Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002517
(1215 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001193300.1| ADAM DEC1 [Bos taurus]. 563 e-160
Alignment gi|XP_002689830.1| PREDICTED: Disintegrin and metalloproteinase... 276 2e-74
Alignment gi|XP_583562.4| PREDICTED: ADAM metallopeptidase domain 28 [Bos... 276 2e-74
Alignment gi|XP_597877.4| PREDICTED: a disintegrin and metallopeptidase d... 166 5e-41
Alignment gi|XP_002692278.1| PREDICTED: ADAM metallopeptidase domain 33 [... 158 8e-39
Alignment gi|XP_601929.4| PREDICTED: ADAM metallopeptidase domain 33 [Bos... 158 8e-39
Alignment gi|NP_001068943.2| disintegrin and metalloproteinase domain-con... 150 3e-36
Alignment gi|NP_001001156.1| disintegrin and metalloproteinase domain-con... 148 1e-35
Alignment gi|NP_001179747.2| disintegrin and metalloproteinase domain-con... 140 3e-33
Alignment gi|XP_002698765.1| PREDICTED: ADAM metallopeptidase domain 9 (m... 140 3e-33
>ref|NP_001193300.1| ADAM DEC1 [Bos taurus].
Length = 453
Score = 563 bits (1450), Expect = e-160
Identities = 277/361 (76%), Positives = 305/361 (84%)
Frame = +1
Query: 133 IVQPQAIAMKEMPESETYEVVLPKKLHILHKRETQNNQTEKPGKEERYEPELQYQIILNG 312
I+Q QAI +++ ESE YEVV PKKLHILHKRE QNNQ EK GKEERYEPELQYQ++LNG
Sbjct: 12 IIQTQAITIRQTLESELYEVVHPKKLHILHKREIQNNQKEKHGKEERYEPELQYQMMLNG 71
Query: 313 EEVILSLRKTEHLLGPDYTETYYSPRGEEITKSPQIMEHCYYKGHILNERDSVASISTCD 492
EEVILSL+K EHLLGPDYTETYYSP GEEIT PQ MEHCYYKGHILNE+DSVASISTCD
Sbjct: 72 EEVILSLQKAEHLLGPDYTETYYSPGGEEITTRPQNMEHCYYKGHILNEKDSVASISTCD 131
Query: 493 GLRGYFTHHDQRYMIKPLNSTDQEEHAVLTHNQEELDPTNLTCGVRNVGRKQGHVRTSRS 672
GLRGYFTHH+QRYMIKPL ST +EEHA+L +NQEEL+P N TCGVRNVGRKQ +RTSRS
Sbjct: 132 GLRGYFTHHNQRYMIKPLKSTGREEHAILRYNQEELNPANHTCGVRNVGRKQDLIRTSRS 191
Query: 673 LKNPEKEDFLQAEKYIDLFLVLDRAFYNMHNGNITSIRSFVFDVINLLNVIYNTIDIQVT 852
L++PE E+FLQ EKYIDL LVLD AFY M+N NIT IRSFVFDVINLLNVIYNTIDIQV+
Sbjct: 192 LRSPEIEEFLQGEKYIDLLLVLDNAFYKMYNENITVIRSFVFDVINLLNVIYNTIDIQVS 251
Query: 853 LVGMEIWSDGDKIKVVPETSVTFNNFLNWHHSNLRKMKTHDHAQLLSGISFKNGIAGMAA 1032
LVGMEIWS+ DKIKVVP T+VTF NFLNWH+SNL KMKTHDHAQLLSG+ FK +AG+A
Sbjct: 252 LVGMEIWSNSDKIKVVPSTAVTFKNFLNWHYSNLGKMKTHDHAQLLSGVGFKTRMAGLAT 311
Query: 1033 XXXXXXXXXXXVIEAKRKNRVSLVXLMSHELGHVLGMPDVPYDTKCSSGGVCMKSYLSSK 1212
VIE KRKN VSLV +MSHELGHVLGMPDVP++TKC SG M YLSSK
Sbjct: 312 SNSLCSPSSVAVIEGKRKNSVSLVGVMSHELGHVLGMPDVPHNTKCPSGSCVMNKYLSSK 371
Query: 1213 F 1215
F
Sbjct: 372 F 372
>ref|XP_002689830.1| PREDICTED: Disintegrin and metalloproteinase domain-containing
protein 28-like [Bos taurus].
Length = 725
Score = 276 bits (707), Expect = 2e-74
Identities = 146/357 (40%), Positives = 218/357 (61%), Gaps = 6/357 (1%)
Frame = +1
Query: 154 AMKEMPESETYEVVLPKKLHILHKRETQNNQTEKPGKEERYEPELQYQIILNGEEVILSL 333
++KE+P + YEVV PK+LH HKRE ++ PG++E +E EL+Y++ +NG+ +L L
Sbjct: 11 SIKELPGVQNYEVVYPKRLHPRHKREVKD-----PGQQENFETELKYEMTVNGKIAVLYL 65
Query: 334 RKTEHLLGPDYTETYYSPRGEEITKSPQIMEHCYYKGHILNERDSVASISTCDGLRGYFT 513
+K ++LL P YTETYY+ G+ +T SPQIM++CYY+GHI+NE+ S ASISTC GLRGYF+
Sbjct: 66 KKNKNLLAPGYTETYYNSSGKAVTTSPQIMDNCYYQGHIVNEKVSDASISTCRGLRGYFS 125
Query: 514 HHDQRYMIKPLNST--DQEEHAVLTHNQEELDPTNLTCGVRNVGRKQG-HVR--TSRSLK 678
DQ+Y I+PL+ T D++EHA+ H+ EE T +CG+ + G H++ +S SL
Sbjct: 126 QGDQKYFIEPLSLTNQDEQEHALFKHDPEE-QKTKSSCGMNDTIWAPGIHLKALSSTSLA 184
Query: 679 NPEKEDFLQAEKYIDLFLVLDRAFYNMHNGNITSIRSFVFDVINLLNVIYNTIDIQVTLV 858
+ + F + +KY++ +LVLD + HN + IR VF+++N +N++Y ++ V L+
Sbjct: 185 TSKDQKFWEKKKYVEYYLVLDHGEFKRHNQDQEEIRKTVFEMVNYINMLYKKLNTYVALI 244
Query: 859 GMEIWSDGDKIKVVPETSVTFNNFLNWHHSNLRKMKTHDHAQLLSGISFKNGIAGMA-AX 1035
GMEIW+D DKI + +T NF W L K K HD AQLL+ ++F G+A
Sbjct: 245 GMEIWNDKDKIDISSNAKLTLENFSKWRTGVLLKRKHHDVAQLLTTVAFSGTTVGLAYIS 304
Query: 1036 XXXXXXXXXXVIEAKRKNRVSLVXLMSHELGHVLGMPDVPYDTKCSSGGVCMKSYLS 1206
+I+ N + + M+HE+GH GM YD KC S M LS
Sbjct: 305 TMCSPDFSAGIIKDHSNNALQVAGTMAHEMGHNFGMFHDNYDCKCPSIECVMDGSLS 361
>ref|XP_583562.4| PREDICTED: ADAM metallopeptidase domain 28 [Bos taurus].
Length = 742
Score = 276 bits (707), Expect = 2e-74
Identities = 146/357 (40%), Positives = 218/357 (61%), Gaps = 6/357 (1%)
Frame = +1
Query: 154 AMKEMPESETYEVVLPKKLHILHKRETQNNQTEKPGKEERYEPELQYQIILNGEEVILSL 333
++KE+P + YEVV PK+LH HKRE ++ PG++E +E EL+Y++ +NG+ +L L
Sbjct: 28 SIKELPGVQNYEVVYPKRLHPRHKREVKD-----PGQQENFETELKYEMTVNGKIAVLYL 82
Query: 334 RKTEHLLGPDYTETYYSPRGEEITKSPQIMEHCYYKGHILNERDSVASISTCDGLRGYFT 513
+K ++LL P YTETYY+ G+ +T SPQIM++CYY+GHI+NE+ S ASISTC GLRGYF+
Sbjct: 83 KKNKNLLAPGYTETYYNSSGKAVTTSPQIMDNCYYQGHIVNEKVSDASISTCRGLRGYFS 142
Query: 514 HHDQRYMIKPLNST--DQEEHAVLTHNQEELDPTNLTCGVRNVGRKQG-HVR--TSRSLK 678
DQ+Y I+PL+ T D++EHA+ H+ EE T +CG+ + G H++ +S SL
Sbjct: 143 QGDQKYFIEPLSLTNQDEQEHALFKHDPEE-QKTKSSCGMNDTIWAPGIHLKALSSTSLA 201
Query: 679 NPEKEDFLQAEKYIDLFLVLDRAFYNMHNGNITSIRSFVFDVINLLNVIYNTIDIQVTLV 858
+ + F + +KY++ +LVLD + HN + IR VF+++N +N++Y ++ V L+
Sbjct: 202 TSKDQKFWEKKKYVEYYLVLDHGEFKRHNQDQEEIRKTVFEMVNYINMLYKKLNTYVALI 261
Query: 859 GMEIWSDGDKIKVVPETSVTFNNFLNWHHSNLRKMKTHDHAQLLSGISFKNGIAGMA-AX 1035
GMEIW+D DKI + +T NF W L K K HD AQLL+ ++F G+A
Sbjct: 262 GMEIWNDKDKIDISSNAKLTLENFSKWRTGVLLKRKHHDVAQLLTTVAFSGTTVGLAYIS 321
Query: 1036 XXXXXXXXXXVIEAKRKNRVSLVXLMSHELGHVLGMPDVPYDTKCSSGGVCMKSYLS 1206
+I+ N + + M+HE+GH GM YD KC S M LS
Sbjct: 322 TMCSPDFSAGIIKDHSNNALQVAGTMAHEMGHNFGMFHDNYDCKCPSIECVMDGSLS 378
>ref|XP_597877.4| PREDICTED: a disintegrin and metallopeptidase domain 8-like [Bos
taurus].
Length = 1092
Score = 166 bits (419), Expect = 5e-41
Identities = 108/360 (30%), Positives = 172/360 (47%), Gaps = 10/360 (2%)
Frame = +1
Query: 166 MPESETYEVVLPKKLHILHKRETQNNQTEKPGKEERYEPELQYQIILNGEEVILSLRKTE 345
+P E YEVV P++L R P Y + Y + G L LRK
Sbjct: 83 LPHVEQYEVVRPRRLPAPRARRAL------PSHLGLYPESVSYVLGARGHTFTLHLRKNR 136
Query: 346 HLLGPDYTETYYSPRGEEITKSPQIMEHCYYKGHILNERDSVASISTCDGLRGYFTHHDQ 525
L+G Y ETY + G ++T+ Q +HC+Y+GH+ S AS+STC GLRG+F
Sbjct: 137 DLVGSGYVETYTAANGSQVTEQLQRQDHCFYQGHVEGHPHSAASLSTCAGLRGFFQAGPA 196
Query: 526 RYMIKPLNSTDQE-EHAVLT--HNQEELDPTNLTCGVRNVGRKQG-HVRTSRSLKNPEKE 693
+I+PL +E HA+ H Q+E TCGV + + R S + + E
Sbjct: 197 VRLIEPLAEAGEEGPHALYLAQHLQQEAG----TCGVNDSSLESILGPRVSAAFRPRWSE 252
Query: 694 DFLQAEKYIDLFLVLDRAFYNMHNGNITSIRSFVFDVINLLNVIYNTIDIQVTLVGMEIW 873
+ +Y++LF+V D G+ ++R V +V+N ++ +Y ++ +V LVG+E+W
Sbjct: 253 P--RETRYVELFVVTDS---KERFGSREAVRQRVLEVVNHVDKLYQELNFRVVLVGLEMW 307
Query: 874 SDGDKIKVVPETSVTFNNFLNWHHSNLRKMKTHDHAQLLSGISFKNGIAGMAAXXXXXXX 1053
+ GDKI++ + T +NFL W L + HD+ QL++G+ F G+A
Sbjct: 308 NGGDKIQISSQPDATLDNFLAWRTRELVGRQAHDNVQLITGVDFTGTTVGLAKVSTMCSS 367
Query: 1054 XXXXVIEAKRKNRVSLVXLMSHELGHVLGMPDVPYDTKC------SSGGVCMKSYLSSKF 1215
V + +N + + M+HE+GH LGM C GG M + + S++
Sbjct: 368 SSGAVNQDHSQNPIGVASTMAHEMGHNLGMDHDENVAGCYCPVPREGGGCVMAASIGSQY 427
>ref|XP_002692278.1| PREDICTED: ADAM metallopeptidase domain 33 [Bos taurus].
Length = 900
Score = 158 bits (400), Expect = 8e-39
Identities = 94/324 (29%), Positives = 160/324 (49%), Gaps = 12/324 (3%)
Frame = +1
Query: 280 PELQYQIIL---NGEEVILSLRKTEHLLGPDYTETYYSPRGEEITKSPQIMEHCYYKGHI 450
P+LQ +++ G+E++L L K LL P YTET+YSP G + P +HC+Y GH+
Sbjct: 172 PKLQVRLVALEAEGQELLLELEKNHRLLAPGYTETHYSPDGRPVVLFPNHKDHCHYHGHV 231
Query: 451 LNERDSVASISTCDGLRGYFT-HHDQRYMIKPLNSTDQEEHAVLTH---NQEELDPTNLT 618
DS +S C G+RG T + Y + P + D ++ LTH E+L T
Sbjct: 232 RGFLDSWVILSICSGMRGLITLSSNASYYVHPSPAGDSKD--FLTHRIFRVEQLFRGKGT 289
Query: 619 CGVRNVGRKQGHVRTSRSLKNPEKEDFLQAEKYIDLFLVLDRAFYNMHNGNITSIRSFVF 798
CG R+ K+ + S + + E+ + L++ +Y++L++V D + + N+ + +
Sbjct: 290 CGHRDPKDKRDTISLSCATQIRERRESLRSPRYLELYIVGDHTLFLTQHRNLNHAKQRLL 349
Query: 799 DVINLLNVIYNTIDIQVTLVGMEIWSDGDKIKVVPETSVTFNNFLNWHHSNLRKMKTHDH 978
++ N ++ I T+DI+V L G+E+W++ D+ +V P+ + T FL W L + HD
Sbjct: 350 EIANYVDQILRTLDIKVVLTGLEVWTEQDQSRVTPDANATLWAFLQWRR-GLWARQPHDS 408
Query: 979 AQLLSGISFKNGIAGMAAXXXXXXXXXXXVIEAKRKN-RVSLVXLMSHELGHVLGMPDVP 1155
AQLL+G +F+ G+A + + M+HE+GH LG+ P
Sbjct: 409 AQLLTGQAFRGATVGLAPVEGMCLAESSGGVTTDHSEFSIGAAATMAHEIGHSLGLSHDP 468
Query: 1156 Y----DTKCSSGGVCMKSYLSSKF 1215
+ + GG M + F
Sbjct: 469 HGCCAEAAVEQGGCVMAAATGHPF 492
>ref|XP_601929.4| PREDICTED: ADAM metallopeptidase domain 33 [Bos taurus].
Length = 1065
Score = 158 bits (400), Expect = 8e-39
Identities = 94/324 (29%), Positives = 160/324 (49%), Gaps = 12/324 (3%)
Frame = +1
Query: 280 PELQYQIIL---NGEEVILSLRKTEHLLGPDYTETYYSPRGEEITKSPQIMEHCYYKGHI 450
P+LQ +++ G+E++L L K LL P YTET+YSP G + P +HC+Y GH+
Sbjct: 337 PKLQVRLVALEAEGQELLLELEKNHRLLAPGYTETHYSPDGRPVVLFPNHKDHCHYHGHV 396
Query: 451 LNERDSVASISTCDGLRGYFT-HHDQRYMIKPLNSTDQEEHAVLTH---NQEELDPTNLT 618
DS +S C G+RG T + Y + P + D ++ LTH E+L T
Sbjct: 397 RGFLDSWVILSICSGMRGLITLSSNASYYVHPSPAGDSKD--FLTHRIFRVEQLFRGKGT 454
Query: 619 CGVRNVGRKQGHVRTSRSLKNPEKEDFLQAEKYIDLFLVLDRAFYNMHNGNITSIRSFVF 798
CG R+ K+ + S + + E+ + L++ +Y++L++V D + + N+ + +
Sbjct: 455 CGHRDPKDKRDTISLSCATQIRERRESLRSPRYLELYIVGDHTLFLTQHRNLNHAKQRLL 514
Query: 799 DVINLLNVIYNTIDIQVTLVGMEIWSDGDKIKVVPETSVTFNNFLNWHHSNLRKMKTHDH 978
++ N ++ I T+DI+V L G+E+W++ D+ +V P+ + T FL W L + HD
Sbjct: 515 EIANYVDQILRTLDIKVVLTGLEVWTEQDQSRVTPDANATLWAFLQWRR-GLWARQPHDS 573
Query: 979 AQLLSGISFKNGIAGMAAXXXXXXXXXXXVIEAKRKN-RVSLVXLMSHELGHVLGMPDVP 1155
AQLL+G +F+ G+A + + M+HE+GH LG+ P
Sbjct: 574 AQLLTGQAFRGATVGLAPVEGMCLAESSGGVTTDHSEFSIGAAATMAHEIGHSLGLSHDP 633
Query: 1156 Y----DTKCSSGGVCMKSYLSSKF 1215
+ + GG M + F
Sbjct: 634 HGCCAEAAVEQGGCVMAAATGHPF 657
>ref|NP_001068943.2| disintegrin and metalloproteinase domain-containing protein 19 [Bos
taurus].
Length = 906
Score = 150 bits (378), Expect = 3e-36
Identities = 94/331 (28%), Positives = 162/331 (48%), Gaps = 7/331 (2%)
Frame = +1
Query: 244 QTEKPGKEERYEPELQYQIILNGEEVILSLRKTEHLLGPDYTETYYSPRGEEITKSPQIM 423
+T + E++ + + +++ G E+IL L K EHL P YTET Y+P G+ T + +
Sbjct: 42 KTAESPMREKHPLKAELRVMAEGRELILDLEKNEHLFAPAYTETCYTPSGDAQTTTLKSE 101
Query: 424 EHCYYKGHILNERDSVASISTCDGLRG-YFTHHDQRYMIKPLNSTDQEEHAVLTHNQEEL 600
+HC+Y G + S +STC G+RG + Y+I+PL D E H + + E L
Sbjct: 102 DHCFYHGTVRKAEQSSVMLSTCRGMRGLIIVSSNLSYIIEPL--PDSESHHRI-YRSEHL 158
Query: 601 DPTNLTCGVRNVGRKQGHVRTSRSLKNPE--KEDFLQAEKYIDLFLVLDRAFYNMHNGNI 774
CG R T+++ K P K + L + KY++L+LV D A + + +
Sbjct: 159 KLPLGNCGFEPTARDWVPQFTNQTKKRPRRMKREDLHSMKYVELYLVADYAEFQKNGLDQ 218
Query: 775 TSIRSFVFDVINLLNVIYNTIDIQVTLVGMEIWSDGDKIKVVPETSVTFNNFLNWHHSNL 954
+ + + ++ N ++ Y +++I++ LVG+E+W+ G+ +V T +FL+W L
Sbjct: 219 DATKHKLMEIANYVDKFYRSLNIRIALVGLEVWTHGNMCEVSENPYSTLWSFLSWRRKLL 278
Query: 955 RKMKTHDHAQLLSGISFKNGIAGMAAXXXXXXXXXXXVIEAKR-KNRVSLVXLMSHELGH 1131
+ K HD+AQL++G+SF G+A + +N + + M+HE+GH
Sbjct: 279 TR-KNHDNAQLITGMSFHGTTIGLAPLMAMCSVYQSGGVNMDHSENAIGVAATMAHEMGH 337
Query: 1132 VLGMPDVPYD---TKCSSGGVCMKSYLSSKF 1215
GM D + GG M + F
Sbjct: 338 NFGMSHDSADCCSASAADGGCIMAAATGHPF 368
>ref|NP_001001156.1| disintegrin and metalloproteinase domain-containing protein 12 [Bos
taurus].
Length = 917
Score = 148 bits (373), Expect = 1e-35
Identities = 87/312 (27%), Positives = 155/312 (49%), Gaps = 5/312 (1%)
Frame = +1
Query: 253 KPGKEERYEPELQYQIILNGEEVILSLRKTEHLLGPDYTETYYSPRGEEITKSPQIMEHC 432
K E + L ++I L +E+I++L + E L+ +TET+Y G +I+ HC
Sbjct: 70 KTADSENHPGVLNFRIQLTSKELIVNLERNEGLIASSFTETHYLQDGTDISLIRNYTGHC 129
Query: 433 YYKGHILNERDSVASISTCDGLRGYFTHHDQRYMIKPL-NSTDQEEHAVLTHNQEELDPT 609
YY G + S S+STC GLRG T + Y+++P+ N+T++ + + E L T
Sbjct: 130 YYHGRVQGSFGSAVSLSTCSGLRGLITFENNTYILEPMKNATNRYKLFPV----ENLPGT 185
Query: 610 NLTCGVRNVGRKQGHVR---TSRSLKNPEKEDFLQAEKYIDLFLVLDRAFYNMHNGNITS 780
+CG G H R S++ +K + L+ KY++L +V D + ++
Sbjct: 186 WGSCGSNTSGLTL-HDRLPLASQTQTRRQKRETLKMTKYVELVIVADNREFQRQGKDLEK 244
Query: 781 IRSFVFDVINLLNVIYNTIDIQVTLVGMEIWSDGDKIKVVPETSVTFNNFLNWHHSNLRK 960
++ + ++ N ++ Y ++I++ LVG+E+W+D DK + + + + FL+W L
Sbjct: 245 VKQRLIEIANHVDKFYRPLNIRIVLVGVEVWNDIDKCSISQDPFTSLHEFLDWRKMKLLP 304
Query: 961 MKTHDHAQLLSGISFKNGIAGMA-AXXXXXXXXXXXVIEAKRKNRVSLVXLMSHELGHVL 1137
K+HD+AQL+SG+ F+ GMA ++ + + ++HELGH
Sbjct: 305 RKSHDNAQLISGVYFQGTTVGMAPIMSMCTAEQSGGIVMDHSDSPLGAAVTLAHELGHNF 364
Query: 1138 GMPDVPYDTKCS 1173
GM + CS
Sbjct: 365 GMNHDTLERGCS 376
>ref|NP_001179747.2| disintegrin and metalloproteinase domain-containing protein 9 [Bos
taurus].
Length = 821
Score = 140 bits (352), Expect = 3e-33
Identities = 93/330 (28%), Positives = 159/330 (48%), Gaps = 9/330 (2%)
Frame = +1
Query: 181 TYEVVLPKKLHILHKRETQNNQTEKPGKEERYEPELQYQIILNGEEVILSLRKTEHLLGP 360
+YE++ P KL + + +P E+ + Y I G+E I+ L + + LL
Sbjct: 42 SYEIITPWKL------TRERREAPRPFSEQ-----VSYVIQAEGKEHIIHLERNKDLLPK 90
Query: 361 DYTETYYSPRGEEITKSPQIMEHCYYKGHILNERDSVASISTCDGLRGYFTHHDQRYMIK 540
D+ Y+ G I+ P I HC+Y+G++ DS ++S C GLRG + Y I+
Sbjct: 91 DFVVYTYNKEGALISDHPSIQNHCHYRGYVEGTYDSSIALSDCFGLRGLLHIENVSYGIE 150
Query: 541 PLNSTDQEEHAVLTHNQEELDPTNLTCGVRNV--------GRKQGHVRTSRSLKNPEKED 696
PL ++ EH + + +++ L CGV N ++ H ++ L+ K D
Sbjct: 151 PLQNSSHFEH--IFYRMDDVHQEPLKCGVSNKVMEEETTKDEEEEHPSITQLLRR--KRD 206
Query: 697 FLQAEKYIDLFLVLDRAFYNMHNGNITSIRSFVFDVINLLNVIYNTIDIQVTLVGMEIWS 876
L +Y++LF+V+++ Y+ N T++R + + N L+ +Y ++I++ LVG+EIW+
Sbjct: 207 ILPQTRYVELFIVVEKEKYDNMGKNQTAVREEMISLANYLDSMYIMLNIRIVLVGLEIWT 266
Query: 877 DGDKIKVVPETSVTFNNFLNWHHSNLRKMKTHDHAQLLSGISFKNGIAGMAAXXXXXXXX 1056
+ + I + +NF+ W L + HD AQL+ F G AGMA
Sbjct: 267 NENLISMAGGAGDVLSNFVQWREKFLITRRRHDSAQLILKRGF-GGTAGMAFVGTVCSRS 325
Query: 1057 XXXVIEAKRKNRV-SLVXLMSHELGHVLGM 1143
I + V +++HELGH LGM
Sbjct: 326 HAGGINVFGQIPVEKFASIVAHELGHNLGM 355
>ref|XP_002698765.1| PREDICTED: ADAM metallopeptidase domain 9 (meltrin gamma) [Bos
taurus].
Length = 796
Score = 140 bits (352), Expect = 3e-33
Identities = 93/330 (28%), Positives = 159/330 (48%), Gaps = 9/330 (2%)
Frame = +1
Query: 181 TYEVVLPKKLHILHKRETQNNQTEKPGKEERYEPELQYQIILNGEEVILSLRKTEHLLGP 360
+YE++ P KL + + +P E+ + Y I G+E I+ L + + LL
Sbjct: 17 SYEIITPWKL------TRERREAPRPFSEQ-----VSYVIQAEGKEHIIHLERNKDLLPK 65
Query: 361 DYTETYYSPRGEEITKSPQIMEHCYYKGHILNERDSVASISTCDGLRGYFTHHDQRYMIK 540
D+ Y+ G I+ P I HC+Y+G++ DS ++S C GLRG + Y I+
Sbjct: 66 DFVVYTYNKEGALISDHPSIQNHCHYRGYVEGTYDSSIALSDCFGLRGLLHIENVSYGIE 125
Query: 541 PLNSTDQEEHAVLTHNQEELDPTNLTCGVRNV--------GRKQGHVRTSRSLKNPEKED 696
PL ++ EH + + +++ L CGV N ++ H ++ L+ K D
Sbjct: 126 PLQNSSHFEH--IFYRMDDVHQEPLKCGVSNKVMEEETTKDEEEEHPSITQLLRR--KRD 181
Query: 697 FLQAEKYIDLFLVLDRAFYNMHNGNITSIRSFVFDVINLLNVIYNTIDIQVTLVGMEIWS 876
L +Y++LF+V+++ Y+ N T++R + + N L+ +Y ++I++ LVG+EIW+
Sbjct: 182 ILPQTRYVELFIVVEKEKYDNMGKNQTAVREEMISLANYLDSMYIMLNIRIVLVGLEIWT 241
Query: 877 DGDKIKVVPETSVTFNNFLNWHHSNLRKMKTHDHAQLLSGISFKNGIAGMAAXXXXXXXX 1056
+ + I + +NF+ W L + HD AQL+ F G AGMA
Sbjct: 242 NENLISMAGGAGDVLSNFVQWREKFLITRRRHDSAQLILKRGF-GGTAGMAFVGTVCSRS 300
Query: 1057 XXXVIEAKRKNRV-SLVXLMSHELGHVLGM 1143
I + V +++HELGH LGM
Sbjct: 301 HAGGINVFGQIPVEKFASIVAHELGHNLGM 330
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 43,105,795
Number of extensions: 1050739
Number of successful extensions: 2709
Number of sequences better than 1.0e-05: 71
Number of HSP's gapped: 2574
Number of HSP's successfully gapped: 71
Length of query: 405
Length of database: 17,681,374
Length adjustment: 105
Effective length of query: 300
Effective length of database: 14,207,134
Effective search space: 4262140200
Effective search space used: 4262140200
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002517
(1215 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_850947.1| PREDICTED: similar to ADAM DEC1 precursor (A di... 568 e-162
Alignment gi|XP_850956.1| PREDICTED: similar to a disintegrin and metallo... 268 1e-71
Alignment gi|XP_534573.2| PREDICTED: similar to a disintegrin and metallo... 207 1e-53
Alignment gi|XP_542918.2| PREDICTED: similar to a disintegrin and metallo... 154 2e-37
Alignment gi|XP_546274.2| PREDICTED: similar to a disintegrin and metallo... 151 1e-36
Alignment gi|NP_001182331.1| disintegrin and metalloproteinase domain-con... 138 1e-32
Alignment gi|XP_534679.2| PREDICTED: similar to a disintegrin and metallo... 130 3e-30
Alignment gi|XP_849543.1| PREDICTED: similar to a disintegrin and metallo... 116 5e-26
Alignment gi|XP_537500.2| PREDICTED: similar to a disintegrin and metallo... 108 1e-23
Alignment gi|XP_859842.1| PREDICTED: similar to a disintegrin and metallo... 97 2e-20
>ref|XP_850947.1| PREDICTED: similar to ADAM DEC1 precursor (A disintegrin and
metalloproteinase domain-like protein decysin 1)
(ADAM-like protein decysin 1) [Canis familiaris].
Length = 488
Score = 568 bits (1463), Expect = e-162
Identities = 277/361 (76%), Positives = 308/361 (85%)
Frame = +1
Query: 133 IVQPQAIAMKEMPESETYEVVLPKKLHILHKRETQNNQTEKPGKEERYEPELQYQIILNG 312
I+Q QAIA+K+ PE + YEVV PKKLHIL+KRE QN+QTE GK+ERYEPELQYQI+LNG
Sbjct: 12 IIQTQAIAIKQTPELQLYEVVRPKKLHILYKREIQNHQTEN-GKDERYEPELQYQIVLNG 70
Query: 313 EEVILSLRKTEHLLGPDYTETYYSPRGEEITKSPQIMEHCYYKGHILNERDSVASISTCD 492
+EV+L L+K++HLLGPDYTETYYSPRGEEIT SPQ MEHCYYKGHILNE DSVASI+TC+
Sbjct: 71 KEVVLHLQKSKHLLGPDYTETYYSPRGEEITTSPQNMEHCYYKGHILNENDSVASINTCN 130
Query: 493 GLRGYFTHHDQRYMIKPLNSTDQEEHAVLTHNQEELDPTNLTCGVRNVGRKQGHVRTSRS 672
GLRGYFTHH+QRY+IKPL STDQEEHA+LT+NQEELD N TCGVRNVGRKQGH+RTSRS
Sbjct: 131 GLRGYFTHHNQRYVIKPLKSTDQEEHAILTYNQEELDLANHTCGVRNVGRKQGHIRTSRS 190
Query: 673 LKNPEKEDFLQAEKYIDLFLVLDRAFYNMHNGNITSIRSFVFDVINLLNVIYNTIDIQVT 852
L +PE+EDFLQAEKYIDLFLVLD AFYN++ GN+TSIRSFVFDV+NLLNVIYNT+DIQV
Sbjct: 191 LNSPEQEDFLQAEKYIDLFLVLDNAFYNIYKGNLTSIRSFVFDVMNLLNVIYNTLDIQVA 250
Query: 853 LVGMEIWSDGDKIKVVPETSVTFNNFLNWHHSNLRKMKTHDHAQLLSGISFKNGIAGMAA 1032
LVGMEIWSDGDKI VV TFNNFLNWH SNLRKMK HDHAQLLSG+ F N GMAA
Sbjct: 251 LVGMEIWSDGDKINVVSNIGDTFNNFLNWHRSNLRKMKIHDHAQLLSGLGFDNRRVGMAA 310
Query: 1033 XXXXXXXXXXXVIEAKRKNRVSLVXLMSHELGHVLGMPDVPYDTKCSSGGVCMKSYLSSK 1212
VIEAK+KN V+LV LMSHELGHVLGMPD+PY TKC SG M YLSSK
Sbjct: 311 SNSLCSPSSVAVIEAKKKNNVALVGLMSHELGHVLGMPDIPYYTKCPSGSCVMNQYLSSK 370
Query: 1213 F 1215
F
Sbjct: 371 F 371
>ref|XP_850956.1| PREDICTED: similar to a disintegrin and metalloproteinase domain 28
isoform 1 preproprotein [Canis familiaris].
Length = 1004
Score = 268 bits (684), Expect = 1e-71
Identities = 149/360 (41%), Positives = 213/360 (59%), Gaps = 10/360 (2%)
Frame = +1
Query: 157 MKEMPESETYEVVLPKKLHILHKRETQNNQTEKPGKEERYEPELQYQIILNGEEVILSLR 336
+KE+P + YEVV P++LH LHKRE ++ P ++E++E EL+Y++ +NG+ +L L+
Sbjct: 247 IKELPGIKNYEVVYPRRLHPLHKREVKD-----PDQQEKFETELKYKMTVNGKIAVLYLK 301
Query: 337 KTEHLLGPDYTETYYSPRGEEITKSPQIMEHCYYKGHILNERDSVASISTCDGLRGYFTH 516
K LL P YTET+Y+ GEEIT SPQIM+ CYY+GHI+NE+ S ASISTC GLRGYF+
Sbjct: 302 KNNGLLAPGYTETHYNSTGEEITTSPQIMDDCYYQGHIINEKVSDASISTCRGLRGYFSQ 361
Query: 517 HDQRYMIKPLNST--DQEEHAVLTHNQEELDPTNLTCGVRNV----GRKQG---HVRTSR 669
DQ+Y+I+PL+ T D +EHA+ ++ E TN TCG+ N+ G +Q + S
Sbjct: 362 GDQKYLIEPLSPTNDDGQEHALFKYDPHE-KKTNSTCGMDNILWAHGSRQSVATRLVKSN 420
Query: 670 SLKNPEKEDFLQAEKYIDLFLVLDRAFYNMHNGNITSIRSFVFDVINLLNVIYNTIDIQV 849
K PE+ +KYI+ +LVLD + +N + IR VF++ N +N++Y ++ V
Sbjct: 421 DQKGPER------KKYIEYYLVLDNGEFKKYNQDREKIRKRVFEMANYVNMLYKKLNTHV 474
Query: 850 TLVGMEIWSDGDKIKVVPETSVTFNNFLNWHHSNLRKMKTHDHAQLLSGISFKNGIAGMA 1029
LVG+EIW+D DKIK+ P S T NF W S LRK K HD AQL++ G+A
Sbjct: 475 ALVGIEIWNDEDKIKITPNASSTLENFSKWRGSVLRKRKPHDIAQLITATKLSGTTVGLA 534
Query: 1030 -AXXXXXXXXXXXVIEAKRKNRVSLVXLMSHELGHVLGMPDVPYDTKCSSGGVCMKSYLS 1206
+++ N + + M+HE+GH GM Y KC S M LS
Sbjct: 535 FMSTMCSPYHSVGIVQDHSSNVLRVAGTMAHEMGHNFGMFHDSYVCKCPSTICVMDRALS 594
>ref|XP_534573.2| PREDICTED: similar to a disintegrin and metalloproteinase domain 7
[Canis familiaris].
Length = 875
Score = 207 bits (528), Expect = 1e-53
Identities = 118/341 (34%), Positives = 183/341 (53%), Gaps = 9/341 (2%)
Frame = +1
Query: 178 ETYEVVLPKKLHILHKRETQNNQTEKPGKEERYEPELQYQIILNGEEVILSLRKTEHLLG 357
E EVV PKKL ++ KRE + +E YE EL Y++ L + +IL L ++ LG
Sbjct: 25 EGQEVVYPKKLPLMQKREVWH--IHDYDIQETYEEELLYELRLTRKTLILHLLRSREFLG 82
Query: 358 PDYTETYYSPRGEEITKSPQIMEHCYYKGHILNERDSVASISTCDGLRGYFTHHDQRYMI 537
+Y+ETYYS +GE IT P +HC+Y+G I++E DS ASISTC+GLRG+F +DQRY+I
Sbjct: 83 LNYSETYYSTKGEMITSYPSTTDHCFYQGSIIHEFDSAASISTCNGLRGFFRVYDQRYLI 142
Query: 538 KPLNSTDQEEHAVLTHNQEELDPTNLTCGVRNVGRKQGHVRTSRSLKNPEKEDFLQAEKY 717
+P+ +D+ +H V +N + N +C N RK + + K + + EKY
Sbjct: 143 EPVKYSDEGQHLVFRYNPKMQYAANYSCTELNFTRK-NDPKDDIKIMEDLKIERIHKEKY 201
Query: 718 IDLFLVLDRAFYNMHNGNITSIRSFVFDVINLLNVIYNTIDIQVTLVGMEIWSDGDKIKV 897
++LF+V D Y ++ ++++R+ ++ ++N +N+IY +DI VTLVG+EIW++ DK+ +
Sbjct: 202 VELFIVADNNVYRRNSSPLSNLRNRIWGMVNFVNMIYKILDIHVTLVGLEIWTNEDKVHI 261
Query: 898 VPETSVTFNNFLNWHHSNLRKMKTHDHAQLLS---------GISFKNGIAGMAAXXXXXX 1050
T F W L+K DH LLS G SF GI
Sbjct: 262 DSNIENTLLRFSTWQEIILKKRNNFDHVLLLSGKWLYTHAQGTSFSEGIC--------LP 313
Query: 1051 XXXXXVIEAKRKNRVSLVXLMSHELGHVLGMPDVPYDTKCS 1173
V++ + + ++H+LGH GM Y C+
Sbjct: 314 YYSSSVVKDLLPDLNVVASRIAHQLGHNFGMKHDDYPCTCN 354
>ref|XP_542918.2| PREDICTED: similar to a disintegrin and metalloproteinase domain 33
isoform alpha preproprotein [Canis familiaris].
Length = 878
Score = 154 bits (389), Expect = 2e-37
Identities = 91/311 (29%), Positives = 152/311 (48%), Gaps = 9/311 (2%)
Frame = +1
Query: 310 GEEVILSLRKTEHLLGPDYTETYYSPRGEEITKSPQIMEHCYYKGHILNERDSVASISTC 489
G+E++L L K + LL P YTET+Y+P G+ + P +HC+Y GH+ DS STC
Sbjct: 174 GQELLLELEKNQ-LLAPGYTETHYNPDGQPVVLVPNHTDHCHYHGHVRGFPDSWVVFSTC 232
Query: 490 DGLRGYFTHH-DQRYMIKPLNSTDQEEHAVLTHNQ---EELDPTNLTCGVRNVGRKQGHV 657
G+RG T + Y + P ++ D E+ +TH ++L CG R+ K
Sbjct: 233 SGMRGLITLGCNASYYVHPWSAGDSEDF--ITHKMFQTQQLLSWKRACGHRDARNKGDMA 290
Query: 658 RTSRSLKNPEKEDFLQAEKYIDLFLVLDRAFYNMHNGNITSIRSFVFDVINLLNVIYNTI 837
SR+ + E+ + ++ K+++L++V D + + N+ + + +V N ++ I T+
Sbjct: 291 SLSRATQIKERREVRKSPKFLELYIVADHTLFLTQHRNLNHTKQRLLEVANYVDQILRTL 350
Query: 838 DIQVTLVGMEIWSDGDKIKVVPETSVTFNNFLNWHHSNLRKMKTHDHAQLLSGISFKNGI 1017
DIQV L G+E+W++ D+ +V P+ + T FL W L + HD AQLL+G +F+
Sbjct: 351 DIQVALTGLEVWTEQDQSRVSPDANATLWAFLQWRR-GLWARRPHDSAQLLTGRAFRGAT 409
Query: 1018 AGMAAXXXXXXXXXXXVIEAKRKN-RVSLVXLMSHELGHVLGMPDVP----YDTKCSSGG 1182
G+A + + M+HE+GH LG+ P + GG
Sbjct: 410 VGLAPIEGMCRAESSGGVSTDHSELPIGAAATMAHEIGHSLGLGHDPEGCCVEAAAEQGG 469
Query: 1183 VCMKSYLSSKF 1215
M + F
Sbjct: 470 CVMAAATGHPF 480
>ref|XP_546274.2| PREDICTED: similar to a disintegrin and metalloproteinase domain 19
isoform 2 preproprotein [Canis familiaris].
Length = 909
Score = 151 bits (381), Expect = 1e-36
Identities = 93/315 (29%), Positives = 161/315 (51%), Gaps = 7/315 (2%)
Frame = +1
Query: 220 HKRETQNNQTEKPGKEERYEPELQYQIILNGEEVILSLRKTEHLLGPDYTETYYSPRGEE 399
H+R +T + +E++ + + +I G+E+IL L K EHL P YTET+Y+P G
Sbjct: 34 HERIIPQWKTAESPTKEKHPLKAELRITAEGQELILDLEKNEHLFAPAYTETHYTPHGNP 93
Query: 400 ITKSPQIMEHCYYKGHILNERDSVASISTCDGLRGYFT-HHDQRYMIKPLNSTDQEEHAV 576
T + EHC+Y G + S ++STC G+RG T + Y+I+PL D E H
Sbjct: 94 QTTMLKSEEHCFYHGTVRKAEQSSVALSTCRGMRGLITVSSNLSYIIEPL--PDSEGHH- 150
Query: 577 LTHNQEELDPTNLTCGV---RNVGRKQGHVRTSRSLKNPE--KEDFLQAEKYIDLFLVLD 741
L + E L CG +++ + +++ K P K + L + KY++L+LV D
Sbjct: 151 LIYRSEHLKLPLGNCGFKYSKSITGDRVLPSMNQTKKRPRRMKREDLHSMKYVELYLVAD 210
Query: 742 RAFYNMHNGNITSIRSFVFDVINLLNVIYNTIDIQVTLVGMEIWSDGDKIKVVPETSVTF 921
A + + + + + + ++ N ++ Y +++I++ LVG+E+W+ G+ +V T
Sbjct: 211 YAEFQKNRRDQDATKHKLMEIANYVDKFYRSLNIRIALVGLEVWTHGNMCEVSENPYSTL 270
Query: 922 NNFLNWHHSNLRKMKTHDHAQLLSGISFKNGIAGMAAXXXXXXXXXXXVIEAKR-KNRVS 1098
+FL+W L K HD+AQL++G+SF G+A + +N +
Sbjct: 271 WSFLSWRR-KLLTQKNHDNAQLITGMSFHGTTIGLAPLMAMNSVYQSGGVNMDHSENAIG 329
Query: 1099 LVXLMSHELGHVLGM 1143
+ M+HE+GH GM
Sbjct: 330 VAATMAHEMGHNFGM 344
>ref|NP_001182331.1| disintegrin and metalloproteinase domain-containing protein 9 [Canis
lupus familiaris].
Length = 819
Score = 138 bits (347), Expect = 1e-32
Identities = 95/349 (27%), Positives = 164/349 (46%), Gaps = 10/349 (2%)
Frame = +1
Query: 181 TYEVVLPKKLHILHKRETQNNQTEKPGKEERYEPELQYQIILNGEEVILSLRKTEHLLGP 360
+YE++ P +L + + +P Y ++ Y I G+E I+ L + L
Sbjct: 42 SYEIITPWRL------TRERREAPRP-----YSEQVSYIIQAEGKEHIIHLERNNDFLPR 90
Query: 361 DYTETYYSPRGEEITKSPQIMEHCYYKGHILNERDSVASISTCDGLRGYFTHHDQRYMIK 540
D+ Y+ G I+ P + HC+Y+G++ +S ++S C GLRG + Y I+
Sbjct: 91 DFVVYTYNKEGALISDHPDVQNHCHYRGYVEGISNSSIALSDCFGLRGLLHIENVSYGIE 150
Query: 541 PLNSTDQEEHAVLTHNQEELDPTNLTCGVRNVGRKQGHVRTSRSLKNP--------EKED 696
PL ++ EH + + +++ L CGV N ++ T+ + P +
Sbjct: 151 PLQNSSHFEH--IFYRMDDVHKEPLKCGVSNKDMEKE--TTNYEEEEPLSVTQLLRRRRA 206
Query: 697 FLQAEKYIDLFLVLDRAFYNMHNGNITSIRSFVFDVINLLNVIYNTIDIQVTLVGMEIWS 876
L +Y++LF+V+D+ Y+M N T++R + + N L+ +Y ++I++ LVG+EIW+
Sbjct: 207 VLPQTRYVELFIVVDKERYDMMGRNQTAVREEMIRLANYLDSMYIMLNIRIVLVGLEIWT 266
Query: 877 DGDKIKVVPETSVTFNNFLNWHHSNLRKMKTHDHAQLLSGISFKNGIAGMAAXXXXXXXX 1056
+G+ I ++ NF+ W L + HD AQL+ F G AGMA
Sbjct: 267 NGNLINIIGGAGDVLGNFVQWREKFLITRRRHDSAQLVLKKGF-GGTAGMAFVGTVCSRS 325
Query: 1057 XXXVIEAKRKNRV-SLVXLMSHELGHVLGM-PDVPYDTKCSSGGVCMKS 1197
I + V + +++HELGH LGM D D C + M S
Sbjct: 326 HAGGINVFGQITVETFASIVAHELGHNLGMNHDDGRDCFCGAKSCIMNS 374
>ref|XP_534679.2| PREDICTED: similar to a disintegrin and metalloproteinase domain 1a
[Canis familiaris].
Length = 817
Score = 130 bits (327), Expect = 3e-30
Identities = 102/375 (27%), Positives = 167/375 (44%), Gaps = 6/375 (1%)
Frame = +1
Query: 37 ESWGDHILAL*STSQLPAVTSMAXXXXXXXXXIVQPQAIAMKEMPESETYEVVLPKKLHI 216
++W H+ L P + I P +YE V+PK L
Sbjct: 34 QTWAPHVKDLRRALVAPGPLCVRLGVLLLLVLIFLPSLYCDPGSVYYSSYETVIPKSLTA 93
Query: 217 LHKRETQNNQTEKPGKEERYEPELQYQIILNGEEVILSLR-KTEHLLGPDYTETYYSP-R 390
+ E PG++ Y +++ G++ ++ L+ K ++ + +Y++
Sbjct: 94 KGR--------EDPGEKA------SYVLLMQGQKQVIHLKVKRDYFVSNFPVFSYHNGVL 139
Query: 391 GEEITKSPQIMEHCYYKGHILNERDSVASISTCDGLRGYFTHHDQRYMIKPLNSTDQEEH 570
G+E+ P I C+Y+G+I S S++TC GLRG + Y I+P++++ + EH
Sbjct: 140 GQEM---PFISHDCHYEGYIEGVPGSFVSLNTCSGLRGILIREGKPYGIEPMDTSKRFEH 196
Query: 571 AVLTHNQEELDPTNLTCG---VRNVGRKQGHVRTSRSLKNPEKEDFLQAEKYIDLFLVLD 741
+ T + N+T V + R+QG R RSL+ P F KY+++F+V++
Sbjct: 197 VLYTMAHQARVSCNVTSKGSQVVSTSRQQGS-REPRSLQAPSS--FWSHTKYVEMFVVVN 253
Query: 742 RAFYNMHNGNITSIRSFVFDVINLLNVIYNTIDIQVTLVGMEIWSDGDKIKVVPETSVTF 921
+ M N+ V D+ L N+ I+ +V L GMEIW++GD I+V + VT
Sbjct: 254 HQRFQMWGSNVNETVQRVMDITALANIFTRGINTEVVLAGMEIWTEGDLIEVPADLRVTL 313
Query: 922 NNFLNWHHSNLRKMKTHDHAQLLSGISFKNGIAGMAAXXXXXXXXXXXVIEAKRKNRVSL 1101
NF +W L HD A ++ G G AG A +E+ V L
Sbjct: 314 RNFNSWRQEKLFHRVEHDVAHMIVG-HHPEGDAGQAFLNGACSGGFATAVESFHHEDVLL 372
Query: 1102 -VXLMSHELGHVLGM 1143
LM HELGH LG+
Sbjct: 373 FAALMVHELGHNLGI 387
>ref|XP_849543.1| PREDICTED: similar to a disintegrin and metalloproteinase domain 20
preproprotein [Canis familiaris].
Length = 732
Score = 116 bits (290), Expect = 5e-26
Identities = 83/315 (26%), Positives = 144/315 (45%), Gaps = 7/315 (2%)
Frame = +1
Query: 286 LQYQIILNGEEVILSLRKTEHLLGPDYTETYYSPRGEEITKSPQIMEHCYYKGHILNERD 465
L Y + G+ + ++ + LL ++ Y+ +G + P I CYY GH+ + D
Sbjct: 69 LSYCLHFGGQRHVFHIKVKKLLLSKNFPVFTYTDQGALLEDQPFIRRDCYYHGHVEGDPD 128
Query: 466 SVASISTC-DGLRGYFTHHDQRYMIKPLNSTDQEEHAVLTHNQEELDPTNLTCGVRN--V 636
S+ S+STC G +G + Y I P + EH V EE + CG+ + +
Sbjct: 129 SLVSLSTCFGGFQGILQINHILYEILPKRLSTTFEHLVYKMYSEEKQFPPMRCGLTDEKI 188
Query: 637 GRKQGHVRTSRS-LKNPEKEDFLQAEKYIDLFLVLDRAFYNMHNGNITSIRSFVFDVINL 813
R +S S L E E ++Y+++ +V+D Y N+T+++ V +N
Sbjct: 189 ARHVKFQESSNSTLVQSEYEGLWMHKRYVEMAVVVDYNRYAYREYNVTTVQLEVITTMNN 248
Query: 814 LNVIYNTIDIQVTLVGMEIWSDGDKIKVVPETSVTFNNFLNWHHSNLRKMKTHDHAQLLS 993
+N Y +++ V+LVGME+W++G+ ++ + V + F W HD A +
Sbjct: 249 VNTFYQPLNVDVSLVGMEVWNEGNPVE-IENMDVLVDLFCAWKKKGFNARVPHDAAHVF- 306
Query: 994 GISFKNGIAGMAAXXXXXXXXXXXVIEAKRKNRVS-LVXLMSHELGHVLGMPDVPYDTKC 1170
+ + GI G++ ++A + + ++SHELGH LGM KC
Sbjct: 307 -VKRRYGILGISYVGSICNYNTNCAVDAFTSDNLGFFAFVVSHELGHSLGMWHDEETCKC 365
Query: 1171 SSGGVC--MKSYLSS 1209
+ VC +K YL S
Sbjct: 366 AD-NVCIMIKMYLPS 379
>ref|XP_537500.2| PREDICTED: similar to a disintegrin and metalloproteinase domain 21
preproprotein [Canis familiaris].
Length = 1476
Score = 108 bits (269), Expect = 1e-23
Identities = 75/310 (24%), Positives = 140/310 (45%), Gaps = 6/310 (1%)
Frame = +1
Query: 259 GKEERYEPELQYQIILNGEEVILSLRKTEHLLGPDYTETYYSPRGEEITKSPQIMEHCYY 438
G+ + L Y + G+ I+ +R + LL + Y+ + + P + + CYY
Sbjct: 88 GRSAKSPGWLSYSLKFGGQRHIVHMRVKKFLLSKHFPVFTYTDQHALLQDQPFVPDDCYY 147
Query: 439 KGHILNERDSVASISTCDG-LRGYFTHHDQRYMIKPLNSTDQEEHAVLTHNQEELDPTNL 615
G++ +S+ ++STC G RG +D Y I+P++ + EH V + + +
Sbjct: 148 HGYVEGISESLVALSTCSGGFRGMLQINDLAYEIEPISFSATFEHLVYKIDSGDTQFPPM 207
Query: 616 TCGV--RNVGRK-QGHVRTSRSLKNPEKEDFLQAEKYIDLFLVLDRAFYNMHNGNITSIR 786
CG+ + R Q + +L + ++++L +V+D Y N++ ++
Sbjct: 208 RCGLTEEEIARHLQLRASYNSTLMQNSYLGWWTHLRFVELVVVVDHFRYLYCKSNVSLVQ 267
Query: 787 SFVFDVINLLNVIYNTIDIQVTLVGMEIWSDGDKIKVVPETSVTFNNFLNWHHSNLRKMK 966
VFD +N++ ++Y+ +++++ L G+EIWS+ + I + +F W SNL
Sbjct: 268 REVFDTVNIIGILYSPLEVEIVLNGIEIWSERNLISTDTIEQI-LGDFSAWKFSNLDDRL 326
Query: 967 THDHAQLL--SGISFKNGIAGMAAXXXXXXXXXXXVIEAKRKNRVSLVXLMSHELGHVLG 1140
HD A L K G+A + V E R +L ++HELGH +G
Sbjct: 327 PHDTAHLFIKKNFGIKLGVAYVGGICHRLFNSGVDVFEEDRLYLFALT--VTHELGHNMG 384
Query: 1141 MPDVPYDTKC 1170
M + KC
Sbjct: 385 MTHDTKECKC 394
Score = 98.2 bits (243), Expect = 1e-20
Identities = 76/322 (23%), Positives = 142/322 (44%), Gaps = 9/322 (2%)
Frame = +1
Query: 259 GKEERYEPELQYQIILNGEEVILSLRKTEHLLGPDYTETYYSPRGEEITKSPQIMEHCYY 438
G+ + L Y + G+ I+ +R + L+ + Y+ + + P + + CYY
Sbjct: 808 GRSAKSPGWLSYSLKFGGQRHIVHMRVKKLLVSKHFPVFTYTDQHALLQDQPFVPDDCYY 867
Query: 439 KGHILNERDSVASISTCDG-LRGYFTHHDQRYMIKPLNSTDQEEHAVLTHNQEELDPTNL 615
G++ +S+ ++STC G RG +D Y I+P+ + + EH V N E +
Sbjct: 868 HGYVEGISESLVALSTCSGGFRGMLQINDLAYEIEPIRHSTKFEHLVYEINTNETQFPTM 927
Query: 616 TCGV--RNVGRKQGHVRTSR--SLKNPEKEDFLQAEKYIDLFLVLDRAFYNMHNGNITSI 783
CG+ + + +Q + +LK + +++L +V+D F N + +
Sbjct: 928 RCGLTKKEIALQQVKFEEVKKSTLKQNSNDKLWTHSWFLELVVVVDHNFLIYSQSNFSMV 987
Query: 784 RSFVFDVINLLNVIYNTIDIQVTLVGMEIWSDGDKIKVVPETSVTFNNFLNWHHSNLRKM 963
+ VF V+N+++ IY + V L+G+EIW+ G+ ++ V +F W +L ++
Sbjct: 988 QEDVFLVVNIVDSIYQQLGTYVILIGIEIWNQGNVFPMISIEQV-LEDFSKWKQISLSQL 1046
Query: 964 KTHDHAQLLSGISFKN---GIAGMAAXXXXXXXXXXXVIEAKRKNRVSLVXL-MSHELGH 1131
+ +D A KN + G+A + + + SL L ++HELGH
Sbjct: 1047 Q-YDAAHFF----IKNPLISVLGIAYVAGICRPPIDCGVNNFQGDSWSLFALTVAHELGH 1101
Query: 1132 VLGMPDVPYDTKCSSGGVCMKS 1197
LGM C G M +
Sbjct: 1102 TLGMWHDEEFCLCEQSGCIMNA 1123
>ref|XP_859842.1| PREDICTED: similar to a disintegrin and metalloproteinase domain 22
isoform 1 preproprotein isoform 6 [Canis familiaris].
Length = 909
Score = 97.4 bits (241), Expect = 2e-20
Identities = 68/269 (25%), Positives = 120/269 (44%), Gaps = 12/269 (4%)
Frame = +1
Query: 259 GKEERYEPELQYQIILNGEEVILSLRKTEHLLGPDYTETYYSPRGEEITKSPQIMEHCYY 438
G + + + +Q+ G IL + LL +Y E + G+ + EHCYY
Sbjct: 83 GGQLTHVDQASFQVDAFGTSFILDIMLNHDLLSSEYIERHVEHGGKTVEVKGG--EHCYY 140
Query: 439 KGHILNERDSVASISTCDGLRGYFTHHDQRYMIKP-LNSTDQEE---HAVLTHNQEELDP 606
+GH+ DS ++STC GL G F + Y+I+P N T QE+ H+V E
Sbjct: 141 QGHVRGNPDSFVALSTCHGLHGMFYDGNHTYLIEPEENDTSQEDFHFHSVYKSRLFEFPL 200
Query: 607 TNLTCGVRNV-------GRKQGHVRTSRSLKNPEKEDFLQAEKYIDLFLVLDRAFYNMHN 765
+L + V K R+ R L+ + + KYI+L +V D + H
Sbjct: 201 DDLPSEFQQVHITPPKFTLKPRPKRSKRQLRR-HPRNVEEETKYIELMIVNDHLMFKKHR 259
Query: 766 GNITSIRSFVFDVINLLNVIY-NTIDIQVTLVGMEIWSDGDKIKVVPETSVTFNNFLNWH 942
++ ++ V+N+ ++IY + + ++ LV ME W+ +K + +T F+ +
Sbjct: 260 LSVVHTNTYAKSVVNMADLIYKDQLKTRIVLVAMETWAADNKFAISENPLITLREFMKYR 319
Query: 943 HSNLRKMKTHDHAQLLSGISFKNGIAGMA 1029
+++ D L SG F++ +G A
Sbjct: 320 RDFIKEKS--DAVHLFSGSQFESSRSGAA 346
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 45,000,151
Number of extensions: 1085071
Number of successful extensions: 2845
Number of sequences better than 1.0e-05: 48
Number of HSP's gapped: 2774
Number of HSP's successfully gapped: 49
Length of query: 405
Length of database: 18,874,504
Length adjustment: 105
Effective length of query: 300
Effective length of database: 15,374,224
Effective search space: 4612267200
Effective search space used: 4612267200
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002517
(1215 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_055294.1| ADAM DEC1 isoform 1 [Homo sapiens]. 549 e-156
Alignment gi|NP_001138744.1| ADAM DEC1 isoform 2 [Homo sapiens]. 456 e-128
Alignment gi|NP_001138743.1| ADAM DEC1 isoform 2 [Homo sapiens]. 456 e-128
Alignment gi|NP_068547.2| disintegrin and metalloproteinase domain-contai... 269 4e-72
Alignment gi|NP_055080.2| disintegrin and metalloproteinase domain-contai... 269 4e-72
Alignment gi|NP_003808.2| disintegrin and metalloproteinase domain-contai... 218 1e-56
Alignment gi|NP_001157961.1| disintegrin and metalloproteinase domain-con... 178 8e-45
Alignment gi|NP_001100.3| disintegrin and metalloproteinase domain-contai... 178 8e-45
Alignment gi|NP_067673.2| disintegrin and metalloproteinase domain-contai... 151 1e-36
Alignment gi|NP_003465.3| disintegrin and metalloproteinase domain-contai... 151 1e-36
>ref|NP_055294.1| ADAM DEC1 isoform 1 [Homo sapiens].
Length = 470
Score = 549 bits (1414), Expect = e-156
Identities = 272/380 (71%), Positives = 308/380 (81%)
Frame = +1
Query: 76 SQLPAVTSMAXXXXXXXXXIVQPQAIAMKEMPESETYEVVLPKKLHILHKRETQNNQTEK 255
SQLPAV +M+ IVQ QAIA+K+ PE +E+V PKKLHILHKRE +NNQTEK
Sbjct: 6 SQLPAVATMSWVLLPVLWLIVQTQAIAIKQTPELTLHEIVCPKKLHILHKREIKNNQTEK 65
Query: 256 PGKEERYEPELQYQIILNGEEVILSLRKTEHLLGPDYTETYYSPRGEEITKSPQIMEHCY 435
GKEERYEPE+QYQ+ILNGEE+ILSL+KT+HLLGPDYTET YSPRGEEIT P+ MEHCY
Sbjct: 66 HGKEERYEPEVQYQMILNGEEIILSLQKTKHLLGPDYTETLYSPRGEEITTKPENMEHCY 125
Query: 436 YKGHILNERDSVASISTCDGLRGYFTHHDQRYMIKPLNSTDQEEHAVLTHNQEELDPTNL 615
YKG+ILNE++SVASISTCDGLRGYFTHH QRY IKPL STD++EHAV T NQEE DP N
Sbjct: 126 YKGNILNEKNSVASISTCDGLRGYFTHHHQRYQIKPLKSTDEKEHAVFTSNQEEQDPANH 185
Query: 616 TCGVRNVGRKQGHVRTSRSLKNPEKEDFLQAEKYIDLFLVLDRAFYNMHNGNITSIRSFV 795
TCGV++ KQG +R SRSLK+PEKEDFL+A+KYIDL+LVLD AFY +N N+T IRSFV
Sbjct: 186 TCGVKSTDGKQGPIRISRSLKSPEKEDFLRAQKYIDLYLVLDNAFYKNYNENLTLIRSFV 245
Query: 796 FDVINLLNVIYNTIDIQVTLVGMEIWSDGDKIKVVPETSVTFNNFLNWHHSNLRKMKTHD 975
FDV+NLLNVIYNTID+QV LVGMEIWSDGDKIKVVP S TF+NFL WH SNL K K HD
Sbjct: 246 FDVMNLLNVIYNTIDVQVALVGMEIWSDGDKIKVVPSASTTFDNFLRWHSSNLGK-KIHD 304
Query: 976 HAQLLSGISFKNGIAGMAAXXXXXXXXXXXVIEAKRKNRVSLVXLMSHELGHVLGMPDVP 1155
HAQLLSGISF N G+AA VIEAK+KN V+LV +MSHELGHVLGMPDVP
Sbjct: 305 HAQLLSGISFNNRRVGLAASNSLCSPSSVAVIEAKKKNNVALVGVMSHELGHVLGMPDVP 364
Query: 1156 YDTKCSSGGVCMKSYLSSKF 1215
++TKC SG M YLSSKF
Sbjct: 365 FNTKCPSGSCVMNQYLSSKF 384
>ref|NP_001138744.1| ADAM DEC1 isoform 2 [Homo sapiens].
Length = 391
Score = 456 bits (1173), Expect = e-128
Identities = 224/306 (73%), Positives = 252/306 (82%)
Frame = +1
Query: 298 IILNGEEVILSLRKTEHLLGPDYTETYYSPRGEEITKSPQIMEHCYYKGHILNERDSVAS 477
+ILNGEE+ILSL+KT+HLLGPDYTET YSPRGEEIT P+ MEHCYYKG+ILNE++SVAS
Sbjct: 1 MILNGEEIILSLQKTKHLLGPDYTETLYSPRGEEITTKPENMEHCYYKGNILNEKNSVAS 60
Query: 478 ISTCDGLRGYFTHHDQRYMIKPLNSTDQEEHAVLTHNQEELDPTNLTCGVRNVGRKQGHV 657
ISTCDGLRGYFTHH QRY IKPL STD++EHAV T NQEE DP N TCGV++ KQG +
Sbjct: 61 ISTCDGLRGYFTHHHQRYQIKPLKSTDEKEHAVFTSNQEEQDPANHTCGVKSTDGKQGPI 120
Query: 658 RTSRSLKNPEKEDFLQAEKYIDLFLVLDRAFYNMHNGNITSIRSFVFDVINLLNVIYNTI 837
R SRSLK+PEKEDFL+A+KYIDL+LVLD AFY +N N+T IRSFVFDV+NLLNVIYNTI
Sbjct: 121 RISRSLKSPEKEDFLRAQKYIDLYLVLDNAFYKNYNENLTLIRSFVFDVMNLLNVIYNTI 180
Query: 838 DIQVTLVGMEIWSDGDKIKVVPETSVTFNNFLNWHHSNLRKMKTHDHAQLLSGISFKNGI 1017
D+QV LVGMEIWSDGDKIKVVP S TF+NFL WH SNL K K HDHAQLLSGISF N
Sbjct: 181 DVQVALVGMEIWSDGDKIKVVPSASTTFDNFLRWHSSNLGK-KIHDHAQLLSGISFNNRR 239
Query: 1018 AGMAAXXXXXXXXXXXVIEAKRKNRVSLVXLMSHELGHVLGMPDVPYDTKCSSGGVCMKS 1197
G+AA VIEAK+KN V+LV +MSHELGHVLGMPDVP++TKC SG M
Sbjct: 240 VGLAASNSLCSPSSVAVIEAKKKNNVALVGVMSHELGHVLGMPDVPFNTKCPSGSCVMNQ 299
Query: 1198 YLSSKF 1215
YLSSKF
Sbjct: 300 YLSSKF 305
>ref|NP_001138743.1| ADAM DEC1 isoform 2 [Homo sapiens].
Length = 391
Score = 456 bits (1173), Expect = e-128
Identities = 224/306 (73%), Positives = 252/306 (82%)
Frame = +1
Query: 298 IILNGEEVILSLRKTEHLLGPDYTETYYSPRGEEITKSPQIMEHCYYKGHILNERDSVAS 477
+ILNGEE+ILSL+KT+HLLGPDYTET YSPRGEEIT P+ MEHCYYKG+ILNE++SVAS
Sbjct: 1 MILNGEEIILSLQKTKHLLGPDYTETLYSPRGEEITTKPENMEHCYYKGNILNEKNSVAS 60
Query: 478 ISTCDGLRGYFTHHDQRYMIKPLNSTDQEEHAVLTHNQEELDPTNLTCGVRNVGRKQGHV 657
ISTCDGLRGYFTHH QRY IKPL STD++EHAV T NQEE DP N TCGV++ KQG +
Sbjct: 61 ISTCDGLRGYFTHHHQRYQIKPLKSTDEKEHAVFTSNQEEQDPANHTCGVKSTDGKQGPI 120
Query: 658 RTSRSLKNPEKEDFLQAEKYIDLFLVLDRAFYNMHNGNITSIRSFVFDVINLLNVIYNTI 837
R SRSLK+PEKEDFL+A+KYIDL+LVLD AFY +N N+T IRSFVFDV+NLLNVIYNTI
Sbjct: 121 RISRSLKSPEKEDFLRAQKYIDLYLVLDNAFYKNYNENLTLIRSFVFDVMNLLNVIYNTI 180
Query: 838 DIQVTLVGMEIWSDGDKIKVVPETSVTFNNFLNWHHSNLRKMKTHDHAQLLSGISFKNGI 1017
D+QV LVGMEIWSDGDKIKVVP S TF+NFL WH SNL K K HDHAQLLSGISF N
Sbjct: 181 DVQVALVGMEIWSDGDKIKVVPSASTTFDNFLRWHSSNLGK-KIHDHAQLLSGISFNNRR 239
Query: 1018 AGMAAXXXXXXXXXXXVIEAKRKNRVSLVXLMSHELGHVLGMPDVPYDTKCSSGGVCMKS 1197
G+AA VIEAK+KN V+LV +MSHELGHVLGMPDVP++TKC SG M
Sbjct: 240 VGLAASNSLCSPSSVAVIEAKKKNNVALVGVMSHELGHVLGMPDVPFNTKCPSGSCVMNQ 299
Query: 1198 YLSSKF 1215
YLSSKF
Sbjct: 300 YLSSKF 305
>ref|NP_068547.2| disintegrin and metalloproteinase domain-containing protein 28
isoform 3 preproprotein [Homo sapiens].
Length = 540
Score = 269 bits (687), Expect = 4e-72
Identities = 148/357 (41%), Positives = 209/357 (58%), Gaps = 6/357 (1%)
Frame = +1
Query: 154 AMKEMPESETYEVVLPKKLHILHKRETQNNQTEKPGKEERYEPELQYQIILNGEEVILSL 333
A+KE+P + YEVV P +LH LHKRE + +P ++E++E EL+Y++ +NG+ +L L
Sbjct: 18 AIKELPGVKKYEVVYPIRLHPLHKREAK-----EPEQQEQFETELKYKMTINGKIAVLYL 72
Query: 334 RKTEHLLGPDYTETYYSPRGEEITKSPQIMEHCYYKGHILNERDSVASISTCDGLRGYFT 513
+K ++LL P YTETYY+ G+EIT SPQIM+ CYY+GHILNE+ S ASISTC GLRGYF+
Sbjct: 73 KKNKNLLAPGYTETYYNSTGKEITTSPQIMDDCYYQGHILNEKVSDASISTCRGLRGYFS 132
Query: 514 HHDQRYMIKPLN--STDQEEHAVLTHNQEELDPTNLTCGVRNV----GRKQGHVRTSRSL 675
DQRY I+PL+ D +EHA+ +N +E + + TCG+ V +Q + L
Sbjct: 133 QGDQRYFIEPLSPIHRDGQEHALFKYNPDEKN-YDSTCGMDGVLWAHDLQQNIALPATKL 191
Query: 676 KNPEKEDFLQAEKYIDLFLVLDRAFYNMHNGNITSIRSFVFDVINLLNVIYNTIDIQVTL 855
+ + EKYI+ +LVLD + +N N IR VF++ N +N++Y ++ V L
Sbjct: 192 VKLKDRKVQEHEKYIEYYLVLDNGEFKRYNENQDEIRKRVFEMANYVNMLYKKLNTHVAL 251
Query: 856 VGMEIWSDGDKIKVVPETSVTFNNFLNWHHSNLRKMKTHDHAQLLSGISFKNGIAGMAAX 1035
VGMEIW+D DKIK+ P S T NF W S L + K HD AQL++ G+A
Sbjct: 252 VGMEIWTDKDKIKITPNASFTLENFSKWRGSVLSRRKRHDIAQLITATELAGTTVGLAFM 311
Query: 1036 XXXXXXXXXXVIEAKRKNRVSLVXLMSHELGHVLGMPDVPYDTKCSSGGVCMKSYLS 1206
V++ N + + M+HE+GH GM Y KC S M LS
Sbjct: 312 STMCSPYSVGVVQDHSDNLLRVAGTMAHEMGHNFGMFHDDYSCKCPSTICVMDKALS 368
>ref|NP_055080.2| disintegrin and metalloproteinase domain-containing protein 28
isoform 1 preproprotein [Homo sapiens].
Length = 775
Score = 269 bits (687), Expect = 4e-72
Identities = 148/357 (41%), Positives = 209/357 (58%), Gaps = 6/357 (1%)
Frame = +1
Query: 154 AMKEMPESETYEVVLPKKLHILHKRETQNNQTEKPGKEERYEPELQYQIILNGEEVILSL 333
A+KE+P + YEVV P +LH LHKRE + +P ++E++E EL+Y++ +NG+ +L L
Sbjct: 18 AIKELPGVKKYEVVYPIRLHPLHKREAK-----EPEQQEQFETELKYKMTINGKIAVLYL 72
Query: 334 RKTEHLLGPDYTETYYSPRGEEITKSPQIMEHCYYKGHILNERDSVASISTCDGLRGYFT 513
+K ++LL P YTETYY+ G+EIT SPQIM+ CYY+GHILNE+ S ASISTC GLRGYF+
Sbjct: 73 KKNKNLLAPGYTETYYNSTGKEITTSPQIMDDCYYQGHILNEKVSDASISTCRGLRGYFS 132
Query: 514 HHDQRYMIKPLN--STDQEEHAVLTHNQEELDPTNLTCGVRNV----GRKQGHVRTSRSL 675
DQRY I+PL+ D +EHA+ +N +E + + TCG+ V +Q + L
Sbjct: 133 QGDQRYFIEPLSPIHRDGQEHALFKYNPDEKN-YDSTCGMDGVLWAHDLQQNIALPATKL 191
Query: 676 KNPEKEDFLQAEKYIDLFLVLDRAFYNMHNGNITSIRSFVFDVINLLNVIYNTIDIQVTL 855
+ + EKYI+ +LVLD + +N N IR VF++ N +N++Y ++ V L
Sbjct: 192 VKLKDRKVQEHEKYIEYYLVLDNGEFKRYNENQDEIRKRVFEMANYVNMLYKKLNTHVAL 251
Query: 856 VGMEIWSDGDKIKVVPETSVTFNNFLNWHHSNLRKMKTHDHAQLLSGISFKNGIAGMAAX 1035
VGMEIW+D DKIK+ P S T NF W S L + K HD AQL++ G+A
Sbjct: 252 VGMEIWTDKDKIKITPNASFTLENFSKWRGSVLSRRKRHDIAQLITATELAGTTVGLAFM 311
Query: 1036 XXXXXXXXXXVIEAKRKNRVSLVXLMSHELGHVLGMPDVPYDTKCSSGGVCMKSYLS 1206
V++ N + + M+HE+GH GM Y KC S M LS
Sbjct: 312 STMCSPYSVGVVQDHSDNLLRVAGTMAHEMGHNFGMFHDDYSCKCPSTICVMDKALS 368
>ref|NP_003808.2| disintegrin and metalloproteinase domain-containing protein 7
precursor [Homo sapiens].
Length = 754
Score = 218 bits (554), Expect = 1e-56
Identities = 123/341 (36%), Positives = 188/341 (55%), Gaps = 1/341 (0%)
Frame = +1
Query: 178 ETYEVVLPKKLHILHKRETQNNQTEKPGKEERYEPELQYQIILNGEEVILSLRKTEHLLG 357
E ++V PKKL ++ KR+T + + K YE EL Y+I LN + ++L L ++ LG
Sbjct: 25 EGQQLVRPKKLPLIQKRDTGHTHDDDILKT--YEEELLYEIKLNRKTLVLHLLRSREFLG 82
Query: 358 PDYTETYYSPRGEEITKSPQIMEHCYYKGHILNERDSVASISTCDGLRGYFTHHDQRYMI 537
+Y+ET+YS +GE T+ PQIM+HC+Y+G I++E DS ASISTC+GLRG+F +DQRY+I
Sbjct: 83 SNYSETFYSMKGEAFTRHPQIMDHCFYQGSIVHEYDSAASISTCNGLRGFFRINDQRYLI 142
Query: 538 KPLNSTDQEEHAVLTHNQEELDPTNLTCGVRNVGRKQGHVRTSRSLKNPEKEDFLQAEKY 717
+P+ +D+ EH V +N N +C N RK V + K + EKY
Sbjct: 143 EPVKYSDEGEHLVFKYNLRVPYGANYSCTELNFTRKT--VPGDNESEEDSKIKGIHDEKY 200
Query: 718 IDLFLVLDRAFYNMHNGNITSIRSFVFDVINLLNVIYNTIDIQVTLVGMEIWSDGDKIKV 897
++LF+V D Y + +R+ ++ ++N +N+IY T++I VTLVG+EIW+ DKI++
Sbjct: 201 VELFIVADDTVYRRNGHPHNKLRNRIWGMVNFVNMIYKTLNIHVTLVGIEIWTHEDKIEL 260
Query: 898 VPETSVTFNNFLNWHHSNLRKMKTHDHAQLLSGISFKNGIAGMA-AXXXXXXXXXXXVIE 1074
T F W L+ K DH LLSG + + G++ +I+
Sbjct: 261 YSNIETTLLRFSFWQEKILKTRKDFDHVVLLSGKWLYSHVQGISYPGGMCLPYYSTSIIK 320
Query: 1075 AKRKNRVSLVXLMSHELGHVLGMPDVPYDTKCSSGGVCMKS 1197
+ + M+H+LGH LGM + C SG M S
Sbjct: 321 DLLPDTNIIANRMAHQLGHNLGMQHDEFPCTCPSGKCVMDS 361
>ref|NP_001157961.1| disintegrin and metalloproteinase domain-containing protein 8 isoform
2 precursor [Homo sapiens].
Length = 742
Score = 178 bits (452), Expect = 8e-45
Identities = 109/325 (33%), Positives = 165/325 (50%), Gaps = 3/325 (0%)
Frame = +1
Query: 178 ETYEVVLPKKLHILHKRETQNNQTEKPGKEERYEPELQYQIILNGEEVILSLRKTEHLLG 357
E YEVVLP +L R P + + Y + G L LRK LLG
Sbjct: 27 EQYEVVLPWRLPGPRVRRAL------PSHLGLHPERVSYVLGATGHNFTLHLRKNRDLLG 80
Query: 358 PDYTETYYSPRGEEITKSPQIMEHCYYKGHILNERDSVASISTCDGLRGYFTHHDQRYMI 537
YTETY + G E+T+ P+ +HC+Y+GH+ DS AS+STC GLRG+F ++I
Sbjct: 81 SGYTETYTAANGSEVTEQPRGQDHCFYQGHVEGYPDSAASLSTCAGLRGFFQVGSDLHLI 140
Query: 538 KPLNSTDQE-EHAVLTHNQEELDPTNLTCGVRNVGRKQGHVRTSRSLKNPEKEDFLQAE- 711
+PL+ + HAV + E L T TCGV + + ++ P D L +
Sbjct: 141 EPLDEGGEGGRHAV--YQAEHLLQTAGTCGVSDDSLGSLLGPRTAAVFRPRPGDSLPSRE 198
Query: 712 -KYIDLFLVLDRAFYNMHNGNITSIRSFVFDVINLLNVIYNTIDIQVTLVGMEIWSDGDK 888
+Y++L++V+D A + M G+ ++R V +V+N ++ +Y ++ +V LVG+EIW+ D+
Sbjct: 199 TRYVELYVVVDNAEFQML-GSEAAVRHRVLEVVNHVDKLYQKLNFRVVLVGLEIWNSQDR 257
Query: 889 IKVVPETSVTFNNFLNWHHSNLRKMKTHDHAQLLSGISFKNGIAGMAAXXXXXXXXXXXV 1068
V P+ SVT N L W + HD+ QL++G+ F G A V
Sbjct: 258 FHVSPDPSVTLENLLTWQARQRTRRHLHDNVQLITGVDFTGTTVGFARVSAMCSHSSGAV 317
Query: 1069 IEAKRKNRVSLVXLMSHELGHVLGM 1143
+ KN V + M+HE+GH LGM
Sbjct: 318 NQDHSKNPVGVACTMAHEMGHNLGM 342
>ref|NP_001100.3| disintegrin and metalloproteinase domain-containing protein 8 isoform
1 precursor [Homo sapiens].
Length = 824
Score = 178 bits (452), Expect = 8e-45
Identities = 109/325 (33%), Positives = 165/325 (50%), Gaps = 3/325 (0%)
Frame = +1
Query: 178 ETYEVVLPKKLHILHKRETQNNQTEKPGKEERYEPELQYQIILNGEEVILSLRKTEHLLG 357
E YEVVLP +L R P + + Y + G L LRK LLG
Sbjct: 27 EQYEVVLPWRLPGPRVRRAL------PSHLGLHPERVSYVLGATGHNFTLHLRKNRDLLG 80
Query: 358 PDYTETYYSPRGEEITKSPQIMEHCYYKGHILNERDSVASISTCDGLRGYFTHHDQRYMI 537
YTETY + G E+T+ P+ +HC+Y+GH+ DS AS+STC GLRG+F ++I
Sbjct: 81 SGYTETYTAANGSEVTEQPRGQDHCFYQGHVEGYPDSAASLSTCAGLRGFFQVGSDLHLI 140
Query: 538 KPLNSTDQE-EHAVLTHNQEELDPTNLTCGVRNVGRKQGHVRTSRSLKNPEKEDFLQAE- 711
+PL+ + HAV + E L T TCGV + + ++ P D L +
Sbjct: 141 EPLDEGGEGGRHAV--YQAEHLLQTAGTCGVSDDSLGSLLGPRTAAVFRPRPGDSLPSRE 198
Query: 712 -KYIDLFLVLDRAFYNMHNGNITSIRSFVFDVINLLNVIYNTIDIQVTLVGMEIWSDGDK 888
+Y++L++V+D A + M G+ ++R V +V+N ++ +Y ++ +V LVG+EIW+ D+
Sbjct: 199 TRYVELYVVVDNAEFQML-GSEAAVRHRVLEVVNHVDKLYQKLNFRVVLVGLEIWNSQDR 257
Query: 889 IKVVPETSVTFNNFLNWHHSNLRKMKTHDHAQLLSGISFKNGIAGMAAXXXXXXXXXXXV 1068
V P+ SVT N L W + HD+ QL++G+ F G A V
Sbjct: 258 FHVSPDPSVTLENLLTWQARQRTRRHLHDNVQLITGVDFTGTTVGFARVSAMCSHSSGAV 317
Query: 1069 IEAKRKNRVSLVXLMSHELGHVLGM 1143
+ KN V + M+HE+GH LGM
Sbjct: 318 NQDHSKNPVGVACTMAHEMGHNLGM 342
>ref|NP_067673.2| disintegrin and metalloproteinase domain-containing protein 12
isoform 2 preproprotein [Homo sapiens].
Length = 738
Score = 151 bits (381), Expect = 1e-36
Identities = 86/312 (27%), Positives = 153/312 (49%), Gaps = 9/312 (2%)
Frame = +1
Query: 265 EERYEPE-LQYQIILNGEEVILSLRKTEHLLGPDYTETYYSPRGEEITKSPQ---IMEHC 432
+ + PE L ++ +E+I++L + E L+ +TET+Y G +++ + I+ HC
Sbjct: 60 DSKNHPEVLNIRLQRESKELIINLERNEGLIASSFTETHYLQDGTDVSLARNYTVILGHC 119
Query: 433 YYKGHILNERDSVASISTCDGLRGYFTHHDQRYMIKPLNSTDQEEHAVLTHNQEELDPTN 612
YY GH+ DS S+STC GLRG ++ Y+++P+ S ++L
Sbjct: 120 YYHGHVRGYSDSAVSLSTCSGLRGLIVFENESYVLEPMKSATNRYKLFPA---KKLKSVR 176
Query: 613 LTCGVR----NVGRKQGHVRTSRSLKNPEKEDFLQAEKYIDLFLVLDRAFYNMHNGNITS 780
+CG N+ K S++ K + L+A KY++L +V D + ++
Sbjct: 177 GSCGSHHNTPNLAAKNVFPPPSQTWARRHKRETLKATKYVELVIVADNREFQRQGKDLEK 236
Query: 781 IRSFVFDVINLLNVIYNTIDIQVTLVGMEIWSDGDKIKVVPETSVTFNNFLNWHHSNLRK 960
++ + ++ N ++ Y ++I++ LVG+E+W+D DK V + + + FL+W L
Sbjct: 237 VKQRLIEIANHVDKFYRPLNIRIVLVGVEVWNDMDKCSVSQDPFTSLHEFLDWRKMKLLP 296
Query: 961 MKTHDHAQLLSGISFKNGIAGMA-AXXXXXXXXXXXVIEAKRKNRVSLVXLMSHELGHVL 1137
K+HD+AQL+SG+ F+ GMA ++ N + ++HELGH
Sbjct: 297 RKSHDNAQLVSGVYFQGTTIGMAPIMSMCTADQSGGIVMDHSDNPLGAAVTLAHELGHNF 356
Query: 1138 GMPDVPYDTKCS 1173
GM D CS
Sbjct: 357 GMNHDTLDRGCS 368
>ref|NP_003465.3| disintegrin and metalloproteinase domain-containing protein 12
isoform 1 preproprotein [Homo sapiens].
Length = 909
Score = 151 bits (381), Expect = 1e-36
Identities = 86/312 (27%), Positives = 153/312 (49%), Gaps = 9/312 (2%)
Frame = +1
Query: 265 EERYEPE-LQYQIILNGEEVILSLRKTEHLLGPDYTETYYSPRGEEITKSPQ---IMEHC 432
+ + PE L ++ +E+I++L + E L+ +TET+Y G +++ + I+ HC
Sbjct: 60 DSKNHPEVLNIRLQRESKELIINLERNEGLIASSFTETHYLQDGTDVSLARNYTVILGHC 119
Query: 433 YYKGHILNERDSVASISTCDGLRGYFTHHDQRYMIKPLNSTDQEEHAVLTHNQEELDPTN 612
YY GH+ DS S+STC GLRG ++ Y+++P+ S ++L
Sbjct: 120 YYHGHVRGYSDSAVSLSTCSGLRGLIVFENESYVLEPMKSATNRYKLFPA---KKLKSVR 176
Query: 613 LTCGVR----NVGRKQGHVRTSRSLKNPEKEDFLQAEKYIDLFLVLDRAFYNMHNGNITS 780
+CG N+ K S++ K + L+A KY++L +V D + ++
Sbjct: 177 GSCGSHHNTPNLAAKNVFPPPSQTWARRHKRETLKATKYVELVIVADNREFQRQGKDLEK 236
Query: 781 IRSFVFDVINLLNVIYNTIDIQVTLVGMEIWSDGDKIKVVPETSVTFNNFLNWHHSNLRK 960
++ + ++ N ++ Y ++I++ LVG+E+W+D DK V + + + FL+W L
Sbjct: 237 VKQRLIEIANHVDKFYRPLNIRIVLVGVEVWNDMDKCSVSQDPFTSLHEFLDWRKMKLLP 296
Query: 961 MKTHDHAQLLSGISFKNGIAGMA-AXXXXXXXXXXXVIEAKRKNRVSLVXLMSHELGHVL 1137
K+HD+AQL+SG+ F+ GMA ++ N + ++HELGH
Sbjct: 297 RKSHDNAQLVSGVYFQGTTIGMAPIMSMCTADQSGGIVMDHSDNPLGAAVTLAHELGHNF 356
Query: 1138 GMPDVPYDTKCS 1173
GM D CS
Sbjct: 357 GMNHDTLDRGCS 368
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 44,425,921
Number of extensions: 1084977
Number of successful extensions: 2860
Number of sequences better than 1.0e-05: 52
Number of HSP's gapped: 2769
Number of HSP's successfully gapped: 53
Length of query: 405
Length of database: 18,297,164
Length adjustment: 105
Effective length of query: 300
Effective length of database: 14,835,944
Effective search space: 4450783200
Effective search space used: 4450783200
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002517
(1215 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_067450.1| ADAM DEC1 precursor [Mus musculus]. 447 e-125
Alignment gi|NP_899222.1| disintegrin and metalloproteinase domain-contai... 262 5e-70
Alignment gi|NP_034212.1| disintegrin and metalloproteinase domain-contai... 262 5e-70
Alignment gi|NP_001041640.1| disintegrin and metalloproteinase domain-con... 262 5e-70
Alignment gi|NP_031428.2| disintegrin and metalloproteinase domain-contai... 221 9e-58
Alignment gi|NP_031429.1| disintegrin and metalloproteinase domain-contai... 185 5e-47
Alignment gi|NP_031426.2| disintegrin and metalloproteinase domain-contai... 150 1e-36
Alignment gi|NP_033746.1| disintegrin and metalloproteinase domain-contai... 149 6e-36
Alignment gi|NP_031430.2| disintegrin and metalloproteinase domain-contai... 135 5e-32
Alignment gi|NP_001157001.1| disintegrin and metalloproteinase domain-con... 129 4e-30
>ref|NP_067450.1| ADAM DEC1 precursor [Mus musculus].
Length = 467
Score = 447 bits (1149), Expect = e-125
Identities = 227/381 (59%), Positives = 276/381 (72%)
Frame = +1
Query: 73 TSQLPAVTSMAXXXXXXXXXIVQPQAIAMKEMPESETYEVVLPKKLHILHKRETQNNQTE 252
TS+LP SM+ I+Q Q I PE + +E+V PKKL I KR +NNQTE
Sbjct: 5 TSRLPTEASMSWVLLSVLWLIIQIQVIDATLTPELKPHEIVRPKKLPISQKRGLENNQTE 64
Query: 253 KPGKEERYEPELQYQIILNGEEVILSLRKTEHLLGPDYTETYYSPRGEEITKSPQIMEHC 432
+ GKEE+Y PE+QYQIILNGEE++ L++T+HLLGPDYTET YSPRGEE T+ Q ++ C
Sbjct: 65 RYGKEEKYAPEVQYQIILNGEEIVFHLKRTKHLLGPDYTETSYSPRGEESTRHSQDVKPC 124
Query: 433 YYKGHILNERDSVASISTCDGLRGYFTHHDQRYMIKPLNSTDQEEHAVLTHNQEELDPTN 612
YY+GHI N R S+A ISTCDGLRGYFTH DQRY IKPL STD+ EHAVL ++ + D +
Sbjct: 125 YYEGHIQNARGSLARISTCDGLRGYFTHRDQRYQIKPLQSTDEGEHAVLPYSWKGQDTVH 184
Query: 613 LTCGVRNVGRKQGHVRTSRSLKNPEKEDFLQAEKYIDLFLVLDRAFYNMHNGNITSIRSF 792
+ V RK+ H+RTSRSLKNP ED LQ +KYI LFLVLD A+Y ++NGN+T +R+F
Sbjct: 185 DKDAEKQVVRKRSHLRTSRSLKNP-NEDLLQGQKYIGLFLVLDNAYYKLYNGNVTQMRTF 243
Query: 793 VFDVINLLNVIYNTIDIQVTLVGMEIWSDGDKIKVVPETSVTFNNFLNWHHSNLRKMKTH 972
+F V+NLLN+IY TI+IQV+LVGMEIWSD DKIKV P TF +F+ WH+SNL K + H
Sbjct: 244 LFKVLNLLNMIYKTINIQVSLVGMEIWSDQDKIKVEPNLGATFTHFMRWHYSNLGK-RIH 302
Query: 973 DHAQLLSGISFKNGIAGMAAXXXXXXXXXXXVIEAKRKNRVSLVXLMSHELGHVLGMPDV 1152
+HAQLLSG SF++G GMAA VIEAK+KN V+LV LMSHELGH LGM DV
Sbjct: 303 NHAQLLSGASFRHGRVGMAAGNSFCTTSSVSVIEAKKKNNVALVALMSHELGHALGMKDV 362
Query: 1153 PYDTKCSSGGVCMKSYLSSKF 1215
PY TKC SG M YLSSKF
Sbjct: 363 PYYTKCPSGSCVMNQYLSSKF 383
>ref|NP_899222.1| disintegrin and metalloproteinase domain-containing protein 28
isoform 2 [Mus musculus].
Length = 768
Score = 262 bits (669), Expect = 5e-70
Identities = 140/357 (39%), Positives = 206/357 (57%), Gaps = 7/357 (1%)
Frame = +1
Query: 154 AMKEMPESETYEVVLPKKLHILHKRETQNNQTEKPGKEERYEPELQYQIILNGEEVILSL 333
A+KE+P+++ YEVV P +LH L KRETQ +P +E +E EL+Y++ +NG+ +L L
Sbjct: 20 AIKELPKAKKYEVVYPIRLHPLRKRETQ-----EPEPKETFETELRYKMTVNGKVAVLYL 74
Query: 334 RKTEHLLGPDYTETYYSPRGEEITKSPQIMEHCYYKGHILNERDSVASISTCDGLRGYFT 513
+K LL PDY+ETYY+ G ++T SPQIM+ CYY+GHI+NE+ S ASISTC GLRGY +
Sbjct: 75 KKNNKLLAPDYSETYYNSSGNKVTTSPQIMDSCYYQGHIVNEKVSAASISTCQGLRGYIS 134
Query: 514 HHDQRYMIKPLNS--TDQEEHAVLTHNQEELDPTNLTCGVRNV----GRKQGHVRTSRSL 675
D++Y I+PL+S D++ HA+ + E D CGV + G Q + L
Sbjct: 135 QGDEKYFIEPLSSENLDEQAHALFKDDSNE-DQEKSNCGVDDALWLQGLHQDVALPATRL 193
Query: 676 KNPEKEDFLQAEKYIDLFLVLDRAFYNMHNGNITSIRSFVFDVINLLNVIYNTIDIQVTL 855
+ +KYI+ ++VLD + +N N+ IR V ++ N +N++YN +D V L
Sbjct: 194 IKLNDGMVQEPKKYIEYYVVLDNGEFKKYNKNLAEIRKIVLEMANYINMLYNKLDAHVAL 253
Query: 856 VGMEIWSDGDKIKVVPETSVTFNNFLNWHHSNLRKMKTHDHAQLLSGISFKNGIAGMA-A 1032
VG+EIW+DGDKIK+ P+ + T NF W ++L K K HD AQL+S F G+A
Sbjct: 254 VGVEIWTDGDKIKITPDANTTLENFSKWRGNDLLKRKHHDIAQLISSTDFSGSTVGLAFM 313
Query: 1033 XXXXXXXXXXXVIEAKRKNRVSLVXLMSHELGHVLGMPDVPYDTKCSSGGVCMKSYL 1203
+++ + + M+HE+GH LGM KC S M+ L
Sbjct: 314 SSMCSPYHSVGIVQDHSNYHLRVAGTMAHEMGHNLGMIHDYLSCKCPSEVCVMEQSL 370
>ref|NP_034212.1| disintegrin and metalloproteinase domain-containing protein 28
isoform 1 [Mus musculus].
Length = 793
Score = 262 bits (669), Expect = 5e-70
Identities = 140/357 (39%), Positives = 206/357 (57%), Gaps = 7/357 (1%)
Frame = +1
Query: 154 AMKEMPESETYEVVLPKKLHILHKRETQNNQTEKPGKEERYEPELQYQIILNGEEVILSL 333
A+KE+P+++ YEVV P +LH L KRETQ +P +E +E EL+Y++ +NG+ +L L
Sbjct: 20 AIKELPKAKKYEVVYPIRLHPLRKRETQ-----EPEPKETFETELRYKMTVNGKVAVLYL 74
Query: 334 RKTEHLLGPDYTETYYSPRGEEITKSPQIMEHCYYKGHILNERDSVASISTCDGLRGYFT 513
+K LL PDY+ETYY+ G ++T SPQIM+ CYY+GHI+NE+ S ASISTC GLRGY +
Sbjct: 75 KKNNKLLAPDYSETYYNSSGNKVTTSPQIMDSCYYQGHIVNEKVSAASISTCQGLRGYIS 134
Query: 514 HHDQRYMIKPLNS--TDQEEHAVLTHNQEELDPTNLTCGVRNV----GRKQGHVRTSRSL 675
D++Y I+PL+S D++ HA+ + E D CGV + G Q + L
Sbjct: 135 QGDEKYFIEPLSSENLDEQAHALFKDDSNE-DQEKSNCGVDDALWLQGLHQDVALPATRL 193
Query: 676 KNPEKEDFLQAEKYIDLFLVLDRAFYNMHNGNITSIRSFVFDVINLLNVIYNTIDIQVTL 855
+ +KYI+ ++VLD + +N N+ IR V ++ N +N++YN +D V L
Sbjct: 194 IKLNDGMVQEPKKYIEYYVVLDNGEFKKYNKNLAEIRKIVLEMANYINMLYNKLDAHVAL 253
Query: 856 VGMEIWSDGDKIKVVPETSVTFNNFLNWHHSNLRKMKTHDHAQLLSGISFKNGIAGMA-A 1032
VG+EIW+DGDKIK+ P+ + T NF W ++L K K HD AQL+S F G+A
Sbjct: 254 VGVEIWTDGDKIKITPDANTTLENFSKWRGNDLLKRKHHDIAQLISSTDFSGSTVGLAFM 313
Query: 1033 XXXXXXXXXXXVIEAKRKNRVSLVXLMSHELGHVLGMPDVPYDTKCSSGGVCMKSYL 1203
+++ + + M+HE+GH LGM KC S M+ L
Sbjct: 314 SSMCSPYHSVGIVQDHSNYHLRVAGTMAHEMGHNLGMIHDYLSCKCPSEVCVMEQSL 370
>ref|NP_001041640.1| disintegrin and metalloproteinase domain-containing protein 28
isoform 4 [Mus musculus].
Length = 774
Score = 262 bits (669), Expect = 5e-70
Identities = 140/357 (39%), Positives = 206/357 (57%), Gaps = 7/357 (1%)
Frame = +1
Query: 154 AMKEMPESETYEVVLPKKLHILHKRETQNNQTEKPGKEERYEPELQYQIILNGEEVILSL 333
A+KE+P+++ YEVV P +LH L KRETQ +P +E +E EL+Y++ +NG+ +L L
Sbjct: 20 AIKELPKAKKYEVVYPIRLHPLRKRETQ-----EPEPKETFETELRYKMTVNGKVAVLYL 74
Query: 334 RKTEHLLGPDYTETYYSPRGEEITKSPQIMEHCYYKGHILNERDSVASISTCDGLRGYFT 513
+K LL PDY+ETYY+ G ++T SPQIM+ CYY+GHI+NE+ S ASISTC GLRGY +
Sbjct: 75 KKNNKLLAPDYSETYYNSSGNKVTTSPQIMDSCYYQGHIVNEKVSAASISTCQGLRGYIS 134
Query: 514 HHDQRYMIKPLNS--TDQEEHAVLTHNQEELDPTNLTCGVRNV----GRKQGHVRTSRSL 675
D++Y I+PL+S D++ HA+ + E D CGV + G Q + L
Sbjct: 135 QGDEKYFIEPLSSENLDEQAHALFKDDSNE-DQEKSNCGVDDALWLQGLHQDVALPATRL 193
Query: 676 KNPEKEDFLQAEKYIDLFLVLDRAFYNMHNGNITSIRSFVFDVINLLNVIYNTIDIQVTL 855
+ +KYI+ ++VLD + +N N+ IR V ++ N +N++YN +D V L
Sbjct: 194 IKLNDGMVQEPKKYIEYYVVLDNGEFKKYNKNLAEIRKIVLEMANYINMLYNKLDAHVAL 253
Query: 856 VGMEIWSDGDKIKVVPETSVTFNNFLNWHHSNLRKMKTHDHAQLLSGISFKNGIAGMA-A 1032
VG+EIW+DGDKIK+ P+ + T NF W ++L K K HD AQL+S F G+A
Sbjct: 254 VGVEIWTDGDKIKITPDANTTLENFSKWRGNDLLKRKHHDIAQLISSTDFSGSTVGLAFM 313
Query: 1033 XXXXXXXXXXXVIEAKRKNRVSLVXLMSHELGHVLGMPDVPYDTKCSSGGVCMKSYL 1203
+++ + + M+HE+GH LGM KC S M+ L
Sbjct: 314 SSMCSPYHSVGIVQDHSNYHLRVAGTMAHEMGHNLGMIHDYLSCKCPSEVCVMEQSL 370
>ref|NP_031428.2| disintegrin and metalloproteinase domain-containing protein 7 [Mus
musculus].
Length = 789
Score = 221 bits (563), Expect = 9e-58
Identities = 128/340 (37%), Positives = 190/340 (55%), Gaps = 2/340 (0%)
Frame = +1
Query: 178 ETYEVVLPKKLHILHKRETQN-NQTEKPGKEERYEPELQYQIILNGEEVILSLRKTEHLL 354
E E+V PKKL +LHKR+ + + ++ P E YE EL Y+I L + +IL L K L
Sbjct: 25 EGQELVHPKKLPLLHKRDLERIHDSDIP---EEYEEELLYEIKLGKKTLILHLLKAREFL 81
Query: 355 GPDYTETYYSPRGEEITKSPQIMEHCYYKGHILNERDSVASISTCDGLRGYFTHHDQRYM 534
+Y+ETYY+ + E TK PQI++HC+Y+G I++E DS ASISTC+GLRG+F +DQRY+
Sbjct: 82 SSNYSETYYNVKREVFTKHPQILDHCFYQGSIIHEFDSAASISTCNGLRGFFRVNDQRYL 141
Query: 535 IKPLNSTDQEEHAVLTHNQEELDPTNLTCGVRNVGRKQGHVRTSRSLKNPEKEDFLQAEK 714
I+P+ +D EH V +N + TN +C N +K + +++ ED EK
Sbjct: 142 IEPVKYSDDGEHLVYKYNVKAPYATNHSCVGLNFTKKSALIDV-ENIEEHNAEDH-HKEK 199
Query: 715 YIDLFLVLDRAFYNMHNGNITSIRSFVFDVINLLNVIYNTIDIQVTLVGMEIWSDGDKIK 894
+I+LF+V D Y +N +R ++ ++N +N+IY T++I VTL G EIWS GDKI+
Sbjct: 200 FIELFVVADEYVYRRNNKPQNKLRKRIWGMVNFVNMIYKTLNIHVTLAGFEIWSAGDKIE 259
Query: 895 VVPETSVTFNNFLNWHHSNLRKMKTHDHAQLLSGISFKNGIAGMAAXXXXXXXXXXXVIE 1074
+V T +F W + L+K K DH LLSG + G+A +
Sbjct: 260 IVSNLESTLLHFSTWQETVLKKRKDFDHVILLSGKWLYTSMQGIAYPGGICQILRSCSVV 319
Query: 1075 AKRKNRVSLV-XLMSHELGHVLGMPDVPYDTKCSSGGVCM 1191
V+++ M+H+LGH LGM + C G M
Sbjct: 320 KDLLPDVNIIGNRMAHQLGHSLGMQHDGFPCTCPLGKCVM 359
>ref|NP_031429.1| disintegrin and metalloproteinase domain-containing protein 8
precursor [Mus musculus].
Length = 826
Score = 185 bits (470), Expect = 5e-47
Identities = 115/357 (32%), Positives = 179/357 (50%), Gaps = 7/357 (1%)
Frame = +1
Query: 166 MPESETYEVVLPKKLHILHKRETQNNQTEKPGKEERYEPELQYQIILNGEEVILSLRKTE 345
+P + YEVV P++L R P +Y L Y + +G L LRK
Sbjct: 21 LPHVKQYEVVWPRRLAASRSRRAL------PSHWGQYPESLSYALGTSGHVFTLHLRKNR 74
Query: 346 HLLGPDYTETYYSPRGEEITKSPQIMEHCYYKGHILNERDSVASISTCDGLRGYFTHHDQ 525
LLG YTETY + G E+T+ Q +HC Y+GH+ S ASISTC GLRG+F
Sbjct: 75 DLLGSSYTETYSAANGSEVTEQLQEQDHCLYQGHVEGYEGSAASISTCAGLRGFFRVGST 134
Query: 526 RYMIKPLNSTDQEEHAVLTHNQEELDPTNLTCGVRNVGRKQGHVRTSRSLKNPEKEDFLQ 705
++I+PL++ ++ +HA+ + + L TCGV++ R + + +
Sbjct: 135 VHLIEPLDADEEGQHAM--YQAKHLQQKAGTCGVKDTNLNDLGPRALEIYRAQPRNWLIP 192
Query: 706 AE-KYIDLFLVLDRAFYNMHNGNITSIRSFVFDVINLLNVIYNTIDIQVTLVGMEIWSDG 882
E +Y++L++V D + G+ ++R V +V+N ++ +Y + +V LVG+EIW+
Sbjct: 193 RETRYVELYVVADSQEF-QKLGSREAVRQRVLEVVNHVDKLYQELSFRVVLVGLEIWNK- 250
Query: 883 DKIKVVPETSVTFNNFLNWHHSNLRKMKTHDHAQLLSGISFKNGIAGMAAXXXXXXXXXX 1062
DK + +VT NFL+W NL+ HD+ QL++G+ F G+A
Sbjct: 251 DKFYISRYANVTLENFLSWREQNLQGQHPHDNVQLITGVDFIGSTVGLAKVSALCSRHSG 310
Query: 1063 XVIEAKRKNRVSLVXLMSHELGHVLGM---PDVP--YDTKCSSGGVC-MKSYLSSKF 1215
V + KN + + M+HELGH LGM D+P Y + GG C M + SKF
Sbjct: 311 AVNQDHSKNSIGVASTMAHELGHNLGMSHDEDIPGCYCPEPREGGGCIMTESIGSKF 367
>ref|NP_031426.2| disintegrin and metalloproteinase domain-containing protein 12
precursor [Mus musculus].
Length = 903
Score = 150 bits (380), Expect = 1e-36
Identities = 83/301 (27%), Positives = 148/301 (49%), Gaps = 5/301 (1%)
Frame = +1
Query: 286 LQYQIILNGEEVILSLRKTEHLLGPDYTETYYSPRGEEITKSPQIMEHCYYKGHILNERD 465
L Q+ L ++ILSL + E L+ +TET+Y G +++ + +HCYY GH+ +
Sbjct: 69 LTVQLQLESRDLILSLERNEGLIANGFTETHYLQDGTDVSLTRNHTDHCYYHGHVQGDAA 128
Query: 466 SVASISTCDGLRGYFTHHDQRYMIKPLNSTDQEEHAVLTHNQEELDPTNLTCGVR----N 633
SV S+STC GLRG ++ Y ++P+ +T V + + CG + N
Sbjct: 129 SVVSLSTCSGLRGLIMFENKTYSLEPMKNTTDSYKLVPAESMTNIQGL---CGSQHNKSN 185
Query: 634 VGRKQGHVRTSRSLKNPEKEDFLQAEKYIDLFLVLDRAFYNMHNGNITSIRSFVFDVINL 813
+ + TS+ K + L+ KY++L +V D + ++ ++ + ++ N
Sbjct: 186 LTMEDVSPGTSQMRARRHKRETLKMTKYVELVIVADNREFQRQGKDLEKVKQRLIEIANH 245
Query: 814 LNVIYNTIDIQVTLVGMEIWSDGDKIKVVPETSVTFNNFLNWHHSNLRKMKTHDHAQLLS 993
++ Y ++I++ LVG+E+W+D DK + + + + FL+W L K+HD+AQL+S
Sbjct: 246 VDKFYRPLNIRIVLVGVEVWNDIDKCSISQDPFTSLHEFLDWRKIKLLPRKSHDNAQLIS 305
Query: 994 GISFKNGIAGMA-AXXXXXXXXXXXVIEAKRKNRVSLVXLMSHELGHVLGMPDVPYDTKC 1170
G+ F+ GMA V+ + + ++HELGH GM + C
Sbjct: 306 GVYFQGTTIGMAPIMSMCTAEQSGGVVMDHSDSPLGAAVTLAHELGHNFGMNHDTLERGC 365
Query: 1171 S 1173
S
Sbjct: 366 S 366
>ref|NP_033746.1| disintegrin and metalloproteinase domain-containing protein 19
preproprotein [Mus musculus].
Length = 920
Score = 149 bits (375), Expect = 6e-36
Identities = 89/306 (29%), Positives = 160/306 (52%), Gaps = 7/306 (2%)
Frame = +1
Query: 247 TEKPGKEERYEPELQYQIILNGEEVILSLRKTEHLLGPDYTETYYSPRGEEITKSPQIME 426
+E PG+ ++ + +++ G E+IL L K EHL P YTET Y+ G T + + +
Sbjct: 54 SESPGRG-KHPLRAELRVMAEGRELILDLEKNEHLFAPAYTETCYTASGNPQTSTLKSED 112
Query: 427 HCYYKGHILNERDSVASISTCDGLRG-YFTHHDQRYMIKPLNSTDQEEHAVLTHNQEELD 603
HC+Y G + + +S ++STC G+RG + Y+I+P+ ++D +H + L
Sbjct: 113 HCFYHGTVRDVDESSVTLSTCRGIRGLIIVRSNLSYIIEPVPNSD-SQHRIYRSEHLTLP 171
Query: 604 PTNLTCGVRNVG---RKQGHVRTSRSLKNPE--KEDFLQAEKYIDLFLVLDRAFYNMHNG 768
P N CG + G + T ++ K P K + L + KY++L+LV D A + +
Sbjct: 172 PGN--CGFEHSGPTSKDWALQFTHQTKKQPRRMKREDLHSMKYVELYLVADYAEFQKNRH 229
Query: 769 NITSIRSFVFDVINLLNVIYNTIDIQVTLVGMEIWSDGDKIKVVPETSVTFNNFLNWHHS 948
+ + + + ++ N ++ Y +++I++ LVG+E+W+ GDK +V T +FL+W
Sbjct: 230 DQDATKRKLMEIANYVDKFYRSLNIRIALVGLEVWTHGDKCEVSENPYSTLWSFLSWRR- 288
Query: 949 NLRKMKTHDHAQLLSGISFKNGIAGMAAXXXXXXXXXXXVIEAKR-KNRVSLVXLMSHEL 1125
L K+HD+AQL++G SF+ G+A + +N + + ++HE+
Sbjct: 289 KLLAQKSHDNAQLITGRSFQGTTIGLAPLMAMCSVYQSGGVSMDHSENAIGVASTVAHEI 348
Query: 1126 GHVLGM 1143
GH GM
Sbjct: 349 GHNFGM 354
>ref|NP_031430.2| disintegrin and metalloproteinase domain-containing protein 9
precursor [Mus musculus].
Length = 845
Score = 135 bits (341), Expect = 5e-32
Identities = 90/330 (27%), Positives = 158/330 (47%), Gaps = 9/330 (2%)
Frame = +1
Query: 181 TYEVVLPKKLHILHKRETQNNQTEKPGKEERYEPELQYQIILNGEEVILSLRKTEHLLGP 360
+YE++ P +L +RE ++ ++ Y I G++ I+ L + LL
Sbjct: 42 SYEIITPWRL-TRERREALGPSSQ----------QISYVIQAQGKQHIIHLERNTDLLPN 90
Query: 361 DYTETYYSPRGEEITKSPQIMEHCYYKGHILNERDSVASISTCDGLRGYFTHHDQRYMIK 540
D+ Y G ++ P + HC+Y+G++ ++S ++S C GLRG + + I+
Sbjct: 91 DFVVYTYDKEGSLLSDHPNVQSHCHYRGYVEGVQNSAVAVSACFGLRGLLHLENASFGIE 150
Query: 541 PLNSTDQEEHAVLTHNQEELDPTNLTCGVRN--------VGRKQGHVRTSRSLKNPEKED 696
PL+++ EH + +P L CGV N G ++ H ++ L+ +
Sbjct: 151 PLHNSSHFEHIFYPMDGIHQEP--LRCGVSNRDTEKEGTQGDEEEHPSVTQLLRR--RRA 206
Query: 697 FLQAEKYIDLFLVLDRAFYNMHNGNITSIRSFVFDVINLLNVIYNTIDIQVTLVGMEIWS 876
L +Y++LF+V+D+ Y+M N T++R + + N L+ +Y ++I++ LVG+EIW+
Sbjct: 207 VLPQTRYVELFIVVDKERYDMMGRNQTAVREEMIRLANYLDSMYIMLNIRIVLVGLEIWT 266
Query: 877 DGDKIKVVPETSVTFNNFLNWHHSNLRKMKTHDHAQLLSGISFKNGIAGMAAXXXXXXXX 1056
D + I ++ NF+ W L HD AQL+ F G AGMA
Sbjct: 267 DRNPINIIGGAGDVLGNFVQWREKFLITRWRHDSAQLVLKKGF-GGTAGMAFVGTVCSRS 325
Query: 1057 XXXVIEAKRKNRV-SLVXLMSHELGHVLGM 1143
I + V + +++HELGH LGM
Sbjct: 326 HAGGINVFGQITVETFASIVAHELGHNLGM 355
>ref|NP_001157001.1| disintegrin and metalloproteinase domain-containing protein 33
isoform 2 [Mus musculus].
Length = 771
Score = 129 bits (325), Expect = 4e-30
Identities = 80/311 (25%), Positives = 141/311 (45%), Gaps = 9/311 (2%)
Frame = +1
Query: 310 GEEVILSLRKTEHLLGPDYTETYYSPRGEEITKSPQIMEHCYYKGHILNERDSVASISTC 489
G++++L L K LL P YTET+Y P G + SP +HC Y G + R+S +STC
Sbjct: 75 GQDLLLELEKKHKLLAPGYTETHYRPDGHPVVLSPNHTDHCQYHGRVRGFRESWVVLSTC 134
Query: 490 DGLRGYFTHHDQ-RYMIKPLNSTDQEEHAVLTHNQEELDPTNLTCGV---RNVGRKQGHV 657
G+ G + Y ++P D ++ TH ++ GV +N K G
Sbjct: 135 SGMSGLIVLSSKVSYYLQPRTPGDTKDFP--THEIFRMEQLFTWRGVQRDKNSQYKAGMA 192
Query: 658 RTSRSLKNPEKEDFLQAEKYIDLFLVLDRAFYNMHNGNITSIRSFVFDVINLLNVIYNTI 837
++ + + ++ +Y++L++V D + + + N+ R + +V N ++ I T+
Sbjct: 193 SLPHVPQSRVRREARRSPRYLELYIVADHTLFLLQHQNLNHTRQRLLEVANCVDQILRTL 252
Query: 838 DIQVTLVGMEIWSDGDKIKVVPETSVTFNNFLNWHHSNLRKMKTHDHAQLLSGISFKNGI 1017
DIQ+ L G+E+W++ D ++ + + T FL W + + HD QLL+G +F+
Sbjct: 253 DIQLVLTGLEVWTEQDLSRITQDANETLWAFLQWRR-GVWARRPHDSTQLLTGRTFQGTT 311
Query: 1018 AGMAAXXXXXXXXXXXVIEAKRKN-RVSLVXLMSHELGHVLGMPDVP----YDTKCSSGG 1182
G+A + + M+HE+GH LG+ P GG
Sbjct: 312 VGLAPVEGICRAESSGGVSTDHSELPIGTAATMAHEIGHSLGLHHDPEGCCVQADAEQGG 371
Query: 1183 VCMKSYLSSKF 1215
M++ F
Sbjct: 372 CVMEAATGHPF 382
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 38,110,644
Number of extensions: 935478
Number of successful extensions: 2601
Number of sequences better than 1.0e-05: 53
Number of HSP's gapped: 2499
Number of HSP's successfully gapped: 55
Length of query: 405
Length of database: 15,617,559
Length adjustment: 104
Effective length of query: 301
Effective length of database: 12,493,815
Effective search space: 3760638315
Effective search space used: 3760638315
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002517
(1215 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_003132859.1| PREDICTED: ADAM DEC1 [Sus scrofa]. 695 0.0
Alignment gi|XP_001924211.3| PREDICTED: disintegrin and metalloproteinase... 263 1e-70
Alignment gi|XP_001924235.3| PREDICTED: disintegrin and metalloproteinase... 232 3e-61
Alignment gi|XP_001924331.3| PREDICTED: disintegrin and metalloproteinase... 221 5e-58
Alignment gi|XP_003359085.1| PREDICTED: disintegrin and metalloproteinase... 181 1e-45
Alignment gi|XP_001925699.2| PREDICTED: disintegrin and metalloproteinase... 139 3e-33
Alignment gi|XP_001925816.2| PREDICTED: disintegrin and metalloproteinase... 139 3e-33
Alignment gi|XP_003134154.2| PREDICTED: disintegrin and metalloproteinase... 112 4e-25
Alignment gi|XP_001929375.1| PREDICTED: disintegrin and metalloproteinase... 107 1e-23
Alignment gi|XP_001929377.1| PREDICTED: disintegrin and metalloproteinase... 107 1e-23
>ref|XP_003132859.1| PREDICTED: ADAM DEC1 [Sus scrofa].
Length = 454
Score = 695 bits (1794), Expect = 0.0
Identities = 343/361 (95%), Positives = 344/361 (95%)
Frame = +1
Query: 133 IVQPQAIAMKEMPESETYEVVLPKKLHILHKRETQNNQTEKPGKEERYEPELQYQIILNG 312
IVQPQAIAMKEMPESETYEVVLPKKLHILHKRETQNNQTEKPGKEERYEPELQYQIILNG
Sbjct: 12 IVQPQAIAMKEMPESETYEVVLPKKLHILHKRETQNNQTEKPGKEERYEPELQYQIILNG 71
Query: 313 EEVILSLRKTEHLLGPDYTETYYSPRGEEITKSPQIMEHCYYKGHILNERDSVASISTCD 492
EEVILSLRKTEHLLGPDYTETYYSPRGEEIT+SPQIMEHCYYKGHILNERDSVASISTCD
Sbjct: 72 EEVILSLRKTEHLLGPDYTETYYSPRGEEITRSPQIMEHCYYKGHILNERDSVASISTCD 131
Query: 493 GLRGYFTHHDQRYMIKPLNSTDQEEHAVLTHNQEELDPTNLTCGVRNVGRKQGHVRTSRS 672
GLRGYFTHHDQRYMIKPLNSTDQEEHAVLTHNQEELDPTNLTCGVRNVGRKQGHVRTSRS
Sbjct: 132 GLRGYFTHHDQRYMIKPLNSTDQEEHAVLTHNQEELDPTNLTCGVRNVGRKQGHVRTSRS 191
Query: 673 LKNPEKEDFLQAEKYIDLFLVLDRAFYNMHNGNITSIRSFVFDVINLLNVIYNTIDIQVT 852
LKNPEKEDFLQAEKYIDLFLVLDRAFYNMHNGNITSIRSFVFDVINLLNVIYNTIDIQVT
Sbjct: 192 LKNPEKEDFLQAEKYIDLFLVLDRAFYNMHNGNITSIRSFVFDVINLLNVIYNTIDIQVT 251
Query: 853 LVGMEIWSDGDKIKVVPETSVTFNNFLNWHHSNLRKMKTHDHAQLLSGISFKNGIAGMAA 1032
LVGMEIWSDGDKIKVVPETSVTFNNFLNWHHSNLRKMKTHDHAQLLSGISFKNGIAGMAA
Sbjct: 252 LVGMEIWSDGDKIKVVPETSVTFNNFLNWHHSNLRKMKTHDHAQLLSGISFKNGIAGMAA 311
Query: 1033 XXXXXXXXXXXVIEAKRKNRVSLVXLMSHELGHVLGMPDVPYDTKCSSGGVCMKSYLSSK 1212
VIEAKRKNRVSLV LMSHELGHVLGMPDVPYDTKCSSG M YLSSK
Sbjct: 312 SNSLCSPSSVSVIEAKRKNRVSLVGLMSHELGHVLGMPDVPYDTKCSSGSCVMNQYLSSK 371
Query: 1213 F 1215
F
Sbjct: 372 F 372
>ref|XP_001924211.3| PREDICTED: disintegrin and metalloproteinase domain-containing
protein 28, partial [Sus scrofa].
Length = 759
Score = 263 bits (673), Expect = 1e-70
Identities = 143/353 (40%), Positives = 213/353 (60%), Gaps = 7/353 (1%)
Frame = +1
Query: 154 AMKEMPESETYEVVLPKKLHILHKRETQNNQTEKPGKEERYEPELQYQIILNGEEVILSL 333
A+KE+PE + YEVV P++LH LHKRE + +PG+EE++E EL+Y++ +NG+ +L L
Sbjct: 2 AVKELPEVKKYEVVFPRRLHPLHKREIK-----QPGQEEKFETELKYEMAVNGKIAVLYL 56
Query: 334 RKTEHLLGPDYTETYYSPRGEEITKSPQIMEHCYYKGHILNERDSVASISTCDGLRGYFT 513
+K + LL P YTET+Y+ G+E+T SPQIM++CYY+GHI+NE S ASISTC GLRGYF+
Sbjct: 57 KKNKDLLAPGYTETHYNSSGKEVTTSPQIMDNCYYQGHIINETVSDASISTCRGLRGYFS 116
Query: 514 HHDQRYMIKPLNST--DQEEHAVLTHNQEELDPTNLTCGVRNV----GRKQGHVRTSRSL 675
DQRY I+PL+ T D++EHA+ +E TN CG+ +V G + V SL
Sbjct: 117 QGDQRYFIEPLSPTAQDEQEHALFKDEPQE-QQTNSDCGMDDVLWAHGFHRNMVPPDSSL 175
Query: 676 KNPEKEDFLQAEKYIDLFLVLDRAFYNMHNGNITSIRSFVFDVINLLNVIYNTIDIQVTL 855
N + + +KY++ +LVLD + ++ + IR VF+++N +N++Y ++ V L
Sbjct: 176 VNSKDWKSWERKKYVEYYLVLDNGEFIKYHQDAEEIRKRVFEMVNYINMLYKKLNTHVAL 235
Query: 856 VGMEIWSDGDKIKVVPETSVTFNNFLNWHHSNLRKMKTHDHAQLLSGISFKNGIAGMA-A 1032
+GMEIW+D DKI + S T NF W + L + K HD AQL++ F G+A
Sbjct: 236 IGMEIWNDKDKIHITSNASSTLENFSQWRGNVLLRRKPHDVAQLITAKGFSGTTVGLAFM 295
Query: 1033 XXXXXXXXXXXVIEAKRKNRVSLVXLMSHELGHVLGMPDVPYDTKCSSGGVCM 1191
+I+ N + + M+HE+GH GM + CSS VC+
Sbjct: 296 STMCSPYHSVGLIQDHSNNGLRVAGTMAHEMGHNFGMFHDTDNCHCSS-AVCV 347
>ref|XP_001924235.3| PREDICTED: disintegrin and metalloproteinase domain-containing
protein 7-like [Sus scrofa].
Length = 776
Score = 232 bits (592), Expect = 3e-61
Identities = 128/338 (37%), Positives = 192/338 (56%), Gaps = 1/338 (0%)
Frame = +1
Query: 187 EVVLPKKLHILHKRETQNNQTEKPGKEERYEPELQYQIILNGEEVILSLRKTEHLLGPDY 366
E+V PKKL ++ KR + + GK YE EL Y++ LN + +IL L K+ L +Y
Sbjct: 28 ELVYPKKLPLIQKRNVWHTHEDDIGKT--YEEELLYELSLNRKTLILHLLKSREFLASNY 85
Query: 367 TETYYSPRGEEITKSPQIMEHCYYKGHILNERDSVASISTCDGLRGYFTHHDQRYMIKPL 546
+ETYYS +GEE+T PQIM+HC+Y+G I++E DS ASISTC GLRG+F +DQRY+I+P+
Sbjct: 86 SETYYSTKGEEVTTHPQIMDHCFYQGSIIHEFDSAASISTCSGLRGFFRVNDQRYLIEPV 145
Query: 547 NSTDQEEHAVLTHNQEELDPTNLTCGVRNVGRKQGHVRTSRSLKNPEKEDFLQAEKYIDL 726
+D+ EH V +N + N +C N R ++S+++ + E ++ EK+I+L
Sbjct: 146 KYSDEGEHLVFRYNPKVQHAANYSCTELNFTRTAVLKDNTKSMEDSKMES-IEKEKHIEL 204
Query: 727 FLVLDRAFYNMHNGNITSIRSFVFDVINLLNVIYNTIDIQVTLVGMEIWSDGDKIKVVPE 906
F+V D Y H + +R+ V+ ++N +N+IY T+DI VTLVG+E W++GDKI++
Sbjct: 205 FIVADNNVY--HRNPNSKVRNRVWGMVNFVNMIYKTLDIHVTLVGLETWTNGDKIEIDSN 262
Query: 907 TSVTFNNFLNWHHSNLRKMKTHDHAQLLSGISFKNGIAGMA-AXXXXXXXXXXXVIEAKR 1083
T F W L+K K DH LLSG G + V++
Sbjct: 263 IETTLKRFSAWQEIILKKKKNFDHVVLLSGKWLYTSAQGTSYPGGMCLPYYSSSVVKDLL 322
Query: 1084 KNRVSLVXLMSHELGHVLGMPDVPYDTKCSSGGVCMKS 1197
+ ++ M+H+LGH LGM Y C+ G M S
Sbjct: 323 PDLNTIASRMAHQLGHNLGMKHDDYPCTCTLGKCVMDS 360
>ref|XP_001924331.3| PREDICTED: disintegrin and metalloproteinase domain-containing
protein 7-like [Sus scrofa].
Length = 796
Score = 221 bits (564), Expect = 5e-58
Identities = 119/312 (38%), Positives = 179/312 (57%), Gaps = 1/312 (0%)
Frame = +1
Query: 265 EERYEPELQYQIILNGEEVILSLRKTEHLLGPDYTETYYSPRGEEITKSPQIMEHCYYKG 444
+E YE EL Y++ LN + +IL L K+ L +Y+ETYYS +GEE+T PQIM+HC+Y+G
Sbjct: 6 QEAYEEELLYELSLNRKTLILHLLKSREFLASNYSETYYSTKGEEVTTHPQIMDHCFYQG 65
Query: 445 HILNERDSVASISTCDGLRGYFTHHDQRYMIKPLNSTDQEEHAVLTHNQEELDPTNLTCG 624
I++E DS ASISTC GLRG+F +DQRY+I+P+ +D+ EH V +N + N +C
Sbjct: 66 SIIHEFDSAASISTCSGLRGFFRVNDQRYLIEPVKYSDEGEHLVFRYNPKVQHAANYSCT 125
Query: 625 VRNVGRKQGHVRTSRSLKNPEKEDFLQAEKYIDLFLVLDRAFYNMHNGNITSIRSFVFDV 804
N R ++S+++ + E ++ EK+I+LF+V D Y H + +R+ V+ +
Sbjct: 126 ELNFTRTAVLKDNTKSMEDSKMES-IEKEKHIELFIVADNNVY--HRNPNSKVRNRVWGM 182
Query: 805 INLLNVIYNTIDIQVTLVGMEIWSDGDKIKVVPETSVTFNNFLNWHHSNLRKMKTHDHAQ 984
+N +N+IY T+DI VTLVG+E W++GDKI++ T F W L+K K DH
Sbjct: 183 VNFVNMIYKTLDIHVTLVGLETWTNGDKIEIDSNIETTLKRFSAWQEIILKKKKNFDHVV 242
Query: 985 LLSGISFKNGIAGMA-AXXXXXXXXXXXVIEAKRKNRVSLVXLMSHELGHVLGMPDVPYD 1161
LLSG G + V++ + ++ M+H+LGH LGM Y
Sbjct: 243 LLSGKWLYTSAQGTSYPGGMCLPYYSSSVVKDLLPDLNTIASRMAHQLGHSLGMKHDDYP 302
Query: 1162 TKCSSGGVCMKS 1197
C+ G M S
Sbjct: 303 CTCTLGKCVMDS 314
>ref|XP_003359085.1| PREDICTED: disintegrin and metalloproteinase domain-containing
protein 28-like [Sus scrofa].
Length = 288
Score = 181 bits (458), Expect = 1e-45
Identities = 95/204 (46%), Positives = 141/204 (69%), Gaps = 6/204 (2%)
Frame = +1
Query: 148 AIAMKEMPESETYEVVLPKKLHILHKRETQNNQTEKPGKEERYEPELQYQIILNGEEVIL 327
A A+KE+PE + YEVV P++LH LHKRE + +PG+EE++E EL+Y++ +NG+ +L
Sbjct: 18 ANAVKELPEVKKYEVVFPRRLHPLHKREIK-----QPGQEEKFETELKYEMTVNGKIAVL 72
Query: 328 SLRKTEHLLGPDYTETYYSPRGEEITKSPQIMEHCYYKGHILNERDSVASISTCDGLRGY 507
L+K + LL P YTET+Y+ G+E+T SPQIM++CYY+GHI+NE S ASISTC GLRGY
Sbjct: 73 YLKKNKDLLAPGYTETHYNSSGKEVTTSPQIMDNCYYQGHIINETVSDASISTCRGLRGY 132
Query: 508 FTHHDQRYMIKPLNST--DQEEHAVLTHNQEELDPTNLTCGVRNV----GRKQGHVRTSR 669
F+ +QRY I+PL+ T D++EHA+ +E TN CG+ +V G + V
Sbjct: 133 FSQGEQRYFIEPLSPTAQDEQEHALFKDEPQE-QQTNSDCGMDDVLWAHGFHRNMVPPDS 191
Query: 670 SLKNPEKEDFLQAEKYIDLFLVLD 741
SL + + + + + +KY++ +LVLD
Sbjct: 192 SLNSKDWKSW-ERKKYVEYYLVLD 214
>ref|XP_001925699.2| PREDICTED: disintegrin and metalloproteinase domain-containing
protein 9 [Sus scrofa].
Length = 819
Score = 139 bits (350), Expect = 3e-33
Identities = 97/348 (27%), Positives = 163/348 (46%), Gaps = 9/348 (2%)
Frame = +1
Query: 181 TYEVVLPKKLHILHKRETQNNQTEKPGKEERYEPELQYQIILNGEEVILSLRKTEHLLGP 360
+YE++ P +L + + +P E+ + Y I G+E I+ L + + LL
Sbjct: 42 SYEIITPWRL------TRERREAPRPSSEQ-----VSYVIQAEGKEHIIHLERNKDLLPK 90
Query: 361 DYTETYYSPRGEEITKSPQIMEHCYYKGHILNERDSVASISTCDGLRGYFTHHDQRYMIK 540
D+ Y+ G I+ P I HC+Y+G++ +S ++S C GLRG + Y I+
Sbjct: 91 DFVVYTYNNEGALISDYPDIQNHCHYRGYVEGIYNSSIALSDCFGLRGLLHIENVSYGIE 150
Query: 541 PLNSTDQEEHAVLTHNQEELDPTNLTCGVRNVGRKQGHVRTSRSLKNPEKEDFLQAEK-- 714
PL ++ EH + +P CGV N ++ V+ + P L+ +
Sbjct: 151 PLQNSSHFEHVFYRMDDVHREPVK--CGVSNKDIEEEIVKDEEE-EPPSVTQLLRRRRAV 207
Query: 715 -----YIDLFLVLDRAFYNMHNGNITSIRSFVFDVINLLNVIYNTIDIQVTLVGMEIWSD 879
Y++LF+V+D+ Y+M N T++R + + N L+ +Y ++I++ LVG+EIW++
Sbjct: 208 LPQTRYVELFIVVDKERYDMMGRNQTAVREEMIRLANYLDSMYIMLNIRIVLVGLEIWTN 267
Query: 880 GDKIKVVPETSVTFNNFLNWHHSNLRKMKTHDHAQLLSGISFKNGIAGMAAXXXXXXXXX 1059
G+ I ++ NF+ W L + HD AQL+ F G AGMA
Sbjct: 268 GNLINIIGGAGDVLGNFVQWREKFLITRRRHDSAQLVLKKGF-GGTAGMAFVGTVCSRSH 326
Query: 1060 XXVIEAKRKNRV-SLVXLMSHELGHVLGM-PDVPYDTKCSSGGVCMKS 1197
I + V + +++HELGH LGM D D C + M S
Sbjct: 327 AGGINVFGQITVETFASIVAHELGHNLGMNHDDGRDCYCGAKSCIMNS 374
>ref|XP_001925816.2| PREDICTED: disintegrin and metalloproteinase domain-containing
protein 8 [Sus scrofa].
Length = 784
Score = 139 bits (350), Expect = 3e-33
Identities = 86/286 (30%), Positives = 134/286 (46%), Gaps = 9/286 (3%)
Frame = +1
Query: 385 PRGEEITKSPQIMEHCYYKGHILNERDSVASISTCDGLRGYFTHHDQRYMIKPLNSTDQE 564
PR SP + C+Y+GH+ + S S+STC GLRG+F ++I+PL +E
Sbjct: 40 PRARRALPSPS--DDCFYQGHVEGHQRSAVSLSTCSGLRGFFRAGSAVHLIEPLEGGGEE 97
Query: 565 EHAVLTHNQEELDPTNLTCGVRNVGRKQGHVRTSRSLKNPEKED---FLQAEKYIDLFLV 735
L + E L TCGV + + + P D + +Y++LF+V
Sbjct: 98 GRHAL-YQAEHLQQKARTCGVNDSSLESILGPRISAALRPRVSDNWPLPRETRYVELFVV 156
Query: 736 LDRAFYNMHNGNITSIRSFVFDVINLLNVIYNTIDIQVTLVGMEIWSDGDKIKVVPETSV 915
D + G+ ++R V +V+N ++ +Y ++ +V LVG+EIW+ GDKI + +
Sbjct: 157 TDSTEFRQL-GSREAVRRRVLEVVNHVDKLYQELNFRVVLVGLEIWNSGDKIAISSDPDT 215
Query: 916 TFNNFLNWHHSNLRKMKTHDHAQLLSGISFKNGIAGMAAXXXXXXXXXXXVIEAKRKNRV 1095
T NNFL W +L HD+AQL++G+ F G+A V + N +
Sbjct: 216 TLNNFLAWRARDLASRHLHDNAQLITGVDFTGTTVGLAKVSAMCSRDSGAVNQDHSHNPI 275
Query: 1096 SLVXLMSHELGHVLGMPDVPYDTKC------SSGGVCMKSYLSSKF 1215
+ M+HE+GH LGM C GG M + L S F
Sbjct: 276 GVASTMAHEMGHNLGMDHDENVQGCFCPVPQGGGGCVMAASLGSAF 321
>ref|XP_003134154.2| PREDICTED: disintegrin and metalloproteinase domain-containing
protein 19 [Sus scrofa].
Length = 863
Score = 112 bits (280), Expect = 4e-25
Identities = 75/277 (27%), Positives = 132/277 (47%), Gaps = 10/277 (3%)
Frame = +1
Query: 415 QIMEHCYYKGHILNERDSVASISTCDGLRGYFT-HHDQRYMIKPLNSTDQEEHAVLTHNQ 591
Q +HC+Y G + +S ++STC G+RG T + Y+I+PL ++ L +
Sbjct: 53 QRRDHCFYHGTVRKAEESSVTLSTCRGMRGLITVSSNLSYIIEPLPGSEGHH---LIYRS 109
Query: 592 EELDPTNLTCGVRN---VGRKQGHVRTSRSLKNPE--KEDFLQAEKYIDLFLVLDRAFYN 756
E L CG ++ R T+++ K P K + L + KY++L+LV D A +
Sbjct: 110 EHLKLPLGNCGFQHPKPTARDWALQFTNQTKKRPRRMKREDLHSMKYVELYLVADYAEFQ 169
Query: 757 MHNGNITSIRSFVFDVINLLNVIYNTIDIQVTLVGMEIWSDGDKIKVVPETSVTFNNFLN 936
+ + + + + ++ N ++ Y +++I++ LVG+E+W+ G+ +V T +FL+
Sbjct: 170 KNRRDQDATKHKLMEIANYVDKFYRSLNIRIALVGLEVWTHGNMCEVSENPYSTLWSFLS 229
Query: 937 WHHSNLRKMKTHDHAQLLSGISFKNGIAGMAAXXXXXXXXXXXVIEAKR-KNRVSLVXLM 1113
W L K HD+AQL++G+SF G+A + +N V + M
Sbjct: 230 WRR-KLLAQKNHDNAQLITGMSFHGTTIGLAPLMAMCSVYQSGGVNMDHSENAVGVAATM 288
Query: 1114 SHELGHVLGMPDVPYD---TKCSSGGVCMKSYLSSKF 1215
+HE+GH GM D + GG M + F
Sbjct: 289 AHEMGHNFGMSHDSADCCSASAADGGCIMAAATGHPF 325
>ref|XP_001929375.1| PREDICTED: disintegrin and metalloproteinase domain-containing
protein 15 isoform 3 [Sus scrofa].
Length = 866
Score = 107 bits (268), Expect = 1e-23
Identities = 75/298 (25%), Positives = 132/298 (44%), Gaps = 12/298 (4%)
Frame = +1
Query: 286 LQYQIILNGEEVILSLRKTEHLLGPDYTETYYSPRGEEITKSPQIMEHCYYKGHILNERD 465
L+ ++ L+GE IL L +T L+ T +Y P G + +E+C Y+G + D
Sbjct: 69 LRIKLELDGESHILELLQTRELVSGRPTLVWYQPDGTRVVSEGHTLENCCYQGRVQGHTD 128
Query: 466 SVASISTCDGLRGYFTHHDQRYMIKPLNSTDQEEHAVLTHNQEELDPTNLTCGVR----- 630
S S+ TC GLRG +R + V++ Q+ L P + TC +
Sbjct: 129 SWVSVCTCSGLRGLVILSPERSYALEQRPGGLQGPPVISRIQDLLLPGH-TCALSWPAPV 187
Query: 631 ------NVGRKQGHVRTSRSLKNPEKEDFLQAEKYIDLFLVLDRAFYNMHNGNITSIRSF 792
Q H+R R D + K ++L +V D + + + + +
Sbjct: 188 PIQAPPEHPTGQHHIRRWR-------RDVVTETKVVELVIVADHSEVRRYR-DFQHLLNR 239
Query: 793 VFDVINLLNVIYNTIDIQVTLVGMEIWSDGDKIKVVPETSVTFNNFLNWHHSNLRKMKTH 972
+V LL+ + ++++V LVG+E W+ D I++ + +T ++FL+W ++L H
Sbjct: 240 TLEVALLLDTFFRPLNVRVALVGLEAWTQHDLIEISQDPGLTLDSFLHWRQTDLLPRLPH 299
Query: 973 DHAQLLSGISFKNGIAGMAAXXXXXXXXXXXVIEAKRKNRV-SLVXLMSHELGHVLGM 1143
D AQL++ SF + GMA + + + ++HELGH LG+
Sbjct: 300 DSAQLVTATSFSGPMVGMAIQNSICSPDFSGGVNMDHSTSILGVASSIAHELGHSLGL 357
>ref|XP_001929377.1| PREDICTED: disintegrin and metalloproteinase domain-containing
protein 15 isoform 4 [Sus scrofa].
Length = 841
Score = 107 bits (268), Expect = 1e-23
Identities = 75/298 (25%), Positives = 132/298 (44%), Gaps = 12/298 (4%)
Frame = +1
Query: 286 LQYQIILNGEEVILSLRKTEHLLGPDYTETYYSPRGEEITKSPQIMEHCYYKGHILNERD 465
L+ ++ L+GE IL L +T L+ T +Y P G + +E+C Y+G + D
Sbjct: 69 LRIKLELDGESHILELLQTRELVSGRPTLVWYQPDGTRVVSEGHTLENCCYQGRVQGHTD 128
Query: 466 SVASISTCDGLRGYFTHHDQRYMIKPLNSTDQEEHAVLTHNQEELDPTNLTCGVR----- 630
S S+ TC GLRG +R + V++ Q+ L P + TC +
Sbjct: 129 SWVSVCTCSGLRGLVILSPERSYALEQRPGGLQGPPVISRIQDLLLPGH-TCALSWPAPV 187
Query: 631 ------NVGRKQGHVRTSRSLKNPEKEDFLQAEKYIDLFLVLDRAFYNMHNGNITSIRSF 792
Q H+R R D + K ++L +V D + + + + +
Sbjct: 188 PIQAPPEHPTGQHHIRRWR-------RDVVTETKVVELVIVADHSEVRRYR-DFQHLLNR 239
Query: 793 VFDVINLLNVIYNTIDIQVTLVGMEIWSDGDKIKVVPETSVTFNNFLNWHHSNLRKMKTH 972
+V LL+ + ++++V LVG+E W+ D I++ + +T ++FL+W ++L H
Sbjct: 240 TLEVALLLDTFFRPLNVRVALVGLEAWTQHDLIEISQDPGLTLDSFLHWRQTDLLPRLPH 299
Query: 973 DHAQLLSGISFKNGIAGMAAXXXXXXXXXXXVIEAKRKNRV-SLVXLMSHELGHVLGM 1143
D AQL++ SF + GMA + + + ++HELGH LG+
Sbjct: 300 DSAQLVTATSFSGPMVGMAIQNSICSPDFSGGVNMDHSTSILGVASSIAHELGHSLGL 357
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 27,614,399
Number of extensions: 667920
Number of successful extensions: 1730
Number of sequences better than 1.0e-05: 42
Number of HSP's gapped: 1665
Number of HSP's successfully gapped: 42
Length of query: 405
Length of database: 11,343,932
Length adjustment: 101
Effective length of query: 304
Effective length of database: 8,829,335
Effective search space: 2684117840
Effective search space used: 2684117840
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002517
(1215 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr14 375 e-101
>Sscrofa_Chr14
|| Length = 153851969
Score = 375 bits (189), Expect = e-101
Identities = 189/189 (100%)
Strand = Plus / Plus
Query: 499 aggggatacttcacacatcacgatcagaggtacatgataaagcctctgaacagcactgac 558
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9503213 aggggatacttcacacatcacgatcagaggtacatgataaagcctctgaacagcactgac 9503272
Query: 559 caagaagaacacgccgtcctcacacacaaccaggaggagctagaccccactaaccttacc 618
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9503273 caagaagaacacgccgtcctcacacacaaccaggaggagctagaccccactaaccttacc 9503332
Query: 619 tgtggtgtaagaaatgttggcaggaaacagggccatgtccgaacttcaaggtcactcaaa 678
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9503333 tgtggtgtaagaaatgttggcaggaaacagggccatgtccgaacttcaaggtcactcaaa 9503392
Query: 679 aatccagag 687
|||||||||
Sbjct: 9503393 aatccagag 9503401
Score = 339 bits (171), Expect = 2e-90
Identities = 171/171 (100%)
Strand = Plus / Plus
Query: 822 gatttataataccatagatattcaagtgaccttggtaggtatggaaatctggtctgacgg 881
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9505031 gatttataataccatagatattcaagtgaccttggtaggtatggaaatctggtctgacgg 9505090
Query: 882 tgataagataaaggtggtacccgaaacaagtgtcacctttaacaactttctgaattggca 941
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9505091 tgataagataaaggtggtacccgaaacaagtgtcacctttaacaactttctgaattggca 9505150
Query: 942 tcattctaacctgaggaaaatgaagacccatgatcatgctcagctactcag 992
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9505151 tcattctaacctgaggaaaatgaagacccatgatcatgctcagctactcag 9505201
Score = 293 bits (148), Expect = 1e-76
Identities = 148/148 (100%)
Strand = Plus / Plus
Query: 1 tttgtaaagagaagtaggggaagataaaactggagagagagctggggagaccacatcttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9498092 tttgtaaagagaagtaggggaagataaaactggagagagagctggggagaccacatcttg 9498151
Query: 61 gcactctgaagcacatctcagctacctgcagtaaccagcatggctttgggactgctttct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9498152 gcactctgaagcacatctcagctacctgcagtaaccagcatggctttgggactgctttct 9498211
Query: 121 ctcctctggcttattgttcaacctcaag 148
||||||||||||||||||||||||||||
Sbjct: 9498212 ctcctctggcttattgttcaacctcaag 9498239
Score = 226 bits (114), Expect = 2e-56
Identities = 120/122 (98%)
Strand = Plus / Plus
Query: 147 agcaatagccatgaaggaaatgccggaatctgagacctatgaagtagttcttcctaaaaa 206
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 9498474 agcaatagccatgaaggaaatgccagaatctgagacctatgaagtagttcttcctaaaaa 9498533
Query: 207 gctacacattttacacaaaagggagacacagaacaaccagacagagaagcctggcaaaga 266
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9498534 actacacattttacacaaaagggagacacagaacaaccagacagagaagcctggcaaaga 9498593
Query: 267 gg 268
||
Sbjct: 9498594 gg 9498595
Score = 206 bits (104), Expect = 2e-50
Identities = 106/107 (99%)
Strand = Plus / Plus
Query: 1073 aggcaaagagaaagaatagagtctctcttgtangactgatgtcacatgagttaggtcatg 1132
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 9506283 aggcaaagagaaagaatagagtctctcttgtaggactgatgtcacatgagttaggtcatg 9506342
Query: 1133 tcctcgggatgcctgatgttccatatgataccaaatgttcctctggg 1179
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9506343 tcctcgggatgcctgatgttccatatgataccaaatgttcctctggg 9506389
Score = 170 bits (86), Expect = 1e-39
Identities = 86/86 (100%)
Strand = Plus / Plus
Query: 990 cagtggaatcagcttcaaaaatggaattgcaggaatggcagcctcgaattccttgtgttc 1049
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9505542 cagtggaatcagcttcaaaaatggaattgcaggaatggcagcctcgaattccttgtgttc 9505601
Query: 1050 cccatcatctgtttctgttattgagg 1075
||||||||||||||||||||||||||
Sbjct: 9505602 cccatcatctgtttctgttattgagg 9505627
Score = 159 bits (80), Expect = 4e-36
Identities = 80/80 (100%)
Strand = Plus / Plus
Query: 266 aggaaagatatgaacctgaacttcaatatcagattatattaaatggagaagaagtcattc 325
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9499479 aggaaagatatgaacctgaacttcaatatcagattatattaaatggagaagaagtcattc 9499538
Query: 326 tttccctacgaaaaactgag 345
||||||||||||||||||||
Sbjct: 9499539 tttccctacgaaaaactgag 9499558
Score = 157 bits (79), Expect = 2e-35
Identities = 79/79 (100%)
Strand = Plus / Plus
Query: 423 ggaacactgctactataaaggacatattttaaatgaacgggattctgtggccagcattag 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9501832 ggaacactgctactataaaggacatattttaaatgaacgggattctgtggccagcattag 9501891
Query: 483 tacttgtgatgggctgagg 501
|||||||||||||||||||
Sbjct: 9501892 tacttgtgatgggctgagg 9501910
Score = 151 bits (76), Expect = 1e-33
Identities = 79/80 (98%)
Strand = Plus / Plus
Query: 345 gcacctcctgggtccagactatactgagacatattactcacccagaggagaggaaatcac 404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9500308 gcacctcctgggtccagactatactgagacatattactcacccagaggagaggaaatcac 9500367
Query: 405 caaaagccctcagatcatgg 424
|| |||||||||||||||||
Sbjct: 9500368 cagaagccctcagatcatgg 9500387
Score = 143 bits (72), Expect = 3e-31
Identities = 72/72 (100%)
Strand = Plus / Plus
Query: 751 tataacatgcataatgggaatataacttcgataagaagctttgtgtttgatgtgataaac 810
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9504665 tataacatgcataatgggaatataacttcgataagaagctttgtgtttgatgtgataaac 9504724
Query: 811 ctactcaatgtg 822
||||||||||||
Sbjct: 9504725 ctactcaatgtg 9504736
Score = 129 bits (65), Expect = 4e-27
Identities = 65/65 (100%)
Strand = Plus / Plus
Query: 686 agaaagaagactttcttcaggctgagaaatacatcgatctgtttttggtgctggatagag 745
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9503615 agaaagaagactttcttcaggctgagaaatacatcgatctgtttttggtgctggatagag 9503674
Query: 746 ccttt 750
|||||
Sbjct: 9503675 ccttt 9503679
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 42,609,721
Number of extensions: 304
Number of successful extensions: 304
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 304
Number of HSP's successfully gapped: 11
Length of query: 1215
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1194
Effective length of database: 2,808,413,156
Effective search space: 3353245308264
Effective search space used: 3353245308264
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)