Animal-Genome cDNA 20110601C-002609

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-002609
         (2281 letters)

Database: RefSeq49_BP.fasta 
           33,088 sequences; 17,681,374 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_777136.1| casein kinase I isoform alpha [Bos taurus].          580   e-165
Alignment   gi|XP_002689948.1| PREDICTED: casein kinase I alpha-like [Bos t...   557   e-158
Alignment   gi|XP_002699872.1| PREDICTED: casein kinase I-like [Bos taurus].     505   e-143
Alignment   gi|XP_002707254.1| PREDICTED: casein kinase I-like [Bos taurus].     505   e-143
Alignment   gi|XP_002700117.1| PREDICTED: casein kinase I-like [Bos taurus].     471   e-132
Alignment   gi|XP_001788962.1| PREDICTED: casein kinase I-like [Bos taurus].     471   e-132
Alignment   gi|NP_001091628.1| casein kinase I isoform beta [Bos taurus].        452   e-127
Alignment   gi|NP_001071577.1| casein kinase 1 epsilon [Bos taurus].             447   e-125
Alignment   gi|NP_001095550.1| casein kinase 1, delta [Bos taurus].              445   e-125
Alignment   gi|NP_001033235.1| casein kinase I isoform gamma-1 [Bos taurus].     313   3e-85

>ref|NP_777136.1| casein kinase I isoform alpha [Bos taurus].
          Length = 325

 Score =  580 bits (1496), Expect = e-165
 Identities = 287/318 (90%), Positives = 287/318 (90%)
 Frame = +2

Query: 428  KAEFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKIL 607
            KAEFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKIL
Sbjct: 8    KAEFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKIL 67

Query: 608  QGGVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYV 787
            QGGVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYV
Sbjct: 68   QGGVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYV 127

Query: 788  HTKNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARY 967
            HTKNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARY
Sbjct: 128  HTKNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARY 187

Query: 968  ASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATXXXXXXXXXXXXMSTPVEV 1147
            ASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAAT            MSTPVEV
Sbjct: 188  ASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATKKQKYEKISEKKMSTPVEV 247

Query: 1148 LCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTMLXXXXXX 1327
            LCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTML      
Sbjct: 248  LCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTMLKQKAAQ 307

Query: 1328 XXXXXXXXXXXXXTPTGF 1381
                         TPTGF
Sbjct: 308  QAASSSGQGQQAQTPTGF 325


>ref|XP_002689948.1| PREDICTED: casein kinase I alpha-like [Bos taurus].
          Length = 325

 Score =  557 bits (1435), Expect = e-158
 Identities = 276/318 (86%), Positives = 280/318 (88%)
 Frame = +2

Query: 428  KAEFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKIL 607
            KAEFIVGGKYKLVRKI SGSFGD+YLAINITNGEEVAVKLESQKARHPQLLYESKL KIL
Sbjct: 8    KAEFIVGGKYKLVRKIRSGSFGDMYLAINITNGEEVAVKLESQKARHPQLLYESKLCKIL 67

Query: 608  QGGVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYV 787
            QG VGIPHIRWYGQ+KDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQM+ RIEYV
Sbjct: 68   QGEVGIPHIRWYGQQKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMMGRIEYV 127

Query: 788  HTKNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARY 967
            HTKNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARY
Sbjct: 128  HTKNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARY 187

Query: 968  ASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATXXXXXXXXXXXXMSTPVEV 1147
            ASI+AHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAAT            MSTPVEV
Sbjct: 188  ASISAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATKKQKYEKISEKKMSTPVEV 247

Query: 1148 LCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTMLXXXXXX 1327
            LCKGFPAEFAMYLNYCRGLRFEEAPDYMYLR LF ILFRTLNHQYDYT DWTML      
Sbjct: 248  LCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRHLFHILFRTLNHQYDYTSDWTMLKQKAAQ 307

Query: 1328 XXXXXXXXXXXXXTPTGF 1381
                         TPTGF
Sbjct: 308  QAASSSGQGQQAQTPTGF 325


>ref|XP_002699872.1| PREDICTED: casein kinase I-like [Bos taurus].
          Length = 333

 Score =  505 bits (1301), Expect = e-143
 Identities = 238/293 (81%), Positives = 264/293 (90%)
 Frame = +2

Query: 428  KAEFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKIL 607
            ++EFI GGKYKLVRKIGSGSFG +YLAINITNGEEVAVKLE QKAR PQLLYES+LYK+L
Sbjct: 8    RSEFIAGGKYKLVRKIGSGSFGKVYLAINITNGEEVAVKLEPQKARQPQLLYESRLYKLL 67

Query: 608  QGGVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYV 787
            QGGVGIP I WYGQEKDYNVLVMDLLGPSLE+LFN+CSRRFTMKTVLMLADQMISRIEY+
Sbjct: 68   QGGVGIPRIWWYGQEKDYNVLVMDLLGPSLEELFNYCSRRFTMKTVLMLADQMISRIEYL 127

Query: 788  HTKNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARY 967
            HTK+FIHRDIKPDNFLMG G HCN+LFL+DFGLAK+YRD++T+QHIPY+E K+LTGTARY
Sbjct: 128  HTKDFIHRDIKPDNFLMGAGSHCNQLFLVDFGLAKRYRDSKTKQHIPYKEKKSLTGTARY 187

Query: 968  ASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATXXXXXXXXXXXXMSTPVEV 1147
            AS+N+HLGIEQSRRDDMESLGYVLMYFNR+SLPWQG+K AT            M+TP+E 
Sbjct: 188  ASLNSHLGIEQSRRDDMESLGYVLMYFNRSSLPWQGIKTATMKQKYEKICESKMATPIEA 247

Query: 1148 LCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTM 1306
            LC GFP+EFA YLNYCRGLRFEEAPDY YLRQLFR LFRTLN+QYDY FDW +
Sbjct: 248  LCNGFPSEFATYLNYCRGLRFEEAPDYTYLRQLFRSLFRTLNYQYDYAFDWIL 300


>ref|XP_002707254.1| PREDICTED: casein kinase I-like [Bos taurus].
          Length = 333

 Score =  505 bits (1301), Expect = e-143
 Identities = 238/293 (81%), Positives = 264/293 (90%)
 Frame = +2

Query: 428  KAEFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKIL 607
            ++EFI GGKYKLVRKIGSGSFG +YLAINITNGEEVAVKLE QKAR PQLLYES+LYK+L
Sbjct: 8    RSEFIAGGKYKLVRKIGSGSFGKVYLAINITNGEEVAVKLEPQKARQPQLLYESRLYKLL 67

Query: 608  QGGVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYV 787
            QGGVGIP I WYGQEKDYNVLVMDLLGPSLE+LFN+CSRRFTMKTVLMLADQMISRIEY+
Sbjct: 68   QGGVGIPRIWWYGQEKDYNVLVMDLLGPSLEELFNYCSRRFTMKTVLMLADQMISRIEYL 127

Query: 788  HTKNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARY 967
            HTK+FIHRDIKPDNFLMG G HCN+LFL+DFGLAK+YRD++T+QHIPY+E K+LTGTARY
Sbjct: 128  HTKDFIHRDIKPDNFLMGAGSHCNQLFLVDFGLAKRYRDSKTKQHIPYKEKKSLTGTARY 187

Query: 968  ASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATXXXXXXXXXXXXMSTPVEV 1147
            AS+N+HLGIEQSRRDDMESLGYVLMYFNR+SLPWQG+K AT            M+TP+E 
Sbjct: 188  ASLNSHLGIEQSRRDDMESLGYVLMYFNRSSLPWQGIKTATMKQKYEKICESKMATPIEA 247

Query: 1148 LCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTM 1306
            LC GFP+EFA YLNYCRGLRFEEAPDY YLRQLFR LFRTLN+QYDY FDW +
Sbjct: 248  LCNGFPSEFATYLNYCRGLRFEEAPDYTYLRQLFRSLFRTLNYQYDYAFDWIL 300


>ref|XP_002700117.1| PREDICTED: casein kinase I-like [Bos taurus].
          Length = 336

 Score =  471 bits (1212), Expect = e-132
 Identities = 230/317 (72%), Positives = 258/317 (81%)
 Frame = +2

Query: 428  KAEFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKIL 607
            KA+ +VGG+YKLVR+IGSGSFG ++LAI++TN E+VAVKLESQ  R P+LLYE +LY IL
Sbjct: 8    KADVLVGGRYKLVREIGSGSFGHVHLAIDLTNHEQVAVKLESQNTRQPRLLYEKELYNIL 67

Query: 608  QGGVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYV 787
            QGGVGIP IRWYGQE DYNVLVMDLLGPSLEDLFNFCSRRF+MKTVLMLADQMISRIEYV
Sbjct: 68   QGGVGIPQIRWYGQETDYNVLVMDLLGPSLEDLFNFCSRRFSMKTVLMLADQMISRIEYV 127

Query: 788  HTKNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARY 967
            HT+N IHRDIKP+NFLMG G+   +LFLIDFGLAKKYRDNRT QHIPYR  K+LTGT  +
Sbjct: 128  HTQNLIHRDIKPENFLMGTGQQWKELFLIDFGLAKKYRDNRTGQHIPYRSGKSLTGTPSF 187

Query: 968  ASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATXXXXXXXXXXXXMSTPVEV 1147
            ASI+AH+GIEQSRRDDMES+G+VLMYFNR SLPWQGLKAAT            M+TPV+V
Sbjct: 188  ASISAHIGIEQSRRDDMESIGHVLMYFNRGSLPWQGLKAATMKQKCEQISEMKMTTPVDV 247

Query: 1148 LCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTMLXXXXXX 1327
            LCKGFPAEFAMYL +CRGL FEEAPDY YLRQLF +LFR LN+QYDY FDW +L      
Sbjct: 248  LCKGFPAEFAMYLKHCRGLSFEEAPDYRYLRQLFHMLFRKLNYQYDYAFDWIVLKQKAEQ 307

Query: 1328 XXXXXXXXXXXXXTPTG 1378
                         TPTG
Sbjct: 308  QAASSSGEGQQAQTPTG 324


>ref|XP_001788962.1| PREDICTED: casein kinase I-like [Bos taurus].
          Length = 336

 Score =  471 bits (1212), Expect = e-132
 Identities = 230/317 (72%), Positives = 258/317 (81%)
 Frame = +2

Query: 428  KAEFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKIL 607
            KA+ +VGG+YKLVR+IGSGSFG ++LAI++TN E+VAVKLESQ  R P+LLYE +LY IL
Sbjct: 8    KADVLVGGRYKLVREIGSGSFGHVHLAIDLTNHEQVAVKLESQNTRQPRLLYEKELYNIL 67

Query: 608  QGGVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYV 787
            QGGVGIP IRWYGQE DYNVLVMDLLGPSLEDLFNFCSRRF+MKTVLMLADQMISRIEYV
Sbjct: 68   QGGVGIPQIRWYGQETDYNVLVMDLLGPSLEDLFNFCSRRFSMKTVLMLADQMISRIEYV 127

Query: 788  HTKNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARY 967
            HT+N IHRDIKP+NFLMG G+   +LFLIDFGLAKKYRDNRT QHIPYR  K+LTGT  +
Sbjct: 128  HTQNLIHRDIKPENFLMGTGQQWKELFLIDFGLAKKYRDNRTGQHIPYRSGKSLTGTPSF 187

Query: 968  ASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATXXXXXXXXXXXXMSTPVEV 1147
            ASI+AH+GIEQSRRDDMES+G+VLMYFNR SLPWQGLKAAT            M+TPV+V
Sbjct: 188  ASISAHIGIEQSRRDDMESIGHVLMYFNRGSLPWQGLKAATMKQKCEQISEMKMTTPVDV 247

Query: 1148 LCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTMLXXXXXX 1327
            LCKGFPAEFAMYL +CRGL FEEAPDY YLRQLF +LFR LN+QYDY FDW +L      
Sbjct: 248  LCKGFPAEFAMYLKHCRGLSFEEAPDYRYLRQLFHMLFRKLNYQYDYAFDWIVLKQKAEQ 307

Query: 1328 XXXXXXXXXXXXXTPTG 1378
                         TPTG
Sbjct: 308  QAASSSGEGQQAQTPTG 324


>ref|NP_001091628.1| casein kinase I isoform beta [Bos taurus].
          Length = 336

 Score =  452 bits (1162), Expect = e-127
 Identities = 222/317 (70%), Positives = 249/317 (78%)
 Frame = +2

Query: 428  KAEFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKIL 607
            K + +VGG+YKLVR+IG GSFG +YLAI++TN E+VAVKLES+  R P+LL+E +LY  L
Sbjct: 8    KTDVLVGGRYKLVREIGFGSFGHVYLAIDLTNHEQVAVKLESENTRQPRLLHEKELYNFL 67

Query: 608  QGGVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYV 787
            QGGVGIP IRWYGQE DYNVLVMDLLGPSLEDLFNFCSRRF+MKTVLMLADQMISRIEYV
Sbjct: 68   QGGVGIPQIRWYGQETDYNVLVMDLLGPSLEDLFNFCSRRFSMKTVLMLADQMISRIEYV 127

Query: 788  HTKNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARY 967
            H++N IHRDIKPDNFLMG G    KLFL+DFGLAKKYRDNRT QHIP+R  K+  GT   
Sbjct: 128  HSRNLIHRDIKPDNFLMGTGPQWKKLFLVDFGLAKKYRDNRTGQHIPHRSGKSFIGTPFC 187

Query: 968  ASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATXXXXXXXXXXXXMSTPVEV 1147
            ASI+AHLGIEQSRRDDMES+GYVLMYFNR SLPWQGLKAAT            M+TPV+V
Sbjct: 188  ASISAHLGIEQSRRDDMESIGYVLMYFNRGSLPWQGLKAATLKQKCEKISEMKMTTPVDV 247

Query: 1148 LCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTMLXXXXXX 1327
            LCKGFP EFAMYL YC  L FEEAPDY YLRQLFR+LFR L++Q+DY FDW +L      
Sbjct: 248  LCKGFPIEFAMYLKYCLRLSFEEAPDYRYLRQLFRLLFRKLSYQHDYAFDWIVLKQKAEQ 307

Query: 1328 XXXXXXXXXXXXXTPTG 1378
                         TPTG
Sbjct: 308  QASSSSGEGQQAQTPTG 324


>ref|NP_001071577.1| casein kinase 1 epsilon [Bos taurus].
          Length = 466

 Score =  447 bits (1149), Expect = e-125
 Identities = 212/292 (72%), Positives = 242/292 (82%)
 Frame = +2

Query: 434  EFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKILQG 613
            E  VG KY+L RKIGSGSFGDIYL  NI +GEEVA+KLE  K +HPQL  ESK YK++QG
Sbjct: 2    ELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQG 61

Query: 614  GVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYVHT 793
            GVGIP I+W G E DYNV+VM+LLGPSLEDLFNFCSR+F++KTVL+LADQMISRIEY+H+
Sbjct: 62   GVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 121

Query: 794  KNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARYAS 973
            KNFIHRD+KPDNFLMG+G+  N +++IDFGLAKKYRD RT QHIPYRE+KNLTGTARYAS
Sbjct: 122  KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYAS 181

Query: 974  INAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATXXXXXXXXXXXXMSTPVEVLC 1153
            IN HLGIEQSRRDD+ESLGYVLMYFN  SLPWQGLKAAT            MSTP+EVLC
Sbjct: 182  INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLC 241

Query: 1154 KGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTML 1309
            KG+P+EF+ YLN+CR LRF++ PDY YLRQLFR LF      YDY FDW ML
Sbjct: 242  KGYPSEFSTYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNML 293


>ref|NP_001095550.1| casein kinase 1, delta [Bos taurus].
          Length = 409

 Score =  445 bits (1145), Expect = e-125
 Identities = 212/292 (72%), Positives = 242/292 (82%)
 Frame = +2

Query: 434  EFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKILQG 613
            E  VG +Y+L RKIGSGSFGDIYL  +I  GEEVA+KLE  K +HPQL  ESK+YK++QG
Sbjct: 2    ELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQG 61

Query: 614  GVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYVHT 793
            GVGIP IRW G E DYNV+VM+LLGPSLEDLFNFCSR+F++KTVL+LADQMISRIEY+H+
Sbjct: 62   GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 121

Query: 794  KNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARYAS 973
            KNFIHRD+KPDNFLMG+G+  N +++IDFGLAKKYRD RT QHIPYRE+KNLTGTARYAS
Sbjct: 122  KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYAS 181

Query: 974  INAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATXXXXXXXXXXXXMSTPVEVLC 1153
            IN HLGIEQSRRDD+ESLGYVLMYFN  SLPWQGLKAAT            MSTP+EVLC
Sbjct: 182  INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLC 241

Query: 1154 KGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTML 1309
            KG+P+EFA YLN+CR LRF++ PDY YLRQLFR LF      YDY FDW ML
Sbjct: 242  KGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNML 293


>ref|NP_001033235.1| casein kinase I isoform gamma-1 [Bos taurus].
          Length = 437

 Score =  313 bits (803), Expect = 3e-85
 Identities = 160/292 (54%), Positives = 204/292 (69%), Gaps = 5/292 (1%)
 Frame = +2

Query: 440  IVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKIL-QGG 616
            +VG  +++ +KIG G+FG++ L  N+   E VA+KLE  K+R PQL  E + YK L   G
Sbjct: 38   MVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPIKSRAPQLHLEYRFYKQLGSAG 97

Query: 617  VGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYVHTK 796
             G+P + ++G    YN +V++LLGPSLEDLF+ C R FT+KTVLM+A Q++SR+EYVH+K
Sbjct: 98   EGLPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFTLKTVLMIAIQLLSRMEYVHSK 157

Query: 797  NFIHRDIKPDNFLMGIGRHCNK----LFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTAR 964
            N I+RD+KP+NFL  IGR  NK    + +IDFGLAK+Y D  T++HIPYRE K+LTGTAR
Sbjct: 158  NLIYRDVKPENFL--IGRQGNKKEHVIHIIDFGLAKEYIDPETKKHIPYREHKSLTGTAR 215

Query: 965  YASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATXXXXXXXXXXXXMSTPVE 1144
            Y SIN HLG EQSRRDD+E+LG++ MYF R SLPWQGLKA T             +TPVE
Sbjct: 216  YMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRNTPVE 275

Query: 1145 VLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDW 1300
            VLC+ FP E A YL Y R L F E PDY YLR LF  LF    + +DY +DW
Sbjct: 276  VLCENFPEEMATYLRYVRRLDFFEKPDYEYLRTLFTDLFERKGYTFDYAYDW 327


  Database: RefSeq49_BP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 17,681,374
  Number of sequences in database:  33,088
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 77,333,661
Number of extensions: 1918053
Number of successful extensions: 7258
Number of sequences better than 1.0e-05: 187
Number of HSP's gapped: 6912
Number of HSP's successfully gapped: 187
Length of query: 760
Length of database: 17,681,374
Length adjustment: 110
Effective length of query: 650
Effective length of database: 14,041,694
Effective search space: 9127101100
Effective search space used: 9127101100
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-002609
         (2281 letters)

Database: RefSeq49_CP.fasta 
           33,336 sequences; 18,874,504 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_867771.1| PREDICTED: similar to casein kinase 1, alpha 1 ...   580   e-165
Alignment   gi|XP_536470.2| PREDICTED: similar to Casein kinase I, alpha is...   578   e-165
Alignment   gi|XP_867638.1| PREDICTED: similar to Casein kinase I, alpha is...   578   e-165
Alignment   gi|XP_867715.1| PREDICTED: similar to Casein kinase I, alpha is...   573   e-163
Alignment   gi|XP_867745.1| PREDICTED: similar to Casein kinase I, alpha is...   572   e-163
Alignment   gi|XP_867736.1| PREDICTED: similar to Casein kinase I, alpha is...   572   e-163
Alignment   gi|XP_867724.1| PREDICTED: similar to Casein kinase I, alpha is...   572   e-163
Alignment   gi|XP_867705.1| PREDICTED: similar to Casein kinase I, alpha is...   572   e-163
Alignment   gi|XP_867695.1| PREDICTED: similar to Casein kinase I, alpha is...   572   e-163
Alignment   gi|XP_853670.1| PREDICTED: similar to casein kinase 1, alpha 1 ...   563   e-160

>ref|XP_867771.1| PREDICTED: similar to casein kinase 1, alpha 1 isoform 15 [Canis
            familiaris].
          Length = 325

 Score =  580 bits (1496), Expect = e-165
 Identities = 287/318 (90%), Positives = 287/318 (90%)
 Frame = +2

Query: 428  KAEFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKIL 607
            KAEFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKIL
Sbjct: 8    KAEFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKIL 67

Query: 608  QGGVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYV 787
            QGGVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYV
Sbjct: 68   QGGVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYV 127

Query: 788  HTKNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARY 967
            HTKNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARY
Sbjct: 128  HTKNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARY 187

Query: 968  ASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATXXXXXXXXXXXXMSTPVEV 1147
            ASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAAT            MSTPVEV
Sbjct: 188  ASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATKKQKYEKISEKKMSTPVEV 247

Query: 1148 LCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTMLXXXXXX 1327
            LCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTML      
Sbjct: 248  LCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTMLKQKAAQ 307

Query: 1328 XXXXXXXXXXXXXTPTGF 1381
                         TPTGF
Sbjct: 308  QAASSSGQGQQAQTPTGF 325


>ref|XP_536470.2| PREDICTED: similar to Casein kinase I, alpha isoform (CKI-alpha)
            (CK1) isoform 1 [Canis familiaris].
          Length = 337

 Score =  578 bits (1490), Expect = e-165
 Identities = 286/317 (90%), Positives = 286/317 (90%)
 Frame = +2

Query: 428  KAEFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKIL 607
            KAEFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKIL
Sbjct: 8    KAEFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKIL 67

Query: 608  QGGVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYV 787
            QGGVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYV
Sbjct: 68   QGGVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYV 127

Query: 788  HTKNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARY 967
            HTKNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARY
Sbjct: 128  HTKNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARY 187

Query: 968  ASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATXXXXXXXXXXXXMSTPVEV 1147
            ASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAAT            MSTPVEV
Sbjct: 188  ASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATKKQKYEKISEKKMSTPVEV 247

Query: 1148 LCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTMLXXXXXX 1327
            LCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTML      
Sbjct: 248  LCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTMLKQKAAQ 307

Query: 1328 XXXXXXXXXXXXXTPTG 1378
                         TPTG
Sbjct: 308  QAASSSGQGQQAQTPTG 324


>ref|XP_867638.1| PREDICTED: similar to Casein kinase I, alpha isoform (CKI-alpha)
            (CK1) isoform 3 [Canis familiaris].
          Length = 336

 Score =  578 bits (1490), Expect = e-165
 Identities = 286/317 (90%), Positives = 286/317 (90%)
 Frame = +2

Query: 428  KAEFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKIL 607
            KAEFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKIL
Sbjct: 8    KAEFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKIL 67

Query: 608  QGGVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYV 787
            QGGVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYV
Sbjct: 68   QGGVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYV 127

Query: 788  HTKNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARY 967
            HTKNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARY
Sbjct: 128  HTKNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARY 187

Query: 968  ASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATXXXXXXXXXXXXMSTPVEV 1147
            ASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAAT            MSTPVEV
Sbjct: 188  ASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATKKQKYEKISEKKMSTPVEV 247

Query: 1148 LCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTMLXXXXXX 1327
            LCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTML      
Sbjct: 248  LCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTMLKQKAAQ 307

Query: 1328 XXXXXXXXXXXXXTPTG 1378
                         TPTG
Sbjct: 308  QAASSSGQGQQAQTPTG 324


>ref|XP_867715.1| PREDICTED: similar to Casein kinase I, alpha isoform (CKI-alpha)
            (CK1) isoform 10 [Canis familiaris].
          Length = 339

 Score =  573 bits (1477), Expect = e-163
 Identities = 286/319 (89%), Positives = 286/319 (89%), Gaps = 2/319 (0%)
 Frame = +2

Query: 428  KAEFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKIL 607
            KAEFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKIL
Sbjct: 8    KAEFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKIL 67

Query: 608  QGGVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYV 787
            QGGVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYV
Sbjct: 68   QGGVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYV 127

Query: 788  HTKNFIHRDIKPDNFLMGIGRHCNK--LFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTA 961
            HTKNFIHRDIKPDNFLMGIGRHCNK  LFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTA
Sbjct: 128  HTKNFIHRDIKPDNFLMGIGRHCNKNLLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTA 187

Query: 962  RYASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATXXXXXXXXXXXXMSTPV 1141
            RYASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAAT            MSTPV
Sbjct: 188  RYASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATKKQKYEKISEKKMSTPV 247

Query: 1142 EVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTMLXXXX 1321
            EVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTML    
Sbjct: 248  EVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTMLKQKA 307

Query: 1322 XXXXXXXXXXXXXXXTPTG 1378
                           TPTG
Sbjct: 308  AQQAASSSGQGQQAQTPTG 326


>ref|XP_867745.1| PREDICTED: similar to Casein kinase I, alpha isoform (CKI-alpha)
            (CK1) isoform 13 [Canis familiaris].
          Length = 341

 Score =  572 bits (1475), Expect = e-163
 Identities = 286/321 (89%), Positives = 286/321 (89%), Gaps = 4/321 (1%)
 Frame = +2

Query: 428  KAEFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKIL 607
            KAEFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKIL
Sbjct: 8    KAEFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKIL 67

Query: 608  QGGVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYV 787
            QGGVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYV
Sbjct: 68   QGGVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYV 127

Query: 788  HTKNFIHRDIKPDNFLMGIGRHCNK----LFLIDFGLAKKYRDNRTRQHIPYREDKNLTG 955
            HTKNFIHRDIKPDNFLMGIGRHCNK    LFLIDFGLAKKYRDNRTRQHIPYREDKNLTG
Sbjct: 128  HTKNFIHRDIKPDNFLMGIGRHCNKVRHILFLIDFGLAKKYRDNRTRQHIPYREDKNLTG 187

Query: 956  TARYASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATXXXXXXXXXXXXMST 1135
            TARYASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAAT            MST
Sbjct: 188  TARYASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATKKQKYEKISEKKMST 247

Query: 1136 PVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTMLXX 1315
            PVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTML  
Sbjct: 248  PVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTMLKQ 307

Query: 1316 XXXXXXXXXXXXXXXXXTPTG 1378
                             TPTG
Sbjct: 308  KAAQQAASSSGQGQQAQTPTG 328


>ref|XP_867736.1| PREDICTED: similar to Casein kinase I, alpha isoform (CKI-alpha)
            (CK1) isoform 12 [Canis familiaris].
          Length = 341

 Score =  572 bits (1475), Expect = e-163
 Identities = 286/321 (89%), Positives = 286/321 (89%), Gaps = 4/321 (1%)
 Frame = +2

Query: 428  KAEFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKIL 607
            KAEFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKIL
Sbjct: 8    KAEFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKIL 67

Query: 608  QGGVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYV 787
            QGGVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYV
Sbjct: 68   QGGVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYV 127

Query: 788  HTKNFIHRDIKPDNFLMGIGRHCNK----LFLIDFGLAKKYRDNRTRQHIPYREDKNLTG 955
            HTKNFIHRDIKPDNFLMGIGRHCNK    LFLIDFGLAKKYRDNRTRQHIPYREDKNLTG
Sbjct: 128  HTKNFIHRDIKPDNFLMGIGRHCNKTGSLLFLIDFGLAKKYRDNRTRQHIPYREDKNLTG 187

Query: 956  TARYASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATXXXXXXXXXXXXMST 1135
            TARYASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAAT            MST
Sbjct: 188  TARYASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATKKQKYEKISEKKMST 247

Query: 1136 PVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTMLXX 1315
            PVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTML  
Sbjct: 248  PVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTMLKQ 307

Query: 1316 XXXXXXXXXXXXXXXXXTPTG 1378
                             TPTG
Sbjct: 308  KAAQQAASSSGQGQQAQTPTG 328


>ref|XP_867724.1| PREDICTED: similar to Casein kinase I, alpha isoform (CKI-alpha)
            (CK1) isoform 11 [Canis familiaris].
          Length = 341

 Score =  572 bits (1475), Expect = e-163
 Identities = 286/321 (89%), Positives = 286/321 (89%), Gaps = 4/321 (1%)
 Frame = +2

Query: 428  KAEFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKIL 607
            KAEFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKIL
Sbjct: 8    KAEFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKIL 67

Query: 608  QGGVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYV 787
            QGGVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYV
Sbjct: 68   QGGVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYV 127

Query: 788  HTKNFIHRDIKPDNFLMGIGRHCNK----LFLIDFGLAKKYRDNRTRQHIPYREDKNLTG 955
            HTKNFIHRDIKPDNFLMGIGRHCNK    LFLIDFGLAKKYRDNRTRQHIPYREDKNLTG
Sbjct: 128  HTKNFIHRDIKPDNFLMGIGRHCNKHNHLLFLIDFGLAKKYRDNRTRQHIPYREDKNLTG 187

Query: 956  TARYASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATXXXXXXXXXXXXMST 1135
            TARYASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAAT            MST
Sbjct: 188  TARYASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATKKQKYEKISEKKMST 247

Query: 1136 PVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTMLXX 1315
            PVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTML  
Sbjct: 248  PVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTMLKQ 307

Query: 1316 XXXXXXXXXXXXXXXXXTPTG 1378
                             TPTG
Sbjct: 308  KAAQQAASSSGQGQQAQTPTG 328


>ref|XP_867705.1| PREDICTED: similar to Casein kinase I, alpha isoform (CKI-alpha)
            (CK1) isoform 9 [Canis familiaris].
          Length = 341

 Score =  572 bits (1475), Expect = e-163
 Identities = 286/321 (89%), Positives = 286/321 (89%), Gaps = 4/321 (1%)
 Frame = +2

Query: 428  KAEFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKIL 607
            KAEFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKIL
Sbjct: 8    KAEFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKIL 67

Query: 608  QGGVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYV 787
            QGGVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYV
Sbjct: 68   QGGVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYV 127

Query: 788  HTKNFIHRDIKPDNFLMGIGRHCNK----LFLIDFGLAKKYRDNRTRQHIPYREDKNLTG 955
            HTKNFIHRDIKPDNFLMGIGRHCNK    LFLIDFGLAKKYRDNRTRQHIPYREDKNLTG
Sbjct: 128  HTKNFIHRDIKPDNFLMGIGRHCNKRDPRLFLIDFGLAKKYRDNRTRQHIPYREDKNLTG 187

Query: 956  TARYASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATXXXXXXXXXXXXMST 1135
            TARYASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAAT            MST
Sbjct: 188  TARYASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATKKQKYEKISEKKMST 247

Query: 1136 PVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTMLXX 1315
            PVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTML  
Sbjct: 248  PVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTMLKQ 307

Query: 1316 XXXXXXXXXXXXXXXXXTPTG 1378
                             TPTG
Sbjct: 308  KAAQQAASSSGQGQQAQTPTG 328


>ref|XP_867695.1| PREDICTED: similar to Casein kinase I, alpha isoform (CKI-alpha)
            (CK1) isoform 8 [Canis familiaris].
          Length = 341

 Score =  572 bits (1475), Expect = e-163
 Identities = 286/321 (89%), Positives = 286/321 (89%), Gaps = 4/321 (1%)
 Frame = +2

Query: 428  KAEFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKIL 607
            KAEFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKIL
Sbjct: 8    KAEFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKIL 67

Query: 608  QGGVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYV 787
            QGGVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYV
Sbjct: 68   QGGVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYV 127

Query: 788  HTKNFIHRDIKPDNFLMGIGRHCNK----LFLIDFGLAKKYRDNRTRQHIPYREDKNLTG 955
            HTKNFIHRDIKPDNFLMGIGRHCNK    LFLIDFGLAKKYRDNRTRQHIPYREDKNLTG
Sbjct: 128  HTKNFIHRDIKPDNFLMGIGRHCNKVRQILFLIDFGLAKKYRDNRTRQHIPYREDKNLTG 187

Query: 956  TARYASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATXXXXXXXXXXXXMST 1135
            TARYASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAAT            MST
Sbjct: 188  TARYASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATKKQKYEKISEKKMST 247

Query: 1136 PVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTMLXX 1315
            PVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTML  
Sbjct: 248  PVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTMLKQ 307

Query: 1316 XXXXXXXXXXXXXXXXXTPTG 1378
                             TPTG
Sbjct: 308  KAAQQAASSSGQGQQAQTPTG 328


>ref|XP_853670.1| PREDICTED: similar to casein kinase 1, alpha 1 isoform 1 isoform 2
            [Canis familiaris].
          Length = 365

 Score =  563 bits (1451), Expect = e-160
 Identities = 286/345 (82%), Positives = 286/345 (82%), Gaps = 28/345 (8%)
 Frame = +2

Query: 428  KAEFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKIL 607
            KAEFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKIL
Sbjct: 8    KAEFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKIL 67

Query: 608  QGGVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYV 787
            QGGVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYV
Sbjct: 68   QGGVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYV 127

Query: 788  HTKNFIHRDIKPDNFLMGIGRHCNK----------------------------LFLIDFG 883
            HTKNFIHRDIKPDNFLMGIGRHCNK                            LFLIDFG
Sbjct: 128  HTKNFIHRDIKPDNFLMGIGRHCNKCLESPVGKRKRSMTVSTSQDPSFSGLNQLFLIDFG 187

Query: 884  LAKKYRDNRTRQHIPYREDKNLTGTARYASINAHLGIEQSRRDDMESLGYVLMYFNRTSL 1063
            LAKKYRDNRTRQHIPYREDKNLTGTARYASINAHLGIEQSRRDDMESLGYVLMYFNRTSL
Sbjct: 188  LAKKYRDNRTRQHIPYREDKNLTGTARYASINAHLGIEQSRRDDMESLGYVLMYFNRTSL 247

Query: 1064 PWQGLKAATXXXXXXXXXXXXMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQ 1243
            PWQGLKAAT            MSTPVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQ
Sbjct: 248  PWQGLKAATKKQKYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQ 307

Query: 1244 LFRILFRTLNHQYDYTFDWTMLXXXXXXXXXXXXXXXXXXXTPTG 1378
            LFRILFRTLNHQYDYTFDWTML                   TPTG
Sbjct: 308  LFRILFRTLNHQYDYTFDWTMLKQKAAQQAASSSGQGQQAQTPTG 352


  Database: RefSeq49_CP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,874,504
  Number of sequences in database:  33,336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 80,501,722
Number of extensions: 1959869
Number of successful extensions: 7746
Number of sequences better than 1.0e-05: 341
Number of HSP's gapped: 7221
Number of HSP's successfully gapped: 344
Length of query: 760
Length of database: 18,874,504
Length adjustment: 111
Effective length of query: 649
Effective length of database: 15,174,208
Effective search space: 9848060992
Effective search space used: 9848060992
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-002609
         (2281 letters)

Database: RefSeq49_HP.fasta 
           32,964 sequences; 18,297,164 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001883.4| casein kinase I isoform alpha isoform 2 [Homo s...   578   e-165
Alignment   gi|NP_001020276.1| casein kinase I isoform alpha isoform 1 [Hom...   563   e-160
Alignment   gi|NP_660204.2| casein kinase I isoform alpha-like [Homo sapien...   540   e-153
Alignment   gi|NP_689407.1| casein kinase I isoform epsilon [Homo sapiens].      447   e-125
Alignment   gi|NP_001885.1| casein kinase I isoform epsilon [Homo sapiens].      447   e-125
Alignment   gi|NP_620693.1| casein kinase I isoform delta isoform 2 [Homo s...   445   e-125
Alignment   gi|NP_001884.2| casein kinase I isoform delta isoform 1 [Homo s...   445   e-125
Alignment   gi|NP_001038188.1| casein kinase I isoform gamma-3 isoform 4 [H...   312   7e-85
Alignment   gi|NP_001038187.1| casein kinase I isoform gamma-3 isoform 3 [H...   312   7e-85
Alignment   gi|NP_001026982.1| casein kinase I isoform gamma-3 isoform 2 [H...   312   7e-85

>ref|NP_001883.4| casein kinase I isoform alpha isoform 2 [Homo sapiens].
          Length = 337

 Score =  578 bits (1490), Expect = e-165
 Identities = 286/317 (90%), Positives = 286/317 (90%)
 Frame = +2

Query: 428  KAEFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKIL 607
            KAEFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKIL
Sbjct: 8    KAEFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKIL 67

Query: 608  QGGVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYV 787
            QGGVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYV
Sbjct: 68   QGGVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYV 127

Query: 788  HTKNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARY 967
            HTKNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARY
Sbjct: 128  HTKNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARY 187

Query: 968  ASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATXXXXXXXXXXXXMSTPVEV 1147
            ASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAAT            MSTPVEV
Sbjct: 188  ASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATKKQKYEKISEKKMSTPVEV 247

Query: 1148 LCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTMLXXXXXX 1327
            LCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTML      
Sbjct: 248  LCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTMLKQKAAQ 307

Query: 1328 XXXXXXXXXXXXXTPTG 1378
                         TPTG
Sbjct: 308  QAASSSGQGQQAQTPTG 324


>ref|NP_001020276.1| casein kinase I isoform alpha isoform 1 [Homo sapiens].
          Length = 365

 Score =  563 bits (1451), Expect = e-160
 Identities = 286/345 (82%), Positives = 286/345 (82%), Gaps = 28/345 (8%)
 Frame = +2

Query: 428  KAEFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKIL 607
            KAEFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKIL
Sbjct: 8    KAEFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKIL 67

Query: 608  QGGVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYV 787
            QGGVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYV
Sbjct: 68   QGGVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYV 127

Query: 788  HTKNFIHRDIKPDNFLMGIGRHCNK----------------------------LFLIDFG 883
            HTKNFIHRDIKPDNFLMGIGRHCNK                            LFLIDFG
Sbjct: 128  HTKNFIHRDIKPDNFLMGIGRHCNKCLESPVGKRKRSMTVSTSQDPSFSGLNQLFLIDFG 187

Query: 884  LAKKYRDNRTRQHIPYREDKNLTGTARYASINAHLGIEQSRRDDMESLGYVLMYFNRTSL 1063
            LAKKYRDNRTRQHIPYREDKNLTGTARYASINAHLGIEQSRRDDMESLGYVLMYFNRTSL
Sbjct: 188  LAKKYRDNRTRQHIPYREDKNLTGTARYASINAHLGIEQSRRDDMESLGYVLMYFNRTSL 247

Query: 1064 PWQGLKAATXXXXXXXXXXXXMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQ 1243
            PWQGLKAAT            MSTPVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQ
Sbjct: 248  PWQGLKAATKKQKYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQ 307

Query: 1244 LFRILFRTLNHQYDYTFDWTMLXXXXXXXXXXXXXXXXXXXTPTG 1378
            LFRILFRTLNHQYDYTFDWTML                   TPTG
Sbjct: 308  LFRILFRTLNHQYDYTFDWTMLKQKAAQQAASSSGQGQQAQTPTG 352


>ref|NP_660204.2| casein kinase I isoform alpha-like [Homo sapiens].
          Length = 337

 Score =  540 bits (1392), Expect = e-153
 Identities = 260/294 (88%), Positives = 268/294 (91%)
 Frame = +2

Query: 428  KAEFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKIL 607
            KAE +VGGKYKLVRKIGSGSFGD+YL I  TNGE+VAVKLESQK +HPQLLYESKLY IL
Sbjct: 8    KAELVVGGKYKLVRKIGSGSFGDVYLGITTTNGEDVAVKLESQKVKHPQLLYESKLYTIL 67

Query: 608  QGGVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYV 787
            QGGVGIPH+ WYGQEKD NVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYV
Sbjct: 68   QGGVGIPHMHWYGQEKDNNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYV 127

Query: 788  HTKNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARY 967
            HTKNF+HRDIKPDNFLMG GRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDK+L GT RY
Sbjct: 128  HTKNFLHRDIKPDNFLMGTGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKHLIGTVRY 187

Query: 968  ASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATXXXXXXXXXXXXMSTPVEV 1147
            ASINAHLGIEQSRRDDMESLGYV MYFNRTSLPWQGL+A T            MSTPVEV
Sbjct: 188  ASINAHLGIEQSRRDDMESLGYVFMYFNRTSLPWQGLRAMTKKQKYEKISEKKMSTPVEV 247

Query: 1148 LCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTML 1309
            LCKGFPAEFAMYLNYCRGLRFEE PDYMYLRQLFRILFRTLNHQYDYTFDWTML
Sbjct: 248  LCKGFPAEFAMYLNYCRGLRFEEVPDYMYLRQLFRILFRTLNHQYDYTFDWTML 301


>ref|NP_689407.1| casein kinase I isoform epsilon [Homo sapiens].
          Length = 416

 Score =  447 bits (1149), Expect = e-125
 Identities = 212/292 (72%), Positives = 242/292 (82%)
 Frame = +2

Query: 434  EFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKILQG 613
            E  VG KY+L RKIGSGSFGDIYL  NI +GEEVA+KLE  K +HPQL  ESK YK++QG
Sbjct: 2    ELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQG 61

Query: 614  GVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYVHT 793
            GVGIP I+W G E DYNV+VM+LLGPSLEDLFNFCSR+F++KTVL+LADQMISRIEY+H+
Sbjct: 62   GVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 121

Query: 794  KNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARYAS 973
            KNFIHRD+KPDNFLMG+G+  N +++IDFGLAKKYRD RT QHIPYRE+KNLTGTARYAS
Sbjct: 122  KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYAS 181

Query: 974  INAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATXXXXXXXXXXXXMSTPVEVLC 1153
            IN HLGIEQSRRDD+ESLGYVLMYFN  SLPWQGLKAAT            MSTP+EVLC
Sbjct: 182  INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLC 241

Query: 1154 KGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTML 1309
            KG+P+EF+ YLN+CR LRF++ PDY YLRQLFR LF      YDY FDW ML
Sbjct: 242  KGYPSEFSTYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNML 293


>ref|NP_001885.1| casein kinase I isoform epsilon [Homo sapiens].
          Length = 416

 Score =  447 bits (1149), Expect = e-125
 Identities = 212/292 (72%), Positives = 242/292 (82%)
 Frame = +2

Query: 434  EFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKILQG 613
            E  VG KY+L RKIGSGSFGDIYL  NI +GEEVA+KLE  K +HPQL  ESK YK++QG
Sbjct: 2    ELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQG 61

Query: 614  GVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYVHT 793
            GVGIP I+W G E DYNV+VM+LLGPSLEDLFNFCSR+F++KTVL+LADQMISRIEY+H+
Sbjct: 62   GVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 121

Query: 794  KNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARYAS 973
            KNFIHRD+KPDNFLMG+G+  N +++IDFGLAKKYRD RT QHIPYRE+KNLTGTARYAS
Sbjct: 122  KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYAS 181

Query: 974  INAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATXXXXXXXXXXXXMSTPVEVLC 1153
            IN HLGIEQSRRDD+ESLGYVLMYFN  SLPWQGLKAAT            MSTP+EVLC
Sbjct: 182  INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLC 241

Query: 1154 KGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTML 1309
            KG+P+EF+ YLN+CR LRF++ PDY YLRQLFR LF      YDY FDW ML
Sbjct: 242  KGYPSEFSTYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNML 293


>ref|NP_620693.1| casein kinase I isoform delta isoform 2 [Homo sapiens].
          Length = 409

 Score =  445 bits (1145), Expect = e-125
 Identities = 212/292 (72%), Positives = 242/292 (82%)
 Frame = +2

Query: 434  EFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKILQG 613
            E  VG +Y+L RKIGSGSFGDIYL  +I  GEEVA+KLE  K +HPQL  ESK+YK++QG
Sbjct: 2    ELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQG 61

Query: 614  GVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYVHT 793
            GVGIP IRW G E DYNV+VM+LLGPSLEDLFNFCSR+F++KTVL+LADQMISRIEY+H+
Sbjct: 62   GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 121

Query: 794  KNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARYAS 973
            KNFIHRD+KPDNFLMG+G+  N +++IDFGLAKKYRD RT QHIPYRE+KNLTGTARYAS
Sbjct: 122  KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYAS 181

Query: 974  INAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATXXXXXXXXXXXXMSTPVEVLC 1153
            IN HLGIEQSRRDD+ESLGYVLMYFN  SLPWQGLKAAT            MSTP+EVLC
Sbjct: 182  INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLC 241

Query: 1154 KGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTML 1309
            KG+P+EFA YLN+CR LRF++ PDY YLRQLFR LF      YDY FDW ML
Sbjct: 242  KGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNML 293


>ref|NP_001884.2| casein kinase I isoform delta isoform 1 [Homo sapiens].
          Length = 415

 Score =  445 bits (1145), Expect = e-125
 Identities = 212/292 (72%), Positives = 242/292 (82%)
 Frame = +2

Query: 434  EFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKILQG 613
            E  VG +Y+L RKIGSGSFGDIYL  +I  GEEVA+KLE  K +HPQL  ESK+YK++QG
Sbjct: 2    ELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQG 61

Query: 614  GVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYVHT 793
            GVGIP IRW G E DYNV+VM+LLGPSLEDLFNFCSR+F++KTVL+LADQMISRIEY+H+
Sbjct: 62   GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 121

Query: 794  KNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARYAS 973
            KNFIHRD+KPDNFLMG+G+  N +++IDFGLAKKYRD RT QHIPYRE+KNLTGTARYAS
Sbjct: 122  KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYAS 181

Query: 974  INAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATXXXXXXXXXXXXMSTPVEVLC 1153
            IN HLGIEQSRRDD+ESLGYVLMYFN  SLPWQGLKAAT            MSTP+EVLC
Sbjct: 182  INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLC 241

Query: 1154 KGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTML 1309
            KG+P+EFA YLN+CR LRF++ PDY YLRQLFR LF      YDY FDW ML
Sbjct: 242  KGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNML 293


>ref|NP_001038188.1| casein kinase I isoform gamma-3 isoform 4 [Homo sapiens].
          Length = 455

 Score =  312 bits (800), Expect = 7e-85
 Identities = 160/291 (54%), Positives = 205/291 (70%), Gaps = 4/291 (1%)
 Frame = +2

Query: 440  IVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKILQGGV 619
            +VG  +++ +KIG G+FG++ L  N+   E VA+KLE  K+R PQL  E + YK L  G 
Sbjct: 38   MVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSGD 97

Query: 620  GIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYVHTKN 799
            GIP + ++G    YN +V++LLGPSLEDLF+ C R F++KTVLM+A Q+ISR+EYVH+KN
Sbjct: 98   GIPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKN 157

Query: 800  FIHRDIKPDNFLMGIGRHCNK----LFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARY 967
             I+RD+KP+NFL  IGR  NK    + +IDFGLAK+Y D  T++HIPYRE K+LTGTARY
Sbjct: 158  LIYRDVKPENFL--IGRPGNKTQQVIHIIDFGLAKEYIDPETKKHIPYREHKSLTGTARY 215

Query: 968  ASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATXXXXXXXXXXXXMSTPVEV 1147
             SIN HLG EQSRRDD+E+LG++ MYF R SLPWQGLKA T             +TP+EV
Sbjct: 216  MSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEV 275

Query: 1148 LCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDW 1300
            LC+ FP E A YL Y R L F E PDY YLR+LF  LF    + +DY +DW
Sbjct: 276  LCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRKGYMFDYEYDW 325


>ref|NP_001038187.1| casein kinase I isoform gamma-3 isoform 3 [Homo sapiens].
          Length = 415

 Score =  312 bits (800), Expect = 7e-85
 Identities = 160/291 (54%), Positives = 205/291 (70%), Gaps = 4/291 (1%)
 Frame = +2

Query: 440  IVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKILQGGV 619
            +VG  +++ +KIG G+FG++ L  N+   E VA+KLE  K+R PQL  E + YK L  G 
Sbjct: 38   MVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSGD 97

Query: 620  GIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYVHTKN 799
            GIP + ++G    YN +V++LLGPSLEDLF+ C R F++KTVLM+A Q+ISR+EYVH+KN
Sbjct: 98   GIPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKN 157

Query: 800  FIHRDIKPDNFLMGIGRHCNK----LFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARY 967
             I+RD+KP+NFL  IGR  NK    + +IDFGLAK+Y D  T++HIPYRE K+LTGTARY
Sbjct: 158  LIYRDVKPENFL--IGRPGNKTQQVIHIIDFGLAKEYIDPETKKHIPYREHKSLTGTARY 215

Query: 968  ASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATXXXXXXXXXXXXMSTPVEV 1147
             SIN HLG EQSRRDD+E+LG++ MYF R SLPWQGLKA T             +TP+EV
Sbjct: 216  MSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEV 275

Query: 1148 LCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDW 1300
            LC+ FP E A YL Y R L F E PDY YLR+LF  LF    + +DY +DW
Sbjct: 276  LCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRKGYMFDYEYDW 325


>ref|NP_001026982.1| casein kinase I isoform gamma-3 isoform 2 [Homo sapiens].
          Length = 423

 Score =  312 bits (800), Expect = 7e-85
 Identities = 160/291 (54%), Positives = 205/291 (70%), Gaps = 4/291 (1%)
 Frame = +2

Query: 440  IVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKILQGGV 619
            +VG  +++ +KIG G+FG++ L  N+   E VA+KLE  K+R PQL  E + YK L  G 
Sbjct: 38   MVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSGD 97

Query: 620  GIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYVHTKN 799
            GIP + ++G    YN +V++LLGPSLEDLF+ C R F++KTVLM+A Q+ISR+EYVH+KN
Sbjct: 98   GIPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKN 157

Query: 800  FIHRDIKPDNFLMGIGRHCNK----LFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARY 967
             I+RD+KP+NFL  IGR  NK    + +IDFGLAK+Y D  T++HIPYRE K+LTGTARY
Sbjct: 158  LIYRDVKPENFL--IGRPGNKTQQVIHIIDFGLAKEYIDPETKKHIPYREHKSLTGTARY 215

Query: 968  ASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATXXXXXXXXXXXXMSTPVEV 1147
             SIN HLG EQSRRDD+E+LG++ MYF R SLPWQGLKA T             +TP+EV
Sbjct: 216  MSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEV 275

Query: 1148 LCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDW 1300
            LC+ FP E A YL Y R L F E PDY YLR+LF  LF    + +DY +DW
Sbjct: 276  LCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRKGYMFDYEYDW 325


  Database: RefSeq49_HP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,297,164
  Number of sequences in database:  32,964
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 79,206,055
Number of extensions: 1942469
Number of successful extensions: 7420
Number of sequences better than 1.0e-05: 280
Number of HSP's gapped: 6944
Number of HSP's successfully gapped: 280
Length of query: 760
Length of database: 18,297,164
Length adjustment: 110
Effective length of query: 650
Effective length of database: 14,671,124
Effective search space: 9536230600
Effective search space used: 9536230600
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-002609
         (2281 letters)

Database: RefSeq49_MP.fasta 
           30,036 sequences; 15,617,559 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_666199.1| casein kinase I isoform alpha [Mus musculus].        580   e-165
Alignment   gi|NP_038795.3| casein kinase I isoform epsilon [Mus musculus].      447   e-125
Alignment   gi|NP_620690.1| casein kinase I isoform delta isoform 1 [Mus mu...   445   e-125
Alignment   gi|NP_082150.1| casein kinase I isoform delta isoform 2 [Mus mu...   445   e-125
Alignment   gi|NP_690022.2| casein kinase I isoform gamma-3 [Mus musculus].      317   3e-86
Alignment   gi|NP_775277.2| casein kinase I isoform gamma-1 [Mus musculus].      311   1e-84
Alignment   gi|NP_001153063.1| casein kinase I isoform gamma-2 isoform 2 [M...   311   2e-84
Alignment   gi|NP_598763.1| casein kinase I isoform gamma-2 isoform 1 [Mus ...   297   3e-80
Alignment   gi|NP_001156336.1| tau-tubulin kinase 1 [Mus musculus].              165   2e-40
Alignment   gi|NP_001020028.1| tau-tubulin kinase 2 isoform 2 [Mus musculus].    161   2e-39

>ref|NP_666199.1| casein kinase I isoform alpha [Mus musculus].
          Length = 325

 Score =  580 bits (1496), Expect = e-165
 Identities = 287/318 (90%), Positives = 287/318 (90%)
 Frame = +2

Query: 428  KAEFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKIL 607
            KAEFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKIL
Sbjct: 8    KAEFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKIL 67

Query: 608  QGGVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYV 787
            QGGVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYV
Sbjct: 68   QGGVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYV 127

Query: 788  HTKNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARY 967
            HTKNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARY
Sbjct: 128  HTKNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARY 187

Query: 968  ASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATXXXXXXXXXXXXMSTPVEV 1147
            ASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAAT            MSTPVEV
Sbjct: 188  ASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATKKQKYEKISEKKMSTPVEV 247

Query: 1148 LCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTMLXXXXXX 1327
            LCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTML      
Sbjct: 248  LCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTMLKQKAAQ 307

Query: 1328 XXXXXXXXXXXXXTPTGF 1381
                         TPTGF
Sbjct: 308  QAASSSGQGQQAQTPTGF 325


>ref|NP_038795.3| casein kinase I isoform epsilon [Mus musculus].
          Length = 416

 Score =  447 bits (1149), Expect = e-125
 Identities = 212/292 (72%), Positives = 242/292 (82%)
 Frame = +2

Query: 434  EFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKILQG 613
            E  VG KY+L RKIGSGSFGDIYL  NI +GEEVA+KLE  K +HPQL  ESK YK++QG
Sbjct: 2    ELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQG 61

Query: 614  GVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYVHT 793
            GVGIP I+W G E DYNV+VM+LLGPSLEDLFNFCSR+F++KTVL+LADQMISRIEY+H+
Sbjct: 62   GVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 121

Query: 794  KNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARYAS 973
            KNFIHRD+KPDNFLMG+G+  N +++IDFGLAKKYRD RT QHIPYRE+KNLTGTARYAS
Sbjct: 122  KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYAS 181

Query: 974  INAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATXXXXXXXXXXXXMSTPVEVLC 1153
            IN HLGIEQSRRDD+ESLGYVLMYFN  SLPWQGLKAAT            MSTP+EVLC
Sbjct: 182  INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLC 241

Query: 1154 KGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTML 1309
            KG+P+EF+ YLN+CR LRF++ PDY YLRQLFR LF      YDY FDW ML
Sbjct: 242  KGYPSEFSTYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNML 293


>ref|NP_620690.1| casein kinase I isoform delta isoform 1 [Mus musculus].
          Length = 415

 Score =  445 bits (1145), Expect = e-125
 Identities = 212/292 (72%), Positives = 242/292 (82%)
 Frame = +2

Query: 434  EFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKILQG 613
            E  VG +Y+L RKIGSGSFGDIYL  +I  GEEVA+KLE  K +HPQL  ESK+YK++QG
Sbjct: 2    ELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQG 61

Query: 614  GVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYVHT 793
            GVGIP IRW G E DYNV+VM+LLGPSLEDLFNFCSR+F++KTVL+LADQMISRIEY+H+
Sbjct: 62   GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 121

Query: 794  KNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARYAS 973
            KNFIHRD+KPDNFLMG+G+  N +++IDFGLAKKYRD RT QHIPYRE+KNLTGTARYAS
Sbjct: 122  KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYAS 181

Query: 974  INAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATXXXXXXXXXXXXMSTPVEVLC 1153
            IN HLGIEQSRRDD+ESLGYVLMYFN  SLPWQGLKAAT            MSTP+EVLC
Sbjct: 182  INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLC 241

Query: 1154 KGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTML 1309
            KG+P+EFA YLN+CR LRF++ PDY YLRQLFR LF      YDY FDW ML
Sbjct: 242  KGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNML 293


>ref|NP_082150.1| casein kinase I isoform delta isoform 2 [Mus musculus].
          Length = 409

 Score =  445 bits (1145), Expect = e-125
 Identities = 212/292 (72%), Positives = 242/292 (82%)
 Frame = +2

Query: 434  EFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKILQG 613
            E  VG +Y+L RKIGSGSFGDIYL  +I  GEEVA+KLE  K +HPQL  ESK+YK++QG
Sbjct: 2    ELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQG 61

Query: 614  GVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYVHT 793
            GVGIP IRW G E DYNV+VM+LLGPSLEDLFNFCSR+F++KTVL+LADQMISRIEY+H+
Sbjct: 62   GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 121

Query: 794  KNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARYAS 973
            KNFIHRD+KPDNFLMG+G+  N +++IDFGLAKKYRD RT QHIPYRE+KNLTGTARYAS
Sbjct: 122  KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYAS 181

Query: 974  INAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATXXXXXXXXXXXXMSTPVEVLC 1153
            IN HLGIEQSRRDD+ESLGYVLMYFN  SLPWQGLKAAT            MSTP+EVLC
Sbjct: 182  INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLC 241

Query: 1154 KGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTML 1309
            KG+P+EFA YLN+CR LRF++ PDY YLRQLFR LF      YDY FDW ML
Sbjct: 242  KGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNML 293


>ref|NP_690022.2| casein kinase I isoform gamma-3 [Mus musculus].
          Length = 424

 Score =  317 bits (811), Expect = 3e-86
 Identities = 160/291 (54%), Positives = 205/291 (70%), Gaps = 4/291 (1%)
 Frame = +2

Query: 440  IVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKILQGGV 619
            +VG  +++ +KIG G+FG++ L  N+   E VA+KLE  K+R PQL  E + YK L  G 
Sbjct: 38   MVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSGD 97

Query: 620  GIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYVHTKN 799
            GIP + ++G    YN +V++LLGPSLEDLF+ C R F++KTVLM+A Q+ISR+EYVH+KN
Sbjct: 98   GIPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKN 157

Query: 800  FIHRDIKPDNFLMGIGRHCNK----LFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARY 967
             I+RD+KP+NFL  IGR  NK    + +IDFGLAK+Y D  T++HIPYRE K+LTGTARY
Sbjct: 158  LIYRDVKPENFL--IGRPGNKAQQVIHIIDFGLAKEYIDPETKKHIPYREHKSLTGTARY 215

Query: 968  ASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATXXXXXXXXXXXXMSTPVEV 1147
             SIN HLG EQSRRDD+E+LG++ MYF R SLPWQGLKA T             +TP+EV
Sbjct: 216  MSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEV 275

Query: 1148 LCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDW 1300
            LC+ FP E A YL Y R L F E PDY YLR+LF  LF    + +DY +DW
Sbjct: 276  LCENFPEEMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRKGYMFDYEYDW 326


>ref|NP_775277.2| casein kinase I isoform gamma-1 [Mus musculus].
          Length = 459

 Score =  311 bits (798), Expect = 1e-84
 Identities = 158/292 (54%), Positives = 203/292 (69%), Gaps = 5/292 (1%)
 Frame = +2

Query: 440  IVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKIL-QGG 616
            +VG  +++ +KIG G+FG++ L  N+   E VA+KLE  K+R PQL  E + YK L   G
Sbjct: 39   MVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPIKSRAPQLHLEYRFYKQLGSAG 98

Query: 617  VGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYVHTK 796
             G+P + ++G    YN +V++LLGPSLEDLF+ C R FT+KTVLM+A Q++SR+EYVH+K
Sbjct: 99   EGLPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFTLKTVLMIAIQLLSRMEYVHSK 158

Query: 797  NFIHRDIKPDNFLMGIGRHCNK----LFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTAR 964
            N I+RD+KP+NFL  IGR  NK    + +IDFGLAK+Y D  T++HIPYRE K+LTGTAR
Sbjct: 159  NLIYRDVKPENFL--IGRQGNKKEHVIHIIDFGLAKEYVDPETKKHIPYREHKSLTGTAR 216

Query: 965  YASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATXXXXXXXXXXXXMSTPVE 1144
            Y SIN HLG EQSRRDD+E+LG++ MYF R SLPWQGLKA T             +TP+E
Sbjct: 217  YMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRNTPIE 276

Query: 1145 VLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDW 1300
             LC+ FP E A YL Y R L F E PDY YLR LF  LF    + +DY +DW
Sbjct: 277  ALCENFPEEMATYLRYVRRLDFFEKPDYEYLRTLFTDLFERKGYTFDYAYDW 328


>ref|NP_001153063.1| casein kinase I isoform gamma-2 isoform 2 [Mus musculus].
          Length = 415

 Score =  311 bits (796), Expect = 2e-84
 Identities = 154/289 (53%), Positives = 203/289 (70%), Gaps = 2/289 (0%)
 Frame = +2

Query: 440  IVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKILQGGV 619
            +VG  +++ +KIG G+FG++ L  N+   E VA+KLE  K+R PQL  E + YK L    
Sbjct: 41   MVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPIKSRAPQLHLEYRFYKQLSTTE 100

Query: 620  GIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYVHTKN 799
            G+P + ++G    YN +V++LLGPSLEDLF+ C R FT+KTVLM+A Q+I+R+EYVHTK+
Sbjct: 101  GVPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFTLKTVLMIAIQLITRMEYVHTKS 160

Query: 800  FIHRDIKPDNFLMGI--GRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARYAS 973
             I+RD+KP+NFL+G    +  + + +IDFGLAK+Y D  T++HIPYRE K+LTGTARY S
Sbjct: 161  LIYRDVKPENFLVGRPGSKRQHSIHIIDFGLAKEYIDPETKKHIPYREHKSLTGTARYMS 220

Query: 974  INAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATXXXXXXXXXXXXMSTPVEVLC 1153
            IN HLG EQSRRDD+E+LG++ MYF R SLPWQGLKA T             +TP+EVLC
Sbjct: 221  INTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLC 280

Query: 1154 KGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDW 1300
            + FP E A YL Y R L F E PDY YLR+LF  LF    + +DY +DW
Sbjct: 281  ESFPEEMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRSGYVFDYEYDW 329


>ref|NP_598763.1| casein kinase I isoform gamma-2 isoform 1 [Mus musculus].
          Length = 442

 Score =  297 bits (760), Expect = 3e-80
 Identities = 154/316 (48%), Positives = 203/316 (64%), Gaps = 29/316 (9%)
 Frame = +2

Query: 440  IVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKILQG-- 613
            +VG  +++ +KIG G+FG++ L  N+   E VA+KLE  K+R PQL  E + YK L    
Sbjct: 41   MVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPIKSRAPQLHLEYRFYKQLSTTG 100

Query: 614  -------------------------GVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFC 718
                                       G+P + ++G    YN +V++LLGPSLEDLF+ C
Sbjct: 101  EADSGTGPALLGQQWLRTPSMDVSFAEGVPQVYYFGPCGKYNAMVLELLGPSLEDLFDLC 160

Query: 719  SRRFTMKTVLMLADQMISRIEYVHTKNFIHRDIKPDNFLMGI--GRHCNKLFLIDFGLAK 892
             R FT+KTVLM+A Q+I+R+EYVHTK+ I+RD+KP+NFL+G    +  + + +IDFGLAK
Sbjct: 161  DRTFTLKTVLMIAIQLITRMEYVHTKSLIYRDVKPENFLVGRPGSKRQHSIHIIDFGLAK 220

Query: 893  KYRDNRTRQHIPYREDKNLTGTARYASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQ 1072
            +Y D  T++HIPYRE K+LTGTARY SIN HLG EQSRRDD+E+LG++ MYF R SLPWQ
Sbjct: 221  EYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQ 280

Query: 1073 GLKAATXXXXXXXXXXXXMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFR 1252
            GLKA T             +TP+EVLC+ FP E A YL Y R L F E PDY YLR+LF 
Sbjct: 281  GLKADTLKERYQKIGDTKRATPIEVLCESFPEEMATYLRYVRRLDFFEKPDYDYLRKLFT 340

Query: 1253 ILFRTLNHQYDYTFDW 1300
             LF    + +DY +DW
Sbjct: 341  DLFDRSGYVFDYEYDW 356


>ref|NP_001156336.1| tau-tubulin kinase 1 [Mus musculus].
          Length = 1308

 Score =  165 bits (417), Expect = 2e-40
 Identities = 102/292 (34%), Positives = 151/292 (51%), Gaps = 2/292 (0%)
 Frame = +2

Query: 431  AEFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKILQ 610
            A ++V  ++K+++KIG G FG+IY A+++   E VA+K+ES +     L  E  + K LQ
Sbjct: 26   ANYVVKDRWKVLKKIGGGGFGEIYEAMDLLTRENVALKVESAQQPKQVLKMEVAVLKKLQ 85

Query: 611  GGVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSR-RFTMKTVLMLADQMISRIEYV 787
            G   +      G+ + +N +VM L G +L DL     R  FT+ T L L  Q++  IE +
Sbjct: 86   GKDHVCRFIGCGRNEKFNYVVMQLQGRNLADLRRSQPRGTFTLSTTLRLGKQILESIEAI 145

Query: 788  HTKNFIHRDIKPDNFLMG-IGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTAR 964
            H+  F+HRDIKP NF MG +     K +++DFGLA++Y  N T    P R      GT R
Sbjct: 146  HSVGFLHRDIKPSNFAMGRLPSTYRKCYMLDFGLARQY-TNTTGDVRPPRNVAGFRGTVR 204

Query: 965  YASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATXXXXXXXXXXXXMSTPVE 1144
            YAS+NAH   E  R DD+ SL Y+L+ F    LPW+ +K               M     
Sbjct: 205  YASVNAHKNREMGRHDDLWSLFYMLVEFAVGQLPWRKIKDKEQVGMIKEKYEHRM----- 259

Query: 1145 VLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDW 1300
             L K  P+EF ++L++   L +   PDY  +  +F    +      +  FDW
Sbjct: 260  -LLKHMPSEFHLFLDHIASLDYFTKPDYQLIMSVFENSMKERGIAENEAFDW 310


>ref|NP_001020028.1| tau-tubulin kinase 2 isoform 2 [Mus musculus].
          Length = 1243

 Score =  161 bits (408), Expect = 2e-39
 Identities = 104/289 (35%), Positives = 147/289 (50%), Gaps = 2/289 (0%)
 Frame = +2

Query: 440  IVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKILQGGV 619
            +V  ++K++RKIG G FG+IY A+++   E VA+K+ES +     L  E  + K LQG  
Sbjct: 16   LVKERWKVLRKIGGGGFGEIYDALDMLTRENVALKVESAQQPKQVLKMEVAVLKKLQGKD 75

Query: 620  GIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSR-RFTMKTVLMLADQMISRIEYVHTK 796
             +      G+   +N +VM L G +L DL    SR  FT+ T L L  Q++  IE +H+ 
Sbjct: 76   HVCRFIGCGRNDRFNYVVMQLQGRNLADLRRSQSRGTFTISTTLRLGKQILESIESIHSV 135

Query: 797  NFIHRDIKPDNFLMG-IGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARYAS 973
             F+HRDIKP NF MG     C K F++DFGLA+++  N      P R      GT RYAS
Sbjct: 136  GFLHRDIKPSNFAMGRFPSTCRKCFMLDFGLARQF-TNSCGDVRPPRAVAGFRGTVRYAS 194

Query: 974  INAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATXXXXXXXXXXXXMSTPVEVLC 1153
            INAH   E  R DD+ SL Y+L+ F    LPW+ +K                     ++ 
Sbjct: 195  INAHRNREMGRHDDLWSLFYMLVEFVVGQLPWRKIKDKEQVGSIKERYDH------RLML 248

Query: 1154 KGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDW 1300
            K  P EF+ +L++   L +   PDY  L  +F    +T        FDW
Sbjct: 249  KHLPPEFSTFLDHISSLDYFTKPDYQLLTSVFDNSIKTFGVIESDPFDW 297


  Database: RefSeq49_MP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 15,617,559
  Number of sequences in database:  30,036
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 67,582,247
Number of extensions: 1652076
Number of successful extensions: 6016
Number of sequences better than 1.0e-05: 230
Number of HSP's gapped: 5625
Number of HSP's successfully gapped: 230
Length of query: 760
Length of database: 15,617,559
Length adjustment: 109
Effective length of query: 651
Effective length of database: 12,343,635
Effective search space: 8035706385
Effective search space used: 8035706385
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-002609
         (2281 letters)

Database: RefSeq49_SP.fasta 
           24,897 sequences; 11,343,932 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_003124136.1| PREDICTED: casein kinase I isoform alpha iso...   578   e-165
Alignment   gi|XP_003354399.1| PREDICTED: casein kinase I isoform alpha [Su...   563   e-160
Alignment   gi|XP_003355386.1| PREDICTED: casein kinase I isoform epsilon i...   447   e-125
Alignment   gi|XP_003126072.1| PREDICTED: casein kinase I isoform epsilon i...   447   e-125
Alignment   gi|XP_003357975.1| PREDICTED: hypothetical protein LOC100625051...   358   9e-99
Alignment   gi|XP_003123049.1| PREDICTED: casein kinase I isoform gamma-2 [...   286   3e-77
Alignment   gi|XP_001927058.3| PREDICTED: casein kinase I isoform gamma-1-l...   269   6e-72
Alignment   gi|XP_003123926.2| PREDICTED: casein kinase I isoform gamma-3-l...   256   4e-68
Alignment   gi|XP_001929339.2| PREDICTED: tau-tubulin kinase 1 [Sus scrofa].     165   1e-40
Alignment   gi|XP_003353431.1| PREDICTED: tau-tubulin kinase 2 [Sus scrofa].     160   2e-39

>ref|XP_003124136.1| PREDICTED: casein kinase I isoform alpha isoform 1 [Sus scrofa].
          Length = 337

 Score =  578 bits (1490), Expect = e-165
 Identities = 286/317 (90%), Positives = 286/317 (90%)
 Frame = +2

Query: 428  KAEFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKIL 607
            KAEFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKIL
Sbjct: 8    KAEFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKIL 67

Query: 608  QGGVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYV 787
            QGGVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYV
Sbjct: 68   QGGVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYV 127

Query: 788  HTKNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARY 967
            HTKNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARY
Sbjct: 128  HTKNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARY 187

Query: 968  ASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATXXXXXXXXXXXXMSTPVEV 1147
            ASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAAT            MSTPVEV
Sbjct: 188  ASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATKKQKYEKISEKKMSTPVEV 247

Query: 1148 LCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTMLXXXXXX 1327
            LCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTML      
Sbjct: 248  LCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTMLKQKAAQ 307

Query: 1328 XXXXXXXXXXXXXTPTG 1378
                         TPTG
Sbjct: 308  QAASSSGQGQQAQTPTG 324


>ref|XP_003354399.1| PREDICTED: casein kinase I isoform alpha [Sus scrofa].
          Length = 364

 Score =  563 bits (1451), Expect = e-160
 Identities = 286/345 (82%), Positives = 286/345 (82%), Gaps = 28/345 (8%)
 Frame = +2

Query: 428  KAEFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKIL 607
            KAEFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKIL
Sbjct: 8    KAEFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKIL 67

Query: 608  QGGVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYV 787
            QGGVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYV
Sbjct: 68   QGGVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYV 127

Query: 788  HTKNFIHRDIKPDNFLMGIGRHCNK----------------------------LFLIDFG 883
            HTKNFIHRDIKPDNFLMGIGRHCNK                            LFLIDFG
Sbjct: 128  HTKNFIHRDIKPDNFLMGIGRHCNKCLESPVGKRKRSMTVSTSQDPSFSGLNQLFLIDFG 187

Query: 884  LAKKYRDNRTRQHIPYREDKNLTGTARYASINAHLGIEQSRRDDMESLGYVLMYFNRTSL 1063
            LAKKYRDNRTRQHIPYREDKNLTGTARYASINAHLGIEQSRRDDMESLGYVLMYFNRTSL
Sbjct: 188  LAKKYRDNRTRQHIPYREDKNLTGTARYASINAHLGIEQSRRDDMESLGYVLMYFNRTSL 247

Query: 1064 PWQGLKAATXXXXXXXXXXXXMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQ 1243
            PWQGLKAAT            MSTPVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQ
Sbjct: 248  PWQGLKAATKKQKYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQ 307

Query: 1244 LFRILFRTLNHQYDYTFDWTMLXXXXXXXXXXXXXXXXXXXTPTG 1378
            LFRILFRTLNHQYDYTFDWTML                   TPTG
Sbjct: 308  LFRILFRTLNHQYDYTFDWTMLKQKAAQQAASSSGQGQQAQTPTG 352


>ref|XP_003355386.1| PREDICTED: casein kinase I isoform epsilon isoform 2 [Sus scrofa].
          Length = 416

 Score =  447 bits (1149), Expect = e-125
 Identities = 212/292 (72%), Positives = 242/292 (82%)
 Frame = +2

Query: 434  EFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKILQG 613
            E  VG KY+L RKIGSGSFGDIYL  NI +GEEVA+KLE  K +HPQL  ESK YK++QG
Sbjct: 2    ELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQG 61

Query: 614  GVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYVHT 793
            GVGIP I+W G E DYNV+VM+LLGPSLEDLFNFCSR+F++KTVL+LADQMISRIEY+H+
Sbjct: 62   GVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 121

Query: 794  KNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARYAS 973
            KNFIHRD+KPDNFLMG+G+  N +++IDFGLAKKYRD RT QHIPYRE+KNLTGTARYAS
Sbjct: 122  KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYAS 181

Query: 974  INAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATXXXXXXXXXXXXMSTPVEVLC 1153
            IN HLGIEQSRRDD+ESLGYVLMYFN  SLPWQGLKAAT            MSTP+EVLC
Sbjct: 182  INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLC 241

Query: 1154 KGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTML 1309
            KG+P+EF+ YLN+CR LRF++ PDY YLRQLFR LF      YDY FDW ML
Sbjct: 242  KGYPSEFSTYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNML 293


>ref|XP_003126072.1| PREDICTED: casein kinase I isoform epsilon isoform 1 [Sus scrofa].
          Length = 416

 Score =  447 bits (1149), Expect = e-125
 Identities = 212/292 (72%), Positives = 242/292 (82%)
 Frame = +2

Query: 434  EFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKILQG 613
            E  VG KY+L RKIGSGSFGDIYL  NI +GEEVA+KLE  K +HPQL  ESK YK++QG
Sbjct: 2    ELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQG 61

Query: 614  GVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYVHT 793
            GVGIP I+W G E DYNV+VM+LLGPSLEDLFNFCSR+F++KTVL+LADQMISRIEY+H+
Sbjct: 62   GVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 121

Query: 794  KNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARYAS 973
            KNFIHRD+KPDNFLMG+G+  N +++IDFGLAKKYRD RT QHIPYRE+KNLTGTARYAS
Sbjct: 122  KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYAS 181

Query: 974  INAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATXXXXXXXXXXXXMSTPVEVLC 1153
            IN HLGIEQSRRDD+ESLGYVLMYFN  SLPWQGLKAAT            MSTP+EVLC
Sbjct: 182  INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLC 241

Query: 1154 KGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTML 1309
            KG+P+EF+ YLN+CR LRF++ PDY YLRQLFR LF      YDY FDW ML
Sbjct: 242  KGYPSEFSTYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNML 293


>ref|XP_003357975.1| PREDICTED: hypothetical protein LOC100625051 [Sus scrofa].
          Length = 620

 Score =  358 bits (918), Expect = 9e-99
 Identities = 171/231 (74%), Positives = 192/231 (83%)
 Frame = +2

Query: 617  VGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYVHTK 796
            VGIP IRW G E DYNV+VM+LLGPSLEDLFNFCSR+F++KTVL+LADQMISRIEY+H+K
Sbjct: 36   VGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK 95

Query: 797  NFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARYASI 976
            NFIHRD+KPDNFLMG+G+  N +++IDFGLAKKYRD RT QHIPYRE+KNLTGTARYASI
Sbjct: 96   NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASI 155

Query: 977  NAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATXXXXXXXXXXXXMSTPVEVLCK 1156
            N HLGIEQSRRDD+ESLGYVLMYFN  SLPWQGLKAAT            MSTP+EVLCK
Sbjct: 156  NTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKEMSTPIEVLCK 215

Query: 1157 GFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTML 1309
              P+EFA YLN+CR LRF++ PDY YLRQLFR LF      YDY FDW ML
Sbjct: 216  -LPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNML 265


>ref|XP_003123049.1| PREDICTED: casein kinase I isoform gamma-2 [Sus scrofa].
          Length = 409

 Score =  286 bits (733), Expect = 3e-77
 Identities = 145/289 (50%), Positives = 194/289 (67%), Gaps = 2/289 (0%)
 Frame = +2

Query: 440  IVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKILQGGV 619
            +VG  +++ +KIG G+FG++ L  N+   E VA+KLE  K+R PQL  E + YK L    
Sbjct: 40   MVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPIKSRAPQLHLEYRFYKQLSAAE 99

Query: 620  GIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYVHTKN 799
            G+P + ++G    YN +V++LLGPSLEDLF+ C R FT+KTVLM+A Q+I+R+EYVHTK+
Sbjct: 100  GVPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFTLKTVLMIAIQLITRMEYVHTKS 159

Query: 800  FIHRDIKPDNFLMGI--GRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARYAS 973
             I+RD+KP+NFL+G    +  + + +IDFGLAK+Y D  T++HIPYRE K+LTGTARY S
Sbjct: 160  LIYRDVKPENFLVGRPGTKRQHAIHIIDFGLAKEYIDPETKKHIPYREHKSLTGTARYMS 219

Query: 974  INAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATXXXXXXXXXXXXMSTPVEVLC 1153
            IN HLG     + ++ + G + MYF R SLPWQGLKA T             +TP+EVLC
Sbjct: 220  INTHLG-----KGELHAXGPMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLC 274

Query: 1154 KGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDW 1300
            + FP E A YL Y R L F E PDY YLR+LF  LF      +DY +DW
Sbjct: 275  ESFPEEMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRSGFVFDYEYDW 323


>ref|XP_001927058.3| PREDICTED: casein kinase I isoform gamma-1-like [Sus scrofa].
          Length = 494

 Score =  269 bits (687), Expect = 6e-72
 Identities = 132/231 (57%), Positives = 165/231 (71%), Gaps = 4/231 (1%)
 Frame = +2

Query: 620  GIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYVHTKN 799
            G+P + ++G    YN +V++LLGPSLEDLF+ C R FT+KTVLM+A Q++SR+EYVH+KN
Sbjct: 128  GLPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFTLKTVLMIAIQLLSRMEYVHSKN 187

Query: 800  FIHRDIKPDNFLMGIGRHCNK----LFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARY 967
             I+RD+KP+NFL  IGR  NK    + +IDFGLAK+Y D  T++HIPYRE K+LTGTARY
Sbjct: 188  LIYRDVKPENFL--IGRQGNKKEHVIHIIDFGLAKEYIDPETKKHIPYREHKSLTGTARY 245

Query: 968  ASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATXXXXXXXXXXXXMSTPVEV 1147
             SIN HLG EQSRRDD+E+LG++ MYF R SLPWQGLKA T             +TP+E 
Sbjct: 246  MSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRNTPIEA 305

Query: 1148 LCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDW 1300
            LC+ FP E A YL Y R L F E PDY YLR LF  LF    + +DY +DW
Sbjct: 306  LCENFPEEMATYLRYVRRLDFFEKPDYEYLRTLFTDLFERKGYAFDYAYDW 356


>ref|XP_003123926.2| PREDICTED: casein kinase I isoform gamma-3-like [Sus scrofa].
          Length = 311

 Score =  256 bits (654), Expect = 4e-68
 Identities = 128/215 (59%), Positives = 158/215 (73%), Gaps = 4/215 (1%)
 Frame = +2

Query: 668  LVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYVHTKNFIHRDIKPDNFLMGIG 847
            +V++LLGPSLEDLF+ C R F++KTVLM+A Q+ISR+EYVH+KN I+RD+KP+NFL  IG
Sbjct: 1    MVLELLGPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFL--IG 58

Query: 848  RHCNK----LFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARYASINAHLGIEQSRRDD 1015
            R  NK    + +IDFGLAK+Y D  T++HIPYRE K+LTGTARY SIN HLG EQSRRDD
Sbjct: 59   RPGNKTQQVIHIIDFGLAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDD 118

Query: 1016 MESLGYVLMYFNRTSLPWQGLKAATXXXXXXXXXXXXMSTPVEVLCKGFPAEFAMYLNYC 1195
            +E+LG++ MYF R SLPWQGLKA T             +TP+EVLC+ FP E A YL Y 
Sbjct: 119  LEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLCENFPEEMATYLRYV 178

Query: 1196 RGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDW 1300
            R L F E PDY YLR+LF  LF    + +DY +DW
Sbjct: 179  RRLDFFEKPDYDYLRKLFTDLFDRKGYMFDYEYDW 213


>ref|XP_001929339.2| PREDICTED: tau-tubulin kinase 1 [Sus scrofa].
          Length = 1305

 Score =  165 bits (417), Expect = 1e-40
 Identities = 102/292 (34%), Positives = 151/292 (51%), Gaps = 2/292 (0%)
 Frame = +2

Query: 431  AEFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKILQ 610
            A ++V  ++K+++KIG G FG+IY A+++   E VA+K+ES +     L  E  + K LQ
Sbjct: 26   ANYVVKDRWKVLKKIGGGGFGEIYEAMDLLTRENVALKVESAQQPKQVLKMEVAVLKKLQ 85

Query: 611  GGVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSR-RFTMKTVLMLADQMISRIEYV 787
            G   +      G+ + +N +VM L G +L DL     R  FT+ T L L  Q++  IE +
Sbjct: 86   GKDHVCRFIGCGRNEKFNYVVMQLQGRNLADLRRSQPRGTFTLSTTLRLGKQILESIEAI 145

Query: 788  HTKNFIHRDIKPDNFLMG-IGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTAR 964
            H+  F+HRDIKP NF MG +     K +++DFGLA++Y  N T    P R      GT R
Sbjct: 146  HSVGFLHRDIKPSNFAMGRLPSTYRKCYMLDFGLARQY-TNTTGDVRPPRNVAGFRGTVR 204

Query: 965  YASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATXXXXXXXXXXXXMSTPVE 1144
            YAS+NAH   E  R DD+ SL Y+L+ F    LPW+ +K               M     
Sbjct: 205  YASVNAHKNREMGRHDDLWSLFYMLVEFAVGQLPWRKIKDKEQVGMIKEKYEHRM----- 259

Query: 1145 VLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDW 1300
             L K  P+EF ++L++   L +   PDY  +  +F    +      +  FDW
Sbjct: 260  -LLKHMPSEFHLFLDHIASLDYFTKPDYQLIMSVFENSMKERGIAENEAFDW 310


>ref|XP_003353431.1| PREDICTED: tau-tubulin kinase 2 [Sus scrofa].
          Length = 1243

 Score =  160 bits (406), Expect = 2e-39
 Identities = 103/289 (35%), Positives = 148/289 (51%), Gaps = 2/289 (0%)
 Frame = +2

Query: 440  IVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKILQGGV 619
            +V  ++K++RKIG G FG+IY A+++   E VA+K+ES +     L  E  + K LQG  
Sbjct: 16   LVKERWKVLRKIGGGGFGEIYDALDMLTRENVALKVESAQQPKQVLKMEVAVLKKLQGKD 75

Query: 620  GIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSR-RFTMKTVLMLADQMISRIEYVHTK 796
             +      G+   +N +VM L G +L DL    SR  FT+ T L L  Q++  IE +H+ 
Sbjct: 76   HVCRFIGCGRNDRFNYVVMQLQGRNLADLRRSQSRGTFTISTTLRLGRQILESIESIHSV 135

Query: 797  NFIHRDIKPDNFLMG-IGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARYAS 973
             F+HRDIKP NF MG     C K +++DFGLA+++  N      P R      GT RYAS
Sbjct: 136  GFLHRDIKPSNFAMGRFPSTCRKCYMLDFGLARQF-TNSCGDVRPPRAVAGFRGTVRYAS 194

Query: 974  INAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATXXXXXXXXXXXXMSTPVEVLC 1153
            INAH   E  R DD+ SL Y+L+ F    LPW+ +K                     ++ 
Sbjct: 195  INAHRNREMGRHDDLWSLFYMLVEFVVGQLPWRKIKDKEQVGSIKERYDH------RLML 248

Query: 1154 KGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDW 1300
            K  P EF+++L++   L +   PDY  L  +F    +T        FDW
Sbjct: 249  KHLPPEFSIFLDHISSLDYFTKPDYQLLTSVFDNSIKTFGVIESDPFDW 297


  Database: RefSeq49_SP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 11,343,932
  Number of sequences in database:  24,897
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 49,695,025
Number of extensions: 1227206
Number of successful extensions: 4773
Number of sequences better than 1.0e-05: 123
Number of HSP's gapped: 4558
Number of HSP's successfully gapped: 123
Length of query: 760
Length of database: 11,343,932
Length adjustment: 107
Effective length of query: 653
Effective length of database: 8,679,953
Effective search space: 5668009309
Effective search space used: 5668009309
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-002609
         (2281 letters)

Database: Sscrofa_10.2.fasta 
           4582 sequences; 2,808,509,378 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Sscrofa_Chr17                                                        1776   0.0  
Sscrofa_Chr02                                                        1483   0.0  
Sscrofa_Chr01                                                          88   2e-14
Sscrofa_Chr09                                                          86   1e-13

>Sscrofa_Chr17 
||          Length = 69701581

 Score = 1776 bits (896), Expect = 0.0
 Identities = 1235/1346 (91%), Gaps = 17/1346 (1%)
 Strand = Plus / Plus

                                                                          
Query: 800    tttatacacagagacattaaaccagataacttcctaatgggtattgggcgtcactgtaat 859
              |||||||| || ||||||||||| |||||||||||||||||| |||||| ||||||||||
Sbjct: 262444 tttatacatagggacattaaacctgataacttcctaatgggtgttgggcttcactgtaat 262503

                                                                          
Query: 860    aagttattccttattgattttggtttggccaaaaagtacagagacaacaggacaaggcaa 919
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262504 aagttattccttattgattttggtttggccaaaaagtacagagacaacaggacaaggcaa 262563

                                                                          
Query: 920    cacataccatacagagaagataaaaatctcactggcactgcccgatacgctagcatcaat 979
              ||||||||||||| |||||| |||||||||||||||||||||| | | ||||||||||||
Sbjct: 262564 cacataccatacacagaagacaaaaatctcactggcactgcccaacatgctagcatcaat 262623

                                                                          
Query: 980    gcacatcttggtattgaacagagtcgccgagatgacatggaatcattaggatatgttttg 1039
              |||||||||| || ||||||||||| |||||||||||||||| |||| ||||  |||| |
Sbjct: 262624 gcacatcttgctactgaacagagtcaccgagatgacatggaaccattgggat--gtttcg 262681

                                                                          
Query: 1040   atgtattttaatagaaccagtctgccatggcaaggactcaaggctgcaacaaagaagcaa 1099
              ||||||||| |  ||||||||||||||| ||||||||| |||||||| ||||||||||||
Sbjct: 262682 atgtattttcacggaaccagtctgccattgcaaggactaaaggctgcgacaaagaagcaa 262741

                                                                          
Query: 1100   aaatatgaaaaaattagcgaaaagaagatgtccacacctgtggaagttttgtgtaagggg 1159
              |||||||||||||||||| ||| ||||||||||||| |||| || ||||| |||||||||
Sbjct: 262742 aaatatgaaaaaattagcaaaatgaagatgtccacatctgttgaggttttatgtaagggg 262801

                                                                          
Query: 1160   tttcctgcagaatttgccatgtacttaaactattgtcgtgggctgcgctttgaggaagcc 1219
              ||||||||||||||||||||||||||      |||| |||| ||||||||||||||||||
Sbjct: 262802 tttcctgcagaatttgccatgtactt------ttgtggtggactgcgctttgaggaagcc 262855

                                                                          
Query: 1220   ccggattacatgtacctgagacagctattccgcattcttttcaggaccctgaatcaccaa 1279
              || ||||||||||||||||| ||||| |||||||||||| ||||||||||||| ||||||
Sbjct: 262856 ccagattacatgtacctgaggcagctcttccgcattcttgtcaggaccctgaaccaccaa 262915

                                                                          
Query: 1280   tatgactacacatttgactggacaatgttaaagcagaaagcagcacagcaagcagcctct 1339
              | ||||||||||||||| ||| ||||||||||||||||||||||||||||  ||||||||
Sbjct: 262916 tgtgactacacatttgattgggcaatgttaaagcagaaagcagcacagcagacagcctct 262975

                                                                          
Query: 1340   tcaagtgggcagggtcagcaggcccaaacccccacaggtttctaagcatgaatcgaggaa 1399
              ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 262976 tcaagtgcgcagggtcagcaggcccaaacccccacaggtttctaagcatgaattgaggaa 263035

                                                                          
Query: 1400   cagaagcagcagagcagatgatcggagcagcatttgtttctccccaaatctagacatttt 1459
              |||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||
Sbjct: 263036 cagaagaagcagagcagatgatcggagcagcatttgcttctccccaaatctagaaatttt 263095

                                                                          
Query: 1460   agttcatatgtacactagccagtggctgtggacaaccatttccttggtgtaaagaacttc 1519
              ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||
Sbjct: 263096 agttcatatgtacactagccagtggttgtggacaaccatttacttggtgtaaagaacttc 263155

                                                                          
Query: 1520   atttcggtataaactggctctgggcagcactggcgatactgcgtcccgagttgtagccgc 1579
              ||||| | ||||||||| ||||||||||||||| ||| |||| ||| |||||||||| ||
Sbjct: 263156 atttcaggataaactgggtctgggcagcactggtgatgctgcatcctgagttgtagctgc 263215

                                                                          
Query: 1580   tgtaattgtgaatattaactgagatagtgagacatggtgtccagttttctattgcatttt 1639
              |||| |||||||||| |||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 263216 tgtagttgtgaatatcaactgagatagtgaaacatggtgtccagttttctattgcatttt 263275

                                                                          
Query: 1640   ttcaagtggaaaagttaactgagtggttgacacacacaaattggtggacagattgtgcat 1699
              |||||||||||||||||||| ||||||||||||||||||||||||||||| | |||||||
Sbjct: 263276 ttcaagtggaaaagttaactaagtggttgacacacacaaattggtggacaaactgtgcat 263335

                                                                          
Query: 1700   atgccaattgttttgttaaaaccttttcttttgaactatactgctttgagatctcacttc 1759
              ||||||||| ||||||||||| ||||| |||||||| ||||| ||||||||||||| |||
Sbjct: 263336 atgccaatt-ttttgttaaaaacttttattttgaacgatactactttgagatctcatttc 263394

                                                                          
Query: 1760   agaagaacggcatgaacagtcttcagccgcagttgtgatggttgtaaatgctcgcagctg 1819
              |||||||| ||||||||||||||||| | |||||||||||||||||||||||| |  |||
Sbjct: 263395 agaagaacagcatgaacagtcttcaggcacagttgtgatggttgtaaatgctcactactg 263454

                                                                          
Query: 1820   tgcgttcttagggtttcttcatccctggggtttgcaagttgttcacttaaaacattctta 1879
              ||| ||||||||| ||||||||||||||||| ||||||||||||||||||||||||| ||
Sbjct: 263455 tgcattcttagggcttcttcatccctggggtgtgcaagttgttcacttaaaacattccta 263514

                                                                          
Query: 1880   acatggttggcttcttgtgtgcaagccagctgatatggtagcaaccaaagattccagtgt 1939
              | |||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 263515 aaatggttggcttcttgtttgcaagccagctgatatggtagcaaccaaaggttccaatgt 263574

                                                                          
Query: 1940   ttgagcatatgaaagactctgcctgcttacctgtgctagaaataacagcatctaaagtga 1999
              ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263575 ttgagcatatgaaaga--ctgcctgcttacctgtgctagaaataacagcatctaaagtga 263632

                                                                          
Query: 2000   agacttaagaaaaacttagtgactactagattatccgtaggactctgcattaactctata 2059
              |||||||| ||||| ||||||||||||||||||||| |||||| ||||||||||||||||
Sbjct: 263633 agacttaa-aaaaaattagtgactactagattatccataggaccctgcattaactctata 263691

                                                                          
Query: 2060   atgttcttggtat-----tnnnnnnngcatatttgtcacagaaatttagttaacatcttt 2114
              | |||||||||||     |       ||||||||||||||||||||||||||||||||| 
Sbjct: 263692 acgttcttggtatttaaataaaaaaagcatatttgtcacagaaatttagttaacatctta 263751

                                        
Query: 2115   acactgaacatgtgtgtatgttgctt 2140
              | ||||||||||| ||||||||||||
Sbjct: 263752 aaactgaacatgtatgtatgttgctt 263777


>Sscrofa_Chr02 
||          Length = 162569375

 Score = 1483 bits (748), Expect = 0.0
 Identities = 788/806 (97%)
 Strand = Plus / Minus

                                                                             
Query: 1375      aggtttctaagcatgaatcgaggaacagaagcagcagagcagatgatcggagcagcattt 1434
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157381250 aggtttctaagcatgaatcgaggaacagaagcagcagagcagatgatcggagcagcattt 157381191

                                                                             
Query: 1435      gtttctccccaaatctagacattttagttcatatgtacactagccagtggctgtggacaa 1494
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157381190 gtttctccccaaatctagacattttagttcatatgtacactagccagtggctgtggacaa 157381131

                                                                             
Query: 1495      ccatttccttggtgtaaagaacttcatttcggtataaactggctctgggcagcactggcg 1554
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157381130 ccatttccttggtgtaaagaacttcatttcggtataaactggctctgggcagcactggcg 157381071

                                                                             
Query: 1555      atactgcgtcccgagttgtagccgctgtaattgtgaatattaactgagatagtgagacat 1614
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157381070 atactgcgtcccgagttgtagccgctgtaattgtgaatattaactgagatagtgagacat 157381011

                                                                             
Query: 1615      ggtgtccagttttctattgcattttttcaagtggaaaagttaactgagtggttgacacac 1674
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157381010 ggtgtccagttttctattgcattttttcaagtggaaaagttaactgagtggttgacacac 157380951

                                                                             
Query: 1675      acaaattggtggacagattgtgcatatgccaattgttttgttaaaaccttttcttttgaa 1734
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157380950 acaaattggtggacagattgtgcatatgccaattgttttgttaaaaccttttcttttgaa 157380891

                                                                             
Query: 1735      ctatactgctttgagatctcacttcagaagaacggcatgaacagtcttcagccgcagttg 1794
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157380890 ctatactgctttgagatctcacttcagaagaacggcatgaacagtcttcagccgcagttg 157380831

                                                                             
Query: 1795      tgatggttgtaaatgctcgcagctgtgcgttcttagggtttcttcatccctggggtttgc 1854
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157380830 tgatggttgtaaatgctcgcagctgtgcgttcttagggtttcttcatccctggggtttgc 157380771

                                                                             
Query: 1855      aagttgttcacttaaaacattcttaacatggttggcttcttgtgtgcaagccagctgata 1914
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157380770 aagttgttcacttaaaacattcttaacatggttggcttcttgtgtgcaagccagctgata 157380711

                                                                             
Query: 1915      tggtagcaaccaaagattccagtgtttgagcatatgaaagactctgcctgcttacctgtg 1974
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157380710 tggtagcaaccaaagattccagtgtttgagcatatgaaagactctgcctgcttacctgtg 157380651

                                                                             
Query: 1975      ctagaaataacagcatctaaagtgaagacttaagaaaaacttagtgactactagattatc 2034
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157380650 ctagaaataacagcatctaaagtgaagacttaagaaaaacttagtgactactagattatc 157380591

                                                                             
Query: 2035      cgtaggactctgcattaactctataatgttcttggtattnnnnnnngcatatttgtcaca 2094
                 |||||||||||||||||||||||||||||||||||||||       ||||||||||||||
Sbjct: 157380590 cgtaggactctgcattaactctataatgttcttggtattaaaaaaagcatatttgtcaca 157380531

                                                                             
Query: 2095      gaaatttagttaacatctttacactgaacatgtgtgtatgttgcttnnnnnnntgtaatc 2154
                 |||||||||||||||||||   ||||||||||||||||||||||||       |||||||
Sbjct: 157380530 gaaatttagttaacatcttacaactgaacatgtgtgtatgttgcttagataaatgtaatc 157380471

                                           
Query: 2155      actgtaaacatctatatggtctggga 2180
                 |||||||||||||||||| |||||||
Sbjct: 157380470 actgtaaacatctatatgatctggga 157380445



 Score = 1049 bits (529), Expect = 0.0
 Identities = 529/529 (100%)
 Strand = Plus / Minus

                                                                             
Query: 2         ttttgtgttggctggagccggagcaacaagatggcggcgtcggcggagtgacaggggtcc 61
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157428258 ttttgtgttggctggagccggagcaacaagatggcggcgtcggcggagtgacaggggtcc 157428199

                                                                             
Query: 62        ctccgggcgggagctggcggcagcgggggcagcgggatcgccgccctaactcaccgcgcc 121
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157428198 ctccgggcgggagctggcggcagcgggggcagcgggatcgccgccctaactcaccgcgcc 157428139

                                                                             
Query: 122       ccttttccagccggcgacgtcgccgcgagagcgaggcagcggcggccgccaggaacaagt 181
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157428138 ccttttccagccggcgacgtcgccgcgagagcgaggcagcggcggccgccaggaacaagt 157428079

                                                                             
Query: 182       ggcccggcccggcaaccgcgagcaccgcctcggcagcctgcggcctggccggaggaagcc 241
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157428078 ggcccggcccggcaaccgcgagcaccgcctcggcagcctgcggcctggccggaggaagcc 157428019

                                                                             
Query: 242       tgacagccgcggagatccgggtccgcctggccggttccgggcctgtagcgccgagaagga 301
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157428018 tgacagccgcggagatccgggtccgcctggccggttccgggcctgtagcgccgagaagga 157427959

                                                                             
Query: 302       gccagcgccccccggttcctgccgcgctccgcggacgagcgctagaggcctccgtcgtcc 361
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157427958 gccagcgccccccggttcctgccgcgctccgcggacgagcgctagaggcctccgtcgtcc 157427899

                                                                             
Query: 362       cctagaggtgtcggggcttggccccagcctccatcttctcccaggatggcgagcagcagc 421
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157427898 cctagaggtgtcggggcttggccccagcctccatcttctcccaggatggcgagcagcagc 157427839

                                                                             
Query: 422       ggctccaaggccgagttcattgtcggagggaagtacaaactggtgcggaagatcggctct 481
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157427838 ggctccaaggccgagttcattgtcggagggaagtacaaactggtgcggaagatcggctct 157427779

                                                                  
Query: 482       ggctccttcggggacatttacctggcgatcaacatcaccaacggcgagg 530
                 |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157427778 ggctccttcggggacatttacctggcgatcaacatcaccaacggcgagg 157427730



 Score =  283 bits (143), Expect = 2e-73
 Identities = 143/143 (100%)
 Strand = Plus / Minus

                                                                             
Query: 860       aagttattccttattgattttggtttggccaaaaagtacagagacaacaggacaaggcaa 919
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157395328 aagttattccttattgattttggtttggccaaaaagtacagagacaacaggacaaggcaa 157395269

                                                                             
Query: 920       cacataccatacagagaagataaaaatctcactggcactgcccgatacgctagcatcaat 979
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157395268 cacataccatacagagaagataaaaatctcactggcactgcccgatacgctagcatcaat 157395209

                                        
Query: 980       gcacatcttggtattgaacagag 1002
                 |||||||||||||||||||||||
Sbjct: 157395208 gcacatcttggtattgaacagag 157395186



 Score =  254 bits (128), Expect = 2e-64
 Identities = 128/128 (100%)
 Strand = Plus / Minus

                                                                             
Query: 636       ggtggtatggtcaggaaaaagactacaatgtgctcgtgatggacctgctcggacccagcc 695
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157405705 ggtggtatggtcaggaaaaagactacaatgtgctcgtgatggacctgctcggacccagcc 157405646

                                                                             
Query: 696       tcgaagacctcttcaacttctgttccagaaggttcacaatgaaaactgtactcatgttag 755
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157405645 tcgaagacctcttcaacttctgttccagaaggttcacaatgaaaactgtactcatgttag 157405586

                         
Query: 756       ccgaccag 763
                 ||||||||
Sbjct: 157405585 ccgaccag 157405578



 Score =  232 bits (117), Expect = 7e-58
 Identities = 117/117 (100%)
 Strand = Plus / Minus

                                                                             
Query: 1261      caggaccctgaatcaccaatatgactacacatttgactggacaatgttaaagcagaaagc 1320
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157388664 caggaccctgaatcaccaatatgactacacatttgactggacaatgttaaagcagaaagc 157388605

                                                                          
Query: 1321      agcacagcaagcagcctcttcaagtgggcagggtcagcaggcccaaacccccacagg 1377
                 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157388604 agcacagcaagcagcctcttcaagtgggcagggtcagcaggcccaaacccccacagg 157388548



 Score =  220 bits (111), Expect = 3e-54
 Identities = 111/111 (100%)
 Strand = Plus / Minus

                                                                             
Query: 528       aggaagtggcagtgaagctagaatctcagaaggccaggcatccccagttgctgtacgaga 587
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157427168 aggaagtggcagtgaagctagaatctcagaaggccaggcatccccagttgctgtacgaga 157427109

                                                                    
Query: 588       gcaaactctataagattcttcaaggtggggtcggcatcccccacatacggt 638
                 |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157427108 gcaaactctataagattcttcaaggtggggtcggcatcccccacatacggt 157427058



 Score =  218 bits (110), Expect = 1e-53
 Identities = 110/110 (100%)
 Strand = Plus / Minus

                                                                             
Query: 1155      aggggtttcctgcagaatttgccatgtacttaaactattgtcgtgggctgcgctttgagg 1214
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157390264 aggggtttcctgcagaatttgccatgtacttaaactattgtcgtgggctgcgctttgagg 157390205

                                                                   
Query: 1215      aagccccggattacatgtacctgagacagctattccgcattcttttcagg 1264
                 ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157390204 aagccccggattacatgtacctgagacagctattccgcattcttttcagg 157390155



 Score =  204 bits (103), Expect = 2e-49
 Identities = 103/103 (100%)
 Strand = Plus / Minus

                                                                             
Query: 760       ccagatgatcagtagaattgaatatgtgcatacaaagaactttatacacagagacattaa 819
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157402364 ccagatgatcagtagaattgaatatgtgcatacaaagaactttatacacagagacattaa 157402305

                                                            
Query: 820       accagataacttcctaatgggtattgggcgtcactgtaataag 862
                 |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157402304 accagataacttcctaatgggtattgggcgtcactgtaataag 157402262



 Score =  163 bits (82), Expect = 5e-37
 Identities = 82/82 (100%)
 Strand = Plus / Minus

                                                                             
Query: 1001      agtcgccgagatgacatggaatcattaggatatgttttgatgtattttaatagaaccagt 1060
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157393796 agtcgccgagatgacatggaatcattaggatatgttttgatgtattttaatagaaccagt 157393737

                                       
Query: 1061      ctgccatggcaaggactcaagg 1082
                 ||||||||||||||||||||||
Sbjct: 157393736 ctgccatggcaaggactcaagg 157393715



 Score =  155 bits (78), Expect = 1e-34
 Identities = 78/78 (100%)
 Strand = Plus / Minus

                                                                             
Query: 1080      aggctgcaacaaagaagcaaaaatatgaaaaaattagcgaaaagaagatgtccacacctg 1139
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157392726 aggctgcaacaaagaagcaaaaatatgaaaaaattagcgaaaagaagatgtccacacctg 157392667

                                   
Query: 1140      tggaagttttgtgtaagg 1157
                 ||||||||||||||||||
Sbjct: 157392666 tggaagttttgtgtaagg 157392649


>Sscrofa_Chr01 
||          Length = 315321322

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 50/52 (96%)
 Strand = Plus / Plus

                                                                     
Query: 1910      tgatatggtagcaaccaaagattccagtgtttgagcatatgaaagactctgc 1961
                 ||||||||||||||||||||||||| ||||||| ||||||||||||||||||
Sbjct: 242020232 tgatatggtagcaaccaaagattcctgtgtttgtgcatatgaaagactctgc 242020283


>Sscrofa_Chr09 
||          Length = 153670197

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 97/115 (84%)
 Strand = Plus / Plus

                                                                            
Query: 1839     catccctggggtttgcaagttgttcacttaaaacattcttaacatggttggcttcttgtg 1898
                ||||| || ||||||||||||||||||||||||  ||||||| ||||  |||||||||| 
Sbjct: 96801587 catccatgaggtttgcaagttgttcacttaaaattttcttaaaatggagggcttcttgtt 96801646

                                                                       
Query: 1899     tgcaagccagctgatatggtagcaaccaaagattccagtgtttgagcatatgaaa 1953
                || ||||||| ||||   | |||||||||||||||| |  ||||||||| |||||
Sbjct: 96801647 tgtaagccagatgatgaagaagcaaccaaagattcctggttttgagcatgtgaaa 96801701


  Database: Sscrofa_10.2.fasta
    Posted date:  Nov 16, 2011 10:34 AM
  Number of letters in database: 2,808,509,378
  Number of sequences in database:  4582
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 66,556,173
Number of extensions: 471
Number of successful extensions: 471
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 465
Number of HSP's successfully gapped: 15
Length of query: 2281
Length of database: 2,808,509,378
Length adjustment: 22
Effective length of query: 2259
Effective length of database: 2,808,408,574
Effective search space: 6344194968666
Effective search space used: 6344194968666
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)