VG+ PMGLFW+L+P+K RL+K+DV +PF + L ++D + +++
Sbjct: 63 TPAFGGDYVGVHPMGLFWSLKPKKAFQRLLKKDVMNSPFWITLNLYDSVCFEDVITDQVM 122
Query: 511 GRAVHERDFLPPGVRREPVRAGRVRATXXXXXXXXXXXXIVDLFGAGGGLPEYRASLLAG 690
V +R F PG++R +R GRVR ++DLFG GGL E+RASLLA
Sbjct: 123 ASQVVQRWFSGPGLQRVQIREGRVRGALFLPPGEGPFPGVIDLFGGRGGLVEFRASLLAA 182
Query: 691 KGFAVMALAYHNYEDLPKGIENVHLEYFEEAVNYLLSHPQVKGPGVGLLGISKGGELCLS 870
+GFAV+ALAY YEDLP + + LEYFEEA N LL+HP+V+ PG+G++ +SKG E+ L+
Sbjct: 183 RGFAVLALAYFAYEDLPSDLLEIDLEYFEEAANLLLAHPKVQTPGIGVISVSKGAEIGLA 242
Query: 871 MASFLKSITATVVINASVANIGGTLHYKGETLPPLGTNPSRIKATKDGVADILHVLNSPL 1050
MA FLK + AT+ IN + A L YK + P+ T R++ G + H P
Sbjct: 243 MACFLKQVVATIWINGTNAIFEFPLRYKDTVITPIPTFVERMQLDISGAMRLRHYKGDPW 302
Query: 1051 EGPDQKSFIPVERAESAFLFLVGQDDHNWKSEFYANEASKRLQAHGKEKPQIICYPRAGH 1230
+ +Q+S +P+E+A + LF+VG++D S+ YA +A +L++HG+ +++ YP AGH
Sbjct: 303 DELNQQSVLPIEKALGSILFIVGENDECMNSKEYAEQALHQLRSHGRNNGRMLLYPGAGH 362
Query: 1231 YIEPPYFPLCRASLHVLVGRPVIWGGEPRAHAMAQVDAWQQLQTFFHKHL 1380
IEPPY PLC AS + P++WGG+P AHA AQ +W ++ FF +HL
Sbjct: 363 LIEPPYSPLCYASPNKNFSLPLLWGGDPAAHAAAQEHSWGEILKFFRQHL 412
>ref|XP_547894.2| PREDICTED: similar to Cytosolic acyl coenzyme A thioester
hydrolase, inducible (Long chain acyl-CoA thioester
hydrolase) (Long chain acyl-CoA hydrolase) (CTE-I)
(CTE-Ib) [Canis familiaris].
Length = 426
Score = 335 bits (858), Expect = 9e-92
Identities = 172/238 (72%), Positives = 192/238 (80%), Gaps = 2/238 (0%)
Frame = +1
Query: 103 LPKLRTANPISWTPFRMAATVTLEPAGRCCWDEPVRIAVRGLAPEQPVTLRASLRDEKGA 282
LP R+A RMAATV+LEPAGRC WDEPVRI+VRGLAP QPVTLRASLRDE+GA
Sbjct: 97 LPPQRSAE------IRMAATVSLEPAGRCAWDEPVRISVRGLAPGQPVTLRASLRDERGA 150
Query: 283 LFRAHARYCADTDGQLDLARAPALGGSFVGLEPMGLFWALEPEKPLLRLVKRDVQTPFAV 462
LFRAHARY AD G LDLARAPALGGSFVGLEPMGL WALEPEKPL+RLVKRDVQTPFAV
Sbjct: 151 LFRAHARYRADDRGLLDLARAPALGGSFVGLEPMGLLWALEPEKPLVRLVKRDVQTPFAV 210
Query: 463 ELEVFDGHEPEGGRLLGRAVHERDFLPPGVRREPVRAGRVRAT--XXXXXXXXXXXXIVD 636
ELEV DGHEP+ GRLLGRA+H R FL PGVRR PVRAGRVR T I+D
Sbjct: 211 ELEVLDGHEPDAGRLLGRALHARHFLRPGVRRVPVRAGRVRGTLFLPPGERAGPFPGIID 270
Query: 637 LFGAGGGLPEYRASLLAGKGFAVMALAYHNYEDLPKGIENVHLEYFEEAVNYLLSHPQ 810
L+G+GGGL EYRASLLAG GFA +ALAY +EDLP+ ++++ LEYFEEAVN++L HP+
Sbjct: 271 LYGSGGGLCEYRASLLAGHGFAALALAYFRFEDLPEYLDDLQLEYFEEAVNFMLQHPK 328
>ref|XP_538757.2| PREDICTED: similar to bile acid Coenzyme A: amino acid
N-acyltransferase [Canis familiaris].
Length = 422
Score = 331 bits (849), Expect = 1e-90
Identities = 179/401 (44%), Positives = 247/401 (61%), Gaps = 6/401 (1%)
Frame = +1
Query: 196 DEPVRIAVRGLAPEQPVTLRASLRDEKGALFRAHARYCADTDGQLDLARAPALGGSFVGL 375
DEPV I GL P Q V L+A+L+DE G LF +HA Y A+ G++DL RAP+LGG +VG+
Sbjct: 15 DEPVHIRATGLPPFQIVVLQATLKDETGNLFHSHAYYKANEVGEVDLERAPSLGGDYVGV 74
Query: 376 EPMGLFWALEPEKPLLRLVKRDVQ-TPFAVELEVFDG-----HEPEGGRLLGRAVHERDF 537
PMGLFW+L+PE L +L+KRDV +PF V+++++D H P + + ER +
Sbjct: 75 HPMGLFWSLKPENILTKLLKRDVMNSPFLVQIKLYDSNLPLIHIPTTAPKVSLTL-ERWY 133
Query: 538 LPPGVRREPVRAGRVRATXXXXXXXXXXXXIVDLFGAGGGLPEYRASLLAGKGFAVMALA 717
PG +R VR G +R T ++DLF GGL E RASLLA GFA +ALA
Sbjct: 134 TAPGTKRIQVREGHIRGTLFLPPGEGRFPGVIDLFAGVGGLIESRASLLASHGFATLALA 193
Query: 718 YHNYEDLPKGIENVHLEYFEEAVNYLLSHPQVKGPGVGLLGISKGGELCLSMASFLKSIT 897
Y +YEDLP E LEYFEEAVN+LL HP+V GPGVG++ ISKG E+ LSMA LK +T
Sbjct: 194 YCDYEDLPSQPEKTDLEYFEEAVNFLLRHPKVLGPGVGIVSISKGAEIGLSMAIHLKQVT 253
Query: 898 ATVVINASVANIGGTLHYKGETLPPLGTNPSRIKATKDGVADILHVLNSPLEGPDQKSFI 1077
ATV+IN I Y+G+ PL +P + G+A+ H ++ +
Sbjct: 254 ATVLINGPNFVIRIPQVYRGQISQPLPFSPQLLSINALGLAEFQHNFEEARNEANENFLL 313
Query: 1078 PVERAESAFLFLVGQDDHNWKSEFYANEASKRLQAHGKEKPQIICYPRAGHYIEPPYFPL 1257
P+E+A+ FLF+VG+DD N S+ YA +A+++L+ +GK ++ YP AGH +E PY PL
Sbjct: 314 PIEKAQGHFLFIVGEDDKNLNSKAYAKQATEQLRRNGKNNWTLLSYPGAGHLLEAPYSPL 373
Query: 1258 CRASLHVLVGRPVIWGGEPRAHAMAQVDAWQQLQTFFHKHL 1380
C AS + + WGGE HA+AQ +W++++ F KHL
Sbjct: 374 CCASKISSLHLFIHWGGEVTPHAIAQEHSWKEIKKFLRKHL 414
>ref|XP_853386.1| PREDICTED: similar to bile acid Coenzyme A: amino acid
N-acyltransferase isoform 2 [Canis familiaris].
Length = 404
Score = 330 bits (845), Expect = 3e-90
Identities = 178/410 (43%), Positives = 253/410 (61%), Gaps = 4/410 (0%)
Frame = +1
Query: 163 VTLEPAGRCCWDEPVRIAVRGLAPEQPVTLRASLRDEKGALFRAHARYCADTDGQLDLAR 342
+T PA DEPV I V GL P Q VTL ASL+DEKG +F + A Y A+ G+LDL +
Sbjct: 4 LTATPASALA-DEPVHIRVTGLRPLQMVTLMASLKDEKGNVFWSRAFYKANEVGELDLMQ 62
Query: 343 APALGGSFVGLEPMGLFWALEPEKPLLRLVKRDVQ-TPFAVELEVFDG---HEPEGGRLL 510
PA GG +VG+ PMGLFW+L+P+K RL+K+DV +PF + L ++D + +++
Sbjct: 63 TPAFGGDYVGVHPMGLFWSLKPKKAFQRLLKKDVMNSPFWITLNLYDSVCFEDVITDQVM 122
Query: 511 GRAVHERDFLPPGVRREPVRAGRVRATXXXXXXXXXXXXIVDLFGAGGGLPEYRASLLAG 690
V +R F PG++R +R GRVR LF GGL E+RASLLA
Sbjct: 123 ASQVVQRWFSGPGLQRVQIREGRVRGA---------------LFLPPGGLVEFRASLLAA 167
Query: 691 KGFAVMALAYHNYEDLPKGIENVHLEYFEEAVNYLLSHPQVKGPGVGLLGISKGGELCLS 870
+GFAV+ALAY YEDLP + + LEYFEEA N LL+HP+V+ PG+G++ +SKG E+ L+
Sbjct: 168 RGFAVLALAYFAYEDLPSDLLEIDLEYFEEAANLLLAHPKVQTPGIGVISVSKGAEIGLA 227
Query: 871 MASFLKSITATVVINASVANIGGTLHYKGETLPPLGTNPSRIKATKDGVADILHVLNSPL 1050
MA FLK + AT+ IN + A L YK + P+ T R++ G + H P
Sbjct: 228 MACFLKQVVATIWINGTNAIFEFPLRYKDTVITPIPTFVERMQLDISGAMRLRHYKGDPW 287
Query: 1051 EGPDQKSFIPVERAESAFLFLVGQDDHNWKSEFYANEASKRLQAHGKEKPQIICYPRAGH 1230
+ +Q+S +P+E+A + LF+VG++D S+ YA +A +L++HG+ +++ YP AGH
Sbjct: 288 DELNQQSVLPIEKALGSILFIVGENDECMNSKEYAEQALHQLRSHGRNNGRMLLYPGAGH 347
Query: 1231 YIEPPYFPLCRASLHVLVGRPVIWGGEPRAHAMAQVDAWQQLQTFFHKHL 1380
IEPPY PLC AS + P++WGG+P AHA AQ +W ++ FF +HL
Sbjct: 348 LIEPPYSPLCYASPNKNFSLPLLWGGDPAAHAAAQEHSWGEILKFFRQHL 397
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 62,186,775
Number of extensions: 1940207
Number of successful extensions: 7726
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 7664
Number of HSP's successfully gapped: 6
Length of query: 503
Length of database: 18,874,504
Length adjustment: 107
Effective length of query: 396
Effective length of database: 15,307,552
Effective search space: 6061790592
Effective search space used: 6061790592
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002484
(1509 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_006812.3| acyl-coenzyme A thioesterase 2, mitochondrial [... 748 0.0
Alignment gi|NP_001032238.1| acyl-coenzyme A thioesterase 1 [Homo sapiens]. 723 0.0
Alignment gi|NP_689544.3| acyl-coenzyme A thioesterase 4 [Homo sapiens]. 578 e-165
Alignment gi|NP_001121082.1| bile acid-CoA:amino acid N-acyltransferase [... 313 4e-85
Alignment gi|NP_001692.1| bile acid-CoA:amino acid N-acyltransferase [Hom... 313 4e-85
Alignment gi|NP_001032239.1| putative acyl-coenzyme A thioesterase 6 [Hom... 261 9e-70
>ref|NP_006812.3| acyl-coenzyme A thioesterase 2, mitochondrial [Homo sapiens].
Length = 483
Score = 748 bits (1932), Expect = 0.0
Identities = 368/462 (79%), Positives = 397/462 (85%)
Frame = +1
Query: 25 VASYLALLRATRLYQVGHTSCGRLVGLPKLRTANPISWTPFRMAATVTLEPAGRCCWDEP 204
+AS A+LRA+RLYQ S + +G P+LR I P RMAAT+ LEPAGRCCWDEP
Sbjct: 21 MASSPAVLRASRLYQWSLKSSAQFLGSPQLRQVGQIIRVPARMAATLILEPAGRCCWDEP 80
Query: 205 VRIAVRGLAPEQPVTLRASLRDEKGALFRAHARYCADTDGQLDLARAPALGGSFVGLEPM 384
VRIAVRGLAPEQPVTLRASLRDEKGALF+AHARY ADT G+LDL RAPALGGSF GLEPM
Sbjct: 81 VRIAVRGLAPEQPVTLRASLRDEKGALFQAHARYRADTLGELDLERAPALGGSFAGLEPM 140
Query: 385 GLFWALEPEKPLLRLVKRDVQTPFAVELEVFDGHEPEGGRLLGRAVHERDFLPPGVRREP 564
GL WALEPEKPL+RLVKRDV+TP AVELEV DGH+P+ GRLL + HER FLPPGVRREP
Sbjct: 141 GLLWALEPEKPLVRLVKRDVRTPLAVELEVLDGHDPDPGRLLCQTRHERYFLPPGVRREP 200
Query: 565 VRAGRVRATXXXXXXXXXXXXIVDLFGAGGGLPEYRASLLAGKGFAVMALAYHNYEDLPK 744
VR GRVR T IVD+FG GGGL EYRASLLAGKGFAVMALAY+NYEDLPK
Sbjct: 201 VRVGRVRGTLFLPPEPGPFPGIVDMFGTGGGLLEYRASLLAGKGFAVMALAYYNYEDLPK 260
Query: 745 GIENVHLEYFEEAVNYLLSHPQVKGPGVGLLGISKGGELCLSMASFLKSITATVVINASV 924
+E +HLEYFEEA+NYLLSHP+VKGPGVGLLGISKGGELCLSMASFLK ITA VVIN SV
Sbjct: 261 TMETLHLEYFEEAMNYLLSHPEVKGPGVGLLGISKGGELCLSMASFLKGITAAVVINGSV 320
Query: 925 ANIGGTLHYKGETLPPLGTNPSRIKATKDGVADILHVLNSPLEGPDQKSFIPVERAESAF 1104
AN+GGTLHYKGETLPP+G N +RIK TKDG ADI+ VLNSPLEGPDQKSFIPVERAES F
Sbjct: 321 ANVGGTLHYKGETLPPVGVNRNRIKVTKDGYADIVDVLNSPLEGPDQKSFIPVERAESTF 380
Query: 1105 LFLVGQDDHNWKSEFYANEASKRLQAHGKEKPQIICYPRAGHYIEPPYFPLCRASLHVLV 1284
LFLVGQDDHNWKSEFYANEA KRLQAHG+ KPQIICYP GHYIEPPYFPLCRASLH LV
Sbjct: 381 LFLVGQDDHNWKSEFYANEACKRLQAHGRRKPQIICYPETGHYIEPPYFPLCRASLHALV 440
Query: 1285 GRPVIWGGEPRAHAMAQVDAWQQLQTFFHKHLGGEKGTIPTK 1410
G P+IWGGEPRAHAMAQVDAW+QLQTFFHKHLGG +GTIP+K
Sbjct: 441 GSPIIWGGEPRAHAMAQVDAWKQLQTFFHKHLGGHEGTIPSK 482
>ref|NP_001032238.1| acyl-coenzyme A thioesterase 1 [Homo sapiens].
Length = 421
Score = 723 bits (1865), Expect = 0.0
Identities = 352/420 (83%), Positives = 373/420 (88%)
Frame = +1
Query: 151 MAATVTLEPAGRCCWDEPVRIAVRGLAPEQPVTLRASLRDEKGALFRAHARYCADTDGQL 330
MAAT+ LEPAGRCCWDEPVRIAVRGLAPEQPVTLRASLRDEKGALF+AHARY ADT G+L
Sbjct: 1 MAATLILEPAGRCCWDEPVRIAVRGLAPEQPVTLRASLRDEKGALFQAHARYRADTLGEL 60
Query: 331 DLARAPALGGSFVGLEPMGLFWALEPEKPLLRLVKRDVQTPFAVELEVFDGHEPEGGRLL 510
DL RAPALGGSF GLEPMGL WALEPEKPL+RLVKRDV+TP AVELEV DGH+P+ GRLL
Sbjct: 61 DLERAPALGGSFAGLEPMGLLWALEPEKPLVRLVKRDVRTPLAVELEVLDGHDPDPGRLL 120
Query: 511 GRAVHERDFLPPGVRREPVRAGRVRATXXXXXXXXXXXXIVDLFGAGGGLPEYRASLLAG 690
R HER FLPPGVRREPVRAGRVR T IVD+FG GGGL EYRASLLAG
Sbjct: 121 CRVRHERYFLPPGVRREPVRAGRVRGTLFLPPEPGPFPGIVDMFGTGGGLLEYRASLLAG 180
Query: 691 KGFAVMALAYHNYEDLPKGIENVHLEYFEEAVNYLLSHPQVKGPGVGLLGISKGGELCLS 870
KGFAVMALAY+NYEDLPK +E +HLEYFEEAVNYLLSHP+VKGPGVGLLGISKGGELCLS
Sbjct: 181 KGFAVMALAYYNYEDLPKTMETLHLEYFEEAVNYLLSHPEVKGPGVGLLGISKGGELCLS 240
Query: 871 MASFLKSITATVVINASVANIGGTLHYKGETLPPLGTNPSRIKATKDGVADILHVLNSPL 1050
MASFLK ITA VVIN SVAN+GGTL YKGETLPP+G N +RIK TKDG ADI+ VLNSPL
Sbjct: 241 MASFLKGITAAVVINGSVANVGGTLRYKGETLPPVGVNRNRIKVTKDGYADIVDVLNSPL 300
Query: 1051 EGPDQKSFIPVERAESAFLFLVGQDDHNWKSEFYANEASKRLQAHGKEKPQIICYPRAGH 1230
EGPDQKSFIPVERAES FLFLVGQDDHNWKSEFYANEA KRLQAHG+ KPQIICYP GH
Sbjct: 301 EGPDQKSFIPVERAESTFLFLVGQDDHNWKSEFYANEACKRLQAHGRRKPQIICYPETGH 360
Query: 1231 YIEPPYFPLCRASLHVLVGRPVIWGGEPRAHAMAQVDAWQQLQTFFHKHLGGEKGTIPTK 1410
YIEPPYFPLCRASLH LVG P+IWGGEPRAHAMAQVDAW+QLQTFFHKHLGG +GTIP+K
Sbjct: 361 YIEPPYFPLCRASLHALVGSPIIWGGEPRAHAMAQVDAWKQLQTFFHKHLGGHEGTIPSK 420
>ref|NP_689544.3| acyl-coenzyme A thioesterase 4 [Homo sapiens].
Length = 421
Score = 578 bits (1491), Expect = e-165
Identities = 281/420 (66%), Positives = 327/420 (77%)
Frame = +1
Query: 151 MAATVTLEPAGRCCWDEPVRIAVRGLAPEQPVTLRASLRDEKGALFRAHARYCADTDGQL 330
M+AT+ LEP GRCCW+EPVRIAVRGLAPEQ VTLRASLRDEKGALFRAHARYCAD G+L
Sbjct: 1 MSATLILEPPGRCCWNEPVRIAVRGLAPEQRVTLRASLRDEKGALFRAHARYCADARGEL 60
Query: 331 DLARAPALGGSFVGLEPMGLFWALEPEKPLLRLVKRDVQTPFAVELEVFDGHEPEGGRLL 510
DL RAPALGGSF GLEPMGL WALEPEKP R +KRDVQ PF VELEV DGH+PE GRLL
Sbjct: 61 DLERAPALGGSFAGLEPMGLLWALEPEKPFWRFLKRDVQIPFVVELEVLDGHDPEPGRLL 120
Query: 511 GRAVHERDFLPPGVRREPVRAGRVRATXXXXXXXXXXXXIVDLFGAGGGLPEYRASLLAG 690
+A HER FLPPGVRR+ VRAGRVRAT I+D+FG GGGL EYRASLLAG
Sbjct: 121 CQAQHERHFLPPGVRRQSVRAGRVRATLFLPPGPGPFPGIIDIFGIGGGLLEYRASLLAG 180
Query: 691 KGFAVMALAYHNYEDLPKGIENVHLEYFEEAVNYLLSHPQVKGPGVGLLGISKGGELCLS 870
GFA +ALAY+N+EDLP ++N+ LEYFEEAV Y+L HPQVKGPG+GLLGIS G ++CLS
Sbjct: 181 HGFATLALAYYNFEDLPNNMDNISLEYFEEAVCYMLQHPQVKGPGIGLLGISLGADICLS 240
Query: 871 MASFLKSITATVVINASVANIGGTLHYKGETLPPLGTNPSRIKATKDGVADILHVLNSPL 1050
MASFLK+++ATV IN S + ++YK ++PPLG + RIK G+ DI+ + N+ +
Sbjct: 241 MASFLKNVSATVSINGSGISGNTAINYKHSSIPPLGYDLRRIKVAFSGLVDIVDIRNALV 300
Query: 1051 EGPDQKSFIPVERAESAFLFLVGQDDHNWKSEFYANEASKRLQAHGKEKPQIICYPRAGH 1230
G S IP+E+A+ L +VGQDDHNW+SE YA S+RLQAHGKEKPQIICYP GH
Sbjct: 301 GGYKNPSMIPIEKAQGPILLIVGQDDHNWRSELYAQTVSERLQAHGKEKPQIICYPGTGH 360
Query: 1231 YIEPPYFPLCRASLHVLVGRPVIWGGEPRAHAMAQVDAWQQLQTFFHKHLGGEKGTIPTK 1410
YIEPPYFPLC ASLH L+ + VIWGGEPRAH+ AQ DAW+Q+ FF KHLGG + T K
Sbjct: 361 YIEPPYFPLCPASLHRLLNKHVIWGGEPRAHSKAQEDAWKQILAFFCKHLGGTQKTAVPK 420
>ref|NP_001121082.1| bile acid-CoA:amino acid N-acyltransferase [Homo sapiens].
Length = 418
Score = 313 bits (801), Expect = 4e-85
Identities = 179/406 (44%), Positives = 241/406 (59%), Gaps = 11/406 (2%)
Frame = +1
Query: 196 DEPVRIAVRGLAPEQPVTLRASLRDEKGALFRAHARYCADTDGQLDLARAPALGGSFVGL 375
DEPV I GL P Q V+ +ASL DE G +F + A Y A+ G++DL A +LGG ++G+
Sbjct: 14 DEPVHIRATGLIPFQMVSFQASLEDENGDMFYSQAHYRANEFGEVDLNHASSLGGDYMGV 73
Query: 376 EPMGLFWALEPEKPLLRLVKRDVQT-PFAVELEVFD---------GHEPEGGRLLGRAVH 525
PMGLFW+L+PEK L RL+KRDV PF V+++++D P+ L
Sbjct: 74 HPMGLFWSLKPEKLLTRLLKRDVMNRPFQVQVKLYDLELIVNNKVASAPKASLTL----- 128
Query: 526 ERDFLPPGVRREPVRAGRVRATXXXXXXXXXXXXIVDLFGAGGGLPEYRASLLAGKGFAV 705
ER ++ PGV R VR GR+R ++DLFG GGL E+RASLLA +GFA
Sbjct: 129 ERWYVAPGVTRIKVREGRLRGALFLPPGEGLFPGVIDLFGGLGGLLEFRASLLASRGFAS 188
Query: 706 MALAYHNYEDLPKGIENVHLEYFEEAVNYLLSHPQVKGPGVGLLGISKGGELCLSMASFL 885
+ALAYHNYEDLP+ E LEYFEEA N+LL HP+V G GVG++ + +G ++ LSMA +L
Sbjct: 189 LALAYHNYEDLPRKPEVTDLEYFEEAANFLLRHPKVFGSGVGVVSVCQGVQIGLSMAIYL 248
Query: 886 KSITATVVINASVANIGGTLHYKGETLPPLGTNPSRIKATKDGVADILHVLNSPLEGPDQ 1065
K +TATV+IN + G Y G+ PL + I G+ ++ + G Q
Sbjct: 249 KQVTATVLINGTNFPFGIPQVYHGQIHQPLPHSAQLISTNALGLLELYRTFETTQVGASQ 308
Query: 1066 KSFIPVERAESAFLFLVGQDDHNWKSEFYANEASKRLQAHGKEKPQIICYPRAGHYIEPP 1245
F P+E A+ FLF+VG+ D S+ +A +A +L+ HGK ++ YP AGH IEPP
Sbjct: 309 YLF-PIEEAQGQFLFIVGEGDKTINSKAHAEQAIGQLKRHGKNNWTLLSYPGAGHLIEPP 367
Query: 1246 YFPLCRAS-LHVLVGRPVIWGGEPRAHAMAQVDAWQQLQTFFHKHL 1380
Y PLC AS H L + WGGE HA AQ AW+++Q F KHL
Sbjct: 368 YSPLCCASTTHDL---RLHWGGEVIPHAAAQEHAWKEIQRFLRKHL 410
>ref|NP_001692.1| bile acid-CoA:amino acid N-acyltransferase [Homo sapiens].
Length = 418
Score = 313 bits (801), Expect = 4e-85
Identities = 179/406 (44%), Positives = 241/406 (59%), Gaps = 11/406 (2%)
Frame = +1
Query: 196 DEPVRIAVRGLAPEQPVTLRASLRDEKGALFRAHARYCADTDGQLDLARAPALGGSFVGL 375
DEPV I GL P Q V+ +ASL DE G +F + A Y A+ G++DL A +LGG ++G+
Sbjct: 14 DEPVHIRATGLIPFQMVSFQASLEDENGDMFYSQAHYRANEFGEVDLNHASSLGGDYMGV 73
Query: 376 EPMGLFWALEPEKPLLRLVKRDVQT-PFAVELEVFD---------GHEPEGGRLLGRAVH 525
PMGLFW+L+PEK L RL+KRDV PF V+++++D P+ L
Sbjct: 74 HPMGLFWSLKPEKLLTRLLKRDVMNRPFQVQVKLYDLELIVNNKVASAPKASLTL----- 128
Query: 526 ERDFLPPGVRREPVRAGRVRATXXXXXXXXXXXXIVDLFGAGGGLPEYRASLLAGKGFAV 705
ER ++ PGV R VR GR+R ++DLFG GGL E+RASLLA +GFA
Sbjct: 129 ERWYVAPGVTRIKVREGRLRGALFLPPGEGLFPGVIDLFGGLGGLLEFRASLLASRGFAS 188
Query: 706 MALAYHNYEDLPKGIENVHLEYFEEAVNYLLSHPQVKGPGVGLLGISKGGELCLSMASFL 885
+ALAYHNYEDLP+ E LEYFEEA N+LL HP+V G GVG++ + +G ++ LSMA +L
Sbjct: 189 LALAYHNYEDLPRKPEVTDLEYFEEAANFLLRHPKVFGSGVGVVSVCQGVQIGLSMAIYL 248
Query: 886 KSITATVVINASVANIGGTLHYKGETLPPLGTNPSRIKATKDGVADILHVLNSPLEGPDQ 1065
K +TATV+IN + G Y G+ PL + I G+ ++ + G Q
Sbjct: 249 KQVTATVLINGTNFPFGIPQVYHGQIHQPLPHSAQLISTNALGLLELYRTFETTQVGASQ 308
Query: 1066 KSFIPVERAESAFLFLVGQDDHNWKSEFYANEASKRLQAHGKEKPQIICYPRAGHYIEPP 1245
F P+E A+ FLF+VG+ D S+ +A +A +L+ HGK ++ YP AGH IEPP
Sbjct: 309 YLF-PIEEAQGQFLFIVGEGDKTINSKAHAEQAIGQLKRHGKNNWTLLSYPGAGHLIEPP 367
Query: 1246 YFPLCRAS-LHVLVGRPVIWGGEPRAHAMAQVDAWQQLQTFFHKHL 1380
Y PLC AS H L + WGGE HA AQ AW+++Q F KHL
Sbjct: 368 YSPLCCASTTHDL---RLHWGGEVIPHAAAQEHAWKEIQRFLRKHL 410
>ref|NP_001032239.1| putative acyl-coenzyme A thioesterase 6 [Homo sapiens].
Length = 207
Score = 261 bits (668), Expect = 9e-70
Identities = 121/206 (58%), Positives = 154/206 (74%)
Frame = +1
Query: 793 LLSHPQVKGPGVGLLGISKGGELCLSMASFLKSITATVVINASVANIGGTLHYKGETLPP 972
+L HP+VKGP + LLG SKGG+LCLSMASFLK ITATV+INA VAN LHYK +P
Sbjct: 1 MLQHPKVKGPSIALLGFSKGGDLCLSMASFLKGITATVLINACVANTVAPLHYKDMIIPK 60
Query: 973 LGTNPSRIKATKDGVADILHVLNSPLEGPDQKSFIPVERAESAFLFLVGQDDHNWKSEFY 1152
L + ++K TK G + ++PLE + +S +P+E+A+ FLF+VG DD +WKSEFY
Sbjct: 61 LVDDLGKVKITKSGFLTFMDTWSNPLEEHNHQSLVPLEKAQVPFLFIVGMDDQSWKSEFY 120
Query: 1153 ANEASKRLQAHGKEKPQIICYPRAGHYIEPPYFPLCRASLHVLVGRPVIWGGEPRAHAMA 1332
A AS+RLQAHGKE+PQIICYP GH I+PPYFP RAS+H ++G + +GGEP+AH+ A
Sbjct: 121 AQIASERLQAHGKERPQIICYPETGHCIDPPYFPPSRASVHAVLGEAIFYGGEPKAHSKA 180
Query: 1333 QVDAWQQLQTFFHKHLGGEKGTIPTK 1410
QVDAWQQ+QTFFHKHL G+K +K
Sbjct: 181 QVDAWQQIQTFFHKHLNGKKSVKHSK 206
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 60,782,578
Number of extensions: 1885619
Number of successful extensions: 7447
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 7412
Number of HSP's successfully gapped: 6
Length of query: 503
Length of database: 18,297,164
Length adjustment: 107
Effective length of query: 396
Effective length of database: 14,770,016
Effective search space: 5848926336
Effective search space used: 5848926336
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002484
(1509 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_599007.1| acyl-coenzyme A thioesterase 3 [Mus musculus]. 657 0.0
Alignment gi|NP_598949.3| acyl-coenzyme A thioesterase 2, mitochondrial p... 649 0.0
Alignment gi|NP_663419.3| acyl-coenzyme A thioesterase 5 [Mus musculus]. 630 0.0
Alignment gi|NP_036136.1| acyl-coenzyme A thioesterase 1 [Mus musculus]. 625 e-179
Alignment gi|NP_766168.1| acyl-coenzyme A thioesterase 6 [Mus musculus]. 532 e-151
Alignment gi|NP_599008.3| acyl-coenzyme A thioesterase 4 [Mus musculus]. 531 e-151
Alignment gi|NP_001158037.1| acyl-coenzyme A amino acid N-acyltransferase... 326 3e-89
Alignment gi|NP_031545.2| bile acid-CoA:amino acid N-acyltransferase [Mus... 323 2e-88
Alignment gi|NP_663343.2| acyl-coenzyme A amino acid N-acyltransferase 2 ... 316 3e-86
>ref|NP_599007.1| acyl-coenzyme A thioesterase 3 [Mus musculus].
Length = 432
Score = 657 bits (1696), Expect = 0.0
Identities = 320/423 (75%), Positives = 356/423 (84%)
Frame = +1
Query: 142 PFRMAATVTLEPAGRCCWDEPVRIAVRGLAPEQPVTLRASLRDEKGALFRAHARYCADTD 321
P RMA TV LEPAG C D+PV IAVRGLAPEQPVTLR+ LRDEKGALFRAHARY AD+
Sbjct: 9 PNRMAPTVILEPAGGCLCDQPVHIAVRGLAPEQPVTLRSVLRDEKGALFRAHARYRADSH 68
Query: 322 GQLDLARAPALGGSFVGLEPMGLFWALEPEKPLLRLVKRDVQTPFAVELEVFDGHEPEGG 501
G+LDLAR PALGGSF GLEPMGL WA+EP++P RL+KRDVQTPF VELEV DGHEP+GG
Sbjct: 69 GELDLARTPALGGSFSGLEPMGLLWAMEPDRPFWRLIKRDVQTPFVVELEVLDGHEPDGG 128
Query: 502 RLLGRAVHERDFLPPGVRREPVRAGRVRATXXXXXXXXXXXXIVDLFGAGGGLPEYRASL 681
+ L RAVHER F+ PGVRR PVR GRVRAT I+DLFG G GL EYRASL
Sbjct: 129 QRLARAVHERHFMAPGVRRVPVREGRVRATLFLPPGTGPFPGIIDLFGIGSGLLEYRASL 188
Query: 682 LAGKGFAVMALAYHNYEDLPKGIENVHLEYFEEAVNYLLSHPQVKGPGVGLLGISKGGEL 861
LAGKGFAVMALAY+NYEDLPK ++ +HLEYFEEAV YLLSHPQV G GVG+LGISKGGEL
Sbjct: 189 LAGKGFAVMALAYNNYEDLPKDMDIIHLEYFEEAVTYLLSHPQVTGSGVGVLGISKGGEL 248
Query: 862 CLSMASFLKSITATVVINASVANIGGTLHYKGETLPPLGTNPSRIKATKDGVADILHVLN 1041
+MASFLK+ITA V+IN S++NIGG L YK ET+P +G N R+K TKDG+ DI+ +LN
Sbjct: 249 GFAMASFLKNITAAVIINGSISNIGGNLQYKDETVPSVGINTKRVKRTKDGLKDIVDLLN 308
Query: 1042 SPLEGPDQKSFIPVERAESAFLFLVGQDDHNWKSEFYANEASKRLQAHGKEKPQIICYPR 1221
+PLEGPDQKS IPVER+++AFLFLVGQDDHNWKSEFYA EASKRLQAHGKEKPQIICYP
Sbjct: 309 NPLEGPDQKSLIPVERSDTAFLFLVGQDDHNWKSEFYAREASKRLQAHGKEKPQIICYPE 368
Query: 1222 AGHYIEPPYFPLCRASLHVLVGRPVIWGGEPRAHAMAQVDAWQQLQTFFHKHLGGEKGTI 1401
GH+IEPPYFPLC+ASL+ LVG PVIWGGEPRAHAMAQVDAWQQLQTFFH HL G+K TI
Sbjct: 369 TGHHIEPPYFPLCKASLNSLVGGPVIWGGEPRAHAMAQVDAWQQLQTFFHNHLDGKKKTI 428
Query: 1402 PTK 1410
P K
Sbjct: 429 PAK 431
>ref|NP_598949.3| acyl-coenzyme A thioesterase 2, mitochondrial precursor [Mus
musculus].
Length = 453
Score = 649 bits (1675), Expect = 0.0
Identities = 323/456 (70%), Positives = 369/456 (80%)
Frame = +1
Query: 22 MVASYLALLRATRLYQVGHTSCGRLVGLPKLRTANPISWTPFRMAATVTLEPAGRCCWDE 201
MVAS A+LRA+RL Q S RL P L T +W R AT+++EP GR CWDE
Sbjct: 1 MVASSFAVLRASRLCQQDWKSWARLFVPPPLSTGGRTTWA--RTNATLSVEPEGRSCWDE 58
Query: 202 PVRIAVRGLAPEQPVTLRASLRDEKGALFRAHARYCADTDGQLDLARAPALGGSFVGLEP 381
P+ IAVRGLAPEQPVTLR++LRDEKGALFRAHARY AD G+L+LARAPALGGSF GLEP
Sbjct: 59 PLSIAVRGLAPEQPVTLRSALRDEKGALFRAHARYRADAGGELNLARAPALGGSFSGLEP 118
Query: 382 MGLFWALEPEKPLLRLVKRDVQTPFAVELEVFDGHEPEGGRLLGRAVHERDFLPPGVRRE 561
MGL WA+EPE+PL RL+KRDVQTPF VELEV DGHEP+GG+ L +AVHER FL PGVRR
Sbjct: 119 MGLLWAMEPERPLWRLIKRDVQTPFLVELEVLDGHEPDGGQRLAQAVHERHFLAPGVRRV 178
Query: 562 PVRAGRVRATXXXXXXXXXXXXIVDLFGAGGGLPEYRASLLAGKGFAVMALAYHNYEDLP 741
PVR GRVRAT I+DLFG GGGL EYRASLLAGKGFAVMALAY+NY+DLP
Sbjct: 179 PVREGRVRATLFLPPEPGPFPGIIDLFGVGGGLLEYRASLLAGKGFAVMALAYYNYDDLP 238
Query: 742 KGIENVHLEYFEEAVNYLLSHPQVKGPGVGLLGISKGGELCLSMASFLKSITATVVINAS 921
K IE +H+EYFEEAVNYL SHP+VKGPG+GLLGISKGGEL L+MASFLK ITA VVIN S
Sbjct: 239 KSIETMHMEYFEEAVNYLRSHPEVKGPGIGLLGISKGGELGLAMASFLKGITAAVVINGS 298
Query: 922 VANIGGTLHYKGETLPPLGTNPSRIKATKDGVADILHVLNSPLEGPDQKSFIPVERAESA 1101
VA +G T+ YK ET+PP+ +++K TKDG+ D++ L SPL D+KSFIPVER+++
Sbjct: 299 VAAVGNTISYKDETIPPVSLLRNQVKMTKDGLLDVVEALQSPL--VDKKSFIPVERSDTT 356
Query: 1102 FLFLVGQDDHNWKSEFYANEASKRLQAHGKEKPQIICYPRAGHYIEPPYFPLCRASLHVL 1281
FLFLVGQDDHNWKSEFYA+E SKRLQAHGKEKPQIICYP AGHYIEPPYFPLC A +H+L
Sbjct: 357 FLFLVGQDDHNWKSEFYADEISKRLQAHGKEKPQIICYPAAGHYIEPPYFPLCSAGMHLL 416
Query: 1282 VGRPVIWGGEPRAHAMAQVDAWQQLQTFFHKHLGGE 1389
VG + +GGEPRAHA+AQVDAWQQLQTFFHK LG +
Sbjct: 417 VGANITFGGEPRAHAVAQVDAWQQLQTFFHKQLGSK 452
>ref|NP_663419.3| acyl-coenzyme A thioesterase 5 [Mus musculus].
Length = 421
Score = 630 bits (1625), Expect = 0.0
Identities = 307/420 (73%), Positives = 343/420 (81%)
Frame = +1
Query: 151 MAATVTLEPAGRCCWDEPVRIAVRGLAPEQPVTLRASLRDEKGALFRAHARYCADTDGQL 330
M TV+LEP G CWDEP+ IAVRGLAPEQPVTLR +LRDEKGALFRAHARY AD+ G+L
Sbjct: 1 MVPTVSLEPTGHSCWDEPLSIAVRGLAPEQPVTLRTALRDEKGALFRAHARYRADSHGEL 60
Query: 331 DLARAPALGGSFVGLEPMGLFWALEPEKPLLRLVKRDVQTPFAVELEVFDGHEPEGGRLL 510
DLAR PALGGSF GLEPMGL WA+EP++P RL+KRDVQTPF VELEV DGHEP+GGRLL
Sbjct: 61 DLARTPALGGSFSGLEPMGLLWAMEPDRPFWRLIKRDVQTPFVVELEVLDGHEPDGGRLL 120
Query: 511 GRAVHERDFLPPGVRREPVRAGRVRATXXXXXXXXXXXXIVDLFGAGGGLPEYRASLLAG 690
RAVHER F+ PGVRR PVR GRVRAT I+DLFG GGGL EYRASLLAG
Sbjct: 121 ARAVHERHFMAPGVRRVPVREGRVRATLFLPPGTGPFPGIIDLFGVGGGLLEYRASLLAG 180
Query: 691 KGFAVMALAYHNYEDLPKGIENVHLEYFEEAVNYLLSHPQVKGPGVGLLGISKGGELCLS 870
KGFAVMALAY+ Y+DLPK I+ +HLEYFEEAV YLLSHPQVKGPGVGLLGISKG EL LS
Sbjct: 181 KGFAVMALAYYKYDDLPKVIDILHLEYFEEAVTYLLSHPQVKGPGVGLLGISKGAELSLS 240
Query: 871 MASFLKSITATVVINASVANIGGTLHYKGETLPPLGTNPSRIKATKDGVADILHVLNSPL 1050
MASFLK ITA VVIN + N+ TL+YK E+LP LG + RIK TKDG DI+ +LN PL
Sbjct: 241 MASFLKGITAAVVINGATVNVISTLYYKEESLPGLGMHLERIKVTKDGFKDIIDILNVPL 300
Query: 1051 EGPDQKSFIPVERAESAFLFLVGQDDHNWKSEFYANEASKRLQAHGKEKPQIICYPRAGH 1230
E PDQKS IP+ER+++AFLFLVGQDDHNWKSEFYA EASKRLQAHGKEKPQI+CYP+ GH
Sbjct: 301 EAPDQKSLIPLERSDTAFLFLVGQDDHNWKSEFYAREASKRLQAHGKEKPQIVCYPKTGH 360
Query: 1231 YIEPPYFPLCRASLHVLVGRPVIWGGEPRAHAMAQVDAWQQLQTFFHKHLGGEKGTIPTK 1410
+IEPPY P A+ H +P++ GGEPRAHAMAQVDAWQ+LQTFFHKHL G+K P K
Sbjct: 361 HIEPPYIPWSIAAPHSYFDKPILLGGEPRAHAMAQVDAWQRLQTFFHKHLSGDKRPSPAK 420
>ref|NP_036136.1| acyl-coenzyme A thioesterase 1 [Mus musculus].
Length = 419
Score = 625 bits (1611), Expect = e-179
Identities = 303/413 (73%), Positives = 344/413 (83%)
Frame = +1
Query: 151 MAATVTLEPAGRCCWDEPVRIAVRGLAPEQPVTLRASLRDEKGALFRAHARYCADTDGQL 330
M AT+ LEP+GR CWDEP+ IAVRGLAPEQPVTLR+ LRDEKGALFRAHARY AD+ G+L
Sbjct: 1 MEATLNLEPSGRSCWDEPLSIAVRGLAPEQPVTLRSVLRDEKGALFRAHARYRADSHGEL 60
Query: 331 DLARAPALGGSFVGLEPMGLFWALEPEKPLLRLVKRDVQTPFAVELEVFDGHEPEGGRLL 510
DLAR PALGGSF GLEPMGL WA+EP++P RLVKRDVQTPF VELEV DGHEP+GG+ L
Sbjct: 61 DLARTPALGGSFSGLEPMGLLWAMEPDRPFWRLVKRDVQTPFVVELEVLDGHEPDGGQRL 120
Query: 511 GRAVHERDFLPPGVRREPVRAGRVRATXXXXXXXXXXXXIVDLFGAGGGLPEYRASLLAG 690
AVHER FL PGVRR PVR GRVRAT I+DLFG GGGL EYRASLLAG
Sbjct: 121 AHAVHERHFLAPGVRRVPVREGRVRATLFLPPEPGPFPGIIDLFGVGGGLLEYRASLLAG 180
Query: 691 KGFAVMALAYHNYEDLPKGIENVHLEYFEEAVNYLLSHPQVKGPGVGLLGISKGGELCLS 870
KGFAVMALAY+NY+DLPK +E +H+EYFEEAVNYL SHP+VKGPG+GLLGISKGGEL L+
Sbjct: 181 KGFAVMALAYYNYDDLPKNMETMHMEYFEEAVNYLRSHPEVKGPGIGLLGISKGGELGLA 240
Query: 871 MASFLKSITATVVINASVANIGGTLHYKGETLPPLGTNPSRIKATKDGVADILHVLNSPL 1050
MASFLK ITA VVIN SVA +G T+ YK ET+PP+ +++K TKDG+ D++ L SPL
Sbjct: 241 MASFLKGITAAVVINGSVAAVGNTISYKDETIPPVTILRNQVKMTKDGLKDVVDALQSPL 300
Query: 1051 EGPDQKSFIPVERAESAFLFLVGQDDHNWKSEFYANEASKRLQAHGKEKPQIICYPRAGH 1230
D+KSFIPVER+++ FLFLVGQDDHNWKSEFYA+E SKRLQAHGKEKPQIICYP AGH
Sbjct: 301 --VDKKSFIPVERSDTTFLFLVGQDDHNWKSEFYADEISKRLQAHGKEKPQIICYPAAGH 358
Query: 1231 YIEPPYFPLCRASLHVLVGRPVIWGGEPRAHAMAQVDAWQQLQTFFHKHLGGE 1389
YIEPPYFPLC A +H+LVG + +GGEP+ HAMAQ+DAWQQLQTFFHK LG E
Sbjct: 359 YIEPPYFPLCSAGMHLLVGANITFGGEPKPHAMAQLDAWQQLQTFFHKQLGSE 411
>ref|NP_766168.1| acyl-coenzyme A thioesterase 6 [Mus musculus].
Length = 419
Score = 532 bits (1371), Expect = e-151
Identities = 263/415 (63%), Positives = 323/415 (77%), Gaps = 1/415 (0%)
Frame = +1
Query: 151 MAATVTLEPAGRCCWDEPVRIAVRGLAPEQPVTLRASLRDEKGALFRAHARYCADTDGQL 330
MAAT+++EPAGR CWDEP+ IAVRGLAPEQPVTLR+ LRDEKG LFRAHARY AD+ G+L
Sbjct: 1 MAATLSVEPAGRSCWDEPLSIAVRGLAPEQPVTLRSVLRDEKGMLFRAHARYRADSHGEL 60
Query: 331 DLARAPALGGSFVGLEPMGLFWALEPEKPLLRLVKRDVQTPFAVELEVFDGHEPEGGRLL 510
DLAR PALGGSF GLEPMGL WA+EP++P RL+KRDVQ PF VELEV DGHEP+GG+ L
Sbjct: 61 DLARTPALGGSFSGLEPMGLLWAMEPDRPFWRLIKRDVQIPFVVELEVLDGHEPDGGQRL 120
Query: 511 GRAVHERDFLPPGVRREPVRAGRVRATXXXXXXXXXXXXIVDLFGAGGGLPEYRASLLAG 690
RAVHER F+ PGVRR PVR GRVRAT I+DL+G+ GGL E+RASLLAG
Sbjct: 121 ARAVHERHFMAPGVRRVPVREGRVRATLFLPPGKGQFPGIIDLYGSIGGLCEHRASLLAG 180
Query: 691 KGFAVMALAYHNYEDLPKGIENVHLEYFEEAVNYLLSHPQVKGPGVGLLGISKGGELCLS 870
GFAV+ALAY +EDLP+ + +V LEYFEEA+ +L HPQVKGP +GL+G+SKG +LCLS
Sbjct: 181 HGFAVLALAYFQFEDLPENLSDVRLEYFEEALALMLRHPQVKGPNIGLIGVSKGADLCLS 240
Query: 871 MASFLK-SITATVVINASVANIGGTLHYKGETLPPLGTNPSRIKATKDGVADILHVLNSP 1047
MA+FLK +ITATV+INA VAN L+YK +P LG + ++ K G+ D+ + N+P
Sbjct: 241 MAAFLKDNITATVLINACVANTLVPLYYKDLFVPELGCDQTK---NKSGLMDLRDMWNNP 297
Query: 1048 LEGPDQKSFIPVERAESAFLFLVGQDDHNWKSEFYANEASKRLQAHGKEKPQIICYPRAG 1227
LE P+ +S IP+E+A+ FLFLVG DDHNWKS+ YA A +RLQAHGK++PQII YP G
Sbjct: 298 LEEPNHQSLIPLEKAQGPFLFLVGMDDHNWKSDVYARIACERLQAHGKDRPQIIYYPETG 357
Query: 1228 HYIEPPYFPLCRASLHVLVGRPVIWGGEPRAHAMAQVDAWQQLQTFFHKHLGGEK 1392
H IEPPYFP A++H ++G V GG+PRA + AQ+DAWQ++QTFF K+L GEK
Sbjct: 358 HCIEPPYFPPPIATVHFVLGEAVFNGGKPRAQSRAQLDAWQRIQTFFQKYLNGEK 412
>ref|NP_599008.3| acyl-coenzyme A thioesterase 4 [Mus musculus].
Length = 421
Score = 531 bits (1367), Expect = e-151
Identities = 251/411 (61%), Positives = 311/411 (75%)
Frame = +1
Query: 151 MAATVTLEPAGRCCWDEPVRIAVRGLAPEQPVTLRASLRDEKGALFRAHARYCADTDGQL 330
MAAT+++EP GR CWDEP+ IAVRGLAPEQPVTLR+ LRDEKGALFRAHARY AD+ G+L
Sbjct: 1 MAATLSVEPTGRSCWDEPLSIAVRGLAPEQPVTLRSVLRDEKGALFRAHARYRADSHGEL 60
Query: 331 DLARAPALGGSFVGLEPMGLFWALEPEKPLLRLVKRDVQTPFAVELEVFDGHEPEGGRLL 510
DLAR PALGGSF GLEPMGL WA+EP++P RL+KRDVQTPF VELEV DGHEP+GGR L
Sbjct: 61 DLARVPALGGSFSGLEPMGLLWAMEPDRPFWRLIKRDVQTPFLVELEVLDGHEPDGGRRL 120
Query: 511 GRAVHERDFLPPGVRREPVRAGRVRATXXXXXXXXXXXXIVDLFGAGGGLPEYRASLLAG 690
R VHER F+ PGVRR PVR GRVRAT I+D++G GGGL EYRA L+AG
Sbjct: 121 ARTVHERHFMAPGVRRVPVREGRVRATLFLPPGQGPFPGIIDVYGVGGGLLEYRAGLVAG 180
Query: 691 KGFAVMALAYHNYEDLPKGIENVHLEYFEEAVNYLLSHPQVKGPGVGLLGISKGGELCLS 870
GFA +ALA++++EDLPK + + ++YFEEAV Y+L HP+VKGP +GLLG+S G ++CL
Sbjct: 181 HGFATLALAFYDFEDLPKELNVIEVDYFEEAVRYMLRHPKVKGPDIGLLGLSLGADVCLI 240
Query: 871 MASFLKSITATVVINASVANIGGTLHYKGETLPPLGTNPSRIKATKDGVADILHVLNSPL 1050
MASFL +++ATV IN S + + YK +PPLG + R+K G+ DI+ + N +
Sbjct: 241 MASFLNNVSATVSINGSAFSGNRHIKYKQTMIPPLGHDLRRMKVAFSGILDIVDIRNDAV 300
Query: 1051 EGPDQKSFIPVERAESAFLFLVGQDDHNWKSEFYANEASKRLQAHGKEKPQIICYPRAGH 1230
G + S IP+E+A+ LF+ GQDDH W+SE Y AS RLQAHGKE+PQ++ YP GH
Sbjct: 301 GGCENPSMIPIEKAKGPILFVAGQDDHCWRSELYTQIASDRLQAHGKERPQVLSYPGTGH 360
Query: 1231 YIEPPYFPLCRASLHVLVGRPVIWGGEPRAHAMAQVDAWQQLQTFFHKHLG 1383
YIEPPYFP+C ASLH +V VIWGGE +AH+ AQ+DAW+Q+ FF KHLG
Sbjct: 361 YIEPPYFPMCPASLHKIVNEAVIWGGEVKAHSKAQIDAWKQILFFFGKHLG 411
>ref|NP_001158037.1| acyl-coenzyme A amino acid N-acyltransferase 1 [Mus musculus].
Length = 416
Score = 326 bits (836), Expect = 3e-89
Identities = 171/399 (42%), Positives = 252/399 (63%), Gaps = 4/399 (1%)
Frame = +1
Query: 196 DEPVRIAVRGLAPEQPVTLRASLRDEKGALFRAHARYCADTDGQLDLARAPALGGSFVGL 375
DEPV I GL P Q VT++A+++DE +F++ A Y + G++DL + PALGG +VG+
Sbjct: 15 DEPVSIRATGLPPSQIVTIKATVKDENDNVFQSQAFYKTNEAGEVDLEKTPALGGDYVGV 74
Query: 376 EPMGLFWALEPEKPLLRLVKRDVQ-TPFAVELEVFDG-HEPEGGRLLGRAVH--ERDFLP 543
PMGLF++L+P+K RL+K+DV +PF + L+++D + E R+ +A +R F+
Sbjct: 75 HPMGLFFSLKPKKAFHRLMKKDVMNSPFCICLDLYDSVNWLETVRIPSKASQRVQRWFVG 134
Query: 544 PGVRREPVRAGRVRATXXXXXXXXXXXXIVDLFGAGGGLPEYRASLLAGKGFAVMALAYH 723
PGV+RE ++ GRVR I+DLFG GGL E+RASLLA GFAV+ALAY
Sbjct: 135 PGVKREQIQEGRVRGALFLPPGKGPFPGIIDLFGVIGGLVEFRASLLASHGFAVLALAYF 194
Query: 724 NYEDLPKGIENVHLEYFEEAVNYLLSHPQVKGPGVGLLGISKGGELCLSMASFLKSITAT 903
Y+DLP+ ++ V LEYFEEA N+LLSHP+++ PG+G++ SKG E+ L+MA +LK + AT
Sbjct: 195 AYKDLPEKLQEVDLEYFEEAANFLLSHPKIQQPGIGVISTSKGAEIGLAMACYLKQVIAT 254
Query: 904 VVINASVANIGGTLHYKGETLPPLGTNPSRIKATKDGVADILHVLNSPLEGPDQKSFIPV 1083
V IN + L Y+ + P+ R++ G H + K+ +PV
Sbjct: 255 VCINGATTTTAVPLRYQDLVVTPIQQALERMEVHVSGAVCFRHT----TQYLQNKNILPV 310
Query: 1084 ERAESAFLFLVGQDDHNWKSEFYANEASKRLQAHGKEKPQIICYPRAGHYIEPPYFPLCR 1263
E+A+ LF+VG++D S+ +A A RL+ HG+ +++ YP AGH IEPPY PLC
Sbjct: 311 EKAQGKILFIVGENDELLDSKLHAQRAMDRLRRHGRSSGRMLAYPGAGHLIEPPYSPLCF 370
Query: 1264 ASLHVLVGRPVIWGGEPRAHAMAQVDAWQQLQTFFHKHL 1380
AS ++GRP+ +GG+ AHA AQ +W+++Q FF KHL
Sbjct: 371 ASWQPVLGRPMCFGGDLMAHAAAQEHSWREIQKFFRKHL 409
>ref|NP_031545.2| bile acid-CoA:amino acid N-acyltransferase [Mus musculus].
Length = 420
Score = 323 bits (828), Expect = 2e-88
Identities = 175/400 (43%), Positives = 242/400 (60%), Gaps = 5/400 (1%)
Frame = +1
Query: 196 DEPVRIAVRGLAPEQPVTLRASLRDEKGALFRAHARYCADTDGQLDLARAPALGGSFVGL 375
DEPV I V GLAP Q V L+ASL+DEKG LF + A Y A G++DL P+LGG ++G+
Sbjct: 14 DEPVHIQVTGLAPFQVVCLQASLKDEKGNLFSSQAFYRASEVGEVDLEHDPSLGGDYMGV 73
Query: 376 EPMGLFWALEPEKPLLRLVKRDVQ-TPFAVELEVFDGHEPEGGRLLGRAVH----ERDFL 540
PMGLFW+L+PEK L RL+KRDV +P+ + ++ + P ++ + ER ++
Sbjct: 74 HPMGLFWSLKPEKLLGRLIKRDVMNSPYQIHIKACHPYFPLQDIVVSPPLDSLTLERWYV 133
Query: 541 PPGVRREPVRAGRVRATXXXXXXXXXXXXIVDLFGAGGGLPEYRASLLAGKGFAVMALAY 720
PGV+R V+ R+R ++DLFG GGL E+RASLLA +GFA +ALAY
Sbjct: 134 APGVKRIQVKESRIRGALFLPPGEGPFPGVIDLFGGAGGLMEFRASLLASRGFATLALAY 193
Query: 721 HNYEDLPKGIENVHLEYFEEAVNYLLSHPQVKGPGVGLLGISKGGELCLSMASFLKSITA 900
NY+DLP +E V LEYFEE V +LL HP+V GPGVG+L + G E+ LSMA LK I A
Sbjct: 194 WNYDDLPSRLEKVDLEYFEEGVEFLLRHPKVLGPGVGILSVCIGAEIGLSMAINLKQIRA 253
Query: 901 TVVINASVANIGGTLHYKGETLPPLGTNPSRIKATKDGVADILHVLNSPLEGPDQKSFIP 1080
TV+IN Y G+ PP+ +N + G+ + + D K P
Sbjct: 254 TVLINGPNFVSQSPHVYHGQVYPPVPSNEEFVVTNALGLVEFYRTFQETAD-KDSKYCFP 312
Query: 1081 VERAESAFLFLVGQDDHNWKSEFYANEASKRLQAHGKEKPQIICYPRAGHYIEPPYFPLC 1260
+E+A FLF+VG+DD N S+ +AN+A +L +GK+ ++ YP AGH IEPPY PLC
Sbjct: 313 IEKAHGHFLFVVGEDDKNLNSKVHANQAIAQLMKNGKKNWTLLSYPGAGHLIEPPYTPLC 372
Query: 1261 RASLHVLVGRPVIWGGEPRAHAMAQVDAWQQLQTFFHKHL 1380
+AS ++ + WGGE HA AQ +W+++Q F +HL
Sbjct: 373 QASRMPILIPSLSWGGEVIPHAAAQEHSWKEIQKFLKQHL 412
>ref|NP_663343.2| acyl-coenzyme A amino acid N-acyltransferase 2 [Mus musculus].
Length = 420
Score = 316 bits (809), Expect = 3e-86
Identities = 167/399 (41%), Positives = 249/399 (62%), Gaps = 4/399 (1%)
Frame = +1
Query: 196 DEPVRIAVRGLAPEQPVTLRASLRDEKGALFRAHARYCADTDGQLDLARAPALGGSFVGL 375
DEPV I GL P Q VT++A+++DE +F++ A Y + G++DL + PALGG +VG+
Sbjct: 15 DEPVSIRATGLPPSQIVTIKATVKDENDNVFQSQAFYKTNEAGEVDLEKTPALGGDYVGV 74
Query: 376 EPMGLFWALEPEKPLLRLVKRDVQ-TPFAVELEVFDG-HEPEGGRLLGRAVH--ERDFLP 543
PMGLF++L+P+K RL+K+DV +P + L+++D + E R+ +A +R F+
Sbjct: 75 HPMGLFFSLKPKKAFHRLMKKDVMNSPLCICLDLYDSVNWLETVRIPSKASQRVQRWFVG 134
Query: 544 PGVRREPVRAGRVRATXXXXXXXXXXXXIVDLFGAGGGLPEYRASLLAGKGFAVMALAYH 723
PGV+RE ++ GRVR I+DLFG GGL E+RASLLA GFAV+ALAY
Sbjct: 135 PGVKREQIQEGRVRGALFLPPGKGPFPGIIDLFGLIGGLVEFRASLLASHGFAVLALAYF 194
Query: 724 NYEDLPKGIENVHLEYFEEAVNYLLSHPQVKGPGVGLLGISKGGELCLSMASFLKSITAT 903
YEDLP+ + V LEYFEEA N+LLSHP+++ PG+G++ SKG E+ L+MA +LK + AT
Sbjct: 195 AYEDLPEKPQEVDLEYFEEAANFLLSHPKIQQPGIGVISTSKGAEIGLAMACYLKQVIAT 254
Query: 904 VVINASVANIGGTLHYKGETLPPLGTNPSRIKATKDGVADILHVLNSPLEGPDQKSFIPV 1083
V IN L Y+ + P+ RI+ G + + ++ +PV
Sbjct: 255 VCINGPTTITIFPLRYQDLVMTPIHPALERIQVHDSGALLFRYTTQYLHNKLNSQNILPV 314
Query: 1084 ERAESAFLFLVGQDDHNWKSEFYANEASKRLQAHGKEKPQIICYPRAGHYIEPPYFPLCR 1263
E+A+ LF+VG++D S+ +A +A RLQ HG+ +++ YP AGH IEPPY P+C
Sbjct: 315 EKAQGKILFIVGENDECLDSKLHAQKAMDRLQRHGRSSGRMLAYPGAGHLIEPPYSPVCF 374
Query: 1264 ASLHVLVGRPVIWGGEPRAHAMAQVDAWQQLQTFFHKHL 1380
+ ++G+P+ +GG+ AHA AQ +W+++Q FF KHL
Sbjct: 375 VAWFPVLGQPMCFGGDLMAHAAAQEHSWREIQKFFRKHL 413
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 51,207,711
Number of extensions: 1565939
Number of successful extensions: 6060
Number of sequences better than 1.0e-05: 9
Number of HSP's gapped: 6011
Number of HSP's successfully gapped: 9
Length of query: 503
Length of database: 15,617,559
Length adjustment: 106
Effective length of query: 397
Effective length of database: 12,433,743
Effective search space: 4936195971
Effective search space used: 4936195971
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002484
(1509 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_001929053.1| PREDICTED: acyl-coenzyme A thioesterase 6-li... 644 0.0
Alignment gi|XP_001929075.1| PREDICTED: acyl-coenzyme A thioesterase 4 [S... 583 e-166
Alignment gi|XP_003361762.1| PREDICTED: acyl-coenzyme A thioesterase 2, m... 361 e-100
Alignment gi|XP_003122092.1| PREDICTED: acyl-coenzyme A amino acid N-acyl... 353 2e-97
>ref|XP_001929053.1| PREDICTED: acyl-coenzyme A thioesterase 6-like [Sus scrofa].
Length = 421
Score = 644 bits (1660), Expect = 0.0
Identities = 310/420 (73%), Positives = 356/420 (84%)
Frame = +1
Query: 151 MAATVTLEPAGRCCWDEPVRIAVRGLAPEQPVTLRASLRDEKGALFRAHARYCADTDGQL 330
MAATVTLEPAGRCCWDEPVRIAVRGLAPEQPVTLRASLRDEKGALFRAHARYCAD DGQL
Sbjct: 1 MAATVTLEPAGRCCWDEPVRIAVRGLAPEQPVTLRASLRDEKGALFRAHARYCADADGQL 60
Query: 331 DLARAPALGGSFVGLEPMGLFWALEPEKPLLRLVKRDVQTPFAVELEVFDGHEPEGGRLL 510
DLARAPALGGSFVGLEPMGLFWALEPEKPLLRLVKRDVQTPFAVELEVFDGHEPEGGRLL
Sbjct: 61 DLARAPALGGSFVGLEPMGLFWALEPEKPLLRLVKRDVQTPFAVELEVFDGHEPEGGRLL 120
Query: 511 GRAVHERDFLPPGVRREPVRAGRVRATXXXXXXXXXXXXIVDLFGAGGGLPEYRASLLAG 690
GRAVHERDFL PGVRREPVRAGRVRAT I+DLFG+GGGL EYRASLLAG
Sbjct: 121 GRAVHERDFLAPGVRREPVRAGRVRATLFLPSDTGPFPGIIDLFGSGGGLCEYRASLLAG 180
Query: 691 KGFAVMALAYHNYEDLPKGIENVHLEYFEEAVNYLLSHPQVKGPGVGLLGISKGGELCLS 870
+GFAV+ALAY +EDLP+ + +V L+YFEEAV+++L H +VKGP VGLLG SKGG+LCLS
Sbjct: 181 RGFAVLALAYFRFEDLPEYLNDVSLDYFEEAVDFMLQHSKVKGPSVGLLGFSKGGDLCLS 240
Query: 871 MASFLKSITATVVINASVANIGGTLHYKGETLPPLGTNPSRIKATKDGVADILHVLNSPL 1050
MASFLK ITATVVINA VAN L YK +P L ++P + + G +++ + N+PL
Sbjct: 241 MASFLKGITATVVINACVANTIAPLRYKDMIIPHLSSDPWKYTINESGFLNLMDIWNNPL 300
Query: 1051 EGPDQKSFIPVERAESAFLFLVGQDDHNWKSEFYANEASKRLQAHGKEKPQIICYPRAGH 1230
E P+Q+S IP+E+A+ FLF+VG DDHNWKSEFYA+ AS+RLQAHGK++PQII YP GH
Sbjct: 301 EKPNQQSLIPLEKAQGPFLFIVGMDDHNWKSEFYAHVASERLQAHGKDRPQIIYYPGTGH 360
Query: 1231 YIEPPYFPLCRASLHVLVGRPVIWGGEPRAHAMAQVDAWQQLQTFFHKHLGGEKGTIPTK 1410
I+PPYFPLCRAS+H ++ +P+ +GGEP+AH+ AQVDAWQQ+QTFFHKHL G+K P+K
Sbjct: 361 CIDPPYFPLCRASVHAVLDQPIFYGGEPKAHSRAQVDAWQQIQTFFHKHLNGKKSVKPSK 420
>ref|XP_001929075.1| PREDICTED: acyl-coenzyme A thioesterase 4 [Sus scrofa].
Length = 418
Score = 583 bits (1502), Expect = e-166
Identities = 288/413 (69%), Positives = 329/413 (79%), Gaps = 2/413 (0%)
Frame = +1
Query: 151 MAATVTLEPAGRCCWDEPVRIAVRGLAPEQPVTLRASLRDEKGALFRAHARYCADTDGQL 330
MAATV LEPAGRC WDEPVRIAVRGLAP Q VTLRASLRDEKGALFRAHARYCAD DGQL
Sbjct: 1 MAATVVLEPAGRCRWDEPVRIAVRGLAPGQRVTLRASLRDEKGALFRAHARYCADADGQL 60
Query: 331 DLARAPALGGSFVGLEPMGLFWALEPEKPLLRLVKRDVQTPFAVELEVFDGHEPE--GGR 504
DLARAPALGGSFVGLEPMGL WALEPEKP R VKRDVQTPFAV+LEVFDGHEPE +
Sbjct: 61 DLARAPALGGSFVGLEPMGLLWALEPEKPFWRFVKRDVQTPFAVKLEVFDGHEPEPQAEQ 120
Query: 505 LLGRAVHERDFLPPGVRREPVRAGRVRATXXXXXXXXXXXXIVDLFGAGGGLPEYRASLL 684
LLG AVHERDFLPPGVRREPVRAGRVRAT I+D+FG GGGL EYRASLL
Sbjct: 121 LLGVAVHERDFLPPGVRREPVRAGRVRATLFLPPGLGPFPGIIDIFGMGGGLLEYRASLL 180
Query: 685 AGKGFAVMALAYHNYEDLPKGIENVHLEYFEEAVNYLLSHPQVKGPGVGLLGISKGGELC 864
AG GFA +ALAY ++EDLPK + +HL+YFEEA+ Y+L H QVKGPG+GLLGIS G ++C
Sbjct: 181 AGHGFATLALAYCDFEDLPKKFDTIHLDYFEEALCYMLQHTQVKGPGIGLLGISLGADIC 240
Query: 865 LSMASFLKSITATVVINASVANIGGTLHYKGETLPPLGTNPSRIKATKDGVADILHVLNS 1044
LSMASFLK+I+ATV IN S N ++YK ++PPLG + R+K G+ DI+ + N
Sbjct: 241 LSMASFLKNISATVSINGSGFNGNKPIYYKETSIPPLGHDLRRMKVAFSGLLDIVDIRND 300
Query: 1045 PLEGPDQKSFIPVERAESAFLFLVGQDDHNWKSEFYANEASKRLQAHGKEKPQIICYPRA 1224
+ G + IP+E+A+ LF+VGQDDHNW+SE YA AS+RLQAHGK K QII YP
Sbjct: 301 IVGGYENPCMIPIEKAQGPILFIVGQDDHNWRSELYAQIASERLQAHGKGKAQIISYPGT 360
Query: 1225 GHYIEPPYFPLCRASLHVLVGRPVIWGGEPRAHAMAQVDAWQQLQTFFHKHLG 1383
GHYIEPPYFP+C ASLH L+ +PVIWGGEPRAH+ AQ+DAW+Q+ TFF KHLG
Sbjct: 361 GHYIEPPYFPMCPASLHRLLDKPVIWGGEPRAHSKAQIDAWKQILTFFSKHLG 413
>ref|XP_003361762.1| PREDICTED: acyl-coenzyme A thioesterase 2, mitochondrial-like,
partial [Sus scrofa].
Length = 173
Score = 361 bits (926), Expect = e-100
Identities = 172/172 (100%), Positives = 172/172 (100%)
Frame = +1
Query: 895 TATVVINASVANIGGTLHYKGETLPPLGTNPSRIKATKDGVADILHVLNSPLEGPDQKSF 1074
TATVVINASVANIGGTLHYKGETLPPLGTNPSRIKATKDGVADILHVLNSPLEGPDQKSF
Sbjct: 1 TATVVINASVANIGGTLHYKGETLPPLGTNPSRIKATKDGVADILHVLNSPLEGPDQKSF 60
Query: 1075 IPVERAESAFLFLVGQDDHNWKSEFYANEASKRLQAHGKEKPQIICYPRAGHYIEPPYFP 1254
IPVERAESAFLFLVGQDDHNWKSEFYANEASKRLQAHGKEKPQIICYPRAGHYIEPPYFP
Sbjct: 61 IPVERAESAFLFLVGQDDHNWKSEFYANEASKRLQAHGKEKPQIICYPRAGHYIEPPYFP 120
Query: 1255 LCRASLHVLVGRPVIWGGEPRAHAMAQVDAWQQLQTFFHKHLGGEKGTIPTK 1410
LCRASLHVLVGRPVIWGGEPRAHAMAQVDAWQQLQTFFHKHLGGEKGTIPTK
Sbjct: 121 LCRASLHVLVGRPVIWGGEPRAHAMAQVDAWQQLQTFFHKHLGGEKGTIPTK 172
>ref|XP_003122092.1| PREDICTED: acyl-coenzyme A amino acid N-acyltransferase 2-like [Sus
scrofa].
Length = 419
Score = 353 bits (905), Expect = 2e-97
Identities = 187/414 (45%), Positives = 262/414 (63%), Gaps = 4/414 (0%)
Frame = +1
Query: 163 VTLEPAGRCCWDEPVRIAVRGLAPEQPVTLRASLRDEKGALFRAHARYCADTDGQLDLAR 342
+T PA DEPV I V GLAP Q VTL ASL+DEKG LF++ A Y A+ G+LDL +
Sbjct: 4 LTATPASALA-DEPVHIRVMGLAPLQVVTLMASLKDEKGNLFQSRAFYRANEAGELDLEQ 62
Query: 343 APALGGSFVGLEPMGLFWALEPEKPLLRLVKRDVQ-TPFAVELEVFDG-HEPEGGRLLGR 516
PALGG FVG+ PMGLFW+L+PEKP RL+K +V +PF++ L+++D + + G + R
Sbjct: 63 DPALGGDFVGVHPMGLFWSLKPEKPFGRLLKLEVMNSPFSITLDLYDSVYLQKSGVVQPR 122
Query: 517 AVHE--RDFLPPGVRREPVRAGRVRATXXXXXXXXXXXXIVDLFGAGGGLPEYRASLLAG 690
A E R F PGV+R +R GRVR I+DLFG GGL EYRA LLA
Sbjct: 123 ASLEVQRWFSSPGVQRLMIREGRVRGALFLPPGEGPFPGIIDLFGGIGGLLEYRAGLLAA 182
Query: 691 KGFAVMALAYHNYEDLPKGIENVHLEYFEEAVNYLLSHPQVKGPGVGLLGISKGGELCLS 870
GFA +ALAY Y+DLP ++ V L+YFEEA N LL+HP+++ PG+G++ +SKG E+ L+
Sbjct: 183 HGFAALALAYFAYDDLPNQLQEVDLDYFEEAANLLLAHPKIQKPGIGVISVSKGAEIGLA 242
Query: 871 MASFLKSITATVVINASVANIGGTLHYKGETLPPLGTNPSRIKATKDGVADILHVLNSPL 1050
MA +LK + ATV IN S A L Y+ L P+ + P R++ G + H P
Sbjct: 243 MACYLKQVVATVCINGSNAAFEFPLRYRDLVLTPIPSFPERMEVNASGAVRLRHYKGDPR 302
Query: 1051 EGPDQKSFIPVERAESAFLFLVGQDDHNWKSEFYANEASKRLQAHGKEKPQIICYPRAGH 1230
+ +Q+S PVE+++ LF++G DD + S YA +A +LQ+HG+ +++ YP AGH
Sbjct: 303 DESNQQSVFPVEKSKGPILFIIGGDDECFNSRDYAEQALNQLQSHGRSDGRMLLYPGAGH 362
Query: 1231 YIEPPYFPLCRASLHVLVGRPVIWGGEPRAHAMAQVDAWQQLQTFFHKHLGGEK 1392
IEPPY+P+C S + RP++WGG+P H AQ AW+++ FF ++L G +
Sbjct: 363 LIEPPYWPMCYGSWTRGLFRPLLWGGDPVLHEAAQEQAWREILKFFRQNLVGSR 416
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 38,512,194
Number of extensions: 1215233
Number of successful extensions: 4834
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 4819
Number of HSP's successfully gapped: 4
Length of query: 503
Length of database: 11,343,932
Length adjustment: 103
Effective length of query: 400
Effective length of database: 8,779,541
Effective search space: 3511816400
Effective search space used: 3511816400
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002484
(1509 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|GL895289.1| Sus scrofa unplaced genomic scaffold chrU_scaffol... 1199 0.0
Sscrofa_Chr07 862 0.0
gb|GL893568.1| Sus scrofa unplaced genomic scaffold chrU_scaffol... 507 e-141
gb|GL896291.1| Sus scrofa unplaced genomic scaffold chrU_scaffol... 410 e-112
gb|GL896184.1| Sus scrofa unplaced genomic scaffold chrU_scaffold55 180 1e-42
gb|GL896195.1| Sus scrofa unplaced genomic scaffold chrU_scaffold56 172 4e-40
>gb|GL895289.1| Sus scrofa unplaced genomic scaffold chrU_scaffold387
Length = 941
Score = 1199 bits (605), Expect = 0.0
Identities = 608/609 (99%)
Strand = Plus / Plus
Query: 892 atcaccgccaccgtggtaatcaatgcctctgtggccaacatcgggggaaccttgcactac 951
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atcaccgccaccgtggtaatcaatgcctctgtggccaacatcgggggaaccttgcactac 60
Query: 952 aagggtgagaccctgccccctctgggcaccaacccaagtcgaatcaaagcgaccaaagat 1011
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aagggtgagaccctgccccctctgggcaccaacccaagtcgaatcaaagcgaccaaagat 120
Query: 1012 ggcgttgcagacattttgcatgtcctcaacagccctttggagggacctgaccagaagagt 1071
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ggcgttgcagacattttgcatgtcctcaacagccctttggagggacctgaccagaagagt 180
Query: 1072 ttcattcctgtggaaagggctgagagtgccttcctgttccttgtgggtcaggatgaccac 1131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttcattcctgtggaaagggctgagagtgccttcctgttccttgtgggtcaggatgaccac 240
Query: 1132 aactggaagagtgagttctatgctaatgaggcctctaagcgcttgcaggcccatgggaag 1191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aactggaagagtgagttctatgctaatgaggcctctaagcgcttgcaggcccatgggaag 300
Query: 1192 gagaagccccagatcatctgctacccaagggcgggacactatattgagcctccttacttc 1251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gagaagccccagatcatctgctacccaagggcgggacactatattgagcctccttacttc 360
Query: 1252 cccctgtgccgggcttctctgcacgtcttggtgggccgccctgtcatctggggaggggag 1311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cccctgtgccgggcttctctgcacgtcttggtgggccgccctgtcatctggggaggggag 420
Query: 1312 cccagggctcatgccatggcccaggtggatgcctggcagcagctccagactttcttccac 1371
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cccagggctcatgccatggcccaggtggatgcctggcagcagctccagactttcttccac 480
Query: 1372 aaacacttgggcggggagaaggggactatcccaacaaaactgtgattgggtcacatctga 1431
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aaacacttgggcggggagaaggggactatcccaacaaaactgtgattgggtcacatctga 540
Query: 1432 ttgggtggcatccctgatgctaatctctcctgggaacagctgccaaaagttgtgtgtccg 1491
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 541 ttgggtggcatccctgatgctaatctctcctgggaacagctgccagaagttgtgtgtccg 600
Query: 1492 tgtgtgtag 1500
|||||||||
Sbjct: 601 tgtgtgtag 609
>Sscrofa_Chr07
|| Length = 134764511
Score = 862 bits (435), Expect = 0.0
Identities = 450/455 (98%)
Strand = Plus / Minus
Query: 149 ggatggcggcgaccgtgacgctggagcccgcgggccgttgctgctgggacgagccggtgc 208
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 102748484 ggatggcggcgaccgtgacgctggagcccgcgggtcgttgctgctgggacgagccggtgc 102748425
Query: 209 gcattgctgtgcgcggcctggccccagagcagccggtcacgctgcgcgcgtccctgcgcg 268
|||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 102748424 gcatcgctgtgcgcggcctggccccagagcagccggtcacgctgcgcgcgtctctgcgcg 102748365
Query: 269 acgagaagggcgcgctcttcagggcccacgcgcgctactgcgccgacaccgacggccagc 328
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 102748364 acgagaagggcgcgctcttcagggcccacgcgcgctactgcgccgacgccgacggccagc 102748305
Query: 329 tggacctggcgcgcgcgcccgcgctgggcggcagcttcgtggggctcgagcccatggggc 388
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 102748304 tggacctggcgcgcgcgcccgcgctgggcggcagcttcgtggggctcgagcccatggggc 102748245
Query: 389 tcttctgggctctggagcccgagaagcctttgctacggctggtgaagcgggacgtgcaga 448
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 102748244 tcttctgggctctggagcccgagaagcctttgctacggctggtgaagcgggacgtgcaga 102748185
Query: 449 cgcccttcgccgtggagctggaggtgttcgacggccacgagcccgagggcgggcggctcc 508
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 102748184 cgcccttcgccgtggagctggaggtgttcgacggccacgagcccgagggcgggcggctcc 102748125
Query: 509 tgggccgggctgtgcacgagcgcgacttcctgccgcccggggttcggcgcgagccggtgc 568
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 102748124 tgggccgggctgtgcacgagcgcgacttcctggcgcccggggttcggcgcgagccggtgc 102748065
Query: 569 gcgcgggccgggtgcgcgccacgcttttcctgcct 603
|||||||||||||||||||||||||||||||||||
Sbjct: 102748064 gcgcgggccgggtgcgcgccacgcttttcctgcct 102748030
Score = 605 bits (305), Expect = e-170
Identities = 426/465 (91%), Gaps = 6/465 (1%)
Strand = Plus / Minus
Query: 149 ggatggcggcgaccgtgacgctggagcccgcgggccgttgctgctgggacgagccggtgc 208
||||||| ||||| ||| ||||||||| ||||| || || ||||||||||||||||||
Sbjct: 102791177 ggatggcagcgactgtggtgctggagcctgcgggtcgctgtcgctgggacgagccggtgc 102791118
Query: 209 gcattgctgtgcgcggcctggccccagagcagccggtcacgctgcgcgcgtccctgcgcg 268
|||| ||||||||||||||||| || | ||||| ||||||||||||||||||||||||||
Sbjct: 102791117 gcatcgctgtgcgcggcctggctccggggcagcgggtcacgctgcgcgcgtccctgcgcg 102791058
Query: 269 acgagaagggcgcgctcttcagggcccacgcgcgctactgcgccgacaccgacggccagc 328
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 102791057 acgagaagggcgcgctcttcagggcccacgcgcgctactgcgccgacgccgacggccagc 102790998
Query: 329 tggacctggcgcgcgcgcccgcgctgggcggcagcttcgtggggctcgagcccatggggc 388
|||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 102790997 tggacctggcgcgcgcacccgcgctgggcggcagcttcgtggggcttgagcccatggggc 102790938
Query: 389 tcttctgggctctggagcccgagaagcctttgctacggctggtgaagcgggacgtgcaga 448
|| ||||||||||||||||||| |||||||| ||| | |||||||||||||||||||
Sbjct: 102790937 tcctctgggctctggagcccgaaaagcctttttggcggtttgtgaagcgggacgtgcaga 102790878
Query: 449 cgcccttcgccgtggagctggaggtgttcgacggccacgagcccgag-----ggcgg-gc 502
|||||||||||||| |||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 102790877 cgcccttcgccgtgaagctggaggtgttcgacggccacgagcccgagcctcaggcggagc 102790818
Query: 503 ggctcctgggccgggctgtgcacgagcgcgacttcctgccgcccggggttcggcgcgagc 562
|||||||||| ||| |||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 102790817 agctcctgggcgtggcagtgcacgagcgcgacttcctgccgcccggggttcggcgggagc 102790758
Query: 563 cggtgcgcgcgggccgggtgcgcgccacgcttttcctgcctccag 607
||||||||||||||||||||||||||||||| ||||| |||||||
Sbjct: 102790757 cggtgcgcgcgggccgggtgcgcgccacgctcttcctacctccag 102790713
Score = 79.8 bits (40), Expect = 4e-12
Identities = 76/88 (86%)
Strand = Plus / Minus
Query: 844 tccaaaggcggtgaactctgcctctccatggcctccttcctgaagagcatcaccgccacc 903
|||||||| ||||| || |||||||| |||||||| ||| ||||| ||||||| |||||
Sbjct: 102743431 tccaaaggaggtgacctgtgcctctcaatggcctctttcttgaagggcatcacagccact 102743372
Query: 904 gtggtaatcaatgcctctgtggccaaca 931
|| || |||||||||| |||||||||||
Sbjct: 102743371 gtagttatcaatgcctgtgtggccaaca 102743344
>gb|GL893568.1| Sus scrofa unplaced genomic scaffold chrU_scaffold232
Length = 295
Score = 507 bits (256), Expect = e-141
Identities = 280/288 (97%)
Strand = Plus / Minus
Query: 320 acggccagctggacctggcgcgcgcgcccgcgctgggcggcagcttcgtggggctcgagc 379
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 acggccagctggacctggcgcgcgcgcccgcgctgggcggcagcttcgtggggctcgagc 236
Query: 380 ccatggggctcttctgggctctggagcccgagaagcctttgctacggctggtgaagcggg 439
||||||||||||||||||||||||||||||| |||||||| ||| | ||||||||||
Sbjct: 235 ccatggggctcttctgggctctggagcccgaaaagcctttatggcggtttgtgaagcggg 176
Query: 440 acgtgcagacgcccttcgccgtggagctggaggtgttcgacggccacgagcccgagggcg 499
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175 acgtgcagacgcccttcgccgtggagctggaggtgttcgacggccacgagcccgagggcg 116
Query: 500 ggcggctcctgggccgggctgtgcacgagcgcgacttcctgccgcccggggttcggcgcg 559
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 115 ggcggctcctgggccgggctgtgcacgagcgcgacttcctggcgcccggggttcggcgcg 56
Query: 560 agccggtgcgcgcgggccgggtgcgcgccacgcttttcctgcctccag 607
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55 agccggtgcgcgcgggccgggtgcgcgccacgcttttcctgcctccag 8
>gb|GL896291.1| Sus scrofa unplaced genomic scaffold chrU_scaffold646
Length = 25683
Score = 410 bits (207), Expect = e-112
Identities = 207/207 (100%)
Strand = Plus / Minus
Query: 606 agaacctggcccctttcctgggatcgtggacctttttggagctggagggggccttccaga 665
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8244 agaacctggcccctttcctgggatcgtggacctttttggagctggagggggccttccaga 8185
Query: 666 ataccgagccagtctgctggctggaaagggttttgctgtgatggcgctggcttatcataa 725
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8184 ataccgagccagtctgctggctggaaagggttttgctgtgatggcgctggcttatcataa 8125
Query: 726 ctacgaagacctccccaaaggcatagagaatgtccacctggagtactttgaagaagctgt 785
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8124 ctacgaagacctccccaaaggcatagagaatgtccacctggagtactttgaagaagctgt 8065
Query: 786 gaactacttgcttagtcaccctcaggt 812
|||||||||||||||||||||||||||
Sbjct: 8064 gaactacttgcttagtcaccctcaggt 8038
Score = 117 bits (59), Expect = 2e-23
Identities = 62/63 (98%)
Strand = Plus / Minus
Query: 86 gcggacggttggtagggcttccaaaactaaggaccgctaacccaatctcttggaccccat 145
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9482 gcggacggttggtaggtcttccaaaactaaggaccgctaacccaatctcttggaccccat 9423
Query: 146 tcc 148
|||
Sbjct: 9422 tcc 9420
>gb|GL896184.1| Sus scrofa unplaced genomic scaffold chrU_scaffold55
Length = 120
Score = 180 bits (91), Expect = 1e-42
Identities = 91/91 (100%)
Strand = Plus / Plus
Query: 806 ctcaggtgaagggtccaggagtcgggctgcttgggatttccaaaggcggtgaactctgcc 865
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30 ctcaggtgaagggtccaggagtcgggctgcttgggatttccaaaggcggtgaactctgcc 89
Query: 866 tctccatggcctccttcctgaagagcatcac 896
|||||||||||||||||||||||||||||||
Sbjct: 90 tctccatggcctccttcctgaagagcatcac 120
>gb|GL896195.1| Sus scrofa unplaced genomic scaffold chrU_scaffold56
Length = 121
Score = 172 bits (87), Expect = 4e-40
Identities = 90/91 (98%)
Strand = Plus / Plus
Query: 806 ctcaggtgaagggtccaggagtcgggctgcttgggatttccaaaggcggtgaactctgcc 865
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31 ctcaggtgaagggtccaggagtcgggctgcttgggatttccaaaggcggtgaactctgcc 90
Query: 866 tctccatggcctccttcctgaagagcatcac 896
||||| |||||||||||||||||||||||||
Sbjct: 91 tctccgtggcctccttcctgaagagcatcac 121
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 36,914,687
Number of extensions: 314
Number of successful extensions: 314
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 312
Number of HSP's successfully gapped: 10
Length of query: 1509
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1488
Effective length of database: 2,808,413,156
Effective search space: 4178918776128
Effective search space used: 4178918776128
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)