Animal-Genome cDNA 20110601C-002863


Search to RefSeqBP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-002863
         (2392 letters)

Database: RefSeq49_BP.fasta 
           33,088 sequences; 17,681,374 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001075197.1| serine/threonine-protein phosphatase 2A 56 k...   759   0.0  
Alignment   gi|NP_001076937.1| serine/threonine-protein phosphatase 2A 56 k...   622   e-178
Alignment   gi|NP_001068700.1| serine/threonine-protein phosphatase 2A 56 k...   593   e-169
Alignment   gi|NP_001193287.1| serine/threonine-protein phosphatase 2A 56 k...   544   e-154
Alignment   gi|NP_001076845.1| serine/threonine-protein phosphatase 2A 56 k...   536   e-152
Alignment   gi|XP_002684527.1| PREDICTED: protein phosphatase 2, regulatory...   536   e-152
Alignment   gi|XP_002684526.1| PREDICTED: protein phosphatase 2, regulatory...   536   e-152

>ref|NP_001075197.1| serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit
            alpha isoform [Bos taurus].
          Length = 489

 Score =  759 bits (1959), Expect = 0.0
 Identities = 394/467 (84%), Positives = 395/467 (84%)
 Frame = +3

Query: 309  EKVDGFTRKSVXXXXXXXXXXXXXXXXXXXXXPELHPLPQLKDATSNEQQELFCQKLQQC 488
            EKVDGFTRKSV                     PELHPLPQLKDATSNEQQELFCQKLQQC
Sbjct: 22   EKVDGFTRKSVRKAQRQKRSQGSSQFRSQCSQPELHPLPQLKDATSNEQQELFCQKLQQC 81

Query: 489  CILFDFMDSVSDLKSKEIKRATLNELVEYVSTNRGVIVESAYSDIVKMISANIFRTLXXX 668
            CILFDFMDSVSDLKSKEIKRATLNELVEYVSTNRGVIVESAYSDIVKMISANIFRTL   
Sbjct: 82   CILFDFMDSVSDLKSKEIKRATLNELVEYVSTNRGVIVESAYSDIVKMISANIFRTLPPS 141

Query: 669  XXXXXXXXXXXXXXXASWPHIQLVYEFFLRFLESPDFQPSIAKRYIDQKFVQQLLELFDS 848
                           ASWPHIQLVYEFFLRFLESPDFQPSIAKRYIDQKFVQQLLELFDS
Sbjct: 142  DNPDFDPEEDEPTLEASWPHIQLVYEFFLRFLESPDFQPSIAKRYIDQKFVQQLLELFDS 201

Query: 849  EDPRERDFLKTVLHRIYGKFLGLRAFIRKQINNIFLRFIYETEHFNGVAELLEILGSIIN 1028
            EDPRERDFLKTVLHRIYGKFLGLRAFIRKQINNIFLRFIYETEHFNGVAELLEILGSIIN
Sbjct: 202  EDPRERDFLKTVLHRIYGKFLGLRAFIRKQINNIFLRFIYETEHFNGVAELLEILGSIIN 261

Query: 1029 GFALPLKAEHKQFLMKVLIPMHTAKGLALFHAQLAYCVVQFLEKDTTLTEPVIRGLLKFW 1208
            GFALPLKAEHKQFLMKVLIPMHTAKGLALFHAQLAYCVVQFLEKDTTLTEPVIRGLLKFW
Sbjct: 262  GFALPLKAEHKQFLMKVLIPMHTAKGLALFHAQLAYCVVQFLEKDTTLTEPVIRGLLKFW 321

Query: 1209 PKTCSQKEVMFLGEIEEILDVIEPTQFKKIEEPLFKQISKCVSSSHFQVAERALYFWNNE 1388
            PKTCSQKEVMFLGEIEEILDVIEPTQFKKIEEPLFKQISKCVSSSHFQVAERALYFWNNE
Sbjct: 322  PKTCSQKEVMFLGEIEEILDVIEPTQFKKIEEPLFKQISKCVSSSHFQVAERALYFWNNE 381

Query: 1389 YILSLIEENIDKILPIMFGSLYKISKEHWNPTIVALVYNVLKTLMEMNGKLFDDLTSSYX 1568
            YILSLIEENIDKILPIMFGSLYKISKEHWNPTIVALVYNVLKTLMEMNGKLFDDLTSSY 
Sbjct: 382  YILSLIEENIDKILPIMFGSLYKISKEHWNPTIVALVYNVLKTLMEMNGKLFDDLTSSYK 441

Query: 1569 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSAYNMHSILSNTSD 1709
                                            NSAYNMHSILSNT+D
Sbjct: 442  AERQREKKKELEREELWKKLEELKLKKALEKQNSAYNMHSILSNTND 488


>ref|NP_001076937.1| serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit
            epsilon isoform [Bos taurus].
          Length = 467

 Score =  622 bits (1603), Expect = e-178
 Identities = 306/419 (73%), Positives = 349/419 (83%)
 Frame = +3

Query: 309  EKVDGFTRKSVXXXXXXXXXXXXXXXXXXXXXPELHPLPQLKDATSNEQQELFCQKLQQC 488
            +KVDGF+RKSV                      EL PLP LKD  S+EQ ELF +KLQQC
Sbjct: 12   DKVDGFSRKSVRKARQKRSQSSSQFRSQGKPI-ELTPLPLLKDVPSSEQPELFLKKLQQC 70

Query: 489  CILFDFMDSVSDLKSKEIKRATLNELVEYVSTNRGVIVESAYSDIVKMISANIFRTLXXX 668
            C++FDFMD++SDLK KE KR+TLNELV+Y++ +RG + E  Y ++V+M+S NIFRTL   
Sbjct: 71   CVIFDFMDTLSDLKMKEYKRSTLNELVDYITISRGCLTEQTYPEVVRMVSCNIFRTLPPS 130

Query: 669  XXXXXXXXXXXXXXXASWPHIQLVYEFFLRFLESPDFQPSIAKRYIDQKFVQQLLELFDS 848
                           ASWPH+QLVYEFF+RFLES +FQPSIAK+YIDQKFV QLLELFDS
Sbjct: 131  DSNEFDPEEDEPTLEASWPHLQLVYEFFIRFLESQEFQPSIAKKYIDQKFVLQLLELFDS 190

Query: 849  EDPRERDFLKTVLHRIYGKFLGLRAFIRKQINNIFLRFIYETEHFNGVAELLEILGSIIN 1028
            EDPRERD+LKTVLHRIYGKFLGLRAFIRKQINNIFLRF+YETEHFNGVAELLEILGSIIN
Sbjct: 191  EDPRERDYLKTVLHRIYGKFLGLRAFIRKQINNIFLRFVYETEHFNGVAELLEILGSIIN 250

Query: 1029 GFALPLKAEHKQFLMKVLIPMHTAKGLALFHAQLAYCVVQFLEKDTTLTEPVIRGLLKFW 1208
            GFALPLKAEHKQFL+KVLIP+HT + L+LFHAQLAYC+VQFLEKD +LTEPVIRGL+KFW
Sbjct: 251  GFALPLKAEHKQFLVKVLIPLHTVRSLSLFHAQLAYCIVQFLEKDPSLTEPVIRGLMKFW 310

Query: 1209 PKTCSQKEVMFLGEIEEILDVIEPTQFKKIEEPLFKQISKCVSSSHFQVAERALYFWNNE 1388
            PKTCSQKEVMFLGE+EEILDVIEP+QF KI+EPLFKQI+KCVSS HFQVAERALY+WNNE
Sbjct: 311  PKTCSQKEVMFLGELEEILDVIEPSQFVKIQEPLFKQIAKCVSSPHFQVAERALYYWNNE 370

Query: 1389 YILSLIEENIDKILPIMFGSLYKISKEHWNPTIVALVYNVLKTLMEMNGKLFDDLTSSY 1565
            YI+SLIEEN + ILPIMF SLY+ISKEHWNP IVALVYNVLK  MEMN  +FD+LT++Y
Sbjct: 371  YIMSLIEENSNVILPIMFSSLYRISKEHWNPAIVALVYNVLKAFMEMNSTMFDELTATY 429


>ref|NP_001068700.1| serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit
            beta isoform [Bos taurus].
          Length = 496

 Score =  593 bits (1529), Expect = e-169
 Identities = 290/419 (69%), Positives = 341/419 (81%)
 Frame = +3

Query: 309  EKVDGFTRKSVXXXXXXXXXXXXXXXXXXXXXPELHPLPQLKDATSNEQQELFCQKLQQC 488
            +KVDGF+R+S+                      EL PLP LKD  ++E  EL  +KL QC
Sbjct: 26   DKVDGFSRRSLRRARPRRSHSSSQFRYQSNQQ-ELTPLPLLKDVPASELHELLSRKLAQC 84

Query: 489  CILFDFMDSVSDLKSKEIKRATLNELVEYVSTNRGVIVESAYSDIVKMISANIFRTLXXX 668
             ++FDF+D V+DLK KE+KRA LNELVE V + RGV++E  Y DI++MIS NIFRTL   
Sbjct: 85   GVMFDFLDCVADLKGKEVKRAALNELVECVGSTRGVLIEPVYPDIIRMISVNIFRTLPPS 144

Query: 669  XXXXXXXXXXXXXXXASWPHIQLVYEFFLRFLESPDFQPSIAKRYIDQKFVQQLLELFDS 848
                            SWPH+QLVYEFFLRFLESPDFQPS+AKRY+DQKFV  LLELFDS
Sbjct: 145  ENPEFDPEEDEPNLEPSWPHLQLVYEFFLRFLESPDFQPSVAKRYVDQKFVLMLLELFDS 204

Query: 849  EDPRERDFLKTVLHRIYGKFLGLRAFIRKQINNIFLRFIYETEHFNGVAELLEILGSIIN 1028
            EDPRER++LKT+LHR+YGKFLGLRA+IRKQ ++IFLRFIYE EHFNGVAELLEILGSIIN
Sbjct: 205  EDPREREYLKTILHRVYGKFLGLRAYIRKQCSHIFLRFIYEFEHFNGVAELLEILGSIIN 264

Query: 1029 GFALPLKAEHKQFLMKVLIPMHTAKGLALFHAQLAYCVVQFLEKDTTLTEPVIRGLLKFW 1208
            GFALPLK EHKQFL++VLIP+H+ K L++FHAQLAYCVVQFLEKD TLTE VIRGLLK+W
Sbjct: 265  GFALPLKTEHKQFLVRVLIPLHSVKSLSVFHAQLAYCVVQFLEKDATLTEHVIRGLLKYW 324

Query: 1209 PKTCSQKEVMFLGEIEEILDVIEPTQFKKIEEPLFKQISKCVSSSHFQVAERALYFWNNE 1388
            PKTC+QKEVMFLGE+EEILDVIEP+QF KI+EPLFKQ+++CVSS HFQVAERALYFWNNE
Sbjct: 325  PKTCTQKEVMFLGEMEEILDVIEPSQFVKIQEPLFKQVARCVSSPHFQVAERALYFWNNE 384

Query: 1389 YILSLIEENIDKILPIMFGSLYKISKEHWNPTIVALVYNVLKTLMEMNGKLFDDLTSSY 1565
            YILSLIE+N   +LP +FG+LY++SKEHWN TIV+L+YNVLKT MEMNGKLFD+LT+SY
Sbjct: 385  YILSLIEDNCHTVLPAVFGTLYQVSKEHWNQTIVSLIYNVLKTFMEMNGKLFDELTASY 443


>ref|NP_001193287.1| serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit
            delta isoform [Bos taurus].
          Length = 600

 Score =  544 bits (1401), Expect = e-154
 Identities = 265/390 (67%), Positives = 317/390 (81%), Gaps = 4/390 (1%)
 Frame = +3

Query: 408  ELHPLPQLKDATSNEQQELFCQKLQQCCILFDFM-DSVSDLKSKEIKRATLNELVEYVST 584
            EL  LP LKD+ + E++ELF QKL+QCC+LFDF+ D +SDLK KE+KRA LNE+VEY++ 
Sbjct: 97   ELQKLPALKDSPTQEREELFIQKLRQCCVLFDFVSDPLSDLKFKEVKRAGLNEMVEYITH 156

Query: 585  NRGVIVESAYSDIVKMISANIFRTLXXXXXXXXXXXXXXXXXX---ASWPHIQLVYEFFL 755
            +R V+ E+ Y + V M S N+FRTL                     A+WPH+QLVYEFFL
Sbjct: 157  SRDVVTEAIYPEAVTMFSVNLFRTLPPSSNPTGAEFDPEEDEPTLEAAWPHLQLVYEFFL 216

Query: 756  RFLESPDFQPSIAKRYIDQKFVQQLLELFDSEDPRERDFLKTVLHRIYGKFLGLRAFIRK 935
            RFLESPDFQP+IAK+YIDQKFV  LL+LFDSEDPRERDFLKT+LHRIYGKFLGLRA+IR+
Sbjct: 217  RFLESPDFQPNIAKKYIDQKFVLALLDLFDSEDPRERDFLKTILHRIYGKFLGLRAYIRR 276

Query: 936  QINNIFLRFIYETEHFNGVAELLEILGSIINGFALPLKAEHKQFLMKVLIPMHTAKGLAL 1115
            QIN+IF RFIYETEH NG+AELLEILGSIINGFALPLK EHK FL++VL+P+H  K L++
Sbjct: 277  QINHIFYRFIYETEHHNGIAELLEILGSIINGFALPLKEEHKMFLIRVLLPLHKVKSLSV 336

Query: 1116 FHAQLAYCVVQFLEKDTTLTEPVIRGLLKFWPKTCSQKEVMFLGEIEEILDVIEPTQFKK 1295
            +H QLAYCVVQFLEK+++LTEPVI GLLKFWPKT S KEVMFL E+EEILDVIEP++F K
Sbjct: 337  YHPQLAYCVVQFLEKESSLTEPVIVGLLKFWPKTHSPKEVMFLNELEEILDVIEPSEFSK 396

Query: 1296 IEEPLFKQISKCVSSSHFQVAERALYFWNNEYILSLIEENIDKILPIMFGSLYKISKEHW 1475
            + EPLF+Q++KCVSS HFQVAERALY+WNNEYI+SLI +N  ++LPIMF +LY+ SK HW
Sbjct: 397  VMEPLFRQLAKCVSSPHFQVAERALYYWNNEYIMSLISDNAARVLPIMFPALYRNSKSHW 456

Query: 1476 NPTIVALVYNVLKTLMEMNGKLFDDLTSSY 1565
            N TI  L+YN LK  MEMN KLFDD T  Y
Sbjct: 457  NKTIHGLIYNALKLFMEMNQKLFDDCTQQY 486


>ref|NP_001076845.1| serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit
            gamma isoform [Bos taurus].
          Length = 524

 Score =  536 bits (1382), Expect = e-152
 Identities = 265/386 (68%), Positives = 310/386 (80%), Gaps = 4/386 (1%)
 Frame = +3

Query: 420  LPQLKDATSNEQQELFCQKLQQCCILFDFM-DSVSDLKSKEIKRATLNELVEYVSTNRGV 596
            L  ++D    +Q++LF QKL+QCC+LFDF+ D +SDLK KE+KRA L+E+VEY++ NR V
Sbjct: 27   LLHIRDVPPADQEKLFIQKLRQCCVLFDFVSDPLSDLKWKEVKRAALSEMVEYITHNRNV 86

Query: 597  IVESAYSDIVKMISANIFRTLXXXXXXXXXXXXXXXXXX---ASWPHIQLVYEFFLRFLE 767
            I E  Y ++V M + N+FRTL                     A+WPH+QLVYEFFLR LE
Sbjct: 87   ITEPIYPEVVHMFAVNMFRTLPPSSNPTGAEFDPEEDEPTLEAAWPHLQLVYEFFLRLLE 146

Query: 768  SPDFQPSIAKRYIDQKFVQQLLELFDSEDPRERDFLKTVLHRIYGKFLGLRAFIRKQINN 947
            SPDFQP+IAK+YIDQKFV QLLELFDSEDPRERDFLKT LHRIYGKFLGLRA+IRKQINN
Sbjct: 147  SPDFQPNIAKKYIDQKFVLQLLELFDSEDPRERDFLKTTLHRIYGKFLGLRAYIRKQINN 206

Query: 948  IFLRFIYETEHFNGVAELLEILGSIINGFALPLKAEHKQFLMKVLIPMHTAKGLALFHAQ 1127
            IF RFIYETEH NG+AELLEILGSIINGFALPLK EHK FL+KVL+P+H  K L+++H Q
Sbjct: 207  IFYRFIYETEHHNGIAELLEILGSIINGFALPLKEEHKIFLLKVLLPLHKVKSLSVYHPQ 266

Query: 1128 LAYCVVQFLEKDTTLTEPVIRGLLKFWPKTCSQKEVMFLGEIEEILDVIEPTQFKKIEEP 1307
            LAYCVVQFLEKD+TLTEPV+  LLK+WPKT S KEVMFL E+EEILDVIEP++F KI EP
Sbjct: 267  LAYCVVQFLEKDSTLTEPVVMALLKYWPKTHSPKEVMFLNELEEILDVIEPSEFVKIMEP 326

Query: 1308 LFKQISKCVSSSHFQVAERALYFWNNEYILSLIEENIDKILPIMFGSLYKISKEHWNPTI 1487
            LF+Q++KCVSS HFQVAERALY+WNNEYI+SLI +N  KILPIMF SLY+ SK HWN TI
Sbjct: 327  LFRQLAKCVSSPHFQVAERALYYWNNEYIMSLISDNAAKILPIMFPSLYRNSKTHWNKTI 386

Query: 1488 VALVYNVLKTLMEMNGKLFDDLTSSY 1565
              L+YN LK  MEMN KLFDD T  +
Sbjct: 387  HGLIYNALKLFMEMNQKLFDDCTQQF 412


>ref|XP_002684527.1| PREDICTED: protein phosphatase 2, regulatory subunit B, gamma-like
            isoform 2 [Bos taurus].
          Length = 485

 Score =  536 bits (1382), Expect = e-152
 Identities = 265/386 (68%), Positives = 310/386 (80%), Gaps = 4/386 (1%)
 Frame = +3

Query: 420  LPQLKDATSNEQQELFCQKLQQCCILFDFM-DSVSDLKSKEIKRATLNELVEYVSTNRGV 596
            L  ++D    +Q++LF QKL+QCC+LFDF+ D +SDLK KE+KRA L+E+VEY++ NR V
Sbjct: 27   LLHIRDVPPADQEKLFIQKLRQCCVLFDFVSDPLSDLKWKEVKRAALSEMVEYITHNRNV 86

Query: 597  IVESAYSDIVKMISANIFRTLXXXXXXXXXXXXXXXXXX---ASWPHIQLVYEFFLRFLE 767
            I E  Y ++V M + N+FRTL                     A+WPH+QLVYEFFLR LE
Sbjct: 87   ITEPIYPEVVHMFAVNMFRTLPPSSNPTGAEFDPEEDEPTLEAAWPHLQLVYEFFLRLLE 146

Query: 768  SPDFQPSIAKRYIDQKFVQQLLELFDSEDPRERDFLKTVLHRIYGKFLGLRAFIRKQINN 947
            SPDFQP+IAK+YIDQKFV QLLELFDSEDPRERDFLKT LHRIYGKFLGLRA+IRKQINN
Sbjct: 147  SPDFQPNIAKKYIDQKFVLQLLELFDSEDPRERDFLKTTLHRIYGKFLGLRAYIRKQINN 206

Query: 948  IFLRFIYETEHFNGVAELLEILGSIINGFALPLKAEHKQFLMKVLIPMHTAKGLALFHAQ 1127
            IF RFIYETEH NG+AELLEILGSIINGFALPLK EHK FL+KVL+P+H  K L+++H Q
Sbjct: 207  IFYRFIYETEHHNGIAELLEILGSIINGFALPLKEEHKIFLLKVLLPLHKVKSLSVYHPQ 266

Query: 1128 LAYCVVQFLEKDTTLTEPVIRGLLKFWPKTCSQKEVMFLGEIEEILDVIEPTQFKKIEEP 1307
            LAYCVVQFLEKD+TLTEPV+  LLK+WPKT S KEVMFL E+EEILDVIEP++F KI EP
Sbjct: 267  LAYCVVQFLEKDSTLTEPVVMALLKYWPKTHSPKEVMFLNELEEILDVIEPSEFVKIMEP 326

Query: 1308 LFKQISKCVSSSHFQVAERALYFWNNEYILSLIEENIDKILPIMFGSLYKISKEHWNPTI 1487
            LF+Q++KCVSS HFQVAERALY+WNNEYI+SLI +N  KILPIMF SLY+ SK HWN TI
Sbjct: 327  LFRQLAKCVSSPHFQVAERALYYWNNEYIMSLISDNAAKILPIMFPSLYRNSKTHWNKTI 386

Query: 1488 VALVYNVLKTLMEMNGKLFDDLTSSY 1565
              L+YN LK  MEMN KLFDD T  +
Sbjct: 387  HGLIYNALKLFMEMNQKLFDDCTQQF 412


>ref|XP_002684526.1| PREDICTED: protein phosphatase 2, regulatory subunit B, gamma-like
            isoform 1 [Bos taurus].
          Length = 524

 Score =  536 bits (1382), Expect = e-152
 Identities = 265/386 (68%), Positives = 310/386 (80%), Gaps = 4/386 (1%)
 Frame = +3

Query: 420  LPQLKDATSNEQQELFCQKLQQCCILFDFM-DSVSDLKSKEIKRATLNELVEYVSTNRGV 596
            L  ++D    +Q++LF QKL+QCC+LFDF+ D +SDLK KE+KRA L+E+VEY++ NR V
Sbjct: 27   LLHIRDVPPADQEKLFIQKLRQCCVLFDFVSDPLSDLKWKEVKRAALSEMVEYITHNRNV 86

Query: 597  IVESAYSDIVKMISANIFRTLXXXXXXXXXXXXXXXXXX---ASWPHIQLVYEFFLRFLE 767
            I E  Y ++V M + N+FRTL                     A+WPH+QLVYEFFLR LE
Sbjct: 87   ITEPIYPEVVHMFAVNMFRTLPPSSNPTGAEFDPEEDEPTLEAAWPHLQLVYEFFLRLLE 146

Query: 768  SPDFQPSIAKRYIDQKFVQQLLELFDSEDPRERDFLKTVLHRIYGKFLGLRAFIRKQINN 947
            SPDFQP+IAK+YIDQKFV QLLELFDSEDPRERDFLKT LHRIYGKFLGLRA+IRKQINN
Sbjct: 147  SPDFQPNIAKKYIDQKFVLQLLELFDSEDPRERDFLKTTLHRIYGKFLGLRAYIRKQINN 206

Query: 948  IFLRFIYETEHFNGVAELLEILGSIINGFALPLKAEHKQFLMKVLIPMHTAKGLALFHAQ 1127
            IF RFIYETEH NG+AELLEILGSIINGFALPLK EHK FL+KVL+P+H  K L+++H Q
Sbjct: 207  IFYRFIYETEHHNGIAELLEILGSIINGFALPLKEEHKIFLLKVLLPLHKVKSLSVYHPQ 266

Query: 1128 LAYCVVQFLEKDTTLTEPVIRGLLKFWPKTCSQKEVMFLGEIEEILDVIEPTQFKKIEEP 1307
            LAYCVVQFLEKD+TLTEPV+  LLK+WPKT S KEVMFL E+EEILDVIEP++F KI EP
Sbjct: 267  LAYCVVQFLEKDSTLTEPVVMALLKYWPKTHSPKEVMFLNELEEILDVIEPSEFVKIMEP 326

Query: 1308 LFKQISKCVSSSHFQVAERALYFWNNEYILSLIEENIDKILPIMFGSLYKISKEHWNPTI 1487
            LF+Q++KCVSS HFQVAERALY+WNNEYI+SLI +N  KILPIMF SLY+ SK HWN TI
Sbjct: 327  LFRQLAKCVSSPHFQVAERALYYWNNEYIMSLISDNAAKILPIMFPSLYRNSKTHWNKTI 386

Query: 1488 VALVYNVLKTLMEMNGKLFDDLTSSY 1565
              L+YN LK  MEMN KLFDD T  +
Sbjct: 387  HGLIYNALKLFMEMNQKLFDDCTQQF 412


  Database: RefSeq49_BP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 17,681,374
  Number of sequences in database:  33,088
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 67,321,337
Number of extensions: 1480671
Number of successful extensions: 4050
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 4034
Number of HSP's successfully gapped: 7
Length of query: 797
Length of database: 17,681,374
Length adjustment: 110
Effective length of query: 687
Effective length of database: 14,041,694
Effective search space: 9646643778
Effective search space used: 9646643778
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

Search to RefSeqCP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-002863
         (2392 letters)

Database: RefSeq49_CP.fasta 
           33,336 sequences; 18,874,504 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_547400.2| PREDICTED: similar to protein phosphatase 2, re...   757   0.0  
Alignment   gi|XP_537472.2| PREDICTED: similar to epsilon isoform of regula...   622   e-178
Alignment   gi|XP_865732.1| PREDICTED: similar to epsilon isoform of regula...   613   e-175
Alignment   gi|XP_865670.1| PREDICTED: similar to epsilon isoform of regula...   610   e-174
Alignment   gi|XP_865686.1| PREDICTED: similar to epsilon isoform of regula...   605   e-173
Alignment   gi|XP_865610.1| PREDICTED: similar to epsilon isoform of regula...   604   e-172
Alignment   gi|XP_865717.1| PREDICTED: similar to epsilon isoform of regula...   601   e-171
Alignment   gi|XP_540876.1| PREDICTED: similar to beta isoform of regulator...   593   e-169
Alignment   gi|XP_865702.1| PREDICTED: similar to epsilon isoform of regula...   578   e-165
Alignment   gi|XP_865623.1| PREDICTED: similar to epsilon isoform of regula...   561   e-160

>ref|XP_547400.2| PREDICTED: similar to protein phosphatase 2, regulatory subunit B
            (B56), alpha isoform [Canis familiaris].
          Length = 566

 Score =  757 bits (1954), Expect = 0.0
 Identities = 394/468 (84%), Positives = 394/468 (84%)
 Frame = +3

Query: 309  EKVDGFTRKSVXXXXXXXXXXXXXXXXXXXXXPELHPLPQLKDATSNEQQELFCQKLQQC 488
            EKVDGF RKSV                      ELHPLPQLKDATSNEQQELFCQKLQQC
Sbjct: 99   EKVDGFARKSVRKAQRQKRSQGSSQFRSQGSQAELHPLPQLKDATSNEQQELFCQKLQQC 158

Query: 489  CILFDFMDSVSDLKSKEIKRATLNELVEYVSTNRGVIVESAYSDIVKMISANIFRTLXXX 668
            CILFDFMDSVSDLKSKEIKRATLNELVEYVSTNRGVIVESAYSDIVKMISANIFRTL   
Sbjct: 159  CILFDFMDSVSDLKSKEIKRATLNELVEYVSTNRGVIVESAYSDIVKMISANIFRTLPPS 218

Query: 669  XXXXXXXXXXXXXXXASWPHIQLVYEFFLRFLESPDFQPSIAKRYIDQKFVQQLLELFDS 848
                           ASWPHIQLVYEFFLRFLESPDFQPSIAKRYIDQKFVQQLLELFDS
Sbjct: 219  DNPDFDPEEDEPTLEASWPHIQLVYEFFLRFLESPDFQPSIAKRYIDQKFVQQLLELFDS 278

Query: 849  EDPRERDFLKTVLHRIYGKFLGLRAFIRKQINNIFLRFIYETEHFNGVAELLEILGSIIN 1028
            EDPRERDFLKTVLHRIYGKFLGLRAFIRKQINNIFLRFIYETEHFNGVAELLEILGSIIN
Sbjct: 279  EDPRERDFLKTVLHRIYGKFLGLRAFIRKQINNIFLRFIYETEHFNGVAELLEILGSIIN 338

Query: 1029 GFALPLKAEHKQFLMKVLIPMHTAKGLALFHAQLAYCVVQFLEKDTTLTEPVIRGLLKFW 1208
            GFALPLKAEHKQFLMKVLIPMHTAKGLALFHAQLAYCVVQFLEKDTTLTEPVIRGLLKFW
Sbjct: 339  GFALPLKAEHKQFLMKVLIPMHTAKGLALFHAQLAYCVVQFLEKDTTLTEPVIRGLLKFW 398

Query: 1209 PKTCSQKEVMFLGEIEEILDVIEPTQFKKIEEPLFKQISKCVSSSHFQVAERALYFWNNE 1388
            PKTCSQKEVMFLGEIEEILDVIEPTQFKKIEEPLFKQISKCVSSSHFQVAERALYFWNNE
Sbjct: 399  PKTCSQKEVMFLGEIEEILDVIEPTQFKKIEEPLFKQISKCVSSSHFQVAERALYFWNNE 458

Query: 1389 YILSLIEENIDKILPIMFGSLYKISKEHWNPTIVALVYNVLKTLMEMNGKLFDDLTSSYX 1568
            YILSLIEENIDKILPIMFGSLYKISKEHWNPTIVALVYNVLKTLMEMNGKLFDDLTSSY 
Sbjct: 459  YILSLIEENIDKILPIMFGSLYKISKEHWNPTIVALVYNVLKTLMEMNGKLFDDLTSSYK 518

Query: 1569 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSAYNMHSILSNTSDE 1712
                                            NSAYNMHSILSNTSDE
Sbjct: 519  AERQREKKKELEREELWKKLEELKLKKALEKQNSAYNMHSILSNTSDE 566


>ref|XP_537472.2| PREDICTED: similar to epsilon isoform of regulatory subunit B56,
            protein phosphatase 2A isoform 1 [Canis familiaris].
          Length = 467

 Score =  622 bits (1603), Expect = e-178
 Identities = 306/419 (73%), Positives = 349/419 (83%)
 Frame = +3

Query: 309  EKVDGFTRKSVXXXXXXXXXXXXXXXXXXXXXPELHPLPQLKDATSNEQQELFCQKLQQC 488
            +KVDGF+RKSV                      EL PLP LKD  S+EQ ELF +KLQQC
Sbjct: 12   DKVDGFSRKSVRKARQKRSQSSSQFRSQGKPI-ELTPLPLLKDVPSSEQPELFLKKLQQC 70

Query: 489  CILFDFMDSVSDLKSKEIKRATLNELVEYVSTNRGVIVESAYSDIVKMISANIFRTLXXX 668
            C++FDFMD++SDLK KE KR+TLNELV+Y++ +RG + E  Y ++V+M+S NIFRTL   
Sbjct: 71   CVIFDFMDTLSDLKMKEYKRSTLNELVDYITISRGCLTEQTYPEVVRMVSCNIFRTLPPS 130

Query: 669  XXXXXXXXXXXXXXXASWPHIQLVYEFFLRFLESPDFQPSIAKRYIDQKFVQQLLELFDS 848
                           ASWPH+QLVYEFF+RFLES +FQPSIAK+YIDQKFV QLLELFDS
Sbjct: 131  DSNEFDPEEDEPTLEASWPHLQLVYEFFIRFLESQEFQPSIAKKYIDQKFVLQLLELFDS 190

Query: 849  EDPRERDFLKTVLHRIYGKFLGLRAFIRKQINNIFLRFIYETEHFNGVAELLEILGSIIN 1028
            EDPRERD+LKTVLHRIYGKFLGLRAFIRKQINNIFLRF+YETEHFNGVAELLEILGSIIN
Sbjct: 191  EDPRERDYLKTVLHRIYGKFLGLRAFIRKQINNIFLRFVYETEHFNGVAELLEILGSIIN 250

Query: 1029 GFALPLKAEHKQFLMKVLIPMHTAKGLALFHAQLAYCVVQFLEKDTTLTEPVIRGLLKFW 1208
            GFALPLKAEHKQFL+KVLIP+HT + L+LFHAQLAYC+VQFLEKD +LTEPVIRGL+KFW
Sbjct: 251  GFALPLKAEHKQFLVKVLIPLHTVRSLSLFHAQLAYCIVQFLEKDPSLTEPVIRGLMKFW 310

Query: 1209 PKTCSQKEVMFLGEIEEILDVIEPTQFKKIEEPLFKQISKCVSSSHFQVAERALYFWNNE 1388
            PKTCSQKEVMFLGE+EEILDVIEP+QF KI+EPLFKQI+KCVSS HFQVAERALY+WNNE
Sbjct: 311  PKTCSQKEVMFLGELEEILDVIEPSQFVKIQEPLFKQIAKCVSSPHFQVAERALYYWNNE 370

Query: 1389 YILSLIEENIDKILPIMFGSLYKISKEHWNPTIVALVYNVLKTLMEMNGKLFDDLTSSY 1565
            YI+SLIEEN + ILPIMF SLY+ISKEHWNP IVALVYNVLK  MEMN  +FD+LT++Y
Sbjct: 371  YIMSLIEENSNVILPIMFSSLYRISKEHWNPAIVALVYNVLKAFMEMNSTMFDELTATY 429


>ref|XP_865732.1| PREDICTED: similar to epsilon isoform of regulatory subunit B56,
            protein phosphatase 2A isoform 10 [Canis familiaris].
          Length = 468

 Score =  613 bits (1580), Expect = e-175
 Identities = 304/420 (72%), Positives = 347/420 (82%), Gaps = 1/420 (0%)
 Frame = +3

Query: 309  EKVDGFTRKSVXXXXXXXXXXXXXXXXXXXXXPELHPLPQLKDATSNEQQELFCQKLQQC 488
            +KVDGF+RKSV                      EL PLP LKD  S+EQ ELF +KLQQC
Sbjct: 12   DKVDGFSRKSVRKARQKRSQSSSQFRSQGKPI-ELTPLPLLKDVPSSEQPELFLKKLQQC 70

Query: 489  CILFDFMDSVSDLKSKEIKRATLNELVEYVSTNRGVIVESAYSDIVKMI-SANIFRTLXX 665
            C++FDFMD++SDLK KE KR+TLNELV+Y++ +RG + E  Y ++  ++ S NIFRTL  
Sbjct: 71   CVIFDFMDTLSDLKMKEYKRSTLNELVDYITISRGCLTEQTYPEVCNIVVSCNIFRTLPP 130

Query: 666  XXXXXXXXXXXXXXXXASWPHIQLVYEFFLRFLESPDFQPSIAKRYIDQKFVQQLLELFD 845
                            ASWPH+QLVYEFF+RFLES +FQPSIAK+YIDQKFV QLLELFD
Sbjct: 131  SDSNEFDPEEDEPTLEASWPHLQLVYEFFIRFLESQEFQPSIAKKYIDQKFVLQLLELFD 190

Query: 846  SEDPRERDFLKTVLHRIYGKFLGLRAFIRKQINNIFLRFIYETEHFNGVAELLEILGSII 1025
            SEDPRERD+LKTVLHRIYGKFLGLRAFIRKQINNIFLRF+YETEHFNGVAELLEILGSII
Sbjct: 191  SEDPRERDYLKTVLHRIYGKFLGLRAFIRKQINNIFLRFVYETEHFNGVAELLEILGSII 250

Query: 1026 NGFALPLKAEHKQFLMKVLIPMHTAKGLALFHAQLAYCVVQFLEKDTTLTEPVIRGLLKF 1205
            NGFALPLKAEHKQFL+KVLIP+HT + L+LFHAQLAYC+VQFLEKD +LTEPVIRGL+KF
Sbjct: 251  NGFALPLKAEHKQFLVKVLIPLHTVRSLSLFHAQLAYCIVQFLEKDPSLTEPVIRGLMKF 310

Query: 1206 WPKTCSQKEVMFLGEIEEILDVIEPTQFKKIEEPLFKQISKCVSSSHFQVAERALYFWNN 1385
            WPKTCSQKEVMFLGE+EEILDVIEP+QF KI+EPLFKQI+KCVSS HFQVAERALY+WNN
Sbjct: 311  WPKTCSQKEVMFLGELEEILDVIEPSQFVKIQEPLFKQIAKCVSSPHFQVAERALYYWNN 370

Query: 1386 EYILSLIEENIDKILPIMFGSLYKISKEHWNPTIVALVYNVLKTLMEMNGKLFDDLTSSY 1565
            EYI+SLIEEN + ILPIMF SLY+ISKEHWNP IVALVYNVLK  MEMN  +FD+LT++Y
Sbjct: 371  EYIMSLIEENSNVILPIMFSSLYRISKEHWNPAIVALVYNVLKAFMEMNSTMFDELTATY 430


>ref|XP_865670.1| PREDICTED: similar to epsilon isoform of regulatory subunit B56,
            protein phosphatase 2A isoform 6 [Canis familiaris].
          Length = 487

 Score =  610 bits (1572), Expect = e-174
 Identities = 306/439 (69%), Positives = 349/439 (79%), Gaps = 20/439 (4%)
 Frame = +3

Query: 309  EKVDGFTRKSVXXXXXXXXXXXXXXXXXXXXXPELHPLPQLKDATSNEQQELFCQKLQQC 488
            +KVDGF+RKSV                      EL PLP LKD  S+EQ ELF +KLQQC
Sbjct: 12   DKVDGFSRKSVRKARQKRSQSSSQFRSQGKPI-ELTPLPLLKDVPSSEQPELFLKKLQQC 70

Query: 489  CILFDFMDSVSDLKSKEIKRATLNELVEYVSTNRGVIVESAYSDIVKMISANIFRTLXXX 668
            C++FDFMD++SDLK KE KR+TLNELV+Y++ +RG + E  Y ++V+M+S NIFRTL   
Sbjct: 71   CVIFDFMDTLSDLKMKEYKRSTLNELVDYITISRGCLTEQTYPEVVRMVSCNIFRTLPPS 130

Query: 669  XXXXXXXXXXXXXXXASWPHIQLVYEFFLRFLESPDFQPSIAKRYIDQKFVQQLLELFDS 848
                           ASWPH+QLVYEFF+RFLES +FQPSIAK+YIDQKFV QLLELFDS
Sbjct: 131  DSNEFDPEEDEPTLEASWPHLQLVYEFFIRFLESQEFQPSIAKKYIDQKFVLQLLELFDS 190

Query: 849  EDPRERDFLKTVLHRIYGKFLGLRAFIRKQINNIFLRFIYETEHFNGVAELLEILGSIIN 1028
            EDPRERD+LKTVLHRIYGKFLGLRAFIRKQINNIFLRF+YETEHFNGVAELLEILGSIIN
Sbjct: 191  EDPRERDYLKTVLHRIYGKFLGLRAFIRKQINNIFLRFVYETEHFNGVAELLEILGSIIN 250

Query: 1029 GFALPLKAEHKQFLMKVLIPMHTAKGLALFHAQLAYCVVQFLEKDTTLTEP--------- 1181
            GFALPLKAEHKQFL+KVLIP+HT + L+LFHAQLAYC+VQFLEKD +LTEP         
Sbjct: 251  GFALPLKAEHKQFLVKVLIPLHTVRSLSLFHAQLAYCIVQFLEKDPSLTEPVSIFAVISK 310

Query: 1182 -----------VIRGLLKFWPKTCSQKEVMFLGEIEEILDVIEPTQFKKIEEPLFKQISK 1328
                       VIRGL+KFWPKTCSQKEVMFLGE+EEILDVIEP+QF KI+EPLFKQI+K
Sbjct: 311  SFKMTTFHEVHVIRGLMKFWPKTCSQKEVMFLGELEEILDVIEPSQFVKIQEPLFKQIAK 370

Query: 1329 CVSSSHFQVAERALYFWNNEYILSLIEENIDKILPIMFGSLYKISKEHWNPTIVALVYNV 1508
            CVSS HFQVAERALY+WNNEYI+SLIEEN + ILPIMF SLY+ISKEHWNP IVALVYNV
Sbjct: 371  CVSSPHFQVAERALYYWNNEYIMSLIEENSNVILPIMFSSLYRISKEHWNPAIVALVYNV 430

Query: 1509 LKTLMEMNGKLFDDLTSSY 1565
            LK  MEMN  +FD+LT++Y
Sbjct: 431  LKAFMEMNSTMFDELTATY 449


>ref|XP_865686.1| PREDICTED: similar to epsilon isoform of regulatory subunit B56,
            protein phosphatase 2A isoform 7 [Canis familiaris].
          Length = 477

 Score =  605 bits (1560), Expect = e-173
 Identities = 302/429 (70%), Positives = 346/429 (80%), Gaps = 10/429 (2%)
 Frame = +3

Query: 309  EKVDGFTRKSVXXXXXXXXXXXXXXXXXXXXXPELHPLPQLKDATSNEQQELFCQKLQQC 488
            +KVDGF+RKSV                      EL PLP LKD  S+EQ ELF +KLQQC
Sbjct: 12   DKVDGFSRKSVRKARQKRSQSSSQFRSQGKPI-ELTPLPLLKDVPSSEQPELFLKKLQQC 70

Query: 489  CILFDFMDSVSDLKSKEIKRATLNELVEYVSTNRGVIVESAYSDIVKMISANIFRTLXXX 668
            C++FDFMD++SDLK KE KR+TLNELV+Y++ +RG + E  Y ++V+M+S NIFRTL   
Sbjct: 71   CVIFDFMDTLSDLKMKEYKRSTLNELVDYITISRGCLTEQTYPEVVRMVSCNIFRTLPPS 130

Query: 669  XXXXXXXXXXXXXXXASWPHIQLVYEFFLRFLESPDFQPSIAKRYIDQKFVQQLLELFDS 848
                           ASWPH+QLVYEFF+RFLES +FQPSIAK+YIDQKFV QLLELFDS
Sbjct: 131  DSNEFDPEEDEPTLEASWPHLQLVYEFFIRFLESQEFQPSIAKKYIDQKFVLQLLELFDS 190

Query: 849  EDPRERDFLKTVLHRIYGKFLGLRAFIRKQINNIFLRFIYETEHFNGVAELLEILGSIIN 1028
            EDPRERD+LKTVLHRIYGKFLGLRAFIRKQINNIFLRF+YETEHFNGVAELLEILGSIIN
Sbjct: 191  EDPRERDYLKTVLHRIYGKFLGLRAFIRKQINNIFLRFVYETEHFNGVAELLEILGSIIN 250

Query: 1029 GFALPLKAEHKQFLMKVLIPMHTAKGLALFHAQLAYCVVQFLEKDTTLTEPVIRGLLKFW 1208
            GFALPLKAEHKQFL+KVLIP+HT + L+LFHAQLAYC+VQFLEKD +LTEPVIRGL+KFW
Sbjct: 251  GFALPLKAEHKQFLVKVLIPLHTVRSLSLFHAQLAYCIVQFLEKDPSLTEPVIRGLMKFW 310

Query: 1209 PKTCSQ----------KEVMFLGEIEEILDVIEPTQFKKIEEPLFKQISKCVSSSHFQVA 1358
            PKTC+             VMFLGE+EEILDVIEP+QF KI+EPLFKQI+KCVSS HFQVA
Sbjct: 311  PKTCTGTVNISRLSTCATVMFLGELEEILDVIEPSQFVKIQEPLFKQIAKCVSSPHFQVA 370

Query: 1359 ERALYFWNNEYILSLIEENIDKILPIMFGSLYKISKEHWNPTIVALVYNVLKTLMEMNGK 1538
            ERALY+WNNEYI+SLIEEN + ILPIMF SLY+ISKEHWNP IVALVYNVLK  MEMN  
Sbjct: 371  ERALYYWNNEYIMSLIEENSNVILPIMFSSLYRISKEHWNPAIVALVYNVLKAFMEMNST 430

Query: 1539 LFDDLTSSY 1565
            +FD+LT++Y
Sbjct: 431  MFDELTATY 439


>ref|XP_865610.1| PREDICTED: similar to epsilon isoform of regulatory subunit B56,
            protein phosphatase 2A isoform 2 [Canis familiaris].
          Length = 497

 Score =  604 bits (1558), Expect = e-172
 Identities = 307/449 (68%), Positives = 350/449 (77%), Gaps = 30/449 (6%)
 Frame = +3

Query: 309  EKVDGFTRKSVXXXXXXXXXXXXXXXXXXXXXPELHPLPQLKDATSNEQQELFCQKLQQC 488
            +KVDGF+RKSV                      EL PLP LKD  S+EQ ELF +KLQQC
Sbjct: 12   DKVDGFSRKSVRKARQKRSQSSSQFRSQGKPI-ELTPLPLLKDVPSSEQPELFLKKLQQC 70

Query: 489  CILFDFMDSVSDLKSKEIKRATLNELVEYVSTNRGVIVESAYSDIVKMISANIFRTLXXX 668
            C++FDFMD++SDLK KE KR+TLNELV+Y++ +RG + E  Y ++V+M+S NIFRTL   
Sbjct: 71   CVIFDFMDTLSDLKMKEYKRSTLNELVDYITISRGCLTEQTYPEVVRMVSCNIFRTLPPS 130

Query: 669  XXXXXXXXXXXXXXXASWPHIQLVYEFFLRFLESPDFQPSIAKRYIDQKFV--------- 821
                           ASWPH+QLVYEFF+RFLES +FQPSIAK+YIDQKFV         
Sbjct: 131  DSNEFDPEEDEPTLEASWPHLQLVYEFFIRFLESQEFQPSIAKKYIDQKFVLQVSQDILF 190

Query: 822  -----------------QQLLELFDSEDPRERDFLKTVLHRIYGKFLGLRAFIRKQINNI 950
                             QQLLELFDSEDPRERD+LKTVLHRIYGKFLGLRAFIRKQINNI
Sbjct: 191  FLIPILILKSLYAVFHLQQLLELFDSEDPRERDYLKTVLHRIYGKFLGLRAFIRKQINNI 250

Query: 951  FLRFIYETEHFNGVAELLEILGSIINGFALPLKAEHKQFLMKVLIPMHTAKGLALFHAQ- 1127
            FLRF+YETEHFNGVAELLEILGSIINGFALPLKAEHKQFL+KVLIP+HT + L+LFHAQ 
Sbjct: 251  FLRFVYETEHFNGVAELLEILGSIINGFALPLKAEHKQFLVKVLIPLHTVRSLSLFHAQV 310

Query: 1128 ---LAYCVVQFLEKDTTLTEPVIRGLLKFWPKTCSQKEVMFLGEIEEILDVIEPTQFKKI 1298
               LAYC+VQFLEKD +LTEPVIRGL+KFWPKTCSQKEVMFLGE+EEILDVIEP+QF KI
Sbjct: 311  EFYLAYCIVQFLEKDPSLTEPVIRGLMKFWPKTCSQKEVMFLGELEEILDVIEPSQFVKI 370

Query: 1299 EEPLFKQISKCVSSSHFQVAERALYFWNNEYILSLIEENIDKILPIMFGSLYKISKEHWN 1478
            +EPLFKQI+KCVSS HFQVAERALY+WNNEYI+SLIEEN + ILPIMF SLY+ISKEHWN
Sbjct: 371  QEPLFKQIAKCVSSPHFQVAERALYYWNNEYIMSLIEENSNVILPIMFSSLYRISKEHWN 430

Query: 1479 PTIVALVYNVLKTLMEMNGKLFDDLTSSY 1565
            P IVALVYNVLK  MEMN  +FD+LT++Y
Sbjct: 431  PAIVALVYNVLKAFMEMNSTMFDELTATY 459


>ref|XP_865717.1| PREDICTED: similar to epsilon isoform of regulatory subunit B56,
            protein phosphatase 2A isoform 9 [Canis familiaris].
          Length = 460

 Score =  601 bits (1549), Expect = e-171
 Identities = 300/419 (71%), Positives = 342/419 (81%)
 Frame = +3

Query: 309  EKVDGFTRKSVXXXXXXXXXXXXXXXXXXXXXPELHPLPQLKDATSNEQQELFCQKLQQC 488
            +KVDGF+RKSV                      EL PLP LKD  S+EQ ELF +KLQQC
Sbjct: 12   DKVDGFSRKSVRKARQKRSQSSSQFRSQGKPI-ELTPLPLLKDVPSSEQPELFLKKLQQC 70

Query: 489  CILFDFMDSVSDLKSKEIKRATLNELVEYVSTNRGVIVESAYSDIVKMISANIFRTLXXX 668
            C++FDFMD++SDLK KE KR+TLNELV+Y++ +RG + E  Y ++V+M+S NIFRTL   
Sbjct: 71   CVIFDFMDTLSDLKMKEYKRSTLNELVDYITISRGCLTEQTYPEVVRMVSCNIFRTLPPS 130

Query: 669  XXXXXXXXXXXXXXXASWPHIQLVYEFFLRFLESPDFQPSIAKRYIDQKFVQQLLELFDS 848
                           ASWPH+QLVYEFF+RFLES +FQPSIAK+YIDQKFV QLLELFDS
Sbjct: 131  DSNEFDPEEDEPTLEASWPHLQLVYEFFIRFLESQEFQPSIAKKYIDQKFVLQLLELFDS 190

Query: 849  EDPRERDFLKTVLHRIYGKFLGLRAFIRKQINNIFLRFIYETEHFNGVAELLEILGSIIN 1028
            EDPRERD+LKTVLHRIYGKFLGLRAFIRKQINNIFLRF+YETEHFNGVAELLEILGSIIN
Sbjct: 191  EDPRERDYLKTVLHRIYGKFLGLRAFIRKQINNIFLRFVYETEHFNGVAELLEILGSIIN 250

Query: 1029 GFALPLKAEHKQFLMKVLIPMHTAKGLALFHAQLAYCVVQFLEKDTTLTEPVIRGLLKFW 1208
            GFALPLKAEHKQFL+KVLIP+HT + L+LFHA       QFLEKD +LTEPVIRGL+KFW
Sbjct: 251  GFALPLKAEHKQFLVKVLIPLHTVRSLSLFHA-------QFLEKDPSLTEPVIRGLMKFW 303

Query: 1209 PKTCSQKEVMFLGEIEEILDVIEPTQFKKIEEPLFKQISKCVSSSHFQVAERALYFWNNE 1388
            PKTCSQKEVMFLGE+EEILDVIEP+QF KI+EPLFKQI+KCVSS HFQVAERALY+WNNE
Sbjct: 304  PKTCSQKEVMFLGELEEILDVIEPSQFVKIQEPLFKQIAKCVSSPHFQVAERALYYWNNE 363

Query: 1389 YILSLIEENIDKILPIMFGSLYKISKEHWNPTIVALVYNVLKTLMEMNGKLFDDLTSSY 1565
            YI+SLIEEN + ILPIMF SLY+ISKEHWNP IVALVYNVLK  MEMN  +FD+LT++Y
Sbjct: 364  YIMSLIEENSNVILPIMFSSLYRISKEHWNPAIVALVYNVLKAFMEMNSTMFDELTATY 422


>ref|XP_540876.1| PREDICTED: similar to beta isoform of regulatory subunit B56, protein
            phosphatase 2A isoform 1 [Canis familiaris].
          Length = 497

 Score =  593 bits (1529), Expect = e-169
 Identities = 290/419 (69%), Positives = 341/419 (81%)
 Frame = +3

Query: 309  EKVDGFTRKSVXXXXXXXXXXXXXXXXXXXXXPELHPLPQLKDATSNEQQELFCQKLQQC 488
            +KVDGF+R+S+                      EL PLP LKD  ++E  EL  +KL QC
Sbjct: 26   DKVDGFSRRSLRRARPRRSHSSSQFRYQSNQQ-ELTPLPLLKDVPASELHELLSRKLAQC 84

Query: 489  CILFDFMDSVSDLKSKEIKRATLNELVEYVSTNRGVIVESAYSDIVKMISANIFRTLXXX 668
             ++FDF+D V+DLK KE+KRA LNELVE V + RGV++E  Y DI++MIS NIFRTL   
Sbjct: 85   GVMFDFLDCVADLKGKEVKRAALNELVECVGSTRGVLIEPVYPDIIRMISVNIFRTLPPS 144

Query: 669  XXXXXXXXXXXXXXXASWPHIQLVYEFFLRFLESPDFQPSIAKRYIDQKFVQQLLELFDS 848
                            SWPH+QLVYEFFLRFLESPDFQPS+AKRY+DQKFV  LLELFDS
Sbjct: 145  ENPEFDPEEDEPNLEPSWPHLQLVYEFFLRFLESPDFQPSVAKRYVDQKFVLMLLELFDS 204

Query: 849  EDPRERDFLKTVLHRIYGKFLGLRAFIRKQINNIFLRFIYETEHFNGVAELLEILGSIIN 1028
            EDPRER++LKT+LHR+YGKFLGLRA+IRKQ ++IFLRFIYE EHFNGVAELLEILGSIIN
Sbjct: 205  EDPREREYLKTILHRVYGKFLGLRAYIRKQCSHIFLRFIYEFEHFNGVAELLEILGSIIN 264

Query: 1029 GFALPLKAEHKQFLMKVLIPMHTAKGLALFHAQLAYCVVQFLEKDTTLTEPVIRGLLKFW 1208
            GFALPLK EHKQFL++VLIP+H+ K L++FHAQLAYCVVQFLEKD TLTE VIRGLLK+W
Sbjct: 265  GFALPLKTEHKQFLVRVLIPLHSVKSLSVFHAQLAYCVVQFLEKDATLTEHVIRGLLKYW 324

Query: 1209 PKTCSQKEVMFLGEIEEILDVIEPTQFKKIEEPLFKQISKCVSSSHFQVAERALYFWNNE 1388
            PKTC+QKEVMFLGE+EEILDVIEP+QF KI+EPLFKQ+++CVSS HFQVAERALYFWNNE
Sbjct: 325  PKTCTQKEVMFLGEMEEILDVIEPSQFVKIQEPLFKQVARCVSSPHFQVAERALYFWNNE 384

Query: 1389 YILSLIEENIDKILPIMFGSLYKISKEHWNPTIVALVYNVLKTLMEMNGKLFDDLTSSY 1565
            YILSLIE+N   +LP +FG+LY++SKEHWN TIV+L+YNVLKT MEMNGKLFD+LT+SY
Sbjct: 385  YILSLIEDNCHTVLPAVFGTLYQVSKEHWNQTIVSLIYNVLKTFMEMNGKLFDELTASY 443


>ref|XP_865702.1| PREDICTED: similar to epsilon isoform of regulatory subunit B56,
            protein phosphatase 2A isoform 8 [Canis familiaris].
          Length = 449

 Score =  578 bits (1491), Expect = e-165
 Identities = 291/419 (69%), Positives = 332/419 (79%)
 Frame = +3

Query: 309  EKVDGFTRKSVXXXXXXXXXXXXXXXXXXXXXPELHPLPQLKDATSNEQQELFCQKLQQC 488
            +KVDGF+RKSV                      EL PLP LKD  S+EQ ELF +KLQQC
Sbjct: 12   DKVDGFSRKSVRKARQKRSQSSSQFRSQGKPI-ELTPLPLLKDVPSSEQPELFLKKLQQC 70

Query: 489  CILFDFMDSVSDLKSKEIKRATLNELVEYVSTNRGVIVESAYSDIVKMISANIFRTLXXX 668
            C++FDFMD++SDLK KE KR+TLNELV+Y++ +RG + E  Y ++V+M+S NIFRTL   
Sbjct: 71   CVIFDFMDTLSDLKMKEYKRSTLNELVDYITISRGCLTEQTYPEVVRMVSCNIFRTLPPS 130

Query: 669  XXXXXXXXXXXXXXXASWPHIQLVYEFFLRFLESPDFQPSIAKRYIDQKFVQQLLELFDS 848
                           ASWPH+QLVYEFF+RFLES +FQPSIAK+YIDQKFV QLLELFDS
Sbjct: 131  DSNEFDPEEDEPTLEASWPHLQLVYEFFIRFLESQEFQPSIAKKYIDQKFVLQLLELFDS 190

Query: 849  EDPRERDFLKTVLHRIYGKFLGLRAFIRKQINNIFLRFIYETEHFNGVAELLEILGSIIN 1028
            EDPRERD+LKTVLHRIYGKFLGLRAFIRKQINNIFLRF+YETEHFNGVAELLEILGSIIN
Sbjct: 191  EDPRERDYLKTVLHRIYGKFLGLRAFIRKQINNIFLRFVYETEHFNGVAELLEILGSIIN 250

Query: 1029 GFALPLKAEHKQFLMKVLIPMHTAKGLALFHAQLAYCVVQFLEKDTTLTEPVIRGLLKFW 1208
            GFALPLKAEHKQFL+KVLIP+HT + L+LFHAQ                  VIRGL+KFW
Sbjct: 251  GFALPLKAEHKQFLVKVLIPLHTVRSLSLFHAQ------------------VIRGLMKFW 292

Query: 1209 PKTCSQKEVMFLGEIEEILDVIEPTQFKKIEEPLFKQISKCVSSSHFQVAERALYFWNNE 1388
            PKTCSQKEVMFLGE+EEILDVIEP+QF KI+EPLFKQI+KCVSS HFQVAERALY+WNNE
Sbjct: 293  PKTCSQKEVMFLGELEEILDVIEPSQFVKIQEPLFKQIAKCVSSPHFQVAERALYYWNNE 352

Query: 1389 YILSLIEENIDKILPIMFGSLYKISKEHWNPTIVALVYNVLKTLMEMNGKLFDDLTSSY 1565
            YI+SLIEEN + ILPIMF SLY+ISKEHWNP IVALVYNVLK  MEMN  +FD+LT++Y
Sbjct: 353  YIMSLIEENSNVILPIMFSSLYRISKEHWNPAIVALVYNVLKAFMEMNSTMFDELTATY 411


>ref|XP_865623.1| PREDICTED: similar to epsilon isoform of regulatory subunit B56,
            protein phosphatase 2A isoform 3 [Canis familiaris].
          Length = 439

 Score =  561 bits (1447), Expect = e-160
 Identities = 285/419 (68%), Positives = 324/419 (77%)
 Frame = +3

Query: 309  EKVDGFTRKSVXXXXXXXXXXXXXXXXXXXXXPELHPLPQLKDATSNEQQELFCQKLQQC 488
            +KVDGF+RKSV                      EL PLP LKD  S+EQ ELF +KLQQC
Sbjct: 12   DKVDGFSRKSVRKARQKRSQSSSQFRSQGKPI-ELTPLPLLKDVPSSEQPELFLKKLQQC 70

Query: 489  CILFDFMDSVSDLKSKEIKRATLNELVEYVSTNRGVIVESAYSDIVKMISANIFRTLXXX 668
            C++FDFMD++SDLK KE KR+TLNELV+Y++ +RG + E  Y ++V+M+S NIFRTL   
Sbjct: 71   CVIFDFMDTLSDLKMKEYKRSTLNELVDYITISRGCLTEQTYPEVVRMVSCNIFRTLPPS 130

Query: 669  XXXXXXXXXXXXXXXASWPHIQLVYEFFLRFLESPDFQPSIAKRYIDQKFVQQLLELFDS 848
                           ASWPH+QLVYEFF+RFLES +FQPSIAK+YIDQKFV QLLELFDS
Sbjct: 131  DSNEFDPEEDEPTLEASWPHLQLVYEFFIRFLESQEFQPSIAKKYIDQKFVLQLLELFDS 190

Query: 849  EDPRERDFLKTVLHRIYGKFLGLRAFIRKQINNIFLRFIYETEHFNGVAELLEILGSIIN 1028
            EDPRERD+LKTVLHRIYGKFLGLRAFIRKQINNIFLRF+YETEHFNGVAELLEILGSIIN
Sbjct: 191  EDPRERDYLKTVLHRIYGKFLGLRAFIRKQINNIFLRFVYETEHFNGVAELLEILGSIIN 250

Query: 1029 GFALPLKAEHKQFLMKVLIPMHTAKGLALFHAQLAYCVVQFLEKDTTLTEPVIRGLLKFW 1208
            GFALPLKAEHKQFL+KVLIP+HT                            VIRGL+KFW
Sbjct: 251  GFALPLKAEHKQFLVKVLIPLHT----------------------------VIRGLMKFW 282

Query: 1209 PKTCSQKEVMFLGEIEEILDVIEPTQFKKIEEPLFKQISKCVSSSHFQVAERALYFWNNE 1388
            PKTCSQKEVMFLGE+EEILDVIEP+QF KI+EPLFKQI+KCVSS HFQVAERALY+WNNE
Sbjct: 283  PKTCSQKEVMFLGELEEILDVIEPSQFVKIQEPLFKQIAKCVSSPHFQVAERALYYWNNE 342

Query: 1389 YILSLIEENIDKILPIMFGSLYKISKEHWNPTIVALVYNVLKTLMEMNGKLFDDLTSSY 1565
            YI+SLIEEN + ILPIMF SLY+ISKEHWNP IVALVYNVLK  MEMN  +FD+LT++Y
Sbjct: 343  YIMSLIEENSNVILPIMFSSLYRISKEHWNPAIVALVYNVLKAFMEMNSTMFDELTATY 401


  Database: RefSeq49_CP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,874,504
  Number of sequences in database:  33,336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 70,114,495
Number of extensions: 1515562
Number of successful extensions: 4252
Number of sequences better than 1.0e-05: 27
Number of HSP's gapped: 4191
Number of HSP's successfully gapped: 27
Length of query: 797
Length of database: 18,874,504
Length adjustment: 111
Effective length of query: 686
Effective length of database: 15,174,208
Effective search space: 10409506688
Effective search space used: 10409506688
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

Search to RefSeqHP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-002863
         (2392 letters)

Database: RefSeq49_HP.fasta 
           32,964 sequences; 18,297,164 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_006234.1| serine/threonine-protein phosphatase 2A 56 kDa ...   753   0.0  
Alignment   gi|NP_001186685.1| serine/threonine-protein phosphatase 2A 56 k...   720   0.0  
Alignment   gi|NP_006237.1| serine/threonine-protein phosphatase 2A 56 kDa ...   622   e-178
Alignment   gi|NP_006235.1| serine/threonine-protein phosphatase 2A 56 kDa ...   595   e-170
Alignment   gi|NP_001155198.1| serine/threonine-protein phosphatase 2A 56 k...   548   e-155
Alignment   gi|NP_006236.1| serine/threonine-protein phosphatase 2A 56 kDa ...   544   e-154
Alignment   gi|NP_848702.1| serine/threonine-protein phosphatase 2A 56 kDa ...   539   e-153
Alignment   gi|NP_848701.1| serine/threonine-protein phosphatase 2A 56 kDa ...   539   e-153
Alignment   gi|NP_002710.2| serine/threonine-protein phosphatase 2A 56 kDa ...   539   e-153
Alignment   gi|NP_001155197.1| serine/threonine-protein phosphatase 2A 56 k...   538   e-153

>ref|NP_006234.1| serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit
            alpha isoform isoform 1 [Homo sapiens].
          Length = 486

 Score =  753 bits (1945), Expect = 0.0
 Identities = 393/468 (83%), Positives = 393/468 (83%)
 Frame = +3

Query: 309  EKVDGFTRKSVXXXXXXXXXXXXXXXXXXXXXPELHPLPQLKDATSNEQQELFCQKLQQC 488
            EKVDGFTRKSV                      ELHPLPQLKDATSNEQQELFCQKLQQC
Sbjct: 19   EKVDGFTRKSVRKAQRQKRSQGSSQFRSQGSQAELHPLPQLKDATSNEQQELFCQKLQQC 78

Query: 489  CILFDFMDSVSDLKSKEIKRATLNELVEYVSTNRGVIVESAYSDIVKMISANIFRTLXXX 668
            CILFDFMDSVSDLKSKEIKRATLNELVEYVSTNRGVIVESAYSDIVKMISANIFRTL   
Sbjct: 79   CILFDFMDSVSDLKSKEIKRATLNELVEYVSTNRGVIVESAYSDIVKMISANIFRTLPPS 138

Query: 669  XXXXXXXXXXXXXXXASWPHIQLVYEFFLRFLESPDFQPSIAKRYIDQKFVQQLLELFDS 848
                           ASWPHIQLVYEFFLRFLESPDFQPSIAKRYIDQKFVQQLLELFDS
Sbjct: 139  DNPDFDPEEDEPTLEASWPHIQLVYEFFLRFLESPDFQPSIAKRYIDQKFVQQLLELFDS 198

Query: 849  EDPRERDFLKTVLHRIYGKFLGLRAFIRKQINNIFLRFIYETEHFNGVAELLEILGSIIN 1028
            EDPRERDFLKTVLHRIYGKFLGLRAFIRKQINNIFLRFIYETEHFNGVAELLEILGSIIN
Sbjct: 199  EDPRERDFLKTVLHRIYGKFLGLRAFIRKQINNIFLRFIYETEHFNGVAELLEILGSIIN 258

Query: 1029 GFALPLKAEHKQFLMKVLIPMHTAKGLALFHAQLAYCVVQFLEKDTTLTEPVIRGLLKFW 1208
            GFALPLKAEHKQFLMKVLIPMHTAKGLALFHAQLAYCVVQFLEKDTTLTEPVIRGLLKFW
Sbjct: 259  GFALPLKAEHKQFLMKVLIPMHTAKGLALFHAQLAYCVVQFLEKDTTLTEPVIRGLLKFW 318

Query: 1209 PKTCSQKEVMFLGEIEEILDVIEPTQFKKIEEPLFKQISKCVSSSHFQVAERALYFWNNE 1388
            PKTCSQKEVMFLGEIEEILDVIEPTQFKKIEEPLFKQISKCVSSSHFQVAERALYFWNNE
Sbjct: 319  PKTCSQKEVMFLGEIEEILDVIEPTQFKKIEEPLFKQISKCVSSSHFQVAERALYFWNNE 378

Query: 1389 YILSLIEENIDKILPIMFGSLYKISKEHWNPTIVALVYNVLKTLMEMNGKLFDDLTSSYX 1568
            YILSLIEENIDKILPIMF SLYKISKEHWNPTIVALVYNVLKTLMEMNGKLFDDLTSSY 
Sbjct: 379  YILSLIEENIDKILPIMFASLYKISKEHWNPTIVALVYNVLKTLMEMNGKLFDDLTSSYK 438

Query: 1569 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSAYNMHSILSNTSDE 1712
                                            NSAYNMHSILSNTS E
Sbjct: 439  AERQREKKKELEREELWKKLEELKLKKALEKQNSAYNMHSILSNTSAE 486


>ref|NP_001186685.1| serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit
            alpha isoform isoform 2 [Homo sapiens].
          Length = 429

 Score =  720 bits (1859), Expect = 0.0
 Identities = 372/428 (86%), Positives = 374/428 (87%)
 Frame = +3

Query: 429  LKDATSNEQQELFCQKLQQCCILFDFMDSVSDLKSKEIKRATLNELVEYVSTNRGVIVES 608
            + +ATSNEQQELFCQKLQQCCILFDFMDSVSDLKSKEIKRATLNELVEYVSTNRGVIVES
Sbjct: 2    IMNATSNEQQELFCQKLQQCCILFDFMDSVSDLKSKEIKRATLNELVEYVSTNRGVIVES 61

Query: 609  AYSDIVKMISANIFRTLXXXXXXXXXXXXXXXXXXASWPHIQLVYEFFLRFLESPDFQPS 788
            AYSDIVKMISANIFRTL                  ASWPHIQLVYEFFLRFLESPDFQPS
Sbjct: 62   AYSDIVKMISANIFRTLPPSDNPDFDPEEDEPTLEASWPHIQLVYEFFLRFLESPDFQPS 121

Query: 789  IAKRYIDQKFVQQLLELFDSEDPRERDFLKTVLHRIYGKFLGLRAFIRKQINNIFLRFIY 968
            IAKRYIDQKFVQQLLELFDSEDPRERDFLKTVLHRIYGKFLGLRAFIRKQINNIFLRFIY
Sbjct: 122  IAKRYIDQKFVQQLLELFDSEDPRERDFLKTVLHRIYGKFLGLRAFIRKQINNIFLRFIY 181

Query: 969  ETEHFNGVAELLEILGSIINGFALPLKAEHKQFLMKVLIPMHTAKGLALFHAQLAYCVVQ 1148
            ETEHFNGVAELLEILGSIINGFALPLKAEHKQFLMKVLIPMHTAKGLALFHAQLAYCVVQ
Sbjct: 182  ETEHFNGVAELLEILGSIINGFALPLKAEHKQFLMKVLIPMHTAKGLALFHAQLAYCVVQ 241

Query: 1149 FLEKDTTLTEPVIRGLLKFWPKTCSQKEVMFLGEIEEILDVIEPTQFKKIEEPLFKQISK 1328
            FLEKDTTLTEPVIRGLLKFWPKTCSQKEVMFLGEIEEILDVIEPTQFKKIEEPLFKQISK
Sbjct: 242  FLEKDTTLTEPVIRGLLKFWPKTCSQKEVMFLGEIEEILDVIEPTQFKKIEEPLFKQISK 301

Query: 1329 CVSSSHFQVAERALYFWNNEYILSLIEENIDKILPIMFGSLYKISKEHWNPTIVALVYNV 1508
            CVSSSHFQVAERALYFWNNEYILSLIEENIDKILPIMF SLYKISKEHWNPTIVALVYNV
Sbjct: 302  CVSSSHFQVAERALYFWNNEYILSLIEENIDKILPIMFASLYKISKEHWNPTIVALVYNV 361

Query: 1509 LKTLMEMNGKLFDDLTSSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSAYNMHS 1688
            LKTLMEMNGKLFDDLTSSY                                 NSAYNMHS
Sbjct: 362  LKTLMEMNGKLFDDLTSSYKAERQREKKKELEREELWKKLEELKLKKALEKQNSAYNMHS 421

Query: 1689 ILSNTSDE 1712
            ILSNTS E
Sbjct: 422  ILSNTSAE 429


>ref|NP_006237.1| serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit
            epsilon isoform [Homo sapiens].
          Length = 467

 Score =  622 bits (1603), Expect = e-178
 Identities = 306/419 (73%), Positives = 349/419 (83%)
 Frame = +3

Query: 309  EKVDGFTRKSVXXXXXXXXXXXXXXXXXXXXXPELHPLPQLKDATSNEQQELFCQKLQQC 488
            +KVDGF+RKSV                      EL PLP LKD  S+EQ ELF +KLQQC
Sbjct: 12   DKVDGFSRKSVRKARQKRSQSSSQFRSQGKPI-ELTPLPLLKDVPSSEQPELFLKKLQQC 70

Query: 489  CILFDFMDSVSDLKSKEIKRATLNELVEYVSTNRGVIVESAYSDIVKMISANIFRTLXXX 668
            C++FDFMD++SDLK KE KR+TLNELV+Y++ +RG + E  Y ++V+M+S NIFRTL   
Sbjct: 71   CVIFDFMDTLSDLKMKEYKRSTLNELVDYITISRGCLTEQTYPEVVRMVSCNIFRTLPPS 130

Query: 669  XXXXXXXXXXXXXXXASWPHIQLVYEFFLRFLESPDFQPSIAKRYIDQKFVQQLLELFDS 848
                           ASWPH+QLVYEFF+RFLES +FQPSIAK+YIDQKFV QLLELFDS
Sbjct: 131  DSNEFDPEEDEPTLEASWPHLQLVYEFFIRFLESQEFQPSIAKKYIDQKFVLQLLELFDS 190

Query: 849  EDPRERDFLKTVLHRIYGKFLGLRAFIRKQINNIFLRFIYETEHFNGVAELLEILGSIIN 1028
            EDPRERD+LKTVLHRIYGKFLGLRAFIRKQINNIFLRF+YETEHFNGVAELLEILGSIIN
Sbjct: 191  EDPRERDYLKTVLHRIYGKFLGLRAFIRKQINNIFLRFVYETEHFNGVAELLEILGSIIN 250

Query: 1029 GFALPLKAEHKQFLMKVLIPMHTAKGLALFHAQLAYCVVQFLEKDTTLTEPVIRGLLKFW 1208
            GFALPLKAEHKQFL+KVLIP+HT + L+LFHAQLAYC+VQFLEKD +LTEPVIRGL+KFW
Sbjct: 251  GFALPLKAEHKQFLVKVLIPLHTVRSLSLFHAQLAYCIVQFLEKDPSLTEPVIRGLMKFW 310

Query: 1209 PKTCSQKEVMFLGEIEEILDVIEPTQFKKIEEPLFKQISKCVSSSHFQVAERALYFWNNE 1388
            PKTCSQKEVMFLGE+EEILDVIEP+QF KI+EPLFKQI+KCVSS HFQVAERALY+WNNE
Sbjct: 311  PKTCSQKEVMFLGELEEILDVIEPSQFVKIQEPLFKQIAKCVSSPHFQVAERALYYWNNE 370

Query: 1389 YILSLIEENIDKILPIMFGSLYKISKEHWNPTIVALVYNVLKTLMEMNGKLFDDLTSSY 1565
            YI+SLIEEN + ILPIMF SLY+ISKEHWNP IVALVYNVLK  MEMN  +FD+LT++Y
Sbjct: 371  YIMSLIEENSNVILPIMFSSLYRISKEHWNPAIVALVYNVLKAFMEMNSTMFDELTATY 429


>ref|NP_006235.1| serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit
            beta isoform [Homo sapiens].
          Length = 497

 Score =  595 bits (1534), Expect = e-170
 Identities = 291/419 (69%), Positives = 341/419 (81%)
 Frame = +3

Query: 309  EKVDGFTRKSVXXXXXXXXXXXXXXXXXXXXXPELHPLPQLKDATSNEQQELFCQKLQQC 488
            +KVDGF+R+S+                      EL PLP LKD  ++E  EL  +KL QC
Sbjct: 26   DKVDGFSRRSLRRARPRRSHSSSQFRYQSNQQ-ELTPLPLLKDVPASELHELLSRKLAQC 84

Query: 489  CILFDFMDSVSDLKSKEIKRATLNELVEYVSTNRGVIVESAYSDIVKMISANIFRTLXXX 668
             ++FDF+D V+DLK KE+KRA LNELVE V + RGV++E  Y DI++MIS NIFRTL   
Sbjct: 85   GVMFDFLDCVADLKGKEVKRAALNELVECVGSTRGVLIEPVYPDIIRMISVNIFRTLPPS 144

Query: 669  XXXXXXXXXXXXXXXASWPHIQLVYEFFLRFLESPDFQPSIAKRYIDQKFVQQLLELFDS 848
                            SWPH+QLVYEFFLRFLESPDFQPS+AKRY+DQKFV  LLELFDS
Sbjct: 145  ENPEFDPEEDEPNLEPSWPHLQLVYEFFLRFLESPDFQPSVAKRYVDQKFVLMLLELFDS 204

Query: 849  EDPRERDFLKTVLHRIYGKFLGLRAFIRKQINNIFLRFIYETEHFNGVAELLEILGSIIN 1028
            EDPRER++LKT+LHR+YGKFLGLRA+IRKQ N+IFLRFIYE EHFNGVAELLEILGSIIN
Sbjct: 205  EDPREREYLKTILHRVYGKFLGLRAYIRKQCNHIFLRFIYEFEHFNGVAELLEILGSIIN 264

Query: 1029 GFALPLKAEHKQFLMKVLIPMHTAKGLALFHAQLAYCVVQFLEKDTTLTEPVIRGLLKFW 1208
            GFALPLK EHKQFL++VLIP+H+ K L++FHAQLAYCVVQFLEKD TLTE VIRGLLK+W
Sbjct: 265  GFALPLKTEHKQFLVRVLIPLHSVKSLSVFHAQLAYCVVQFLEKDATLTEHVIRGLLKYW 324

Query: 1209 PKTCSQKEVMFLGEIEEILDVIEPTQFKKIEEPLFKQISKCVSSSHFQVAERALYFWNNE 1388
            PKTC+QKEVMFLGE+EEILDVIEP+QF KI+EPLFKQ+++CVSS HFQVAERALYFWNNE
Sbjct: 325  PKTCTQKEVMFLGEMEEILDVIEPSQFVKIQEPLFKQVARCVSSPHFQVAERALYFWNNE 384

Query: 1389 YILSLIEENIDKILPIMFGSLYKISKEHWNPTIVALVYNVLKTLMEMNGKLFDDLTSSY 1565
            YILSLIE+N   +LP +FG+LY++SKEHWN TIV+L+YNVLKT MEMNGKLFD+LT+SY
Sbjct: 385  YILSLIEDNCHTVLPAVFGTLYQVSKEHWNQTIVSLIYNVLKTFMEMNGKLFDELTASY 443


>ref|NP_001155198.1| serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit
            gamma isoform isoform f [Homo sapiens].
          Length = 540

 Score =  548 bits (1411), Expect = e-155
 Identities = 271/390 (69%), Positives = 314/390 (80%), Gaps = 4/390 (1%)
 Frame = +3

Query: 408  ELHPLPQLKDATSNEQQELFCQKLQQCCILFDFM-DSVSDLKSKEIKRATLNELVEYVST 584
            EL  LP LKD    +Q++LF QKL+QCC+LFDF+ D +SDLK KE+KRA L+E+VEY++ 
Sbjct: 78   ELQKLPSLKDVPPADQEKLFIQKLRQCCVLFDFVSDPLSDLKWKEVKRAALSEMVEYITH 137

Query: 585  NRGVIVESAYSDIVKMISANIFRTLXXXXXXXXXXXXXXXXXX---ASWPHIQLVYEFFL 755
            NR VI E  Y ++V M + N+FRTL                     A+WPH+QLVYEFFL
Sbjct: 138  NRNVITEPIYPEVVHMFAVNMFRTLPPSSNPTGAEFDPEEDEPTLEAAWPHLQLVYEFFL 197

Query: 756  RFLESPDFQPSIAKRYIDQKFVQQLLELFDSEDPRERDFLKTVLHRIYGKFLGLRAFIRK 935
            RFLESPDFQP+IAK+YIDQKFV QLLELFDSEDPRERDFLKT LHRIYGKFLGLRA+IRK
Sbjct: 198  RFLESPDFQPNIAKKYIDQKFVLQLLELFDSEDPRERDFLKTTLHRIYGKFLGLRAYIRK 257

Query: 936  QINNIFLRFIYETEHFNGVAELLEILGSIINGFALPLKAEHKQFLMKVLIPMHTAKGLAL 1115
            QINNIF RFIYETEH NG+AELLEILGSIINGFALPLK EHK FL+KVL+P+H  K L++
Sbjct: 258  QINNIFYRFIYETEHHNGIAELLEILGSIINGFALPLKEEHKIFLLKVLLPLHKVKSLSV 317

Query: 1116 FHAQLAYCVVQFLEKDTTLTEPVIRGLLKFWPKTCSQKEVMFLGEIEEILDVIEPTQFKK 1295
            +H QLAYCVVQFLEKD+TLTEPV+  LLK+WPKT S KEVMFL E+EEILDVIEP++F K
Sbjct: 318  YHPQLAYCVVQFLEKDSTLTEPVVMALLKYWPKTHSPKEVMFLNELEEILDVIEPSEFVK 377

Query: 1296 IEEPLFKQISKCVSSSHFQVAERALYFWNNEYILSLIEENIDKILPIMFGSLYKISKEHW 1475
            I EPLF+Q++KCVSS HFQVAERALY+WNNEYI+SLI +N  KILPIMF SLY+ SK HW
Sbjct: 378  IMEPLFRQLAKCVSSPHFQVAERALYYWNNEYIMSLISDNAAKILPIMFPSLYRNSKTHW 437

Query: 1476 NPTIVALVYNVLKTLMEMNGKLFDDLTSSY 1565
            N TI  L+YN LK  MEMN KLFDD T  +
Sbjct: 438  NKTIHGLIYNALKLFMEMNQKLFDDCTQQF 467


>ref|NP_006236.1| serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit
            delta isoform isoform 1 [Homo sapiens].
          Length = 602

 Score =  544 bits (1401), Expect = e-154
 Identities = 265/390 (67%), Positives = 317/390 (81%), Gaps = 4/390 (1%)
 Frame = +3

Query: 408  ELHPLPQLKDATSNEQQELFCQKLQQCCILFDFM-DSVSDLKSKEIKRATLNELVEYVST 584
            EL  LP LKD+ + E++ELF QKL+QCC+LFDF+ D +SDLK KE+KRA LNE+VEY++ 
Sbjct: 99   ELQKLPALKDSPTQEREELFIQKLRQCCVLFDFVSDPLSDLKFKEVKRAGLNEMVEYITH 158

Query: 585  NRGVIVESAYSDIVKMISANIFRTLXXXXXXXXXXXXXXXXXX---ASWPHIQLVYEFFL 755
            +R V+ E+ Y + V M S N+FRTL                     A+WPH+QLVYEFFL
Sbjct: 159  SRDVVTEAIYPEAVTMFSVNLFRTLPPSSNPTGAEFDPEEDEPTLEAAWPHLQLVYEFFL 218

Query: 756  RFLESPDFQPSIAKRYIDQKFVQQLLELFDSEDPRERDFLKTVLHRIYGKFLGLRAFIRK 935
            RFLESPDFQP+IAK+YIDQKFV  LL+LFDSEDPRERDFLKT+LHRIYGKFLGLRA+IR+
Sbjct: 219  RFLESPDFQPNIAKKYIDQKFVLALLDLFDSEDPRERDFLKTILHRIYGKFLGLRAYIRR 278

Query: 936  QINNIFLRFIYETEHFNGVAELLEILGSIINGFALPLKAEHKQFLMKVLIPMHTAKGLAL 1115
            QIN+IF RFIYETEH NG+AELLEILGSIINGFALPLK EHK FL++VL+P+H  K L++
Sbjct: 279  QINHIFYRFIYETEHHNGIAELLEILGSIINGFALPLKEEHKMFLIRVLLPLHKVKSLSV 338

Query: 1116 FHAQLAYCVVQFLEKDTTLTEPVIRGLLKFWPKTCSQKEVMFLGEIEEILDVIEPTQFKK 1295
            +H QLAYCVVQFLEK+++LTEPVI GLLKFWPKT S KEVMFL E+EEILDVIEP++F K
Sbjct: 339  YHPQLAYCVVQFLEKESSLTEPVIVGLLKFWPKTHSPKEVMFLNELEEILDVIEPSEFSK 398

Query: 1296 IEEPLFKQISKCVSSSHFQVAERALYFWNNEYILSLIEENIDKILPIMFGSLYKISKEHW 1475
            + EPLF+Q++KCVSS HFQVAERALY+WNNEYI+SLI +N  ++LPIMF +LY+ SK HW
Sbjct: 399  VMEPLFRQLAKCVSSPHFQVAERALYYWNNEYIMSLISDNAARVLPIMFPALYRNSKSHW 458

Query: 1476 NPTIVALVYNVLKTLMEMNGKLFDDLTSSY 1565
            N TI  L+YN LK  MEMN KLFDD T  Y
Sbjct: 459  NKTIHGLIYNALKLFMEMNQKLFDDCTQQY 488


>ref|NP_848702.1| serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit
            gamma isoform isoform c [Homo sapiens].
          Length = 449

 Score =  539 bits (1388), Expect = e-153
 Identities = 266/386 (68%), Positives = 311/386 (80%), Gaps = 4/386 (1%)
 Frame = +3

Query: 420  LPQLKDATSNEQQELFCQKLQQCCILFDFM-DSVSDLKSKEIKRATLNELVEYVSTNRGV 596
            L  ++D    +Q++LF QKL+QCC+LFDF+ D +SDLK KE+KRA L+E+VEY++ NR V
Sbjct: 27   LLHIRDVPPADQEKLFIQKLRQCCVLFDFVSDPLSDLKWKEVKRAALSEMVEYITHNRNV 86

Query: 597  IVESAYSDIVKMISANIFRTLXXXXXXXXXXXXXXXXXX---ASWPHIQLVYEFFLRFLE 767
            I E  Y ++V M + N+FRTL                     A+WPH+QLVYEFFLRFLE
Sbjct: 87   ITEPIYPEVVHMFAVNMFRTLPPSSNPTGAEFDPEEDEPTLEAAWPHLQLVYEFFLRFLE 146

Query: 768  SPDFQPSIAKRYIDQKFVQQLLELFDSEDPRERDFLKTVLHRIYGKFLGLRAFIRKQINN 947
            SPDFQP+IAK+YIDQKFV QLLELFDSEDPRERDFLKT LHRIYGKFLGLRA+IRKQINN
Sbjct: 147  SPDFQPNIAKKYIDQKFVLQLLELFDSEDPRERDFLKTTLHRIYGKFLGLRAYIRKQINN 206

Query: 948  IFLRFIYETEHFNGVAELLEILGSIINGFALPLKAEHKQFLMKVLIPMHTAKGLALFHAQ 1127
            IF RFIYETEH NG+AELLEILGSIINGFALPLK EHK FL+KVL+P+H  K L+++H Q
Sbjct: 207  IFYRFIYETEHHNGIAELLEILGSIINGFALPLKEEHKIFLLKVLLPLHKVKSLSVYHPQ 266

Query: 1128 LAYCVVQFLEKDTTLTEPVIRGLLKFWPKTCSQKEVMFLGEIEEILDVIEPTQFKKIEEP 1307
            LAYCVVQFLEKD+TLTEPV+  LLK+WPKT S KEVMFL E+EEILDVIEP++F KI EP
Sbjct: 267  LAYCVVQFLEKDSTLTEPVVMALLKYWPKTHSPKEVMFLNELEEILDVIEPSEFVKIMEP 326

Query: 1308 LFKQISKCVSSSHFQVAERALYFWNNEYILSLIEENIDKILPIMFGSLYKISKEHWNPTI 1487
            LF+Q++KCVSS HFQVAERALY+WNNEYI+SLI +N  KILPIMF SLY+ SK HWN TI
Sbjct: 327  LFRQLAKCVSSPHFQVAERALYYWNNEYIMSLISDNAAKILPIMFPSLYRNSKTHWNKTI 386

Query: 1488 VALVYNVLKTLMEMNGKLFDDLTSSY 1565
              L+YN LK  MEMN KLFDD T  +
Sbjct: 387  HGLIYNALKLFMEMNQKLFDDCTQQF 412


>ref|NP_848701.1| serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit
            gamma isoform isoform b [Homo sapiens].
          Length = 485

 Score =  539 bits (1388), Expect = e-153
 Identities = 266/386 (68%), Positives = 311/386 (80%), Gaps = 4/386 (1%)
 Frame = +3

Query: 420  LPQLKDATSNEQQELFCQKLQQCCILFDFM-DSVSDLKSKEIKRATLNELVEYVSTNRGV 596
            L  ++D    +Q++LF QKL+QCC+LFDF+ D +SDLK KE+KRA L+E+VEY++ NR V
Sbjct: 27   LLHIRDVPPADQEKLFIQKLRQCCVLFDFVSDPLSDLKWKEVKRAALSEMVEYITHNRNV 86

Query: 597  IVESAYSDIVKMISANIFRTLXXXXXXXXXXXXXXXXXX---ASWPHIQLVYEFFLRFLE 767
            I E  Y ++V M + N+FRTL                     A+WPH+QLVYEFFLRFLE
Sbjct: 87   ITEPIYPEVVHMFAVNMFRTLPPSSNPTGAEFDPEEDEPTLEAAWPHLQLVYEFFLRFLE 146

Query: 768  SPDFQPSIAKRYIDQKFVQQLLELFDSEDPRERDFLKTVLHRIYGKFLGLRAFIRKQINN 947
            SPDFQP+IAK+YIDQKFV QLLELFDSEDPRERDFLKT LHRIYGKFLGLRA+IRKQINN
Sbjct: 147  SPDFQPNIAKKYIDQKFVLQLLELFDSEDPRERDFLKTTLHRIYGKFLGLRAYIRKQINN 206

Query: 948  IFLRFIYETEHFNGVAELLEILGSIINGFALPLKAEHKQFLMKVLIPMHTAKGLALFHAQ 1127
            IF RFIYETEH NG+AELLEILGSIINGFALPLK EHK FL+KVL+P+H  K L+++H Q
Sbjct: 207  IFYRFIYETEHHNGIAELLEILGSIINGFALPLKEEHKIFLLKVLLPLHKVKSLSVYHPQ 266

Query: 1128 LAYCVVQFLEKDTTLTEPVIRGLLKFWPKTCSQKEVMFLGEIEEILDVIEPTQFKKIEEP 1307
            LAYCVVQFLEKD+TLTEPV+  LLK+WPKT S KEVMFL E+EEILDVIEP++F KI EP
Sbjct: 267  LAYCVVQFLEKDSTLTEPVVMALLKYWPKTHSPKEVMFLNELEEILDVIEPSEFVKIMEP 326

Query: 1308 LFKQISKCVSSSHFQVAERALYFWNNEYILSLIEENIDKILPIMFGSLYKISKEHWNPTI 1487
            LF+Q++KCVSS HFQVAERALY+WNNEYI+SLI +N  KILPIMF SLY+ SK HWN TI
Sbjct: 327  LFRQLAKCVSSPHFQVAERALYYWNNEYIMSLISDNAAKILPIMFPSLYRNSKTHWNKTI 386

Query: 1488 VALVYNVLKTLMEMNGKLFDDLTSSY 1565
              L+YN LK  MEMN KLFDD T  +
Sbjct: 387  HGLIYNALKLFMEMNQKLFDDCTQQF 412


>ref|NP_002710.2| serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit
            gamma isoform isoform a [Homo sapiens].
          Length = 524

 Score =  539 bits (1388), Expect = e-153
 Identities = 266/386 (68%), Positives = 311/386 (80%), Gaps = 4/386 (1%)
 Frame = +3

Query: 420  LPQLKDATSNEQQELFCQKLQQCCILFDFM-DSVSDLKSKEIKRATLNELVEYVSTNRGV 596
            L  ++D    +Q++LF QKL+QCC+LFDF+ D +SDLK KE+KRA L+E+VEY++ NR V
Sbjct: 27   LLHIRDVPPADQEKLFIQKLRQCCVLFDFVSDPLSDLKWKEVKRAALSEMVEYITHNRNV 86

Query: 597  IVESAYSDIVKMISANIFRTLXXXXXXXXXXXXXXXXXX---ASWPHIQLVYEFFLRFLE 767
            I E  Y ++V M + N+FRTL                     A+WPH+QLVYEFFLRFLE
Sbjct: 87   ITEPIYPEVVHMFAVNMFRTLPPSSNPTGAEFDPEEDEPTLEAAWPHLQLVYEFFLRFLE 146

Query: 768  SPDFQPSIAKRYIDQKFVQQLLELFDSEDPRERDFLKTVLHRIYGKFLGLRAFIRKQINN 947
            SPDFQP+IAK+YIDQKFV QLLELFDSEDPRERDFLKT LHRIYGKFLGLRA+IRKQINN
Sbjct: 147  SPDFQPNIAKKYIDQKFVLQLLELFDSEDPRERDFLKTTLHRIYGKFLGLRAYIRKQINN 206

Query: 948  IFLRFIYETEHFNGVAELLEILGSIINGFALPLKAEHKQFLMKVLIPMHTAKGLALFHAQ 1127
            IF RFIYETEH NG+AELLEILGSIINGFALPLK EHK FL+KVL+P+H  K L+++H Q
Sbjct: 207  IFYRFIYETEHHNGIAELLEILGSIINGFALPLKEEHKIFLLKVLLPLHKVKSLSVYHPQ 266

Query: 1128 LAYCVVQFLEKDTTLTEPVIRGLLKFWPKTCSQKEVMFLGEIEEILDVIEPTQFKKIEEP 1307
            LAYCVVQFLEKD+TLTEPV+  LLK+WPKT S KEVMFL E+EEILDVIEP++F KI EP
Sbjct: 267  LAYCVVQFLEKDSTLTEPVVMALLKYWPKTHSPKEVMFLNELEEILDVIEPSEFVKIMEP 326

Query: 1308 LFKQISKCVSSSHFQVAERALYFWNNEYILSLIEENIDKILPIMFGSLYKISKEHWNPTI 1487
            LF+Q++KCVSS HFQVAERALY+WNNEYI+SLI +N  KILPIMF SLY+ SK HWN TI
Sbjct: 327  LFRQLAKCVSSPHFQVAERALYYWNNEYIMSLISDNAAKILPIMFPSLYRNSKTHWNKTI 386

Query: 1488 VALVYNVLKTLMEMNGKLFDDLTSSY 1565
              L+YN LK  MEMN KLFDD T  +
Sbjct: 387  HGLIYNALKLFMEMNQKLFDDCTQQF 412


>ref|NP_001155197.1| serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit
            gamma isoform isoform e [Homo sapiens].
          Length = 555

 Score =  538 bits (1386), Expect = e-153
 Identities = 266/384 (69%), Positives = 310/384 (80%), Gaps = 4/384 (1%)
 Frame = +3

Query: 426  QLKDATSNEQQELFCQKLQQCCILFDFM-DSVSDLKSKEIKRATLNELVEYVSTNRGVIV 602
            Q +D    +Q++LF QKL+QCC+LFDF+ D +SDLK KE+KRA L+E+VEY++ NR VI 
Sbjct: 60   QGRDVPPADQEKLFIQKLRQCCVLFDFVSDPLSDLKWKEVKRAALSEMVEYITHNRNVIT 119

Query: 603  ESAYSDIVKMISANIFRTLXXXXXXXXXXXXXXXXXX---ASWPHIQLVYEFFLRFLESP 773
            E  Y ++V M + N+FRTL                     A+WPH+QLVYEFFLRFLESP
Sbjct: 120  EPIYPEVVHMFAVNMFRTLPPSSNPTGAEFDPEEDEPTLEAAWPHLQLVYEFFLRFLESP 179

Query: 774  DFQPSIAKRYIDQKFVQQLLELFDSEDPRERDFLKTVLHRIYGKFLGLRAFIRKQINNIF 953
            DFQP+IAK+YIDQKFV QLLELFDSEDPRERDFLKT LHRIYGKFLGLRA+IRKQINNIF
Sbjct: 180  DFQPNIAKKYIDQKFVLQLLELFDSEDPRERDFLKTTLHRIYGKFLGLRAYIRKQINNIF 239

Query: 954  LRFIYETEHFNGVAELLEILGSIINGFALPLKAEHKQFLMKVLIPMHTAKGLALFHAQLA 1133
             RFIYETEH NG+AELLEILGSIINGFALPLK EHK FL+KVL+P+H  K L+++H QLA
Sbjct: 240  YRFIYETEHHNGIAELLEILGSIINGFALPLKEEHKIFLLKVLLPLHKVKSLSVYHPQLA 299

Query: 1134 YCVVQFLEKDTTLTEPVIRGLLKFWPKTCSQKEVMFLGEIEEILDVIEPTQFKKIEEPLF 1313
            YCVVQFLEKD+TLTEPV+  LLK+WPKT S KEVMFL E+EEILDVIEP++F KI EPLF
Sbjct: 300  YCVVQFLEKDSTLTEPVVMALLKYWPKTHSPKEVMFLNELEEILDVIEPSEFVKIMEPLF 359

Query: 1314 KQISKCVSSSHFQVAERALYFWNNEYILSLIEENIDKILPIMFGSLYKISKEHWNPTIVA 1493
            +Q++KCVSS HFQVAERALY+WNNEYI+SLI +N  KILPIMF SLY+ SK HWN TI  
Sbjct: 360  RQLAKCVSSPHFQVAERALYYWNNEYIMSLISDNAAKILPIMFPSLYRNSKTHWNKTIHG 419

Query: 1494 LVYNVLKTLMEMNGKLFDDLTSSY 1565
            L+YN LK  MEMN KLFDD T  +
Sbjct: 420  LIYNALKLFMEMNQKLFDDCTQQF 443


  Database: RefSeq49_HP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,297,164
  Number of sequences in database:  32,964
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 69,119,125
Number of extensions: 1507410
Number of successful extensions: 4088
Number of sequences better than 1.0e-05: 12
Number of HSP's gapped: 4063
Number of HSP's successfully gapped: 12
Length of query: 797
Length of database: 18,297,164
Length adjustment: 111
Effective length of query: 686
Effective length of database: 14,638,160
Effective search space: 10041777760
Effective search space used: 10041777760
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

Search to RefSeqMP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-002863
         (2392 letters)

Database: RefSeq49_MP.fasta 
           30,036 sequences; 15,617,559 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_659129.2| serine/threonine-protein phosphatase 2A 56 kDa ...   743   0.0  
Alignment   gi|NP_036154.1| serine/threonine-protein phosphatase 2A 56 kDa ...   620   e-177
Alignment   gi|NP_937811.1| serine/threonine-protein phosphatase 2A 56 kDa ...   595   e-170
Alignment   gi|NP_001128473.1| serine/threonine-protein phosphatase 2A 56 k...   546   e-155
Alignment   gi|NP_033384.2| delta isoform of regulatory subunit B56, protei...   544   e-154
Alignment   gi|NP_001074927.1| serine/threonine-protein phosphatase 2A 56 k...   537   e-152
Alignment   gi|NP_001074926.1| serine/threonine-protein phosphatase 2A 56 k...   537   e-152
Alignment   gi|NP_036153.2| serine/threonine-protein phosphatase 2A 56 kDa ...   537   e-152

>ref|NP_659129.2| serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit
            alpha isoform [Mus musculus].
          Length = 486

 Score =  743 bits (1919), Expect = 0.0
 Identities = 387/466 (83%), Positives = 390/466 (83%)
 Frame = +3

Query: 309  EKVDGFTRKSVXXXXXXXXXXXXXXXXXXXXXPELHPLPQLKDATSNEQQELFCQKLQQC 488
            EKVDGFTRKSV                      ELHPLPQLKDATSNEQQELFCQKLQQC
Sbjct: 19   EKVDGFTRKSVRKAQRQKRSQGSSQFRSQGSQAELHPLPQLKDATSNEQQELFCQKLQQC 78

Query: 489  CILFDFMDSVSDLKSKEIKRATLNELVEYVSTNRGVIVESAYSDIVKMISANIFRTLXXX 668
            C+LFDFMDSVSDLKSKEIKRATLNELVEYVSTNRGVIVESAYSDIVKMISANIFRTL   
Sbjct: 79   CVLFDFMDSVSDLKSKEIKRATLNELVEYVSTNRGVIVESAYSDIVKMISANIFRTLPPS 138

Query: 669  XXXXXXXXXXXXXXXASWPHIQLVYEFFLRFLESPDFQPSIAKRYIDQKFVQQLLELFDS 848
                           ASWPHIQLVYEFFLRFLESPDFQPSIAKRYIDQKFVQQLLELFDS
Sbjct: 139  DNPDFDPEEDEPTLEASWPHIQLVYEFFLRFLESPDFQPSIAKRYIDQKFVQQLLELFDS 198

Query: 849  EDPRERDFLKTVLHRIYGKFLGLRAFIRKQINNIFLRFIYETEHFNGVAELLEILGSIIN 1028
            EDPRERDFLKTVLHRIYGKFLGLRAFIRKQINNIFLRFIYETEHFNGVAELLEILGSIIN
Sbjct: 199  EDPRERDFLKTVLHRIYGKFLGLRAFIRKQINNIFLRFIYETEHFNGVAELLEILGSIIN 258

Query: 1029 GFALPLKAEHKQFLMKVLIPMHTAKGLALFHAQLAYCVVQFLEKDTTLTEPVIRGLLKFW 1208
            GFALPLKAEHKQFLMKVLIPMHTAKGLALFHAQLAYCVVQFLEKDTTLTEPVIRGLLKFW
Sbjct: 259  GFALPLKAEHKQFLMKVLIPMHTAKGLALFHAQLAYCVVQFLEKDTTLTEPVIRGLLKFW 318

Query: 1209 PKTCSQKEVMFLGEIEEILDVIEPTQFKKIEEPLFKQISKCVSSSHFQVAERALYFWNNE 1388
            PKTCSQKEVMFLGEIEEILDVIEPTQFKKIEEPLFKQISKCVSSSHFQVAERALYFWNNE
Sbjct: 319  PKTCSQKEVMFLGEIEEILDVIEPTQFKKIEEPLFKQISKCVSSSHFQVAERALYFWNNE 378

Query: 1389 YILSLIEENIDKILPIMFGSLYKISKEHWNPTIVALVYNVLKTLMEMNGKLFDDLTSSYX 1568
            YILSLIEENIDKILPIMF SLYKISKEHWN TIVALVYNVLKTLMEMNGKLFDDLTSSY 
Sbjct: 379  YILSLIEENIDKILPIMFASLYKISKEHWNQTIVALVYNVLKTLMEMNGKLFDDLTSSYK 438

Query: 1569 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSAYNMHSILSNTS 1706
                                            N+AYNMHSI S+TS
Sbjct: 439  AERQREKKKELEREELWKKLEELQLKKALEKQNNAYNMHSIRSSTS 484


>ref|NP_036154.1| serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit
            epsilon isoform [Mus musculus].
          Length = 467

 Score =  620 bits (1600), Expect = e-177
 Identities = 305/419 (72%), Positives = 349/419 (83%)
 Frame = +3

Query: 309  EKVDGFTRKSVXXXXXXXXXXXXXXXXXXXXXPELHPLPQLKDATSNEQQELFCQKLQQC 488
            +KVDGF+RKSV                      EL PLP LKD  ++EQ ELF +KLQQC
Sbjct: 12   DKVDGFSRKSVRKARQKRSQSSSQFRSQGKPI-ELTPLPLLKDVPTSEQPELFLKKLQQC 70

Query: 489  CILFDFMDSVSDLKSKEIKRATLNELVEYVSTNRGVIVESAYSDIVKMISANIFRTLXXX 668
            C++FDFMD++SDLK KE KR+TLNELV+Y++ +RG + E  Y ++V+M+S NIFRTL   
Sbjct: 71   CVIFDFMDTLSDLKMKEYKRSTLNELVDYITISRGCLTEQTYPEVVRMVSCNIFRTLPPS 130

Query: 669  XXXXXXXXXXXXXXXASWPHIQLVYEFFLRFLESPDFQPSIAKRYIDQKFVQQLLELFDS 848
                           ASWPH+QLVYEFF+RFLES +FQPSIAK+YIDQKFV QLLELFDS
Sbjct: 131  DSNEFDPEEDEPTLEASWPHLQLVYEFFIRFLESQEFQPSIAKKYIDQKFVLQLLELFDS 190

Query: 849  EDPRERDFLKTVLHRIYGKFLGLRAFIRKQINNIFLRFIYETEHFNGVAELLEILGSIIN 1028
            EDPRERD+LKTVLHRIYGKFLGLRAFIRKQINNIFLRF+YETEHFNGVAELLEILGSIIN
Sbjct: 191  EDPRERDYLKTVLHRIYGKFLGLRAFIRKQINNIFLRFVYETEHFNGVAELLEILGSIIN 250

Query: 1029 GFALPLKAEHKQFLMKVLIPMHTAKGLALFHAQLAYCVVQFLEKDTTLTEPVIRGLLKFW 1208
            GFALPLKAEHKQFL+KVLIP+HT + L+LFHAQLAYC+VQFLEKD +LTEPVIRGL+KFW
Sbjct: 251  GFALPLKAEHKQFLVKVLIPLHTVRSLSLFHAQLAYCIVQFLEKDPSLTEPVIRGLMKFW 310

Query: 1209 PKTCSQKEVMFLGEIEEILDVIEPTQFKKIEEPLFKQISKCVSSSHFQVAERALYFWNNE 1388
            PKTCSQKEVMFLGE+EEILDVIEP+QF KI+EPLFKQI+KCVSS HFQVAERALY+WNNE
Sbjct: 311  PKTCSQKEVMFLGELEEILDVIEPSQFVKIQEPLFKQIAKCVSSPHFQVAERALYYWNNE 370

Query: 1389 YILSLIEENIDKILPIMFGSLYKISKEHWNPTIVALVYNVLKTLMEMNGKLFDDLTSSY 1565
            YI+SLIEEN + ILPIMF SLY+ISKEHWNP IVALVYNVLK  MEMN  +FD+LT++Y
Sbjct: 371  YIMSLIEENSNVILPIMFSSLYRISKEHWNPAIVALVYNVLKAFMEMNSTMFDELTATY 429


>ref|NP_937811.1| serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit
            beta isoform [Mus musculus].
          Length = 497

 Score =  595 bits (1533), Expect = e-170
 Identities = 291/419 (69%), Positives = 340/419 (81%)
 Frame = +3

Query: 309  EKVDGFTRKSVXXXXXXXXXXXXXXXXXXXXXPELHPLPQLKDATSNEQQELFCQKLQQC 488
            +KVDGF+R+S+                      EL PLP LKD  ++E  EL  +KL QC
Sbjct: 26   DKVDGFSRRSLRRARPRRSHSSSQFRYQSNQQ-ELTPLPLLKDVPASELHELLSRKLAQC 84

Query: 489  CILFDFMDSVSDLKSKEIKRATLNELVEYVSTNRGVIVESAYSDIVKMISANIFRTLXXX 668
             ++FDF+D V+DLK KE+KRA LNELVE V   RGV++E  Y DI++MIS NIFRTL   
Sbjct: 85   GVMFDFLDCVADLKGKEVKRAALNELVECVGCTRGVLIEPVYPDIIRMISVNIFRTLPPS 144

Query: 669  XXXXXXXXXXXXXXXASWPHIQLVYEFFLRFLESPDFQPSIAKRYIDQKFVQQLLELFDS 848
                            SWPH+QLVYEFFLRFLESPDFQPS+AKRY+DQKFV  LLELFDS
Sbjct: 145  ENPEFDPEEDEPNLEPSWPHLQLVYEFFLRFLESPDFQPSVAKRYVDQKFVLMLLELFDS 204

Query: 849  EDPRERDFLKTVLHRIYGKFLGLRAFIRKQINNIFLRFIYETEHFNGVAELLEILGSIIN 1028
            EDPRER++LKT+LHR+YGKFLGLRA+IRKQ N+IFLRFIYE EHFNGVAELLEILGSIIN
Sbjct: 205  EDPREREYLKTILHRVYGKFLGLRAYIRKQCNHIFLRFIYELEHFNGVAELLEILGSIIN 264

Query: 1029 GFALPLKAEHKQFLMKVLIPMHTAKGLALFHAQLAYCVVQFLEKDTTLTEPVIRGLLKFW 1208
            GFALPLK EHKQFL++VLIP+H+ K L++FHAQLAYCVVQFLEKD TLTE VIRGLLK+W
Sbjct: 265  GFALPLKTEHKQFLVRVLIPLHSVKSLSVFHAQLAYCVVQFLEKDATLTEHVIRGLLKYW 324

Query: 1209 PKTCSQKEVMFLGEIEEILDVIEPTQFKKIEEPLFKQISKCVSSSHFQVAERALYFWNNE 1388
            PKTC+QKEVMFLGE+EEILDVIEP+QF KI+EPLFKQ+++CVSS HFQVAERALYFWNNE
Sbjct: 325  PKTCTQKEVMFLGEMEEILDVIEPSQFVKIQEPLFKQVARCVSSPHFQVAERALYFWNNE 384

Query: 1389 YILSLIEENIDKILPIMFGSLYKISKEHWNPTIVALVYNVLKTLMEMNGKLFDDLTSSY 1565
            YILSLIE+N   +LP +FG+LY++SKEHWN TIV+L+YNVLKT MEMNGKLFD+LT+SY
Sbjct: 385  YILSLIEDNCHTVLPAVFGTLYQVSKEHWNQTIVSLIYNVLKTFMEMNGKLFDELTASY 443


>ref|NP_001128473.1| serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit
            gamma isoform isoform d [Mus musculus].
          Length = 509

 Score =  546 bits (1407), Expect = e-155
 Identities = 271/390 (69%), Positives = 313/390 (80%), Gaps = 4/390 (1%)
 Frame = +3

Query: 408  ELHPLPQLKDATSNEQQELFCQKLQQCCILFDFM-DSVSDLKSKEIKRATLNELVEYVST 584
            EL  LP LKD    +Q++LF QKL+QCC+LFDF+ D +SDLK KE+KRA L+E+VEY++ 
Sbjct: 80   ELQKLPSLKDVPPADQEKLFIQKLRQCCVLFDFVSDPLSDLKWKEVKRAALSEMVEYITH 139

Query: 585  NRGVIVESAYSDIVKMISANIFRTLXXXXXXXXXXXXXXXXXX---ASWPHIQLVYEFFL 755
            NR VI E  Y + V M + N+FRTL                     A+WPH+QLVYEFFL
Sbjct: 140  NRNVITEPIYPEAVHMFAVNMFRTLPPSSNPTGAEFDPEEDEPTLEAAWPHLQLVYEFFL 199

Query: 756  RFLESPDFQPSIAKRYIDQKFVQQLLELFDSEDPRERDFLKTVLHRIYGKFLGLRAFIRK 935
            RFLESPDFQP+IAK+YIDQKFV QLLELFDSEDPRERDFLKT LHRIYGKFLGLRA+IRK
Sbjct: 200  RFLESPDFQPNIAKKYIDQKFVLQLLELFDSEDPRERDFLKTTLHRIYGKFLGLRAYIRK 259

Query: 936  QINNIFLRFIYETEHFNGVAELLEILGSIINGFALPLKAEHKQFLMKVLIPMHTAKGLAL 1115
            QINNIF RFIYETEH NG+AELLEILGSIINGFALPLK EHK FL+KVL+P+H  K L++
Sbjct: 260  QINNIFYRFIYETEHHNGIAELLEILGSIINGFALPLKEEHKIFLLKVLLPLHKVKSLSV 319

Query: 1116 FHAQLAYCVVQFLEKDTTLTEPVIRGLLKFWPKTCSQKEVMFLGEIEEILDVIEPTQFKK 1295
            +H QLAYCVVQFLEKD+TLTEPV+  LLK+WPKT S KEVMFL E+EEILDVIEP++F K
Sbjct: 320  YHPQLAYCVVQFLEKDSTLTEPVVMALLKYWPKTHSPKEVMFLNELEEILDVIEPSEFVK 379

Query: 1296 IEEPLFKQISKCVSSSHFQVAERALYFWNNEYILSLIEENIDKILPIMFGSLYKISKEHW 1475
            I EPLF+Q++KCVSS HFQVAERALY+WNNEYI+SLI +N  KILPIMF SLY+ SK HW
Sbjct: 380  IMEPLFRQLAKCVSSPHFQVAERALYYWNNEYIMSLISDNAAKILPIMFPSLYRNSKTHW 439

Query: 1476 NPTIVALVYNVLKTLMEMNGKLFDDLTSSY 1565
            N TI  L+YN LK  MEMN KLFDD T  +
Sbjct: 440  NKTIHGLIYNALKLFMEMNQKLFDDCTQQF 469


>ref|NP_033384.2| delta isoform of regulatory subunit B56, protein phosphatase 2A [Mus
            musculus].
          Length = 594

 Score =  544 bits (1401), Expect = e-154
 Identities = 266/390 (68%), Positives = 317/390 (81%), Gaps = 4/390 (1%)
 Frame = +3

Query: 408  ELHPLPQLKDATSNEQQELFCQKLQQCCILFDFM-DSVSDLKSKEIKRATLNELVEYVST 584
            EL  LP LKD+ + E++ELF QKL+QCC+LFDF+ D +SDLK KE+KRA LNE+VEY++ 
Sbjct: 91   ELQKLPALKDSPTQEREELFIQKLRQCCVLFDFVSDPLSDLKCKEVKRAGLNEMVEYITH 150

Query: 585  NRGVIVESAYSDIVKMISANIFRTLXXXXXXXXXXXXXXXXXX---ASWPHIQLVYEFFL 755
            +R V+ E+ Y + V M S N+FRTL                     A+WPH+QLVYEFFL
Sbjct: 151  SRDVVTEAIYPEAVTMFSVNLFRTLPPSSNPTGAEFDPEEDEPTLEAAWPHLQLVYEFFL 210

Query: 756  RFLESPDFQPSIAKRYIDQKFVQQLLELFDSEDPRERDFLKTVLHRIYGKFLGLRAFIRK 935
            RFLESPDFQP+IAK+YIDQKFV  LL+LFDSEDPRERDFLKT+LHRIYGKFLGLRA+IR+
Sbjct: 211  RFLESPDFQPNIAKKYIDQKFVLALLDLFDSEDPRERDFLKTILHRIYGKFLGLRAYIRR 270

Query: 936  QINNIFLRFIYETEHFNGVAELLEILGSIINGFALPLKAEHKQFLMKVLIPMHTAKGLAL 1115
            QIN+IF RFIYETEH NG+AELLEILGSIINGFALPLK EHK FL++VL+P+H  K L++
Sbjct: 271  QINHIFYRFIYETEHHNGIAELLEILGSIINGFALPLKEEHKVFLVRVLLPLHKVKSLSV 330

Query: 1116 FHAQLAYCVVQFLEKDTTLTEPVIRGLLKFWPKTCSQKEVMFLGEIEEILDVIEPTQFKK 1295
            +H QLAYCVVQFLEK+++LTEPVI GLLKFWPKT S KEVMFL E+EEILDVIEP++F K
Sbjct: 331  YHPQLAYCVVQFLEKESSLTEPVIVGLLKFWPKTHSPKEVMFLNELEEILDVIEPSEFSK 390

Query: 1296 IEEPLFKQISKCVSSSHFQVAERALYFWNNEYILSLIEENIDKILPIMFGSLYKISKEHW 1475
            + EPLF+Q++KCVSS HFQVAERALY+WNNEYI+SLI +N  +ILPIMF +LY+ SK HW
Sbjct: 391  VMEPLFRQLAKCVSSPHFQVAERALYYWNNEYIMSLISDNAARILPIMFPALYRNSKSHW 450

Query: 1476 NPTIVALVYNVLKTLMEMNGKLFDDLTSSY 1565
            N TI  L+YN LK  MEMN KLFDD T  Y
Sbjct: 451  NKTIHGLIYNALKLFMEMNQKLFDDCTQQY 480


>ref|NP_001074927.1| serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit
            gamma isoform isoform c [Mus musculus].
          Length = 452

 Score =  537 bits (1384), Expect = e-152
 Identities = 266/386 (68%), Positives = 310/386 (80%), Gaps = 4/386 (1%)
 Frame = +3

Query: 420  LPQLKDATSNEQQELFCQKLQQCCILFDFM-DSVSDLKSKEIKRATLNELVEYVSTNRGV 596
            L  ++D    +Q++LF QKL+QCC+LFDF+ D +SDLK KE+KRA L+E+VEY++ NR V
Sbjct: 27   LLHIRDVPPADQEKLFIQKLRQCCVLFDFVSDPLSDLKWKEVKRAALSEMVEYITHNRNV 86

Query: 597  IVESAYSDIVKMISANIFRTLXXXXXXXXXXXXXXXXXX---ASWPHIQLVYEFFLRFLE 767
            I E  Y + V M + N+FRTL                     A+WPH+QLVYEFFLRFLE
Sbjct: 87   ITEPIYPEAVHMFAVNMFRTLPPSSNPTGAEFDPEEDEPTLEAAWPHLQLVYEFFLRFLE 146

Query: 768  SPDFQPSIAKRYIDQKFVQQLLELFDSEDPRERDFLKTVLHRIYGKFLGLRAFIRKQINN 947
            SPDFQP+IAK+YIDQKFV QLLELFDSEDPRERDFLKT LHRIYGKFLGLRA+IRKQINN
Sbjct: 147  SPDFQPNIAKKYIDQKFVLQLLELFDSEDPRERDFLKTTLHRIYGKFLGLRAYIRKQINN 206

Query: 948  IFLRFIYETEHFNGVAELLEILGSIINGFALPLKAEHKQFLMKVLIPMHTAKGLALFHAQ 1127
            IF RFIYETEH NG+AELLEILGSIINGFALPLK EHK FL+KVL+P+H  K L+++H Q
Sbjct: 207  IFYRFIYETEHHNGIAELLEILGSIINGFALPLKEEHKIFLLKVLLPLHKVKSLSVYHPQ 266

Query: 1128 LAYCVVQFLEKDTTLTEPVIRGLLKFWPKTCSQKEVMFLGEIEEILDVIEPTQFKKIEEP 1307
            LAYCVVQFLEKD+TLTEPV+  LLK+WPKT S KEVMFL E+EEILDVIEP++F KI EP
Sbjct: 267  LAYCVVQFLEKDSTLTEPVVMALLKYWPKTHSPKEVMFLNELEEILDVIEPSEFVKIMEP 326

Query: 1308 LFKQISKCVSSSHFQVAERALYFWNNEYILSLIEENIDKILPIMFGSLYKISKEHWNPTI 1487
            LF+Q++KCVSS HFQVAERALY+WNNEYI+SLI +N  KILPIMF SLY+ SK HWN TI
Sbjct: 327  LFRQLAKCVSSPHFQVAERALYYWNNEYIMSLISDNAAKILPIMFPSLYRNSKTHWNKTI 386

Query: 1488 VALVYNVLKTLMEMNGKLFDDLTSSY 1565
              L+YN LK  MEMN KLFDD T  +
Sbjct: 387  HGLIYNALKLFMEMNQKLFDDCTQQF 412


>ref|NP_001074926.1| serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit
            gamma isoform isoform b [Mus musculus].
          Length = 485

 Score =  537 bits (1384), Expect = e-152
 Identities = 266/386 (68%), Positives = 310/386 (80%), Gaps = 4/386 (1%)
 Frame = +3

Query: 420  LPQLKDATSNEQQELFCQKLQQCCILFDFM-DSVSDLKSKEIKRATLNELVEYVSTNRGV 596
            L  ++D    +Q++LF QKL+QCC+LFDF+ D +SDLK KE+KRA L+E+VEY++ NR V
Sbjct: 27   LLHIRDVPPADQEKLFIQKLRQCCVLFDFVSDPLSDLKWKEVKRAALSEMVEYITHNRNV 86

Query: 597  IVESAYSDIVKMISANIFRTLXXXXXXXXXXXXXXXXXX---ASWPHIQLVYEFFLRFLE 767
            I E  Y + V M + N+FRTL                     A+WPH+QLVYEFFLRFLE
Sbjct: 87   ITEPIYPEAVHMFAVNMFRTLPPSSNPTGAEFDPEEDEPTLEAAWPHLQLVYEFFLRFLE 146

Query: 768  SPDFQPSIAKRYIDQKFVQQLLELFDSEDPRERDFLKTVLHRIYGKFLGLRAFIRKQINN 947
            SPDFQP+IAK+YIDQKFV QLLELFDSEDPRERDFLKT LHRIYGKFLGLRA+IRKQINN
Sbjct: 147  SPDFQPNIAKKYIDQKFVLQLLELFDSEDPRERDFLKTTLHRIYGKFLGLRAYIRKQINN 206

Query: 948  IFLRFIYETEHFNGVAELLEILGSIINGFALPLKAEHKQFLMKVLIPMHTAKGLALFHAQ 1127
            IF RFIYETEH NG+AELLEILGSIINGFALPLK EHK FL+KVL+P+H  K L+++H Q
Sbjct: 207  IFYRFIYETEHHNGIAELLEILGSIINGFALPLKEEHKIFLLKVLLPLHKVKSLSVYHPQ 266

Query: 1128 LAYCVVQFLEKDTTLTEPVIRGLLKFWPKTCSQKEVMFLGEIEEILDVIEPTQFKKIEEP 1307
            LAYCVVQFLEKD+TLTEPV+  LLK+WPKT S KEVMFL E+EEILDVIEP++F KI EP
Sbjct: 267  LAYCVVQFLEKDSTLTEPVVMALLKYWPKTHSPKEVMFLNELEEILDVIEPSEFVKIMEP 326

Query: 1308 LFKQISKCVSSSHFQVAERALYFWNNEYILSLIEENIDKILPIMFGSLYKISKEHWNPTI 1487
            LF+Q++KCVSS HFQVAERALY+WNNEYI+SLI +N  KILPIMF SLY+ SK HWN TI
Sbjct: 327  LFRQLAKCVSSPHFQVAERALYYWNNEYIMSLISDNAAKILPIMFPSLYRNSKTHWNKTI 386

Query: 1488 VALVYNVLKTLMEMNGKLFDDLTSSY 1565
              L+YN LK  MEMN KLFDD T  +
Sbjct: 387  HGLIYNALKLFMEMNQKLFDDCTQQF 412


>ref|NP_036153.2| serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit
            gamma isoform isoform a [Mus musculus].
          Length = 524

 Score =  537 bits (1384), Expect = e-152
 Identities = 266/386 (68%), Positives = 310/386 (80%), Gaps = 4/386 (1%)
 Frame = +3

Query: 420  LPQLKDATSNEQQELFCQKLQQCCILFDFM-DSVSDLKSKEIKRATLNELVEYVSTNRGV 596
            L  ++D    +Q++LF QKL+QCC+LFDF+ D +SDLK KE+KRA L+E+VEY++ NR V
Sbjct: 27   LLHIRDVPPADQEKLFIQKLRQCCVLFDFVSDPLSDLKWKEVKRAALSEMVEYITHNRNV 86

Query: 597  IVESAYSDIVKMISANIFRTLXXXXXXXXXXXXXXXXXX---ASWPHIQLVYEFFLRFLE 767
            I E  Y + V M + N+FRTL                     A+WPH+QLVYEFFLRFLE
Sbjct: 87   ITEPIYPEAVHMFAVNMFRTLPPSSNPTGAEFDPEEDEPTLEAAWPHLQLVYEFFLRFLE 146

Query: 768  SPDFQPSIAKRYIDQKFVQQLLELFDSEDPRERDFLKTVLHRIYGKFLGLRAFIRKQINN 947
            SPDFQP+IAK+YIDQKFV QLLELFDSEDPRERDFLKT LHRIYGKFLGLRA+IRKQINN
Sbjct: 147  SPDFQPNIAKKYIDQKFVLQLLELFDSEDPRERDFLKTTLHRIYGKFLGLRAYIRKQINN 206

Query: 948  IFLRFIYETEHFNGVAELLEILGSIINGFALPLKAEHKQFLMKVLIPMHTAKGLALFHAQ 1127
            IF RFIYETEH NG+AELLEILGSIINGFALPLK EHK FL+KVL+P+H  K L+++H Q
Sbjct: 207  IFYRFIYETEHHNGIAELLEILGSIINGFALPLKEEHKIFLLKVLLPLHKVKSLSVYHPQ 266

Query: 1128 LAYCVVQFLEKDTTLTEPVIRGLLKFWPKTCSQKEVMFLGEIEEILDVIEPTQFKKIEEP 1307
            LAYCVVQFLEKD+TLTEPV+  LLK+WPKT S KEVMFL E+EEILDVIEP++F KI EP
Sbjct: 267  LAYCVVQFLEKDSTLTEPVVMALLKYWPKTHSPKEVMFLNELEEILDVIEPSEFVKIMEP 326

Query: 1308 LFKQISKCVSSSHFQVAERALYFWNNEYILSLIEENIDKILPIMFGSLYKISKEHWNPTI 1487
            LF+Q++KCVSS HFQVAERALY+WNNEYI+SLI +N  KILPIMF SLY+ SK HWN TI
Sbjct: 327  LFRQLAKCVSSPHFQVAERALYYWNNEYIMSLISDNAAKILPIMFPSLYRNSKTHWNKTI 386

Query: 1488 VALVYNVLKTLMEMNGKLFDDLTSSY 1565
              L+YN LK  MEMN KLFDD T  +
Sbjct: 387  HGLIYNALKLFMEMNQKLFDDCTQQF 412


  Database: RefSeq49_MP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 15,617,559
  Number of sequences in database:  30,036
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 59,435,386
Number of extensions: 1305916
Number of successful extensions: 3523
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 3504
Number of HSP's successfully gapped: 8
Length of query: 797
Length of database: 15,617,559
Length adjustment: 109
Effective length of query: 688
Effective length of database: 12,343,635
Effective search space: 8492420880
Effective search space used: 8492420880
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

Search to RefSeqSP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-002863
         (2392 letters)

Database: RefSeq49_SP.fasta 
           24,897 sequences; 11,343,932 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001093662.1| serine/threonine-protein phosphatase 2A 56 k...   759   0.0  
Alignment   gi|XP_003122600.1| PREDICTED: serine/threonine-protein phosphat...   593   e-169
Alignment   gi|NP_001106922.1| serine/threonine-protein phosphatase 2A 56 k...   544   e-154
Alignment   gi|XP_003356857.1| PREDICTED: hypothetical protein LOC100517901...   106   5e-23

>ref|NP_001093662.1| serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit
            alpha isoform [Sus scrofa].
          Length = 487

 Score =  759 bits (1960), Expect = 0.0
 Identities = 395/468 (84%), Positives = 395/468 (84%)
 Frame = +3

Query: 309  EKVDGFTRKSVXXXXXXXXXXXXXXXXXXXXXPELHPLPQLKDATSNEQQELFCQKLQQC 488
            EKVDGFTRKSV                     PELHPLPQLKDATSNEQQELFCQKLQQC
Sbjct: 20   EKVDGFTRKSVRKAQRQKRSQGSSQFRSQGSQPELHPLPQLKDATSNEQQELFCQKLQQC 79

Query: 489  CILFDFMDSVSDLKSKEIKRATLNELVEYVSTNRGVIVESAYSDIVKMISANIFRTLXXX 668
            CILFDFMDSVSDLKSKEIKRATLN LVEYVSTNRGVIVESAYSDIVKMISANIFRTL   
Sbjct: 80   CILFDFMDSVSDLKSKEIKRATLNGLVEYVSTNRGVIVESAYSDIVKMISANIFRTLPPS 139

Query: 669  XXXXXXXXXXXXXXXASWPHIQLVYEFFLRFLESPDFQPSIAKRYIDQKFVQQLLELFDS 848
                           ASWPHIQLVYEFFLRFLESPDFQPSIAKRYIDQKFVQQLLELFDS
Sbjct: 140  DNPDFDPEEDEPTLEASWPHIQLVYEFFLRFLESPDFQPSIAKRYIDQKFVQQLLELFDS 199

Query: 849  EDPRERDFLKTVLHRIYGKFLGLRAFIRKQINNIFLRFIYETEHFNGVAELLEILGSIIN 1028
            EDPRERDFLKTVLHRIYGKFLGLRAFIRKQINNIFLRFIYETEHFNGVAELLEILGSIIN
Sbjct: 200  EDPRERDFLKTVLHRIYGKFLGLRAFIRKQINNIFLRFIYETEHFNGVAELLEILGSIIN 259

Query: 1029 GFALPLKAEHKQFLMKVLIPMHTAKGLALFHAQLAYCVVQFLEKDTTLTEPVIRGLLKFW 1208
            GFALPLKAEHKQFLMKVLIPMHTAKGLALFHAQLAYCVVQFLEKDTTLTEPVIRGLLKFW
Sbjct: 260  GFALPLKAEHKQFLMKVLIPMHTAKGLALFHAQLAYCVVQFLEKDTTLTEPVIRGLLKFW 319

Query: 1209 PKTCSQKEVMFLGEIEEILDVIEPTQFKKIEEPLFKQISKCVSSSHFQVAERALYFWNNE 1388
            PKTCSQKEVMFLGEIEEILDVIEPTQFKKIEEPLFKQISKCVSSSHFQVAERALYFWNNE
Sbjct: 320  PKTCSQKEVMFLGEIEEILDVIEPTQFKKIEEPLFKQISKCVSSSHFQVAERALYFWNNE 379

Query: 1389 YILSLIEENIDKILPIMFGSLYKISKEHWNPTIVALVYNVLKTLMEMNGKLFDDLTSSYX 1568
            YILSLIEENIDKILPIMFGSLYKISKEHWNPTIVALVYNVLKTLMEMNGKLFDDLTSSY 
Sbjct: 380  YILSLIEENIDKILPIMFGSLYKISKEHWNPTIVALVYNVLKTLMEMNGKLFDDLTSSYK 439

Query: 1569 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSAYNMHSILSNTSDE 1712
                                            NSAYNMHSILSNTSDE
Sbjct: 440  AERQREKKKELEREELWKKLEELKLKKALEKQNSAYNMHSILSNTSDE 487


>ref|XP_003122600.1| PREDICTED: serine/threonine-protein phosphatase 2A 56 kDa regulatory
            subunit beta isoform [Sus scrofa].
          Length = 497

 Score =  593 bits (1530), Expect = e-169
 Identities = 290/419 (69%), Positives = 341/419 (81%)
 Frame = +3

Query: 309  EKVDGFTRKSVXXXXXXXXXXXXXXXXXXXXXPELHPLPQLKDATSNEQQELFCQKLQQC 488
            +KVDGF+R+S+                      EL PLP LKD  ++E  EL  +KL QC
Sbjct: 26   DKVDGFSRRSLRRARPRRSHSSSQFRYQSNQQ-ELTPLPLLKDVPASELHELLSRKLAQC 84

Query: 489  CILFDFMDSVSDLKSKEIKRATLNELVEYVSTNRGVIVESAYSDIVKMISANIFRTLXXX 668
             ++FDF+D V+DLK KE+KRA LNELVE V + RGV++E  Y DI++MIS NIFRTL   
Sbjct: 85   GVMFDFLDCVADLKGKEVKRAALNELVECVGSTRGVLIEPVYPDIIRMISVNIFRTLPPS 144

Query: 669  XXXXXXXXXXXXXXXASWPHIQLVYEFFLRFLESPDFQPSIAKRYIDQKFVQQLLELFDS 848
                            SWPH+QLVYEFFLRFLESPDFQPS+AKRY+DQKFV  LLELFDS
Sbjct: 145  ENPEFDPEEDEPNLEPSWPHLQLVYEFFLRFLESPDFQPSVAKRYVDQKFVLMLLELFDS 204

Query: 849  EDPRERDFLKTVLHRIYGKFLGLRAFIRKQINNIFLRFIYETEHFNGVAELLEILGSIIN 1028
            EDPRER++LKT+LHR+YGKFLGLRA+IRKQ ++IFLRFIYE EHFNGVAELLEILGSIIN
Sbjct: 205  EDPREREYLKTILHRVYGKFLGLRAYIRKQCSHIFLRFIYELEHFNGVAELLEILGSIIN 264

Query: 1029 GFALPLKAEHKQFLMKVLIPMHTAKGLALFHAQLAYCVVQFLEKDTTLTEPVIRGLLKFW 1208
            GFALPLK EHKQFL++VLIP+H+ K L++FHAQLAYCVVQFLEKD TLTE VIRGLLK+W
Sbjct: 265  GFALPLKTEHKQFLVRVLIPLHSVKSLSVFHAQLAYCVVQFLEKDATLTEHVIRGLLKYW 324

Query: 1209 PKTCSQKEVMFLGEIEEILDVIEPTQFKKIEEPLFKQISKCVSSSHFQVAERALYFWNNE 1388
            PKTC+QKEVMFLGE+EEILDVIEP+QF KI+EPLFKQ+++CVSS HFQVAERALYFWNNE
Sbjct: 325  PKTCTQKEVMFLGEMEEILDVIEPSQFVKIQEPLFKQVARCVSSPHFQVAERALYFWNNE 384

Query: 1389 YILSLIEENIDKILPIMFGSLYKISKEHWNPTIVALVYNVLKTLMEMNGKLFDDLTSSY 1565
            YILSLIE+N   +LP +FG+LY++SKEHWN TIV+L+YNVLKT MEMNGKLFD+LT+SY
Sbjct: 385  YILSLIEDNCHTVLPAVFGTLYQVSKEHWNQTIVSLIYNVLKTFMEMNGKLFDELTASY 443


>ref|NP_001106922.1| serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit
            delta isoform [Sus scrofa].
          Length = 602

 Score =  544 bits (1401), Expect = e-154
 Identities = 265/390 (67%), Positives = 317/390 (81%), Gaps = 4/390 (1%)
 Frame = +3

Query: 408  ELHPLPQLKDATSNEQQELFCQKLQQCCILFDFM-DSVSDLKSKEIKRATLNELVEYVST 584
            EL  LP LKD+ + E++ELF QKL+QCC+LFDF+ D +SDLK KE+KRA LNE+VEY++ 
Sbjct: 99   ELQKLPALKDSPTQEREELFIQKLRQCCVLFDFVSDPLSDLKFKEVKRAGLNEMVEYITH 158

Query: 585  NRGVIVESAYSDIVKMISANIFRTLXXXXXXXXXXXXXXXXXX---ASWPHIQLVYEFFL 755
            +R V+ E+ Y + V M S N+FRTL                     A+WPH+QLVYEFFL
Sbjct: 159  SRDVVTEAIYPEAVTMFSVNLFRTLPPSSNPTGAEFDPEEDEPTLEAAWPHLQLVYEFFL 218

Query: 756  RFLESPDFQPSIAKRYIDQKFVQQLLELFDSEDPRERDFLKTVLHRIYGKFLGLRAFIRK 935
            RFLESPDFQP+IAK+YIDQKFV  LL+LFDSEDPRERDFLKT+LHRIYGKFLGLRA+IR+
Sbjct: 219  RFLESPDFQPNIAKKYIDQKFVLALLDLFDSEDPRERDFLKTILHRIYGKFLGLRAYIRR 278

Query: 936  QINNIFLRFIYETEHFNGVAELLEILGSIINGFALPLKAEHKQFLMKVLIPMHTAKGLAL 1115
            QIN+IF RFIYETEH NG+AELLEILGSIINGFALPLK EHK FL++VL+P+H  K L++
Sbjct: 279  QINHIFYRFIYETEHHNGIAELLEILGSIINGFALPLKEEHKMFLIRVLLPLHKVKSLSV 338

Query: 1116 FHAQLAYCVVQFLEKDTTLTEPVIRGLLKFWPKTCSQKEVMFLGEIEEILDVIEPTQFKK 1295
            +H QLAYCVVQFLEK+++LTEPVI GLLKFWPKT S KEVMFL E+EEILDVIEP++F K
Sbjct: 339  YHPQLAYCVVQFLEKESSLTEPVIVGLLKFWPKTHSPKEVMFLNELEEILDVIEPSEFSK 398

Query: 1296 IEEPLFKQISKCVSSSHFQVAERALYFWNNEYILSLIEENIDKILPIMFGSLYKISKEHW 1475
            + EPLF+Q++KCVSS HFQVAERALY+WNNEYI+SLI +N  ++LPIMF +LY+ SK HW
Sbjct: 399  VMEPLFRQLAKCVSSPHFQVAERALYYWNNEYIMSLISDNAARVLPIMFPALYRNSKSHW 458

Query: 1476 NPTIVALVYNVLKTLMEMNGKLFDDLTSSY 1565
            N TI  L+YN LK  MEMN KLFDD T  Y
Sbjct: 459  NKTIHGLIYNALKLFMEMNQKLFDDCTQQY 488


>ref|XP_003356857.1| PREDICTED: hypothetical protein LOC100517901 [Sus scrofa].
          Length = 367

 Score =  106 bits (265), Expect = 5e-23
 Identities = 50/72 (69%), Positives = 56/72 (77%)
 Frame = +3

Query: 1350 QVAERALYFWNNEYILSLIEENIDKILPIMFGSLYKISKEHWNPTIVALVYNVLKTLMEM 1529
            QVAERALY+WNNEYI+SLI +N  KILPIMF SLY+ SK HWN TI  L+YN LK  MEM
Sbjct: 259  QVAERALYYWNNEYIMSLISDNAAKILPIMFPSLYRNSKTHWNKTIHGLIYNALKLFMEM 318

Query: 1530 NGKLFDDLTSSY 1565
            N KLFDD T  +
Sbjct: 319  NQKLFDDCTQQF 330


  Database: RefSeq49_SP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 11,343,932
  Number of sequences in database:  24,897
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 43,107,458
Number of extensions: 938909
Number of successful extensions: 2540
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 2533
Number of HSP's successfully gapped: 4
Length of query: 797
Length of database: 11,343,932
Length adjustment: 107
Effective length of query: 690
Effective length of database: 8,679,953
Effective search space: 5989167570
Effective search space used: 5989167570
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

Search to Sscrofa10_2

BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-002863
         (2392 letters)

Database: Sscrofa_10.2.fasta 
           4582 sequences; 2,808,509,378 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Sscrofa_Chr09                                                        1350   0.0  
Sscrofa_Chr01                                                          68   2e-08

>Sscrofa_Chr09 
||          Length = 153670197

 Score = 1350 bits (681), Expect = 0.0
 Identities = 775/812 (95%), Gaps = 4/812 (0%)
 Strand = Plus / Minus

                                                                             
Query: 1581      agggagaaaaagaaggaattggaacgtgaagaattatggaaaaaattagaggagctaaag 1640
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144052763 agggagaaaaagaaggaattggaacgtgaagaattatggaaaaaattagaggagctaaag 144052704

                                                                             
Query: 1641      ctaaagaaagctctagaaaagcagaacagtgcttacaacatgcacagtatcctcagcaat 1700
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144052703 ctaaagaaagctctagaaaagcagaacagtgcttacaacatgcacagtatcctcagcaat 144052644

                                                                             
Query: 1701      acaagcgatgaatnnnnnnngcctgtcacctctgctggataggcggttttgtacactttt 1760
                 |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 144052643 acaagcgatgaataaaaaaagcctgtcacctctgctggataggcggttttgtacactttt 144052584

                                                                             
Query: 1761      ttgaaatgtgtaaaaattatgaaacaaacctcatcagtataatataattaaaaagccaan 1820
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 144052583 ttgaaatgtgtaaaaattatgaaacaaacctcatcagtataatataattaaaaagccaat 144052524

                                                                             
Query: 1821      nnnnnnnnnnnnctggcaactgtaaatgnnnnnnnnnnntatatggactaaacatagccc 1880
                             ||||||||||||||||           |||||||||||||||||||||
Sbjct: 144052523 tttttttttt--ctggcaactgtaaatgaaaaaaaaaa-tatatggactaaacatagccc 144052467

                                                                             
Query: 1881      tgggctatatcatagccacagtatattgtaacctttgtctaatcattgatttgtgtcact 1940
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144052466 tgggctatatcatagccacagtatattgtaacctttgtctaatcattgatttgtgtcact 144052407

                                                                             
Query: 1941      tctgcagtttcacagaaatgaatgaactttatcatctacgatatgagtgaactaattatg 2000
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144052406 tctgcagtttcacagaaatgaatgaactttatcatctacgatatgagtgaactaattatg 144052347

                                                                             
Query: 2001      ggcgtggtgagaatcatgacttgaattctgtttggggttgtgttgcacatagagtagtct 2060
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144052346 ggcgtggtgagaatcatgacttgaattctgtttggggttgtgttgcacatagagtagtct 144052287

                                                                             
Query: 2061      gctctgtatatttttcccttttctaatgtgcttttcacgtcgctgcagaccttagttaca 2120
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144052286 gctctgtatatttttcccttttctaatgtgcttttcacgtcgctgcagaccttagttaca 144052227

                                                                             
Query: 2121      tcctaggaaaaagatgtcctcaaacaaaaccgaggcgtagctctgacaaccttccctcca 2180
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144052226 tcctaggaaaaagatgtcctcaaacaaaaccgaggcgtagctctgacaaccttccctcca 144052167

                                                                             
Query: 2181      tcgcgccccagacacaggagggaggcagtgacctgccctaagcctgcctttgttagagag 2240
                 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144052166 tcgcg-cccagacacaggagggaggcagtgacctgccctaagcctgcctttgttagagag 144052108

                                                                             
Query: 2241      attactgtactctggaattggagcaaaaccttcaatttccaggctctttaaagcacaaat 2300
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144052107 attactgtactctggaattggagcaaaaccttcaatttccaggctctttaaagcacaaat 144052048

                                                                             
Query: 2301      tatgaagaaaagccgggaaagtaaaccagactcctcccccggctcctcgtgaacatcccc 2360
                 ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 144052047 tatgaagaaaagctgggaaagtaaaccagactcctccgccggctcctcgtgaacatcccc 144051988

                                                 
Query: 2361      cttccccggcccttcccggagtgacaagcaca 2392
                 |||||||||| | |||||||||||| ||||||
Sbjct: 144051987 cttccccggcacctcccggagtgacgagcaca 144051956



 Score =  525 bits (265), Expect = e-146
 Identities = 265/265 (100%)
 Strand = Plus / Minus

                                                                             
Query: 171       cctctcccccgcctcctcctcctgccgctgcccgttccgtgcaagcagcagccggagctg 230
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144123515 cctctcccccgcctcctcctcctgccgctgcccgttccgtgcaagcagcagccggagctg 144123456

                                                                             
Query: 231       ccaagcgccagggccgcggagatgtcgtcgtcgtcgccgccgccggcggcggctgccagc 290
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144123455 ccaagcgccagggccgcggagatgtcgtcgtcgtcgccgccgccggcggcggctgccagc 144123396

                                                                             
Query: 291       gccgccatctcggcctcggagaaagtggacggcttcacccggaaatcggtgcgcaaggcg 350
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144123395 gccgccatctcggcctcggagaaagtggacggcttcacccggaaatcggtgcgcaaggcg 144123336

                                                                             
Query: 351       cagaggcagaagcgctctcagggctcgtcgcagttccgcagccagggcagccagccggag 410
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144123335 cagaggcagaagcgctctcagggctcgtcgcagttccgcagccagggcagccagccggag 144123276

                                          
Query: 411       ctgcaccccttgccccagctcaaag 435
                 |||||||||||||||||||||||||
Sbjct: 144123275 ctgcaccccttgccccagctcaaag 144123251



 Score =  394 bits (199), Expect = e-107
 Identities = 199/199 (100%)
 Strand = Plus / Minus

                                                                             
Query: 434       agatgccacttcaaatgaacaacaagaacttttctgtcagaagttgcagcagtgttgcat 493
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144093906 agatgccacttcaaatgaacaacaagaacttttctgtcagaagttgcagcagtgttgcat 144093847

                                                                             
Query: 494       actgtttgatttcatggactctgtttcagacttgaagagcaaagaaattaaaagagcaac 553
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144093846 actgtttgatttcatggactctgtttcagacttgaagagcaaagaaattaaaagagcaac 144093787

                                                                             
Query: 554       attgaatgaactggttgagtatgtttcaactaatcgtggtgtaattgttgaatcagcgta 613
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144093786 attgaatgaactggttgagtatgtttcaactaatcgtggtgtaattgttgaatcagcgta 144093727

                                    
Query: 614       ttctgatatagtaaaaatg 632
                 |||||||||||||||||||
Sbjct: 144093726 ttctgatatagtaaaaatg 144093708



 Score =  270 bits (136), Expect = 3e-69
 Identities = 136/136 (100%)
 Strand = Plus / Minus

                                                                             
Query: 1346      ttttcaggttgcagaaagggcattgtacttctggaataatgaatatattcttagtttgat 1405
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144055064 ttttcaggttgcagaaagggcattgtacttctggaataatgaatatattcttagtttgat 144055005

                                                                             
Query: 1406      tgaggagaacattgataaaattctgccaattatgtttggcagtttgtataaaatctccaa 1465
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144055004 tgaggagaacattgataaaattctgccaattatgtttggcagtttgtataaaatctccaa 144054945

                                 
Query: 1466      agaacactggaatccg 1481
                 ||||||||||||||||
Sbjct: 144054944 agaacactggaatccg 144054929



 Score =  268 bits (135), Expect = 1e-68
 Identities = 135/135 (100%)
 Strand = Plus / Minus

                                                                             
Query: 826       agctcctggagctttttgatagtgaagatcccagagaacgtgacttcctgaagacggttc 885
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144065344 agctcctggagctttttgatagtgaagatcccagagaacgtgacttcctgaagacggttc 144065285

                                                                             
Query: 886       tgcatcgaatttatgggaaatttcttggattaagagcattcatcagaaaacaaattaaca 945
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144065284 tgcatcgaatttatgggaaatttcttggattaagagcattcatcagaaaacaaattaaca 144065225

                                
Query: 946       acatttttctcaggt 960
                 |||||||||||||||
Sbjct: 144065224 acatttttctcaggt 144065210



 Score =  220 bits (111), Expect = 3e-54
 Identities = 111/111 (100%)
 Strand = Plus / Minus

                                                                             
Query: 1017      agtattatcaatggctttgcattgccactgaaagcagaacataaacaatttctaatgaag 1076
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144063139 agtattatcaatggctttgcattgccactgaaagcagaacataaacaatttctaatgaag 144063080

                                                                    
Query: 1077      gttcttattcctatgcatactgcgaaaggattagctttgtttcatgctcag 1127
                 |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144063079 gttcttattcctatgcatactgcgaaaggattagctttgtttcatgctcag 144063029



 Score =  204 bits (103), Expect = 2e-49
 Identities = 103/103 (100%)
 Strand = Plus / Minus

                                                                             
Query: 1481      gaccattgtggcgctggtgtacaacgtgctgaaaaccctcatggagatgaacggcaagct 1540
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144053930 gaccattgtggcgctggtgtacaacgtgctgaaaaccctcatggagatgaacggcaagct 144053871

                                                            
Query: 1541      tttcgatgaccttacgagctcatacaaggctgaaagacaaagg 1583
                 |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144053870 tttcgatgaccttacgagctcatacaaggctgaaagacaaagg 144053828



 Score =  204 bits (103), Expect = 2e-49
 Identities = 117/124 (94%)
 Strand = Plus / Minus

                                                                             
Query: 1231      aggtgatgtttttaggagaaattgaagaaatcttagatgtcattgaaccaacacaattcn 1290
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 144055258 aggtgatgtttttaggagaaattgaagaaatcttagatgtcattgaaccaacacaattca 144055199

                                                                             
Query: 1291      nnnnnnttgaagagcccctttttaagcagatatccaagtgtgtatccagttctcattttc 1350
                       ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144055198 aaaaaattgaagagcccctttttaagcagatatccaagtgtgtatccagttctcattttc 144055139

                     
Query: 1351      aggt 1354
                 ||||
Sbjct: 144055138 aggt 144055135



 Score =  204 bits (103), Expect = 2e-49
 Identities = 103/103 (100%)
 Strand = Plus / Minus

                                                                             
Query: 632       gatcagtgctaacatcttccgaactcttcctccaagtgataatccagattttgatccaga 691
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144090536 gatcagtgctaacatcttccgaactcttcctccaagtgataatccagattttgatccaga 144090477

                                                            
Query: 692       agaggatgagcccacactcgaggcctcttggcctcacatacaa 734
                 |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144090476 agaggatgagcccacactcgaggcctcttggcctcacatacaa 144090434



 Score =  184 bits (93), Expect = 2e-43
 Identities = 93/93 (100%)
 Strand = Plus / Minus

                                                                             
Query: 735       ttggtgtatgaattcttcttaagatttttggagagccctgatttccagcctagcattgcc 794
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144068983 ttggtgtatgaattcttcttaagatttttggagagccctgatttccagcctagcattgcc 144068924

                                                  
Query: 795       aagcgatacattgatcagaaatttgtacaacag 827
                 |||||||||||||||||||||||||||||||||
Sbjct: 144068923 aagcgatacattgatcagaaatttgtacaacag 144068891



 Score =  135 bits (68), Expect = 1e-28
 Identities = 71/72 (98%)
 Strand = Plus / Minus

                                                                             
Query: 1         ccgccctccgtcagccccgggagctcgccgcgcggcgggaaccaggactcgccggccctg 60
                 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 144123685 ccgccctccgtcagccccgggagctcgccgcgcggcggggaccaggactcgccggccctg 144123626

                             
Query: 61        agatgtggccgt 72
                 ||||||||||||
Sbjct: 144123625 agatgtggccgt 144123614



 Score =  129 bits (65), Expect = 8e-27
 Identities = 65/65 (100%)
 Strand = Plus / Minus

                                                                             
Query: 954       ctcaggtttatatatgaaacagagcatttcaatggtgttgctgagctccttgaaatatta 1013
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144064066 ctcaggtttatatatgaaacagagcatttcaatggtgttgctgagctccttgaaatatta 144064007

                      
Query: 1014      ggaag 1018
                 |||||
Sbjct: 144064006 ggaag 144064002



 Score =  115 bits (58), Expect = 1e-22
 Identities = 58/58 (100%)
 Strand = Plus / Minus

                                                                           
Query: 1126      agctagcctactgtgttgtacagttcctggagaaagatacaacactaacagaaccagt 1183
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144062226 agctagcctactgtgttgtacagttcctggagaaagatacaacactaacagaaccagt 144062169



 Score =  107 bits (54), Expect = 3e-20
 Identities = 54/54 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1182      gtgatcagaggattgctgaaattttggccaaaaacatgcagtcagaaagaggtg 1235
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144055578 gtgatcagaggattgctgaaattttggccaaaaacatgcagtcagaaagaggtg 144055525


>Sscrofa_Chr01 
||          Length = 315321322

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 55/62 (88%)
 Strand = Plus / Minus

                                                                             
Query: 957       aggtttatatatgaaacagagcatttcaatggtgttgctgagctccttgaaatattagga 1016
                 |||||| | ||||||||||| |||||||||||||||||||| || || |||||| |||||
Sbjct: 216610880 aggtttgtttatgaaacagaacatttcaatggtgttgctgaactgctggaaatactagga 216610821

                   
Query: 1017      ag 1018
                 ||
Sbjct: 216610820 ag 216610819


  Database: Sscrofa_10.2.fasta
    Posted date:  Nov 16, 2011 10:34 AM
  Number of letters in database: 2,808,509,378
  Number of sequences in database:  4582
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 75,091,116
Number of extensions: 636
Number of successful extensions: 636
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 633
Number of HSP's successfully gapped: 16
Length of query: 2392
Length of database: 2,808,509,378
Length adjustment: 22
Effective length of query: 2370
Effective length of database: 2,808,408,574
Effective search space: 6655928320380
Effective search space used: 6655928320380
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)