Animal-Genome cDNA 20110601C-002701

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-002701
         (1122 letters)

Database: RefSeq49_BP.fasta 
           33,088 sequences; 17,681,374 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001106714.1| coronin, actin binding protein, 1B [Bos taur...   681   0.0  
Alignment   gi|NP_001075059.1| coronin-1C [Bos taurus].                          596   e-170
Alignment   gi|NP_776946.1| coronin-1A [Bos taurus].                             536   e-152
Alignment   gi|NP_001095752.1| coronin-6 [Bos taurus].                           455   e-128
Alignment   gi|NP_001033309.1| coronin-2A [Bos taurus].                          336   2e-92
Alignment   gi|XP_002690572.1| PREDICTED: coronin, actin binding protein, 2...   334   1e-91
Alignment   gi|XP_002706553.1| PREDICTED: coronin, actin binding protein, 2...   256   3e-68
Alignment   gi|NP_001069371.1| coronin-7 [Bos taurus].                           184   9e-47
Alignment   gi|XP_001788914.1| PREDICTED: coronin, actin binding protein, 2...    72   7e-13
Alignment   gi|NP_001070481.1| histone-binding protein RBBP4 [Bos taurus].        65   1e-10

>ref|NP_001106714.1| coronin, actin binding protein, 1B [Bos taurus].
          Length = 488

 Score =  681 bits (1756), Expect = 0.0
 Identities = 324/340 (95%), Positives = 334/340 (98%)
 Frame = +2

Query: 101  MFRKVVRQSKFRHVFGQPVKNDQCYEDIRVSRVTWDSTFCAVNPKFLAVIVEASGGGAFL 280
            MFRKVVRQSKFRHVFGQPVKNDQCYEDIRVSRVTWDSTFCAVNPKFLAVIVEASGGGAFL
Sbjct: 1    MFRKVVRQSKFRHVFGQPVKNDQCYEDIRVSRVTWDSTFCAVNPKFLAVIVEASGGGAFL 60

Query: 281  VLPLSKTGRIDKAYPTVCGHTGPVLDIDWCPHNDEVIASGSEDCTVMVWQIPEHGLTSPL 460
            VLPLSKTGRIDKAYPTVCGHTGPVLDIDWCPHNDEVIASGSEDCTVMVWQIPE+GL SPL
Sbjct: 61   VLPLSKTGRIDKAYPTVCGHTGPVLDIDWCPHNDEVIASGSEDCTVMVWQIPENGLVSPL 120

Query: 461  TEPVVVLEGHTKRVGIITWHPTARNVLLSAGCDNVVLIWNVGTAEELYRLDSLHPDLIYN 640
            TEPVVVLEGHTKRVGI+TWHPTARNVLLSAGCDN+VLIWNVGTAEELYRLDSLHPDLIYN
Sbjct: 121  TEPVVVLEGHTKRVGIVTWHPTARNVLLSAGCDNMVLIWNVGTAEELYRLDSLHPDLIYN 180

Query: 641  ISWNRNGSLFCSACKDKSVRIIDPRRGTLVAEREKAHEGARPMRAIFLADGKVFTTGFSR 820
            +SWNRNGSLFC+ACKDKSVR+IDPRRGTLVAEREKAHEGARPMRAIFLADGKVFTTGFSR
Sbjct: 181  VSWNRNGSLFCTACKDKSVRVIDPRRGTLVAEREKAHEGARPMRAIFLADGKVFTTGFSR 240

Query: 821  MSERQLALWDPENFGEPMALQELDSSNGALLPFYDPDTNVVYVCGKGDSSIRYFEITDES 1000
            MSERQLALWDPENFGEPMALQELDSSNGALLPFYDPDTNVVYVCGKGDSSIRYFEITDE 
Sbjct: 241  MSERQLALWDPENFGEPMALQELDSSNGALLPFYDPDTNVVYVCGKGDSSIRYFEITDEP 300

Query: 1001 PYIHFLNKFTSKEPQKGMGSMPQRGLEVNKWQIAPVYKLH 1120
            PYIHFLN FTSKEPQ+GMGSMP+RGLEV+K +IA  YKLH
Sbjct: 301  PYIHFLNTFTSKEPQRGMGSMPKRGLEVSKCEIARFYKLH 340


>ref|NP_001075059.1| coronin-1C [Bos taurus].
          Length = 474

 Score =  596 bits (1537), Expect = e-170
 Identities = 271/338 (80%), Positives = 311/338 (92%)
 Frame = +2

Query: 107  RKVVRQSKFRHVFGQPVKNDQCYEDIRVSRVTWDSTFCAVNPKFLAVIVEASGGGAFLVL 286
            R+VVRQSKFRHVFGQ VKNDQCY+DIRVSRVTWDS+FCAVNP+F+A+I+EASGGGAFLVL
Sbjct: 2    RRVVRQSKFRHVFGQAVKNDQCYDDIRVSRVTWDSSFCAVNPRFVAIIIEASGGGAFLVL 61

Query: 287  PLSKTGRIDKAYPTVCGHTGPVLDIDWCPHNDEVIASGSEDCTVMVWQIPEHGLTSPLTE 466
            PL KTGRIDK+YPTVCGHTGPVLDIDWCPHND+VIASGSEDCTVMVWQIPE+GLT  LTE
Sbjct: 62   PLHKTGRIDKSYPTVCGHTGPVLDIDWCPHNDQVIASGSEDCTVMVWQIPENGLTLSLTE 121

Query: 467  PVVVLEGHTKRVGIITWHPTARNVLLSAGCDNVVLIWNVGTAEELYRLDSLHPDLIYNIS 646
            PVV+LEGH+KRVGI+ WHPTARNVLLSAGCDN ++IWNVGT E L  LD +H D+IYN+S
Sbjct: 122  PVVILEGHSKRVGIVAWHPTARNVLLSAGCDNAIIIWNVGTGEALINLDDMHSDMIYNVS 181

Query: 647  WNRNGSLFCSACKDKSVRIIDPRRGTLVAEREKAHEGARPMRAIFLADGKVFTTGFSRMS 826
            WNRNGSL C+A KDK VR+IDPR+  +VAE+EKAHEGARPMRAIFLADG VFTTGFSRMS
Sbjct: 182  WNRNGSLICTASKDKKVRVIDPRKQEIVAEKEKAHEGARPMRAIFLADGNVFTTGFSRMS 241

Query: 827  ERQLALWDPENFGEPMALQELDSSNGALLPFYDPDTNVVYVCGKGDSSIRYFEITDESPY 1006
            ERQLALW+P+N  EP+AL E+D+SNG LLPFYDPDT+++Y+CGKGDSSIRYFEITDESPY
Sbjct: 242  ERQLALWNPKNMEEPIALHEMDTSNGVLLPFYDPDTSIIYLCGKGDSSIRYFEITDESPY 301

Query: 1007 IHFLNKFTSKEPQKGMGSMPQRGLEVNKWQIAPVYKLH 1120
            +H+LN F+SKEPQ+GMG MP+RGL+VNK +IA  +KLH
Sbjct: 302  VHYLNTFSSKEPQRGMGYMPKRGLDVNKCEIARFFKLH 339


>ref|NP_776946.1| coronin-1A [Bos taurus].
          Length = 461

 Score =  536 bits (1381), Expect = e-152
 Identities = 243/341 (71%), Positives = 297/341 (87%), Gaps = 1/341 (0%)
 Frame = +2

Query: 101  MFRKVVRQSKFRHVFGQPVKNDQCYEDIRVSRVTWDSTFCAVNPKFLAVIVEASGGGAFL 280
            M R+VVR SKFRHVFGQP K DQCYED+RVS+ TWDS FCAVNPKF+A+I EASGGGAFL
Sbjct: 1    MSRQVVRSSKFRHVFGQPAKADQCYEDVRVSQNTWDSGFCAVNPKFVALICEASGGGAFL 60

Query: 281  VLPLSKTGRIDKAYPTVCGHTGPVLDIDWCPHNDEVIASGSEDCTVMVWQIPEHGLTSPL 460
            VLPL KTGR+DK  P VCGHT PVLDI WCPHND VIASGSEDC+VMVW+IP+ GLT PL
Sbjct: 61   VLPLGKTGRVDKNVPMVCGHTAPVLDIAWCPHNDNVIASGSEDCSVMVWEIPDGGLTLPL 120

Query: 461  TEPVVVLEGHTKRVGIITWHPTARNVLLSAGCDNVVLIWNVGTAEELYRLDS-LHPDLIY 637
             EPVV LEGHTKRVGI+ WHPTA+NVLLSAGCDNV+L+W+VGT   +  L S +HPD IY
Sbjct: 121  REPVVTLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGVAVLTLGSDVHPDTIY 180

Query: 638  NISWNRNGSLFCSACKDKSVRIIDPRRGTLVAEREKAHEGARPMRAIFLADGKVFTTGFS 817
            ++ W+R+G+L C++C+DK VRII+PR+GT+VAE+++ HEG RP+RA+F++DGK+ TTGFS
Sbjct: 181  SVDWSRDGALICTSCRDKRVRIIEPRKGTIVAEKDRPHEGTRPVRAVFVSDGKILTTGFS 240

Query: 818  RMSERQLALWDPENFGEPMALQELDSSNGALLPFYDPDTNVVYVCGKGDSSIRYFEITDE 997
            RMSERQ+ALWD ++  EP++LQELD+S+G LLPF+DPDTN+VY+CGKGDSSIRYFEIT E
Sbjct: 241  RMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSE 300

Query: 998  SPYIHFLNKFTSKEPQKGMGSMPQRGLEVNKWQIAPVYKLH 1120
            +P++H+L+ F+SKE Q+GMG MP+RGLEVNK +IA  YKLH
Sbjct: 301  APFLHYLSMFSSKESQRGMGYMPKRGLEVNKCEIARFYKLH 341


>ref|NP_001095752.1| coronin-6 [Bos taurus].
          Length = 431

 Score =  455 bits (1170), Expect = e-128
 Identities = 214/340 (62%), Positives = 259/340 (76%)
 Frame = +2

Query: 101  MFRKVVRQSKFRHVFGQPVKNDQCYEDIRVSRVTWDSTFCAVNPKFLAVIVEASGGGAFL 280
            M R+VVRQSKFRHVFGQ  K DQ YEDIRVS+VTWDS FCAVNPKFLA+IVEA GGGAF+
Sbjct: 1    MSRRVVRQSKFRHVFGQAAKADQAYEDIRVSKVTWDSAFCAVNPKFLAIIVEAGGGGAFI 60

Query: 281  VLPLSKTGRIDKAYPTVCGHTGPVLDIDWCPHNDEVIASGSEDCTVMVWQIPEHGLTSPL 460
            VLPL+KTGR+DK YP V GHT PVLDIDWCPHND VIAS S+D T+MVWQIP++     +
Sbjct: 61   VLPLAKTGRVDKNYPLVTGHTAPVLDIDWCPHNDNVIASASDDTTIMVWQIPDYTPVRSI 120

Query: 461  TEPVVVLEGHTKRVGIITWHPTARNVLLSAGCDNVVLIWNVGTAEELYRLDSLHPDLIYN 640
            TEP++ LEGH+KRVGI++WHPTARNVLLSAG DNV++IWNVGT E L  LD +HPD+I++
Sbjct: 121  TEPIITLEGHSKRVGILSWHPTARNVLLSAGGDNVIIIWNVGTGEVLLSLDDMHPDVIHS 180

Query: 641  ISWNRNGSLFCSACKDKSVRIIDPRRGTLVAEREKAHEGARPMRAIFLADGKVFTTGFSR 820
            + WN NGSL  + CKDK++RIIDPR+G +VA                             
Sbjct: 181  VCWNTNGSLLATTCKDKTLRIIDPRKGQVVA----------------------------- 211

Query: 821  MSERQLALWDPENFGEPMALQELDSSNGALLPFYDPDTNVVYVCGKGDSSIRYFEITDES 1000
                        NF EP+ALQE+D+SNG LLPFYDPD+++VY+CGKGDSSIRYFEIT+E 
Sbjct: 212  -----------NNFEEPVALQEMDTSNGVLLPFYDPDSSIVYLCGKGDSSIRYFEITEEP 260

Query: 1001 PYIHFLNKFTSKEPQKGMGSMPQRGLEVNKWQIAPVYKLH 1120
            P++H+LN F+SKEPQ+GMG MP+RGL+V+K +IA  YKLH
Sbjct: 261  PFVHYLNTFSSKEPQRGMGFMPKRGLDVSKCEIARFYKLH 300


>ref|NP_001033309.1| coronin-2A [Bos taurus].
          Length = 525

 Score =  336 bits (862), Expect = 2e-92
 Identities = 158/338 (46%), Positives = 231/338 (68%), Gaps = 5/338 (1%)
 Frame = +2

Query: 119  RQSKFRHVFGQPVKNDQCYEDIRVSRVTWDSTFCAVNPKFLAVIVEASGGGAFLVLPLSK 298
            R SKFRHVFG+P   + CY+ + ++    D+ FCAVNP F+AV+ E +GGGAFLV+PL +
Sbjct: 8    RSSKFRHVFGKPASKENCYDSVPITHSVQDNHFCAVNPHFIAVVTECTGGGAFLVIPLHQ 67

Query: 299  TGRIDKAYPTVCGHTGPVLDIDWCPHNDEVIASGSEDCTVMVWQIPEHGLTSPLTEPVVV 478
            TG++D  YP VCGH G VLD+ W P ND  IAS SED T+ +W IP+  LT  LT     
Sbjct: 68   TGKLDPHYPKVCGHRGNVLDVKWNPFNDFEIASCSEDATIKIWDIPKQLLTKNLTAFRKE 127

Query: 479  LEGHTKRVGIITWHPTARNVLLSAGCDNVVLIWNVGTAEEL----YRLDSLHPDLIYNIS 646
            L GH ++VG++ WHPTA N+L S+G D  V++WN+ + E +     +  + H D+I ++S
Sbjct: 128  LVGHARKVGLVEWHPTAANILFSSGYDYKVMVWNLDSKESVIMSPVKTINCHQDVILSMS 187

Query: 647  WNRNGSLFCSACKDKSVRIIDPRRGTLVAEREKAHEGARPMRAIFLAD-GKVFTTGFSRM 823
            +N NGSL  +ACKD+ +R++DPR GT++  +E  ++G R  + +FL +  K+ +TG SR 
Sbjct: 188  FNTNGSLLATACKDRKIRVLDPRAGTVL--QEANYKGHRANKVLFLGNLKKLLSTGTSRW 245

Query: 824  SERQLALWDPENFGEPMALQELDSSNGALLPFYDPDTNVVYVCGKGDSSIRYFEITDESP 1003
            + RQ+ALWD ++   P+   +LD S+G L PFYD DTN++YV GKGD +I Y+EI+   P
Sbjct: 246  NNRQMALWDQDDLSVPVTEVDLDGSSGVLFPFYDADTNMLYVVGKGDRNIHYYEISANKP 305

Query: 1004 YIHFLNKFTSKEPQKGMGSMPQRGLEVNKWQIAPVYKL 1117
            ++++L ++ S  PQKG+G MP+RGL+V+  +I   YKL
Sbjct: 306  HLNYLMEYHSYNPQKGIGVMPKRGLDVSSCEIFRFYKL 343


>ref|XP_002690572.1| PREDICTED: coronin, actin binding protein, 2B-like [Bos taurus].
          Length = 442

 Score =  334 bits (856), Expect = 1e-91
 Identities = 161/340 (47%), Positives = 232/340 (68%), Gaps = 2/340 (0%)
 Frame = +2

Query: 104  FRKVVRQSKFRHVFGQPVKNDQCYEDIRVSRVTWDSTFCAVNPKFLAVIVEASGGGAFLV 283
            +R   R SKFR+V+G+    + C++ I +++   D+ FCAVN +FLA++ E++GGG+FLV
Sbjct: 3    WRPQYRSSKFRNVYGKVANREHCFDGIPITKNVHDNHFCAVNARFLAIVTESAGGGSFLV 62

Query: 284  LPLSKTGRIDKAYPTVCGHTGPVLDIDWCPHNDEVIASGSEDCTVMVWQIPEHGLTSPLT 463
            +PL +TGRI+  YP VCGH G VLDI W P  D +IAS SED +V +W+IPE GL   +T
Sbjct: 63   IPLEQTGRIEPNYPKVCGHQGNVLDIKWNPFIDNIIASCSEDTSVRIWEIPEGGLKRNMT 122

Query: 464  EPVVVLEGHTKRVGIITWHPTARNVLLSAGCDNVVLIWNVGTAEELYRLDSLHPDLIYNI 643
            E ++ L GH++RVG++ WHPT  N+L SAG D  VLIWN+   E +  +D  H D+I  +
Sbjct: 123  EALLELHGHSRRVGLVEWHPTTNNILFSAGYDYKVLIWNLDVGEPVKMID-CHSDVILCM 181

Query: 644  SWNRNGSLFCSACKDKSVRIIDPRRGTLVAERE-KAHEGARPMRAIFLADGK-VFTTGFS 817
            S+N +GSL  + CKDK +R+I+PR G ++ E   K H   R  R +FL + K + TTG S
Sbjct: 182  SFNTDGSLLTTTCKDKKLRVIEPRSGRVLQEANCKNH---RVNRVVFLGNMKRLLTTGVS 238

Query: 818  RMSERQLALWDPENFGEPMALQELDSSNGALLPFYDPDTNVVYVCGKGDSSIRYFEITDE 997
            R + RQ+ALWD E+   P+  +E+D  +G L PFYD DT+++Y+ GKGD +IRY+EI+ E
Sbjct: 239  RWNTRQIALWDQEDLSMPLIEEEIDGLSGLLFPFYDADTHMLYLAGKGDGNIRYYEISTE 298

Query: 998  SPYIHFLNKFTSKEPQKGMGSMPQRGLEVNKWQIAPVYKL 1117
             PY+ +L +F S  PQKG+G MP+ GL+V+  ++   YKL
Sbjct: 299  KPYLSYLMEFRSPAPQKGLGVMPKHGLDVSACEVFRFYKL 338


>ref|XP_002706553.1| PREDICTED: coronin, actin binding protein, 2B, partial [Bos taurus].
          Length = 430

 Score =  256 bits (654), Expect = 3e-68
 Identities = 128/267 (47%), Positives = 178/267 (66%), Gaps = 2/267 (0%)
 Frame = +2

Query: 299  TGRIDKAYPTVCGHTGPVLDIDWCPHNDEVIASGSEDCTVMVWQIPEHGLTSPLTEPVVV 478
            TGRI+  YP VCGH G VLDI W P  D +IAS SED +V +W+IPE GL   +TE ++ 
Sbjct: 1    TGRIEPNYPKVCGHQGNVLDIKWNPFIDNIIASCSEDTSVRIWEIPEGGLKRNMTEALLE 60

Query: 479  LEGHTKRVGIITWHPTARNVLLSAGCDNVVLIWNVGTAEELYRLDSLHPDLIYNISWNRN 658
            L GH++RVG++ WHPT  N+L SAG D  VLIWN+   E +  +D  H D+I  +S+N +
Sbjct: 61   LHGHSRRVGLVEWHPTTNNILFSAGYDYKVLIWNLDVGEPVKMID-CHSDVILCMSFNTD 119

Query: 659  GSLFCSACKDKSVRIIDPRRGTLVAERE-KAHEGARPMRAIFLADGK-VFTTGFSRMSER 832
            GSL  + CKDK +R+I+PR G ++ E   K H   R  R +FL + K + TTG SR + R
Sbjct: 120  GSLLTTTCKDKKLRVIEPRSGRVLQEANCKNH---RVNRVVFLGNMKRLLTTGVSRWNTR 176

Query: 833  QLALWDPENFGEPMALQELDSSNGALLPFYDPDTNVVYVCGKGDSSIRYFEITDESPYIH 1012
            Q+ALWD E+   P+  +E+D  +G L PFYD DT+++Y+ GKGD +IRY+EI+ E PY+ 
Sbjct: 177  QIALWDQEDLSMPLIEEEIDGLSGLLFPFYDADTHMLYLAGKGDGNIRYYEISTEKPYLS 236

Query: 1013 FLNKFTSKEPQKGMGSMPQRGLEVNKW 1093
            +L +F S  PQKG+  +  + L+VN W
Sbjct: 237  YLMEFRSPAPQKGL--VKNQPLKVNSW 261


>ref|NP_001069371.1| coronin-7 [Bos taurus].
          Length = 915

 Score =  184 bits (468), Expect = 9e-47
 Identities = 114/337 (33%), Positives = 173/337 (51%), Gaps = 6/337 (1%)
 Frame = +2

Query: 125  SKFRHVFGQPVKNDQCYEDIRVSRVTWDST---FCAVNPKFLAVIVEASGGGAFLVLPLS 295
            SKFRH  G  +  D    +++   +T       FCA   +    ++  S GG   VL L 
Sbjct: 462  SKFRHAQGSVLHRDSHITNLKGLNLTTPGESDGFCANQLRVAVPLL--SSGGQVAVLELR 519

Query: 296  KTGRI-DKAYPTVCGHTGPVLDIDWCPHNDEVIASGSEDCTVMVWQIPEHGLTSPLTEPV 472
            K GR+ D A PT+      V D+ W P +   +A   ED  + +W++P  GL   LT P 
Sbjct: 520  KPGRLPDTALPTLQNGVA-VTDLAWDPFDPHRLAVAGEDARIRLWRVPPDGLQEVLTMPE 578

Query: 473  VVLEGHTKRVGIITWHPTARNVLLSAGCDNVVLIWNVGTAEELYRLDSLHPDLIYNISWN 652
             VL GHT+++  + +HP A +VL S+  D  V IW++    E  RL   H D I+ ++W+
Sbjct: 579  AVLTGHTEKIYSLRFHPLAADVLASSSYDLTVRIWDLKVGAEQLRLQG-HRDQIFGLAWS 637

Query: 653  RNGSLFCSACKDKSVRIIDPRRGTLVAEREKAHEGARPMRAIFLADGK-VFTTGFSRMSE 829
             +G    + CKD  +RI +PR      +     EGAR  R +++ DG  +  +GF   SE
Sbjct: 638  PDGQQLATVCKDGRLRIYEPRGSPEPLQEGPGPEGARGARVVWVCDGHYLLVSGFDSRSE 697

Query: 830  RQLALWDPENF-GEPMALQELDSSNGALLPFYDPDTNVVYVCGKGDSSIRYFEITDESPY 1006
            RQL L+  +   G P A+  LD +   LLP YDPDT +V + GKGD+ +  +E+   +P+
Sbjct: 698  RQLLLYSAKALAGGPSAVLGLDVAPSTLLPSYDPDTGLVLLTGKGDTRVFLYELLPGAPF 757

Query: 1007 IHFLNKFTSKEPQKGMGSMPQRGLEVNKWQIAPVYKL 1117
                N FTS +P KG   +P+   +V + + A   +L
Sbjct: 758  FLECNSFTSPDPHKGFILLPKTECDVREVEFARCLRL 794



 Score =  158 bits (400), Expect = 7e-39
 Identities = 101/333 (30%), Positives = 171/333 (51%), Gaps = 2/333 (0%)
 Frame = +2

Query: 125  SKFRHVFGQPVKNDQCYEDIRVSRVTWDSTFCAVNPKFLAVIVEASGGGAFLVLPLSKTG 304
            SKFRH   +  + +    DIR    T  S    +      +   +   G   ++PL   G
Sbjct: 7    SKFRHTEARQPRREAWIGDIRAG--TAPSCGNHIKASCSLIAFNSDHPGVLGIVPLESQG 64

Query: 305  RIDKAYPTVCG-HTGPVLDIDWCPHNDEVIASGSEDCTVMVWQIPEHGLTSPLTEPVVVL 481
              DK   T  G H+  V D+D+ P +D ++A+ S D TV +W++P  G   P + P ++L
Sbjct: 65   E-DKRQVTHLGCHSDLVTDLDFSPFDDFLLATASADRTVKLWRLPLSGQALP-SGPGLLL 122

Query: 482  EGHTKRVGIITWHPTARNVLLSAGCDNVVLIWNVGTAEELYRLDSLHPDLIYNISWNRNG 661
                 +V ++ +HPTA  VLLSA     V +W+    + L  L + H DL+   +W+R+G
Sbjct: 123  GPEDAQVEVLQFHPTADGVLLSAA-GRAVKVWDATKQQPLTEL-ATHGDLVQGAAWSRDG 180

Query: 662  SLFCSACKDKSVRIIDPRRGTLVAEREKAHEGARPMRAIFLADGK-VFTTGFSRMSERQL 838
            +L  + CKDK +RI DPR     A+   AHE +R  R ++    + + +TGF++M ER++
Sbjct: 181  ALLGTTCKDKQLRIFDPRAKPEAAQSTPAHENSRDGRLVWTGTQEYLVSTGFNQMREREV 240

Query: 839  ALWDPENFGEPMALQELDSSNGALLPFYDPDTNVVYVCGKGDSSIRYFEITDESPYIHFL 1018
             LWD   F   +    LD+S  +L+P  DPD+ ++ + GKG++ +  +E   + P +  +
Sbjct: 241  KLWDTRLFSAALTSLTLDTSPRSLVPLLDPDSGLLVLAGKGENQLYCYEAAPQQPALSPV 300

Query: 1019 NKFTSKEPQKGMGSMPQRGLEVNKWQIAPVYKL 1117
             +   +   +G   +P+R L V   ++  V +L
Sbjct: 301  TQCLLESVLRGAALVPRRALAVMGCEVLRVLQL 333


>ref|XP_001788914.1| PREDICTED: coronin, actin binding protein, 2A-like [Bos taurus].
          Length = 327

 Score = 72.4 bits (176), Expect = 7e-13
 Identities = 29/69 (42%), Positives = 50/69 (72%)
 Frame = +2

Query: 104 FRKVVRQSKFRHVFGQPVKNDQCYEDIRVSRVTWDSTFCAVNPKFLAVIVEASGGGAFLV 283
           +R   R SKFR+V+G+    + C++ I +++   D+ FCAVN +FLA++ E++GGG+FLV
Sbjct: 101 WRPQYRSSKFRNVYGKVANREHCFDGIPITKNVHDNHFCAVNARFLAIVTESAGGGSFLV 160

Query: 284 LPLSKTGRI 310
           +PL + G++
Sbjct: 161 IPLEQLGKL 169


>ref|NP_001070481.1| histone-binding protein RBBP4 [Bos taurus].
          Length = 425

 Score = 65.1 bits (157), Expect = 1e-10
 Identities = 47/220 (21%), Positives = 99/220 (45%), Gaps = 5/220 (2%)
 Frame = +2

Query: 149 QPVKNDQCYEDIRVSRVTWDSTFCAVNPKFLAVIVEASGGGAFLVLPLS---KTGRIDKA 319
           +P  + +C  D+R+     +    + NP     ++ AS      +  +S   K G++  A
Sbjct: 160 KPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDA 219

Query: 320 YPTVCGHTGPVLDIDWCPHNDEVIASGSEDCTVMVWQIPEHGLTSPLTEPVVVLEGHTKR 499
                GHT  V D+ W   ++ +  S ++D  +M+W    +  + P       ++ HT  
Sbjct: 220 KTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHS----VDAHTAE 275

Query: 500 VGIITWHPTARNVLLSAGCDNVVLIWNVGTAE-ELYRLDSLHPDLIYNISWN-RNGSLFC 673
           V  ++++P +  +L +   D  V +W++   + +L+  +S H D I+ + W+  N ++  
Sbjct: 276 VNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFES-HKDEIFQVQWSPHNETILA 334

Query: 674 SACKDKSVRIIDPRRGTLVAEREKAHEGARPMRAIFLADG 793
           S+  D+ + + D  +       E A +G  P   +F+  G
Sbjct: 335 SSGTDRRLNVWDLSKIGEEQSPEDAEDG--PPELLFIHGG 372



 Score = 53.9 bits (128), Expect = 3e-07
 Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 8/97 (8%)
 Frame = +2

Query: 338 HTGPVLDIDWCPHNDEVIASGSEDCTVMVW--------QIPEHGLTSPLTEPVVVLEGHT 493
           H   +  + W PHN+ ++AS   D  + VW        Q PE     P  E + +  GHT
Sbjct: 316 HKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGP-PELLFIHGGHT 374

Query: 494 KRVGIITWHPTARNVLLSAGCDNVVLIWNVGTAEELY 604
            ++   +W+P    V+ S   DN++ +W +  AE +Y
Sbjct: 375 AKISDFSWNPNEPWVICSVSEDNIMQVWQM--AENIY 409



 Score = 52.8 bits (125), Expect = 6e-07
 Identities = 47/193 (24%), Positives = 84/193 (43%), Gaps = 19/193 (9%)
 Frame = +2

Query: 338 HTGPVLDIDWCPHNDEVIASGSEDCTVMVWQIPEH-GLTSPLTE--PVVVLEGHTKRVGI 508
           H G V    + P N  +IA+ +    V+V+   +H     P  E  P + L GH K    
Sbjct: 123 HEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYG 182

Query: 509 ITWHPTARNVLLSAGCDNVVLIWNV------GTAEELYRLDSLHPDLIYNISWN-RNGSL 667
           ++W+P     LLSA  D+ + +W++      G   +   + + H  ++ ++SW+  + SL
Sbjct: 183 LSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESL 242

Query: 668 FCSACKDKSVRIIDPRRGTLVAEREKAHEGARPMRAIFLADGKVFTTGFSRMSE------ 829
           F S   D+ + I D R          ++  ++P  ++     +V    F+  SE      
Sbjct: 243 FGSVADDQKLMIWDTR----------SNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATG 292

Query: 830 ---RQLALWDPEN 859
              + +ALWD  N
Sbjct: 293 SADKTVALWDLRN 305



 Score = 50.4 bits (119), Expect = 3e-06
 Identities = 44/203 (21%), Positives = 83/203 (40%), Gaps = 10/203 (4%)
 Frame = +2

Query: 335 GHTGPVLDIDWCPHNDEVIASGSEDCTVMVWQIPEHGLTSPLTEPVVVLEGHTKRVGIIT 514
           GH      + W P+    + S S+D T+ +W I        + +   +  GHT  V  ++
Sbjct: 175 GHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVS 234

Query: 515 WHPTARNVLLSAGCDNVVLIWNV---GTAEELYRLDSLHPDLIYNISWNRNGS-LFCSAC 682
           WH    ++  S   D  ++IW+     T++  + +D+ H   +  +S+N     +  +  
Sbjct: 235 WHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDA-HTAEVNCLSFNPYSEFILATGS 293

Query: 683 KDKSVRIIDPRRGTLVAEREKAHEGA------RPMRAIFLADGKVFTTGFSRMSERQLAL 844
            DK+V + D R   L     ++H+         P     LA         S  ++R+L +
Sbjct: 294 ADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILA---------SSGTDRRLNV 344

Query: 845 WDPENFGEPMALQELDSSNGALL 913
           WD    GE  + ++ +     LL
Sbjct: 345 WDLSKIGEEQSPEDAEDGPPELL 367


  Database: RefSeq49_BP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 17,681,374
  Number of sequences in database:  33,088
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 42,719,968
Number of extensions: 1248994
Number of successful extensions: 6340
Number of sequences better than 1.0e-05: 40
Number of HSP's gapped: 6121
Number of HSP's successfully gapped: 61
Length of query: 374
Length of database: 17,681,374
Length adjustment: 104
Effective length of query: 270
Effective length of database: 14,240,222
Effective search space: 3844859940
Effective search space used: 3844859940
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-002701
         (1122 letters)

Database: RefSeq49_CP.fasta 
           33,336 sequences; 18,874,504 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_864679.1| PREDICTED: similar to coronin, actin binding pr...   675   0.0  
Alignment   gi|XP_864662.1| PREDICTED: similar to coronin, actin binding pr...   675   0.0  
Alignment   gi|XP_533215.2| PREDICTED: similar to coronin, actin binding pr...   675   0.0  
Alignment   gi|XP_543444.2| PREDICTED: similar to Coronin-1C (Coronin-3) (h...   596   e-170
Alignment   gi|XP_864648.1| PREDICTED: similar to coronin, actin binding pr...   575   e-164
Alignment   gi|XP_548302.2| PREDICTED: similar to coronin relative protein ...   537   e-153
Alignment   gi|XP_547069.2| PREDICTED: similar to Coronin-1A (Coronin-like ...   524   e-149
Alignment   gi|XP_868335.1| PREDICTED: similar to coronin, actin binding pr...   458   e-129
Alignment   gi|XP_538747.2| PREDICTED: similar to coronin, actin binding pr...   337   2e-92
Alignment   gi|XP_544743.2| PREDICTED: similar to Coronin-2B (Coronin-like ...   335   6e-92

>ref|XP_864679.1| PREDICTED: similar to coronin, actin binding protein, 1B isoform 4
            [Canis familiaris].
          Length = 478

 Score =  675 bits (1741), Expect = 0.0
 Identities = 323/339 (95%), Positives = 332/339 (97%)
 Frame = +2

Query: 104  FRKVVRQSKFRHVFGQPVKNDQCYEDIRVSRVTWDSTFCAVNPKFLAVIVEASGGGAFLV 283
            FRKVVRQSKFRHVFGQPVKNDQCYEDIRVSRVTWDSTFCAVNP+FLAVIVEASGGGAFLV
Sbjct: 3    FRKVVRQSKFRHVFGQPVKNDQCYEDIRVSRVTWDSTFCAVNPRFLAVIVEASGGGAFLV 62

Query: 284  LPLSKTGRIDKAYPTVCGHTGPVLDIDWCPHNDEVIASGSEDCTVMVWQIPEHGLTSPLT 463
            LPLSKTGRIDKAYPTVCGHTGPVLDIDWCPHNDEVIASGSEDCTVMVWQIPE+GLTSPLT
Sbjct: 63   LPLSKTGRIDKAYPTVCGHTGPVLDIDWCPHNDEVIASGSEDCTVMVWQIPENGLTSPLT 122

Query: 464  EPVVVLEGHTKRVGIITWHPTARNVLLSAGCDNVVLIWNVGTAEELYRLDSLHPDLIYNI 643
            EPVVVLEGHTKRVGI+TWHPTARNVLLSAGCDNVVLIWNVGTAEELYRLDSLHPDLIYN+
Sbjct: 123  EPVVVLEGHTKRVGIVTWHPTARNVLLSAGCDNVVLIWNVGTAEELYRLDSLHPDLIYNV 182

Query: 644  SWNRNGSLFCSACKDKSVRIIDPRRGTLVAEREKAHEGARPMRAIFLADGKVFTTGFSRM 823
            SWNRNGSLFCSACKDKSVRIIDPRRGTLVAEREKAHEGARPMRAIFLADGKVFTTGFSRM
Sbjct: 183  SWNRNGSLFCSACKDKSVRIIDPRRGTLVAEREKAHEGARPMRAIFLADGKVFTTGFSRM 242

Query: 824  SERQLALWDPENFGEPMALQELDSSNGALLPFYDPDTNVVYVCGKGDSSIRYFEITDESP 1003
            SERQLALWDPEN  EPMALQELDSSNGALLPFYDPDT+VVYVCGKGDSSIRYFEITDE P
Sbjct: 243  SERQLALWDPENLEEPMALQELDSSNGALLPFYDPDTSVVYVCGKGDSSIRYFEITDEPP 302

Query: 1004 YIHFLNKFTSKEPQKGMGSMPQRGLEVNKWQIAPVYKLH 1120
            YIHFLN FTSKEPQ+GMGSMP+RGLEV+K +IA  YKLH
Sbjct: 303  YIHFLNTFTSKEPQRGMGSMPKRGLEVSKCEIARFYKLH 341


>ref|XP_864662.1| PREDICTED: similar to coronin, actin binding protein, 1B isoform 3
            [Canis familiaris].
          Length = 475

 Score =  675 bits (1741), Expect = 0.0
 Identities = 323/339 (95%), Positives = 332/339 (97%)
 Frame = +2

Query: 104  FRKVVRQSKFRHVFGQPVKNDQCYEDIRVSRVTWDSTFCAVNPKFLAVIVEASGGGAFLV 283
            FRKVVRQSKFRHVFGQPVKNDQCYEDIRVSRVTWDSTFCAVNP+FLAVIVEASGGGAFLV
Sbjct: 3    FRKVVRQSKFRHVFGQPVKNDQCYEDIRVSRVTWDSTFCAVNPRFLAVIVEASGGGAFLV 62

Query: 284  LPLSKTGRIDKAYPTVCGHTGPVLDIDWCPHNDEVIASGSEDCTVMVWQIPEHGLTSPLT 463
            LPLSKTGRIDKAYPTVCGHTGPVLDIDWCPHNDEVIASGSEDCTVMVWQIPE+GLTSPLT
Sbjct: 63   LPLSKTGRIDKAYPTVCGHTGPVLDIDWCPHNDEVIASGSEDCTVMVWQIPENGLTSPLT 122

Query: 464  EPVVVLEGHTKRVGIITWHPTARNVLLSAGCDNVVLIWNVGTAEELYRLDSLHPDLIYNI 643
            EPVVVLEGHTKRVGI+TWHPTARNVLLSAGCDNVVLIWNVGTAEELYRLDSLHPDLIYN+
Sbjct: 123  EPVVVLEGHTKRVGIVTWHPTARNVLLSAGCDNVVLIWNVGTAEELYRLDSLHPDLIYNV 182

Query: 644  SWNRNGSLFCSACKDKSVRIIDPRRGTLVAEREKAHEGARPMRAIFLADGKVFTTGFSRM 823
            SWNRNGSLFCSACKDKSVRIIDPRRGTLVAEREKAHEGARPMRAIFLADGKVFTTGFSRM
Sbjct: 183  SWNRNGSLFCSACKDKSVRIIDPRRGTLVAEREKAHEGARPMRAIFLADGKVFTTGFSRM 242

Query: 824  SERQLALWDPENFGEPMALQELDSSNGALLPFYDPDTNVVYVCGKGDSSIRYFEITDESP 1003
            SERQLALWDPEN  EPMALQELDSSNGALLPFYDPDT+VVYVCGKGDSSIRYFEITDE P
Sbjct: 243  SERQLALWDPENLEEPMALQELDSSNGALLPFYDPDTSVVYVCGKGDSSIRYFEITDEPP 302

Query: 1004 YIHFLNKFTSKEPQKGMGSMPQRGLEVNKWQIAPVYKLH 1120
            YIHFLN FTSKEPQ+GMGSMP+RGLEV+K +IA  YKLH
Sbjct: 303  YIHFLNTFTSKEPQRGMGSMPKRGLEVSKCEIARFYKLH 341


>ref|XP_533215.2| PREDICTED: similar to coronin, actin binding protein, 1B isoform 1
            [Canis familiaris].
          Length = 489

 Score =  675 bits (1741), Expect = 0.0
 Identities = 323/339 (95%), Positives = 332/339 (97%)
 Frame = +2

Query: 104  FRKVVRQSKFRHVFGQPVKNDQCYEDIRVSRVTWDSTFCAVNPKFLAVIVEASGGGAFLV 283
            FRKVVRQSKFRHVFGQPVKNDQCYEDIRVSRVTWDSTFCAVNP+FLAVIVEASGGGAFLV
Sbjct: 3    FRKVVRQSKFRHVFGQPVKNDQCYEDIRVSRVTWDSTFCAVNPRFLAVIVEASGGGAFLV 62

Query: 284  LPLSKTGRIDKAYPTVCGHTGPVLDIDWCPHNDEVIASGSEDCTVMVWQIPEHGLTSPLT 463
            LPLSKTGRIDKAYPTVCGHTGPVLDIDWCPHNDEVIASGSEDCTVMVWQIPE+GLTSPLT
Sbjct: 63   LPLSKTGRIDKAYPTVCGHTGPVLDIDWCPHNDEVIASGSEDCTVMVWQIPENGLTSPLT 122

Query: 464  EPVVVLEGHTKRVGIITWHPTARNVLLSAGCDNVVLIWNVGTAEELYRLDSLHPDLIYNI 643
            EPVVVLEGHTKRVGI+TWHPTARNVLLSAGCDNVVLIWNVGTAEELYRLDSLHPDLIYN+
Sbjct: 123  EPVVVLEGHTKRVGIVTWHPTARNVLLSAGCDNVVLIWNVGTAEELYRLDSLHPDLIYNV 182

Query: 644  SWNRNGSLFCSACKDKSVRIIDPRRGTLVAEREKAHEGARPMRAIFLADGKVFTTGFSRM 823
            SWNRNGSLFCSACKDKSVRIIDPRRGTLVAEREKAHEGARPMRAIFLADGKVFTTGFSRM
Sbjct: 183  SWNRNGSLFCSACKDKSVRIIDPRRGTLVAEREKAHEGARPMRAIFLADGKVFTTGFSRM 242

Query: 824  SERQLALWDPENFGEPMALQELDSSNGALLPFYDPDTNVVYVCGKGDSSIRYFEITDESP 1003
            SERQLALWDPEN  EPMALQELDSSNGALLPFYDPDT+VVYVCGKGDSSIRYFEITDE P
Sbjct: 243  SERQLALWDPENLEEPMALQELDSSNGALLPFYDPDTSVVYVCGKGDSSIRYFEITDEPP 302

Query: 1004 YIHFLNKFTSKEPQKGMGSMPQRGLEVNKWQIAPVYKLH 1120
            YIHFLN FTSKEPQ+GMGSMP+RGLEV+K +IA  YKLH
Sbjct: 303  YIHFLNTFTSKEPQRGMGSMPKRGLEVSKCEIARFYKLH 341


>ref|XP_543444.2| PREDICTED: similar to Coronin-1C (Coronin-3) (hCRNN4) [Canis
            familiaris].
          Length = 474

 Score =  596 bits (1537), Expect = e-170
 Identities = 271/338 (80%), Positives = 311/338 (92%)
 Frame = +2

Query: 107  RKVVRQSKFRHVFGQPVKNDQCYEDIRVSRVTWDSTFCAVNPKFLAVIVEASGGGAFLVL 286
            R+VVRQSKFRHVFGQ VKNDQCY+DIRVSRVTWDS+FCAVNP+F+A+I+EASGGGAFLVL
Sbjct: 2    RRVVRQSKFRHVFGQAVKNDQCYDDIRVSRVTWDSSFCAVNPRFVAIIIEASGGGAFLVL 61

Query: 287  PLSKTGRIDKAYPTVCGHTGPVLDIDWCPHNDEVIASGSEDCTVMVWQIPEHGLTSPLTE 466
            PL KTGRIDK+YPTVCGHTGPVLDIDWCPHND+VIASGSEDCTVMVWQIPE+GLT  LTE
Sbjct: 62   PLHKTGRIDKSYPTVCGHTGPVLDIDWCPHNDQVIASGSEDCTVMVWQIPENGLTLSLTE 121

Query: 467  PVVVLEGHTKRVGIITWHPTARNVLLSAGCDNVVLIWNVGTAEELYRLDSLHPDLIYNIS 646
            PVV+LEGH+KRVGI+ WHPTARNVLLSAGCDN ++IWNVGT E L  LD +H D+IYN+S
Sbjct: 122  PVVILEGHSKRVGIVAWHPTARNVLLSAGCDNAIIIWNVGTGEALINLDDMHSDMIYNVS 181

Query: 647  WNRNGSLFCSACKDKSVRIIDPRRGTLVAEREKAHEGARPMRAIFLADGKVFTTGFSRMS 826
            WNRNGSL C+A KDK VR+IDPR+  +VAE+EKAHEGARPMRAIFLADG VFTTGFSRMS
Sbjct: 182  WNRNGSLICTASKDKKVRVIDPRKQEIVAEKEKAHEGARPMRAIFLADGNVFTTGFSRMS 241

Query: 827  ERQLALWDPENFGEPMALQELDSSNGALLPFYDPDTNVVYVCGKGDSSIRYFEITDESPY 1006
            ERQLALW+P+N  EP+AL E+D+SNG LLPFYDPDT+++Y+CGKGDSSIRYFEITDESPY
Sbjct: 242  ERQLALWNPKNMQEPIALHEMDTSNGVLLPFYDPDTSIIYLCGKGDSSIRYFEITDESPY 301

Query: 1007 IHFLNKFTSKEPQKGMGSMPQRGLEVNKWQIAPVYKLH 1120
            +H+LN F+SKEPQ+GMG MP+RGL+VNK +IA  +KLH
Sbjct: 302  VHYLNTFSSKEPQRGMGYMPKRGLDVNKCEIARFFKLH 339


>ref|XP_864648.1| PREDICTED: similar to coronin, actin binding protein, 1B isoform 2
            [Canis familiaris].
          Length = 434

 Score =  575 bits (1481), Expect = e-164
 Identities = 283/339 (83%), Positives = 292/339 (86%)
 Frame = +2

Query: 104  FRKVVRQSKFRHVFGQPVKNDQCYEDIRVSRVTWDSTFCAVNPKFLAVIVEASGGGAFLV 283
            FRKVVRQSKFRHVFGQPVKNDQCYEDIRVSRVTWDSTFCAVNP+FLAVIVEASGGGAFLV
Sbjct: 3    FRKVVRQSKFRHVFGQPVKNDQCYEDIRVSRVTWDSTFCAVNPRFLAVIVEASGGGAFLV 62

Query: 284  LPLSKTGRIDKAYPTVCGHTGPVLDIDWCPHNDEVIASGSEDCTVMVWQIPEHGLTSPLT 463
            LPLSKTGRIDKAYPTVCGHTGPVLDIDWCPHNDEVIASGSEDCTVMVWQIPE+GLTSPLT
Sbjct: 63   LPLSKTGRIDKAYPTVCGHTGPVLDIDWCPHNDEVIASGSEDCTVMVWQIPENGLTSPLT 122

Query: 464  EPVVVLEGHTKRVGIITWHPTARNVLLSAGCDNVVLIWNVGTAEELYRLDSLHPDLIYNI 643
            EPVVVLEGHTKRVGI+TWHPTARNVLLSAGCDNVVLIWNVGTAEELYRLDSLHPDLIYN+
Sbjct: 123  EPVVVLEGHTKRVGIVTWHPTARNVLLSAGCDNVVLIWNVGTAEELYRLDSLHPDLIYNV 182

Query: 644  SWNRNGSLFCSACKDKSVRIIDPRRGTLVAEREKAHEGARPMRAIFLADGKVFTTGFSRM 823
            SWNRNGSLFCSACKDKSVRIIDPRRGTLVA                              
Sbjct: 183  SWNRNGSLFCSACKDKSVRIIDPRRGTLVA------------------------------ 212

Query: 824  SERQLALWDPENFGEPMALQELDSSNGALLPFYDPDTNVVYVCGKGDSSIRYFEITDESP 1003
                      EN  EPMALQELDSSNGALLPFYDPDT+VVYVCGKGDSSIRYFEITDE P
Sbjct: 213  ----------ENLEEPMALQELDSSNGALLPFYDPDTSVVYVCGKGDSSIRYFEITDEPP 262

Query: 1004 YIHFLNKFTSKEPQKGMGSMPQRGLEVNKWQIAPVYKLH 1120
            YIHFLN FTSKEPQ+GMGSMP+RGLEV+K +IA  YKLH
Sbjct: 263  YIHFLNTFTSKEPQRGMGSMPKRGLEVSKCEIARFYKLH 301


>ref|XP_548302.2| PREDICTED: similar to coronin relative protein isoform 1 [Canis
            familiaris].
          Length = 472

 Score =  537 bits (1383), Expect = e-153
 Identities = 245/340 (72%), Positives = 292/340 (85%)
 Frame = +2

Query: 101  MFRKVVRQSKFRHVFGQPVKNDQCYEDIRVSRVTWDSTFCAVNPKFLAVIVEASGGGAFL 280
            M R+VVRQSKFRHVFGQ  K DQ YEDIRVS+VTWDS+FCAVNPKFLA+IVEA GGGAF+
Sbjct: 1    MSRRVVRQSKFRHVFGQAAKADQSYEDIRVSKVTWDSSFCAVNPKFLAIIVEAGGGGAFI 60

Query: 281  VLPLSKTGRIDKAYPTVCGHTGPVLDIDWCPHNDEVIASGSEDCTVMVWQIPEHGLTSPL 460
            VLPL+KTGR+DK YP V GHT PVLDIDWCPHND VIAS S+D TVMVWQIP++     +
Sbjct: 61   VLPLAKTGRVDKNYPLVTGHTAPVLDIDWCPHNDNVIASASDDTTVMVWQIPDYTPVRNI 120

Query: 461  TEPVVVLEGHTKRVGIITWHPTARNVLLSAGCDNVVLIWNVGTAEELYRLDSLHPDLIYN 640
            TEP++ LEGH+KRVGI++WHPTARNVLLSAG DNV++IWNVGT E L  LD LHPD+I++
Sbjct: 121  TEPIITLEGHSKRVGILSWHPTARNVLLSAGGDNVIIIWNVGTGEVLLSLDDLHPDVIHS 180

Query: 641  ISWNRNGSLFCSACKDKSVRIIDPRRGTLVAEREKAHEGARPMRAIFLADGKVFTTGFSR 820
            + WN NGSL  + CKDK++RIIDPR+G +VAER  AHEG RPMRA+F   G +FTTGF+R
Sbjct: 181  VCWNSNGSLLATTCKDKTLRIIDPRKGQVVAERFAAHEGMRPMRAVFTRQGHIFTTGFTR 240

Query: 821  MSERQLALWDPENFGEPMALQELDSSNGALLPFYDPDTNVVYVCGKGDSSIRYFEITDES 1000
            MS+R+L LWDP NF EP+ALQE+D+SNG LLPFYDPD+++VY+CGKGDSSIRYFEITDE 
Sbjct: 241  MSQRELGLWDPNNFEEPVALQEMDTSNGVLLPFYDPDSSIVYLCGKGDSSIRYFEITDEP 300

Query: 1001 PYIHFLNKFTSKEPQKGMGSMPQRGLEVNKWQIAPVYKLH 1120
            P++H+LN F+SKEPQ+GMG MP+RGLEV+K +IA  YKLH
Sbjct: 301  PFVHYLNTFSSKEPQRGMGFMPKRGLEVSKCEIARFYKLH 340


>ref|XP_547069.2| PREDICTED: similar to Coronin-1A (Coronin-like protein p57)
            (Coronin-like protein A) (CLIPINA) (Tryptophan
            aspartate-containing coat protein) (TACO) isoform 1
            [Canis familiaris].
          Length = 495

 Score =  524 bits (1349), Expect = e-149
 Identities = 245/375 (65%), Positives = 298/375 (79%), Gaps = 35/375 (9%)
 Frame = +2

Query: 101  MFRKVVRQSKFRHVFGQPVKNDQCYEDIRVSRVTWDSTFCAVNPKFLAVIVEASGGGAFL 280
            M R+VVR SKFRHVFGQP K DQCYED+RVS+ TWDS FCAVNPKF+A+I EASGGGAFL
Sbjct: 1    MSRQVVRSSKFRHVFGQPAKADQCYEDVRVSQTTWDSGFCAVNPKFMALICEASGGGAFL 60

Query: 281  VLPLSK----------------------------------TGRIDKAYPTVCGHTGPVLD 358
            VLPL K                                  TGR+DK  PTVCGHT PVLD
Sbjct: 61   VLPLGKEAGVGVPALRASARKACPTSQGLHCLPLWASLRGTGRVDKNAPTVCGHTAPVLD 120

Query: 359  IDWCPHNDEVIASGSEDCTVMVWQIPEHGLTSPLTEPVVVLEGHTKRVGIITWHPTARNV 538
            I WCPHND VIASGSEDCTVMVW+IP+ GLT PL EPVV LEGHTKRVGI+ WHPTA+NV
Sbjct: 121  IAWCPHNDNVIASGSEDCTVMVWEIPDGGLTLPLREPVVTLEGHTKRVGIVAWHPTAQNV 180

Query: 539  LLSAGCDNVVLIWNVGTAEELYRLDS-LHPDLIYNISWNRNGSLFCSACKDKSVRIIDPR 715
            LLSAGCDNV+L+W+VGT   +  L S +HPD IY++ W+R+G+L C++C+DK VRII+PR
Sbjct: 181  LLSAGCDNVILVWDVGTGAAVLTLGSDVHPDTIYSVDWSRDGALICTSCRDKRVRIIEPR 240

Query: 716  RGTLVAEREKAHEGARPMRAIFLADGKVFTTGFSRMSERQLALWDPENFGEPMALQELDS 895
            +GT+VAE+++ HEG RP+RA+F++DGK+ TTGFSRMSERQ+ALWD ++  EP++LQELD+
Sbjct: 241  KGTVVAEKDRPHEGTRPVRAVFVSDGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDT 300

Query: 896  SNGALLPFYDPDTNVVYVCGKGDSSIRYFEITDESPYIHFLNKFTSKEPQKGMGSMPQRG 1075
            S+G LLPF+DPDTN+VY+CGKGDSSIRYFEIT E+P++H+L+ F+SKE Q+GMG MP+RG
Sbjct: 301  SSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRG 360

Query: 1076 LEVNKWQIAPVYKLH 1120
            LEVNK +IA  YKLH
Sbjct: 361  LEVNKCEIARFYKLH 375


>ref|XP_868335.1| PREDICTED: similar to coronin, actin binding protein 6 isoform C
            isoform 3 [Canis familiaris].
          Length = 431

 Score =  458 bits (1179), Expect = e-129
 Identities = 218/340 (64%), Positives = 260/340 (76%)
 Frame = +2

Query: 101  MFRKVVRQSKFRHVFGQPVKNDQCYEDIRVSRVTWDSTFCAVNPKFLAVIVEASGGGAFL 280
            M R+VVRQSKFRHVFGQ  K DQ YEDIRVS+VTWDS+FCAVNPKFLA+IVEA GGGAF+
Sbjct: 1    MSRRVVRQSKFRHVFGQAAKADQSYEDIRVSKVTWDSSFCAVNPKFLAIIVEAGGGGAFI 60

Query: 281  VLPLSKTGRIDKAYPTVCGHTGPVLDIDWCPHNDEVIASGSEDCTVMVWQIPEHGLTSPL 460
            VLPL+KTGR+DK YP V GHT PVLDIDWCPHND VIAS S+D TVMVWQIP++     +
Sbjct: 61   VLPLAKTGRVDKNYPLVTGHTAPVLDIDWCPHNDNVIASASDDTTVMVWQIPDYTPVRNI 120

Query: 461  TEPVVVLEGHTKRVGIITWHPTARNVLLSAGCDNVVLIWNVGTAEELYRLDSLHPDLIYN 640
            TEP++ LEGH+KRVGI++WHPTARNVLLSAG DNV++IWNVGT E L  LD LHPD+I++
Sbjct: 121  TEPIITLEGHSKRVGILSWHPTARNVLLSAGGDNVIIIWNVGTGEVLLSLDDLHPDVIHS 180

Query: 641  ISWNRNGSLFCSACKDKSVRIIDPRRGTLVAEREKAHEGARPMRAIFLADGKVFTTGFSR 820
            + WN NGSL  + CKDK++RIIDPR+G +VA                             
Sbjct: 181  VCWNSNGSLLATTCKDKTLRIIDPRKGQVVA----------------------------- 211

Query: 821  MSERQLALWDPENFGEPMALQELDSSNGALLPFYDPDTNVVYVCGKGDSSIRYFEITDES 1000
                        NF EP+ALQE+D+SNG LLPFYDPD+++VY+CGKGDSSIRYFEITDE 
Sbjct: 212  -----------NNFEEPVALQEMDTSNGVLLPFYDPDSSIVYLCGKGDSSIRYFEITDEP 260

Query: 1001 PYIHFLNKFTSKEPQKGMGSMPQRGLEVNKWQIAPVYKLH 1120
            P++H+LN F+SKEPQ+GMG MP+RGLEV+K +IA  YKLH
Sbjct: 261  PFVHYLNTFSSKEPQRGMGFMPKRGLEVSKCEIARFYKLH 300


>ref|XP_538747.2| PREDICTED: similar to coronin, actin binding protein, 2A [Canis
            familiaris].
          Length = 540

 Score =  337 bits (863), Expect = 2e-92
 Identities = 162/338 (47%), Positives = 224/338 (66%), Gaps = 5/338 (1%)
 Frame = +2

Query: 119  RQSKFRHVFGQPVKNDQCYEDIRVSRVTWDSTFCAVNPKFLAVIVEASGGGAFLVLPLSK 298
            R SKFRHVFG+P   + CY+ + ++    D+ FCAVNP F+AV+ E S GGAF V+PL +
Sbjct: 29   RSSKFRHVFGKPASKENCYDSVPITHSVQDNHFCAVNPYFIAVVTECSCGGAFFVIPLHQ 88

Query: 299  TGRIDKAYPTVCGHTGPVLDIDWCPHNDEVIASGSEDCTVMVWQIPEHGLTSPLTEPVVV 478
            TG++D  YP VCGH G VLDI W P ND  IAS SED T+ +W IP+  LT  LT     
Sbjct: 89   TGKLDPHYPKVCGHKGNVLDIKWNPFNDFEIASCSEDTTIKIWDIPKQLLTKNLTACKKE 148

Query: 479  LEGHTKRVGIITWHPTARNVLLSAGCDNVVLIWNVGTAEEL----YRLDSLHPDLIYNIS 646
            L GHT+RVG++ WHPTA N+L S+G D  V++WN+ T E +     R    H  +I ++S
Sbjct: 149  LIGHTRRVGLVEWHPTAANILFSSGYDYKVMVWNLDTKESVIMNPVRTIGCHQGVILSMS 208

Query: 647  WNRNGSLFCSACKDKSVRIIDPRRGTLVAEREKAHEGARPMRAIFLAD-GKVFTTGFSRM 823
            +N NGSL  + CKD+ +RI+DPR G ++ E      G R  + +FL D  K+ +TG SR 
Sbjct: 209  FNTNGSLLATTCKDRKIRILDPRAGAVLQEANCT--GHRANKVLFLGDLNKLLSTGTSRW 266

Query: 824  SERQLALWDPENFGEPMALQELDSSNGALLPFYDPDTNVVYVCGKGDSSIRYFEITDESP 1003
            + RQLA+WD +N   P++  +LD S+G L PFYD DTN++YV GKGD +IRY+E++ + P
Sbjct: 267  NNRQLAVWDQDNLSVPLSEVDLDGSSGVLFPFYDVDTNMLYVVGKGDGNIRYYEVSADKP 326

Query: 1004 YIHFLNKFTSKEPQKGMGSMPQRGLEVNKWQIAPVYKL 1117
            ++ +L ++ S  PQKG+G MP+RGL+V   +I   YKL
Sbjct: 327  HLSYLTEYRSLTPQKGIGIMPKRGLDVTSCEIFRFYKL 364


>ref|XP_544743.2| PREDICTED: similar to Coronin-2B (Coronin-like protein C) (ClipinC)
            (Protein FC96) [Canis familiaris].
          Length = 501

 Score =  335 bits (858), Expect = 6e-92
 Identities = 167/370 (45%), Positives = 243/370 (65%), Gaps = 2/370 (0%)
 Frame = +2

Query: 14   SSLIPASCFPETGIRSHPRTVLQPPGVPVMFRKVVRQSKFRHVFGQPVKNDQCYEDIRVS 193
            +S  PA   PE        T++ P    + +R   R SKFR+V+G+    + C++ I ++
Sbjct: 2    ASWCPAKALPEAVTCL---TLVFPGPSQMSWRPQYRSSKFRNVYGKVANREHCFDGIPIT 58

Query: 194  RVTWDSTFCAVNPKFLAVIVEASGGGAFLVLPLSKTGRIDKAYPTVCGHTGPVLDIDWCP 373
            +   D+ FCAVN +FLA++ E++GGG+FLV+PL +TGRI+  YP VCGH G VLDI W P
Sbjct: 59   KNVHDNHFCAVNARFLAIVTESAGGGSFLVIPLEQTGRIEPNYPKVCGHQGNVLDIKWNP 118

Query: 374  HNDEVIASGSEDCTVMVWQIPEHGLTSPLTEPVVVLEGHTKRVGIITWHPTARNVLLSAG 553
              D +IAS SED +V +W+IPE GL   +TE ++ L GH++RVG++ WHPT  N+L SAG
Sbjct: 119  FIDNIIASCSEDTSVRIWEIPEGGLKRNMTEALLELHGHSRRVGLVEWHPTTNNILFSAG 178

Query: 554  CDNVVLIWNVGTAEELYRLDSLHPDLIYNISWNRNGSLFCSACKDKSVRIIDPRRGTLVA 733
             D  VLIWN+   E +  +D  H D+I  +S+N +GSL  + CKDK +R+I+PR G ++ 
Sbjct: 179  YDYKVLIWNLDVGEPVKMID-CHSDVILCMSFNTDGSLLTTTCKDKKLRVIEPRSGRVLQ 237

Query: 734  ERE-KAHEGARPMRAIFLADGK-VFTTGFSRMSERQLALWDPENFGEPMALQELDSSNGA 907
            E   K H   R  R +FL + K + TTG SR + RQ+ALWD E+   P+  +E+D  +G 
Sbjct: 238  EANCKNH---RVNRVVFLGNMKRLLTTGVSRWNTRQIALWDQEDLSMPLIEEEIDGLSGL 294

Query: 908  LLPFYDPDTNVVYVCGKGDSSIRYFEITDESPYIHFLNKFTSKEPQKGMGSMPQRGLEVN 1087
            L PFYD DT+++Y+ GKGD +IRY+EI+ E P++ +L +F S  PQKG+G MP+ GL+V+
Sbjct: 295  LFPFYDADTHMLYLAGKGDGNIRYYEISTEKPFLSYLMEFRSPAPQKGLGVMPKHGLDVS 354

Query: 1088 KWQIAPVYKL 1117
              ++   YKL
Sbjct: 355  ACEVFRFYKL 364


  Database: RefSeq49_CP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,874,504
  Number of sequences in database:  33,336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 44,445,673
Number of extensions: 1286695
Number of successful extensions: 6983
Number of sequences better than 1.0e-05: 64
Number of HSP's gapped: 6654
Number of HSP's successfully gapped: 117
Length of query: 374
Length of database: 18,874,504
Length adjustment: 104
Effective length of query: 270
Effective length of database: 15,407,560
Effective search space: 4160041200
Effective search space used: 4160041200
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-002701
         (1122 letters)

Database: RefSeq49_HP.fasta 
           32,964 sequences; 18,297,164 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001018080.1| coronin-1B [Homo sapiens].                        671   0.0  
Alignment   gi|NP_065174.1| coronin-1B [Homo sapiens].                           671   0.0  
Alignment   gi|NP_055140.1| coronin-1C isoform 1 [Homo sapiens].                 596   e-170
Alignment   gi|NP_116243.2| coronin-6 [Homo sapiens].                            535   e-152
Alignment   gi|NP_001180262.1| coronin-1A [Homo sapiens].                        531   e-151
Alignment   gi|NP_009005.1| coronin-1A [Homo sapiens].                           531   e-151
Alignment   gi|NP_003380.3| coronin-2A [Homo sapiens].                           346   3e-95
Alignment   gi|NP_438171.1| coronin-2A [Homo sapiens].                           346   3e-95
Alignment   gi|NP_006082.3| coronin-2B isoform 1 [Homo sapiens].                 334   1e-91
Alignment   gi|NP_001177386.1| coronin-2B isoform 2 [Homo sapiens].              334   1e-91

>ref|NP_001018080.1| coronin-1B [Homo sapiens].
          Length = 489

 Score =  671 bits (1731), Expect = 0.0
 Identities = 322/339 (94%), Positives = 330/339 (97%)
 Frame = +2

Query: 104  FRKVVRQSKFRHVFGQPVKNDQCYEDIRVSRVTWDSTFCAVNPKFLAVIVEASGGGAFLV 283
            FRKVVRQSKFRHVFGQPVKNDQCYEDIRVSRVTWDSTFCAVNPKFLAVIVEASGGGAFLV
Sbjct: 3    FRKVVRQSKFRHVFGQPVKNDQCYEDIRVSRVTWDSTFCAVNPKFLAVIVEASGGGAFLV 62

Query: 284  LPLSKTGRIDKAYPTVCGHTGPVLDIDWCPHNDEVIASGSEDCTVMVWQIPEHGLTSPLT 463
            LPLSKTGRIDKAYPTVCGHTGPVLDIDWCPHNDEVIASGSEDCTVMVWQIPE+GLTSPLT
Sbjct: 63   LPLSKTGRIDKAYPTVCGHTGPVLDIDWCPHNDEVIASGSEDCTVMVWQIPENGLTSPLT 122

Query: 464  EPVVVLEGHTKRVGIITWHPTARNVLLSAGCDNVVLIWNVGTAEELYRLDSLHPDLIYNI 643
            EPVVVLEGHTKRVGII WHPTARNVLLSAGCDNVVLIWNVGTAEELYRLDSLHPDLIYN+
Sbjct: 123  EPVVVLEGHTKRVGIIAWHPTARNVLLSAGCDNVVLIWNVGTAEELYRLDSLHPDLIYNV 182

Query: 644  SWNRNGSLFCSACKDKSVRIIDPRRGTLVAEREKAHEGARPMRAIFLADGKVFTTGFSRM 823
            SWN NGSLFCSACKDKSVRIIDPRRGTLVAEREKAHEGARPMRAIFLADGKVFTTGFSRM
Sbjct: 183  SWNHNGSLFCSACKDKSVRIIDPRRGTLVAEREKAHEGARPMRAIFLADGKVFTTGFSRM 242

Query: 824  SERQLALWDPENFGEPMALQELDSSNGALLPFYDPDTNVVYVCGKGDSSIRYFEITDESP 1003
            SERQLALWDPEN  EPMALQELDSSNGALLPFYDPDT+VVYVCGKGDSSIRYFEIT+E P
Sbjct: 243  SERQLALWDPENLEEPMALQELDSSNGALLPFYDPDTSVVYVCGKGDSSIRYFEITEEPP 302

Query: 1004 YIHFLNKFTSKEPQKGMGSMPQRGLEVNKWQIAPVYKLH 1120
            YIHFLN FTSKEPQ+GMGSMP+RGLEV+K +IA  YKLH
Sbjct: 303  YIHFLNTFTSKEPQRGMGSMPKRGLEVSKCEIARFYKLH 341


>ref|NP_065174.1| coronin-1B [Homo sapiens].
          Length = 489

 Score =  671 bits (1731), Expect = 0.0
 Identities = 322/339 (94%), Positives = 330/339 (97%)
 Frame = +2

Query: 104  FRKVVRQSKFRHVFGQPVKNDQCYEDIRVSRVTWDSTFCAVNPKFLAVIVEASGGGAFLV 283
            FRKVVRQSKFRHVFGQPVKNDQCYEDIRVSRVTWDSTFCAVNPKFLAVIVEASGGGAFLV
Sbjct: 3    FRKVVRQSKFRHVFGQPVKNDQCYEDIRVSRVTWDSTFCAVNPKFLAVIVEASGGGAFLV 62

Query: 284  LPLSKTGRIDKAYPTVCGHTGPVLDIDWCPHNDEVIASGSEDCTVMVWQIPEHGLTSPLT 463
            LPLSKTGRIDKAYPTVCGHTGPVLDIDWCPHNDEVIASGSEDCTVMVWQIPE+GLTSPLT
Sbjct: 63   LPLSKTGRIDKAYPTVCGHTGPVLDIDWCPHNDEVIASGSEDCTVMVWQIPENGLTSPLT 122

Query: 464  EPVVVLEGHTKRVGIITWHPTARNVLLSAGCDNVVLIWNVGTAEELYRLDSLHPDLIYNI 643
            EPVVVLEGHTKRVGII WHPTARNVLLSAGCDNVVLIWNVGTAEELYRLDSLHPDLIYN+
Sbjct: 123  EPVVVLEGHTKRVGIIAWHPTARNVLLSAGCDNVVLIWNVGTAEELYRLDSLHPDLIYNV 182

Query: 644  SWNRNGSLFCSACKDKSVRIIDPRRGTLVAEREKAHEGARPMRAIFLADGKVFTTGFSRM 823
            SWN NGSLFCSACKDKSVRIIDPRRGTLVAEREKAHEGARPMRAIFLADGKVFTTGFSRM
Sbjct: 183  SWNHNGSLFCSACKDKSVRIIDPRRGTLVAEREKAHEGARPMRAIFLADGKVFTTGFSRM 242

Query: 824  SERQLALWDPENFGEPMALQELDSSNGALLPFYDPDTNVVYVCGKGDSSIRYFEITDESP 1003
            SERQLALWDPEN  EPMALQELDSSNGALLPFYDPDT+VVYVCGKGDSSIRYFEIT+E P
Sbjct: 243  SERQLALWDPENLEEPMALQELDSSNGALLPFYDPDTSVVYVCGKGDSSIRYFEITEEPP 302

Query: 1004 YIHFLNKFTSKEPQKGMGSMPQRGLEVNKWQIAPVYKLH 1120
            YIHFLN FTSKEPQ+GMGSMP+RGLEV+K +IA  YKLH
Sbjct: 303  YIHFLNTFTSKEPQRGMGSMPKRGLEVSKCEIARFYKLH 341


>ref|NP_055140.1| coronin-1C isoform 1 [Homo sapiens].
          Length = 474

 Score =  596 bits (1537), Expect = e-170
 Identities = 271/338 (80%), Positives = 311/338 (92%)
 Frame = +2

Query: 107  RKVVRQSKFRHVFGQPVKNDQCYEDIRVSRVTWDSTFCAVNPKFLAVIVEASGGGAFLVL 286
            R+VVRQSKFRHVFGQ VKNDQCY+DIRVSRVTWDS+FCAVNP+F+A+I+EASGGGAFLVL
Sbjct: 2    RRVVRQSKFRHVFGQAVKNDQCYDDIRVSRVTWDSSFCAVNPRFVAIIIEASGGGAFLVL 61

Query: 287  PLSKTGRIDKAYPTVCGHTGPVLDIDWCPHNDEVIASGSEDCTVMVWQIPEHGLTSPLTE 466
            PL KTGRIDK+YPTVCGHTGPVLDIDWCPHND+VIASGSEDCTVMVWQIPE+GLT  LTE
Sbjct: 62   PLHKTGRIDKSYPTVCGHTGPVLDIDWCPHNDQVIASGSEDCTVMVWQIPENGLTLSLTE 121

Query: 467  PVVVLEGHTKRVGIITWHPTARNVLLSAGCDNVVLIWNVGTAEELYRLDSLHPDLIYNIS 646
            PVV+LEGH+KRVGI+ WHPTARNVLLSAGCDN ++IWNVGT E L  LD +H D+IYN+S
Sbjct: 122  PVVILEGHSKRVGIVAWHPTARNVLLSAGCDNAIIIWNVGTGEALINLDDMHSDMIYNVS 181

Query: 647  WNRNGSLFCSACKDKSVRIIDPRRGTLVAEREKAHEGARPMRAIFLADGKVFTTGFSRMS 826
            WNRNGSL C+A KDK VR+IDPR+  +VAE+EKAHEGARPMRAIFLADG VFTTGFSRMS
Sbjct: 182  WNRNGSLICTASKDKKVRVIDPRKQEIVAEKEKAHEGARPMRAIFLADGNVFTTGFSRMS 241

Query: 827  ERQLALWDPENFGEPMALQELDSSNGALLPFYDPDTNVVYVCGKGDSSIRYFEITDESPY 1006
            ERQLALW+P+N  EP+AL E+D+SNG LLPFYDPDT+++Y+CGKGDSSIRYFEITDESPY
Sbjct: 242  ERQLALWNPKNMQEPIALHEMDTSNGVLLPFYDPDTSIIYLCGKGDSSIRYFEITDESPY 301

Query: 1007 IHFLNKFTSKEPQKGMGSMPQRGLEVNKWQIAPVYKLH 1120
            +H+LN F+SKEPQ+GMG MP+RGL+VNK +IA  +KLH
Sbjct: 302  VHYLNTFSSKEPQRGMGYMPKRGLDVNKCEIARFFKLH 339


>ref|NP_116243.2| coronin-6 [Homo sapiens].
          Length = 472

 Score =  535 bits (1377), Expect = e-152
 Identities = 242/340 (71%), Positives = 292/340 (85%)
 Frame = +2

Query: 101  MFRKVVRQSKFRHVFGQPVKNDQCYEDIRVSRVTWDSTFCAVNPKFLAVIVEASGGGAFL 280
            M R+VVRQSKFRHVFGQ  K DQ YEDIRVS+VTWDS+FCAVNPKFLA+IVEA GGGAF+
Sbjct: 1    MSRRVVRQSKFRHVFGQAAKADQAYEDIRVSKVTWDSSFCAVNPKFLAIIVEAGGGGAFI 60

Query: 281  VLPLSKTGRIDKAYPTVCGHTGPVLDIDWCPHNDEVIASGSEDCTVMVWQIPEHGLTSPL 460
            VLPL+KTGR+DK YP V GHT PVLDIDWCPHND VIAS S+D T+MVWQIP++     +
Sbjct: 61   VLPLAKTGRVDKNYPLVTGHTAPVLDIDWCPHNDNVIASASDDTTIMVWQIPDYTPMRNI 120

Query: 461  TEPVVVLEGHTKRVGIITWHPTARNVLLSAGCDNVVLIWNVGTAEELYRLDSLHPDLIYN 640
            TEP++ LEGH+KRVGI++WHPTARNVLLSAG DNV++IWNVGT E L  LD +HPD+I++
Sbjct: 121  TEPIITLEGHSKRVGILSWHPTARNVLLSAGGDNVIIIWNVGTGEVLLSLDDMHPDVIHS 180

Query: 641  ISWNRNGSLFCSACKDKSVRIIDPRRGTLVAEREKAHEGARPMRAIFLADGKVFTTGFSR 820
            + WN NGSL  + CKDK++RIIDPR+G +VAER  AHEG RPMRA+F   G +FTTGF+R
Sbjct: 181  VCWNSNGSLLATTCKDKTLRIIDPRKGQVVAERFAAHEGMRPMRAVFTRQGHIFTTGFTR 240

Query: 821  MSERQLALWDPENFGEPMALQELDSSNGALLPFYDPDTNVVYVCGKGDSSIRYFEITDES 1000
            MS+R+L LWDP NF EP+ALQE+D+SNG LLPFYDPD+++VY+CGKGDSSIRYFEITDE 
Sbjct: 241  MSQRELGLWDPNNFEEPVALQEMDTSNGVLLPFYDPDSSIVYLCGKGDSSIRYFEITDEP 300

Query: 1001 PYIHFLNKFTSKEPQKGMGSMPQRGLEVNKWQIAPVYKLH 1120
            P++H+LN F+SKEPQ+GMG MP+RGL+V+K +IA  YKLH
Sbjct: 301  PFVHYLNTFSSKEPQRGMGFMPKRGLDVSKCEIARFYKLH 340


>ref|NP_001180262.1| coronin-1A [Homo sapiens].
          Length = 461

 Score =  531 bits (1369), Expect = e-151
 Identities = 240/341 (70%), Positives = 294/341 (86%), Gaps = 1/341 (0%)
 Frame = +2

Query: 101  MFRKVVRQSKFRHVFGQPVKNDQCYEDIRVSRVTWDSTFCAVNPKFLAVIVEASGGGAFL 280
            M R+VVR SKFRHVFGQP K DQCYED+RVS+ TWDS FCAVNPKF+A+I EASGGGAFL
Sbjct: 1    MSRQVVRSSKFRHVFGQPAKADQCYEDVRVSQTTWDSGFCAVNPKFVALICEASGGGAFL 60

Query: 281  VLPLSKTGRIDKAYPTVCGHTGPVLDIDWCPHNDEVIASGSEDCTVMVWQIPEHGLTSPL 460
            VLPL KTGR+DK  PTVCGHT PVLDI WCPHND VIASGSEDCTVMVW+IP+ GL  PL
Sbjct: 61   VLPLGKTGRVDKNAPTVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLMLPL 120

Query: 461  TEPVVVLEGHTKRVGIITWHPTARNVLLSAGCDNVVLIWNVGTAEELYRL-DSLHPDLIY 637
             EPVV LEGHTKRVGI+ WH TA+NVLLSAGCDNV+++W+VGT   +  L   +HPD IY
Sbjct: 121  REPVVTLEGHTKRVGIVAWHTTAQNVLLSAGCDNVIMVWDVGTGAAMLTLGPEVHPDTIY 180

Query: 638  NISWNRNGSLFCSACKDKSVRIIDPRRGTLVAEREKAHEGARPMRAIFLADGKVFTTGFS 817
            ++ W+R+G L C++C+DK VRII+PR+GT+VAE+++ HEG RP+RA+F+++GK+ TTGFS
Sbjct: 181  SVDWSRDGGLICTSCRDKRVRIIEPRKGTVVAEKDRPHEGTRPVRAVFVSEGKILTTGFS 240

Query: 818  RMSERQLALWDPENFGEPMALQELDSSNGALLPFYDPDTNVVYVCGKGDSSIRYFEITDE 997
            RMSERQ+ALWD ++  EP++LQELD+S+G LLPF+DPDTN+VY+CGKGDSSIRYFEIT E
Sbjct: 241  RMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSE 300

Query: 998  SPYIHFLNKFTSKEPQKGMGSMPQRGLEVNKWQIAPVYKLH 1120
            +P++H+L+ F+SKE Q+GMG MP+RGLEVNK +IA  YKLH
Sbjct: 301  APFLHYLSMFSSKESQRGMGYMPKRGLEVNKCEIARFYKLH 341


>ref|NP_009005.1| coronin-1A [Homo sapiens].
          Length = 461

 Score =  531 bits (1369), Expect = e-151
 Identities = 240/341 (70%), Positives = 294/341 (86%), Gaps = 1/341 (0%)
 Frame = +2

Query: 101  MFRKVVRQSKFRHVFGQPVKNDQCYEDIRVSRVTWDSTFCAVNPKFLAVIVEASGGGAFL 280
            M R+VVR SKFRHVFGQP K DQCYED+RVS+ TWDS FCAVNPKF+A+I EASGGGAFL
Sbjct: 1    MSRQVVRSSKFRHVFGQPAKADQCYEDVRVSQTTWDSGFCAVNPKFVALICEASGGGAFL 60

Query: 281  VLPLSKTGRIDKAYPTVCGHTGPVLDIDWCPHNDEVIASGSEDCTVMVWQIPEHGLTSPL 460
            VLPL KTGR+DK  PTVCGHT PVLDI WCPHND VIASGSEDCTVMVW+IP+ GL  PL
Sbjct: 61   VLPLGKTGRVDKNAPTVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLMLPL 120

Query: 461  TEPVVVLEGHTKRVGIITWHPTARNVLLSAGCDNVVLIWNVGTAEELYRL-DSLHPDLIY 637
             EPVV LEGHTKRVGI+ WH TA+NVLLSAGCDNV+++W+VGT   +  L   +HPD IY
Sbjct: 121  REPVVTLEGHTKRVGIVAWHTTAQNVLLSAGCDNVIMVWDVGTGAAMLTLGPEVHPDTIY 180

Query: 638  NISWNRNGSLFCSACKDKSVRIIDPRRGTLVAEREKAHEGARPMRAIFLADGKVFTTGFS 817
            ++ W+R+G L C++C+DK VRII+PR+GT+VAE+++ HEG RP+RA+F+++GK+ TTGFS
Sbjct: 181  SVDWSRDGGLICTSCRDKRVRIIEPRKGTVVAEKDRPHEGTRPVRAVFVSEGKILTTGFS 240

Query: 818  RMSERQLALWDPENFGEPMALQELDSSNGALLPFYDPDTNVVYVCGKGDSSIRYFEITDE 997
            RMSERQ+ALWD ++  EP++LQELD+S+G LLPF+DPDTN+VY+CGKGDSSIRYFEIT E
Sbjct: 241  RMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSE 300

Query: 998  SPYIHFLNKFTSKEPQKGMGSMPQRGLEVNKWQIAPVYKLH 1120
            +P++H+L+ F+SKE Q+GMG MP+RGLEVNK +IA  YKLH
Sbjct: 301  APFLHYLSMFSSKESQRGMGYMPKRGLEVNKCEIARFYKLH 341


>ref|NP_003380.3| coronin-2A [Homo sapiens].
          Length = 525

 Score =  346 bits (887), Expect = 3e-95
 Identities = 163/338 (48%), Positives = 233/338 (68%), Gaps = 5/338 (1%)
 Frame = +2

Query: 119  RQSKFRHVFGQPVKNDQCYEDIRVSRVTWDSTFCAVNPKFLAVIVEASGGGAFLVLPLSK 298
            R SKFRHVFG+P   + CY+ + ++R   D+ FCAVNP F+AV+ E +GGGAFLV+PL +
Sbjct: 8    RSSKFRHVFGKPASKENCYDSVPITRSVHDNHFCAVNPHFIAVVTECAGGGAFLVIPLHQ 67

Query: 299  TGRIDKAYPTVCGHTGPVLDIDWCPHNDEVIASGSEDCTVMVWQIPEHGLTSPLTEPVVV 478
            TG++D  YP VCGH G VLD+ W P +D  IAS SED T+ +W IP+  LT  LT     
Sbjct: 68   TGKLDPHYPKVCGHRGNVLDVKWNPFDDFEIASCSEDATIKIWSIPKQLLTRNLTAYRKE 127

Query: 479  LEGHTKRVGIITWHPTARNVLLSAGCDNVVLIWNVGTAEELYRLD----SLHPDLIYNIS 646
            L GH +RVG++ WHPTA N+L SAG D  V+IWN+ T E +        S H D+I ++S
Sbjct: 128  LVGHARRVGLVEWHPTAANILFSAGYDYKVMIWNLDTKESVITSPMSTISCHQDVILSMS 187

Query: 647  WNRNGSLFCSACKDKSVRIIDPRRGTLVAEREKAHEGARPMRAIFLAD-GKVFTTGFSRM 823
            +N NGSL  + CKD+ +R+IDPR GT++  +E +++G R  + +FL +  K+ +TG SR 
Sbjct: 188  FNTNGSLLATTCKDRKIRVIDPRAGTVL--QEASYKGHRASKVLFLGNLKKLMSTGTSRW 245

Query: 824  SERQLALWDPENFGEPMALQELDSSNGALLPFYDPDTNVVYVCGKGDSSIRYFEITDESP 1003
            + RQ+ALWD +N   P+  ++LD S+G L PFYD DT+++YV GKGD +IRY+E++ + P
Sbjct: 246  NNRQVALWDQDNLSVPLMEEDLDGSSGVLFPFYDADTSMLYVVGKGDGNIRYYEVSADKP 305

Query: 1004 YIHFLNKFTSKEPQKGMGSMPQRGLEVNKWQIAPVYKL 1117
            ++ +L ++ S  PQKG+G MP+RGL+V+  +I   YKL
Sbjct: 306  HLSYLTEYRSYNPQKGIGVMPKRGLDVSSCEIFRFYKL 343


>ref|NP_438171.1| coronin-2A [Homo sapiens].
          Length = 525

 Score =  346 bits (887), Expect = 3e-95
 Identities = 163/338 (48%), Positives = 233/338 (68%), Gaps = 5/338 (1%)
 Frame = +2

Query: 119  RQSKFRHVFGQPVKNDQCYEDIRVSRVTWDSTFCAVNPKFLAVIVEASGGGAFLVLPLSK 298
            R SKFRHVFG+P   + CY+ + ++R   D+ FCAVNP F+AV+ E +GGGAFLV+PL +
Sbjct: 8    RSSKFRHVFGKPASKENCYDSVPITRSVHDNHFCAVNPHFIAVVTECAGGGAFLVIPLHQ 67

Query: 299  TGRIDKAYPTVCGHTGPVLDIDWCPHNDEVIASGSEDCTVMVWQIPEHGLTSPLTEPVVV 478
            TG++D  YP VCGH G VLD+ W P +D  IAS SED T+ +W IP+  LT  LT     
Sbjct: 68   TGKLDPHYPKVCGHRGNVLDVKWNPFDDFEIASCSEDATIKIWSIPKQLLTRNLTAYRKE 127

Query: 479  LEGHTKRVGIITWHPTARNVLLSAGCDNVVLIWNVGTAEELYRLD----SLHPDLIYNIS 646
            L GH +RVG++ WHPTA N+L SAG D  V+IWN+ T E +        S H D+I ++S
Sbjct: 128  LVGHARRVGLVEWHPTAANILFSAGYDYKVMIWNLDTKESVITSPMSTISCHQDVILSMS 187

Query: 647  WNRNGSLFCSACKDKSVRIIDPRRGTLVAEREKAHEGARPMRAIFLAD-GKVFTTGFSRM 823
            +N NGSL  + CKD+ +R+IDPR GT++  +E +++G R  + +FL +  K+ +TG SR 
Sbjct: 188  FNTNGSLLATTCKDRKIRVIDPRAGTVL--QEASYKGHRASKVLFLGNLKKLMSTGTSRW 245

Query: 824  SERQLALWDPENFGEPMALQELDSSNGALLPFYDPDTNVVYVCGKGDSSIRYFEITDESP 1003
            + RQ+ALWD +N   P+  ++LD S+G L PFYD DT+++YV GKGD +IRY+E++ + P
Sbjct: 246  NNRQVALWDQDNLSVPLMEEDLDGSSGVLFPFYDADTSMLYVVGKGDGNIRYYEVSADKP 305

Query: 1004 YIHFLNKFTSKEPQKGMGSMPQRGLEVNKWQIAPVYKL 1117
            ++ +L ++ S  PQKG+G MP+RGL+V+  +I   YKL
Sbjct: 306  HLSYLTEYRSYNPQKGIGVMPKRGLDVSSCEIFRFYKL 343


>ref|NP_006082.3| coronin-2B isoform 1 [Homo sapiens].
          Length = 480

 Score =  334 bits (856), Expect = 1e-91
 Identities = 161/340 (47%), Positives = 232/340 (68%), Gaps = 2/340 (0%)
 Frame = +2

Query: 104  FRKVVRQSKFRHVFGQPVKNDQCYEDIRVSRVTWDSTFCAVNPKFLAVIVEASGGGAFLV 283
            +R   R SKFR+V+G+    + C++ I +++   D+ FCAVN +FLA++ E++GGG+FLV
Sbjct: 8    WRPQYRSSKFRNVYGKVANREHCFDGIPITKNVHDNHFCAVNTRFLAIVTESAGGGSFLV 67

Query: 284  LPLSKTGRIDKAYPTVCGHTGPVLDIDWCPHNDEVIASGSEDCTVMVWQIPEHGLTSPLT 463
            +PL +TGRI+  YP VCGH G VLDI W P  D +IAS SED +V +W+IPE GL   +T
Sbjct: 68   IPLEQTGRIEPNYPKVCGHQGNVLDIKWNPFIDNIIASCSEDTSVRIWEIPEGGLKRNMT 127

Query: 464  EPVVVLEGHTKRVGIITWHPTARNVLLSAGCDNVVLIWNVGTAEELYRLDSLHPDLIYNI 643
            E ++ L GH++RVG++ WHPT  N+L SAG D  VLIWN+   E +  +D  H D+I  +
Sbjct: 128  EALLELHGHSRRVGLVEWHPTTNNILFSAGYDYKVLIWNLDVGEPVKMID-CHTDVILCM 186

Query: 644  SWNRNGSLFCSACKDKSVRIIDPRRGTLVAERE-KAHEGARPMRAIFLADGK-VFTTGFS 817
            S+N +GSL  + CKDK +R+I+PR G ++ E   K H   R  R +FL + K + TTG S
Sbjct: 187  SFNTDGSLLTTTCKDKKLRVIEPRSGRVLQEANCKNH---RVNRVVFLGNMKRLLTTGVS 243

Query: 818  RMSERQLALWDPENFGEPMALQELDSSNGALLPFYDPDTNVVYVCGKGDSSIRYFEITDE 997
            R + RQ+ALWD E+   P+  +E+D  +G L PFYD DT+++Y+ GKGD +IRY+EI+ E
Sbjct: 244  RWNTRQIALWDQEDLSMPLIEEEIDGLSGLLFPFYDADTHMLYLAGKGDGNIRYYEISTE 303

Query: 998  SPYIHFLNKFTSKEPQKGMGSMPQRGLEVNKWQIAPVYKL 1117
             PY+ +L +F S  PQKG+G MP+ GL+V+  ++   YKL
Sbjct: 304  KPYLSYLMEFRSPAPQKGLGVMPKHGLDVSACEVFRFYKL 343


>ref|NP_001177386.1| coronin-2B isoform 2 [Homo sapiens].
          Length = 475

 Score =  334 bits (856), Expect = 1e-91
 Identities = 161/340 (47%), Positives = 232/340 (68%), Gaps = 2/340 (0%)
 Frame = +2

Query: 104  FRKVVRQSKFRHVFGQPVKNDQCYEDIRVSRVTWDSTFCAVNPKFLAVIVEASGGGAFLV 283
            +R   R SKFR+V+G+    + C++ I +++   D+ FCAVN +FLA++ E++GGG+FLV
Sbjct: 3    WRPQYRSSKFRNVYGKVANREHCFDGIPITKNVHDNHFCAVNTRFLAIVTESAGGGSFLV 62

Query: 284  LPLSKTGRIDKAYPTVCGHTGPVLDIDWCPHNDEVIASGSEDCTVMVWQIPEHGLTSPLT 463
            +PL +TGRI+  YP VCGH G VLDI W P  D +IAS SED +V +W+IPE GL   +T
Sbjct: 63   IPLEQTGRIEPNYPKVCGHQGNVLDIKWNPFIDNIIASCSEDTSVRIWEIPEGGLKRNMT 122

Query: 464  EPVVVLEGHTKRVGIITWHPTARNVLLSAGCDNVVLIWNVGTAEELYRLDSLHPDLIYNI 643
            E ++ L GH++RVG++ WHPT  N+L SAG D  VLIWN+   E +  +D  H D+I  +
Sbjct: 123  EALLELHGHSRRVGLVEWHPTTNNILFSAGYDYKVLIWNLDVGEPVKMID-CHTDVILCM 181

Query: 644  SWNRNGSLFCSACKDKSVRIIDPRRGTLVAERE-KAHEGARPMRAIFLADGK-VFTTGFS 817
            S+N +GSL  + CKDK +R+I+PR G ++ E   K H   R  R +FL + K + TTG S
Sbjct: 182  SFNTDGSLLTTTCKDKKLRVIEPRSGRVLQEANCKNH---RVNRVVFLGNMKRLLTTGVS 238

Query: 818  RMSERQLALWDPENFGEPMALQELDSSNGALLPFYDPDTNVVYVCGKGDSSIRYFEITDE 997
            R + RQ+ALWD E+   P+  +E+D  +G L PFYD DT+++Y+ GKGD +IRY+EI+ E
Sbjct: 239  RWNTRQIALWDQEDLSMPLIEEEIDGLSGLLFPFYDADTHMLYLAGKGDGNIRYYEISTE 298

Query: 998  SPYIHFLNKFTSKEPQKGMGSMPQRGLEVNKWQIAPVYKL 1117
             PY+ +L +F S  PQKG+G MP+ GL+V+  ++   YKL
Sbjct: 299  KPYLSYLMEFRSPAPQKGLGVMPKHGLDVSACEVFRFYKL 338


  Database: RefSeq49_HP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,297,164
  Number of sequences in database:  32,964
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 43,539,192
Number of extensions: 1251386
Number of successful extensions: 6372
Number of sequences better than 1.0e-05: 57
Number of HSP's gapped: 6083
Number of HSP's successfully gapped: 85
Length of query: 374
Length of database: 18,297,164
Length adjustment: 104
Effective length of query: 270
Effective length of database: 14,868,908
Effective search space: 4014605160
Effective search space used: 4014605160
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-002701
         (1122 letters)

Database: RefSeq49_MP.fasta 
           30,036 sequences; 15,617,559 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_035908.1| coronin-1B [Mus musculus].                           672   0.0  
Alignment   gi|NP_035909.2| coronin-1C [Mus musculus].                           594   e-170
Alignment   gi|NP_624354.1| coronin-6 isoform A [Mus musculus].                  541   e-154
Alignment   gi|NP_624356.1| coronin-6 isoform B [Mus musculus].                  532   e-151
Alignment   gi|NP_034028.1| coronin-1A [Mus musculus].                           531   e-151
Alignment   gi|NP_624355.1| coronin-6 isoform C [Mus musculus].                  455   e-128
Alignment   gi|NP_001158276.1| coronin-2A [Mus musculus].                        340   1e-93
Alignment   gi|NP_849224.1| coronin-2A [Mus musculus].                           340   1e-93
Alignment   gi|NP_780693.2| coronin-2B [Mus musculus].                           334   8e-92
Alignment   gi|NP_084481.3| coronin-7 [Mus musculus].                            192   3e-49

>ref|NP_035908.1| coronin-1B [Mus musculus].
          Length = 484

 Score =  672 bits (1735), Expect = 0.0
 Identities = 322/339 (94%), Positives = 331/339 (97%)
 Frame = +2

Query: 104  FRKVVRQSKFRHVFGQPVKNDQCYEDIRVSRVTWDSTFCAVNPKFLAVIVEASGGGAFLV 283
            FRKVVRQSKFRHVFGQPVKNDQCYEDIRVSRVTWDSTFCAVNPKFLAVIVEASGGGAF+V
Sbjct: 3    FRKVVRQSKFRHVFGQPVKNDQCYEDIRVSRVTWDSTFCAVNPKFLAVIVEASGGGAFMV 62

Query: 284  LPLSKTGRIDKAYPTVCGHTGPVLDIDWCPHNDEVIASGSEDCTVMVWQIPEHGLTSPLT 463
            LPL+KTGRIDKAYPTVCGHTGPVLDIDWCPHNDEVIASGSEDCTVMVWQIPE+GLTSPLT
Sbjct: 63   LPLNKTGRIDKAYPTVCGHTGPVLDIDWCPHNDEVIASGSEDCTVMVWQIPENGLTSPLT 122

Query: 464  EPVVVLEGHTKRVGIITWHPTARNVLLSAGCDNVVLIWNVGTAEELYRLDSLHPDLIYNI 643
            EPVVVLEGHTKRVGIITWHPTARNVLLSAGCDNVVLIWNVGTAEELYRLDSLHPDLIYN+
Sbjct: 123  EPVVVLEGHTKRVGIITWHPTARNVLLSAGCDNVVLIWNVGTAEELYRLDSLHPDLIYNV 182

Query: 644  SWNRNGSLFCSACKDKSVRIIDPRRGTLVAEREKAHEGARPMRAIFLADGKVFTTGFSRM 823
            SWN NGSLFCSACKDKSVRIIDPRRGTLVAEREKAHEGARPMRAIFLADGKVFTTGFSRM
Sbjct: 183  SWNHNGSLFCSACKDKSVRIIDPRRGTLVAEREKAHEGARPMRAIFLADGKVFTTGFSRM 242

Query: 824  SERQLALWDPENFGEPMALQELDSSNGALLPFYDPDTNVVYVCGKGDSSIRYFEITDESP 1003
            SERQLALWDPEN  EPMALQELDSSNGALLPFYDPDT+VVYVCGKGDSSIRYFEITDE P
Sbjct: 243  SERQLALWDPENLEEPMALQELDSSNGALLPFYDPDTSVVYVCGKGDSSIRYFEITDEPP 302

Query: 1004 YIHFLNKFTSKEPQKGMGSMPQRGLEVNKWQIAPVYKLH 1120
            YIHFLN FTSKEPQ+GMGSMP+RGLEV+K +IA  YKLH
Sbjct: 303  YIHFLNTFTSKEPQRGMGSMPKRGLEVSKCEIARFYKLH 341


>ref|NP_035909.2| coronin-1C [Mus musculus].
          Length = 474

 Score =  594 bits (1532), Expect = e-170
 Identities = 270/338 (79%), Positives = 311/338 (92%)
 Frame = +2

Query: 107  RKVVRQSKFRHVFGQPVKNDQCYEDIRVSRVTWDSTFCAVNPKFLAVIVEASGGGAFLVL 286
            R+VVRQSKFRHVFGQ VKNDQCY+DIRVSRVTWDS+FCAVNP+F+A+I+EASGGGAFLVL
Sbjct: 2    RRVVRQSKFRHVFGQAVKNDQCYDDIRVSRVTWDSSFCAVNPRFVAIIIEASGGGAFLVL 61

Query: 287  PLSKTGRIDKAYPTVCGHTGPVLDIDWCPHNDEVIASGSEDCTVMVWQIPEHGLTSPLTE 466
            PL KTGRIDK+YPTVCGHTGPVLDIDWCPHND+VIASGSEDCTVMVWQIPE+GLT  LTE
Sbjct: 62   PLHKTGRIDKSYPTVCGHTGPVLDIDWCPHNDQVIASGSEDCTVMVWQIPENGLTLSLTE 121

Query: 467  PVVVLEGHTKRVGIITWHPTARNVLLSAGCDNVVLIWNVGTAEELYRLDSLHPDLIYNIS 646
            PVV+LEGH+KRVGI+ WHPTARNVLLSAGCDN ++IWNVGT E L  LD +H D+IYN+S
Sbjct: 122  PVVILEGHSKRVGIVAWHPTARNVLLSAGCDNAIIIWNVGTGEALINLDDMHSDMIYNVS 181

Query: 647  WNRNGSLFCSACKDKSVRIIDPRRGTLVAEREKAHEGARPMRAIFLADGKVFTTGFSRMS 826
            W+RNGSL C+A KDK VR+IDPR+  +VAE+EKAHEGARPMRAIFLADG VFTTGFSRMS
Sbjct: 182  WSRNGSLICTASKDKKVRVIDPRKQEIVAEKEKAHEGARPMRAIFLADGNVFTTGFSRMS 241

Query: 827  ERQLALWDPENFGEPMALQELDSSNGALLPFYDPDTNVVYVCGKGDSSIRYFEITDESPY 1006
            ERQLALW+P+N  EP+AL E+D+SNG LLPFYDPDT+++Y+CGKGDSSIRYFEITDESPY
Sbjct: 242  ERQLALWNPKNMQEPIALHEMDTSNGVLLPFYDPDTSIIYLCGKGDSSIRYFEITDESPY 301

Query: 1007 IHFLNKFTSKEPQKGMGSMPQRGLEVNKWQIAPVYKLH 1120
            +H+LN F+SKEPQ+GMG MP+RGL+VNK +IA  +KLH
Sbjct: 302  VHYLNTFSSKEPQRGMGYMPKRGLDVNKCEIARFFKLH 339


>ref|NP_624354.1| coronin-6 isoform A [Mus musculus].
          Length = 471

 Score =  541 bits (1395), Expect = e-154
 Identities = 247/340 (72%), Positives = 295/340 (86%)
 Frame = +2

Query: 101  MFRKVVRQSKFRHVFGQPVKNDQCYEDIRVSRVTWDSTFCAVNPKFLAVIVEASGGGAFL 280
            M R+VVRQSKFRHVFGQ  K DQ YEDIRVS+VTWDS FCAVNPKFLA+IVEA GGGAF+
Sbjct: 1    MSRRVVRQSKFRHVFGQAAKADQAYEDIRVSKVTWDSAFCAVNPKFLAIIVEAGGGGAFI 60

Query: 281  VLPLSKTGRIDKAYPTVCGHTGPVLDIDWCPHNDEVIASGSEDCTVMVWQIPEHGLTSPL 460
            VLPL+KTGR+DK YP V GHTGPVLDIDWCPHND VIAS S+D TVMVWQIP++     +
Sbjct: 61   VLPLAKTGRVDKNYPLVTGHTGPVLDIDWCPHNDNVIASASDDTTVMVWQIPDYTPVRNI 120

Query: 461  TEPVVVLEGHTKRVGIITWHPTARNVLLSAGCDNVVLIWNVGTAEELYRLDSLHPDLIYN 640
            TEPV+ LEGH+KRVGI++WHPTARNVLLSAG DNV++IWNVGT E L  LD +HPD+I++
Sbjct: 121  TEPVITLEGHSKRVGILSWHPTARNVLLSAGGDNVIIIWNVGTGEVLLSLDDIHPDVIHS 180

Query: 641  ISWNRNGSLFCSACKDKSVRIIDPRRGTLVAEREKAHEGARPMRAIFLADGKVFTTGFSR 820
            + WN NGSL  + CKDK++RIIDPR+  +VAER + HEGARP+RA+F ADGK+ +TGFSR
Sbjct: 181  VCWNSNGSLLATTCKDKTLRIIDPRKSQVVAERARPHEGARPLRAVFTADGKLLSTGFSR 240

Query: 821  MSERQLALWDPENFGEPMALQELDSSNGALLPFYDPDTNVVYVCGKGDSSIRYFEITDES 1000
            MSERQLALWDP NF EP+ALQE+D+SNG LLPFYDPD+++VY+CGKGDSSIRYFEIT+E 
Sbjct: 241  MSERQLALWDPNNFEEPVALQEMDTSNGVLLPFYDPDSSIVYLCGKGDSSIRYFEITEEP 300

Query: 1001 PYIHFLNKFTSKEPQKGMGSMPQRGLEVNKWQIAPVYKLH 1120
            P++H+LN F+SKEPQ+GMG MP+RGL+V+K +IA  YKLH
Sbjct: 301  PFVHYLNTFSSKEPQRGMGFMPKRGLDVSKCEIARFYKLH 340


>ref|NP_624356.1| coronin-6 isoform B [Mus musculus].
          Length = 471

 Score =  532 bits (1371), Expect = e-151
 Identities = 243/340 (71%), Positives = 291/340 (85%)
 Frame = +2

Query: 101  MFRKVVRQSKFRHVFGQPVKNDQCYEDIRVSRVTWDSTFCAVNPKFLAVIVEASGGGAFL 280
            M R+VVRQSKFRHVFGQ  K DQ YEDIRVS+VTWDS FCAVNPKFLA+IVEA GGGAF+
Sbjct: 1    MSRRVVRQSKFRHVFGQAAKADQAYEDIRVSKVTWDSAFCAVNPKFLAIIVEAGGGGAFI 60

Query: 281  VLPLSKTGRIDKAYPTVCGHTGPVLDIDWCPHNDEVIASGSEDCTVMVWQIPEHGLTSPL 460
            VLPL+KTGR+DK YP V GHTGPVLDIDWCPHND VIAS S+D TVMVWQIP++     +
Sbjct: 61   VLPLAKTGRVDKNYPLVTGHTGPVLDIDWCPHNDNVIASASDDTTVMVWQIPDYTPVRNI 120

Query: 461  TEPVVVLEGHTKRVGIITWHPTARNVLLSAGCDNVVLIWNVGTAEELYRLDSLHPDLIYN 640
            TEPV+ LEGH+KRVGI++WHPTARNVLLSAG DNV++IWNVGT E L  LD +HPD+I++
Sbjct: 121  TEPVITLEGHSKRVGILSWHPTARNVLLSAGGDNVIIIWNVGTGEVLLSLDDIHPDVIHS 180

Query: 641  ISWNRNGSLFCSACKDKSVRIIDPRRGTLVAEREKAHEGARPMRAIFLADGKVFTTGFSR 820
            + WN NGSL  + CKDK++RIIDPR+  +VAER  AHEG RPMRA+F   G +FTTGF+R
Sbjct: 181  VCWNSNGSLLATTCKDKTLRIIDPRKSQVVAERFAAHEGMRPMRAVFTRLGHIFTTGFTR 240

Query: 821  MSERQLALWDPENFGEPMALQELDSSNGALLPFYDPDTNVVYVCGKGDSSIRYFEITDES 1000
            MS+R+L LWDP NF EP+ALQE+D+SNG LLPFYDPD+++VY+CGKGDSSIRYFEIT+E 
Sbjct: 241  MSQRELGLWDPNNFEEPVALQEMDTSNGVLLPFYDPDSSIVYLCGKGDSSIRYFEITEEP 300

Query: 1001 PYIHFLNKFTSKEPQKGMGSMPQRGLEVNKWQIAPVYKLH 1120
            P++H+LN F+SKEPQ+GMG MP+RGL+V+K +IA  YKLH
Sbjct: 301  PFVHYLNTFSSKEPQRGMGFMPKRGLDVSKCEIARFYKLH 340


>ref|NP_034028.1| coronin-1A [Mus musculus].
          Length = 461

 Score =  531 bits (1369), Expect = e-151
 Identities = 238/341 (69%), Positives = 294/341 (86%), Gaps = 1/341 (0%)
 Frame = +2

Query: 101  MFRKVVRQSKFRHVFGQPVKNDQCYEDIRVSRVTWDSTFCAVNPKFLAVIVEASGGGAFL 280
            M R+VVR SKFRHVFGQP K DQCYED+RVS+ TWDS FCAVNPKF+A+I EASGGGAFL
Sbjct: 1    MSRQVVRSSKFRHVFGQPAKADQCYEDVRVSQTTWDSGFCAVNPKFMALICEASGGGAFL 60

Query: 281  VLPLSKTGRIDKAYPTVCGHTGPVLDIDWCPHNDEVIASGSEDCTVMVWQIPEHGLTSPL 460
            VLPL KTGR+DK  P VCGHT PVLDI WCPHND VIASGSEDCTVMVW+IP+ GL  PL
Sbjct: 61   VLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPL 120

Query: 461  TEPVVVLEGHTKRVGIITWHPTARNVLLSAGCDNVVLIWNVGTAEELYRL-DSLHPDLIY 637
             EPV+ LEGHTKRVGI+ WHPTA+NVLLSAGCDNV+L+W+VGT   +  L   +HPD IY
Sbjct: 121  REPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIY 180

Query: 638  NISWNRNGSLFCSACKDKSVRIIDPRRGTLVAEREKAHEGARPMRAIFLADGKVFTTGFS 817
            ++ W+R+G+L C++C+DK VR+I+PR+GT+VAE+++ HEG RP+ A+F+++GK+ TTGFS
Sbjct: 181  SVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFS 240

Query: 818  RMSERQLALWDPENFGEPMALQELDSSNGALLPFYDPDTNVVYVCGKGDSSIRYFEITDE 997
            RMSERQ+ALWD ++  EP++LQELD+S+G LLPF+DPDTN+VY+CGKGDSSIRYFEIT E
Sbjct: 241  RMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSE 300

Query: 998  SPYIHFLNKFTSKEPQKGMGSMPQRGLEVNKWQIAPVYKLH 1120
            +P++H+L+ F+SKE Q+GMG MP+RGLEVNK +IA  YKLH
Sbjct: 301  APFLHYLSMFSSKESQRGMGYMPKRGLEVNKCEIARFYKLH 341


>ref|NP_624355.1| coronin-6 isoform C [Mus musculus].
          Length = 431

 Score =  455 bits (1171), Expect = e-128
 Identities = 216/340 (63%), Positives = 259/340 (76%)
 Frame = +2

Query: 101  MFRKVVRQSKFRHVFGQPVKNDQCYEDIRVSRVTWDSTFCAVNPKFLAVIVEASGGGAFL 280
            M R+VVRQSKFRHVFGQ  K DQ YEDIRVS+VTWDS FCAVNPKFLA+IVEA GGGAF+
Sbjct: 1    MSRRVVRQSKFRHVFGQAAKADQAYEDIRVSKVTWDSAFCAVNPKFLAIIVEAGGGGAFI 60

Query: 281  VLPLSKTGRIDKAYPTVCGHTGPVLDIDWCPHNDEVIASGSEDCTVMVWQIPEHGLTSPL 460
            VLPL+KTGR+DK YP V GHTGPVLDIDWCPHND VIAS S+D TVMVWQIP++     +
Sbjct: 61   VLPLAKTGRVDKNYPLVTGHTGPVLDIDWCPHNDNVIASASDDTTVMVWQIPDYTPVRNI 120

Query: 461  TEPVVVLEGHTKRVGIITWHPTARNVLLSAGCDNVVLIWNVGTAEELYRLDSLHPDLIYN 640
            TEPV+ LEGH+KRVGI++WHPTARNVLLSAG DNV++IWNVGT E L  LD +HPD+I++
Sbjct: 121  TEPVITLEGHSKRVGILSWHPTARNVLLSAGGDNVIIIWNVGTGEVLLSLDDIHPDVIHS 180

Query: 641  ISWNRNGSLFCSACKDKSVRIIDPRRGTLVAEREKAHEGARPMRAIFLADGKVFTTGFSR 820
            + WN NGSL  + CKDK++RIIDPR+  +VA                             
Sbjct: 181  VCWNSNGSLLATTCKDKTLRIIDPRKSQVVA----------------------------- 211

Query: 821  MSERQLALWDPENFGEPMALQELDSSNGALLPFYDPDTNVVYVCGKGDSSIRYFEITDES 1000
                        NF EP+ALQE+D+SNG LLPFYDPD+++VY+CGKGDSSIRYFEIT+E 
Sbjct: 212  -----------NNFEEPVALQEMDTSNGVLLPFYDPDSSIVYLCGKGDSSIRYFEITEEP 260

Query: 1001 PYIHFLNKFTSKEPQKGMGSMPQRGLEVNKWQIAPVYKLH 1120
            P++H+LN F+SKEPQ+GMG MP+RGL+V+K +IA  YKLH
Sbjct: 261  PFVHYLNTFSSKEPQRGMGFMPKRGLDVSKCEIARFYKLH 300


>ref|NP_001158276.1| coronin-2A [Mus musculus].
          Length = 524

 Score =  340 bits (872), Expect = 1e-93
 Identities = 159/338 (47%), Positives = 231/338 (68%), Gaps = 5/338 (1%)
 Frame = +2

Query: 119  RQSKFRHVFGQPVKNDQCYEDIRVSRVTWDSTFCAVNPKFLAVIVEASGGGAFLVLPLSK 298
            R SKFRHV+G+P   + CY+ + ++R   D+ FCAVNP F+AV+ E +GGGAFLV+PL +
Sbjct: 8    RSSKFRHVYGKPASKENCYDSVPITRSVHDNHFCAVNPHFIAVVTECAGGGAFLVIPLHQ 67

Query: 299  TGRIDKAYPTVCGHTGPVLDIDWCPHNDEVIASGSEDCTVMVWQIPEHGLTSPLTEPVVV 478
            TG++D  YP VCGH G VLDI W P ND  IAS SED T+ +W IP+  LT  LT     
Sbjct: 68   TGKLDPHYPKVCGHRGNVLDIKWNPFNDFEIASCSEDATIKIWNIPKQLLTRNLTTYRKE 127

Query: 479  LEGHTKRVGIITWHPTARNVLLSAGCDNVVLIWNVGTAEEL----YRLDSLHPDLIYNIS 646
            L GH +RVG++ WHPT  N+L SAG D  V++WN+ T + +     +  + H D+I ++S
Sbjct: 128  LIGHARRVGLVEWHPTTANILFSAGYDYKVMVWNLDTKDSVIAGPVKTINCHQDVILSMS 187

Query: 647  WNRNGSLFCSACKDKSVRIIDPRRGTLVAEREKAHEGARPMRAIFLAD-GKVFTTGFSRM 823
            +N NGSL  + CKD+ +RI+DPR G ++  +E +++G R  + +FL    K+ +TG SR 
Sbjct: 188  FNTNGSLLATTCKDRKIRIVDPRLGIVL--QEASYKGHRANKVLFLGSLKKLLSTGTSRW 245

Query: 824  SERQLALWDPENFGEPMALQELDSSNGALLPFYDPDTNVVYVCGKGDSSIRYFEITDESP 1003
            + RQ+ALWD EN   P+  ++LD S+G L PF+D DT+++Y+ GKGD +IRY+E++ E P
Sbjct: 246  NNRQMALWDQENLSVPLTEEDLDGSSGVLFPFFDSDTSMLYIVGKGDGNIRYYEVSMEKP 305

Query: 1004 YIHFLNKFTSKEPQKGMGSMPQRGLEVNKWQIAPVYKL 1117
            ++ +L ++ S  PQKG+G MP+RGL+V+  +I   YKL
Sbjct: 306  HLTYLTEYRSYNPQKGIGIMPKRGLDVSSCEIFRFYKL 343


>ref|NP_849224.1| coronin-2A [Mus musculus].
          Length = 524

 Score =  340 bits (872), Expect = 1e-93
 Identities = 159/338 (47%), Positives = 231/338 (68%), Gaps = 5/338 (1%)
 Frame = +2

Query: 119  RQSKFRHVFGQPVKNDQCYEDIRVSRVTWDSTFCAVNPKFLAVIVEASGGGAFLVLPLSK 298
            R SKFRHV+G+P   + CY+ + ++R   D+ FCAVNP F+AV+ E +GGGAFLV+PL +
Sbjct: 8    RSSKFRHVYGKPASKENCYDSVPITRSVHDNHFCAVNPHFIAVVTECAGGGAFLVIPLHQ 67

Query: 299  TGRIDKAYPTVCGHTGPVLDIDWCPHNDEVIASGSEDCTVMVWQIPEHGLTSPLTEPVVV 478
            TG++D  YP VCGH G VLDI W P ND  IAS SED T+ +W IP+  LT  LT     
Sbjct: 68   TGKLDPHYPKVCGHRGNVLDIKWNPFNDFEIASCSEDATIKIWNIPKQLLTRNLTTYRKE 127

Query: 479  LEGHTKRVGIITWHPTARNVLLSAGCDNVVLIWNVGTAEEL----YRLDSLHPDLIYNIS 646
            L GH +RVG++ WHPT  N+L SAG D  V++WN+ T + +     +  + H D+I ++S
Sbjct: 128  LIGHARRVGLVEWHPTTANILFSAGYDYKVMVWNLDTKDSVIAGPVKTINCHQDVILSMS 187

Query: 647  WNRNGSLFCSACKDKSVRIIDPRRGTLVAEREKAHEGARPMRAIFLAD-GKVFTTGFSRM 823
            +N NGSL  + CKD+ +RI+DPR G ++  +E +++G R  + +FL    K+ +TG SR 
Sbjct: 188  FNTNGSLLATTCKDRKIRIVDPRLGIVL--QEASYKGHRANKVLFLGSLKKLLSTGTSRW 245

Query: 824  SERQLALWDPENFGEPMALQELDSSNGALLPFYDPDTNVVYVCGKGDSSIRYFEITDESP 1003
            + RQ+ALWD EN   P+  ++LD S+G L PF+D DT+++Y+ GKGD +IRY+E++ E P
Sbjct: 246  NNRQMALWDQENLSVPLTEEDLDGSSGVLFPFFDSDTSMLYIVGKGDGNIRYYEVSMEKP 305

Query: 1004 YIHFLNKFTSKEPQKGMGSMPQRGLEVNKWQIAPVYKL 1117
            ++ +L ++ S  PQKG+G MP+RGL+V+  +I   YKL
Sbjct: 306  HLTYLTEYRSYNPQKGIGIMPKRGLDVSSCEIFRFYKL 343


>ref|NP_780693.2| coronin-2B [Mus musculus].
          Length = 480

 Score =  334 bits (856), Expect = 8e-92
 Identities = 161/340 (47%), Positives = 232/340 (68%), Gaps = 2/340 (0%)
 Frame = +2

Query: 104  FRKVVRQSKFRHVFGQPVKNDQCYEDIRVSRVTWDSTFCAVNPKFLAVIVEASGGGAFLV 283
            +R   R SKFR+V+G+    + C++ I +++   D+ FCAVN +FLA++ E++GGG+FLV
Sbjct: 8    WRPQYRSSKFRNVYGKAANREHCFDGIPITKNVHDNHFCAVNARFLAIVTESAGGGSFLV 67

Query: 284  LPLSKTGRIDKAYPTVCGHTGPVLDIDWCPHNDEVIASGSEDCTVMVWQIPEHGLTSPLT 463
            +PL +TGRI+  YP VCGH G VLDI W P  D +IAS SED +V +W+IP+ GL   +T
Sbjct: 68   IPLEQTGRIEPNYPKVCGHQGNVLDIKWNPFIDNIIASCSEDTSVRIWEIPDGGLKRNMT 127

Query: 464  EPVVVLEGHTKRVGIITWHPTARNVLLSAGCDNVVLIWNVGTAEELYRLDSLHPDLIYNI 643
            E ++ L GH++RVG++ WHPT  N+L SAG D  VLIWN+   E +  +D  H D+I  +
Sbjct: 128  EALLELHGHSRRVGLVEWHPTTNNILFSAGYDYKVLIWNLDIGEPVKMID-CHTDVILCM 186

Query: 644  SWNRNGSLFCSACKDKSVRIIDPRRGTLVAERE-KAHEGARPMRAIFLADGK-VFTTGFS 817
            S+N +GSL  + CKDK +R+I+PR G ++ E   K H   R  R +FL + K + TTG S
Sbjct: 187  SFNTDGSLLTTTCKDKKLRVIEPRSGRVLQEANCKNH---RVNRVVFLGNMKRLLTTGVS 243

Query: 818  RMSERQLALWDPENFGEPMALQELDSSNGALLPFYDPDTNVVYVCGKGDSSIRYFEITDE 997
            R + RQ+ALWD E+   PM  +E+D  +G L PFYD DT+++Y+ GKGD +IRY+EI+ E
Sbjct: 244  RWNTRQIALWDQEDLSMPMIEEEIDGLSGLLFPFYDADTHMLYLAGKGDGNIRYYEISTE 303

Query: 998  SPYIHFLNKFTSKEPQKGMGSMPQRGLEVNKWQIAPVYKL 1117
             PY+ +L +F S  PQKG+G MP+ GL+V+  ++   YKL
Sbjct: 304  KPYLSYLMEFRSPAPQKGLGVMPKHGLDVSACEVFRFYKL 343


>ref|NP_084481.3| coronin-7 [Mus musculus].
          Length = 922

 Score =  192 bits (489), Expect = 3e-49
 Identities = 115/337 (34%), Positives = 178/337 (52%), Gaps = 6/337 (1%)
 Frame = +2

Query: 125  SKFRHVFGQPVKNDQCYEDIRVSRVTWDST---FCAVNPKFLAVIVEASGGGAFLVLPLS 295
            SKFRH  G  +  D    +++   +T       FCA   +    ++  S GG   VL L 
Sbjct: 468  SKFRHTQGSLLHRDSHITNLKGLNLTTPGESDGFCANRLRVAVPLL--SSGGQVAVLELQ 525

Query: 296  KTGRI-DKAYPTVCGHTGPVLDIDWCPHNDEVIASGSEDCTVMVWQIPEHGLTSPLTEPV 472
            K GR+ D A PT+   T  V+D+ W P +   +A   ED  + +W++P  GL + LT P 
Sbjct: 526  KPGRLPDTALPTLQNGTA-VMDLVWDPFDPHRLAVAGEDARIRLWRVPPGGLENVLTTPE 584

Query: 473  VVLEGHTKRVGIITWHPTARNVLLSAGCDNVVLIWNVGTAEELYRLDSLHPDLIYNISWN 652
             VL GHT+++  + +HP A +VL S+  D  V IW++ T  E  +L   H D I++++W+
Sbjct: 585  TVLTGHTEKIYSLRFHPLAADVLASSSYDLTVRIWDLQTGAERLKLQG-HQDQIFSLAWS 643

Query: 653  RNGSLFCSACKDKSVRIIDPRRGTLVAEREKAHEGARPMRAIFLADGK-VFTTGFSRMSE 829
             +G    + CKD  VR+ +PR   L  +     EG R  R +++ DG  +  +GF   SE
Sbjct: 644  PDGKQLATVCKDGHVRVYEPRSSPLPLQEGPGPEGGRGARIVWVCDGGCLLVSGFDSRSE 703

Query: 830  RQLALWDPENFGE-PMALQELDSSNGALLPFYDPDTNVVYVCGKGDSSIRYFEITDESPY 1006
            RQL L+  +   + P AL  LD +   LLP YDPDT +V + GKGD+ +  +E+  E+P+
Sbjct: 704  RQLQLYIADALAQGPSALLGLDVAPSTLLPSYDPDTGLVLLTGKGDTRVFLYEVLPEAPF 763

Query: 1007 IHFLNKFTSKEPQKGMGSMPQRGLEVNKWQIAPVYKL 1117
                N FTS +P KG   +P+   ++   + A   +L
Sbjct: 764  FLECNSFTSPDPHKGFVLLPKTECDIQDVEFARCLRL 800



 Score =  166 bits (419), Expect = 4e-41
 Identities = 103/333 (30%), Positives = 175/333 (52%), Gaps = 2/333 (0%)
 Frame = +2

Query: 125  SKFRHVFGQPVKNDQCYEDIRVSRVTWDSTFCAVNPKFLAVIVEASGGGAFLVLPLSKTG 304
            SKFRH+  +P + +    DIR   VT  +    +      +   +   G   V+ L    
Sbjct: 7    SKFRHMEARPSRREAWISDIRA--VTTPTCGNHIKSSCSLIAFNSDRPGVLGVISLEGHE 64

Query: 305  RIDKAYPTVCG-HTGPVLDIDWCPHNDEVIASGSEDCTVMVWQIPEHGLTSPLTEPVVVL 481
              +K + T  G H+  V D+D+ P +D ++ASGS D T+ +W++   G   P + P VVL
Sbjct: 65   E-NKRHVTYLGCHSDLVTDLDFSPFDDFLLASGSADRTIKLWRLSGTGEALP-SVPGVVL 122

Query: 482  EGHTKRVGIITWHPTARNVLLSAGCDNVVLIWNVGTAEELYRLDSLHPDLIYNISWNRNG 661
                  V ++ +HPT   VL+S      V +W+V   + L  L++ H DL+ +  W+R+G
Sbjct: 123  GPEELPVEVLQFHPTVDGVLVSTA-GKTVKVWDVAKQQPLTELEA-HKDLVQSAVWSRDG 180

Query: 662  SLFCSACKDKSVRIIDPRRGTLVAEREKAHEGARPMRAIFLA-DGKVFTTGFSRMSERQL 838
            ++  +ACKDK +RI DPR  T  ++  +AHE  R +R  +      + +TGF++M ER+ 
Sbjct: 181  AIVGTACKDKQLRIFDPRARTQASQSTQAHENNRDIRLAWTGIQEHLVSTGFNQMREREA 240

Query: 839  ALWDPENFGEPMALQELDSSNGALLPFYDPDTNVVYVCGKGDSSIRYFEITDESPYIHFL 1018
             LWD   F   +A   LD+S G L+P  DPD+ ++ + GKG++ +  +E+T + P +  +
Sbjct: 241  KLWDTRLFSSALASVTLDTSPGPLIPLLDPDSGLLVLAGKGENQLYCYEVTPQQPALSPV 300

Query: 1019 NKFTSKEPQKGMGSMPQRGLEVNKWQIAPVYKL 1117
             +   +   +G   +P+R L V   ++  V +L
Sbjct: 301  TQCILENVLRGAALVPRRALAVMSCEVLQVLQL 333


  Database: RefSeq49_MP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 15,617,559
  Number of sequences in database:  30,036
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 36,661,693
Number of extensions: 1034275
Number of successful extensions: 5153
Number of sequences better than 1.0e-05: 40
Number of HSP's gapped: 4926
Number of HSP's successfully gapped: 59
Length of query: 374
Length of database: 15,617,559
Length adjustment: 103
Effective length of query: 271
Effective length of database: 12,523,851
Effective search space: 3393963621
Effective search space used: 3393963621
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-002701
         (1122 letters)

Database: RefSeq49_SP.fasta 
           24,897 sequences; 11,343,932 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_003122508.2| PREDICTED: coronin-1B-like [Sus scrofa].          688   0.0  
Alignment   gi|XP_001929380.1| PREDICTED: coronin-1C [Sus scrofa].               593   e-170
Alignment   gi|XP_003122082.1| PREDICTED: coronin-2A-like [Sus scrofa].          349   1e-96
Alignment   gi|XP_003121805.1| PREDICTED: coronin-2B [Sus scrofa].               334   6e-92
Alignment   gi|XP_003361333.1| PREDICTED: coronin-6-like [Sus scrofa].           328   3e-90
Alignment   gi|XP_003362227.1| PREDICTED: coronin-1C-like, partial [Sus scr...   311   3e-85
Alignment   gi|XP_003360880.1| PREDICTED: LOW QUALITY PROTEIN: coronin-1A-l...   250   9e-67
Alignment   gi|XP_003359180.1| PREDICTED: hypothetical protein LOC100620779...   211   8e-55
Alignment   gi|XP_003131831.2| PREDICTED: coronin-6-like [Sus scrofa].           204   7e-53
Alignment   gi|XP_003124691.2| PREDICTED: coronin-7-like [Sus scrofa].           191   8e-49

>ref|XP_003122508.2| PREDICTED: coronin-1B-like [Sus scrofa].
          Length = 469

 Score =  688 bits (1775), Expect = 0.0
 Identities = 331/340 (97%), Positives = 335/340 (98%)
 Frame = +2

Query: 101  MFRKVVRQSKFRHVFGQPVKNDQCYEDIRVSRVTWDSTFCAVNPKFLAVIVEASGGGAFL 280
            MFRKVVRQSKFRHVFGQPVKNDQCYEDIRVSRVTWDSTFCAVNPKFLAVIVEASGGGAFL
Sbjct: 1    MFRKVVRQSKFRHVFGQPVKNDQCYEDIRVSRVTWDSTFCAVNPKFLAVIVEASGGGAFL 60

Query: 281  VLPLSKTGRIDKAYPTVCGHTGPVLDIDWCPHNDEVIASGSEDCTVMVWQIPEHGLTSPL 460
            VLPLSKTGRIDKAYPTVCGHTGPVLDIDWCPHNDEVIASGSEDCTVMVWQIPEHGLTSPL
Sbjct: 61   VLPLSKTGRIDKAYPTVCGHTGPVLDIDWCPHNDEVIASGSEDCTVMVWQIPEHGLTSPL 120

Query: 461  TEPVVVLEGHTKRVGIITWHPTARNVLLSAGCDNVVLIWNVGTAEELYRLDSLHPDLIYN 640
            TEPVVVLEGHTKRVGIITWHPTARNVLLSAGCDNVVLIWNVGTAEELYRLDSLHPDLIYN
Sbjct: 121  TEPVVVLEGHTKRVGIITWHPTARNVLLSAGCDNVVLIWNVGTAEELYRLDSLHPDLIYN 180

Query: 641  ISWNRNGSLFCSACKDKSVRIIDPRRGTLVAEREKAHEGARPMRAIFLADGKVFTTGFSR 820
            ISWNRNGSLFCSACKDKSVRIIDPRRGTLVAEREKAHEGARPMRAIFLADGKVFTTGFSR
Sbjct: 181  ISWNRNGSLFCSACKDKSVRIIDPRRGTLVAEREKAHEGARPMRAIFLADGKVFTTGFSR 240

Query: 821  MSERQLALWDPENFGEPMALQELDSSNGALLPFYDPDTNVVYVCGKGDSSIRYFEITDES 1000
            MSERQLALWDP NFGEPMALQELDSSNGALLPFYDPDTNVVYVCGKGDSSIRYFEITDES
Sbjct: 241  MSERQLALWDPVNFGEPMALQELDSSNGALLPFYDPDTNVVYVCGKGDSSIRYFEITDES 300

Query: 1001 PYIHFLNKFTSKEPQKGMGSMPQRGLEVNKWQIAPVYKLH 1120
            PYIHFLN FTSKEPQ+GMGSMP+RGLEV+K +IA  YKLH
Sbjct: 301  PYIHFLNTFTSKEPQRGMGSMPKRGLEVSKCEIARFYKLH 340


>ref|XP_001929380.1| PREDICTED: coronin-1C [Sus scrofa].
          Length = 474

 Score =  593 bits (1530), Expect = e-170
 Identities = 269/338 (79%), Positives = 310/338 (91%)
 Frame = +2

Query: 107  RKVVRQSKFRHVFGQPVKNDQCYEDIRVSRVTWDSTFCAVNPKFLAVIVEASGGGAFLVL 286
            R+VVRQSKFRHVFGQ VKNDQCY+DIRVSRVTWDS+FCAVNP+F+A+I+EASGGGAFLVL
Sbjct: 2    RRVVRQSKFRHVFGQAVKNDQCYDDIRVSRVTWDSSFCAVNPRFVAIIIEASGGGAFLVL 61

Query: 287  PLSKTGRIDKAYPTVCGHTGPVLDIDWCPHNDEVIASGSEDCTVMVWQIPEHGLTSPLTE 466
            PL KTGRIDK+YPTVCGHTGPVLDIDWCPHND+VIASGSEDCTVMVWQIPE+GLT  LTE
Sbjct: 62   PLHKTGRIDKSYPTVCGHTGPVLDIDWCPHNDQVIASGSEDCTVMVWQIPENGLTLSLTE 121

Query: 467  PVVVLEGHTKRVGIITWHPTARNVLLSAGCDNVVLIWNVGTAEELYRLDSLHPDLIYNIS 646
            PVV+LEGH+KRVGI+ WHPTARNVLLSAGCDN ++IWNVGT E L  LD +H D+IYN+S
Sbjct: 122  PVVILEGHSKRVGIVAWHPTARNVLLSAGCDNAIIIWNVGTGEALINLDDMHSDMIYNVS 181

Query: 647  WNRNGSLFCSACKDKSVRIIDPRRGTLVAEREKAHEGARPMRAIFLADGKVFTTGFSRMS 826
            WNRNGSL C+A KDK VR+IDPR+  ++AE+EKAHEGARPMRAIFLADG VFTTGFSRMS
Sbjct: 182  WNRNGSLICTASKDKKVRVIDPRKQEIIAEKEKAHEGARPMRAIFLADGNVFTTGFSRMS 241

Query: 827  ERQLALWDPENFGEPMALQELDSSNGALLPFYDPDTNVVYVCGKGDSSIRYFEITDESPY 1006
            ERQLALW+P+   EP+AL E+D+SNG LLPFYDPDT+++Y+CGKGDSSIRYFEITDESPY
Sbjct: 242  ERQLALWNPKTMEEPIALHEMDTSNGVLLPFYDPDTSIIYLCGKGDSSIRYFEITDESPY 301

Query: 1007 IHFLNKFTSKEPQKGMGSMPQRGLEVNKWQIAPVYKLH 1120
            +H+LN F+SKEPQ+GMG MP+RGL+VNK +IA  +KLH
Sbjct: 302  VHYLNTFSSKEPQRGMGYMPKRGLDVNKCEIARFFKLH 339


>ref|XP_003122082.1| PREDICTED: coronin-2A-like [Sus scrofa].
          Length = 525

 Score =  349 bits (896), Expect = 1e-96
 Identities = 161/338 (47%), Positives = 236/338 (69%), Gaps = 5/338 (1%)
 Frame = +2

Query: 119  RQSKFRHVFGQPVKNDQCYEDIRVSRVTWDSTFCAVNPKFLAVIVEASGGGAFLVLPLSK 298
            R SKFRHVFG+P   + CY+ + ++R   D+ FCAVNP F+AV+ E +GGGAFLV+PL +
Sbjct: 8    RSSKFRHVFGKPASKENCYDSVPITRSVHDNHFCAVNPHFIAVVTECAGGGAFLVIPLHQ 67

Query: 299  TGRIDKAYPTVCGHTGPVLDIDWCPHNDEVIASGSEDCTVMVWQIPEHGLTSPLTEPVVV 478
            TG++D  YP VCGH G VLD+ W P +D  IAS SED T+ +W IP+  +T  LT     
Sbjct: 68   TGKLDPHYPKVCGHRGNVLDVKWNPFDDFEIASCSEDATIKIWDIPKQLMTKNLTACKKE 127

Query: 479  LEGHTKRVGIITWHPTARNVLLSAGCDNVVLIWNVGTAEEL----YRLDSLHPDLIYNIS 646
            L GH +RVG++ WHPTA N+L S+G D  V++WN+ T E +     R  + H D+I ++S
Sbjct: 128  LVGHARRVGLVEWHPTAANILFSSGYDYKVMVWNLDTKESVIMSPVRTITCHQDVILSMS 187

Query: 647  WNRNGSLFCSACKDKSVRIIDPRRGTLVAEREKAHEGARPMRAIFLAD-GKVFTTGFSRM 823
            +N NGSL  +ACKD+ +R++DPR G ++  +E +++G R  + +FL +  K+ +TG SR 
Sbjct: 188  FNTNGSLLATACKDRKIRVLDPRAGAVL--QEASYKGHRANKVLFLGNLKKLLSTGTSRW 245

Query: 824  SERQLALWDPENFGEPMALQELDSSNGALLPFYDPDTNVVYVCGKGDSSIRYFEITDESP 1003
            + RQ+ALWD ++   P+  ++LD S+G L PFYDPDTN++YV GKGD +IRY+E++ + P
Sbjct: 246  NNRQMALWDQDDLSVPLTEEDLDGSSGVLFPFYDPDTNMLYVVGKGDGNIRYYEVSADKP 305

Query: 1004 YIHFLNKFTSKEPQKGMGSMPQRGLEVNKWQIAPVYKL 1117
            ++++L ++ S  PQKG+G MP+RGLEV+  +I   YKL
Sbjct: 306  HLNYLTEYRSYNPQKGIGVMPKRGLEVSSCEIFRFYKL 343


>ref|XP_003121805.1| PREDICTED: coronin-2B [Sus scrofa].
          Length = 480

 Score =  334 bits (856), Expect = 6e-92
 Identities = 161/340 (47%), Positives = 232/340 (68%), Gaps = 2/340 (0%)
 Frame = +2

Query: 104  FRKVVRQSKFRHVFGQPVKNDQCYEDIRVSRVTWDSTFCAVNPKFLAVIVEASGGGAFLV 283
            +R   R SKFR+V+G+    + C++ I +++   D+ FCAVN +FLA++ E++GGG+FLV
Sbjct: 8    WRPQYRSSKFRNVYGKVANREHCFDGIPITKNVHDNHFCAVNARFLAIVTESAGGGSFLV 67

Query: 284  LPLSKTGRIDKAYPTVCGHTGPVLDIDWCPHNDEVIASGSEDCTVMVWQIPEHGLTSPLT 463
            +PL +TGRI+  YP VCGH G VLDI W P  D +IAS SED +V +W+IPE GL   +T
Sbjct: 68   IPLEQTGRIEPNYPKVCGHQGNVLDIKWNPFIDNIIASCSEDTSVRIWEIPEGGLKRNMT 127

Query: 464  EPVVVLEGHTKRVGIITWHPTARNVLLSAGCDNVVLIWNVGTAEELYRLDSLHPDLIYNI 643
            E ++ L GH++RVG++ WHPT  N+L SAG D  VLIWN+   E +  +D  H D+I  +
Sbjct: 128  EALLELHGHSRRVGLVEWHPTTNNILFSAGYDYKVLIWNLDVGEPVKMID-CHSDVILCM 186

Query: 644  SWNRNGSLFCSACKDKSVRIIDPRRGTLVAERE-KAHEGARPMRAIFLADGK-VFTTGFS 817
            S+N +GSL  + CKDK +R+I+PR G ++ E   K H   R  R +FL + K + TTG S
Sbjct: 187  SFNTDGSLLTTTCKDKKLRVIEPRSGRVLQEANCKNH---RVNRVVFLGNMKRLLTTGVS 243

Query: 818  RMSERQLALWDPENFGEPMALQELDSSNGALLPFYDPDTNVVYVCGKGDSSIRYFEITDE 997
            R + RQ+ALWD E+   P+  +E+D  +G L PFYD DT+++Y+ GKGD +IRY+EI+ E
Sbjct: 244  RWNTRQIALWDQEDLSMPLIEEEIDGLSGLLFPFYDADTHMLYLAGKGDGNIRYYEISTE 303

Query: 998  SPYIHFLNKFTSKEPQKGMGSMPQRGLEVNKWQIAPVYKL 1117
             PY+ +L +F S  PQKG+G MP+ GL+V+  ++   YKL
Sbjct: 304  KPYLSYLMEFRSPAPQKGLGVMPKHGLDVSACEVFRFYKL 343


>ref|XP_003361333.1| PREDICTED: coronin-6-like [Sus scrofa].
          Length = 570

 Score =  328 bits (842), Expect = 3e-90
 Identities = 158/259 (61%), Positives = 194/259 (74%), Gaps = 8/259 (3%)
 Frame = +2

Query: 101 MFRKVVRQSKFRHVFGQPVKNDQCYEDIRVSRVTWDSTFCAVNPKFLAVIVEASGGGAFL 280
           M R+VVRQSKFRHVFGQ  K DQ YEDIRVS+VTWDS+FCAVNPKFLA+IVEA GGGAF+
Sbjct: 1   MSRRVVRQSKFRHVFGQAAKADQAYEDIRVSKVTWDSSFCAVNPKFLAIIVEAGGGGAFI 60

Query: 281 VLPLSKTGRIDKAYPTVCGHTGPVLDIDWCPHNDEVIASGSEDCTVMVWQIPEHGLTSPL 460
           VLPL+KTGR+DK YP V GHT PVLDIDWCPHND VIAS S+D T+MVWQIP++     +
Sbjct: 61  VLPLAKTGRVDKNYPLVTGHTAPVLDIDWCPHNDNVIASASDDTTIMVWQIPDYTPMRNI 120

Query: 461 TEPVVVLEGHTKRVGIITWHPTARNVLLSAGCDNVVLIWNVGTAEELYRLDSLHPDLIYN 640
           TEP++ LEGH+KRVGI++WHPTARNVLLSAG DNV++IWNVGT E L  LD +HPD+I++
Sbjct: 121 TEPIITLEGHSKRVGILSWHPTARNVLLSAGGDNVIIIWNVGTGEVLLSLDDIHPDVIHS 180

Query: 641 ISWNRNGSLFCSACKDKSVRIIDPRRGTLVAEREKAH--------EGARPMRAIFLADGK 796
                  SL  + CKDK++RIIDPR+G +VA R +          +   P RA+  A  +
Sbjct: 181 XXXXXXXSLLATTCKDKTLRIIDPRKGQVVAARPRREHALAPSLGQPGAPSRAV-AAPKR 239

Query: 797 VFTTGFSRMSERQLALWDP 853
                 + + +R+L LWDP
Sbjct: 240 AEAEQGAPVCQRELGLWDP 258



 Score =  124 bits (310), Expect = 1e-28
 Identities = 53/74 (71%), Positives = 67/74 (90%)
 Frame = +2

Query: 899  NGALLPFYDPDTNVVYVCGKGDSSIRYFEITDESPYIHFLNKFTSKEPQKGMGSMPQRGL 1078
            NG LLPFYDPD+++VY+CGKGDSSIRYFEIT+E P++H+LN F+SKEPQ+GMG MP+RGL
Sbjct: 378  NGVLLPFYDPDSSIVYLCGKGDSSIRYFEITEEPPFVHYLNTFSSKEPQRGMGFMPKRGL 437

Query: 1079 EVNKWQIAPVYKLH 1120
            +V+K +IA  YKLH
Sbjct: 438  DVSKCEIARFYKLH 451


>ref|XP_003362227.1| PREDICTED: coronin-1C-like, partial [Sus scrofa].
          Length = 332

 Score =  311 bits (798), Expect = 3e-85
 Identities = 139/193 (72%), Positives = 168/193 (87%)
 Frame = +2

Query: 542  LSAGCDNVVLIWNVGTAEELYRLDSLHPDLIYNISWNRNGSLFCSACKDKSVRIIDPRRG 721
            L +GCDN ++IWNVGT E L  LD +H D+IYN+SWNRNGSL C+A KDK VR+IDPR+ 
Sbjct: 5    LLSGCDNAIIIWNVGTGEALINLDDMHSDMIYNVSWNRNGSLICTASKDKKVRVIDPRKQ 64

Query: 722  TLVAEREKAHEGARPMRAIFLADGKVFTTGFSRMSERQLALWDPENFGEPMALQELDSSN 901
             ++ E+EKAHEGARPMRAIFLADG VFTTGFSRMSERQLALW+P+   EP+AL E+D+SN
Sbjct: 65   EIIQEKEKAHEGARPMRAIFLADGNVFTTGFSRMSERQLALWNPKTMEEPIALHEMDTSN 124

Query: 902  GALLPFYDPDTNVVYVCGKGDSSIRYFEITDESPYIHFLNKFTSKEPQKGMGSMPQRGLE 1081
            G LLPFYDPDT+++Y+CGKGDSSIRYFEITDESPY+H+LN F+SKEPQ+GMG MP+RGL+
Sbjct: 125  GVLLPFYDPDTSIIYLCGKGDSSIRYFEITDESPYVHYLNTFSSKEPQRGMGYMPKRGLD 184

Query: 1082 VNKWQIAPVYKLH 1120
            VNK +IA  +KLH
Sbjct: 185  VNKCEIARFFKLH 197


>ref|XP_003360880.1| PREDICTED: LOW QUALITY PROTEIN: coronin-1A-like, partial [Sus
           scrofa].
          Length = 400

 Score =  250 bits (639), Expect = 9e-67
 Identities = 124/207 (59%), Positives = 150/207 (72%), Gaps = 3/207 (1%)
 Frame = +2

Query: 170 CYEDIRVSRVTWDSTFCAVNPKFLAVIVEASGGGAFLVLPLSKTGRIDKAYPTVCGHTGP 349
           CYED+RVS+ TWDS FCAVNPKF+A+I EASGGGAFLVLPLSKTGR+DK  P VCGHT P
Sbjct: 51  CYEDVRVSQTTWDSGFCAVNPKFVALICEASGGGAFLVLPLSKTGRVDKNAPMVCGHTAP 110

Query: 350 VLDIDWCPHNDEVIASGSEDCTVMVWQIPEHGLTSPLTEPVVVLEGHTKRVGIITW--HP 523
           VLDI WCPHND VIASGSEDCTVMV                VVL G  K  G   W  HP
Sbjct: 111 VLDIAWCPHNDNVIASGSEDCTVMV-------------SGGVVL-GRGKAQGFXYWGHHP 156

Query: 524 TARNVLLSAGCDNVVLIWNVGTAEELYRLDS-LHPDLIYNISWNRNGSLFCSACKDKSVR 700
                    GCDNV+L+W+VGT   +  L S +HPD IY++ W+R+G+L C++C+DK VR
Sbjct: 157 ---------GCDNVILVWDVGTGAAVLTLGSDVHPDTIYSVDWSRDGALICTSCRDKRVR 207

Query: 701 IIDPRRGTLVAEREKAHEGARPMRAIF 781
           II+PR+GT+VAE+++ HEG RP+RA+F
Sbjct: 208 IIEPRKGTIVAEKDRPHEGTRPVRAVF 234



 Score = 66.2 bits (160), Expect = 3e-11
 Identities = 31/54 (57%), Positives = 38/54 (70%)
 Frame = +2

Query: 959  GDSSIRYFEITDESPYIHFLNKFTSKEPQKGMGSMPQRGLEVNKWQIAPVYKLH 1120
            GDSSIRYFEIT E+P++H+L+ F           MP+RGLEVNK +IA  YKLH
Sbjct: 235  GDSSIRYFEITSEAPFLHYLSMFXXXXXXXXXXYMPKRGLEVNKCEIARFYKLH 288


>ref|XP_003359180.1| PREDICTED: hypothetical protein LOC100620779 [Sus scrofa].
          Length = 442

 Score =  211 bits (536), Expect = 8e-55
 Identities = 95/106 (89%), Positives = 104/106 (98%)
 Frame = +2

Query: 107 RKVVRQSKFRHVFGQPVKNDQCYEDIRVSRVTWDSTFCAVNPKFLAVIVEASGGGAFLVL 286
           R+VVRQSKFRHVFGQ VKNDQCY+DIRVSRVTWDS+FCAVNP+F+A+I+EASGGGAFLVL
Sbjct: 27  RRVVRQSKFRHVFGQAVKNDQCYDDIRVSRVTWDSSFCAVNPRFVAIIIEASGGGAFLVL 86

Query: 287 PLSKTGRIDKAYPTVCGHTGPVLDIDWCPHNDEVIASGSEDCTVMV 424
           PL KTGRIDK+YPTVCGHTGPVLDIDWCPHND+VIASGSEDCTVMV
Sbjct: 87  PLHKTGRIDKSYPTVCGHTGPVLDIDWCPHNDQVIASGSEDCTVMV 132


>ref|XP_003131831.2| PREDICTED: coronin-6-like [Sus scrofa].
          Length = 381

 Score =  204 bits (519), Expect = 7e-53
 Identities = 90/129 (69%), Positives = 113/129 (87%)
 Frame = +2

Query: 734  EREKAHEGARPMRAIFLADGKVFTTGFSRMSERQLALWDPENFGEPMALQELDSSNGALL 913
            ER  AHEG RPMRA+F   G++FTTGF+RMS+R+L LWDP NF EP+ALQE+D+SNG LL
Sbjct: 121  ERFAAHEGMRPMRAVFTRQGQIFTTGFTRMSQRELGLWDPNNFEEPVALQEMDTSNGVLL 180

Query: 914  PFYDPDTNVVYVCGKGDSSIRYFEITDESPYIHFLNKFTSKEPQKGMGSMPQRGLEVNKW 1093
            PFYDPD+++VY+CGKGDSSIRYFEIT+E P++H+LN F+SKEPQ+GMG MP+RGL+V+K 
Sbjct: 181  PFYDPDSSIVYLCGKGDSSIRYFEITEEPPFVHYLNTFSSKEPQRGMGFMPKRGLDVSKC 240

Query: 1094 QIAPVYKLH 1120
            +IA  YKLH
Sbjct: 241  EIARFYKLH 249


>ref|XP_003124691.2| PREDICTED: coronin-7-like [Sus scrofa].
          Length = 928

 Score =  191 bits (484), Expect = 8e-49
 Identities = 115/337 (34%), Positives = 176/337 (52%), Gaps = 6/337 (1%)
 Frame = +2

Query: 125  SKFRHVFGQPVKNDQCYEDIRVSRVTWDST---FCAVNPKFLAVIVEASGGGAFLVLPLS 295
            SKFRH  G  +  D    +++   +T       FCA   +    ++  S GG   VL L 
Sbjct: 474  SKFRHTQGTVLHRDSHITNLKGLNLTTPGESDGFCANRLRVAVPLL--SSGGQVAVLELR 531

Query: 296  KTGRI-DKAYPTVCGHTGPVLDIDWCPHNDEVIASGSEDCTVMVWQIPEHGLTSPLTEPV 472
            K GR+ D A PT+  +   V D+ W P +   +A   ED  + +W++P  GL   LT P 
Sbjct: 532  KPGRLPDTALPTL-QNGAAVTDLAWDPFDLHRLAVAGEDARIRLWRVPPEGLEEVLTTPE 590

Query: 473  VVLEGHTKRVGIITWHPTARNVLLSAGCDNVVLIWNVGTAEELYRLDSLHPDLIYNISWN 652
             VL GHT+++  + +HP A +VL S+  D  + IW++    E  RL   H D I+ ++W+
Sbjct: 591  AVLTGHTEKIYSLRFHPLAADVLASSSYDLTIRIWDLQAGVERLRLQG-HRDQIFGLAWS 649

Query: 653  RNGSLFCSACKDKSVRIIDPRRGTLVAEREKAHEGARPMRAIFLADGK-VFTTGFSRMSE 829
             NG    + CKD  +R+ +PR      +     EGAR  R +++ DG  +  +GF   SE
Sbjct: 650  PNGQQLATVCKDGRLRVYEPRSSPEPLQEGPGPEGARGARVVWVCDGHCLLVSGFDSRSE 709

Query: 830  RQLALWDPENFGE-PMALQELDSSNGALLPFYDPDTNVVYVCGKGDSSIRYFEITDESPY 1006
            RQL L+  E     P+A+  LD +   LLP YDPDT++V + GKGD+ +  +E+  E+P+
Sbjct: 710  RQLLLFSAEALASGPLAVLGLDVAPSTLLPSYDPDTSLVLLTGKGDTRVFLYELLPEAPF 769

Query: 1007 IHFLNKFTSKEPQKGMGSMPQRGLEVNKWQIAPVYKL 1117
                N FTS +P KG   +P+   EV + + A   +L
Sbjct: 770  FLECNSFTSPDPHKGFVLLPKTECEVREVEFARCLRL 806



 Score =  159 bits (402), Expect = 3e-39
 Identities = 102/338 (30%), Positives = 176/338 (52%), Gaps = 7/338 (2%)
 Frame = +2

Query: 125  SKFRHVFGQPVKNDQCYEDIRVSRVTWDSTFCAVNPKFLAVIVEASGGGAFLVLPLSKTG 304
            SKFRH   +P + +    DIR             +   +A I +  G     ++PL   G
Sbjct: 7    SKFRHTEARPPRREAWISDIRAGTAPSCGNHIKSSCSLIAFISDRPG--VLGIVPLEGQG 64

Query: 305  RIDKAYPTVCG-HTGPVLDIDWCPHNDEVIASGSEDCTVMVWQIPEHGLTSPLTEPVVVL 481
              DK + T  G H+  V D+D+ P +D ++A+ S D TV +W++P  G   P + P +VL
Sbjct: 65   E-DKRHVTHLGCHSDLVTDLDFSPFDDFLLATASADRTVKLWRLPAPGQALP-SGPGLVL 122

Query: 482  EGHTKRVGIITWHPTARNVLLSAGCDNVVLIWNVGTAEELYRLDSLHPDLIYNISWNRNG 661
                  V ++ +HP+A  VLLSA     + +W+    + L  L + H DL+ +  W+++G
Sbjct: 123  GPEDVPVEVLQFHPSADGVLLSAA-GKALKVWDAARQQPLTEL-AAHGDLVQSAIWSQDG 180

Query: 662  SLFCSACKDKSVRIIDPRRGTLVAEREKAHEGARPMRAIFLADGK-VFTTGFSRMSERQL 838
            +L  + CKDK +RI DPR     ++  +AHE +R  R ++    + + +TGF++M ER++
Sbjct: 181  ALVGTTCKDKQLRIFDPRAKPEASQSTQAHENSRDGRLVWTGTREHLVSTGFNQMREREV 240

Query: 839  ALWDPENFGEPMALQELDSSN-----GALLPFYDPDTNVVYVCGKGDSSIRYFEITDESP 1003
             LWD   F   +A   LD+S      G+L+P  DPD+ ++ + GKG+S +  +E+  + P
Sbjct: 241  KLWDIRLFSGALASLTLDASPRYERLGSLMPLLDPDSGLLVLAGKGESQLSCYEVAPQQP 300

Query: 1004 YIHFLNKFTSKEPQKGMGSMPQRGLEVNKWQIAPVYKL 1117
             +  + +   +   +G   +P+R L V   ++  V +L
Sbjct: 301  VLSPVTQCLLESALRGAALVPRRALAVLGCEVLRVLQL 338


  Database: RefSeq49_SP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 11,343,932
  Number of sequences in database:  24,897
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 27,568,597
Number of extensions: 805265
Number of successful extensions: 4370
Number of sequences better than 1.0e-05: 38
Number of HSP's gapped: 4206
Number of HSP's successfully gapped: 57
Length of query: 374
Length of database: 11,343,932
Length adjustment: 100
Effective length of query: 274
Effective length of database: 8,854,232
Effective search space: 2426059568
Effective search space used: 2426059568
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)

BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-002701
         (1122 letters)

Database: Sscrofa_10.2.fasta 
           4582 sequences; 2,808,509,378 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Sscrofa_Chr02                                                         398   e-108
gb|JH118999.1| Sus scrofa unplaced genomic scaffold ChrUScaf4366      115   5e-23
Sscrofa_Chr14                                                         115   5e-23
gb|GL894036.2| Sus scrofa unplaced genomic scaffold ChrUScaf1920       84   2e-13
gb|GL892962.1| Sus scrofa unplaced genomic scaffold chrU_scaffol...    66   4e-08

>Sscrofa_Chr02 
||          Length = 162569375

 Score =  398 bits (201), Expect = e-108
 Identities = 201/201 (100%)
 Strand = Plus / Plus

                                                                           
Query: 98      gtcatgttccgcaaagtggttcggcagagcaaattccgacatgtgttcgggcagcctgtc 157
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3800015 gtcatgttccgcaaagtggttcggcagagcaaattccgacatgtgttcgggcagcctgtc 3800074

                                                                           
Query: 158     aagaacgaccagtgctacgaggacattcgcgtgtcccgcgtcacctgggacagcaccttc 217
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3800075 aagaacgaccagtgctacgaggacattcgcgtgtcccgcgtcacctgggacagcaccttc 3800134

                                                                           
Query: 218     tgcgccgtcaaccccaagttcctggcagtgattgtggaggccagcggcgggggcgccttc 277
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3800135 tgcgccgtcaaccccaagttcctggcagtgattgtggaggccagcggcgggggcgccttc 3800194

                                    
Query: 278     ctggtgctccccctaagcaag 298
               |||||||||||||||||||||
Sbjct: 3800195 ctggtgctccccctaagcaag 3800215



 Score =  371 bits (187), Expect = e-100
 Identities = 187/187 (100%)
 Strand = Plus / Plus

                                                                           
Query: 548     gcaggctgcgacaacgtggtgctcatctggaacgtgggcaccgcggaggagctgtaccgc 607
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3801075 gcaggctgcgacaacgtggtgctcatctggaacgtgggcaccgcggaggagctgtaccgc 3801134

                                                                           
Query: 608     ctggacagcctgcaccccgacctcatctacaacatcagctggaaccgcaacggcagcctc 667
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3801135 ctggacagcctgcaccccgacctcatctacaacatcagctggaaccgcaacggcagcctc 3801194

                                                                           
Query: 668     ttctgctccgcgtgcaaggacaagagcgtgcgcatcattgacccccgccgggggaccctg 727
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3801195 ttctgctccgcgtgcaaggacaagagcgtgcgcatcattgacccccgccgggggaccctg 3801254

                      
Query: 728     gtggcgg 734
               |||||||
Sbjct: 3801255 gtggcgg 3801261



 Score =  262 bits (132), Expect = 4e-67
 Identities = 132/132 (100%)
 Strand = Plus / Plus

                                                                           
Query: 421     ggtgtggcagatcccagagcacgggctgacctccccgctgacagagcccgtggtggtgct 480
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3800842 ggtgtggcagatcccagagcacgggctgacctccccgctgacagagcccgtggtggtgct 3800901

                                                                           
Query: 481     ggagggtcacaccaagcgcgtgggcatcatcacgtggcacccgacggcccgcaacgtgct 540
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3800902 ggagggtcacaccaagcgcgtgggcatcatcacgtggcacccgacggcccgcaacgtgct 3800961

                           
Query: 541     gctcagcgcagg 552
               ||||||||||||
Sbjct: 3800962 gctcagcgcagg 3800973



 Score =  254 bits (128), Expect = 9e-65
 Identities = 128/128 (100%)
 Strand = Plus / Plus

                                                                           
Query: 297     agacgggccgcattgacaaggcctacccgacagtgtgtggacacacgggacccgtcctgg 356
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3800628 agacgggccgcattgacaaggcctacccgacagtgtgtggacacacgggacccgtcctgg 3800687

                                                                           
Query: 357     acatcgactggtgtccccacaatgacgaagtcatcgccagcggctcggaggactgcacgg 416
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3800688 acatcgactggtgtccccacaatgacgaagtcatcgccagcggctcggaggactgcacgg 3800747

                       
Query: 417     tcatggtg 424
               ||||||||
Sbjct: 3800748 tcatggtg 3800755



 Score =  242 bits (122), Expect = 3e-61
 Identities = 122/122 (100%)
 Strand = Plus / Plus

                                                                           
Query: 733     ggagcgggagaaggctcacgagggggcccggcccatgcgagccatcttcctggcggacgg 792
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3801348 ggagcgggagaaggctcacgagggggcccggcccatgcgagccatcttcctggcggacgg 3801407

                                                                           
Query: 793     caaggtgttcaccacaggcttcagccgcatgagcgagcggcagctggcgctctgggaccc 852
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3801408 caaggtgttcaccacaggcttcagccgcatgagcgagcggcagctggcgctctgggaccc 3801467

                 
Query: 853     ag 854
               ||
Sbjct: 3801468 ag 3801469



 Score =  222 bits (112), Expect = 3e-55
 Identities = 130/136 (95%)
 Strand = Plus / Plus

                                                                           
Query: 957     agggtgactccagcatccggtactttgagatcacagacgagtccccctacatccacttcc 1016
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3802250 agggtgactccagcatccggtactttgagatcacagacgagtccccctacatccacttcc 3802309

                                                                           
Query: 1017    tgaacaaattcaccagcaaagaacctcagaagggcatgggtagcatgccccaaaggggcc 1076
               |||||| ||||||||||||||| ||||||| ||||||||||||||||||| | |||||||
Sbjct: 3802310 tgaacacattcaccagcaaagagcctcagaggggcatgggtagcatgcccaagaggggcc 3802369

                               
Query: 1077    tggaggtcaacaagtg 1092
               ||||||||| ||||||
Sbjct: 3802370 tggaggtcagcaagtg 3802385



 Score =  194 bits (98), Expect = 7e-47
 Identities = 101/102 (99%)
 Strand = Plus / Plus

                                                                           
Query: 858     acttcggggagcccatggccctgcaggagttggactctagcaacggggctctgttgccct 917
               |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3802068 acttcggggaacccatggccctgcaggagttggactctagcaacggggctctgttgccct 3802127

                                                         
Query: 918     tctacgaccctgacaccaacgtggtctacgtctgcggcaagg 959
               ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3802128 tctacgaccctgacaccaacgtggtctacgtctgcggcaagg 3802169



 Score =  159 bits (80), Expect = 4e-36
 Identities = 80/80 (100%)
 Strand = Plus / Plus

                                                                           
Query: 19      cctgattcccgcttcctgcttcccagagactgggatccggagccacccgaggacggtgct 78
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3799139 cctgattcccgcttcctgcttcccagagactgggatccggagccacccgaggacggtgct 3799198

                                   
Query: 79      gcagcccccgggcgtccccg 98
               ||||||||||||||||||||
Sbjct: 3799199 gcagcccccgggcgtccccg 3799218


>gb|JH118999.1| Sus scrofa unplaced genomic scaffold ChrUScaf4366
          Length = 129222

 Score =  115 bits (58), Expect = 5e-23
 Identities = 100/114 (87%)
 Strand = Plus / Minus

                                                                          
Query: 739    ggagaaggctcacgagggggcccggcccatgcgagccatcttcctggcggacggcaaggt 798
              |||||| |||||||| || || ||||||||| |||||||||| ||||| || ||||| ||
Sbjct: 127565 ggagaaagctcacgaaggagcgcggcccatgagagccatctttctggctgatggcaacgt 127506

                                                                    
Query: 799    gttcaccacaggcttcagccgcatgagcgagcggcagctggcgctctgggaccc 852
               |||||||| || ||||||||||||||||||||||||||||| |||||| ||||
Sbjct: 127505 cttcaccacgggtttcagccgcatgagcgagcggcagctggccctctggaaccc 127452


>Sscrofa_Chr14 
||          Length = 153851969

 Score =  115 bits (58), Expect = 5e-23
 Identities = 100/114 (87%)
 Strand = Plus / Plus

                                                                            
Query: 739      ggagaaggctcacgagggggcccggcccatgcgagccatcttcctggcggacggcaaggt 798
                |||||| |||||||| || || ||||||||| |||||||||| ||||| || ||||| ||
Sbjct: 44679153 ggagaaagctcacgaaggagcgcggcccatgagagccatctttctggctgatggcaacgt 44679212

                                                                      
Query: 799      gttcaccacaggcttcagccgcatgagcgagcggcagctggcgctctgggaccc 852
                 |||||||| || ||||||||||||||||||||||||||||| |||||| ||||
Sbjct: 44679213 cttcaccacgggtttcagccgcatgagcgagcggcagctggccctctggaaccc 44679266



 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 94/113 (83%)
 Strand = Plus / Plus

                                                                            
Query: 311      gacaaggcctacccgacagtgtgtggacacacgggacccgtcctggacatcgactggtgt 370
                |||||| ||||||| ||||| ||||| ||||| ||||| || |||||||| |||||||| 
Sbjct: 44661801 gacaagtcctaccctacagtatgtggccacacaggaccggtgctggacatagactggtgc 44661860

                                                                     
Query: 371      ccccacaatgacgaagtcatcgccagcggctcggaggactgcacggtcatggt 423
                || || |||||  | ||||| |||||||| || ||||||||||| || |||||
Sbjct: 44661861 ccacataatgatcaggtcattgccagcggttcagaggactgcacagttatggt 44661913



 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 36/38 (94%)
 Strand = Plus / Plus

                                                      
Query: 515      tggcacccgacggcccgcaacgtgctgctcagcgcagg 552
                |||||||||||||||||||| ||||| |||||||||||
Sbjct: 44676070 tggcacccgacggcccgcaatgtgctactcagcgcagg 44676107


>gb|GL894036.2| Sus scrofa unplaced genomic scaffold ChrUScaf1920
          Length = 87809

 Score = 83.8 bits (42), Expect = 2e-13
 Identities = 120/146 (82%)
 Strand = Plus / Minus

                                                                         
Query: 113   gtggttcggcagagcaaattccgacatgtgttcgggcagcctgtcaagaacgaccagtgc 172
             ||||||||||||||||| ||||| |||||||| || ||| | |  |||   ||||||  |
Sbjct: 87610 gtggttcggcagagcaagttccgccatgtgtttggacaggcagcaaaggctgaccaggcc 87551

                                                                         
Query: 173   tacgaggacattcgcgtgtcccgcgtcacctgggacagcaccttctgcgccgtcaacccc 232
             ||||||||||| || ||||||   ||||| ||||||||| | ||||| ||||||||||||
Sbjct: 87550 tacgaggacatccgtgtgtccaaggtcacatgggacagctcattctgtgccgtcaacccc 87491

                                       
Query: 233   aagttcctggcagtgattgtggaggc 258
             || ||||||||  | |||||||||||
Sbjct: 87490 aaattcctggccattattgtggaggc 87465


>gb|GL892962.1| Sus scrofa unplaced genomic scaffold chrU_scaffold1775
          Length = 17377

 Score = 65.9 bits (33), Expect = 4e-08
 Identities = 78/93 (83%)
 Strand = Plus / Plus

                                                                        
Query: 332  tgtggacacacgggacccgtcctggacatcgactggtgtccccacaatgacgaagtcatc 391
            ||||| |||||||  ||||| |||||||||| |||||| || ||||||||  | ||||| 
Sbjct: 3131 tgtggccacacggcgcccgtgctggacatcgcctggtgcccgcacaatgataacgtcatt 3190

                                             
Query: 392  gccagcggctcggaggactgcacggtcatggtg 424
            ||||| ||||| || || |||||||||||||||
Sbjct: 3191 gccagtggctccgaagattgcacggtcatggtg 3223


  Database: Sscrofa_10.2.fasta
    Posted date:  Nov 16, 2011 10:34 AM
  Number of letters in database: 2,808,509,378
  Number of sequences in database:  4582
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 22,112,523
Number of extensions: 105
Number of successful extensions: 105
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 105
Number of HSP's successfully gapped: 14
Length of query: 1122
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1101
Effective length of database: 2,808,413,156
Effective search space: 3092062884756
Effective search space used: 3092062884756
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)