Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002551
(1859 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001107624.1| ribose-phosphate pyrophosphokinase 2 [Bos ta... 614 e-176
Alignment gi|NP_001039654.1| ribose-phosphate pyrophosphokinase 1 [Bos ta... 607 e-173
Alignment gi|NP_001095953.1| ribose-phosphate pyrophosphokinase 3 [Bos ta... 552 e-157
Alignment gi|NP_001074982.1| phosphoribosyl pyrophosphate synthase-associ... 275 1e-73
Alignment gi|XP_001790357.1| PREDICTED: phosphoribosyl pyrophosphate synt... 270 4e-72
Alignment gi|NP_001070325.1| phosphoribosyl pyrophosphate synthase-associ... 262 7e-70
Alignment gi|XP_002700484.1| PREDICTED: PRPS2 protein-like [Bos taurus]. 240 3e-63
>ref|NP_001107624.1| ribose-phosphate pyrophosphokinase 2 [Bos taurus].
Length = 321
Score = 614 bits (1583), Expect = e-176
Identities = 314/321 (97%), Positives = 317/321 (98%), Gaps = 3/321 (0%)
Frame = +1
Query: 157 MPNIVLFSGSSHQDLSQRVADRLGLELGKVVTKKFSNQETSVEIGESVRGEDVYIIQSGC 336
MPNIVLFSGSSHQDLSQRVADRLGLELGKV+TKKFSNQETSVEIGESVRGEDVYIIQSGC
Sbjct: 1 MPNIVLFSGSSHQDLSQRVADRLGLELGKVITKKFSNQETSVEIGESVRGEDVYIIQSGC 60
Query: 337 GEINDNLMELLIMINACKIASSSRVTAVIPCFPYARQDKKDK---SRAPISAKLVANMLS 507
GEINDNLMELLIMINACKIASSSRVTAVIPCFPYARQDKKDK SRAPISAKLVANMLS
Sbjct: 61 GEINDNLMELLIMINACKIASSSRVTAVIPCFPYARQDKKDKVSASRAPISAKLVANMLS 120
Query: 508 VAGADHIITMDLHASQIQGFFDIPVDNLYAEPAVLQWIRENIAEWRNCIIVSPDAGGAKR 687
VAGADHIITMDLHASQIQGFFDIPVDNLYAEPAVLQWIRENI +W+NCIIVSPDAGGAKR
Sbjct: 121 VAGADHIITMDLHASQIQGFFDIPVDNLYAEPAVLQWIRENITDWKNCIIVSPDAGGAKR 180
Query: 688 VTSIADRLNVEFALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLL 867
VTSIADRLNVEFALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLL
Sbjct: 181 VTSIADRLNVEFALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLL 240
Query: 868 SAGATKVYAILTHGIFSGPAISRINNAAFEAVVVTNTIPQEDKMKHCSKIQVIDISMILA 1047
SAGATKVYAILTHGIFSGPAISRINNAAFEAVVVTNTIPQEDKMKHCSKIQVIDISMILA
Sbjct: 241 SAGATKVYAILTHGIFSGPAISRINNAAFEAVVVTNTIPQEDKMKHCSKIQVIDISMILA 300
Query: 1048 EAIRRTHNGESVSYLFSHVPL 1110
EAIRRTHNGESVSYLFSHVPL
Sbjct: 301 EAIRRTHNGESVSYLFSHVPL 321
>ref|NP_001039654.1| ribose-phosphate pyrophosphokinase 1 [Bos taurus].
Length = 318
Score = 607 bits (1565), Expect = e-173
Identities = 305/318 (95%), Positives = 314/318 (98%)
Frame = +1
Query: 157 MPNIVLFSGSSHQDLSQRVADRLGLELGKVVTKKFSNQETSVEIGESVRGEDVYIIQSGC 336
MPNI +FSGSSHQDLSQ++ADRLGLELGKVVTKKFSNQET VEIGESVRGEDVYI+QSGC
Sbjct: 1 MPNIKIFSGSSHQDLSQKIADRLGLELGKVVTKKFSNQETCVEIGESVRGEDVYIVQSGC 60
Query: 337 GEINDNLMELLIMINACKIASSSRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAG 516
GEINDNLMELLIMINACKIAS+SRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAG
Sbjct: 61 GEINDNLMELLIMINACKIASASRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAG 120
Query: 517 ADHIITMDLHASQIQGFFDIPVDNLYAEPAVLQWIRENIAEWRNCIIVSPDAGGAKRVTS 696
ADHIITMDLHASQIQGFFDIPVDNLYAEPAVL+WIRENI+EWRNC IVSPDAGGAKRVTS
Sbjct: 121 ADHIITMDLHASQIQGFFDIPVDNLYAEPAVLKWIRENISEWRNCTIVSPDAGGAKRVTS 180
Query: 697 IADRLNVEFALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAG 876
IADRLNV+FALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAG
Sbjct: 181 IADRLNVDFALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAG 240
Query: 877 ATKVYAILTHGIFSGPAISRINNAAFEAVVVTNTIPQEDKMKHCSKIQVIDISMILAEAI 1056
AT+VYAILTHGIFSGPAISRINNA FEAVVVTNTIPQEDKMKHCSKIQVIDISMILAEAI
Sbjct: 241 ATRVYAILTHGIFSGPAISRINNACFEAVVVTNTIPQEDKMKHCSKIQVIDISMILAEAI 300
Query: 1057 RRTHNGESVSYLFSHVPL 1110
RRTHNGESVSYLFSHVPL
Sbjct: 301 RRTHNGESVSYLFSHVPL 318
>ref|NP_001095953.1| ribose-phosphate pyrophosphokinase 3 [Bos taurus].
Length = 329
Score = 552 bits (1422), Expect = e-157
Identities = 276/317 (87%), Positives = 298/317 (94%)
Frame = +1
Query: 160 PNIVLFSGSSHQDLSQRVADRLGLELGKVVTKKFSNQETSVEIGESVRGEDVYIIQSGCG 339
PNI +FSG SHQDLSQ++ADRLGLELGKVVTKK SNQET VEIGESV+GEDVYI+QSGCG
Sbjct: 13 PNIKIFSGRSHQDLSQKIADRLGLELGKVVTKKLSNQETCVEIGESVQGEDVYIVQSGCG 72
Query: 340 EINDNLMELLIMINACKIASSSRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAGA 519
EINDNLMELLIMINACKIAS+ RVTAVIPCFPYARQDK+ +SRAPISAKLVA+MLS AGA
Sbjct: 73 EINDNLMELLIMINACKIASAGRVTAVIPCFPYARQDKRGESRAPISAKLVADMLSTAGA 132
Query: 520 DHIITMDLHASQIQGFFDIPVDNLYAEPAVLQWIRENIAEWRNCIIVSPDAGGAKRVTSI 699
DHIITMDLHASQIQGFFDIPVDNL AEPAVL+WI+E I++WR+C IVSPDAG KR TSI
Sbjct: 133 DHIITMDLHASQIQGFFDIPVDNLCAEPAVLKWIKEQISDWRSCTIVSPDAGEVKRATSI 192
Query: 700 ADRLNVEFALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAGA 879
ADRLNV+FALIHK RKKA EVD MVLVGDVK RVAILVDDMADTCGTICHAADKLLSAGA
Sbjct: 193 ADRLNVDFALIHKVRKKAGEVDGMVLVGDVKYRVAILVDDMADTCGTICHAADKLLSAGA 252
Query: 880 TKVYAILTHGIFSGPAISRINNAAFEAVVVTNTIPQEDKMKHCSKIQVIDISMILAEAIR 1059
T+VYAILTHGIFSGPA++RIN+A FEAVVVTNT+PQEDKMKHCSKIQVIDISMILAEAIR
Sbjct: 253 TRVYAILTHGIFSGPAVTRINSAGFEAVVVTNTVPQEDKMKHCSKIQVIDISMILAEAIR 312
Query: 1060 RTHNGESVSYLFSHVPL 1110
R H+G+SVSYLFSHVPL
Sbjct: 313 RIHSGKSVSYLFSHVPL 329
>ref|NP_001074982.1| phosphoribosyl pyrophosphate synthase-associated protein 2 [Bos
taurus].
Length = 369
Score = 275 bits (703), Expect = 1e-73
Identities = 154/353 (43%), Positives = 219/353 (62%), Gaps = 34/353 (9%)
Frame = +1
Query: 154 TMPNIVLFSGSSHQ---DLSQRVADRLGLELGKVVTKKFSNQETSVEIGESVRGEDVYII 324
T +VLFS +S+ +LS+++A+RLG+E+GKV + ++ET V+I ESVRG+DV+II
Sbjct: 16 TKGGLVLFSANSNSSCMELSKKIAERLGVEMGKVQVYQEPDRETRVQIQESVRGKDVFII 75
Query: 325 QSGCGEINDNLMELLIMINACKIASSSRVTAVIPCFPYARQDKKDKSRAPISAKLVANML 504
Q+ ++N +MELLIM+ ACK + + + V+P FPY++Q K K R I +KL+A+M+
Sbjct: 76 QTVSKDVNTTIMELLIMVYACKTSCAKSIIGVVPYFPYSKQCKMRK-RGSIVSKLLASMM 134
Query: 505 SVAGADHIITMDLHASQIQGFFDIPVDNLYAEPAVLQWIRENIAEWRNCIIVSPDAGGAK 684
AG H+ITMDLH +IQGFF+IPVDNL A P +LQ+I+E I ++RN +IV+ AK
Sbjct: 135 CKAGLTHLITMDLHQKEIQGFFNIPVDNLRASPFLLQYIQEEIPDYRNAVIVAKSPASAK 194
Query: 685 RVTSIADRLNVEFALIHKERKKA-------------------------------NEVDRM 771
R S A+RL + A+IH E + A E +
Sbjct: 195 RAQSFAERLRLGIAVIHGEAQDAESDLVDGRHSPPMVRSAAAIHPSLEIPMLIPKEKPPI 254
Query: 772 VLVGDVKDRVAILVDDMADTCGTICHAADKLLSAGATKVYAILTHGIFSGPAISRINNAA 951
+VGDV R+AI+VDD+ D + AA+ L GA K++ + THG+ S A I +A
Sbjct: 255 TVVGDVGGRIAIIVDDIIDDVDSFLAAAETLKERGAYKIFVMATHGLLSSDAPLLIEESA 314
Query: 952 FEAVVVTNTIPQEDKMKHCSKIQVIDISMILAEAIRRTHNGESVSYLFSHVPL 1110
+ VVVTNTIP E + C KI+ +DISM L+EAIRR HNGES+SYLF ++ L
Sbjct: 315 IDEVVVTNTIPHEIQKLQCPKIKTVDISMTLSEAIRRIHNGESMSYLFRNIGL 367
>ref|XP_001790357.1| PREDICTED: phosphoribosyl pyrophosphate synthetase-associated protein
1 [Bos taurus].
Length = 385
Score = 270 bits (689), Expect = 4e-72
Identities = 161/376 (42%), Positives = 222/376 (59%), Gaps = 30/376 (7%)
Frame = +1
Query: 67 PPLALSRSRRGLPCFCRLCRPAPLVAPRATMPNIVLFSGSSHQDLSQRVADRLGLELGKV 246
PPL++S + R P C RPA + A R S ++ +L++R+ +RLG ELGK
Sbjct: 9 PPLSVSSAFRA-PRACPAARPA-MNAARTGYRVFSANSTAACTELAKRITERLGAELGKS 66
Query: 247 VTKKFSNQETSVEIGESVRGEDVYIIQSGCGEINDNLMELLIMINACKIASSSRVTAVIP 426
V + +N ET VEI ESVRG+D++IIQ+ ++N +MELLIM A K A + + VIP
Sbjct: 67 VVYQETNGETRVEIQESVRGQDIFIIQTIPRDVNTAVMELLIMAYALKTACARNIIGVIP 126
Query: 427 CFPYARQDKKDKSRAPISAKLVANMLSVAGADHIITMDLHASQIQGFFDIPVDNLYAEPA 606
FPY++Q K K R I KL+A+ML+ AG HIITMDLH +IQGFF PVDNL A P
Sbjct: 127 YFPYSKQSKMRK-RGSIVCKLLASMLAKAGLTHIITMDLHQKEIQGFFSFPVDNLRASPF 185
Query: 607 VLQWIRENIAEWRNCIIVSPDAGGAKRVTSIADRLNVEFALIHKERK------------- 747
+LQ+I+E I +RN +IV+ AKR S A+RL + A+IH E +
Sbjct: 186 LLQYIQEEIPNYRNAVIVAKSPDAAKRAQSYAERLRLGLAVIHGEAQCAEMDMDDGRHSP 245
Query: 748 -----------------KANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAG 876
A E + +VGDV R+AI+VDD+ D + AA+ L G
Sbjct: 246 PMVKNATVHPGLELPLMMAKEKPPITVVGDVGGRIAIIVDDIIDDVESFVAAAEILKERG 305
Query: 877 ATKVYAILTHGIFSGPAISRINNAAFEAVVVTNTIPQEDKMKHCSKIQVIDISMILAEAI 1056
A ++Y + THGI S A I ++ + VVVTNT+P E + C KI+ +DIS+IL+EAI
Sbjct: 306 AYRIYVMATHGILSAEAPRLIEESSIDEVVVTNTVPHEVQKLQCPKIKTVDISLILSEAI 365
Query: 1057 RRTHNGESVSYLFSHV 1104
RR HNGES++YLF ++
Sbjct: 366 RRIHNGESMAYLFRNI 381
>ref|NP_001070325.1| phosphoribosyl pyrophosphate synthase-associated protein 1 [Bos
taurus].
Length = 356
Score = 262 bits (670), Expect = 7e-70
Identities = 148/333 (44%), Positives = 203/333 (60%), Gaps = 30/333 (9%)
Frame = +1
Query: 196 DLSQRVADRLGLELGKVVTKKFSNQETSVEIGESVRGEDVYIIQSGCGEINDNLMELLIM 375
+L++R+ +RLG ELGK V + +N ET VEI ESVRG+D++IIQ+ ++N +MELLIM
Sbjct: 21 ELAKRITERLGAELGKSVVYQETNGETRVEIQESVRGQDIFIIQTIPRDVNTAVMELLIM 80
Query: 376 INACKIASSSRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAGADHIITMDLHASQ 555
A K A + + VIP FPY++Q K K R I KL+A+ML+ AG HIITMDLH +
Sbjct: 81 AYALKTACARNIIGVIPYFPYSKQSKMRK-RGSIVCKLLASMLAKAGLTHIITMDLHQKE 139
Query: 556 IQGFFDIPVDNLYAEPAVLQWIRENIAEWRNCIIVSPDAGGAKRVTSIADRLNVEFALIH 735
IQGFF PVDNL A P +LQ+I+E I +RN +IV+ AKR S A+RL + A+IH
Sbjct: 140 IQGFFSFPVDNLRASPFLLQYIQEEIPNYRNAVIVAKSPDAAKRAQSYAERLRLGLAVIH 199
Query: 736 KERK------------------------------KANEVDRMVLVGDVKDRVAILVDDMA 825
E + A E + +VGDV R+AI+VDD+
Sbjct: 200 GEAQCAEMDMDDGRHSPPMVKNATVHPGLELPLMMAKEKPPITVVGDVGGRIAIIVDDII 259
Query: 826 DTCGTICHAADKLLSAGATKVYAILTHGIFSGPAISRINNAAFEAVVVTNTIPQEDKMKH 1005
D + AA+ L GA ++Y + THGI S A I ++ + VVVTNT+P E +
Sbjct: 260 DDVESFVAAAEILKERGAYRIYVMATHGILSAEAPRLIEESSIDEVVVTNTVPHEVQKLQ 319
Query: 1006 CSKIQVIDISMILAEAIRRTHNGESVSYLFSHV 1104
C KI+ +DIS+IL+EAIRR HNGES++YLF ++
Sbjct: 320 CPKIKTVDISLILSEAIRRIHNGESMAYLFRNI 352
>ref|XP_002700484.1| PREDICTED: PRPS2 protein-like [Bos taurus].
Length = 349
Score = 240 bits (613), Expect = 3e-63
Identities = 122/133 (91%), Positives = 124/133 (93%)
Frame = +1
Query: 64 CPPLALSRSRRGLPCFCRLCRPAPLVAPRATMPNIVLFSGSSHQDLSQRVADRLGLELGK 243
CPP+ALSRSR LP RL RPAPL PR TMPNIVLFSGSSHQDLSQRVADRLGLELGK
Sbjct: 216 CPPVALSRSRHRLPSDRRLSRPAPLGTPRPTMPNIVLFSGSSHQDLSQRVADRLGLELGK 275
Query: 244 VVTKKFSNQETSVEIGESVRGEDVYIIQSGCGEINDNLMELLIMINACKIASSSRVTAVI 423
V+TKKFSNQETSVEIGESVRGEDVYIIQSGCGEINDNLMELLIMINACKIASSSRVTAVI
Sbjct: 276 VITKKFSNQETSVEIGESVRGEDVYIIQSGCGEINDNLMELLIMINACKIASSSRVTAVI 335
Query: 424 PCFPYARQDKKDK 462
PCFPYARQDKKDK
Sbjct: 336 PCFPYARQDKKDK 348
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 67,813,024
Number of extensions: 1772618
Number of successful extensions: 5158
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 5149
Number of HSP's successfully gapped: 9
Length of query: 619
Length of database: 17,681,374
Length adjustment: 108
Effective length of query: 511
Effective length of database: 14,107,870
Effective search space: 7209121570
Effective search space used: 7209121570
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002551
(1859 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_534058.2| PREDICTED: similar to Ribose-phosphate pyrophos... 622 e-178
Alignment gi|XP_856623.1| PREDICTED: similar to Ribose-phosphate pyrophos... 622 e-178
Alignment gi|XP_848657.1| PREDICTED: similar to Ribose-phosphate pyrophos... 615 e-176
Alignment gi|XP_856746.1| PREDICTED: similar to Ribose-phosphate pyrophos... 610 e-174
Alignment gi|XP_850853.1| PREDICTED: similar to Ribose-phosphate pyrophos... 607 e-173
Alignment gi|XP_862484.1| PREDICTED: similar to Ribose-phosphate pyrophos... 600 e-171
Alignment gi|XP_856827.1| PREDICTED: similar to Ribose-phosphate pyrophos... 565 e-161
Alignment gi|XP_856670.1| PREDICTED: similar to Ribose-phosphate pyrophos... 544 e-154
Alignment gi|XP_862430.1| PREDICTED: similar to Ribose-phosphate pyrophos... 529 e-150
Alignment gi|XP_544812.2| PREDICTED: similar to Ribose-phosphate pyrophos... 493 e-139
>ref|XP_534058.2| PREDICTED: similar to Ribose-phosphate pyrophosphokinase II
(Phosphoribosyl pyrophosphate synthetase II) (PRS-II)
isoform 1 [Canis familiaris].
Length = 318
Score = 622 bits (1603), Expect = e-178
Identities = 317/318 (99%), Positives = 317/318 (99%)
Frame = +1
Query: 157 MPNIVLFSGSSHQDLSQRVADRLGLELGKVVTKKFSNQETSVEIGESVRGEDVYIIQSGC 336
MPNIVLFSGSSHQDLSQRVADRLGLELGKVVTKKFSNQETSVEIGESVRGEDVYIIQSGC
Sbjct: 1 MPNIVLFSGSSHQDLSQRVADRLGLELGKVVTKKFSNQETSVEIGESVRGEDVYIIQSGC 60
Query: 337 GEINDNLMELLIMINACKIASSSRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAG 516
GEINDNLMELLIMINACKIASSSRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAG
Sbjct: 61 GEINDNLMELLIMINACKIASSSRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAG 120
Query: 517 ADHIITMDLHASQIQGFFDIPVDNLYAEPAVLQWIRENIAEWRNCIIVSPDAGGAKRVTS 696
ADHIITMDLHASQIQGFFDIPVDNLYAEPAVLQWIRENIAEWRNCIIVSPDAGGAKRVTS
Sbjct: 121 ADHIITMDLHASQIQGFFDIPVDNLYAEPAVLQWIRENIAEWRNCIIVSPDAGGAKRVTS 180
Query: 697 IADRLNVEFALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAG 876
IADRLNVEFALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAG
Sbjct: 181 IADRLNVEFALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAG 240
Query: 877 ATKVYAILTHGIFSGPAISRINNAAFEAVVVTNTIPQEDKMKHCSKIQVIDISMILAEAI 1056
ATKVYAILTHGIFSGPAISRINNAAFEAVVVTNTIPQEDKMKHC KIQVIDISMILAEAI
Sbjct: 241 ATKVYAILTHGIFSGPAISRINNAAFEAVVVTNTIPQEDKMKHCPKIQVIDISMILAEAI 300
Query: 1057 RRTHNGESVSYLFSHVPL 1110
RRTHNGESVSYLFSHVPL
Sbjct: 301 RRTHNGESVSYLFSHVPL 318
>ref|XP_856623.1| PREDICTED: similar to Ribose-phosphate pyrophosphokinase II
(Phosphoribosyl pyrophosphate synthetase II) (PRS-II)
isoform 4 [Canis familiaris].
Length = 318
Score = 622 bits (1603), Expect = e-178
Identities = 317/318 (99%), Positives = 317/318 (99%)
Frame = +1
Query: 157 MPNIVLFSGSSHQDLSQRVADRLGLELGKVVTKKFSNQETSVEIGESVRGEDVYIIQSGC 336
MPNIVLFSGSSHQDLSQRVADRLGLELGKVVTKKFSNQETSVEIGESVRGEDVYIIQSGC
Sbjct: 1 MPNIVLFSGSSHQDLSQRVADRLGLELGKVVTKKFSNQETSVEIGESVRGEDVYIIQSGC 60
Query: 337 GEINDNLMELLIMINACKIASSSRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAG 516
GEINDNLMELLIMINACKIASSSRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAG
Sbjct: 61 GEINDNLMELLIMINACKIASSSRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAG 120
Query: 517 ADHIITMDLHASQIQGFFDIPVDNLYAEPAVLQWIRENIAEWRNCIIVSPDAGGAKRVTS 696
ADHIITMDLHASQIQGFFDIPVDNLYAEPAVLQWIRENIAEWRNCIIVSPDAGGAKRVTS
Sbjct: 121 ADHIITMDLHASQIQGFFDIPVDNLYAEPAVLQWIRENIAEWRNCIIVSPDAGGAKRVTS 180
Query: 697 IADRLNVEFALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAG 876
IADRLNVEFALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAG
Sbjct: 181 IADRLNVEFALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAG 240
Query: 877 ATKVYAILTHGIFSGPAISRINNAAFEAVVVTNTIPQEDKMKHCSKIQVIDISMILAEAI 1056
ATKVYAILTHGIFSGPAISRINNAAFEAVVVTNTIPQEDKMKHC KIQVIDISMILAEAI
Sbjct: 241 ATKVYAILTHGIFSGPAISRINNAAFEAVVVTNTIPQEDKMKHCPKIQVIDISMILAEAI 300
Query: 1057 RRTHNGESVSYLFSHVPL 1110
RRTHNGESVSYLFSHVPL
Sbjct: 301 RRTHNGESVSYLFSHVPL 318
>ref|XP_848657.1| PREDICTED: similar to Ribose-phosphate pyrophosphokinase II
(Phosphoribosyl pyrophosphate synthetase II) (PRS-II)
isoform 3 [Canis familiaris].
Length = 325
Score = 615 bits (1585), Expect = e-176
Identities = 317/325 (97%), Positives = 317/325 (97%), Gaps = 7/325 (2%)
Frame = +1
Query: 157 MPNIVLFSGSSHQDLSQRVADRLGLELGKVVTKKFSNQETSVEIGESVRGEDVYIIQSGC 336
MPNIVLFSGSSHQDLSQRVADRLGLELGKVVTKKFSNQETSVEIGESVRGEDVYIIQSGC
Sbjct: 1 MPNIVLFSGSSHQDLSQRVADRLGLELGKVVTKKFSNQETSVEIGESVRGEDVYIIQSGC 60
Query: 337 GEINDNLMELLIMINACKIASSSRVTAVIPCFPYARQDKKDK-------SRAPISAKLVA 495
GEINDNLMELLIMINACKIASSSRVTAVIPCFPYARQDKKDK SRAPISAKLVA
Sbjct: 61 GEINDNLMELLIMINACKIASSSRVTAVIPCFPYARQDKKDKFGEIERWSRAPISAKLVA 120
Query: 496 NMLSVAGADHIITMDLHASQIQGFFDIPVDNLYAEPAVLQWIRENIAEWRNCIIVSPDAG 675
NMLSVAGADHIITMDLHASQIQGFFDIPVDNLYAEPAVLQWIRENIAEWRNCIIVSPDAG
Sbjct: 121 NMLSVAGADHIITMDLHASQIQGFFDIPVDNLYAEPAVLQWIRENIAEWRNCIIVSPDAG 180
Query: 676 GAKRVTSIADRLNVEFALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAA 855
GAKRVTSIADRLNVEFALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAA
Sbjct: 181 GAKRVTSIADRLNVEFALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAA 240
Query: 856 DKLLSAGATKVYAILTHGIFSGPAISRINNAAFEAVVVTNTIPQEDKMKHCSKIQVIDIS 1035
DKLLSAGATKVYAILTHGIFSGPAISRINNAAFEAVVVTNTIPQEDKMKHC KIQVIDIS
Sbjct: 241 DKLLSAGATKVYAILTHGIFSGPAISRINNAAFEAVVVTNTIPQEDKMKHCPKIQVIDIS 300
Query: 1036 MILAEAIRRTHNGESVSYLFSHVPL 1110
MILAEAIRRTHNGESVSYLFSHVPL
Sbjct: 301 MILAEAIRRTHNGESVSYLFSHVPL 325
>ref|XP_856746.1| PREDICTED: similar to Ribose-phosphate pyrophosphokinase II
(Phosphoribosyl pyrophosphate synthetase II) (PRS-II)
(PPRibP) isoform 6 [Canis familiaris].
Length = 337
Score = 610 bits (1573), Expect = e-174
Identities = 317/337 (94%), Positives = 317/337 (94%), Gaps = 19/337 (5%)
Frame = +1
Query: 157 MPNIVLFSGSSHQDLSQRVADRLGLELGKVVTKKFSNQETSVEIGESVRGEDVYIIQSGC 336
MPNIVLFSGSSHQDLSQRVADRLGLELGKVVTKKFSNQETSVEIGESVRGEDVYIIQSGC
Sbjct: 1 MPNIVLFSGSSHQDLSQRVADRLGLELGKVVTKKFSNQETSVEIGESVRGEDVYIIQSGC 60
Query: 337 GEINDNLMELLIMINACKIASSSRVTAVIPCFPYARQDKKDK------------------ 462
GEINDNLMELLIMINACKIASSSRVTAVIPCFPYARQDKKDK
Sbjct: 61 GEINDNLMELLIMINACKIASSSRVTAVIPCFPYARQDKKDKLCAAEDVKISKTNYFWEP 120
Query: 463 -SRAPISAKLVANMLSVAGADHIITMDLHASQIQGFFDIPVDNLYAEPAVLQWIRENIAE 639
SRAPISAKLVANMLSVAGADHIITMDLHASQIQGFFDIPVDNLYAEPAVLQWIRENIAE
Sbjct: 121 RSRAPISAKLVANMLSVAGADHIITMDLHASQIQGFFDIPVDNLYAEPAVLQWIRENIAE 180
Query: 640 WRNCIIVSPDAGGAKRVTSIADRLNVEFALIHKERKKANEVDRMVLVGDVKDRVAILVDD 819
WRNCIIVSPDAGGAKRVTSIADRLNVEFALIHKERKKANEVDRMVLVGDVKDRVAILVDD
Sbjct: 181 WRNCIIVSPDAGGAKRVTSIADRLNVEFALIHKERKKANEVDRMVLVGDVKDRVAILVDD 240
Query: 820 MADTCGTICHAADKLLSAGATKVYAILTHGIFSGPAISRINNAAFEAVVVTNTIPQEDKM 999
MADTCGTICHAADKLLSAGATKVYAILTHGIFSGPAISRINNAAFEAVVVTNTIPQEDKM
Sbjct: 241 MADTCGTICHAADKLLSAGATKVYAILTHGIFSGPAISRINNAAFEAVVVTNTIPQEDKM 300
Query: 1000 KHCSKIQVIDISMILAEAIRRTHNGESVSYLFSHVPL 1110
KHC KIQVIDISMILAEAIRRTHNGESVSYLFSHVPL
Sbjct: 301 KHCPKIQVIDISMILAEAIRRTHNGESVSYLFSHVPL 337
>ref|XP_850853.1| PREDICTED: similar to Ribose-phosphate pyrophosphokinase I
(Phosphoribosyl pyrophosphate synthetase I) (PRS-I)
isoform 2 [Canis familiaris].
Length = 318
Score = 607 bits (1565), Expect = e-173
Identities = 305/318 (95%), Positives = 314/318 (98%)
Frame = +1
Query: 157 MPNIVLFSGSSHQDLSQRVADRLGLELGKVVTKKFSNQETSVEIGESVRGEDVYIIQSGC 336
MPNI +FSGSSHQDLSQ++ADRLGLELGKVVTKKFSNQET VEIGESVRGEDVYI+QSGC
Sbjct: 1 MPNIKIFSGSSHQDLSQKIADRLGLELGKVVTKKFSNQETCVEIGESVRGEDVYIVQSGC 60
Query: 337 GEINDNLMELLIMINACKIASSSRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAG 516
GEINDNLMELLIMINACKIAS+SRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAG
Sbjct: 61 GEINDNLMELLIMINACKIASASRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAG 120
Query: 517 ADHIITMDLHASQIQGFFDIPVDNLYAEPAVLQWIRENIAEWRNCIIVSPDAGGAKRVTS 696
ADHIITMDLHASQIQGFFDIPVDNLYAEPAVL+WIRENI+EWRNC IVSPDAGGAKRVTS
Sbjct: 121 ADHIITMDLHASQIQGFFDIPVDNLYAEPAVLKWIRENISEWRNCTIVSPDAGGAKRVTS 180
Query: 697 IADRLNVEFALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAG 876
IADRLNV+FALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAG
Sbjct: 181 IADRLNVDFALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAG 240
Query: 877 ATKVYAILTHGIFSGPAISRINNAAFEAVVVTNTIPQEDKMKHCSKIQVIDISMILAEAI 1056
AT+VYAILTHGIFSGPAISRINNA FEAVVVTNTIPQEDKMKHCSKIQVIDISMILAEAI
Sbjct: 241 ATRVYAILTHGIFSGPAISRINNACFEAVVVTNTIPQEDKMKHCSKIQVIDISMILAEAI 300
Query: 1057 RRTHNGESVSYLFSHVPL 1110
RRTHNGESVSYLFSHVPL
Sbjct: 301 RRTHNGESVSYLFSHVPL 318
>ref|XP_862484.1| PREDICTED: similar to Ribose-phosphate pyrophosphokinase I
(Phosphoribosyl pyrophosphate synthetase I) (PRS-I)
isoform 4 [Canis familiaris].
Length = 326
Score = 600 bits (1546), Expect = e-171
Identities = 305/326 (93%), Positives = 314/326 (96%), Gaps = 8/326 (2%)
Frame = +1
Query: 157 MPNIVLFSGSSHQDLSQRVADRLGLELGKVVTKKFSNQETSVEIGESVRGEDVYIIQSGC 336
MPNI +FSGSSHQDLSQ++ADRLGLELGKVVTKKFSNQET VEIGESVRGEDVYI+QSGC
Sbjct: 1 MPNIKIFSGSSHQDLSQKIADRLGLELGKVVTKKFSNQETCVEIGESVRGEDVYIVQSGC 60
Query: 337 GEINDNLMELLIMINACKIASSSRVTAVIPCFPYARQDKKDK--------SRAPISAKLV 492
GEINDNLMELLIMINACKIAS+SRVTAVIPCFPYARQDKKDK SRAPISAKLV
Sbjct: 61 GEINDNLMELLIMINACKIASASRVTAVIPCFPYARQDKKDKKCFLTKWISRAPISAKLV 120
Query: 493 ANMLSVAGADHIITMDLHASQIQGFFDIPVDNLYAEPAVLQWIRENIAEWRNCIIVSPDA 672
ANMLSVAGADHIITMDLHASQIQGFFDIPVDNLYAEPAVL+WIRENI+EWRNC IVSPDA
Sbjct: 121 ANMLSVAGADHIITMDLHASQIQGFFDIPVDNLYAEPAVLKWIRENISEWRNCTIVSPDA 180
Query: 673 GGAKRVTSIADRLNVEFALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICHA 852
GGAKRVTSIADRLNV+FALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICHA
Sbjct: 181 GGAKRVTSIADRLNVDFALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICHA 240
Query: 853 ADKLLSAGATKVYAILTHGIFSGPAISRINNAAFEAVVVTNTIPQEDKMKHCSKIQVIDI 1032
ADKLLSAGAT+VYAILTHGIFSGPAISRINNA FEAVVVTNTIPQEDKMKHCSKIQVIDI
Sbjct: 241 ADKLLSAGATRVYAILTHGIFSGPAISRINNACFEAVVVTNTIPQEDKMKHCSKIQVIDI 300
Query: 1033 SMILAEAIRRTHNGESVSYLFSHVPL 1110
SMILAEAIRRTHNGESVSYLFSHVPL
Sbjct: 301 SMILAEAIRRTHNGESVSYLFSHVPL 326
>ref|XP_856827.1| PREDICTED: similar to Ribose-phosphate pyrophosphokinase II
(Phosphoribosyl pyrophosphate synthetase II) (PRS-II)
isoform 8 [Canis familiaris].
Length = 298
Score = 565 bits (1457), Expect = e-161
Identities = 287/290 (98%), Positives = 288/290 (99%)
Frame = +1
Query: 157 MPNIVLFSGSSHQDLSQRVADRLGLELGKVVTKKFSNQETSVEIGESVRGEDVYIIQSGC 336
MPNIVLFSGSSHQDLSQRVADRLGLELGKVVTKKFSNQETSVEIGESVRGEDVYIIQSGC
Sbjct: 1 MPNIVLFSGSSHQDLSQRVADRLGLELGKVVTKKFSNQETSVEIGESVRGEDVYIIQSGC 60
Query: 337 GEINDNLMELLIMINACKIASSSRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAG 516
GEINDNLMELLIMINACKIASSSRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAG
Sbjct: 61 GEINDNLMELLIMINACKIASSSRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAG 120
Query: 517 ADHIITMDLHASQIQGFFDIPVDNLYAEPAVLQWIRENIAEWRNCIIVSPDAGGAKRVTS 696
ADHIITMDLHASQIQGFFDIPVDNLYAEPAVLQWIRENIAEWRNCIIVSPDAGGAKRVTS
Sbjct: 121 ADHIITMDLHASQIQGFFDIPVDNLYAEPAVLQWIRENIAEWRNCIIVSPDAGGAKRVTS 180
Query: 697 IADRLNVEFALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAG 876
IADRLNVEFALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAG
Sbjct: 181 IADRLNVEFALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAG 240
Query: 877 ATKVYAILTHGIFSGPAISRINNAAFEAVVVTNTIPQEDKMKHCSKIQVI 1026
ATKVYAILTHGIFSGPAISRINNAAFEAVVVTNTIPQEDKMKHC KIQ +
Sbjct: 241 ATKVYAILTHGIFSGPAISRINNAAFEAVVVTNTIPQEDKMKHCPKIQFV 290
>ref|XP_856670.1| PREDICTED: similar to Ribose-phosphate pyrophosphokinase II
(Phosphoribosyl pyrophosphate synthetase II) (PRS-II)
(PPRibP) isoform 5 [Canis familiaris].
Length = 285
Score = 544 bits (1401), Expect = e-154
Identities = 284/318 (89%), Positives = 284/318 (89%)
Frame = +1
Query: 157 MPNIVLFSGSSHQDLSQRVADRLGLELGKVVTKKFSNQETSVEIGESVRGEDVYIIQSGC 336
MPNIVLFSGSSHQDLSQRVADRLGLELGKVVTKKFSNQETSVEIGESVRGEDVYIIQSGC
Sbjct: 1 MPNIVLFSGSSHQDLSQRVADRLGLELGKVVTKKFSNQETSVEIGESVRGEDVYIIQSGC 60
Query: 337 GEINDNLMELLIMINACKIASSSRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAG 516
GEINDNLMELLIMINACKIASSSRVTAVIPCFPYARQDKKDK
Sbjct: 61 GEINDNLMELLIMINACKIASSSRVTAVIPCFPYARQDKKDK------------------ 102
Query: 517 ADHIITMDLHASQIQGFFDIPVDNLYAEPAVLQWIRENIAEWRNCIIVSPDAGGAKRVTS 696
GFFDIPVDNLYAEPAVLQWIRENIAEWRNCIIVSPDAGGAKRVTS
Sbjct: 103 ---------------GFFDIPVDNLYAEPAVLQWIRENIAEWRNCIIVSPDAGGAKRVTS 147
Query: 697 IADRLNVEFALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAG 876
IADRLNVEFALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAG
Sbjct: 148 IADRLNVEFALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAG 207
Query: 877 ATKVYAILTHGIFSGPAISRINNAAFEAVVVTNTIPQEDKMKHCSKIQVIDISMILAEAI 1056
ATKVYAILTHGIFSGPAISRINNAAFEAVVVTNTIPQEDKMKHC KIQVIDISMILAEAI
Sbjct: 208 ATKVYAILTHGIFSGPAISRINNAAFEAVVVTNTIPQEDKMKHCPKIQVIDISMILAEAI 267
Query: 1057 RRTHNGESVSYLFSHVPL 1110
RRTHNGESVSYLFSHVPL
Sbjct: 268 RRTHNGESVSYLFSHVPL 285
>ref|XP_862430.1| PREDICTED: similar to Ribose-phosphate pyrophosphokinase I
(Phosphoribosyl pyrophosphate synthetase I) (PRS-I)
isoform 3 [Canis familiaris].
Length = 285
Score = 529 bits (1363), Expect = e-150
Identities = 272/318 (85%), Positives = 281/318 (88%)
Frame = +1
Query: 157 MPNIVLFSGSSHQDLSQRVADRLGLELGKVVTKKFSNQETSVEIGESVRGEDVYIIQSGC 336
MPNI +FSGSSHQDLSQ++ADRLGLELGKVVTKKFSNQET VEIGESVRGEDVYI+QSGC
Sbjct: 1 MPNIKIFSGSSHQDLSQKIADRLGLELGKVVTKKFSNQETCVEIGESVRGEDVYIVQSGC 60
Query: 337 GEINDNLMELLIMINACKIASSSRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAG 516
GEINDNLMELLIMINACKIAS+SRVTAVIPCFPYARQDKKDK
Sbjct: 61 GEINDNLMELLIMINACKIASASRVTAVIPCFPYARQDKKDK------------------ 102
Query: 517 ADHIITMDLHASQIQGFFDIPVDNLYAEPAVLQWIRENIAEWRNCIIVSPDAGGAKRVTS 696
GFFDIPVDNLYAEPAVL+WIRENI+EWRNC IVSPDAGGAKRVTS
Sbjct: 103 ---------------GFFDIPVDNLYAEPAVLKWIRENISEWRNCTIVSPDAGGAKRVTS 147
Query: 697 IADRLNVEFALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAG 876
IADRLNV+FALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAG
Sbjct: 148 IADRLNVDFALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAG 207
Query: 877 ATKVYAILTHGIFSGPAISRINNAAFEAVVVTNTIPQEDKMKHCSKIQVIDISMILAEAI 1056
AT+VYAILTHGIFSGPAISRINNA FEAVVVTNTIPQEDKMKHCSKIQVIDISMILAEAI
Sbjct: 208 ATRVYAILTHGIFSGPAISRINNACFEAVVVTNTIPQEDKMKHCSKIQVIDISMILAEAI 267
Query: 1057 RRTHNGESVSYLFSHVPL 1110
RRTHNGESVSYLFSHVPL
Sbjct: 268 RRTHNGESVSYLFSHVPL 285
>ref|XP_544812.2| PREDICTED: similar to Ribose-phosphate pyrophosphokinase I
(Phosphoribosyl pyrophosphate synthetase I) (PRS-I)
[Canis familiaris].
Length = 340
Score = 493 bits (1268), Expect = e-139
Identities = 247/302 (81%), Positives = 273/302 (90%)
Frame = +1
Query: 157 MPNIVLFSGSSHQDLSQRVADRLGLELGKVVTKKFSNQETSVEIGESVRGEDVYIIQSGC 336
MPN+ +FSGSSHQDLSQ++ADRLGLELGKVVTKKFSNQET VEIGE VRGEDVYI+QSGC
Sbjct: 1 MPNMKIFSGSSHQDLSQKIADRLGLELGKVVTKKFSNQETCVEIGEGVRGEDVYIVQSGC 60
Query: 337 GEINDNLMELLIMINACKIASSSRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAG 516
GEI+DNLMELLIMINACKIAS+SRVTAVIPCFPYARQDKK+KS APISAKLVA+ML V G
Sbjct: 61 GEISDNLMELLIMINACKIASASRVTAVIPCFPYARQDKKEKSPAPISAKLVADMLRVEG 120
Query: 517 ADHIITMDLHASQIQGFFDIPVDNLYAEPAVLQWIRENIAEWRNCIIVSPDAGGAKRVTS 696
AD IIT+DL ASQIQGFFD+PVDNLYA PAVLQWIRE+++EWR+C IVSPDAGGAK V S
Sbjct: 121 ADRIITVDLQASQIQGFFDVPVDNLYAAPAVLQWIRESVSEWRDCTIVSPDAGGAKTVAS 180
Query: 697 IADRLNVEFALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAG 876
IADRLNV FA +H+ RKKA+EVDR+VLVGDVKDRVAILVDDMADTCGTIC AADKLLSAG
Sbjct: 181 IADRLNVHFAPVHRGRKKADEVDRVVLVGDVKDRVAILVDDMADTCGTICLAADKLLSAG 240
Query: 877 ATKVYAILTHGIFSGPAISRINNAAFEAVVVTNTIPQEDKMKHCSKIQVIDISMILAEAI 1056
++VYA+LTHGI SGPAISRIN+A FEAVVVTNTIPQEDK KHCSKIQ ++ +
Sbjct: 241 DSRVYAVLTHGILSGPAISRINSACFEAVVVTNTIPQEDKTKHCSKIQADTLAGCRPGVL 300
Query: 1057 RR 1062
RR
Sbjct: 301 RR 302
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 70,685,986
Number of extensions: 1828793
Number of successful extensions: 5511
Number of sequences better than 1.0e-05: 29
Number of HSP's gapped: 5484
Number of HSP's successfully gapped: 41
Length of query: 619
Length of database: 18,874,504
Length adjustment: 109
Effective length of query: 510
Effective length of database: 15,240,880
Effective search space: 7772848800
Effective search space used: 7772848800
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002551
(1859 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_002756.1| ribose-phosphate pyrophosphokinase 2 isoform 2 ... 621 e-178
Alignment gi|NP_001034180.1| ribose-phosphate pyrophosphokinase 2 isoform... 616 e-176
Alignment gi|NP_002755.1| ribose-phosphate pyrophosphokinase 1 isoform 1 ... 607 e-173
Alignment gi|NP_787082.1| ribose-phosphate pyrophosphokinase 3 [Homo sapi... 577 e-164
Alignment gi|NP_002758.1| phosphoribosyl pyrophosphate synthase-associate... 282 6e-76
Alignment gi|NP_002757.2| phosphoribosyl pyrophosphate synthase-associate... 268 1e-71
Alignment gi|NP_001230869.1| phosphoribosyl pyrophosphate synthase-associ... 234 3e-61
Alignment gi|NP_001230865.1| phosphoribosyl pyrophosphate synthase-associ... 229 5e-60
Alignment gi|NP_001230870.1| phosphoribosyl pyrophosphate synthase-associ... 225 1e-58
Alignment gi|NP_001230871.1| phosphoribosyl pyrophosphate synthase-associ... 225 1e-58
>ref|NP_002756.1| ribose-phosphate pyrophosphokinase 2 isoform 2 [Homo sapiens].
Length = 318
Score = 621 bits (1602), Expect = e-178
Identities = 316/318 (99%), Positives = 318/318 (100%)
Frame = +1
Query: 157 MPNIVLFSGSSHQDLSQRVADRLGLELGKVVTKKFSNQETSVEIGESVRGEDVYIIQSGC 336
MPNIVLFSGSSHQDLSQRVADRLGLELGKVVTKKFSNQETSVEIGESVRGEDVYIIQSGC
Sbjct: 1 MPNIVLFSGSSHQDLSQRVADRLGLELGKVVTKKFSNQETSVEIGESVRGEDVYIIQSGC 60
Query: 337 GEINDNLMELLIMINACKIASSSRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAG 516
GEINDNLMELLIMINACKIASSSRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAG
Sbjct: 61 GEINDNLMELLIMINACKIASSSRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAG 120
Query: 517 ADHIITMDLHASQIQGFFDIPVDNLYAEPAVLQWIRENIAEWRNCIIVSPDAGGAKRVTS 696
ADHIITMDLHASQIQGFFDIPVDNLYAEPAVLQWIRENIAEW+NCIIVSPDAGGAKRVTS
Sbjct: 121 ADHIITMDLHASQIQGFFDIPVDNLYAEPAVLQWIRENIAEWKNCIIVSPDAGGAKRVTS 180
Query: 697 IADRLNVEFALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAG 876
IADRLNVEFALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAG
Sbjct: 181 IADRLNVEFALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAG 240
Query: 877 ATKVYAILTHGIFSGPAISRINNAAFEAVVVTNTIPQEDKMKHCSKIQVIDISMILAEAI 1056
ATKVYAILTHGIFSGPAISRINNAAFEAVVVTNTIPQEDKMKHC+KIQVIDISMILAEAI
Sbjct: 241 ATKVYAILTHGIFSGPAISRINNAAFEAVVVTNTIPQEDKMKHCTKIQVIDISMILAEAI 300
Query: 1057 RRTHNGESVSYLFSHVPL 1110
RRTHNGESVSYLFSHVPL
Sbjct: 301 RRTHNGESVSYLFSHVPL 318
>ref|NP_001034180.1| ribose-phosphate pyrophosphokinase 2 isoform 1 [Homo sapiens].
Length = 321
Score = 616 bits (1588), Expect = e-176
Identities = 316/321 (98%), Positives = 318/321 (99%), Gaps = 3/321 (0%)
Frame = +1
Query: 157 MPNIVLFSGSSHQDLSQRVADRLGLELGKVVTKKFSNQETSVEIGESVRGEDVYIIQSGC 336
MPNIVLFSGSSHQDLSQRVADRLGLELGKVVTKKFSNQETSVEIGESVRGEDVYIIQSGC
Sbjct: 1 MPNIVLFSGSSHQDLSQRVADRLGLELGKVVTKKFSNQETSVEIGESVRGEDVYIIQSGC 60
Query: 337 GEINDNLMELLIMINACKIASSSRVTAVIPCFPYARQDKKDK---SRAPISAKLVANMLS 507
GEINDNLMELLIMINACKIASSSRVTAVIPCFPYARQDKKDK SRAPISAKLVANMLS
Sbjct: 61 GEINDNLMELLIMINACKIASSSRVTAVIPCFPYARQDKKDKVGESRAPISAKLVANMLS 120
Query: 508 VAGADHIITMDLHASQIQGFFDIPVDNLYAEPAVLQWIRENIAEWRNCIIVSPDAGGAKR 687
VAGADHIITMDLHASQIQGFFDIPVDNLYAEPAVLQWIRENIAEW+NCIIVSPDAGGAKR
Sbjct: 121 VAGADHIITMDLHASQIQGFFDIPVDNLYAEPAVLQWIRENIAEWKNCIIVSPDAGGAKR 180
Query: 688 VTSIADRLNVEFALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLL 867
VTSIADRLNVEFALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLL
Sbjct: 181 VTSIADRLNVEFALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLL 240
Query: 868 SAGATKVYAILTHGIFSGPAISRINNAAFEAVVVTNTIPQEDKMKHCSKIQVIDISMILA 1047
SAGATKVYAILTHGIFSGPAISRINNAAFEAVVVTNTIPQEDKMKHC+KIQVIDISMILA
Sbjct: 241 SAGATKVYAILTHGIFSGPAISRINNAAFEAVVVTNTIPQEDKMKHCTKIQVIDISMILA 300
Query: 1048 EAIRRTHNGESVSYLFSHVPL 1110
EAIRRTHNGESVSYLFSHVPL
Sbjct: 301 EAIRRTHNGESVSYLFSHVPL 321
>ref|NP_002755.1| ribose-phosphate pyrophosphokinase 1 isoform 1 [Homo sapiens].
Length = 318
Score = 607 bits (1565), Expect = e-173
Identities = 305/318 (95%), Positives = 314/318 (98%)
Frame = +1
Query: 157 MPNIVLFSGSSHQDLSQRVADRLGLELGKVVTKKFSNQETSVEIGESVRGEDVYIIQSGC 336
MPNI +FSGSSHQDLSQ++ADRLGLELGKVVTKKFSNQET VEIGESVRGEDVYI+QSGC
Sbjct: 1 MPNIKIFSGSSHQDLSQKIADRLGLELGKVVTKKFSNQETCVEIGESVRGEDVYIVQSGC 60
Query: 337 GEINDNLMELLIMINACKIASSSRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAG 516
GEINDNLMELLIMINACKIAS+SRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAG
Sbjct: 61 GEINDNLMELLIMINACKIASASRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAG 120
Query: 517 ADHIITMDLHASQIQGFFDIPVDNLYAEPAVLQWIRENIAEWRNCIIVSPDAGGAKRVTS 696
ADHIITMDLHASQIQGFFDIPVDNLYAEPAVL+WIRENI+EWRNC IVSPDAGGAKRVTS
Sbjct: 121 ADHIITMDLHASQIQGFFDIPVDNLYAEPAVLKWIRENISEWRNCTIVSPDAGGAKRVTS 180
Query: 697 IADRLNVEFALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAG 876
IADRLNV+FALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAG
Sbjct: 181 IADRLNVDFALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAG 240
Query: 877 ATKVYAILTHGIFSGPAISRINNAAFEAVVVTNTIPQEDKMKHCSKIQVIDISMILAEAI 1056
AT+VYAILTHGIFSGPAISRINNA FEAVVVTNTIPQEDKMKHCSKIQVIDISMILAEAI
Sbjct: 241 ATRVYAILTHGIFSGPAISRINNACFEAVVVTNTIPQEDKMKHCSKIQVIDISMILAEAI 300
Query: 1057 RRTHNGESVSYLFSHVPL 1110
RRTHNGESVSYLFSHVPL
Sbjct: 301 RRTHNGESVSYLFSHVPL 318
>ref|NP_787082.1| ribose-phosphate pyrophosphokinase 3 [Homo sapiens].
Length = 318
Score = 577 bits (1487), Expect = e-164
Identities = 290/318 (91%), Positives = 307/318 (96%)
Frame = +1
Query: 157 MPNIVLFSGSSHQDLSQRVADRLGLELGKVVTKKFSNQETSVEIGESVRGEDVYIIQSGC 336
MPNI +FSGSSHQDLSQ++ADRLGLELGKVVTKKFSNQET VEI ESVRGEDVYI+QSGC
Sbjct: 1 MPNIKIFSGSSHQDLSQKIADRLGLELGKVVTKKFSNQETCVEIDESVRGEDVYIVQSGC 60
Query: 337 GEINDNLMELLIMINACKIASSSRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAG 516
GEIND+LMELLIMINACKIAS+SRVTAVIPCFPYARQDKKDKSR+PISAKLVANMLS+AG
Sbjct: 61 GEINDSLMELLIMINACKIASASRVTAVIPCFPYARQDKKDKSRSPISAKLVANMLSIAG 120
Query: 517 ADHIITMDLHASQIQGFFDIPVDNLYAEPAVLQWIRENIAEWRNCIIVSPDAGGAKRVTS 696
ADHIITMDLHASQIQGFFDIPVDNLYAEP VL+WIRENI EW+NCIIVSPDAGGAKRVTS
Sbjct: 121 ADHIITMDLHASQIQGFFDIPVDNLYAEPTVLKWIRENIPEWKNCIIVSPDAGGAKRVTS 180
Query: 697 IADRLNVEFALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAG 876
IAD+LNV+FALIHKERKKANEVD +VLVGDV DRVAILVDDMADTC TIC AADKLLSAG
Sbjct: 181 IADQLNVDFALIHKERKKANEVDCIVLVGDVNDRVAILVDDMADTCVTICLAADKLLSAG 240
Query: 877 ATKVYAILTHGIFSGPAISRINNAAFEAVVVTNTIPQEDKMKHCSKIQVIDISMILAEAI 1056
AT+VYAILTHGIFSGPAISRIN A FEAVVVTNTIPQ++KMKHCSKI+VIDISMILAEAI
Sbjct: 241 ATRVYAILTHGIFSGPAISRINTACFEAVVVTNTIPQDEKMKHCSKIRVIDISMILAEAI 300
Query: 1057 RRTHNGESVSYLFSHVPL 1110
RRTHNGESVSYLFSHVPL
Sbjct: 301 RRTHNGESVSYLFSHVPL 318
>ref|NP_002758.1| phosphoribosyl pyrophosphate synthase-associated protein 2 isoform 1
[Homo sapiens].
Length = 369
Score = 282 bits (722), Expect = 6e-76
Identities = 158/353 (44%), Positives = 221/353 (62%), Gaps = 34/353 (9%)
Frame = +1
Query: 154 TMPNIVLFSGSSHQ---DLSQRVADRLGLELGKVVTKKFSNQETSVEIGESVRGEDVYII 324
T +VLFS +S+ +LS+++A+RLG+E+GKV + N+ET V+I ESVRG+DV+II
Sbjct: 16 TKGGLVLFSANSNSSCMELSKKIAERLGVEMGKVQVYQEPNRETRVQIQESVRGKDVFII 75
Query: 325 QSGCGEINDNLMELLIMINACKIASSSRVTAVIPCFPYARQDKKDKSRAPISAKLVANML 504
Q+ ++N +MELLIM+ ACK + + + VIP FPY++Q K K R I +KL+A+M+
Sbjct: 76 QTVSKDVNTTIMELLIMVYACKTSCAKSIIGVIPYFPYSKQCKMRK-RGSIVSKLLASMM 134
Query: 505 SVAGADHIITMDLHASQIQGFFDIPVDNLYAEPAVLQWIRENIAEWRNCIIVSPDAGGAK 684
AG H+ITMDLH +IQGFF+IPVDNL A P +LQ+I+E I ++RN +IV+ AK
Sbjct: 135 CKAGLTHLITMDLHQKEIQGFFNIPVDNLRASPFLLQYIQEEIPDYRNAVIVAKSPASAK 194
Query: 685 RVTSIADRLNVEFALIHKERKKA-------------------------------NEVDRM 771
R S A+RL + A+IH E + A E +
Sbjct: 195 RAQSFAERLRLGIAVIHGEAQDAESDLVDGRHSPPMVRSVAAIHPSLEIPMLIPKEKPPI 254
Query: 772 VLVGDVKDRVAILVDDMADTCGTICHAADKLLSAGATKVYAILTHGIFSGPAISRINNAA 951
+VGDV R+AI+VDD+ D + AA+ L GA K++ + THG+ S A RI +A
Sbjct: 255 TVVGDVGGRIAIIVDDIIDDVDSFLAAAETLKERGAYKIFVMATHGLLSSDAPRRIEESA 314
Query: 952 FEAVVVTNTIPQEDKMKHCSKIQVIDISMILAEAIRRTHNGESVSYLFSHVPL 1110
+ VVVTNTIP E + C KI+ +DISMIL+EAIRR HNGES+SYLF ++ L
Sbjct: 315 IDEVVVTNTIPHEVQKLQCPKIKTVDISMILSEAIRRIHNGESMSYLFRNIGL 367
>ref|NP_002757.2| phosphoribosyl pyrophosphate synthase-associated protein 1 [Homo
sapiens].
Length = 385
Score = 268 bits (685), Expect = 1e-71
Identities = 157/360 (43%), Positives = 213/360 (59%), Gaps = 33/360 (9%)
Frame = +1
Query: 124 RPAPLVAPRATMPNIVLFSGSSHQ---DLSQRVADRLGLELGKVVTKKFSNQETSVEIGE 294
RP P A A +FS +S +L++R+ +RLG ELGK V + +N ET VEI E
Sbjct: 23 RPVPPPAMNAARTGYRVFSANSTAACTELAKRITERLGAELGKSVVYQETNGETRVEIKE 82
Query: 295 SVRGEDVYIIQSGCGEINDNLMELLIMINACKIASSSRVTAVIPCFPYARQDKKDKSRAP 474
SVRG+D++IIQ+ ++N +MELLIM A K A + + VIP FPY++Q K K R
Sbjct: 83 SVRGQDIFIIQTIPRDVNTAVMELLIMAYALKTACARNIIGVIPYFPYSKQSKMRK-RGS 141
Query: 475 ISAKLVANMLSVAGADHIITMDLHASQIQGFFDIPVDNLYAEPAVLQWIRENIAEWRNCI 654
I KL+A+ML+ AG HIITMDLH +IQGFF PVDNL A P +LQ+I+E I +RN +
Sbjct: 142 IVCKLLASMLAKAGLTHIITMDLHQKEIQGFFSFPVDNLRASPFLLQYIQEEIPNYRNAV 201
Query: 655 IVSPDAGGAKRVTSIADRLNVEFALIHKERK----------------------------- 747
IV+ AKR S A+RL + A+IH E +
Sbjct: 202 IVAKSPDAAKRAQSYAERLRLGLAVIHGEAQCTELDMDDGRHSPPMVKNATVHPGLELPL 261
Query: 748 -KANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAGATKVYAILTHGIFSGP 924
A E + +VGDV R+AI+VDD+ D + AA+ L GA K+Y + THGI S
Sbjct: 262 MMAKEKPPITVVGDVGGRIAIIVDDIIDDVESFVAAAEILKERGAYKIYVMATHGILSAE 321
Query: 925 AISRINNAAFEAVVVTNTIPQEDKMKHCSKIQVIDISMILAEAIRRTHNGESVSYLFSHV 1104
A I ++ + VVVTNT+P E + C KI+ +DIS+IL+EAIRR HNGES++YLF ++
Sbjct: 322 APRLIEESSVDEVVVTNTVPHEVQKLQCPKIKTVDISLILSEAIRRIHNGESMAYLFRNI 381
>ref|NP_001230869.1| phosphoribosyl pyrophosphate synthase-associated protein 2 isoform 3
[Homo sapiens].
Length = 320
Score = 234 bits (596), Expect = 3e-61
Identities = 142/327 (43%), Positives = 200/327 (61%), Gaps = 8/327 (2%)
Frame = +1
Query: 154 TMPNIVLFSGSSHQ---DLSQRVADRLGLELGKVVTKKFSNQETSVEIGESVRGEDVYII 324
T +VLFS +S+ +LS+++A+RLG+E+GKV + N+ET V+I ESVRG+DV+II
Sbjct: 16 TKGGLVLFSANSNSSCMELSKKIAERLGVEMGKVQVYQEPNRETRVQIQESVRGKDVFII 75
Query: 325 QSGCGEINDNLMELLIMINACKIASSSRVTAVIPCFPYARQDKKDKSRAPISAKLVANML 504
Q+ ++N +MELLIM+ ACK + + + VIP FPY++Q K K R I +KL+A+M+
Sbjct: 76 QTVSKDVNTTIMELLIMVYACKTSCAKSIIGVIPYFPYSKQCKMRK-RGSIVSKLLASMM 134
Query: 505 SVAGADHIITMDLHASQIQGFFDIPVDNLYAEPAVLQWIRENIAEWRNCIIVSPDAGGAK 684
AG H+ITMDLH +IQGFF+IPVDNL A P +LQ+I+E I ++RN +IV+ AK
Sbjct: 135 CKAGLTHLITMDLHQKEIQGFFNIPVDNLRASPFLLQYIQEEIPDYRNAVIVAKSPASAK 194
Query: 685 RVTSIADRLNVEFALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKL 864
R S A+RL + A+IH G+ +D + LVD H+ +
Sbjct: 195 RAQSFAERLRLGIAVIH---------------GEAQDAESDLVDGR--------HSPPMV 231
Query: 865 LSAGATKVYAILTHGI-FSGPAISRINNA----AFEAVVVTNTIPQEDKMKHCSKIQVID 1029
S A + I P I+ + + A VVVTNTIP E + C KI+ +D
Sbjct: 232 RSVAAIHPSLEIPMLIPKEKPPITVVGDVGGRIAIIVVVVTNTIPHEVQKLQCPKIKTVD 291
Query: 1030 ISMILAEAIRRTHNGESVSYLFSHVPL 1110
ISMIL+EAIRR HNGES+SYLF ++ L
Sbjct: 292 ISMILSEAIRRIHNGESMSYLFRNIGL 318
>ref|NP_001230865.1| phosphoribosyl pyrophosphate synthase-associated protein 2 isoform 2
[Homo sapiens].
Length = 329
Score = 229 bits (585), Expect = 5e-60
Identities = 127/288 (44%), Positives = 174/288 (60%), Gaps = 31/288 (10%)
Frame = +1
Query: 340 EINDNLMELLIMINACKIASSSRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAGA 519
++N +MELLIM+ ACK + + + VIP FPY++Q K K R I +KL+A+M+ AG
Sbjct: 41 DVNTTIMELLIMVYACKTSCAKSIIGVIPYFPYSKQCKMRK-RGSIVSKLLASMMCKAGL 99
Query: 520 DHIITMDLHASQIQGFFDIPVDNLYAEPAVLQWIRENIAEWRNCIIVSPDAGGAKRVTSI 699
H+ITMDLH +IQGFF+IPVDNL A P +LQ+I+E I ++RN +IV+ AKR S
Sbjct: 100 THLITMDLHQKEIQGFFNIPVDNLRASPFLLQYIQEEIPDYRNAVIVAKSPASAKRAQSF 159
Query: 700 ADRLNVEFALIHKERKKA-------------------------------NEVDRMVLVGD 786
A+RL + A+IH E + A E + +VGD
Sbjct: 160 AERLRLGIAVIHGEAQDAESDLVDGRHSPPMVRSVAAIHPSLEIPMLIPKEKPPITVVGD 219
Query: 787 VKDRVAILVDDMADTCGTICHAADKLLSAGATKVYAILTHGIFSGPAISRINNAAFEAVV 966
V R+AI+VDD+ D + AA+ L GA K++ + THG+ S A RI +A + VV
Sbjct: 220 VGGRIAIIVDDIIDDVDSFLAAAETLKERGAYKIFVMATHGLLSSDAPRRIEESAIDEVV 279
Query: 967 VTNTIPQEDKMKHCSKIQVIDISMILAEAIRRTHNGESVSYLFSHVPL 1110
VTNTIP E + C KI+ +DISMIL+EAIRR HNGES+SYLF ++ L
Sbjct: 280 VTNTIPHEVQKLQCPKIKTVDISMILSEAIRRIHNGESMSYLFRNIGL 327
>ref|NP_001230870.1| phosphoribosyl pyrophosphate synthase-associated protein 2 isoform 4
[Homo sapiens].
Length = 283
Score = 225 bits (573), Expect = 1e-58
Identities = 126/282 (44%), Positives = 170/282 (60%), Gaps = 31/282 (10%)
Frame = +1
Query: 358 MELLIMINACKIASSSRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAGADHIITM 537
MELLIM+ ACK + + + VIP FPY++Q K K R I +KL+A+M+ AG H+ITM
Sbjct: 1 MELLIMVYACKTSCAKSIIGVIPYFPYSKQCKMRK-RGSIVSKLLASMMCKAGLTHLITM 59
Query: 538 DLHASQIQGFFDIPVDNLYAEPAVLQWIRENIAEWRNCIIVSPDAGGAKRVTSIADRLNV 717
DLH +IQGFF+IPVDNL A P +LQ+I+E I ++RN +IV+ AKR S A+RL +
Sbjct: 60 DLHQKEIQGFFNIPVDNLRASPFLLQYIQEEIPDYRNAVIVAKSPASAKRAQSFAERLRL 119
Query: 718 EFALIHKERKKA-------------------------------NEVDRMVLVGDVKDRVA 804
A+IH E + A E + +VGDV R+A
Sbjct: 120 GIAVIHGEAQDAESDLVDGRHSPPMVRSVAAIHPSLEIPMLIPKEKPPITVVGDVGGRIA 179
Query: 805 ILVDDMADTCGTICHAADKLLSAGATKVYAILTHGIFSGPAISRINNAAFEAVVVTNTIP 984
I+VDD+ D + AA+ L GA K++ + THG+ S A RI +A + VVVTNTIP
Sbjct: 180 IIVDDIIDDVDSFLAAAETLKERGAYKIFVMATHGLLSSDAPRRIEESAIDEVVVTNTIP 239
Query: 985 QEDKMKHCSKIQVIDISMILAEAIRRTHNGESVSYLFSHVPL 1110
E + C KI+ +DISMIL+EAIRR HNGES+SYLF ++ L
Sbjct: 240 HEVQKLQCPKIKTVDISMILSEAIRRIHNGESMSYLFRNIGL 281
>ref|NP_001230871.1| phosphoribosyl pyrophosphate synthase-associated protein 2 isoform 5
[Homo sapiens].
Length = 283
Score = 225 bits (573), Expect = 1e-58
Identities = 126/282 (44%), Positives = 170/282 (60%), Gaps = 31/282 (10%)
Frame = +1
Query: 358 MELLIMINACKIASSSRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAGADHIITM 537
MELLIM+ ACK + + + VIP FPY++Q K K R I +KL+A+M+ AG H+ITM
Sbjct: 1 MELLIMVYACKTSCAKSIIGVIPYFPYSKQCKMRK-RGSIVSKLLASMMCKAGLTHLITM 59
Query: 538 DLHASQIQGFFDIPVDNLYAEPAVLQWIRENIAEWRNCIIVSPDAGGAKRVTSIADRLNV 717
DLH +IQGFF+IPVDNL A P +LQ+I+E I ++RN +IV+ AKR S A+RL +
Sbjct: 60 DLHQKEIQGFFNIPVDNLRASPFLLQYIQEEIPDYRNAVIVAKSPASAKRAQSFAERLRL 119
Query: 718 EFALIHKERKKA-------------------------------NEVDRMVLVGDVKDRVA 804
A+IH E + A E + +VGDV R+A
Sbjct: 120 GIAVIHGEAQDAESDLVDGRHSPPMVRSVAAIHPSLEIPMLIPKEKPPITVVGDVGGRIA 179
Query: 805 ILVDDMADTCGTICHAADKLLSAGATKVYAILTHGIFSGPAISRINNAAFEAVVVTNTIP 984
I+VDD+ D + AA+ L GA K++ + THG+ S A RI +A + VVVTNTIP
Sbjct: 180 IIVDDIIDDVDSFLAAAETLKERGAYKIFVMATHGLLSSDAPRRIEESAIDEVVVTNTIP 239
Query: 985 QEDKMKHCSKIQVIDISMILAEAIRRTHNGESVSYLFSHVPL 1110
E + C KI+ +DISMIL+EAIRR HNGES+SYLF ++ L
Sbjct: 240 HEVQKLQCPKIKTVDISMILSEAIRRIHNGESMSYLFRNIGL 281
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 69,516,588
Number of extensions: 1802400
Number of successful extensions: 5218
Number of sequences better than 1.0e-05: 11
Number of HSP's gapped: 5205
Number of HSP's successfully gapped: 14
Length of query: 619
Length of database: 18,297,164
Length adjustment: 109
Effective length of query: 510
Effective length of database: 14,704,088
Effective search space: 7499084880
Effective search space used: 7499084880
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002551
(1859 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_080938.1| ribose-phosphate pyrophosphokinase 2 [Mus muscu... 620 e-177
Alignment gi|NP_067438.1| ribose-phosphate pyrophosphokinase 1 [Mus muscu... 607 e-173
Alignment gi|NP_001032835.2| hypothetical protein LOC328099 [Mus musculus]. 604 e-173
Alignment gi|NP_083570.1| phosphoribosyl pyrophosphate synthetase 1-like ... 584 e-167
Alignment gi|NP_001157714.1| phosphoribosyl pyrophosphate synthase-associ... 279 5e-75
Alignment gi|NP_659055.1| phosphoribosyl pyrophosphate synthase-associate... 279 5e-75
Alignment gi|NP_080640.1| phosphoribosyl pyrophosphate synthase-associate... 266 4e-71
Alignment gi|NP_001157716.1| phosphoribosyl pyrophosphate synthase-associ... 222 7e-58
Alignment gi|NP_001157715.1| phosphoribosyl pyrophosphate synthase-associ... 222 7e-58
>ref|NP_080938.1| ribose-phosphate pyrophosphokinase 2 [Mus musculus].
Length = 318
Score = 620 bits (1599), Expect = e-177
Identities = 316/318 (99%), Positives = 317/318 (99%)
Frame = +1
Query: 157 MPNIVLFSGSSHQDLSQRVADRLGLELGKVVTKKFSNQETSVEIGESVRGEDVYIIQSGC 336
MPNIVLFSGSSHQDLSQRVADRLGLELGKVVTKKFSNQETSVEIGESVRGEDVYIIQSGC
Sbjct: 1 MPNIVLFSGSSHQDLSQRVADRLGLELGKVVTKKFSNQETSVEIGESVRGEDVYIIQSGC 60
Query: 337 GEINDNLMELLIMINACKIASSSRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAG 516
GEINDNLMELLIMINACKIASSSRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAG
Sbjct: 61 GEINDNLMELLIMINACKIASSSRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAG 120
Query: 517 ADHIITMDLHASQIQGFFDIPVDNLYAEPAVLQWIRENIAEWRNCIIVSPDAGGAKRVTS 696
ADHIITMDLHASQIQGFFDIPVDNLYAEPAVLQWIRENI EWRNCIIVSPDAGGAKRVTS
Sbjct: 121 ADHIITMDLHASQIQGFFDIPVDNLYAEPAVLQWIRENITEWRNCIIVSPDAGGAKRVTS 180
Query: 697 IADRLNVEFALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAG 876
IADRLNVEFALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAG
Sbjct: 181 IADRLNVEFALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAG 240
Query: 877 ATKVYAILTHGIFSGPAISRINNAAFEAVVVTNTIPQEDKMKHCSKIQVIDISMILAEAI 1056
ATKVYAILTHGIFSGPAISRIN+AAFEAVVVTNTIPQEDKMKHCSKIQVIDISMILAEAI
Sbjct: 241 ATKVYAILTHGIFSGPAISRINSAAFEAVVVTNTIPQEDKMKHCSKIQVIDISMILAEAI 300
Query: 1057 RRTHNGESVSYLFSHVPL 1110
RRTHNGESVSYLFSHVPL
Sbjct: 301 RRTHNGESVSYLFSHVPL 318
>ref|NP_067438.1| ribose-phosphate pyrophosphokinase 1 [Mus musculus].
Length = 318
Score = 607 bits (1565), Expect = e-173
Identities = 305/318 (95%), Positives = 314/318 (98%)
Frame = +1
Query: 157 MPNIVLFSGSSHQDLSQRVADRLGLELGKVVTKKFSNQETSVEIGESVRGEDVYIIQSGC 336
MPNI +FSGSSHQDLSQ++ADRLGLELGKVVTKKFSNQET VEIGESVRGEDVYI+QSGC
Sbjct: 1 MPNIKIFSGSSHQDLSQKIADRLGLELGKVVTKKFSNQETCVEIGESVRGEDVYIVQSGC 60
Query: 337 GEINDNLMELLIMINACKIASSSRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAG 516
GEINDNLMELLIMINACKIAS+SRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAG
Sbjct: 61 GEINDNLMELLIMINACKIASASRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAG 120
Query: 517 ADHIITMDLHASQIQGFFDIPVDNLYAEPAVLQWIRENIAEWRNCIIVSPDAGGAKRVTS 696
ADHIITMDLHASQIQGFFDIPVDNLYAEPAVL+WIRENI+EWRNC IVSPDAGGAKRVTS
Sbjct: 121 ADHIITMDLHASQIQGFFDIPVDNLYAEPAVLKWIRENISEWRNCTIVSPDAGGAKRVTS 180
Query: 697 IADRLNVEFALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAG 876
IADRLNV+FALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAG
Sbjct: 181 IADRLNVDFALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAG 240
Query: 877 ATKVYAILTHGIFSGPAISRINNAAFEAVVVTNTIPQEDKMKHCSKIQVIDISMILAEAI 1056
AT+VYAILTHGIFSGPAISRINNA FEAVVVTNTIPQEDKMKHCSKIQVIDISMILAEAI
Sbjct: 241 ATRVYAILTHGIFSGPAISRINNACFEAVVVTNTIPQEDKMKHCSKIQVIDISMILAEAI 300
Query: 1057 RRTHNGESVSYLFSHVPL 1110
RRTHNGESVSYLFSHVPL
Sbjct: 301 RRTHNGESVSYLFSHVPL 318
>ref|NP_001032835.2| hypothetical protein LOC328099 [Mus musculus].
Length = 318
Score = 604 bits (1557), Expect = e-173
Identities = 304/318 (95%), Positives = 313/318 (98%)
Frame = +1
Query: 157 MPNIVLFSGSSHQDLSQRVADRLGLELGKVVTKKFSNQETSVEIGESVRGEDVYIIQSGC 336
M NI +FSGSSHQDLSQ++ADRLGLELGKVVTKKFSNQET VEIGESVRGEDVYI+QSGC
Sbjct: 1 MSNIKIFSGSSHQDLSQKIADRLGLELGKVVTKKFSNQETCVEIGESVRGEDVYIVQSGC 60
Query: 337 GEINDNLMELLIMINACKIASSSRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAG 516
GEINDNLMELLIMINACKIAS+SRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAG
Sbjct: 61 GEINDNLMELLIMINACKIASASRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAG 120
Query: 517 ADHIITMDLHASQIQGFFDIPVDNLYAEPAVLQWIRENIAEWRNCIIVSPDAGGAKRVTS 696
ADHIITMDLHASQIQGFFDIPVDNLYAEPAVL+WIRENI+EWRNC IVSPDAGGAKRVTS
Sbjct: 121 ADHIITMDLHASQIQGFFDIPVDNLYAEPAVLKWIRENISEWRNCTIVSPDAGGAKRVTS 180
Query: 697 IADRLNVEFALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAG 876
IADRLNV+FALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAG
Sbjct: 181 IADRLNVDFALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAG 240
Query: 877 ATKVYAILTHGIFSGPAISRINNAAFEAVVVTNTIPQEDKMKHCSKIQVIDISMILAEAI 1056
AT+VYAILTHGIFSGPAISRINNA FEAVVVTNTIPQEDKMKHCSKIQVIDISMILAEAI
Sbjct: 241 ATRVYAILTHGIFSGPAISRINNACFEAVVVTNTIPQEDKMKHCSKIQVIDISMILAEAI 300
Query: 1057 RRTHNGESVSYLFSHVPL 1110
RRTHNGESVSYLFSHVPL
Sbjct: 301 RRTHNGESVSYLFSHVPL 318
>ref|NP_083570.1| phosphoribosyl pyrophosphate synthetase 1-like 1 [Mus musculus].
Length = 318
Score = 584 bits (1505), Expect = e-167
Identities = 292/318 (91%), Positives = 308/318 (96%)
Frame = +1
Query: 157 MPNIVLFSGSSHQDLSQRVADRLGLELGKVVTKKFSNQETSVEIGESVRGEDVYIIQSGC 336
MPNI LFSGSSHQDLSQ++ +RLGLEL KVVTKKFSNQET VEIGESVRGEDVYI+QSGC
Sbjct: 1 MPNIKLFSGSSHQDLSQKITERLGLELSKVVTKKFSNQETCVEIGESVRGEDVYIVQSGC 60
Query: 337 GEINDNLMELLIMINACKIASSSRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAG 516
GEIND+LMELLIMINACKIAS+SRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLS+AG
Sbjct: 61 GEINDSLMELLIMINACKIASASRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSIAG 120
Query: 517 ADHIITMDLHASQIQGFFDIPVDNLYAEPAVLQWIRENIAEWRNCIIVSPDAGGAKRVTS 696
ADHIITMDLHASQIQGFFDIPVDNLYAEPAVL+WI+ENI++WRNC IVSPDAGGAKRVTS
Sbjct: 121 ADHIITMDLHASQIQGFFDIPVDNLYAEPAVLKWIKENISDWRNCTIVSPDAGGAKRVTS 180
Query: 697 IADRLNVEFALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAG 876
IAD LNV+FALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTIC+AADKLLS G
Sbjct: 181 IADHLNVDFALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICYAADKLLSEG 240
Query: 877 ATKVYAILTHGIFSGPAISRINNAAFEAVVVTNTIPQEDKMKHCSKIQVIDISMILAEAI 1056
AT+VYAILTHGIFSGPAI+RIN A FEAVVVTNTIPQEDKMK CSKIQVIDI+MILAEAI
Sbjct: 241 ATRVYAILTHGIFSGPAIARINGACFEAVVVTNTIPQEDKMKQCSKIQVIDIAMILAEAI 300
Query: 1057 RRTHNGESVSYLFSHVPL 1110
RRTHNGESVSYLFSHVPL
Sbjct: 301 RRTHNGESVSYLFSHVPL 318
>ref|NP_001157714.1| phosphoribosyl pyrophosphate synthase-associated protein 2 isoform a
[Mus musculus].
Length = 369
Score = 279 bits (714), Expect = 5e-75
Identities = 157/353 (44%), Positives = 220/353 (62%), Gaps = 34/353 (9%)
Frame = +1
Query: 154 TMPNIVLFSGSSHQ---DLSQRVADRLGLELGKVVTKKFSNQETSVEIGESVRGEDVYII 324
T +VLFS +S+ +LS+++A+RLG+E+GKV + N+ET V+I ESVRG+DV+II
Sbjct: 16 TKGGLVLFSANSNSSCMELSKKIAERLGVEMGKVQVYQEPNRETRVQIQESVRGKDVFII 75
Query: 325 QSGCGEINDNLMELLIMINACKIASSSRVTAVIPCFPYARQDKKDKSRAPISAKLVANML 504
Q+ ++N +MELLIM+ ACK + + + VIP FPY++Q K K R I +KL+A+M+
Sbjct: 76 QTISKDVNTTIMELLIMVYACKTSCAKSIIGVIPYFPYSKQCKMRK-RGSIVSKLLASMM 134
Query: 505 SVAGADHIITMDLHASQIQGFFDIPVDNLYAEPAVLQWIRENIAEWRNCIIVSPDAGGAK 684
AG H+ITMDLH +IQGFF+IPVDNL A P +LQ+I+E I ++RN +IV+ AK
Sbjct: 135 CKAGLTHLITMDLHQKEIQGFFNIPVDNLRASPFLLQYIQEEIPDYRNAVIVAKSPASAK 194
Query: 685 RVTSIADRLNVEFALIHKERKKA-------------------------------NEVDRM 771
R S A+RL + A+IH E + A E +
Sbjct: 195 RAQSFAERLRLGIAVIHGEAQDAESDLVDGRHSPPMVRSVAAIHPSLEIPMLIPKEKPPI 254
Query: 772 VLVGDVKDRVAILVDDMADTCGTICHAADKLLSAGATKVYAILTHGIFSGPAISRINNAA 951
+VGDV R+AI+VDD+ D + AA+ L GA K++ + THG+ S A I +A
Sbjct: 255 TVVGDVGGRIAIIVDDIIDDVDSFLAAAETLKERGAYKIFVMATHGLLSSDAPRLIEESA 314
Query: 952 FEAVVVTNTIPQEDKMKHCSKIQVIDISMILAEAIRRTHNGESVSYLFSHVPL 1110
+ VVVTNTIP E + C KI+ +DISMIL+EAIRR HNGES+SYLF ++ L
Sbjct: 315 IDEVVVTNTIPHEIQKLQCPKIKTVDISMILSEAIRRIHNGESMSYLFRNIGL 367
>ref|NP_659055.1| phosphoribosyl pyrophosphate synthase-associated protein 2 isoform a
[Mus musculus].
Length = 369
Score = 279 bits (714), Expect = 5e-75
Identities = 157/353 (44%), Positives = 220/353 (62%), Gaps = 34/353 (9%)
Frame = +1
Query: 154 TMPNIVLFSGSSHQ---DLSQRVADRLGLELGKVVTKKFSNQETSVEIGESVRGEDVYII 324
T +VLFS +S+ +LS+++A+RLG+E+GKV + N+ET V+I ESVRG+DV+II
Sbjct: 16 TKGGLVLFSANSNSSCMELSKKIAERLGVEMGKVQVYQEPNRETRVQIQESVRGKDVFII 75
Query: 325 QSGCGEINDNLMELLIMINACKIASSSRVTAVIPCFPYARQDKKDKSRAPISAKLVANML 504
Q+ ++N +MELLIM+ ACK + + + VIP FPY++Q K K R I +KL+A+M+
Sbjct: 76 QTISKDVNTTIMELLIMVYACKTSCAKSIIGVIPYFPYSKQCKMRK-RGSIVSKLLASMM 134
Query: 505 SVAGADHIITMDLHASQIQGFFDIPVDNLYAEPAVLQWIRENIAEWRNCIIVSPDAGGAK 684
AG H+ITMDLH +IQGFF+IPVDNL A P +LQ+I+E I ++RN +IV+ AK
Sbjct: 135 CKAGLTHLITMDLHQKEIQGFFNIPVDNLRASPFLLQYIQEEIPDYRNAVIVAKSPASAK 194
Query: 685 RVTSIADRLNVEFALIHKERKKA-------------------------------NEVDRM 771
R S A+RL + A+IH E + A E +
Sbjct: 195 RAQSFAERLRLGIAVIHGEAQDAESDLVDGRHSPPMVRSVAAIHPSLEIPMLIPKEKPPI 254
Query: 772 VLVGDVKDRVAILVDDMADTCGTICHAADKLLSAGATKVYAILTHGIFSGPAISRINNAA 951
+VGDV R+AI+VDD+ D + AA+ L GA K++ + THG+ S A I +A
Sbjct: 255 TVVGDVGGRIAIIVDDIIDDVDSFLAAAETLKERGAYKIFVMATHGLLSSDAPRLIEESA 314
Query: 952 FEAVVVTNTIPQEDKMKHCSKIQVIDISMILAEAIRRTHNGESVSYLFSHVPL 1110
+ VVVTNTIP E + C KI+ +DISMIL+EAIRR HNGES+SYLF ++ L
Sbjct: 315 IDEVVVTNTIPHEIQKLQCPKIKTVDISMILSEAIRRIHNGESMSYLFRNIGL 367
>ref|NP_080640.1| phosphoribosyl pyrophosphate synthase-associated protein 1 [Mus
musculus].
Length = 385
Score = 266 bits (680), Expect = 4e-71
Identities = 157/360 (43%), Positives = 212/360 (58%), Gaps = 33/360 (9%)
Frame = +1
Query: 124 RPAPLVAPRATMPNIVLFSGSSHQ---DLSQRVADRLGLELGKVVTKKFSNQETSVEIGE 294
RPA A A +FS +S +L++R+ +RLG ELGK V + +N ET VEI E
Sbjct: 23 RPAASPAMNAARTGYRVFSANSTAACTELAKRITERLGAELGKSVVYQETNGETRVEIKE 82
Query: 295 SVRGEDVYIIQSGCGEINDNLMELLIMINACKIASSSRVTAVIPCFPYARQDKKDKSRAP 474
SVRG+D++IIQ+ ++N +MELLIM A K A + + VIP FPY++Q K K R
Sbjct: 83 SVRGQDIFIIQTIPRDVNTAVMELLIMAYALKTACARNIIGVIPYFPYSKQSKMRK-RGS 141
Query: 475 ISAKLVANMLSVAGADHIITMDLHASQIQGFFDIPVDNLYAEPAVLQWIRENIAEWRNCI 654
I KL+A+ML+ AG HIITMDLH +IQGFF PVDNL A P +LQ+I+E I +RN +
Sbjct: 142 IVCKLLASMLAKAGLTHIITMDLHQKEIQGFFSFPVDNLRASPFLLQYIQEEIPNYRNAV 201
Query: 655 IVSPDAGGAKRVTSIADRLNVEFALIHKERK----------------------------- 747
IV+ AKR S A+RL + A+IH E +
Sbjct: 202 IVAKSPDAAKRAQSYAERLRLGLAVIHGEAQCTELDMDDGRHSPPMVKNATVHPGLELPL 261
Query: 748 -KANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAGATKVYAILTHGIFSGP 924
A E + +VGDV R+AI+VDD+ D + AA+ L GA K+Y + THGI S
Sbjct: 262 MMAKEKPPITVVGDVGGRIAIIVDDIIDDVESFVAAAEILKERGAYKIYVMATHGILSAE 321
Query: 925 AISRINNAAFEAVVVTNTIPQEDKMKHCSKIQVIDISMILAEAIRRTHNGESVSYLFSHV 1104
A I + + VVVTNT+P E + C KI+ +DIS+IL+EAIRR HNGES++YLF ++
Sbjct: 322 APRLIEESPIDEVVVTNTVPHELQKLQCPKIKTVDISLILSEAIRRIHNGESMAYLFRNI 381
>ref|NP_001157716.1| phosphoribosyl pyrophosphate synthase-associated protein 2 isoform b
[Mus musculus].
Length = 283
Score = 222 bits (566), Expect = 7e-58
Identities = 125/282 (44%), Positives = 169/282 (59%), Gaps = 31/282 (10%)
Frame = +1
Query: 358 MELLIMINACKIASSSRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAGADHIITM 537
MELLIM+ ACK + + + VIP FPY++Q K K R I +KL+A+M+ AG H+ITM
Sbjct: 1 MELLIMVYACKTSCAKSIIGVIPYFPYSKQCKMRK-RGSIVSKLLASMMCKAGLTHLITM 59
Query: 538 DLHASQIQGFFDIPVDNLYAEPAVLQWIRENIAEWRNCIIVSPDAGGAKRVTSIADRLNV 717
DLH +IQGFF+IPVDNL A P +LQ+I+E I ++RN +IV+ AKR S A+RL +
Sbjct: 60 DLHQKEIQGFFNIPVDNLRASPFLLQYIQEEIPDYRNAVIVAKSPASAKRAQSFAERLRL 119
Query: 718 EFALIHKERKKA-------------------------------NEVDRMVLVGDVKDRVA 804
A+IH E + A E + +VGDV R+A
Sbjct: 120 GIAVIHGEAQDAESDLVDGRHSPPMVRSVAAIHPSLEIPMLIPKEKPPITVVGDVGGRIA 179
Query: 805 ILVDDMADTCGTICHAADKLLSAGATKVYAILTHGIFSGPAISRINNAAFEAVVVTNTIP 984
I+VDD+ D + AA+ L GA K++ + THG+ S A I +A + VVVTNTIP
Sbjct: 180 IIVDDIIDDVDSFLAAAETLKERGAYKIFVMATHGLLSSDAPRLIEESAIDEVVVTNTIP 239
Query: 985 QEDKMKHCSKIQVIDISMILAEAIRRTHNGESVSYLFSHVPL 1110
E + C KI+ +DISMIL+EAIRR HNGES+SYLF ++ L
Sbjct: 240 HEIQKLQCPKIKTVDISMILSEAIRRIHNGESMSYLFRNIGL 281
>ref|NP_001157715.1| phosphoribosyl pyrophosphate synthase-associated protein 2 isoform b
[Mus musculus].
Length = 283
Score = 222 bits (566), Expect = 7e-58
Identities = 125/282 (44%), Positives = 169/282 (59%), Gaps = 31/282 (10%)
Frame = +1
Query: 358 MELLIMINACKIASSSRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAGADHIITM 537
MELLIM+ ACK + + + VIP FPY++Q K K R I +KL+A+M+ AG H+ITM
Sbjct: 1 MELLIMVYACKTSCAKSIIGVIPYFPYSKQCKMRK-RGSIVSKLLASMMCKAGLTHLITM 59
Query: 538 DLHASQIQGFFDIPVDNLYAEPAVLQWIRENIAEWRNCIIVSPDAGGAKRVTSIADRLNV 717
DLH +IQGFF+IPVDNL A P +LQ+I+E I ++RN +IV+ AKR S A+RL +
Sbjct: 60 DLHQKEIQGFFNIPVDNLRASPFLLQYIQEEIPDYRNAVIVAKSPASAKRAQSFAERLRL 119
Query: 718 EFALIHKERKKA-------------------------------NEVDRMVLVGDVKDRVA 804
A+IH E + A E + +VGDV R+A
Sbjct: 120 GIAVIHGEAQDAESDLVDGRHSPPMVRSVAAIHPSLEIPMLIPKEKPPITVVGDVGGRIA 179
Query: 805 ILVDDMADTCGTICHAADKLLSAGATKVYAILTHGIFSGPAISRINNAAFEAVVVTNTIP 984
I+VDD+ D + AA+ L GA K++ + THG+ S A I +A + VVVTNTIP
Sbjct: 180 IIVDDIIDDVDSFLAAAETLKERGAYKIFVMATHGLLSSDAPRLIEESAIDEVVVTNTIP 239
Query: 985 QEDKMKHCSKIQVIDISMILAEAIRRTHNGESVSYLFSHVPL 1110
E + C KI+ +DISMIL+EAIRR HNGES+SYLF ++ L
Sbjct: 240 HEIQKLQCPKIKTVDISMILSEAIRRIHNGESMSYLFRNIGL 281
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 59,151,708
Number of extensions: 1520752
Number of successful extensions: 4312
Number of sequences better than 1.0e-05: 9
Number of HSP's gapped: 4306
Number of HSP's successfully gapped: 10
Length of query: 619
Length of database: 15,617,559
Length adjustment: 107
Effective length of query: 512
Effective length of database: 12,403,707
Effective search space: 6350697984
Effective search space used: 6350697984
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002551
(1859 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001230730.1| phosphoribosyl pyrophosphate synthetase 2 [S... 622 e-178
Alignment gi|XP_003135349.1| PREDICTED: ribose-phosphate pyrophosphokinas... 607 e-174
Alignment gi|XP_003130238.1| PREDICTED: ribose-phosphate pyrophosphokinas... 577 e-165
Alignment gi|XP_003131222.1| PREDICTED: phosphoribosyl pyrophosphate synt... 270 2e-72
Alignment gi|XP_003358354.1| PREDICTED: phosphoribosyl pyrophosphate synt... 107 2e-23
Alignment gi|XP_003132086.2| PREDICTED: phosphoribosyl pyrophosphate synt... 107 2e-23
Alignment gi|XP_003361489.1| PREDICTED: phosphoribosyl pyrophosphate synt... 107 2e-23
Alignment gi|XP_003132090.2| PREDICTED: hypothetical protein LOC100511960... 49 7e-06
>ref|NP_001230730.1| phosphoribosyl pyrophosphate synthetase 2 [Sus scrofa].
Length = 318
Score = 622 bits (1605), Expect = e-178
Identities = 317/318 (99%), Positives = 318/318 (100%)
Frame = +1
Query: 157 MPNIVLFSGSSHQDLSQRVADRLGLELGKVVTKKFSNQETSVEIGESVRGEDVYIIQSGC 336
MPNIVLFSGSSHQDLSQRVADRLGLELGKVVTKKFSNQETSVEIGESVRGEDVYIIQSGC
Sbjct: 1 MPNIVLFSGSSHQDLSQRVADRLGLELGKVVTKKFSNQETSVEIGESVRGEDVYIIQSGC 60
Query: 337 GEINDNLMELLIMINACKIASSSRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAG 516
GEINDNLMELLIMINACKIASSSRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAG
Sbjct: 61 GEINDNLMELLIMINACKIASSSRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAG 120
Query: 517 ADHIITMDLHASQIQGFFDIPVDNLYAEPAVLQWIRENIAEWRNCIIVSPDAGGAKRVTS 696
ADHIITMDLHASQIQGFFDIP+DNLYAEPAVLQWIRENIAEWRNCIIVSPDAGGAKRVTS
Sbjct: 121 ADHIITMDLHASQIQGFFDIPMDNLYAEPAVLQWIRENIAEWRNCIIVSPDAGGAKRVTS 180
Query: 697 IADRLNVEFALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAG 876
IADRLNVEFALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAG
Sbjct: 181 IADRLNVEFALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAG 240
Query: 877 ATKVYAILTHGIFSGPAISRINNAAFEAVVVTNTIPQEDKMKHCSKIQVIDISMILAEAI 1056
ATKVYAILTHGIFSGPAISRINNAAFEAVVVTNTIPQEDKMKHCSKIQVIDISMILAEAI
Sbjct: 241 ATKVYAILTHGIFSGPAISRINNAAFEAVVVTNTIPQEDKMKHCSKIQVIDISMILAEAI 300
Query: 1057 RRTHNGESVSYLFSHVPL 1110
RRTHNGESVSYLFSHVPL
Sbjct: 301 RRTHNGESVSYLFSHVPL 318
>ref|XP_003135349.1| PREDICTED: ribose-phosphate pyrophosphokinase 1-like [Sus scrofa].
Length = 318
Score = 607 bits (1565), Expect = e-174
Identities = 305/318 (95%), Positives = 314/318 (98%)
Frame = +1
Query: 157 MPNIVLFSGSSHQDLSQRVADRLGLELGKVVTKKFSNQETSVEIGESVRGEDVYIIQSGC 336
MPNI +FSGSSHQDLSQ++ADRLGLELGKVVTKKFSNQET VEIGESVRGEDVYI+QSGC
Sbjct: 1 MPNIKIFSGSSHQDLSQKIADRLGLELGKVVTKKFSNQETCVEIGESVRGEDVYIVQSGC 60
Query: 337 GEINDNLMELLIMINACKIASSSRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAG 516
GEINDNLMELLIMINACKIAS+SRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAG
Sbjct: 61 GEINDNLMELLIMINACKIASASRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAG 120
Query: 517 ADHIITMDLHASQIQGFFDIPVDNLYAEPAVLQWIRENIAEWRNCIIVSPDAGGAKRVTS 696
ADHIITMDLHASQIQGFFDIPVDNLYAEPAVL+WIRENI+EWRNC IVSPDAGGAKRVTS
Sbjct: 121 ADHIITMDLHASQIQGFFDIPVDNLYAEPAVLKWIRENISEWRNCTIVSPDAGGAKRVTS 180
Query: 697 IADRLNVEFALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAG 876
IADRLNV+FALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAG
Sbjct: 181 IADRLNVDFALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAG 240
Query: 877 ATKVYAILTHGIFSGPAISRINNAAFEAVVVTNTIPQEDKMKHCSKIQVIDISMILAEAI 1056
AT+VYAILTHGIFSGPAISRINNA FEAVVVTNTIPQEDKMKHCSKIQVIDISMILAEAI
Sbjct: 241 ATRVYAILTHGIFSGPAISRINNACFEAVVVTNTIPQEDKMKHCSKIQVIDISMILAEAI 300
Query: 1057 RRTHNGESVSYLFSHVPL 1110
RRTHNGESVSYLFSHVPL
Sbjct: 301 RRTHNGESVSYLFSHVPL 318
>ref|XP_003130238.1| PREDICTED: ribose-phosphate pyrophosphokinase 1-like [Sus scrofa].
Length = 318
Score = 577 bits (1487), Expect = e-165
Identities = 289/318 (90%), Positives = 308/318 (96%)
Frame = +1
Query: 157 MPNIVLFSGSSHQDLSQRVADRLGLELGKVVTKKFSNQETSVEIGESVRGEDVYIIQSGC 336
MPNI +FSGSSHQDLSQ++A RLGL+LGKVVTKKFSNQET VEIGESVRGEDVYI+QSGC
Sbjct: 1 MPNIKIFSGSSHQDLSQKIAGRLGLKLGKVVTKKFSNQETCVEIGESVRGEDVYIMQSGC 60
Query: 337 GEINDNLMELLIMINACKIASSSRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAG 516
GEINDNLMELLIMINACK AS+SRVTAVIPCFPYARQDKKDK++APISAKLVANMLSVAG
Sbjct: 61 GEINDNLMELLIMINACKTASASRVTAVIPCFPYARQDKKDKNQAPISAKLVANMLSVAG 120
Query: 517 ADHIITMDLHASQIQGFFDIPVDNLYAEPAVLQWIRENIAEWRNCIIVSPDAGGAKRVTS 696
ADHIITMDLHASQIQGFFDIPVDNLYAEPAVL+WI+ENI+EWRNC IVSPDA GAKRVTS
Sbjct: 121 ADHIITMDLHASQIQGFFDIPVDNLYAEPAVLKWIKENISEWRNCTIVSPDADGAKRVTS 180
Query: 697 IADRLNVEFALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAG 876
IADRLNV+FALIHKE+KKANEV+RMVLVGDVKDRVAILVDD+ADTCGTICHAADKLLSAG
Sbjct: 181 IADRLNVDFALIHKEKKKANEVNRMVLVGDVKDRVAILVDDIADTCGTICHAADKLLSAG 240
Query: 877 ATKVYAILTHGIFSGPAISRINNAAFEAVVVTNTIPQEDKMKHCSKIQVIDISMILAEAI 1056
A +VYAIL+HGIFSGPAI+ IN+A FEAVVVTNTIPQEDKMK CSKIQVIDISMILAEAI
Sbjct: 241 AIRVYAILSHGIFSGPAITHINSACFEAVVVTNTIPQEDKMKRCSKIQVIDISMILAEAI 300
Query: 1057 RRTHNGESVSYLFSHVPL 1110
RRTHNGESVSYLFSHVPL
Sbjct: 301 RRTHNGESVSYLFSHVPL 318
>ref|XP_003131222.1| PREDICTED: phosphoribosyl pyrophosphate synthase-associated protein 1
[Sus scrofa].
Length = 385
Score = 270 bits (691), Expect = 2e-72
Identities = 162/376 (43%), Positives = 222/376 (59%), Gaps = 30/376 (7%)
Frame = +1
Query: 67 PPLALSRSRRGLPCFCRLCRPAPLVAPRATMPNIVLFSGSSHQDLSQRVADRLGLELGKV 246
PPL++S + R P C RPA + A R S ++ +L++R+ +RLG ELGK
Sbjct: 9 PPLSVSSAFRA-PRACPASRPA-MNAARTGYRVFSANSTAACTELAKRITERLGAELGKS 66
Query: 247 VTKKFSNQETSVEIGESVRGEDVYIIQSGCGEINDNLMELLIMINACKIASSSRVTAVIP 426
V + +N ET VEI ESVRG+D++IIQ+ ++N +MELLIM A K A + + VIP
Sbjct: 67 VVYQETNGETRVEIKESVRGQDIFIIQTIPRDVNTAVMELLIMAYALKTACARNIIGVIP 126
Query: 427 CFPYARQDKKDKSRAPISAKLVANMLSVAGADHIITMDLHASQIQGFFDIPVDNLYAEPA 606
FPY++Q K K R I KL+A+ML+ AG HIITMDLH +IQGFF PVDNL A P
Sbjct: 127 YFPYSKQSKMRK-RGSIVCKLLASMLAKAGLTHIITMDLHQKEIQGFFSFPVDNLRASPF 185
Query: 607 VLQWIRENIAEWRNCIIVSPDAGGAKRVTSIADRLNVEFALIHKERK------------- 747
+LQ+I+E I +RN +IV+ AKR S A+RL + A+IH E +
Sbjct: 186 LLQYIQEEIPNYRNAVIVAKSPDAAKRAQSYAERLRLGLAVIHGEAQCAELDMDDGRHSP 245
Query: 748 -----------------KANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAG 876
A E + +VGDV R+AI+VDD+ D + AA+ L G
Sbjct: 246 PMVKNATVHPGLELPLMMAKEKPPITVVGDVGGRIAIIVDDIIDDVESFVAAAEILKERG 305
Query: 877 ATKVYAILTHGIFSGPAISRINNAAFEAVVVTNTIPQEDKMKHCSKIQVIDISMILAEAI 1056
A K+Y + THGI S A I ++ + VVVTNT+P E + C KI+ +DIS+IL+EAI
Sbjct: 306 AYKIYVMATHGILSAEAPRLIEESSIDEVVVTNTVPHEVQKLQCPKIKTVDISLILSEAI 365
Query: 1057 RRTHNGESVSYLFSHV 1104
RR HNGES++YLF ++
Sbjct: 366 RRIHNGESMAYLFRNI 381
>ref|XP_003358354.1| PREDICTED: phosphoribosyl pyrophosphate synthase-associated protein
2-like isoform 2 [Sus scrofa].
Length = 147
Score = 107 bits (268), Expect = 2e-23
Identities = 59/126 (46%), Positives = 89/126 (70%), Gaps = 3/126 (2%)
Frame = +1
Query: 154 TMPNIVLFSGSSHQ---DLSQRVADRLGLELGKVVTKKFSNQETSVEIGESVRGEDVYII 324
T +VLFS +S+ +LS+++A+RLG+E+GKV + ++ET V+I ESVRG+DV+II
Sbjct: 16 TKGGLVLFSANSNSSCMELSKKIAERLGVEMGKVQVYQEPDRETRVQIQESVRGKDVFII 75
Query: 325 QSGCGEINDNLMELLIMINACKIASSSRVTAVIPCFPYARQDKKDKSRAPISAKLVANML 504
Q+ ++N +MELLIM+ ACK + + VT VIP FPY++Q K K R I +KL+A+M+
Sbjct: 76 QTVSKDVNTTIMELLIMVYACKTSCAKSVTGVIPYFPYSKQCKMRK-RGSIVSKLLASMM 134
Query: 505 SVAGAD 522
AG +
Sbjct: 135 CKAGRE 140
>ref|XP_003132086.2| PREDICTED: phosphoribosyl pyrophosphate synthase-associated protein
2-like isoform 1 [Sus scrofa].
Length = 147
Score = 107 bits (268), Expect = 2e-23
Identities = 59/126 (46%), Positives = 89/126 (70%), Gaps = 3/126 (2%)
Frame = +1
Query: 154 TMPNIVLFSGSSHQ---DLSQRVADRLGLELGKVVTKKFSNQETSVEIGESVRGEDVYII 324
T +VLFS +S+ +LS+++A+RLG+E+GKV + ++ET V+I ESVRG+DV+II
Sbjct: 16 TKGGLVLFSANSNSSCMELSKKIAERLGVEMGKVQVYQEPDRETRVQIQESVRGKDVFII 75
Query: 325 QSGCGEINDNLMELLIMINACKIASSSRVTAVIPCFPYARQDKKDKSRAPISAKLVANML 504
Q+ ++N +MELLIM+ ACK + + VT VIP FPY++Q K K R I +KL+A+M+
Sbjct: 76 QTVSKDVNTTIMELLIMVYACKTSCAKSVTGVIPYFPYSKQCKMRK-RGSIVSKLLASMM 134
Query: 505 SVAGAD 522
AG +
Sbjct: 135 CKAGRE 140
>ref|XP_003361489.1| PREDICTED: phosphoribosyl pyrophosphate synthase-associated protein
2-like [Sus scrofa].
Length = 175
Score = 107 bits (267), Expect = 2e-23
Identities = 59/124 (47%), Positives = 88/124 (70%), Gaps = 3/124 (2%)
Frame = +1
Query: 154 TMPNIVLFSGSSHQ---DLSQRVADRLGLELGKVVTKKFSNQETSVEIGESVRGEDVYII 324
T +VLFS +S+ +LS+++A+RLG+E+GKV + ++ET V+I ESVRG+DV+II
Sbjct: 16 TKGGLVLFSANSNSSCMELSKKIAERLGVEMGKVQVYQEPDRETRVQIQESVRGKDVFII 75
Query: 325 QSGCGEINDNLMELLIMINACKIASSSRVTAVIPCFPYARQDKKDKSRAPISAKLVANML 504
Q+ ++N +MELLIM+ ACK + + VT VIP FPY++Q K K R I +KL+A+M+
Sbjct: 76 QTVSKDVNTTIMELLIMVYACKTSCAKSVTGVIPYFPYSKQCKMRK-RGSIVSKLLASMM 134
Query: 505 SVAG 516
AG
Sbjct: 135 CKAG 138
>ref|XP_003132090.2| PREDICTED: hypothetical protein LOC100511960 [Sus scrofa].
Length = 459
Score = 49.3 bits (116), Expect = 7e-06
Identities = 24/63 (38%), Positives = 37/63 (58%)
Frame = +1
Query: 769 MVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAGATKVYAILTHGIFSGPAISRINNA 948
+ +VGDV R+AI+VDD+ D + AA+ L GA K++ + THG+ S A I +
Sbjct: 395 ITVVGDVGGRIAIIVDDIIDDVDSFLAAAETLKERGAYKIFVMATHGLLSSDAPRLIEES 454
Query: 949 AFE 957
A +
Sbjct: 455 AID 457
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 43,626,295
Number of extensions: 1135263
Number of successful extensions: 3410
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 3405
Number of HSP's successfully gapped: 9
Length of query: 619
Length of database: 11,343,932
Length adjustment: 105
Effective length of query: 514
Effective length of database: 8,729,747
Effective search space: 4487089958
Effective search space used: 4487089958
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002551
(1859 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_ChrX 1614 0.0
Sscrofa_Chr09 321 8e-85
>Sscrofa_ChrX
|| Length = 144288218
Score = 1614 bits (814), Expect = 0.0
Identities = 834/841 (99%)
Strand = Plus / Plus
Query: 1019 aggttatcgacatttcgatgatcttggccgaggccatccgcaggacccacaacggcgaat 1078
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10429766 aggttatcgacatttcgatgatcttggccgaggccatccgcaggacccacaacggcgaat 10429825
Query: 1079 ctgtgtcttacctgttcagccacgtcccgctctaaggccaggatgggaggtgtggagcaa 1138
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10429826 ctgtgtcttacctgttcagccacgtcccgctctaaggccaggatgggaggtgtggagcaa 10429885
Query: 1139 gcctgagctggcttctgactcgcgtgcatttgtctgatgttttctttagctttagaactg 1198
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10429886 gcctgagctggcttctgactcgcgtgcatttgtctgatgttttctttagctttagaactg 10429945
Query: 1199 agtagttatattaatgcagaagcatcagaactttgtgtgctccccagcccagtgtttctc 1258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10429946 agtagttatattaatgcagaagcatcagaactttgtgtgctccccagcccagtgtttctc 10430005
Query: 1259 cttctaaagctcttgaccgttgatttccagtttgctggggagggcggtggtttatttgat 1318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10430006 cttctaaagctcttgaccgttgatttccagtttgctggggagggcggtggtttatttgat 10430065
Query: 1319 ctttaagtgcacagccttcaatgagaagtatttttgtcgtcttgacctgttctgataggt 1378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10430066 ctttaagtgcacagccttcaatgagaagtatttttgtcgtcttgacctgttctgataggt 10430125
Query: 1379 gaccttttcctttgttctggcagtacttggaggccacaacttaagtgcatgttgccattc 1438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10430126 gaccttttcctttgttctggcagtacttggaggccacaacttaagtgcatgttgccattc 10430185
Query: 1439 tggaagttcatagtttatgtgtttcggggttgccaaaggtcacgtcagattaaagcctct 1498
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10430186 tggaagttcatagtttatgtgtttcggggttgccaaaggtcacgtcagattaaagcctct 10430245
Query: 1499 gtgtaaatataaaatgacaatgcctatggacattcggataacacctcgtagagaattagc 1558
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 10430246 gtgtaaatataaaatgacaatgcctatggacattcggataacaccttgtagagaattagc 10430305
Query: 1559 cttttacttctgagtcaacctttagaaaatgtgtaataccctgagtgttgaatatttgtt 1618
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10430306 cttttacttctgagtcaacctttagaaaatgtgtaataccctgagtgttgaatatttgtt 10430365
Query: 1619 tcactgatcaggtttccaataaaccctttgggccattatgctgaatttagaccaaatttt 1678
||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 10430366 tcagtgatcaggtttccaataaaccctttgggccattgtgctgaatttagaccaaatttt 10430425
Query: 1679 atgtagctgaaggtggccactgacacatcgattttgggtaaacattaaacctatcagagg 1738
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 10430426 atgtagctgaaggtggccactgacacatcgattttgggtaaacattagacctatcagagg 10430485
Query: 1739 cagtgtaattcagaattttttctgtggccacttttgaaaaacatgactatcacttacgtg 1798
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10430486 cagtgtaattcagaattttttctgtggccacttttgaaaaacatgactatcacttacgtg 10430545
Query: 1799 ncatatcatgttctcaaactccaaaattgtgttcagcggtagatctgattgaggaactgt 1858
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10430546 caatatcatgttctcgaactccaaaattgtgttcagcggtagatctgattgaggaactgt 10430605
Query: 1859 t 1859
|
Sbjct: 10430606 t 10430606
Score = 480 bits (242), Expect = e-132
Identities = 242/242 (100%)
Strand = Plus / Plus
Query: 37 agctcctcttagctccgctcctgctggtgtcctccactcgcgctttcccgctctcgtcgg 96
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10404827 agctcctcttagctccgctcctgctggtgtcctccactcgcgctttcccgctctcgtcgg 10404886
Query: 97 ggcctcccgtgcttctgccgcctgtgccgccccgcgccgcttgtagccccgcgcgcaacc 156
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10404887 ggcctcccgtgcttctgccgcctgtgccgccccgcgccgcttgtagccccgcgcgcaacc 10404946
Query: 157 atgcccaacatcgtgctcttcagcggcagctcgcaccaggacctgtcccagcgcgtggcc 216
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10404947 atgcccaacatcgtgctcttcagcggcagctcgcaccaggacctgtcccagcgcgtggcc 10405006
Query: 217 gaccggctcggcctggagctgggcaaggtggtcaccaagaagttcagcaaccaggagacc 276
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10405007 gaccggctcggcctggagctgggcaaggtggtcaccaagaagttcagcaaccaggagacc 10405066
Query: 277 ag 278
||
Sbjct: 10405067 ag 10405068
Score = 369 bits (186), Expect = 4e-99
Identities = 186/186 (100%)
Strand = Plus / Plus
Query: 277 agcgtggagattggcgaaagcgtgaggggggaggatgtgtacatcatccagagtggctgc 336
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10411137 agcgtggagattggcgaaagcgtgaggggggaggatgtgtacatcatccagagtggctgc 10411196
Query: 337 ggcgaaatcaacgacaacctgatggagctgctcatcatgatcaacgcctgcaagatcgcc 396
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10411197 ggcgaaatcaacgacaacctgatggagctgctcatcatgatcaacgcctgcaagatcgcc 10411256
Query: 397 tcctcctccagggtgaccgccgtgatcccatgcttcccctacgcccggcaagacaaaaag 456
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10411257 tcctcctccagggtgaccgccgtgatcccatgcttcccctacgcccggcaagacaaaaag 10411316
Query: 457 gacaag 462
||||||
Sbjct: 10411317 gacaag 10411322
Score = 351 bits (177), Expect = 9e-94
Identities = 177/177 (100%)
Strand = Plus / Plus
Query: 685 agggtcacgtcaattgcagacaggttgaatgtggagtttgccttgattcacaaggagagg 744
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10426748 agggtcacgtcaattgcagacaggttgaatgtggagtttgccttgattcacaaggagagg 10426807
Query: 745 aagaaggcgaatgaagtggaccggatggtcctggtgggcgacgtgaaggaccgagtggcc 804
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10426808 aagaaggcgaatgaagtggaccggatggtcctggtgggcgacgtgaaggaccgagtggcc 10426867
Query: 805 atccttgtggatgacatggctgacacgtgtggcaccatctgccatgctgcagacaag 861
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10426868 atccttgtggatgacatggctgacacgtgtggcaccatctgccatgctgcagacaag 10426924
Score = 321 bits (162), Expect = 8e-85
Identities = 162/162 (100%)
Strand = Plus / Plus
Query: 861 gctactctctgccggagccaccaaagtatatgctatccttacccatgggatcttctctgg 920
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10427504 gctactctctgccggagccaccaaagtatatgctatccttacccatgggatcttctctgg 10427563
Query: 921 gccagctatttccagaataaataatgccgcctttgaggctgttgttgtcaccaacaccat 980
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10427564 gccagctatttccagaataaataatgccgcctttgaggctgttgttgtcaccaacaccat 10427623
Query: 981 tccacaagaggacaaaatgaagcactgctccaagattcaggt 1022
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10427624 tccacaagaggacaaaatgaagcactgctccaagattcaggt 10427665
Score = 254 bits (128), Expect = 2e-64
Identities = 128/128 (100%)
Strand = Plus / Plus
Query: 560 agggcttctttgatatccccgtggacaacttgtacgcggagcccgcggtcctgcagtgga 619
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10419469 agggcttctttgatatccccgtggacaacttgtacgcggagcccgcggtcctgcagtgga 10419528
Query: 620 ttcgggagaacatcgccgagtggaggaactgcatcatcgtttcccctgatgccggcggcg 679
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10419529 ttcgggagaacatcgccgagtggaggaactgcatcatcgtttcccctgatgccggcggcg 10419588
Query: 680 ccaaaagg 687
||||||||
Sbjct: 10419589 ccaaaagg 10419596
Score = 202 bits (102), Expect = 5e-49
Identities = 102/102 (100%)
Strand = Plus / Plus
Query: 461 agagtcgtgctccgatttcagcaaaacttgtggccaatatgctgtcggtggctggggcag 520
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10418104 agagtcgtgctccgatttcagcaaaacttgtggccaatatgctgtcggtggctggggcag 10418163
Query: 521 atcacatcatcaccatggacctgcatgcctctcagatccagg 562
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10418164 atcacatcatcaccatggacctgcatgcctctcagatccagg 10418205
Score = 170 bits (86), Expect = 2e-39
Identities = 143/162 (88%)
Strand = Plus / Plus
Query: 700 gcagacaggttgaatgtggagtttgccttgattcacaaggagaggaagaaggcgaatgaa 759
|||||| || |||||||||| || |||||||||||||| || |||||||||| ||||||
Sbjct: 102535453 gcagaccggctgaatgtggacttcgccttgattcacaaagaacggaagaaggccaatgaa 102535512
Query: 760 gtggaccggatggtcctggtgggcgacgtgaaggaccgagtggccatccttgtggatgac 819
|| ||||| ||||| |||||||| || ||||||||||| |||||||||||||||||||||
Sbjct: 102535513 gttgaccgcatggtgctggtgggggatgtgaaggaccgggtggccatccttgtggatgac 102535572
Query: 820 atggctgacacgtgtggcaccatctgccatgctgcagacaag 861
||||||||||| ||||| || ||||||||||| || ||||||
Sbjct: 102535573 atggctgacacttgtgggacaatctgccatgcagctgacaag 102535614
Score = 109 bits (55), Expect = 6e-21
Identities = 91/103 (88%)
Strand = Plus / Plus
Query: 173 tcttcagcggcagctcgcaccaggacctgtcccagcgcgtggccgaccggctcggcctgg 232
|||||||||||||||| ||||||||||| |||||| | |||||||| ||||||||||
Sbjct: 102515358 tcttcagcggcagctcccaccaggacctatcccagaaaattgccgaccgcctcggcctgg 102515417
Query: 233 agctgggcaaggtggtcaccaagaagttcagcaaccaggagac 275
| |||||||||||||| || ||||| |||||||||||||||||
Sbjct: 102515418 aactgggcaaggtggtgactaagaaattcagcaaccaggagac 102515460
Score = 75.8 bits (38), Expect = 8e-11
Identities = 80/94 (85%)
Strand = Plus / Plus
Query: 559 cagggcttctttgatatccccgtggacaacttgtacgcggagcccgcggtcctgcagtgg 618
|||||||| ||||||||||| |||||||| ||||| || ||||| || ||||| |||||
Sbjct: 102531991 cagggcttttttgatatcccagtggacaatttgtatgcagagccagctgtcctcaagtgg 102532050
Query: 619 attcgggagaacatcgccgagtggaggaactgca 652
|| | ||||||||| | ||||||||||||||||
Sbjct: 102532051 ataagagagaacatctctgagtggaggaactgca 102532084
Score = 67.9 bits (34), Expect = 2e-08
Identities = 73/86 (84%)
Strand = Plus / Plus
Query: 469 gctccgatttcagcaaaacttgtggccaatatgctgtcggtggctggggcagatcacatc 528
||||| || ||||| |||||||| || |||||||| || || || || |||||||||||
Sbjct: 102530487 gctccaatctcagccaaacttgttgcaaatatgctctcagtagcaggcgcagatcacatt 102530546
Query: 529 atcaccatggacctgcatgcctctca 554
||||| |||||||||||||| |||||
Sbjct: 102530547 atcacgatggacctgcatgcttctca 102530572
Score = 65.9 bits (33), Expect = 7e-08
Identities = 93/113 (82%)
Strand = Plus / Plus
Query: 280 gtggagattggcgaaagcgtgaggggggaggatgtgtacatcatccagagtggctgcggc 339
||||| || |||||||| ||| | || |||||||| ||||| | ||||||||||| |||
Sbjct: 102529263 gtggaaatcggcgaaagtgtgcgtggagaggatgtctacattgttcagagtggctgtggc 102529322
Query: 340 gaaatcaacgacaacctgatggagctgctcatcatgatcaacgcctgcaagat 392
|||||||| ||||| || ||||| || | |||||||| || |||||||||||
Sbjct: 102529323 gaaatcaatgacaatctcatggaacttttgatcatgattaatgcctgcaagat 102529375
>Sscrofa_Chr09
|| Length = 153670197
Score = 321 bits (162), Expect = 8e-85
Identities = 696/874 (79%)
Strand = Plus / Minus
Query: 233 agctgggcaaggtggtcaccaagaagttcagcaaccaggagaccagcgtggagattggcg 292
|||| ||||||||||| || ||||| |||||||||||||||||| | ||||| ||||| |
Sbjct: 96259654 agctaggcaaggtggtgacgaagaaattcagcaaccaggagacctgtgtggaaattggtg 96259595
Query: 293 aaagcgtgaggggggaggatgtgtacatcatccagagtggctgcggcgaaatcaacgaca 352
| || ||| | || || ||||| ||||| || |||||||| || || |||||||||||||
Sbjct: 96259594 agagtgtgcgaggagaagatgtctacataatgcagagtggttgtggtgaaatcaacgaca 96259535
Query: 353 acctgatggagctgctcatcatgatcaacgcctgcaagatcgcctcctcctccagggtga 412
| ||||||||||| | |||||||| || |||||||||| || || || |||| |
Sbjct: 96259534 atctgatggagcttttgatcatgattaatgcctgcaagactgcttcagccagtcgggtaa 96259475
Query: 413 ccgccgtgatcccatgcttcccctacgcccggcaagacaaaaaggacaagagtcgtgctc 472
| || || ||||| |||||||| || |||||||| || || ||||| |||| | || |
Sbjct: 96259474 ctgcagtcatcccctgcttcccgtatgcccggcaggataagaaggataagaaccaggcgc 96259415
Query: 473 cgatttcagcaaaacttgtggccaatatgctgtcggtggctggggcagatcacatcatca 532
| || || || || ||||| || ||||||||||| || || || ||||||||||||||||
Sbjct: 96259414 caatctctgccaagcttgttgcaaatatgctgtctgtagcaggagcagatcacatcatca 96259355
Query: 533 ccatggacctgcatgcctctcagatccagggcttctttgatatccccgtggacaacttgt 592
||||||| | ||||| ||||| || |||||||| ||||||||||| || ||||| ||||
Sbjct: 96259354 ccatggatttacatgcttctcaaattcagggcttttttgatatcccagtagacaatttgt 96259295
Query: 593 acgcggagcccgcggtcctgcagtggattcgggagaacatcgccgagtggaggaactgca 652
| || ||||| || |||||| ||||||| |||||| ||| | ||||||||||| ||||
Sbjct: 96259294 atgcagagccagctgtcctgaagtggataaaggagaatatctctgagtggaggaattgca 96259235
Query: 653 tcatcgtttcccctgatgccggcggcgccaaaagggtcacgtcaattgcagacaggttga 712
|| || ||||| ||||| | || || || || || || || ||||||||||| ||||
Sbjct: 96259234 caattgtctccccagatgctgatggagctaagagagtgacttccattgcagacagattga 96259175
Query: 713 atgtggagtttgccttgattcacaaggagaggaagaaggcgaatgaagtggaccggatgg 772
||||||| ||||||||||||||||| || | |||||||| |||||||| |||| ||||
Sbjct: 96259174 atgtggactttgccttgattcacaaagaaaaaaagaaggccaatgaagtaaaccgaatgg 96259115
Query: 773 tcctggtgggcgacgtgaaggaccgagtggccatccttgtggatgacatggctgacacgt 832
| || ||||| || ||||| || || ||||| ||||||||||||||||| |||||||| |
Sbjct: 96259114 tgctagtgggagatgtgaaagatcgtgtggctatccttgtggatgacatagctgacactt 96259055
Query: 833 gtggcaccatctgccatgctgcagacaagctactctctgccggagccaccaaagtatatg 892
||||||| ||||||||||| || ||||| || ||||| || ||||||| || ||| ||||
Sbjct: 96259054 gtggcacaatctgccatgcagctgacaaacttctctcagctggagccatcagagtttatg 96258995
Query: 893 ctatccttacccatgggatcttctctgggccagctatttccagaataaataatgccgcct 952
| ||| | | ||||| ||||| ||||| ||||| ||| | || || | ||| ||
Sbjct: 96258994 caatcttgtctcatggaatcttttctggtccagccattactcacatcaacagtgcatgct 96258935
Query: 953 ttgaggctgttgttgtcaccaacaccattccacaagaggacaaaatgaagcactgctcca 1012
|||| || || || |||||||||||||| || || || || || ||||||| |||||||
Sbjct: 96258934 ttgaagcagtagtagtcaccaacaccatacctcaggaagataagatgaagcgttgctcca 96258875
Query: 1013 agattcaggttatcgacatttcgatgatcttggccgaggccatccgcaggacccacaacg 1072
| || |||||||||||||| || |||||| | || || |||||| | || || ||||| |
Sbjct: 96258874 aaatacaggttatcgacatctccatgatccttgcagaagccatcagaagaactcacaatg 96258815
Query: 1073 gcgaatctgtgtcttacctgttcagccacgtccc 1106
| |||||||| || |||||||||||||| |||||
Sbjct: 96258814 gggaatctgtctcctacctgttcagccatgtccc 96258781
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 51,372,405
Number of extensions: 325
Number of successful extensions: 325
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 324
Number of HSP's successfully gapped: 16
Length of query: 1859
Length of database: 2,808,509,378
Length adjustment: 22
Effective length of query: 1837
Effective length of database: 2,808,408,574
Effective search space: 5159046550438
Effective search space used: 5159046550438
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)