Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002502
(1932 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001029397.1| protein OS-9 precursor [Bos taurus]. 893 0.0
Alignment gi|XP_582765.3| PREDICTED: osteosarcoma amplified 9, endoplasmi... 363 e-100
Alignment gi|NP_001178336.1| endoplasmic reticulum lectin 1 [Bos taurus]. 85 3e-16
Alignment gi|XP_002691369.1| PREDICTED: endoplasmic reticulum lectin 1 is... 85 3e-16
Alignment gi|XP_002691368.1| PREDICTED: endoplasmic reticulum lectin 1 is... 85 3e-16
Alignment gi|XP_002691367.1| PREDICTED: endoplasmic reticulum lectin 1 is... 85 3e-16
Alignment gi|XP_002700808.1| PREDICTED: endoplasmic reticulum lectin 1 [B... 85 3e-16
Alignment gi|XP_001249693.1| PREDICTED: endoplasmic reticulum lectin 1 is... 85 3e-16
>ref|NP_001029397.1| protein OS-9 precursor [Bos taurus].
Length = 667
Score = 893 bits (2308), Expect = 0.0
Identities = 458/599 (76%), Positives = 478/599 (79%), Gaps = 1/599 (0%)
Frame = +3
Query: 30 MAAETXXXXXXXXXXXXXXXPANLTGGVGSLNLEELSEMRYGIEILPLPVMGGQNQASDV 209
MAAET PA LTGGVGSLNLEELSEMRYGIEILPLPVMGGQ+QASDV
Sbjct: 1 MAAETLLSSLLGLLLLGLLLPATLTGGVGSLNLEELSEMRYGIEILPLPVMGGQSQASDV 60
Query: 210 VIVSSKYKQRYECRLPAGAIHFQREREEEAPAYQGPGIPELLSPMKDAPCLLKTKDWWTY 389
VIVSSKYKQRYECRLPAGAIHFQREREEE PAYQGPGIPELLSPMKDAPCLLKTKDWWTY
Sbjct: 61 VIVSSKYKQRYECRLPAGAIHFQREREEETPAYQGPGIPELLSPMKDAPCLLKTKDWWTY 120
Query: 390 EFCYGRHIQQYHMEDSEIKGEVLYLGYYQSAFDWDDETAKASKQHRLKRYHSQTYGNGSK 569
EFCYGRHIQQYHMEDSEIKGEVLYLGYYQSAFDWDDETAKASKQHRLKRYHSQTYGNGSK
Sbjct: 121 EFCYGRHIQQYHMEDSEIKGEVLYLGYYQSAFDWDDETAKASKQHRLKRYHSQTYGNGSK 180
Query: 570 CDLNGRPREAEVRFLCDEGAGISGDYIDRVDEPLSCSYVLTIRTSRXXXXXXXXXXXXXX 749
CDLNGRPREAEVRFLCDEGAGISGDYIDRVDEPLSCSYVLTIRT R
Sbjct: 181 CDLNGRPREAEVRFLCDEGAGISGDYIDRVDEPLSCSYVLTIRTPRLCPHPLLRPPPSAA 240
Query: 750 XQAILCHPALQPEEYMAYIQRQADSEQNGDTARDGLQDLDPPTWSETKPGVGPTKKTGAS 929
QAILCHPALQPEEYMAY+QRQADS+Q GD A +G QD DPP WSETKPGV P KK GAS
Sbjct: 241 PQAILCHPALQPEEYMAYVQRQADSKQYGDRAIEGRQDPDPPVWSETKPGVVPPKKAGAS 300
Query: 930 PAKEDSKESDFWKMLHXXXXXXXXXXXXXXXXXXXXXXXXDPVPGSPDDFQNNVQVKVIR 1109
PAKE+SKESDFWKMLH DP P SPDDFQNNVQVKVIR
Sbjct: 301 PAKENSKESDFWKMLHEPEEQPPEKEETQAEEQEPNLEATDPPPTSPDDFQNNVQVKVIR 360
Query: 1110 SPADLIQLIEELKGGTRKGKPDAGQEQPADGATEAPPREPEVKEKSDPEHQNEV-XXXXX 1286
SPADLI+LIEELKGGTRKGKP+ GQEQP D ATE P REPE+KEK DPE QNEV
Sbjct: 361 SPADLIRLIEELKGGTRKGKPNTGQEQPGDSATEVPSREPEMKEKGDPEQQNEVEEEEDD 420
Query: 1287 XXXXXXXXXRQLLGEFEKELEGILLPSDRDRLRAEVKAGMERELENIIQETEKELDPDGL 1466
RQLLGEFEKELEGILLPSDR+RLRAEVKAGMERELENIIQETEKELDPDGL
Sbjct: 421 EDEDEDEDERQLLGEFEKELEGILLPSDRERLRAEVKAGMERELENIIQETEKELDPDGL 480
Query: 1467 KKESERDRAILALTSTLDKLIKRLEEKQNPELLKKHRKRRVIXXXXXXXXXXXXXXXXHR 1646
KKESERDRAILALTSTL+KLIKRLEEKQ+PEL+KKHRKRRV+ HR
Sbjct: 481 KKESERDRAILALTSTLNKLIKRLEEKQSPELMKKHRKRRVVPKKPPPSPQSTEEDPEHR 540
Query: 1647 VQVRIIKLRHGGPNRDLTVLQMKPETHS*NKSRGWGKNCWEREGPPAEGKIEIKIVQPG 1823
V+VR+ KLRHGGPN+DLTVL+MK E + G K+ EREG AEGKIEIKIV+PG
Sbjct: 541 VRVRVTKLRHGGPNQDLTVLEMKRENPQLKQIEGLVKDLLEREGLTAEGKIEIKIVRPG 599
>ref|XP_582765.3| PREDICTED: osteosarcoma amplified 9, endoplasmic reticulum lectin
[Bos taurus].
Length = 222
Score = 363 bits (931), Expect = e-100
Identities = 175/193 (90%), Positives = 176/193 (91%)
Frame = +3
Query: 30 MAAETXXXXXXXXXXXXXXXPANLTGGVGSLNLEELSEMRYGIEILPLPVMGGQNQASDV 209
MAAET PA LTGGVGSLNLEELSEMRYGIEILPLPVMGGQ+QASDV
Sbjct: 1 MAAETLLSSLLGLLLLGLLLPATLTGGVGSLNLEELSEMRYGIEILPLPVMGGQSQASDV 60
Query: 210 VIVSSKYKQRYECRLPAGAIHFQREREEEAPAYQGPGIPELLSPMKDAPCLLKTKDWWTY 389
VIVSSKYKQRYECRLPAGAIHFQREREEE PAYQGPGIPELLSPMKDAPCLLKTKDWWTY
Sbjct: 61 VIVSSKYKQRYECRLPAGAIHFQREREEETPAYQGPGIPELLSPMKDAPCLLKTKDWWTY 120
Query: 390 EFCYGRHIQQYHMEDSEIKGEVLYLGYYQSAFDWDDETAKASKQHRLKRYHSQTYGNGSK 569
EFCYGRHIQQYHMEDSEIKGEVLYLGYYQSAFDWDDETAKASKQHRLKRYHSQTYGNGSK
Sbjct: 121 EFCYGRHIQQYHMEDSEIKGEVLYLGYYQSAFDWDDETAKASKQHRLKRYHSQTYGNGSK 180
Query: 570 CDLNGRPREAEVR 608
CDLNGRPREAEVR
Sbjct: 181 CDLNGRPREAEVR 193
>ref|NP_001178336.1| endoplasmic reticulum lectin 1 [Bos taurus].
Length = 429
Score = 84.7 bits (208), Expect = 3e-16
Identities = 59/194 (30%), Positives = 93/194 (47%), Gaps = 17/194 (8%)
Frame = +3
Query: 171 LPVMGGQNQASDVVIVSSKYKQRYECRLPAGAIHFQREREEEAPAYQGPGIPELLSPM-K 347
LP G + + VI+++ +K++Y+C LP A EEE Y+GP ELL P+ K
Sbjct: 54 LPTTGVLYKEDNYVIMTTTHKEKYKCILPLVA----SGDEEEEKDYKGPNPRELLEPLFK 109
Query: 348 DAPCLLKTKDWWTYEFCYGRHIQQYHME---DSEIKGEVLYLGYYQSAFDWDDETAKASK 518
+ C + + +WTYE C+G+H++QYH E +I YLG + ++ +A +
Sbjct: 110 QSSCSYRIESYWTYEVCHGKHVRQYHEEKESGQKINIHEYYLGNMLAKNLLSEKEQEAKE 169
Query: 519 QHRLKR------------YHSQTYGNGSKCDL-NGRPREAEVRFLCDEGAGISGDYIDRV 659
+ + K Y+ GNG+ C L RPR + V ++C S I V
Sbjct: 170 EEKSKEIPTKNIEGQMTPYYPVGMGNGTPCSLKQNRPRSSTVMYICHPE---SKHEILSV 226
Query: 660 DEPLSCSYVLTIRT 701
E +C Y + I T
Sbjct: 227 AEVTTCEYEVVILT 240
Score = 68.6 bits (166), Expect = 2e-11
Identities = 37/120 (30%), Positives = 57/120 (47%), Gaps = 12/120 (10%)
Frame = +3
Query: 378 WWTYEFCYGRHIQQYHMEDSEIKGEVLYLGYYQSAFDWDDETAKASKQHRLKRYH----- 542
WW YEFCYG+H+ QYH + K V+ + Q +E + +K++ + YH
Sbjct: 297 WWKYEFCYGKHVHQYHEDKDNGKTSVVVGTWNQ------EEHIEWAKKNTARAYHLQDDG 350
Query: 543 -------SQTYGNGSKCDLNGRPREAEVRFLCDEGAGISGDYIDRVDEPLSCSYVLTIRT 701
S YGNG CD+ +PR+ V+ C E + + EP SC Y+L + +
Sbjct: 351 TQTVRMVSHFYGNGDICDITDKPRQVTVKLKCKESDSPHAVTVYML-EPHSCQYILGVES 409
>ref|XP_002691369.1| PREDICTED: endoplasmic reticulum lectin 1 isoform 3 [Bos taurus].
Length = 429
Score = 84.7 bits (208), Expect = 3e-16
Identities = 59/194 (30%), Positives = 93/194 (47%), Gaps = 17/194 (8%)
Frame = +3
Query: 171 LPVMGGQNQASDVVIVSSKYKQRYECRLPAGAIHFQREREEEAPAYQGPGIPELLSPM-K 347
LP G + + VI+++ +K++Y+C LP A EEE Y+GP ELL P+ K
Sbjct: 54 LPTTGVLYKEDNYVIMTTTHKEKYKCILPLVA----SGDEEEEKDYKGPNPRELLEPLFK 109
Query: 348 DAPCLLKTKDWWTYEFCYGRHIQQYHME---DSEIKGEVLYLGYYQSAFDWDDETAKASK 518
+ C + + +WTYE C+G+H++QYH E +I YLG + ++ +A +
Sbjct: 110 QSSCSYRIESYWTYEVCHGKHVRQYHEEKESGQKINIHEYYLGNMLAKNLLSEKEQEAKE 169
Query: 519 QHRLKR------------YHSQTYGNGSKCDL-NGRPREAEVRFLCDEGAGISGDYIDRV 659
+ + K Y+ GNG+ C L RPR + V ++C S I V
Sbjct: 170 EEKSKEIPTKNIEGQMTPYYPVGMGNGTPCSLKQNRPRSSTVMYICHPE---SKHEILSV 226
Query: 660 DEPLSCSYVLTIRT 701
E +C Y + I T
Sbjct: 227 AEVTTCEYEVVILT 240
Score = 68.6 bits (166), Expect = 2e-11
Identities = 37/120 (30%), Positives = 57/120 (47%), Gaps = 12/120 (10%)
Frame = +3
Query: 378 WWTYEFCYGRHIQQYHMEDSEIKGEVLYLGYYQSAFDWDDETAKASKQHRLKRYH----- 542
WW YEFCYG+H+ QYH + K V+ + Q +E + +K++ + YH
Sbjct: 297 WWKYEFCYGKHVHQYHEDKDNGKTSVVVGTWNQ------EEHIEWAKKNTARAYHLQDDG 350
Query: 543 -------SQTYGNGSKCDLNGRPREAEVRFLCDEGAGISGDYIDRVDEPLSCSYVLTIRT 701
S YGNG CD+ +PR+ V+ C E + + EP SC Y+L + +
Sbjct: 351 TQTVRMVSHFYGNGDICDITDKPRQVTVKLKCKESDSPHAVTVYML-EPHSCQYILGVES 409
>ref|XP_002691368.1| PREDICTED: endoplasmic reticulum lectin 1 isoform 2 [Bos taurus].
Length = 457
Score = 84.7 bits (208), Expect = 3e-16
Identities = 59/194 (30%), Positives = 93/194 (47%), Gaps = 17/194 (8%)
Frame = +3
Query: 171 LPVMGGQNQASDVVIVSSKYKQRYECRLPAGAIHFQREREEEAPAYQGPGIPELLSPM-K 347
LP G + + VI+++ +K++Y+C LP A EEE Y+GP ELL P+ K
Sbjct: 54 LPTTGVLYKEDNYVIMTTTHKEKYKCILPLVA----SGDEEEEKDYKGPNPRELLEPLFK 109
Query: 348 DAPCLLKTKDWWTYEFCYGRHIQQYHME---DSEIKGEVLYLGYYQSAFDWDDETAKASK 518
+ C + + +WTYE C+G+H++QYH E +I YLG + ++ +A +
Sbjct: 110 QSSCSYRIESYWTYEVCHGKHVRQYHEEKESGQKINIHEYYLGNMLAKNLLSEKEQEAKE 169
Query: 519 QHRLKR------------YHSQTYGNGSKCDL-NGRPREAEVRFLCDEGAGISGDYIDRV 659
+ + K Y+ GNG+ C L RPR + V ++C S I V
Sbjct: 170 EEKSKEIPTKNIEGQMTPYYPVGMGNGTPCSLKQNRPRSSTVMYICHPE---SKHEILSV 226
Query: 660 DEPLSCSYVLTIRT 701
E +C Y + I T
Sbjct: 227 AEVTTCEYEVVILT 240
Score = 51.6 bits (122), Expect = 2e-06
Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 1/109 (0%)
Frame = +3
Query: 378 WWTYEFCYGRHIQQYHMEDSEIKGEVLYLGYYQSAFDWDDETAKASKQHRLKRYHSQTYG 557
WW YEFCYG+H+ QYH + K V+ + Q +E + +K++ + YH Q G
Sbjct: 351 WWKYEFCYGKHVHQYHEDKDNGKTSVVVGTWNQ------EEHIEWAKKNTARAYHLQDDG 404
Query: 558 NGS-KCDLNGRPREAEVRFLCDEGAGISGDYIDRVDEPLSCSYVLTIRT 701
+ +C + P V L EP SC Y+L + +
Sbjct: 405 TQTVRCKESDSPHAVTVYML----------------EPHSCQYILGVES 437
>ref|XP_002691367.1| PREDICTED: endoplasmic reticulum lectin 1 isoform 1 [Bos taurus].
Length = 483
Score = 84.7 bits (208), Expect = 3e-16
Identities = 59/194 (30%), Positives = 93/194 (47%), Gaps = 17/194 (8%)
Frame = +3
Query: 171 LPVMGGQNQASDVVIVSSKYKQRYECRLPAGAIHFQREREEEAPAYQGPGIPELLSPM-K 347
LP G + + VI+++ +K++Y+C LP A EEE Y+GP ELL P+ K
Sbjct: 54 LPTTGVLYKEDNYVIMTTTHKEKYKCILPLVA----SGDEEEEKDYKGPNPRELLEPLFK 109
Query: 348 DAPCLLKTKDWWTYEFCYGRHIQQYHME---DSEIKGEVLYLGYYQSAFDWDDETAKASK 518
+ C + + +WTYE C+G+H++QYH E +I YLG + ++ +A +
Sbjct: 110 QSSCSYRIESYWTYEVCHGKHVRQYHEEKESGQKINIHEYYLGNMLAKNLLSEKEQEAKE 169
Query: 519 QHRLKR------------YHSQTYGNGSKCDL-NGRPREAEVRFLCDEGAGISGDYIDRV 659
+ + K Y+ GNG+ C L RPR + V ++C S I V
Sbjct: 170 EEKSKEIPTKNIEGQMTPYYPVGMGNGTPCSLKQNRPRSSTVMYICHPE---SKHEILSV 226
Query: 660 DEPLSCSYVLTIRT 701
E +C Y + I T
Sbjct: 227 AEVTTCEYEVVILT 240
Score = 68.6 bits (166), Expect = 2e-11
Identities = 37/120 (30%), Positives = 57/120 (47%), Gaps = 12/120 (10%)
Frame = +3
Query: 378 WWTYEFCYGRHIQQYHMEDSEIKGEVLYLGYYQSAFDWDDETAKASKQHRLKRYH----- 542
WW YEFCYG+H+ QYH + K V+ + Q +E + +K++ + YH
Sbjct: 351 WWKYEFCYGKHVHQYHEDKDNGKTSVVVGTWNQ------EEHIEWAKKNTARAYHLQDDG 404
Query: 543 -------SQTYGNGSKCDLNGRPREAEVRFLCDEGAGISGDYIDRVDEPLSCSYVLTIRT 701
S YGNG CD+ +PR+ V+ C E + + EP SC Y+L + +
Sbjct: 405 TQTVRMVSHFYGNGDICDITDKPRQVTVKLKCKESDSPHAVTVYML-EPHSCQYILGVES 463
>ref|XP_002700808.1| PREDICTED: endoplasmic reticulum lectin 1 [Bos taurus].
Length = 457
Score = 84.7 bits (208), Expect = 3e-16
Identities = 59/194 (30%), Positives = 93/194 (47%), Gaps = 17/194 (8%)
Frame = +3
Query: 171 LPVMGGQNQASDVVIVSSKYKQRYECRLPAGAIHFQREREEEAPAYQGPGIPELLSPM-K 347
LP G + + VI+++ +K++Y+C LP A EEE Y+GP ELL P+ K
Sbjct: 54 LPTTGVLYKEDNYVIMTTTHKEKYKCILPLVA----SGDEEEEKDYKGPNPRELLEPLFK 109
Query: 348 DAPCLLKTKDWWTYEFCYGRHIQQYHME---DSEIKGEVLYLGYYQSAFDWDDETAKASK 518
+ C + + +WTYE C+G+H++QYH E +I YLG + ++ +A +
Sbjct: 110 QSSCSYRIESYWTYEVCHGKHVRQYHEEKESGQKINIHEYYLGNMLAKNLLSEKEQEAKE 169
Query: 519 QHRLKR------------YHSQTYGNGSKCDL-NGRPREAEVRFLCDEGAGISGDYIDRV 659
+ + K Y+ GNG+ C L RPR + V ++C S I V
Sbjct: 170 EEKSKEIPTKNIEGQMTPYYPVGMGNGTPCSLKQNRPRSSTVMYICHPE---SKHEILSV 226
Query: 660 DEPLSCSYVLTIRT 701
E +C Y + I T
Sbjct: 227 AEVTTCEYEVVILT 240
Score = 51.6 bits (122), Expect = 2e-06
Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 1/109 (0%)
Frame = +3
Query: 378 WWTYEFCYGRHIQQYHMEDSEIKGEVLYLGYYQSAFDWDDETAKASKQHRLKRYHSQTYG 557
WW YEFCYG+H+ QYH + K V+ + Q +E + +K++ + YH Q G
Sbjct: 351 WWKYEFCYGKHVHQYHEDKDNGKTSVVVGTWNQ------EEHIEWAKKNTARAYHLQDDG 404
Query: 558 NGS-KCDLNGRPREAEVRFLCDEGAGISGDYIDRVDEPLSCSYVLTIRT 701
+ +C + P V L EP SC Y+L + +
Sbjct: 405 TQTVRCKESDSPHAVTVYML----------------EPHSCQYILGVES 437
>ref|XP_001249693.1| PREDICTED: endoplasmic reticulum lectin 1 isoform 1 [Bos taurus].
Length = 483
Score = 84.7 bits (208), Expect = 3e-16
Identities = 59/194 (30%), Positives = 93/194 (47%), Gaps = 17/194 (8%)
Frame = +3
Query: 171 LPVMGGQNQASDVVIVSSKYKQRYECRLPAGAIHFQREREEEAPAYQGPGIPELLSPM-K 347
LP G + + VI+++ +K++Y+C LP A EEE Y+GP ELL P+ K
Sbjct: 54 LPTTGVLYKEDNYVIMTTTHKEKYKCILPLVA----SGDEEEEKDYKGPNPRELLEPLFK 109
Query: 348 DAPCLLKTKDWWTYEFCYGRHIQQYHME---DSEIKGEVLYLGYYQSAFDWDDETAKASK 518
+ C + + +WTYE C+G+H++QYH E +I YLG + ++ +A +
Sbjct: 110 QSSCSYRIESYWTYEVCHGKHVRQYHEEKESGQKINIHEYYLGNMLAKNLLSEKEQEAKE 169
Query: 519 QHRLKR------------YHSQTYGNGSKCDL-NGRPREAEVRFLCDEGAGISGDYIDRV 659
+ + K Y+ GNG+ C L RPR + V ++C S I V
Sbjct: 170 EEKSKEIPTKNIEGQMTPYYPVGMGNGTPCSLKQNRPRSSTVMYICHPE---SKHEILSV 226
Query: 660 DEPLSCSYVLTIRT 701
E +C Y + I T
Sbjct: 227 AEVTTCEYEVVILT 240
Score = 68.6 bits (166), Expect = 2e-11
Identities = 37/120 (30%), Positives = 57/120 (47%), Gaps = 12/120 (10%)
Frame = +3
Query: 378 WWTYEFCYGRHIQQYHMEDSEIKGEVLYLGYYQSAFDWDDETAKASKQHRLKRYH----- 542
WW YEFCYG+H+ QYH + K V+ + Q +E + +K++ + YH
Sbjct: 351 WWKYEFCYGKHVHQYHEDKDNGKTSVVVGTWNQ------EEHIEWAKKNTARAYHLQDDG 404
Query: 543 -------SQTYGNGSKCDLNGRPREAEVRFLCDEGAGISGDYIDRVDEPLSCSYVLTIRT 701
S YGNG CD+ +PR+ V+ C E + + EP SC Y+L + +
Sbjct: 405 TQTVRMVSHFYGNGDICDITDKPRQVTVKLKCKESDSPHAVTVYML-EPHSCQYILGVES 463
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 73,195,317
Number of extensions: 2070466
Number of successful extensions: 8396
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 8343
Number of HSP's successfully gapped: 14
Length of query: 644
Length of database: 17,681,374
Length adjustment: 109
Effective length of query: 535
Effective length of database: 14,074,782
Effective search space: 7530008370
Effective search space used: 7530008370
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002502
(1932 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_531650.2| PREDICTED: similar to Protein OS-9 precursor is... 847 0.0
Alignment gi|XP_859875.1| PREDICTED: similar to amplified in osteosarcoma... 816 0.0
Alignment gi|XP_859838.1| PREDICTED: similar to amplified in osteosarcoma... 786 0.0
Alignment gi|XP_859911.1| PREDICTED: similar to amplified in osteosarcoma... 751 0.0
Alignment gi|XP_865061.1| PREDICTED: similar to chromosome 2 open reading... 83 8e-16
Alignment gi|XP_865044.1| PREDICTED: similar to chromosome 2 open reading... 83 8e-16
Alignment gi|XP_531822.2| PREDICTED: similar to chromosome 2 open reading... 83 8e-16
Alignment gi|XP_865097.1| PREDICTED: similar to chromosome 2 open reading... 83 1e-15
Alignment gi|XP_865081.1| PREDICTED: similar to chromosome 2 open reading... 82 2e-15
>ref|XP_531650.2| PREDICTED: similar to Protein OS-9 precursor isoform 1 [Canis
familiaris].
Length = 669
Score = 847 bits (2189), Expect = 0.0
Identities = 438/601 (72%), Positives = 467/601 (77%), Gaps = 3/601 (0%)
Frame = +3
Query: 30 MAAETXXXXXXXXXXXXXXXPANLTGGVGSLNLEELSEMRYGIEILPLPVMGGQNQASDV 209
MAAE+ PA+LTGGVGSLNLEELSEMRYGIEILPLPVMGGQ+QASDV
Sbjct: 1 MAAESLLSGLLRLLLLGLLLPASLTGGVGSLNLEELSEMRYGIEILPLPVMGGQSQASDV 60
Query: 210 VIVSSKYKQRYECRLPAGAIHFQREREEEAPAYQGPGIPELLSPMKDAPCLLKTKDWWTY 389
VIVSSKYKQRYECRLPAGAIHFQREREEEAPAY+GPGIPELLSPMKDAPCLLKTKDWWTY
Sbjct: 61 VIVSSKYKQRYECRLPAGAIHFQREREEEAPAYRGPGIPELLSPMKDAPCLLKTKDWWTY 120
Query: 390 EFCYGRHIQQYHMEDSEIKGEVLYLGYYQSAFDWDDETAKASKQHRLKRYHSQTYGNGSK 569
EFCYGRHIQQYHMEDSEIKGEVLYLGYYQSAFDWDDETAKASKQHRLKRYHSQTYGNGSK
Sbjct: 121 EFCYGRHIQQYHMEDSEIKGEVLYLGYYQSAFDWDDETAKASKQHRLKRYHSQTYGNGSK 180
Query: 570 CDLNGRPREAEVRFLCDEGAGISGDYIDRVDEPLSCSYVLTIRTSRXXXXXXXXXXXXXX 749
CDLNGRPREAEVRFLCDEGAGISGDYIDRVDEPLSCSYVLT+RT R
Sbjct: 181 CDLNGRPREAEVRFLCDEGAGISGDYIDRVDEPLSCSYVLTVRTPRLCPHPLLRPPPSAA 240
Query: 750 XQAILCHPALQPEEYMAYIQRQA-DSEQNGDTARDGLQDLDPPTWSETKPGVGPTKKTGA 926
QAILCHPALQPEEYMAYIQRQA DS+Q GD A + LQDL+P TW E +P P+K+ GA
Sbjct: 241 PQAILCHPALQPEEYMAYIQRQAVDSKQYGDKALEELQDLEPQTWGEAQPRAVPSKRGGA 300
Query: 927 SPAKEDSKESDFWKMLHXXXXXXXXXXXXXXXXXXXXXXXXDPVPGSPDDFQNNVQVKVI 1106
P K+DSKESDFWKML DP P P DFQNNVQVKVI
Sbjct: 301 HPTKDDSKESDFWKMLPEPQEQTPGATEMPAEEQEPNLEAADPAPAPPHDFQNNVQVKVI 360
Query: 1107 RSPADLIQLIEELKGGTRKGKPDAGQEQPADGATEAPPREPEVKEKSDPEHQNEV--XXX 1280
RSPADLI+LIEELKGGT+KGKP+ GQEQP A E P RE E K+KSD +HQNEV
Sbjct: 361 RSPADLIRLIEELKGGTKKGKPNGGQEQPVGEAAEVPQREAEEKDKSDMDHQNEVEEEEE 420
Query: 1281 XXXXXXXXXXXRQLLGEFEKELEGILLPSDRDRLRAEVKAGMERELENIIQETEKELDPD 1460
+QLLGEFEKELEGILLPSDRDRLR+EVKAGMERELE IIQETEKELDPD
Sbjct: 421 EEEDEDEDEDEQQLLGEFEKELEGILLPSDRDRLRSEVKAGMERELETIIQETEKELDPD 480
Query: 1461 GLKKESERDRAILALTSTLDKLIKRLEEKQNPELLKKHRKRRVIXXXXXXXXXXXXXXXX 1640
GLKKESERDRA+LALTSTL+KLIKRLEEKQ+PEL+KKHRKRRV
Sbjct: 481 GLKKESERDRAMLALTSTLNKLIKRLEEKQSPELVKKHRKRRVAPKKPPPSPPPAEEDPE 540
Query: 1641 HRVQVRIIKLRHGGPNRDLTVLQMKPETHS*NKSRGWGKNCWEREGPPAEGKIEIKIVQP 1820
HRV+VR+ KLRHGGPN+DLTVL+MK E + G K EREG AEGKIEIKIV+P
Sbjct: 541 HRVRVRVTKLRHGGPNQDLTVLEMKRENPQLKQIEGLVKELLEREGLTAEGKIEIKIVRP 600
Query: 1821 G 1823
G
Sbjct: 601 G 601
>ref|XP_859875.1| PREDICTED: similar to amplified in osteosarcoma isoform 4 precursor
isoform 3 [Canis familiaris].
Length = 653
Score = 816 bits (2109), Expect = 0.0
Identities = 424/600 (70%), Positives = 453/600 (75%), Gaps = 2/600 (0%)
Frame = +3
Query: 30 MAAETXXXXXXXXXXXXXXXPANLTGGVGSLNLEELSEMRYGIEILPLPVMGGQNQASDV 209
MAAE+ PA+LTGGVGSLNLEELSEMRYGIEILPLPVMGGQ+QASDV
Sbjct: 1 MAAESLLSGLLRLLLLGLLLPASLTGGVGSLNLEELSEMRYGIEILPLPVMGGQSQASDV 60
Query: 210 VIVSSKYKQRYECRLPAGAIHFQREREEEAPAYQGPGIPELLSPMKDAPCLLKTKDWWTY 389
VIVSSKYKQRYECRLPAGAIHFQREREEEAPAY+GPGIPELLSPMKDAPCLLKTKDWWTY
Sbjct: 61 VIVSSKYKQRYECRLPAGAIHFQREREEEAPAYRGPGIPELLSPMKDAPCLLKTKDWWTY 120
Query: 390 EFCYGRHIQQYHMEDSEIKGEVLYLGYYQSAFDWDDETAKASKQHRLKRYHSQTYGNGSK 569
EFCYGRHIQQYHMEDSEIKGEVLYLGYYQSAFDWDDETAKASKQHRLKRYHSQTYGNGSK
Sbjct: 121 EFCYGRHIQQYHMEDSEIKGEVLYLGYYQSAFDWDDETAKASKQHRLKRYHSQTYGNGSK 180
Query: 570 CDLNGRPREAEVRFLCDEGAGISGDYIDRVDEPLSCSYVLTIRTSRXXXXXXXXXXXXXX 749
CDLNGRPREAEVRFLCDEGAGISGDYIDRVDEPLSCSYVLT+RT R
Sbjct: 181 CDLNGRPREAEVRFLCDEGAGISGDYIDRVDEPLSCSYVLTVRTPRLCPHPLLRPPPSAA 240
Query: 750 XQAILCHPALQPEEYMAYIQRQADSEQNGDTARDGLQDLDPPTWSETKPGVGPTKKTGAS 929
QAILCHPALQPEEYMAYIQRQADS+Q GD A + LQDL+P TW E +P P+K+ GA
Sbjct: 241 PQAILCHPALQPEEYMAYIQRQADSKQYGDKALEELQDLEPQTWGEAQPRAVPSKRGGAH 300
Query: 930 PAKEDSKESDFWKMLHXXXXXXXXXXXXXXXXXXXXXXXXDPVPGSPDDFQNNVQVKVIR 1109
P K+DSKESDFWKML DP P P DFQNNVQVKVIR
Sbjct: 301 PTKDDSKESDFWKMLPEPQEQTPGATEMPAEEQEPNLEAADPAPAPPHDFQNNVQVKVIR 360
Query: 1110 SPADLIQLIEELKGGTRKGKPDAGQEQPADGATEAPPREPEVKEKSDPEHQNEV--XXXX 1283
SPADLI+LIEELKGGT+KGKP+ GQEQP A E P RE E K+KSD +HQNEV
Sbjct: 361 SPADLIRLIEELKGGTKKGKPNGGQEQPVGEAAEVPQREAEEKDKSDMDHQNEVEEEEEE 420
Query: 1284 XXXXXXXXXXRQLLGEFEKELEGILLPSDRDRLRAEVKAGMERELENIIQETEKELDPDG 1463
+QLLGEFEKELEGILLPSDRDRLR+ ETEKELDPDG
Sbjct: 421 EEDEDEDEDEQQLLGEFEKELEGILLPSDRDRLRS---------------ETEKELDPDG 465
Query: 1464 LKKESERDRAILALTSTLDKLIKRLEEKQNPELLKKHRKRRVIXXXXXXXXXXXXXXXXH 1643
LKKESERDRA+LALTSTL+KLIKRLEEKQ+PEL+KKHRKRRV H
Sbjct: 466 LKKESERDRAMLALTSTLNKLIKRLEEKQSPELVKKHRKRRVAPKKPPPSPPPAEEDPEH 525
Query: 1644 RVQVRIIKLRHGGPNRDLTVLQMKPETHS*NKSRGWGKNCWEREGPPAEGKIEIKIVQPG 1823
RV+VR+ KLRHGGPN+DLTVL+MK E + G K EREG AEGKIEIKIV+PG
Sbjct: 526 RVRVRVTKLRHGGPNQDLTVLEMKRENPQLKQIEGLVKELLEREGLTAEGKIEIKIVRPG 585
>ref|XP_859838.1| PREDICTED: similar to amplified in osteosarcoma isoform 2 precursor
isoform 2 [Canis familiaris].
Length = 613
Score = 786 bits (2030), Expect = 0.0
Identities = 399/522 (76%), Positives = 422/522 (80%), Gaps = 2/522 (0%)
Frame = +3
Query: 30 MAAETXXXXXXXXXXXXXXXPANLTGGVGSLNLEELSEMRYGIEILPLPVMGGQNQASDV 209
MAAE+ PA+LTGGVGSLNLEELSEMRYGIEILPLPVMGGQ+QASDV
Sbjct: 1 MAAESLLSGLLRLLLLGLLLPASLTGGVGSLNLEELSEMRYGIEILPLPVMGGQSQASDV 60
Query: 210 VIVSSKYKQRYECRLPAGAIHFQREREEEAPAYQGPGIPELLSPMKDAPCLLKTKDWWTY 389
VIVSSKYKQRYECRLPAGAIHFQREREEEAPAY+GPGIPELLSPMKDAPCLLKTKDWWTY
Sbjct: 61 VIVSSKYKQRYECRLPAGAIHFQREREEEAPAYRGPGIPELLSPMKDAPCLLKTKDWWTY 120
Query: 390 EFCYGRHIQQYHMEDSEIKGEVLYLGYYQSAFDWDDETAKASKQHRLKRYHSQTYGNGSK 569
EFCYGRHIQQYHMEDSEIKGEVLYLGYYQSAFDWDDETAKASKQHRLKRYHSQTYGNGSK
Sbjct: 121 EFCYGRHIQQYHMEDSEIKGEVLYLGYYQSAFDWDDETAKASKQHRLKRYHSQTYGNGSK 180
Query: 570 CDLNGRPREAEVRFLCDEGAGISGDYIDRVDEPLSCSYVLTIRTSRXXXXXXXXXXXXXX 749
CDLNGRPREAEVRFLCDEGAGISGDYIDRVDEPLSCSYVLT+RT R
Sbjct: 181 CDLNGRPREAEVRFLCDEGAGISGDYIDRVDEPLSCSYVLTVRTPRLCPHPLLRPPPSAA 240
Query: 750 XQAILCHPALQPEEYMAYIQRQADSEQNGDTARDGLQDLDPPTWSETKPGVGPTKKTGAS 929
QAILCHPALQPEEYMAYIQRQADS+Q GD A + LQDL+P TW E +P P+K+ GA
Sbjct: 241 PQAILCHPALQPEEYMAYIQRQADSKQYGDKALEELQDLEPQTWGEAQPRAVPSKRGGAH 300
Query: 930 PAKEDSKESDFWKMLHXXXXXXXXXXXXXXXXXXXXXXXXDPVPGSPDDFQNNVQVKVIR 1109
P K+DSKESDFWKML DP P P DFQNNVQVKVIR
Sbjct: 301 PTKDDSKESDFWKMLPEPQEQTPGATEMPAEEQEPNLEAADPAPAPPHDFQNNVQVKVIR 360
Query: 1110 SPADLIQLIEELKGGTRKGKPDAGQEQPADGATEAPPREPEVKEKSDPEHQNEV--XXXX 1283
SPADLI+LIEELKGGT+KGKP+ GQEQP A E P RE E K+KSD +HQNEV
Sbjct: 361 SPADLIRLIEELKGGTKKGKPNGGQEQPVGEAAEVPQREAEEKDKSDMDHQNEVEEEEEE 420
Query: 1284 XXXXXXXXXXRQLLGEFEKELEGILLPSDRDRLRAEVKAGMERELENIIQETEKELDPDG 1463
+QLLGEFEKELEGILLPSDRDRLR+EVKAGMERELE IIQETEKELDPDG
Sbjct: 421 EEDEDEDEDEQQLLGEFEKELEGILLPSDRDRLRSEVKAGMERELETIIQETEKELDPDG 480
Query: 1464 LKKESERDRAILALTSTLDKLIKRLEEKQNPELLKKHRKRRV 1589
LKKESERDRA+LALTSTL+KLIKRLEEKQ+PEL+KKHRKRRV
Sbjct: 481 LKKESERDRAMLALTSTLNKLIKRLEEKQSPELVKKHRKRRV 522
>ref|XP_859911.1| PREDICTED: similar to amplified in osteosarcoma isoform 3 precursor
isoform 4 [Canis familiaris].
Length = 598
Score = 751 bits (1938), Expect = 0.0
Identities = 385/522 (73%), Positives = 408/522 (78%), Gaps = 2/522 (0%)
Frame = +3
Query: 30 MAAETXXXXXXXXXXXXXXXPANLTGGVGSLNLEELSEMRYGIEILPLPVMGGQNQASDV 209
MAAE+ PA+LTGGVGSLNLEELSEMRYGIEILPLPVMGGQ+QASDV
Sbjct: 1 MAAESLLSGLLRLLLLGLLLPASLTGGVGSLNLEELSEMRYGIEILPLPVMGGQSQASDV 60
Query: 210 VIVSSKYKQRYECRLPAGAIHFQREREEEAPAYQGPGIPELLSPMKDAPCLLKTKDWWTY 389
VIVSSKYKQRYECRLPAGAIHFQREREEEAPAY+GPGIPELLSPMKDAPCLLKTKDWWTY
Sbjct: 61 VIVSSKYKQRYECRLPAGAIHFQREREEEAPAYRGPGIPELLSPMKDAPCLLKTKDWWTY 120
Query: 390 EFCYGRHIQQYHMEDSEIKGEVLYLGYYQSAFDWDDETAKASKQHRLKRYHSQTYGNGSK 569
EFCYGRHIQQYHMEDSEIKGEVLYLGYYQSAFDWDDETAKASKQHRLKRYHSQTYGNGSK
Sbjct: 121 EFCYGRHIQQYHMEDSEIKGEVLYLGYYQSAFDWDDETAKASKQHRLKRYHSQTYGNGSK 180
Query: 570 CDLNGRPREAEVRFLCDEGAGISGDYIDRVDEPLSCSYVLTIRTSRXXXXXXXXXXXXXX 749
CDLNGRPREAEVRFLCDEGAGISGDYIDRVDEPLSCSYVLT+RT R
Sbjct: 181 CDLNGRPREAEVRFLCDEGAGISGDYIDRVDEPLSCSYVLTVRTPRLCPHPLLRPPPSAA 240
Query: 750 XQAILCHPALQPEEYMAYIQRQADSEQNGDTARDGLQDLDPPTWSETKPGVGPTKKTGAS 929
QAILCHPALQPEEYMAYIQRQADS+Q GD A + LQDL+P TW E +P P+K+ GA
Sbjct: 241 PQAILCHPALQPEEYMAYIQRQADSKQYGDKALEELQDLEPQTWGEAQPRAVPSKRGGAH 300
Query: 930 PAKEDSKESDFWKMLHXXXXXXXXXXXXXXXXXXXXXXXXDPVPGSPDDFQNNVQVKVIR 1109
P K+DSKESDFWKML DP P P DFQNNVQVKVIR
Sbjct: 301 PTKDDSKESDFWKMLPEPQEQTPGATEMPAEEQEPNLEAADPAPAPPHDFQNNVQVKVIR 360
Query: 1110 SPADLIQLIEELKGGTRKGKPDAGQEQPADGATEAPPREPEVKEKSDPEHQNEV--XXXX 1283
SPADLI+LIEELKGGT+KGKP+ GQEQP A E P RE E K+KSD +HQNEV
Sbjct: 361 SPADLIRLIEELKGGTKKGKPNGGQEQPVGEAAEVPQREAEEKDKSDMDHQNEVEEEEEE 420
Query: 1284 XXXXXXXXXXRQLLGEFEKELEGILLPSDRDRLRAEVKAGMERELENIIQETEKELDPDG 1463
+QLLGEFEKELEGILLPSDRDRLR+ ETEKELDPDG
Sbjct: 421 EEDEDEDEDEQQLLGEFEKELEGILLPSDRDRLRS---------------ETEKELDPDG 465
Query: 1464 LKKESERDRAILALTSTLDKLIKRLEEKQNPELLKKHRKRRV 1589
LKKESERDRA+LALTSTL+KLIKRLEEKQ+PEL+KKHRKRRV
Sbjct: 466 LKKESERDRAMLALTSTLNKLIKRLEEKQSPELVKKHRKRRV 507
>ref|XP_865061.1| PREDICTED: similar to chromosome 2 open reading frame 30 isoform 3
[Canis familiaris].
Length = 445
Score = 83.2 bits (204), Expect = 8e-16
Identities = 58/194 (29%), Positives = 92/194 (47%), Gaps = 17/194 (8%)
Frame = +3
Query: 171 LPVMGGQNQASDVVIVSSKYKQRYECRLPAGAIHFQREREEEAPAYQGPGIPELLSPM-K 347
LP G + + VI+++ +K++Y+C LP EEE Y+GP ELL P+ K
Sbjct: 70 LPTTGVLYKEDNYVIMTTTHKEKYKCILPL----VTSGDEEEEKDYKGPNPRELLEPLFK 125
Query: 348 DAPCLLKTKDWWTYEFCYGRHIQQYHME---DSEIKGEVLYLGYYQSAFDWDDETAKASK 518
+ C + + +WTYE C+G+HI+QYH E ++ YLG + ++ +A +
Sbjct: 126 QSSCSYRIESYWTYEVCHGKHIRQYHEEKESGQKVNIHEYYLGNMLAKNLLSEKDQEADE 185
Query: 519 QHRLKR------------YHSQTYGNGSKCDL-NGRPREAEVRFLCDEGAGISGDYIDRV 659
+ + K Y+ GNG+ C L RPR + V ++C S I V
Sbjct: 186 KEKSKEIPTKNIEGQMTPYYPVGMGNGTPCSLKQNRPRSSTVMYICHPE---SKHEILSV 242
Query: 660 DEPLSCSYVLTIRT 701
E +C Y + I T
Sbjct: 243 AEVTTCEYEVVILT 256
Score = 67.4 bits (163), Expect = 5e-11
Identities = 37/120 (30%), Positives = 56/120 (46%), Gaps = 12/120 (10%)
Frame = +3
Query: 378 WWTYEFCYGRHIQQYHMEDSEIKGEVLYLGYYQSAFDWDDETAKASKQHRLKRYH----- 542
WW YEFCYG+H+ QYH + K V+ + Q +E +K++ + YH
Sbjct: 313 WWKYEFCYGKHVHQYHEDKDSGKTSVVVGTWNQ------EEHIAWAKKNPARAYHLQDDG 366
Query: 543 -------SQTYGNGSKCDLNGRPREAEVRFLCDEGAGISGDYIDRVDEPLSCSYVLTIRT 701
S YGNG CD+ +PR+ V+ C E + + EP SC Y+L + +
Sbjct: 367 TQTVRMVSHFYGNGDICDITDKPRQVTVKLKCKESDSPHAVTVYML-EPHSCQYILGVES 425
>ref|XP_865044.1| PREDICTED: similar to chromosome 2 open reading frame 30 isoform 2
[Canis familiaris].
Length = 473
Score = 83.2 bits (204), Expect = 8e-16
Identities = 58/194 (29%), Positives = 92/194 (47%), Gaps = 17/194 (8%)
Frame = +3
Query: 171 LPVMGGQNQASDVVIVSSKYKQRYECRLPAGAIHFQREREEEAPAYQGPGIPELLSPM-K 347
LP G + + VI+++ +K++Y+C LP EEE Y+GP ELL P+ K
Sbjct: 70 LPTTGVLYKEDNYVIMTTTHKEKYKCILPL----VTSGDEEEEKDYKGPNPRELLEPLFK 125
Query: 348 DAPCLLKTKDWWTYEFCYGRHIQQYHME---DSEIKGEVLYLGYYQSAFDWDDETAKASK 518
+ C + + +WTYE C+G+HI+QYH E ++ YLG + ++ +A +
Sbjct: 126 QSSCSYRIESYWTYEVCHGKHIRQYHEEKESGQKVNIHEYYLGNMLAKNLLSEKDQEADE 185
Query: 519 QHRLKR------------YHSQTYGNGSKCDL-NGRPREAEVRFLCDEGAGISGDYIDRV 659
+ + K Y+ GNG+ C L RPR + V ++C S I V
Sbjct: 186 KEKSKEIPTKNIEGQMTPYYPVGMGNGTPCSLKQNRPRSSTVMYICHPE---SKHEILSV 242
Query: 660 DEPLSCSYVLTIRT 701
E +C Y + I T
Sbjct: 243 AEVTTCEYEVVILT 256
Score = 50.4 bits (119), Expect = 6e-06
Identities = 31/109 (28%), Positives = 47/109 (43%), Gaps = 1/109 (0%)
Frame = +3
Query: 378 WWTYEFCYGRHIQQYHMEDSEIKGEVLYLGYYQSAFDWDDETAKASKQHRLKRYHSQTYG 557
WW YEFCYG+H+ QYH + K V+ + Q +E +K++ + YH Q G
Sbjct: 367 WWKYEFCYGKHVHQYHEDKDSGKTSVVVGTWNQ------EEHIAWAKKNPARAYHLQDDG 420
Query: 558 NGS-KCDLNGRPREAEVRFLCDEGAGISGDYIDRVDEPLSCSYVLTIRT 701
+ +C + P V L EP SC Y+L + +
Sbjct: 421 TQTVRCKESDSPHAVTVYML----------------EPHSCQYILGVES 453
>ref|XP_531822.2| PREDICTED: similar to chromosome 2 open reading frame 30 isoform 1
[Canis familiaris].
Length = 499
Score = 83.2 bits (204), Expect = 8e-16
Identities = 58/194 (29%), Positives = 92/194 (47%), Gaps = 17/194 (8%)
Frame = +3
Query: 171 LPVMGGQNQASDVVIVSSKYKQRYECRLPAGAIHFQREREEEAPAYQGPGIPELLSPM-K 347
LP G + + VI+++ +K++Y+C LP EEE Y+GP ELL P+ K
Sbjct: 70 LPTTGVLYKEDNYVIMTTTHKEKYKCILPL----VTSGDEEEEKDYKGPNPRELLEPLFK 125
Query: 348 DAPCLLKTKDWWTYEFCYGRHIQQYHME---DSEIKGEVLYLGYYQSAFDWDDETAKASK 518
+ C + + +WTYE C+G+HI+QYH E ++ YLG + ++ +A +
Sbjct: 126 QSSCSYRIESYWTYEVCHGKHIRQYHEEKESGQKVNIHEYYLGNMLAKNLLSEKDQEADE 185
Query: 519 QHRLKR------------YHSQTYGNGSKCDL-NGRPREAEVRFLCDEGAGISGDYIDRV 659
+ + K Y+ GNG+ C L RPR + V ++C S I V
Sbjct: 186 KEKSKEIPTKNIEGQMTPYYPVGMGNGTPCSLKQNRPRSSTVMYICHPE---SKHEILSV 242
Query: 660 DEPLSCSYVLTIRT 701
E +C Y + I T
Sbjct: 243 AEVTTCEYEVVILT 256
Score = 67.4 bits (163), Expect = 5e-11
Identities = 37/120 (30%), Positives = 56/120 (46%), Gaps = 12/120 (10%)
Frame = +3
Query: 378 WWTYEFCYGRHIQQYHMEDSEIKGEVLYLGYYQSAFDWDDETAKASKQHRLKRYH----- 542
WW YEFCYG+H+ QYH + K V+ + Q +E +K++ + YH
Sbjct: 367 WWKYEFCYGKHVHQYHEDKDSGKTSVVVGTWNQ------EEHIAWAKKNPARAYHLQDDG 420
Query: 543 -------SQTYGNGSKCDLNGRPREAEVRFLCDEGAGISGDYIDRVDEPLSCSYVLTIRT 701
S YGNG CD+ +PR+ V+ C E + + EP SC Y+L + +
Sbjct: 421 TQTVRMVSHFYGNGDICDITDKPRQVTVKLKCKESDSPHAVTVYML-EPHSCQYILGVES 479
>ref|XP_865097.1| PREDICTED: similar to chromosome 2 open reading frame 30 isoform 5
[Canis familiaris].
Length = 505
Score = 82.8 bits (203), Expect = 1e-15
Identities = 60/197 (30%), Positives = 94/197 (47%), Gaps = 20/197 (10%)
Frame = +3
Query: 171 LPVMGGQNQASDVVIVSSKYKQRYECRLPAGAIHFQREREEEAPAYQGPGIPELLSPM-K 347
LP G + + VI+++ +K++Y+C LP EEE Y+GP ELL P+ K
Sbjct: 70 LPTTGVLYKEDNYVIMTTTHKEKYKCILPL----VTSGDEEEEKDYKGPNPRELLEPLFK 125
Query: 348 DAPCLLKTKDWWTYEFCYGRHIQQYHMEDSEIKGEVLYLGYY------QSAFDWDDETAK 509
+ C + + +WTYE C+G+HI+QYH E+ E +V YY ++ DE K
Sbjct: 126 QSSCSYRIESYWTYEVCHGKHIRQYH-EEKESGQKVNIHEYYLGNMLAKNLLSEKDEKEK 184
Query: 510 ASK------------QHRLKRYHSQTYGNGSKCDL-NGRPREAEVRFLCDEGAGISGDYI 650
+ + + ++ Y+ GNG+ C L RPR + V ++C S I
Sbjct: 185 SKEASDNISIPTKNIEGQMTPYYPVGMGNGTPCSLKQNRPRSSTVMYICHPE---SKHEI 241
Query: 651 DRVDEPLSCSYVLTIRT 701
V E +C Y + I T
Sbjct: 242 LSVAEVTTCEYEVVILT 258
Score = 67.4 bits (163), Expect = 5e-11
Identities = 37/120 (30%), Positives = 56/120 (46%), Gaps = 12/120 (10%)
Frame = +3
Query: 378 WWTYEFCYGRHIQQYHMEDSEIKGEVLYLGYYQSAFDWDDETAKASKQHRLKRYH----- 542
WW YEFCYG+H+ QYH + K V+ + Q +E +K++ + YH
Sbjct: 373 WWKYEFCYGKHVHQYHEDKDSGKTSVVVGTWNQ------EEHIAWAKKNPARAYHLQDDG 426
Query: 543 -------SQTYGNGSKCDLNGRPREAEVRFLCDEGAGISGDYIDRVDEPLSCSYVLTIRT 701
S YGNG CD+ +PR+ V+ C E + + EP SC Y+L + +
Sbjct: 427 TQTVRMVSHFYGNGDICDITDKPRQVTVKLKCKESDSPHAVTVYML-EPHSCQYILGVES 485
>ref|XP_865081.1| PREDICTED: similar to chromosome 2 open reading frame 30 isoform 4
[Canis familiaris].
Length = 501
Score = 81.6 bits (200), Expect = 2e-15
Identities = 60/201 (29%), Positives = 94/201 (46%), Gaps = 24/201 (11%)
Frame = +3
Query: 171 LPVMGGQNQASDVVIVSSKYKQRYECRLPAGAIHFQREREEEAPAYQGPGIPELLSPM-K 347
LP G + + VI+++ +K++Y+C LP EEE Y+GP ELL P+ K
Sbjct: 70 LPTTGVLYKEDNYVIMTTTHKEKYKCILPL----VTSGDEEEEKDYKGPNPRELLEPLFK 125
Query: 348 DAPCLLKTKDWWTYEFCYGRHIQQYHMEDSEIKGEVLYLGYY------------QSAFDW 491
+ C + + +WTYE C+G+HI+QYH E+ E +V YY + F
Sbjct: 126 QSSCSYRIESYWTYEVCHGKHIRQYH-EEKESGQKVNIHEYYLGNMLAKNLLSEKGLFQN 184
Query: 492 DDETAKASKQH----------RLKRYHSQTYGNGSKCDL-NGRPREAEVRFLCDEGAGIS 638
+ E +K + + ++ Y+ GNG+ C L RPR + V ++C S
Sbjct: 185 EKEKSKEASDNISIPTKNIEGQMTPYYPVGMGNGTPCSLKQNRPRSSTVMYICHPE---S 241
Query: 639 GDYIDRVDEPLSCSYVLTIRT 701
I V E +C Y + I T
Sbjct: 242 KHEILSVAEVTTCEYEVVILT 262
Score = 67.4 bits (163), Expect = 5e-11
Identities = 37/120 (30%), Positives = 56/120 (46%), Gaps = 12/120 (10%)
Frame = +3
Query: 378 WWTYEFCYGRHIQQYHMEDSEIKGEVLYLGYYQSAFDWDDETAKASKQHRLKRYH----- 542
WW YEFCYG+H+ QYH + K V+ + Q +E +K++ + YH
Sbjct: 369 WWKYEFCYGKHVHQYHEDKDSGKTSVVVGTWNQ------EEHIAWAKKNPARAYHLQDDG 422
Query: 543 -------SQTYGNGSKCDLNGRPREAEVRFLCDEGAGISGDYIDRVDEPLSCSYVLTIRT 701
S YGNG CD+ +PR+ V+ C E + + EP SC Y+L + +
Sbjct: 423 TQTVRMVSHFYGNGDICDITDKPRQVTVKLKCKESDSPHAVTVYML-EPHSCQYILGVES 481
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 76,688,303
Number of extensions: 2147409
Number of successful extensions: 8829
Number of sequences better than 1.0e-05: 9
Number of HSP's gapped: 8766
Number of HSP's successfully gapped: 14
Length of query: 644
Length of database: 18,874,504
Length adjustment: 109
Effective length of query: 535
Effective length of database: 15,240,880
Effective search space: 8153870800
Effective search space used: 8153870800
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002502
(1932 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_006803.1| protein OS-9 isoform 1 precursor [Homo sapiens]. 842 0.0
Alignment gi|NP_001017958.1| protein OS-9 isoform 4 precursor [Homo sapie... 804 0.0
Alignment gi|NP_001017956.1| protein OS-9 isoform 2 precursor [Homo sapie... 785 0.0
Alignment gi|NP_001017957.1| protein OS-9 isoform 3 precursor [Homo sapie... 747 0.0
Alignment gi|NP_001120870.1| endoplasmic reticulum lectin 1 isoform 3 pre... 84 6e-16
Alignment gi|NP_001120869.1| endoplasmic reticulum lectin 1 isoform 2 pre... 84 6e-16
Alignment gi|NP_056516.2| endoplasmic reticulum lectin 1 isoform 1 precur... 84 6e-16
>ref|NP_006803.1| protein OS-9 isoform 1 precursor [Homo sapiens].
Length = 667
Score = 842 bits (2175), Expect = 0.0
Identities = 433/599 (72%), Positives = 465/599 (77%), Gaps = 2/599 (0%)
Frame = +3
Query: 30 MAAETXXXXXXXXXXXXXXXPANLTGGVGSLNLEELSEMRYGIEILPLPVMGGQNQASDV 209
MAAET PA+LTGGVGSLNLEELSEMRYGIEILPLPVMGGQ+Q+SDV
Sbjct: 1 MAAETLLSSLLGLLLLGLLLPASLTGGVGSLNLEELSEMRYGIEILPLPVMGGQSQSSDV 60
Query: 210 VIVSSKYKQRYECRLPAGAIHFQREREEEAPAYQGPGIPELLSPMKDAPCLLKTKDWWTY 389
VIVSSKYKQRYECRLPAGAIHFQREREEE PAYQGPGIPELLSPM+DAPCLLKTKDWWTY
Sbjct: 61 VIVSSKYKQRYECRLPAGAIHFQREREEETPAYQGPGIPELLSPMRDAPCLLKTKDWWTY 120
Query: 390 EFCYGRHIQQYHMEDSEIKGEVLYLGYYQSAFDWDDETAKASKQHRLKRYHSQTYGNGSK 569
EFCYGRHIQQYHMEDSEIKGEVLYLGYYQSAFDWDDETAKASKQHRLKRYHSQTYGNGSK
Sbjct: 121 EFCYGRHIQQYHMEDSEIKGEVLYLGYYQSAFDWDDETAKASKQHRLKRYHSQTYGNGSK 180
Query: 570 CDLNGRPREAEVRFLCDEGAGISGDYIDRVDEPLSCSYVLTIRTSRXXXXXXXXXXXXXX 749
CDLNGRPREAEVRFLCDEGAGISGDYIDRVDEPLSCSYVLTIRT R
Sbjct: 181 CDLNGRPREAEVRFLCDEGAGISGDYIDRVDEPLSCSYVLTIRTPRLCPHPLLRPPPSAA 240
Query: 750 XQAILCHPALQPEEYMAYIQRQADSEQNGDTARDGLQDLDPPTWSETKPGVGPTKKTGAS 929
QAILCHP+LQPEEYMAY+QRQADS+Q GD + LQDL P WSETK GV P K GAS
Sbjct: 241 PQAILCHPSLQPEEYMAYVQRQADSKQYGDKIIEELQDLGPQVWSETKSGVAPQKMAGAS 300
Query: 930 PAKEDSKESDFWKMLHXXXXXXXXXXXXXXXXXXXXXXXXDPVPGSPDDFQNNVQVKVIR 1109
P K+DSK+SDFWKML+ D G+P+DFQNNVQVKVIR
Sbjct: 301 PTKDDSKDSDFWKMLNEPEDQAPGGEEVPAEEQDPSPEAADSASGAPNDFQNNVQVKVIR 360
Query: 1110 SPADLIQLIEELKGGTRKGKPDAGQEQPADGATEAPPREPEVKEKSDPEHQNEV--XXXX 1283
SPADLI+ IEELKGGT+KGKP+ GQEQP D A E P REPE KE+ DPE Q E+
Sbjct: 361 SPADLIRFIEELKGGTKKGKPNIGQEQPVDDAAEVPQREPE-KERGDPERQREMEEEEDE 419
Query: 1284 XXXXXXXXXXRQLLGEFEKELEGILLPSDRDRLRAEVKAGMERELENIIQETEKELDPDG 1463
RQLLGEFEKELEGILLPSDRDRLR+EVKAGMERELENIIQETEKELDPDG
Sbjct: 420 DEDEDEDEDERQLLGEFEKELEGILLPSDRDRLRSEVKAGMERELENIIQETEKELDPDG 479
Query: 1464 LKKESERDRAILALTSTLDKLIKRLEEKQNPELLKKHRKRRVIXXXXXXXXXXXXXXXXH 1643
LKKESERDRA+LALTSTL+KLIKRLEEKQ+PEL+KKH+K+RV+ H
Sbjct: 480 LKKESERDRAMLALTSTLNKLIKRLEEKQSPELVKKHKKKRVVPKKPPPSPQPTEEDPEH 539
Query: 1644 RVQVRIIKLRHGGPNRDLTVLQMKPETHS*NKSRGWGKNCWEREGPPAEGKIEIKIVQP 1820
RV+VR+ KLR GGPN+DLTVL+MK E + G K EREG A GKIEIKIV+P
Sbjct: 540 RVRVRVTKLRLGGPNQDLTVLEMKRENPQLKQIEGLVKELLEREGLTAAGKIEIKIVRP 598
>ref|NP_001017958.1| protein OS-9 isoform 4 precursor [Homo sapiens].
Length = 652
Score = 804 bits (2077), Expect = 0.0
Identities = 418/599 (69%), Positives = 450/599 (75%), Gaps = 2/599 (0%)
Frame = +3
Query: 30 MAAETXXXXXXXXXXXXXXXPANLTGGVGSLNLEELSEMRYGIEILPLPVMGGQNQASDV 209
MAAET PA+LTGGVGSLNLEELSEMRYGIEILPLPVMGGQ+Q+SDV
Sbjct: 1 MAAETLLSSLLGLLLLGLLLPASLTGGVGSLNLEELSEMRYGIEILPLPVMGGQSQSSDV 60
Query: 210 VIVSSKYKQRYECRLPAGAIHFQREREEEAPAYQGPGIPELLSPMKDAPCLLKTKDWWTY 389
VIVSSKYKQRYECRLPAGAIHFQREREEE PAYQGPGIPELLSPM+DAPCLLKTKDWWTY
Sbjct: 61 VIVSSKYKQRYECRLPAGAIHFQREREEETPAYQGPGIPELLSPMRDAPCLLKTKDWWTY 120
Query: 390 EFCYGRHIQQYHMEDSEIKGEVLYLGYYQSAFDWDDETAKASKQHRLKRYHSQTYGNGSK 569
EFCYGRHIQQYHMEDSEIKGEVLYLGYYQSAFDWDDETAKASKQHRLKRYHSQTYGNGSK
Sbjct: 121 EFCYGRHIQQYHMEDSEIKGEVLYLGYYQSAFDWDDETAKASKQHRLKRYHSQTYGNGSK 180
Query: 570 CDLNGRPREAEVRFLCDEGAGISGDYIDRVDEPLSCSYVLTIRTSRXXXXXXXXXXXXXX 749
CDLNGRPREAEVRFLCDEGAGISGDYIDRVDEPLSCSYVLTIRT R
Sbjct: 181 CDLNGRPREAEVRFLCDEGAGISGDYIDRVDEPLSCSYVLTIRTPRLCPHPLLRPPPSAA 240
Query: 750 XQAILCHPALQPEEYMAYIQRQADSEQNGDTARDGLQDLDPPTWSETKPGVGPTKKTGAS 929
QAILCHP+LQPEEYMAY+QRQADS+Q GD + LQDL P WSETK GV P K GAS
Sbjct: 241 PQAILCHPSLQPEEYMAYVQRQADSKQYGDKIIEELQDLGPQVWSETKSGVAPQKMAGAS 300
Query: 930 PAKEDSKESDFWKMLHXXXXXXXXXXXXXXXXXXXXXXXXDPVPGSPDDFQNNVQVKVIR 1109
P K+DSK+SDFWKML+ D G+P+DFQNNVQVKVIR
Sbjct: 301 PTKDDSKDSDFWKMLNEPEDQAPGGEEVPAEEQDPSPEAADSASGAPNDFQNNVQVKVIR 360
Query: 1110 SPADLIQLIEELKGGTRKGKPDAGQEQPADGATEAPPREPEVKEKSDPEHQNEV--XXXX 1283
SPADLI+ IEELKGGT+KGKP+ GQEQP D A E P REPE KE+ DPE Q E+
Sbjct: 361 SPADLIRFIEELKGGTKKGKPNIGQEQPVDDAAEVPQREPE-KERGDPERQREMEEEEDE 419
Query: 1284 XXXXXXXXXXRQLLGEFEKELEGILLPSDRDRLRAEVKAGMERELENIIQETEKELDPDG 1463
RQLLGEFEKELEGILLPSDRDRLR+ ETEKELDPDG
Sbjct: 420 DEDEDEDEDERQLLGEFEKELEGILLPSDRDRLRS---------------ETEKELDPDG 464
Query: 1464 LKKESERDRAILALTSTLDKLIKRLEEKQNPELLKKHRKRRVIXXXXXXXXXXXXXXXXH 1643
LKKESERDRA+LALTSTL+KLIKRLEEKQ+PEL+KKH+K+RV+ H
Sbjct: 465 LKKESERDRAMLALTSTLNKLIKRLEEKQSPELVKKHKKKRVVPKKPPPSPQPTEEDPEH 524
Query: 1644 RVQVRIIKLRHGGPNRDLTVLQMKPETHS*NKSRGWGKNCWEREGPPAEGKIEIKIVQP 1820
RV+VR+ KLR GGPN+DLTVL+MK E + G K EREG A GKIEIKIV+P
Sbjct: 525 RVRVRVTKLRLGGPNQDLTVLEMKRENPQLKQIEGLVKELLEREGLTAAGKIEIKIVRP 583
>ref|NP_001017956.1| protein OS-9 isoform 2 precursor [Homo sapiens].
Length = 612
Score = 785 bits (2026), Expect = 0.0
Identities = 397/523 (75%), Positives = 423/523 (80%), Gaps = 2/523 (0%)
Frame = +3
Query: 30 MAAETXXXXXXXXXXXXXXXPANLTGGVGSLNLEELSEMRYGIEILPLPVMGGQNQASDV 209
MAAET PA+LTGGVGSLNLEELSEMRYGIEILPLPVMGGQ+Q+SDV
Sbjct: 1 MAAETLLSSLLGLLLLGLLLPASLTGGVGSLNLEELSEMRYGIEILPLPVMGGQSQSSDV 60
Query: 210 VIVSSKYKQRYECRLPAGAIHFQREREEEAPAYQGPGIPELLSPMKDAPCLLKTKDWWTY 389
VIVSSKYKQRYECRLPAGAIHFQREREEE PAYQGPGIPELLSPM+DAPCLLKTKDWWTY
Sbjct: 61 VIVSSKYKQRYECRLPAGAIHFQREREEETPAYQGPGIPELLSPMRDAPCLLKTKDWWTY 120
Query: 390 EFCYGRHIQQYHMEDSEIKGEVLYLGYYQSAFDWDDETAKASKQHRLKRYHSQTYGNGSK 569
EFCYGRHIQQYHMEDSEIKGEVLYLGYYQSAFDWDDETAKASKQHRLKRYHSQTYGNGSK
Sbjct: 121 EFCYGRHIQQYHMEDSEIKGEVLYLGYYQSAFDWDDETAKASKQHRLKRYHSQTYGNGSK 180
Query: 570 CDLNGRPREAEVRFLCDEGAGISGDYIDRVDEPLSCSYVLTIRTSRXXXXXXXXXXXXXX 749
CDLNGRPREAEVRFLCDEGAGISGDYIDRVDEPLSCSYVLTIRT R
Sbjct: 181 CDLNGRPREAEVRFLCDEGAGISGDYIDRVDEPLSCSYVLTIRTPRLCPHPLLRPPPSAA 240
Query: 750 XQAILCHPALQPEEYMAYIQRQADSEQNGDTARDGLQDLDPPTWSETKPGVGPTKKTGAS 929
QAILCHP+LQPEEYMAY+QRQADS+Q GD + LQDL P WSETK GV P K GAS
Sbjct: 241 PQAILCHPSLQPEEYMAYVQRQADSKQYGDKIIEELQDLGPQVWSETKSGVAPQKMAGAS 300
Query: 930 PAKEDSKESDFWKMLHXXXXXXXXXXXXXXXXXXXXXXXXDPVPGSPDDFQNNVQVKVIR 1109
P K+DSK+SDFWKML+ D G+P+DFQNNVQVKVIR
Sbjct: 301 PTKDDSKDSDFWKMLNEPEDQAPGGEEVPAEEQDPSPEAADSASGAPNDFQNNVQVKVIR 360
Query: 1110 SPADLIQLIEELKGGTRKGKPDAGQEQPADGATEAPPREPEVKEKSDPEHQNEV--XXXX 1283
SPADLI+ IEELKGGT+KGKP+ GQEQP D A E P REPE KE+ DPE Q E+
Sbjct: 361 SPADLIRFIEELKGGTKKGKPNIGQEQPVDDAAEVPQREPE-KERGDPERQREMEEEEDE 419
Query: 1284 XXXXXXXXXXRQLLGEFEKELEGILLPSDRDRLRAEVKAGMERELENIIQETEKELDPDG 1463
RQLLGEFEKELEGILLPSDRDRLR+EVKAGMERELENIIQETEKELDPDG
Sbjct: 420 DEDEDEDEDERQLLGEFEKELEGILLPSDRDRLRSEVKAGMERELENIIQETEKELDPDG 479
Query: 1464 LKKESERDRAILALTSTLDKLIKRLEEKQNPELLKKHRKRRVI 1592
LKKESERDRA+LALTSTL+KLIKRLEEKQ+PEL+KKH+K+RV+
Sbjct: 480 LKKESERDRAMLALTSTLNKLIKRLEEKQSPELVKKHKKKRVV 522
>ref|NP_001017957.1| protein OS-9 isoform 3 precursor [Homo sapiens].
Length = 597
Score = 747 bits (1928), Expect = 0.0
Identities = 382/523 (73%), Positives = 408/523 (78%), Gaps = 2/523 (0%)
Frame = +3
Query: 30 MAAETXXXXXXXXXXXXXXXPANLTGGVGSLNLEELSEMRYGIEILPLPVMGGQNQASDV 209
MAAET PA+LTGGVGSLNLEELSEMRYGIEILPLPVMGGQ+Q+SDV
Sbjct: 1 MAAETLLSSLLGLLLLGLLLPASLTGGVGSLNLEELSEMRYGIEILPLPVMGGQSQSSDV 60
Query: 210 VIVSSKYKQRYECRLPAGAIHFQREREEEAPAYQGPGIPELLSPMKDAPCLLKTKDWWTY 389
VIVSSKYKQRYECRLPAGAIHFQREREEE PAYQGPGIPELLSPM+DAPCLLKTKDWWTY
Sbjct: 61 VIVSSKYKQRYECRLPAGAIHFQREREEETPAYQGPGIPELLSPMRDAPCLLKTKDWWTY 120
Query: 390 EFCYGRHIQQYHMEDSEIKGEVLYLGYYQSAFDWDDETAKASKQHRLKRYHSQTYGNGSK 569
EFCYGRHIQQYHMEDSEIKGEVLYLGYYQSAFDWDDETAKASKQHRLKRYHSQTYGNGSK
Sbjct: 121 EFCYGRHIQQYHMEDSEIKGEVLYLGYYQSAFDWDDETAKASKQHRLKRYHSQTYGNGSK 180
Query: 570 CDLNGRPREAEVRFLCDEGAGISGDYIDRVDEPLSCSYVLTIRTSRXXXXXXXXXXXXXX 749
CDLNGRPREAEVRFLCDEGAGISGDYIDRVDEPLSCSYVLTIRT R
Sbjct: 181 CDLNGRPREAEVRFLCDEGAGISGDYIDRVDEPLSCSYVLTIRTPRLCPHPLLRPPPSAA 240
Query: 750 XQAILCHPALQPEEYMAYIQRQADSEQNGDTARDGLQDLDPPTWSETKPGVGPTKKTGAS 929
QAILCHP+LQPEEYMAY+QRQADS+Q GD + LQDL P WSETK GV P K GAS
Sbjct: 241 PQAILCHPSLQPEEYMAYVQRQADSKQYGDKIIEELQDLGPQVWSETKSGVAPQKMAGAS 300
Query: 930 PAKEDSKESDFWKMLHXXXXXXXXXXXXXXXXXXXXXXXXDPVPGSPDDFQNNVQVKVIR 1109
P K+DSK+SDFWKML+ D G+P+DFQNNVQVKVIR
Sbjct: 301 PTKDDSKDSDFWKMLNEPEDQAPGGEEVPAEEQDPSPEAADSASGAPNDFQNNVQVKVIR 360
Query: 1110 SPADLIQLIEELKGGTRKGKPDAGQEQPADGATEAPPREPEVKEKSDPEHQNEV--XXXX 1283
SPADLI+ IEELKGGT+KGKP+ GQEQP D A E P REPE KE+ DPE Q E+
Sbjct: 361 SPADLIRFIEELKGGTKKGKPNIGQEQPVDDAAEVPQREPE-KERGDPERQREMEEEEDE 419
Query: 1284 XXXXXXXXXXRQLLGEFEKELEGILLPSDRDRLRAEVKAGMERELENIIQETEKELDPDG 1463
RQLLGEFEKELEGILLPSDRDRLR+ ETEKELDPDG
Sbjct: 420 DEDEDEDEDERQLLGEFEKELEGILLPSDRDRLRS---------------ETEKELDPDG 464
Query: 1464 LKKESERDRAILALTSTLDKLIKRLEEKQNPELLKKHRKRRVI 1592
LKKESERDRA+LALTSTL+KLIKRLEEKQ+PEL+KKH+K+RV+
Sbjct: 465 LKKESERDRAMLALTSTLNKLIKRLEEKQSPELVKKHKKKRVV 507
>ref|NP_001120870.1| endoplasmic reticulum lectin 1 isoform 3 precursor [Homo sapiens].
Length = 429
Score = 83.6 bits (205), Expect = 6e-16
Identities = 60/194 (30%), Positives = 93/194 (47%), Gaps = 17/194 (8%)
Frame = +3
Query: 171 LPVMGGQNQASDVVIVSSKYKQRYECRLPAGAIHFQREREEEAPAYQGPGIPELLSPM-K 347
LP G + + VI+++ +K++Y+C LP EEE Y+GP ELL P+ K
Sbjct: 54 LPTTGVLYKEDNYVIMTTAHKEKYKCILPL----VTSGDEEEEKDYKGPNPRELLEPLFK 109
Query: 348 DAPCLLKTKDWWTYEFCYGRHIQQYHME---DSEIKGEVLYLGYYQS---AFDWDDETAK 509
+ C + + +WTYE C+G+HI+QYH E +I YLG + F+ + E +
Sbjct: 110 QSSCSYRIESYWTYEVCHGKHIRQYHEEKETGQKINIHEYYLGNMLAKNLLFEKEREAEE 169
Query: 510 ASKQH---------RLKRYHSQTYGNGSKCDL-NGRPREAEVRFLCDEGAGISGDYIDRV 659
K + ++ Y+ GNG+ C L RPR + V ++C S I V
Sbjct: 170 KEKSNEIPTKNIEGQMTPYYPVGMGNGTPCSLKQNRPRSSTVMYICHPE---SKHEILSV 226
Query: 660 DEPLSCSYVLTIRT 701
E +C Y + I T
Sbjct: 227 AEVTTCEYEVVILT 240
Score = 68.6 bits (166), Expect = 2e-11
Identities = 37/120 (30%), Positives = 57/120 (47%), Gaps = 12/120 (10%)
Frame = +3
Query: 378 WWTYEFCYGRHIQQYHMEDSEIKGEVLYLGYYQSAFDWDDETAKASKQHRLKRYH----- 542
WW YEFCYG+H+ QYH + K V+ + Q +E + +K++ + YH
Sbjct: 297 WWKYEFCYGKHVHQYHEDKDSGKTSVVVGTWNQ------EEHIEWAKKNTARAYHLQDDG 350
Query: 543 -------SQTYGNGSKCDLNGRPREAEVRFLCDEGAGISGDYIDRVDEPLSCSYVLTIRT 701
S YGNG CD+ +PR+ V+ C E + + EP SC Y+L + +
Sbjct: 351 TQTVRMVSHFYGNGDICDITDKPRQVTVKLKCKESDSPHAVTVYML-EPHSCQYILGVES 409
>ref|NP_001120869.1| endoplasmic reticulum lectin 1 isoform 2 precursor [Homo sapiens].
Length = 457
Score = 83.6 bits (205), Expect = 6e-16
Identities = 60/194 (30%), Positives = 93/194 (47%), Gaps = 17/194 (8%)
Frame = +3
Query: 171 LPVMGGQNQASDVVIVSSKYKQRYECRLPAGAIHFQREREEEAPAYQGPGIPELLSPM-K 347
LP G + + VI+++ +K++Y+C LP EEE Y+GP ELL P+ K
Sbjct: 54 LPTTGVLYKEDNYVIMTTAHKEKYKCILPL----VTSGDEEEEKDYKGPNPRELLEPLFK 109
Query: 348 DAPCLLKTKDWWTYEFCYGRHIQQYHME---DSEIKGEVLYLGYYQS---AFDWDDETAK 509
+ C + + +WTYE C+G+HI+QYH E +I YLG + F+ + E +
Sbjct: 110 QSSCSYRIESYWTYEVCHGKHIRQYHEEKETGQKINIHEYYLGNMLAKNLLFEKEREAEE 169
Query: 510 ASKQH---------RLKRYHSQTYGNGSKCDL-NGRPREAEVRFLCDEGAGISGDYIDRV 659
K + ++ Y+ GNG+ C L RPR + V ++C S I V
Sbjct: 170 KEKSNEIPTKNIEGQMTPYYPVGMGNGTPCSLKQNRPRSSTVMYICHPE---SKHEILSV 226
Query: 660 DEPLSCSYVLTIRT 701
E +C Y + I T
Sbjct: 227 AEVTTCEYEVVILT 240
Score = 51.6 bits (122), Expect = 3e-06
Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 1/109 (0%)
Frame = +3
Query: 378 WWTYEFCYGRHIQQYHMEDSEIKGEVLYLGYYQSAFDWDDETAKASKQHRLKRYHSQTYG 557
WW YEFCYG+H+ QYH + K V+ + Q +E + +K++ + YH Q G
Sbjct: 351 WWKYEFCYGKHVHQYHEDKDSGKTSVVVGTWNQ------EEHIEWAKKNTARAYHLQDDG 404
Query: 558 NGS-KCDLNGRPREAEVRFLCDEGAGISGDYIDRVDEPLSCSYVLTIRT 701
+ +C + P V L EP SC Y+L + +
Sbjct: 405 TQTVRCKESDSPHAVTVYML----------------EPHSCQYILGVES 437
>ref|NP_056516.2| endoplasmic reticulum lectin 1 isoform 1 precursor [Homo sapiens].
Length = 483
Score = 83.6 bits (205), Expect = 6e-16
Identities = 60/194 (30%), Positives = 93/194 (47%), Gaps = 17/194 (8%)
Frame = +3
Query: 171 LPVMGGQNQASDVVIVSSKYKQRYECRLPAGAIHFQREREEEAPAYQGPGIPELLSPM-K 347
LP G + + VI+++ +K++Y+C LP EEE Y+GP ELL P+ K
Sbjct: 54 LPTTGVLYKEDNYVIMTTAHKEKYKCILPL----VTSGDEEEEKDYKGPNPRELLEPLFK 109
Query: 348 DAPCLLKTKDWWTYEFCYGRHIQQYHME---DSEIKGEVLYLGYYQS---AFDWDDETAK 509
+ C + + +WTYE C+G+HI+QYH E +I YLG + F+ + E +
Sbjct: 110 QSSCSYRIESYWTYEVCHGKHIRQYHEEKETGQKINIHEYYLGNMLAKNLLFEKEREAEE 169
Query: 510 ASKQH---------RLKRYHSQTYGNGSKCDL-NGRPREAEVRFLCDEGAGISGDYIDRV 659
K + ++ Y+ GNG+ C L RPR + V ++C S I V
Sbjct: 170 KEKSNEIPTKNIEGQMTPYYPVGMGNGTPCSLKQNRPRSSTVMYICHPE---SKHEILSV 226
Query: 660 DEPLSCSYVLTIRT 701
E +C Y + I T
Sbjct: 227 AEVTTCEYEVVILT 240
Score = 68.6 bits (166), Expect = 2e-11
Identities = 37/120 (30%), Positives = 57/120 (47%), Gaps = 12/120 (10%)
Frame = +3
Query: 378 WWTYEFCYGRHIQQYHMEDSEIKGEVLYLGYYQSAFDWDDETAKASKQHRLKRYH----- 542
WW YEFCYG+H+ QYH + K V+ + Q +E + +K++ + YH
Sbjct: 351 WWKYEFCYGKHVHQYHEDKDSGKTSVVVGTWNQ------EEHIEWAKKNTARAYHLQDDG 404
Query: 543 -------SQTYGNGSKCDLNGRPREAEVRFLCDEGAGISGDYIDRVDEPLSCSYVLTIRT 701
S YGNG CD+ +PR+ V+ C E + + EP SC Y+L + +
Sbjct: 405 TQTVRMVSHFYGNGDICDITDKPRQVTVKLKCKESDSPHAVTVYML-EPHSCQYILGVES 463
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 75,040,664
Number of extensions: 2090442
Number of successful extensions: 8487
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 8413
Number of HSP's successfully gapped: 10
Length of query: 644
Length of database: 18,297,164
Length adjustment: 109
Effective length of query: 535
Effective length of database: 14,704,088
Effective search space: 7866687080
Effective search space used: 7866687080
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002502
(1932 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001164497.1| protein OS-9 isoform 1 precursor [Mus muscul... 761 0.0
Alignment gi|NP_808282.2| protein OS-9 isoform 2 precursor [Mus musculus]. 702 0.0
Alignment gi|NP_080021.3| endoplasmic reticulum lectin 1 precursor [Mus m... 82 2e-15
>ref|NP_001164497.1| protein OS-9 isoform 1 precursor [Mus musculus].
Length = 672
Score = 761 bits (1966), Expect = 0.0
Identities = 397/611 (64%), Positives = 448/611 (73%), Gaps = 13/611 (2%)
Frame = +3
Query: 30 MAAETXXXXXXXXXXXXXXXPANLTGGVGSLNLEELSEMRYGIEILPLPVMGGQNQASDV 209
MAAE PA LTGGVGSLNLEELSEMRYGI+ILPLPVMGGQ+QASDV
Sbjct: 1 MAAEVLLSSLLGLLFLGLLLPARLTGGVGSLNLEELSEMRYGIQILPLPVMGGQSQASDV 60
Query: 210 VIVSSKYKQRYECRLPAGAIHFQREREEEAPAYQGPGIPELLSPMKDAPCLLKTKDWWTY 389
V+VSSKYKQRYECRLPAGAIHFQREREEE PAYQGPGIPELLSPM+DAPCLLKTKDWWTY
Sbjct: 61 VVVSSKYKQRYECRLPAGAIHFQREREEETPAYQGPGIPELLSPMRDAPCLLKTKDWWTY 120
Query: 390 EFCYGRHIQQYHMEDSEIKGEVLYLGYYQSAFDWDDETAKASKQHRLKRYHSQTYGNGSK 569
EFCYGRHIQQYHMEDSEIKG+VLYLG+YQS+F+WDDETAKASKQHRLKRYHSQTYGNGSK
Sbjct: 121 EFCYGRHIQQYHMEDSEIKGDVLYLGHYQSSFNWDDETAKASKQHRLKRYHSQTYGNGSK 180
Query: 570 CDLNGRPREAEVRFLCDEGAGISGDYIDRVDEPLSCSYVLTIRTSRXXXXXXXXXXXXXX 749
CDLNG+PREAEVRFLCDEGAGISGDYIDRVDEP+SCSYVLTIRTSR
Sbjct: 181 CDLNGKPREAEVRFLCDEGAGISGDYIDRVDEPVSCSYVLTIRTSRLCPHPLLRPPASAA 240
Query: 750 XQAILCHPALQPEEYMAYIQRQADSEQNGDTARDGLQDLDPPTWSETKPGVGPTKKTGAS 929
QAILCHPALQP+EYMAY+QRQA+S+Q+ + + +QD D WS +K P KK S
Sbjct: 241 PQAILCHPALQPDEYMAYLQRQAESKQHEEKTTEEVQDTDRQVWSGSKAAGAPPKKEDVS 300
Query: 930 PAKEDSKESDFWKMLHXXXXXXXXXXXXXXXXXXXXXXXXDPVPGSPDDFQNNVQVKVIR 1109
PAKE+ KES+ WK+ DP P P+DFQNNVQVK+IR
Sbjct: 301 PAKEE-KESELWKLQGPEEQAAAREEAQAGEQDLNHEAAADPAPSPPNDFQNNVQVKLIR 359
Query: 1110 SPADLIQLIEELKGGTRKGKPDAGQEQPADGATEAPPRE-------------PEVKEKSD 1250
SPADLI+LIEELK KGKP +EQP D TEAP RE P + E+ D
Sbjct: 360 SPADLIRLIEELK-AAEKGKPSVRREQPGDDTTEAPQREAEGTKAKGKDGEPPGLMEEED 418
Query: 1251 PEHQNEVXXXXXXXXXXXXXXRQLLGEFEKELEGILLPSDRDRLRAEVKAGMERELENII 1430
+ + E +QLLGEFEKELEG+LLPS+R+RLR+EVKAGMERELENII
Sbjct: 419 GDDEEE-----EEEEEEDEEEQQLLGEFEKELEGMLLPSNRERLRSEVKAGMERELENII 473
Query: 1431 QETEKELDPDGLKKESERDRAILALTSTLDKLIKRLEEKQNPELLKKHRKRRVIXXXXXX 1610
QETEKELDP+GL+KESER++AILALTSTLDKLIKRL+E Q+PEL++K++KRRV+
Sbjct: 474 QETEKELDPEGLRKESEREQAILALTSTLDKLIKRLQENQSPELVQKYKKRRVVPQKPPP 533
Query: 1611 XXXXXXXXXXHRVQVRIIKLRHGGPNRDLTVLQMKPETHS*NKSRGWGKNCWEREGPPAE 1790
HRV+VR+ KLR GGPNRDLTVL+M E + G EREG AE
Sbjct: 534 SPHPTEEEPEHRVRVRVTKLRPGGPNRDLTVLEMNRENPQLKQIEGLVTEVLEREGLTAE 593
Query: 1791 GKIEIKIVQPG 1823
GKIEIKIV+PG
Sbjct: 594 GKIEIKIVRPG 604
>ref|NP_808282.2| protein OS-9 isoform 2 precursor [Mus musculus].
Length = 617
Score = 702 bits (1811), Expect = 0.0
Identities = 360/534 (67%), Positives = 406/534 (76%), Gaps = 13/534 (2%)
Frame = +3
Query: 30 MAAETXXXXXXXXXXXXXXXPANLTGGVGSLNLEELSEMRYGIEILPLPVMGGQNQASDV 209
MAAE PA LTGGVGSLNLEELSEMRYGI+ILPLPVMGGQ+QASDV
Sbjct: 1 MAAEVLLSSLLGLLFLGLLLPARLTGGVGSLNLEELSEMRYGIQILPLPVMGGQSQASDV 60
Query: 210 VIVSSKYKQRYECRLPAGAIHFQREREEEAPAYQGPGIPELLSPMKDAPCLLKTKDWWTY 389
V+VSSKYKQRYECRLPAGAIHFQREREEE PAYQGPGIPELLSPM+DAPCLLKTKDWWTY
Sbjct: 61 VVVSSKYKQRYECRLPAGAIHFQREREEETPAYQGPGIPELLSPMRDAPCLLKTKDWWTY 120
Query: 390 EFCYGRHIQQYHMEDSEIKGEVLYLGYYQSAFDWDDETAKASKQHRLKRYHSQTYGNGSK 569
EFCYGRHIQQYHMEDSEIKG+VLYLG+YQS+F+WDDETAKASKQHRLKRYHSQTYGNGSK
Sbjct: 121 EFCYGRHIQQYHMEDSEIKGDVLYLGHYQSSFNWDDETAKASKQHRLKRYHSQTYGNGSK 180
Query: 570 CDLNGRPREAEVRFLCDEGAGISGDYIDRVDEPLSCSYVLTIRTSRXXXXXXXXXXXXXX 749
CDLNG+PREAEVRFLCDEGAGISGDYIDRVDEP+SCSYVLTIRTSR
Sbjct: 181 CDLNGKPREAEVRFLCDEGAGISGDYIDRVDEPVSCSYVLTIRTSRLCPHPLLRPPASAA 240
Query: 750 XQAILCHPALQPEEYMAYIQRQADSEQNGDTARDGLQDLDPPTWSETKPGVGPTKKTGAS 929
QAILCHPALQP+EYMAY+QRQA+S+Q+ + + +QD D WS +K P KK S
Sbjct: 241 PQAILCHPALQPDEYMAYLQRQAESKQHEEKTTEEVQDTDRQVWSGSKAAGAPPKKEDVS 300
Query: 930 PAKEDSKESDFWKMLHXXXXXXXXXXXXXXXXXXXXXXXXDPVPGSPDDFQNNVQVKVIR 1109
PAKE+ KES+ WK+ DP P P+DFQNNVQVK+IR
Sbjct: 301 PAKEE-KESELWKLQGPEEQAAAREEAQAGEQDLNHEAAADPAPSPPNDFQNNVQVKLIR 359
Query: 1110 SPADLIQLIEELKGGTRKGKPDAGQEQPADGATEAPPRE-------------PEVKEKSD 1250
SPADLI+LIEELK KGKP +EQP D TEAP RE P + E+ D
Sbjct: 360 SPADLIRLIEELK-AAEKGKPSVRREQPGDDTTEAPQREAEGTKAKGKDGEPPGLMEEED 418
Query: 1251 PEHQNEVXXXXXXXXXXXXXXRQLLGEFEKELEGILLPSDRDRLRAEVKAGMERELENII 1430
+ + E +QLLGEFEKELEG+LLPS+R+RLR+EVKAGMERELENII
Sbjct: 419 GDDEEE-----EEEEEEDEEEQQLLGEFEKELEGMLLPSNRERLRSEVKAGMERELENII 473
Query: 1431 QETEKELDPDGLKKESERDRAILALTSTLDKLIKRLEEKQNPELLKKHRKRRVI 1592
QETEKELDP+GL+KESER++AILALTSTLDKLIKRL+E Q+PEL++K++KRRV+
Sbjct: 474 QETEKELDPEGLRKESEREQAILALTSTLDKLIKRLQENQSPELVQKYKKRRVV 527
>ref|NP_080021.3| endoplasmic reticulum lectin 1 precursor [Mus musculus].
Length = 483
Score = 81.6 bits (200), Expect = 2e-15
Identities = 58/195 (29%), Positives = 93/195 (47%), Gaps = 18/195 (9%)
Frame = +3
Query: 171 LPVMGGQNQASDVVIVSSKYKQRYECRLPAGAIHFQREREEEAPAYQGPGIPELLSPM-K 347
LP G + + +I+++ +K++Y+C LP EEE Y+GP ELL P+ K
Sbjct: 54 LPTTGVLYKEDNYIIMTTAHKEKYKCILPL----VTSGDEEEEKDYKGPNPRELLEPLFK 109
Query: 348 DAPCLLKTKDWWTYEFCYGRHIQQYHMEDSEIKGEVLYLGYY-------QSAFDWDDETA 506
+ C + + +WTYE C+G+HI+QYH E+ E +V YY ++ + E
Sbjct: 110 QSSCSYRIESYWTYEVCHGKHIRQYH-EEKETGQKVNIHEYYLGNMLAKNLLYEKEREAK 168
Query: 507 KASKQH---------RLKRYHSQTYGNGSKCDL-NGRPREAEVRFLCDEGAGISGDYIDR 656
+ K + ++ Y+ GNG+ C L RPR + V ++C S I
Sbjct: 169 ENEKSNEIPTKNIEGQMTPYYPVGMGNGTPCSLKQNRPRSSTVMYICHPE---SKHEILS 225
Query: 657 VDEPLSCSYVLTIRT 701
V E +C Y + I T
Sbjct: 226 VAEVTTCEYEVVILT 240
Score = 68.9 bits (167), Expect = 1e-11
Identities = 37/120 (30%), Positives = 57/120 (47%), Gaps = 12/120 (10%)
Frame = +3
Query: 378 WWTYEFCYGRHIQQYHMEDSEIKGEVLYLGYYQSAFDWDDETAKASKQHRLKRYH----- 542
WW YEFCYG+H+ QYH + K V+ + Q +E + +K++ + YH
Sbjct: 351 WWKYEFCYGKHVHQYHEDKDNGKTSVVVGTWNQ------EEHVEWAKKNTARAYHLQDDG 404
Query: 543 -------SQTYGNGSKCDLNGRPREAEVRFLCDEGAGISGDYIDRVDEPLSCSYVLTIRT 701
S YGNG CD+ +PR+ V+ C E + + EP SC Y+L + +
Sbjct: 405 TQTVRMVSHFYGNGDICDITDKPRQVTVKLKCKESDSPHAVTVYML-EPHSCQYILGVES 463
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 63,163,826
Number of extensions: 1738338
Number of successful extensions: 7029
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 6970
Number of HSP's successfully gapped: 4
Length of query: 644
Length of database: 15,617,559
Length adjustment: 108
Effective length of query: 536
Effective length of database: 12,373,671
Effective search space: 6632287656
Effective search space used: 6632287656
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002502
(1932 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_003354874.1| PREDICTED: endoplasmic reticulum lectin 1-li... 84 3e-16
Alignment gi|XP_003125196.1| PREDICTED: endoplasmic reticulum lectin 1-li... 84 3e-16
Alignment gi|XP_003125195.1| PREDICTED: endoplasmic reticulum lectin 1-li... 84 3e-16
>ref|XP_003354874.1| PREDICTED: endoplasmic reticulum lectin 1-like [Sus scrofa].
Length = 457
Score = 84.0 bits (206), Expect = 3e-16
Identities = 58/194 (29%), Positives = 92/194 (47%), Gaps = 17/194 (8%)
Frame = +3
Query: 171 LPVMGGQNQASDVVIVSSKYKQRYECRLPAGAIHFQREREEEAPAYQGPGIPELLSPM-K 347
LP G + + VI+++ +K++Y+C LP EEE Y+GP ELL P+ K
Sbjct: 54 LPTTGVLYKEDNYVIMTTTHKEKYKCILPL----VTSGDEEEEKDYKGPNPRELLEPLFK 109
Query: 348 DAPCLLKTKDWWTYEFCYGRHIQQYHME---DSEIKGEVLYLGYYQSAFDWDDETAKASK 518
+ C + + +WTYE C+G+HI+QYH E ++ YLG + ++ +A +
Sbjct: 110 QSSCSYRIESYWTYEVCHGKHIRQYHEEKESGQKVNIHEYYLGNMMAKNLLSEKEQEAEE 169
Query: 519 QHRLKR------------YHSQTYGNGSKCDL-NGRPREAEVRFLCDEGAGISGDYIDRV 659
+ + K Y+ GNG+ C L RPR + V ++C S I V
Sbjct: 170 KEKSKEIPTKNIEGQMTPYYPVGMGNGTPCSLKQNRPRSSTVMYICHPE---SKHEILSV 226
Query: 660 DEPLSCSYVLTIRT 701
E +C Y + I T
Sbjct: 227 AEVTTCEYEVVILT 240
Score = 51.6 bits (122), Expect = 2e-06
Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 1/109 (0%)
Frame = +3
Query: 378 WWTYEFCYGRHIQQYHMEDSEIKGEVLYLGYYQSAFDWDDETAKASKQHRLKRYHSQTYG 557
WW YEFCYG+H+ QYH + K V+ + Q +E + +K++ + YH Q G
Sbjct: 351 WWKYEFCYGKHVHQYHEDKDSGKTSVVVGTWNQ------EEHIEWAKKNTARAYHLQDDG 404
Query: 558 NGS-KCDLNGRPREAEVRFLCDEGAGISGDYIDRVDEPLSCSYVLTIRT 701
+ +C + P V L EP SC Y+L + +
Sbjct: 405 TQTVRCKESDSPHAVTVYML----------------EPHSCQYILGVES 437
>ref|XP_003125196.1| PREDICTED: endoplasmic reticulum lectin 1-like isoform 2 [Sus
scrofa].
Length = 429
Score = 84.0 bits (206), Expect = 3e-16
Identities = 58/194 (29%), Positives = 92/194 (47%), Gaps = 17/194 (8%)
Frame = +3
Query: 171 LPVMGGQNQASDVVIVSSKYKQRYECRLPAGAIHFQREREEEAPAYQGPGIPELLSPM-K 347
LP G + + VI+++ +K++Y+C LP EEE Y+GP ELL P+ K
Sbjct: 54 LPTTGVLYKEDNYVIMTTTHKEKYKCILPL----VTSGDEEEEKDYKGPNPRELLEPLFK 109
Query: 348 DAPCLLKTKDWWTYEFCYGRHIQQYHME---DSEIKGEVLYLGYYQSAFDWDDETAKASK 518
+ C + + +WTYE C+G+HI+QYH E ++ YLG + ++ +A +
Sbjct: 110 QSSCSYRIESYWTYEVCHGKHIRQYHEEKESGQKVNIHEYYLGNMMAKNLLSEKEQEAEE 169
Query: 519 QHRLKR------------YHSQTYGNGSKCDL-NGRPREAEVRFLCDEGAGISGDYIDRV 659
+ + K Y+ GNG+ C L RPR + V ++C S I V
Sbjct: 170 KEKSKEIPTKNIEGQMTPYYPVGMGNGTPCSLKQNRPRSSTVMYICHPE---SKHEILSV 226
Query: 660 DEPLSCSYVLTIRT 701
E +C Y + I T
Sbjct: 227 AEVTTCEYEVVILT 240
Score = 68.6 bits (166), Expect = 1e-11
Identities = 37/120 (30%), Positives = 57/120 (47%), Gaps = 12/120 (10%)
Frame = +3
Query: 378 WWTYEFCYGRHIQQYHMEDSEIKGEVLYLGYYQSAFDWDDETAKASKQHRLKRYH----- 542
WW YEFCYG+H+ QYH + K V+ + Q +E + +K++ + YH
Sbjct: 297 WWKYEFCYGKHVHQYHEDKDSGKTSVVVGTWNQ------EEHIEWAKKNTARAYHLQDDG 350
Query: 543 -------SQTYGNGSKCDLNGRPREAEVRFLCDEGAGISGDYIDRVDEPLSCSYVLTIRT 701
S YGNG CD+ +PR+ V+ C E + + EP SC Y+L + +
Sbjct: 351 TQTVRMVSHFYGNGDICDITDKPRQVTVKLKCKESDSPHAVTVYML-EPHSCQYILGVES 409
>ref|XP_003125195.1| PREDICTED: endoplasmic reticulum lectin 1-like isoform 1 [Sus
scrofa].
Length = 483
Score = 84.0 bits (206), Expect = 3e-16
Identities = 58/194 (29%), Positives = 92/194 (47%), Gaps = 17/194 (8%)
Frame = +3
Query: 171 LPVMGGQNQASDVVIVSSKYKQRYECRLPAGAIHFQREREEEAPAYQGPGIPELLSPM-K 347
LP G + + VI+++ +K++Y+C LP EEE Y+GP ELL P+ K
Sbjct: 54 LPTTGVLYKEDNYVIMTTTHKEKYKCILPL----VTSGDEEEEKDYKGPNPRELLEPLFK 109
Query: 348 DAPCLLKTKDWWTYEFCYGRHIQQYHME---DSEIKGEVLYLGYYQSAFDWDDETAKASK 518
+ C + + +WTYE C+G+HI+QYH E ++ YLG + ++ +A +
Sbjct: 110 QSSCSYRIESYWTYEVCHGKHIRQYHEEKESGQKVNIHEYYLGNMMAKNLLSEKEQEAEE 169
Query: 519 QHRLKR------------YHSQTYGNGSKCDL-NGRPREAEVRFLCDEGAGISGDYIDRV 659
+ + K Y+ GNG+ C L RPR + V ++C S I V
Sbjct: 170 KEKSKEIPTKNIEGQMTPYYPVGMGNGTPCSLKQNRPRSSTVMYICHPE---SKHEILSV 226
Query: 660 DEPLSCSYVLTIRT 701
E +C Y + I T
Sbjct: 227 AEVTTCEYEVVILT 240
Score = 68.6 bits (166), Expect = 1e-11
Identities = 37/120 (30%), Positives = 57/120 (47%), Gaps = 12/120 (10%)
Frame = +3
Query: 378 WWTYEFCYGRHIQQYHMEDSEIKGEVLYLGYYQSAFDWDDETAKASKQHRLKRYH----- 542
WW YEFCYG+H+ QYH + K V+ + Q +E + +K++ + YH
Sbjct: 351 WWKYEFCYGKHVHQYHEDKDSGKTSVVVGTWNQ------EEHIEWAKKNTARAYHLQDDG 404
Query: 543 -------SQTYGNGSKCDLNGRPREAEVRFLCDEGAGISGDYIDRVDEPLSCSYVLTIRT 701
S YGNG CD+ +PR+ V+ C E + + EP SC Y+L + +
Sbjct: 405 TQTVRMVSHFYGNGDICDITDKPRQVTVKLKCKESDSPHAVTVYML-EPHSCQYILGVES 463
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 47,283,944
Number of extensions: 1337486
Number of successful extensions: 5468
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 5417
Number of HSP's successfully gapped: 6
Length of query: 644
Length of database: 11,343,932
Length adjustment: 105
Effective length of query: 539
Effective length of database: 8,729,747
Effective search space: 4705333633
Effective search space used: 4705333633
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002502
(1932 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
***** No hits found ******
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 56,423,559
Number of extensions: 416
Number of successful extensions: 416
Number of sequences better than 1.0e-05: 0
Number of HSP's gapped: 416
Number of HSP's successfully gapped: 0
Length of query: 1932
Length of database: 2,808,509,378
Length adjustment: 22
Effective length of query: 1910
Effective length of database: 2,808,408,574
Effective search space: 5364060376340
Effective search space used: 5364060376340
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)