Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002888
(1051 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001192534.1| 5'-AMP-activated protein kinase catalytic su... 654 0.0
Alignment gi|XP_002686426.1| PREDICTED: protein kinase, AMP-activated, al... 654 0.0
Alignment gi|NP_001103272.1| 5'-AMP-activated protein kinase catalytic su... 411 e-115
Alignment gi|NP_001179206.1| serine/threonine-protein kinase SIK2 [Bos ta... 286 2e-77
Alignment gi|XP_002693034.1| PREDICTED: salt-inducible kinase 2 [Bos taur... 286 2e-77
Alignment gi|XP_002685202.1| PREDICTED: salt-inducible kinase 1-like [Bos... 275 4e-74
Alignment gi|XP_001788554.1| PREDICTED: salt-inducible kinase 1, partial ... 275 4e-74
Alignment gi|XP_002695456.1| PREDICTED: BR serine/threonine-protein kinas... 274 8e-74
Alignment gi|XP_618200.3| PREDICTED: BR serine/threonine kinase 1 [Bos ta... 274 8e-74
Alignment gi|NP_001179204.2| serine/threonine-protein kinase MARK1 [Bos t... 270 2e-72
>ref|NP_001192534.1| 5'-AMP-activated protein kinase catalytic subunit alpha-2 [Bos
taurus].
Length = 552
Score = 654 bits (1686), Expect = 0.0
Identities = 319/320 (99%), Positives = 319/320 (99%)
Frame = +3
Query: 84 MAEKQKHDGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGK 263
MAEKQKHDGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGK
Sbjct: 1 MAEKQKHDGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGK 60
Query: 264 IKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLF 443
IKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLF
Sbjct: 61 IKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLF 120
Query: 444 QQILSAVDYCHRHMVVHRDLKPENVLLDAQMNAKIADFGLSNMMSDGEFLRTSCGSPNYA 623
QQILSAVDYCHRHMVVHRDLKPENVLLDAQMNAKIADFGLSNMMSDGEFLRTSCGSPNYA
Sbjct: 121 QQILSAVDYCHRHMVVHRDLKPENVLLDAQMNAKIADFGLSNMMSDGEFLRTSCGSPNYA 180
Query: 624 APEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRS 803
APEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRS
Sbjct: 181 APEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRS 240
Query: 804 VATLLMHMLQVDPLKRATIKDIREHEWFKQDLPSYLFPEDPSYDANVIDDEAVKEVCEKF 983
VATLLMHMLQVDPLKRATIKDIREHEWFKQDLPSYLFPEDPSYDANVIDDEAVKEVCEKF
Sbjct: 241 VATLLMHMLQVDPLKRATIKDIREHEWFKQDLPSYLFPEDPSYDANVIDDEAVKEVCEKF 300
Query: 984 ECTESEVMNSLYSGDPQDSL 1043
ECTESEVMNSLYSGDPQD L
Sbjct: 301 ECTESEVMNSLYSGDPQDQL 320
>ref|XP_002686426.1| PREDICTED: protein kinase, AMP-activated, alpha 2 catalytic
subunit-like [Bos taurus].
Length = 552
Score = 654 bits (1686), Expect = 0.0
Identities = 319/320 (99%), Positives = 319/320 (99%)
Frame = +3
Query: 84 MAEKQKHDGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGK 263
MAEKQKHDGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGK
Sbjct: 1 MAEKQKHDGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGK 60
Query: 264 IKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLF 443
IKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLF
Sbjct: 61 IKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLF 120
Query: 444 QQILSAVDYCHRHMVVHRDLKPENVLLDAQMNAKIADFGLSNMMSDGEFLRTSCGSPNYA 623
QQILSAVDYCHRHMVVHRDLKPENVLLDAQMNAKIADFGLSNMMSDGEFLRTSCGSPNYA
Sbjct: 121 QQILSAVDYCHRHMVVHRDLKPENVLLDAQMNAKIADFGLSNMMSDGEFLRTSCGSPNYA 180
Query: 624 APEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRS 803
APEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRS
Sbjct: 181 APEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRS 240
Query: 804 VATLLMHMLQVDPLKRATIKDIREHEWFKQDLPSYLFPEDPSYDANVIDDEAVKEVCEKF 983
VATLLMHMLQVDPLKRATIKDIREHEWFKQDLPSYLFPEDPSYDANVIDDEAVKEVCEKF
Sbjct: 241 VATLLMHMLQVDPLKRATIKDIREHEWFKQDLPSYLFPEDPSYDANVIDDEAVKEVCEKF 300
Query: 984 ECTESEVMNSLYSGDPQDSL 1043
ECTESEVMNSLYSGDPQD L
Sbjct: 301 ECTESEVMNSLYSGDPQDQL 320
>ref|NP_001103272.1| 5'-AMP-activated protein kinase catalytic subunit alpha-1 [Bos
taurus].
Length = 458
Score = 411 bits (1057), Expect = e-115
Identities = 195/230 (84%), Positives = 212/230 (92%)
Frame = +3
Query: 354 MVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAQ 533
MVMEYVSGGELFDYICK+GR++E E+RRLFQQILS VDYCHRHMVVHRDLKPENVLLDA
Sbjct: 1 MVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAH 60
Query: 534 MNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCG 713
MNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWS GVILYALLCG
Sbjct: 61 MNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCG 120
Query: 714 TLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVATLLMHMLQVDPLKRATIKDIREHEWFKQ 893
TLPFDD+HVPTLFKKI G+FY P+YLN SV +LL HMLQVDP+KRATIKDIREHEWFKQ
Sbjct: 121 TLPFDDDHVPTLFKKICDGIFYTPQYLNPSVISLLKHMLQVDPMKRATIKDIREHEWFKQ 180
Query: 894 DLPSYLFPEDPSYDANVIDDEAVKEVCEKFECTESEVMNSLYSGDPQDSL 1043
DLP YLFPEDPSY + +IDDEA+KEVCEKFEC+E EV++ LY+ + QD L
Sbjct: 181 DLPKYLFPEDPSYSSTMIDDEALKEVCEKFECSEEEVLSCLYNRNHQDPL 230
>ref|NP_001179206.1| serine/threonine-protein kinase SIK2 [Bos taurus].
Length = 906
Score = 286 bits (732), Expect = 2e-77
Identities = 140/292 (47%), Positives = 194/292 (66%), Gaps = 5/292 (1%)
Frame = +3
Query: 84 MAEKQKH--DGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVV 257
MA+ +H G V++G Y + TLG G F VK+G H++T +VA+KI+++ ++ +++
Sbjct: 3 MADGPRHLQRGPVRVGFYEIEGTLGKGNFAVVKLGRHRITRTEVAIKIIDKSQLDEVNLE 62
Query: 258 GKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARR 437
KI RE++ +KL HPHIIKLYQV+ T + ++V EY GE+FDY+ HGR+ E EARR
Sbjct: 63 -KIYREVKIMKLLDHPHIIKLYQVMETKSMLYLVTEYAKNGEIFDYLANHGRLNESEARR 121
Query: 438 LFQQILSAVDYCHRHMVVHRDLKPENVLLDAQMNAKIADFGLSNMMSDGEFLRTSCGSPN 617
F QILSAVDYCH +VHRDLK EN+LLD MN KIADFG N GE L T CGSP
Sbjct: 122 KFWQILSAVDYCHGRQIVHRDLKAENLLLDNNMNIKIADFGFGNFFKSGELLATWCGSPP 181
Query: 618 YAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLN 797
YAAPEV G+ Y GP++DIWS GV+LY L+CG LPFD +P L +++ G F IP +++
Sbjct: 182 YAAPEVFEGQQYEGPQLDIWSMGVVLYVLVCGALPFDGPTLPILRQRVLEGRFRIPYFMS 241
Query: 798 RSVATLLMHMLQVDPLKRATIKDIREHEWFKQDLP---SYLFPEDPSYDANV 944
L+ ML +DP KR TI I+EH+W ++P L+P++ + ++
Sbjct: 242 EDCEHLIRRMLVLDPAKRLTIAQIKEHKWMLVEVPVQRPVLYPQEQENEPSI 293
>ref|XP_002693034.1| PREDICTED: salt-inducible kinase 2 [Bos taurus].
Length = 906
Score = 286 bits (732), Expect = 2e-77
Identities = 140/292 (47%), Positives = 194/292 (66%), Gaps = 5/292 (1%)
Frame = +3
Query: 84 MAEKQKH--DGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVV 257
MA+ +H G V++G Y + TLG G F VK+G H++T +VA+KI+++ ++ +++
Sbjct: 3 MADGPRHLQRGPVRVGFYEIEGTLGKGNFAVVKLGRHRITRTEVAIKIIDKSQLDEVNLE 62
Query: 258 GKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARR 437
KI RE++ +KL HPHIIKLYQV+ T + ++V EY GE+FDY+ HGR+ E EARR
Sbjct: 63 -KIYREVKIMKLLDHPHIIKLYQVMETKSMLYLVTEYAKNGEIFDYLANHGRLNESEARR 121
Query: 438 LFQQILSAVDYCHRHMVVHRDLKPENVLLDAQMNAKIADFGLSNMMSDGEFLRTSCGSPN 617
F QILSAVDYCH +VHRDLK EN+LLD MN KIADFG N GE L T CGSP
Sbjct: 122 KFWQILSAVDYCHGRQIVHRDLKAENLLLDNNMNIKIADFGFGNFFKSGELLATWCGSPP 181
Query: 618 YAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLN 797
YAAPEV G+ Y GP++DIWS GV+LY L+CG LPFD +P L +++ G F IP +++
Sbjct: 182 YAAPEVFEGQQYEGPQLDIWSMGVVLYVLVCGALPFDGPTLPILRQRVLEGRFRIPYFMS 241
Query: 798 RSVATLLMHMLQVDPLKRATIKDIREHEWFKQDLP---SYLFPEDPSYDANV 944
L+ ML +DP KR TI I+EH+W ++P L+P++ + ++
Sbjct: 242 EDCEHLIRRMLVLDPAKRLTIAQIKEHKWMLVEVPVQRPVLYPQEQENEPSI 293
>ref|XP_002685202.1| PREDICTED: salt-inducible kinase 1-like [Bos taurus].
Length = 1083
Score = 275 bits (704), Expect = 4e-74
Identities = 135/290 (46%), Positives = 191/290 (65%)
Frame = +3
Query: 63 ARLRAPNMAEKQKHDGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIR 242
+ L A Q +++G Y + TLG G F VK+ H++T +VA+KI+++ ++
Sbjct: 5 SELSAAPAGSGQGQQKPLRVGFYDIERTLGKGNFAVVKLARHRVTKTQVAIKIIDKARLD 64
Query: 243 SLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEE 422
S ++ KI RE+Q +KL HPHIIKLYQV+ T ++V E+ GE+FDY+ +G + E
Sbjct: 65 SSNLE-KIYREVQIMKLLNHPHIIKLYQVMETKDMLYIVTEFAKNGEMFDYLTSNGHLSE 123
Query: 423 MEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAQMNAKIADFGLSNMMSDGEFLRTS 602
EAR+ F QILSAV+YCH H +VHRDLK EN+LLD M+ K+ADFG N + GE L T
Sbjct: 124 SEARKKFWQILSAVEYCHSHNIVHRDLKTENLLLDDNMDIKLADFGFGNFYNPGEPLSTW 183
Query: 603 CGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYI 782
CGSP YAAPEV G+ Y GP++DIWS GV+LY L+CG+LPFD ++P L +++ G F I
Sbjct: 184 CGSPPYAAPEVFEGKEYEGPQLDIWSLGVVLYVLVCGSLPFDGPNLPALRQRVLEGRFRI 243
Query: 783 PEYLNRSVATLLMHMLQVDPLKRATIKDIREHEWFKQDLPSYLFPEDPSY 932
P +++R TL+ ML V+P KR TI IR+H W + + P+ + P P +
Sbjct: 244 PFFMSRDCETLIRRMLVVEPAKRITIAQIRQHRWMQAE-PALVLPACPGF 292
>ref|XP_001788554.1| PREDICTED: salt-inducible kinase 1, partial [Bos taurus].
Length = 594
Score = 275 bits (704), Expect = 4e-74
Identities = 135/290 (46%), Positives = 191/290 (65%)
Frame = +3
Query: 63 ARLRAPNMAEKQKHDGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIR 242
+ L A Q +++G Y + TLG G F VK+ H++T +VA+KI+++ ++
Sbjct: 5 SELSAAPAGSGQGQQKPLRVGFYDIERTLGKGNFAVVKLARHRVTKTQVAIKIIDKARLD 64
Query: 243 SLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEE 422
S ++ KI RE+Q +KL HPHIIKLYQV+ T ++V E+ GE+FDY+ +G + E
Sbjct: 65 SSNLE-KIYREVQIMKLLNHPHIIKLYQVMETKDMLYIVTEFAKNGEMFDYLTSNGHLSE 123
Query: 423 MEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAQMNAKIADFGLSNMMSDGEFLRTS 602
EAR+ F QILSAV+YCH H +VHRDLK EN+LLD M+ K+ADFG N + GE L T
Sbjct: 124 SEARKKFWQILSAVEYCHSHNIVHRDLKTENLLLDDNMDIKLADFGFGNFYNPGEPLSTW 183
Query: 603 CGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYI 782
CGSP YAAPEV G+ Y GP++DIWS GV+LY L+CG+LPFD ++P L +++ G F I
Sbjct: 184 CGSPPYAAPEVFEGKEYEGPQLDIWSLGVVLYVLVCGSLPFDGPNLPALRQRVLEGRFRI 243
Query: 783 PEYLNRSVATLLMHMLQVDPLKRATIKDIREHEWFKQDLPSYLFPEDPSY 932
P +++R TL+ ML V+P KR TI IR+H W + + P+ + P P +
Sbjct: 244 PFFMSRDCETLIRRMLVVEPAKRITIAQIRQHRWMQAE-PALVLPACPGF 292
>ref|XP_002695456.1| PREDICTED: BR serine/threonine-protein kinase 1-like [Bos taurus].
Length = 826
Score = 274 bits (701), Expect = 8e-74
Identities = 128/256 (50%), Positives = 184/256 (71%)
Frame = +3
Query: 120 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFR 299
+G Y L TLG G G VK+G H +TG KVA+KI+NR+K+ S V+ K++REI LKL
Sbjct: 80 VGPYRLEKTLGKGQTGLVKLGVHCITGQKVAIKIVNREKL-SESVLMKVEREIAILKLIE 138
Query: 300 HPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHR 479
HPH++KL+ V ++V+E+VSGGELFDY+ K GR+ EAR+ F+QI+SA+D+CH
Sbjct: 139 HPHVLKLHDVYENKKYLYLVLEHVSGGELFDYLVKKGRLTPKEARKFFRQIVSALDFCHS 198
Query: 480 HMVVHRDLKPENVLLDAQMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAG 659
+ + HRDLKPEN+LLD + N +IADFG++++ L TSCGSP+YA PEVI G Y G
Sbjct: 199 YSICHRDLKPENLLLDEKNNIRIADFGMASLQVGDSLLETSCGSPHYACPEVIKGEKYDG 258
Query: 660 PEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVATLLMHMLQVD 839
D+WSCGVIL+ALL G LPFDD+++ L +K++ GVF++P ++ +LL M++V+
Sbjct: 259 RRADMWSCGVILFALLVGALPFDDDNLRQLLEKVKRGVFHMPHFIPPDCQSLLRGMIEVE 318
Query: 840 PLKRATIKDIREHEWF 887
P KR +++ I++H W+
Sbjct: 319 PEKRLSLEQIQKHPWY 334
>ref|XP_618200.3| PREDICTED: BR serine/threonine kinase 1 [Bos taurus].
Length = 826
Score = 274 bits (701), Expect = 8e-74
Identities = 128/256 (50%), Positives = 184/256 (71%)
Frame = +3
Query: 120 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFR 299
+G Y L TLG G G VK+G H +TG KVA+KI+NR+K+ S V+ K++REI LKL
Sbjct: 80 VGPYRLEKTLGKGQTGLVKLGVHCITGQKVAIKIVNREKL-SESVLMKVEREIAILKLIE 138
Query: 300 HPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHR 479
HPH++KL+ V ++V+E+VSGGELFDY+ K GR+ EAR+ F+QI+SA+D+CH
Sbjct: 139 HPHVLKLHDVYENKKYLYLVLEHVSGGELFDYLVKKGRLTPKEARKFFRQIVSALDFCHS 198
Query: 480 HMVVHRDLKPENVLLDAQMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAG 659
+ + HRDLKPEN+LLD + N +IADFG++++ L TSCGSP+YA PEVI G Y G
Sbjct: 199 YSICHRDLKPENLLLDEKNNIRIADFGMASLQVGDSLLETSCGSPHYACPEVIKGEKYDG 258
Query: 660 PEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVATLLMHMLQVD 839
D+WSCGVIL+ALL G LPFDD+++ L +K++ GVF++P ++ +LL M++V+
Sbjct: 259 RRADMWSCGVILFALLVGALPFDDDNLRQLLEKVKRGVFHMPHFIPPDCQSLLRGMIEVE 318
Query: 840 PLKRATIKDIREHEWF 887
P KR +++ I++H W+
Sbjct: 319 PEKRLSLEQIQKHPWY 334
>ref|NP_001179204.2| serine/threonine-protein kinase MARK1 [Bos taurus].
Length = 795
Score = 270 bits (690), Expect = 2e-72
Identities = 134/287 (46%), Positives = 191/287 (66%), Gaps = 5/287 (1%)
Frame = +3
Query: 105 DGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQN 284
D + IG+Y L T+G G F KVK+ H LTG +VAVKI+++ ++ + K+ RE++
Sbjct: 52 DEQPHIGNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQ-KLFREVRI 110
Query: 285 LKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAV 464
+K+ HP+I+KL++VI T ++VMEY SGGE+FDY+ HGR++E EAR F+QI+SAV
Sbjct: 111 MKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAV 170
Query: 465 DYCHRHMVVHRDLKPENVLLDAQMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISG 644
YCH+ +VHRDLK EN+LLDA MN KIADFG SN + G L T CGSP YAAPE+ G
Sbjct: 171 QYCHQKCIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGNKLDTFCGSPPYAAPELFQG 230
Query: 645 RLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVATLLMH 824
+ Y GPEVD+WS GVILY L+ G+LPFD +++ L +++ G + IP Y++ LL
Sbjct: 231 KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKK 290
Query: 825 MLQVDPLKRATIKDIREHEWF-----KQDLPSYLFPEDPSYDANVID 950
+L ++P+KR +++ I + W +++L Y PE D ID
Sbjct: 291 LLVLNPIKRGSLEQIMKDRWMNVGHEEEELKPYAEPEPDFNDTKRID 337
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 35,143,939
Number of extensions: 902355
Number of successful extensions: 4023
Number of sequences better than 1.0e-05: 646
Number of HSP's gapped: 2924
Number of HSP's successfully gapped: 672
Length of query: 350
Length of database: 17,681,374
Length adjustment: 103
Effective length of query: 247
Effective length of database: 14,273,310
Effective search space: 3525507570
Effective search space used: 3525507570
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002888
(1051 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_546691.2| PREDICTED: similar to 5-AMP-activated protein k... 587 e-168
Alignment gi|XP_536491.2| PREDICTED: similar to protein kinase, AMP-activ... 510 e-145
Alignment gi|XP_546528.2| PREDICTED: similar to SNF1-like kinase 2 [Canis... 286 2e-77
Alignment gi|XP_541413.2| PREDICTED: similar to BR serine/threonine-prote... 274 9e-74
Alignment gi|XP_544912.2| PREDICTED: similar to Serine/threonine-protein ... 273 2e-73
Alignment gi|XP_536123.2| PREDICTED: similar to Serine/threonine-protein ... 270 2e-72
Alignment gi|XP_868656.1| PREDICTED: similar to MAP/microtubule affinity-... 266 2e-71
Alignment gi|XP_868655.1| PREDICTED: similar to MAP/microtubule affinity-... 266 2e-71
Alignment gi|XP_868654.1| PREDICTED: similar to MAP/microtubule affinity-... 266 2e-71
Alignment gi|XP_868652.1| PREDICTED: similar to MAP/microtubule affinity-... 266 2e-71
>ref|XP_546691.2| PREDICTED: similar to 5-AMP-activated protein kinase, catalytic
alpha-2 chain (AMPK alpha-2 chain) [Canis familiaris].
Length = 722
Score = 587 bits (1512), Expect = e-168
Identities = 285/289 (98%), Positives = 287/289 (99%)
Frame = +3
Query: 177 IGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFM 356
+GEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFM
Sbjct: 202 VGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFM 261
Query: 357 VMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAQM 536
VMEYVSGGELFDYICKHGRVEE+EARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDA M
Sbjct: 262 VMEYVSGGELFDYICKHGRVEEVEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHM 321
Query: 537 NAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGT 716
NAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGT
Sbjct: 322 NAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGT 381
Query: 717 LPFDDEHVPTLFKKIRGGVFYIPEYLNRSVATLLMHMLQVDPLKRATIKDIREHEWFKQD 896
LPFDDEHVPTLFKKIRGGVFYIPEYLNRSVATLLMHMLQVDPLKRATIKDIREHEWFKQD
Sbjct: 382 LPFDDEHVPTLFKKIRGGVFYIPEYLNRSVATLLMHMLQVDPLKRATIKDIREHEWFKQD 441
Query: 897 LPSYLFPEDPSYDANVIDDEAVKEVCEKFECTESEVMNSLYSGDPQDSL 1043
LPSYLFPEDPSYDANVIDDEAVKEVCEKFECTESEVMNSLYSGDPQD L
Sbjct: 442 LPSYLFPEDPSYDANVIDDEAVKEVCEKFECTESEVMNSLYSGDPQDQL 490
>ref|XP_536491.2| PREDICTED: similar to protein kinase, AMP-activated, alpha 1
catalytic subunit isoform 2 [Canis familiaris].
Length = 563
Score = 510 bits (1314), Expect = e-145
Identities = 250/307 (81%), Positives = 271/307 (88%), Gaps = 15/307 (4%)
Frame = +3
Query: 168 KVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTD 347
K IG+H+LTGHKVAVKILNRQKIRSLDVVGKI+REIQNLKLFRHPHIIKLYQVISTP+D
Sbjct: 29 KYVIGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSD 88
Query: 348 FFMVMEYVSGGELFDYICKHGR---------------VEEMEARRLFQQILSAVDYCHRH 482
FMVMEYVSGGELFDYICK+GR ++E E+RRLFQQILS VDYCHRH
Sbjct: 89 IFMVMEYVSGGELFDYICKNGRKSDVPGVVRTGFMKELDEKESRRLFQQILSGVDYCHRH 148
Query: 483 MVVHRDLKPENVLLDAQMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGP 662
MVVHRDLKPENVLLDA MNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGP
Sbjct: 149 MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGP 208
Query: 663 EVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVATLLMHMLQVDP 842
EVDIWS GVILYALLCGTLPFDD+HVPTLFKKI G+FY P+YLN SV +LL HMLQVDP
Sbjct: 209 EVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQYLNPSVISLLKHMLQVDP 268
Query: 843 LKRATIKDIREHEWFKQDLPSYLFPEDPSYDANVIDDEAVKEVCEKFECTESEVMNSLYS 1022
+KRATIKDIREHEWFKQDLP YLFPEDPSY + +IDDEA+KEVCEKFEC+E EV++ LY+
Sbjct: 269 MKRATIKDIREHEWFKQDLPKYLFPEDPSYSSTMIDDEALKEVCEKFECSEEEVLSCLYN 328
Query: 1023 GDPQDSL 1043
+ QD L
Sbjct: 329 RNHQDPL 335
>ref|XP_546528.2| PREDICTED: similar to SNF1-like kinase 2 [Canis familiaris].
Length = 993
Score = 286 bits (732), Expect = 2e-77
Identities = 144/317 (45%), Positives = 204/317 (64%), Gaps = 6/317 (1%)
Frame = +3
Query: 84 MAEKQKH--DGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVV 257
MA+ KH G V++G Y + TLG G F VK+G H++T +VA+KI+++ ++ ++++
Sbjct: 78 MADGPKHLQRGPVRVGFYDIEGTLGKGNFAVVKLGRHRITKTEVAIKIIDKSQLDAVNLE 137
Query: 258 GKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARR 437
KI RE+Q +K+ HPHIIKLYQV+ T ++V EY GE+FDY+ HGR+ E EARR
Sbjct: 138 -KIYREVQIMKMLDHPHIIKLYQVMETKNMLYLVTEYAKNGEIFDYLANHGRLNESEARR 196
Query: 438 LFQQILSAVDYCHRHMVVHRDLKPENVLLDAQMNAKIADFGLSNMMSDGEFLRTSCGSPN 617
F QILSAVDYCH +VHRDLK EN+LLD+ MN K+ADFG N GE L T CGSP
Sbjct: 197 KFWQILSAVDYCHGRKIVHRDLKAENLLLDSNMNIKLADFGFGNFFKSGELLATWCGSPP 256
Query: 618 YAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLN 797
YAAPEV G+ Y GP++DIWS GV+LY L+CG LPFD +P L +++ G F IP +++
Sbjct: 257 YAAPEVFEGQQYEGPQLDIWSMGVVLYVLVCGALPFDGPTLPILRQRVLEGRFRIPYFMS 316
Query: 798 RSVATLLMHMLQVDPLKRATIKDIREHEWFKQDLP---SYLFPEDPSYDANVID-DEAVK 965
L+ ML +DP KR TI I+EH+W ++P L+P+ + ++ + +E V
Sbjct: 317 EDCEHLIRRMLVLDPSKRLTIAQIKEHKWMLIEVPVQRPVLYPQGQENEPSIGEFNEQVL 376
Query: 966 EVCEKFECTESEVMNSL 1016
+ + + + SL
Sbjct: 377 RLMHSLGIDQQKTIESL 393
>ref|XP_541413.2| PREDICTED: similar to BR serine/threonine-protein kinase 1 (SAD1
kinase) (SAD1A) [Canis familiaris].
Length = 801
Score = 274 bits (701), Expect = 9e-74
Identities = 128/256 (50%), Positives = 184/256 (71%)
Frame = +3
Query: 120 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFR 299
+G Y L TLG G G VK+G H +TG KVA+KI+NR+K+ S V+ K++REI LKL
Sbjct: 54 VGPYRLEKTLGKGQTGLVKLGVHCITGQKVAIKIVNREKL-SESVLMKVEREIAILKLIE 112
Query: 300 HPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHR 479
HPH++KL+ V ++V+E+VSGGELFDY+ K GR+ EAR+ F+QI+SA+D+CH
Sbjct: 113 HPHVLKLHDVYENKKYLYLVLEHVSGGELFDYLVKKGRLTPKEARKFFRQIVSALDFCHS 172
Query: 480 HMVVHRDLKPENVLLDAQMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAG 659
+ + HRDLKPEN+LLD + N +IADFG++++ L TSCGSP+YA PEVI G Y G
Sbjct: 173 YSICHRDLKPENLLLDEKNNIRIADFGMASLQVGDSLLETSCGSPHYACPEVIKGEKYDG 232
Query: 660 PEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVATLLMHMLQVD 839
D+WSCGVIL+ALL G LPFDD+++ L +K++ GVF++P ++ +LL M++V+
Sbjct: 233 RRADMWSCGVILFALLVGALPFDDDNLRQLLEKVKRGVFHMPHFIPPDCQSLLRGMIEVE 292
Query: 840 PLKRATIKDIREHEWF 887
P KR +++ I++H W+
Sbjct: 293 PEKRLSLEQIQKHPWY 308
>ref|XP_544912.2| PREDICTED: similar to Serine/threonine-protein kinase SNF1-like
kinase 1 (Serine/threonine-protein kinase SNF1LK)
(Salt-inducible protein kinase) (Protein kinase KID2)
[Canis familiaris].
Length = 898
Score = 273 bits (698), Expect = 2e-73
Identities = 130/261 (49%), Positives = 180/261 (68%)
Frame = +3
Query: 114 VKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKL 293
+++G Y + TLG G F VK+ H++T +VA+KI+++ ++ S ++ KI RE+Q +KL
Sbjct: 147 LRVGFYDVERTLGKGNFAVVKLARHRVTKTQVAIKIIDKTRLDSSNLE-KIYREVQIMKL 205
Query: 294 FRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYC 473
HPHIIKLYQV+ T ++V E+ GE+FDY+ +G + E EAR+ F QILSAV+YC
Sbjct: 206 LNHPHIIKLYQVMETKDMLYIVTEFAKNGEMFDYLTSNGHLSENEARKKFWQILSAVEYC 265
Query: 474 HRHMVVHRDLKPENVLLDAQMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLY 653
H H +VHRDLK EN+LLD M+ K+ADFG N GE L T CGSP YAAPEV G+ Y
Sbjct: 266 HSHHIVHRDLKTENLLLDGSMDIKLADFGFGNFYKSGEPLSTWCGSPPYAAPEVFEGKEY 325
Query: 654 AGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVATLLMHMLQ 833
GP++DIWS GV+LY L+CG+LPFD ++P L +++ G F IP ++++ TL+ ML
Sbjct: 326 EGPQLDIWSLGVVLYVLVCGSLPFDGPNLPALRQRVLEGRFRIPFFMSQGCETLIRRMLV 385
Query: 834 VDPLKRATIKDIREHEWFKQD 896
VDP KR TI IR+H W + D
Sbjct: 386 VDPTKRITIAQIRQHRWMQAD 406
>ref|XP_536123.2| PREDICTED: similar to Serine/threonine-protein kinase MARK1
(MAP/microtubule affinity-regulating kinase 1) [Canis
familiaris].
Length = 782
Score = 270 bits (690), Expect = 2e-72
Identities = 134/287 (46%), Positives = 191/287 (66%), Gaps = 5/287 (1%)
Frame = +3
Query: 105 DGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQN 284
D + IG+Y L T+G G F KVK+ H LTG +VAVKI+++ ++ + K+ RE++
Sbjct: 39 DEQPHIGNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQ-KLFREVRI 97
Query: 285 LKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAV 464
+K+ HP+I+KL++VI T ++VMEY SGGE+FDY+ HGR++E EAR F+QI+SAV
Sbjct: 98 MKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAV 157
Query: 465 DYCHRHMVVHRDLKPENVLLDAQMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISG 644
YCH+ +VHRDLK EN+LLDA MN KIADFG SN + G L T CGSP YAAPE+ G
Sbjct: 158 QYCHQKCIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGNKLDTFCGSPPYAAPELFQG 217
Query: 645 RLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVATLLMH 824
+ Y GPEVD+WS GVILY L+ G+LPFD +++ L +++ G + IP Y++ LL
Sbjct: 218 KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKK 277
Query: 825 MLQVDPLKRATIKDIREHEWF-----KQDLPSYLFPEDPSYDANVID 950
+L ++P+KR +++ I + W +++L Y PE D ID
Sbjct: 278 LLVLNPIKRGSLEQIMKDRWMNVGHEEEELKPYAEPEPDFNDTKRID 324
>ref|XP_868656.1| PREDICTED: similar to MAP/microtubule affinity-regulating kinase 3
isoform 23 [Canis familiaris].
Length = 713
Score = 266 bits (681), Expect = 2e-71
Identities = 134/293 (45%), Positives = 193/293 (65%), Gaps = 5/293 (1%)
Frame = +3
Query: 87 AEKQKHDGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKI 266
A++Q H IG+Y L T+G G F KVK+ H LTG +VA+KI+++ ++ + K+
Sbjct: 47 ADEQPH-----IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQ-KL 100
Query: 267 KREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQ 446
RE++ +K+ HP+I+KL++VI T +++MEY SGGE+FDY+ HGR++E EAR F+
Sbjct: 101 FREVRIMKILNHPNIVKLFEVIETDKTLYLIMEYASGGEVFDYLVAHGRMKEKEARAKFR 160
Query: 447 QILSAVDYCHRHMVVHRDLKPENVLLDAQMNAKIADFGLSNMMSDGEFLRTSCGSPNYAA 626
QI+SAV YCH+ +VHRDLK EN+LLDA MN KIADFG SN + G L T CGSP YAA
Sbjct: 161 QIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGSKLDTFCGSPPYAA 220
Query: 627 PEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSV 806
PE+ G+ Y GPEVD+WS GVILY L+ G+LPFD +++ L +++ G + IP Y++
Sbjct: 221 PELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDC 280
Query: 807 ATLLMHMLQVDPLKRATIKDIREHEWF-----KQDLPSYLFPEDPSYDANVID 950
LL L ++P+KR T++ I + W + +L ++ PE D ID
Sbjct: 281 ENLLKRFLVLNPIKRGTLEQIMKDRWINAGHEEDELKPFVEPELDISDQKRID 333
>ref|XP_868655.1| PREDICTED: similar to MAP/microtubule affinity-regulating kinase 3
isoform 1 isoform 22 [Canis familiaris].
Length = 744
Score = 266 bits (681), Expect = 2e-71
Identities = 134/293 (45%), Positives = 193/293 (65%), Gaps = 5/293 (1%)
Frame = +3
Query: 87 AEKQKHDGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKI 266
A++Q H IG+Y L T+G G F KVK+ H LTG +VA+KI+++ ++ + K+
Sbjct: 47 ADEQPH-----IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQ-KL 100
Query: 267 KREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQ 446
RE++ +K+ HP+I+KL++VI T +++MEY SGGE+FDY+ HGR++E EAR F+
Sbjct: 101 FREVRIMKILNHPNIVKLFEVIETDKTLYLIMEYASGGEVFDYLVAHGRMKEKEARAKFR 160
Query: 447 QILSAVDYCHRHMVVHRDLKPENVLLDAQMNAKIADFGLSNMMSDGEFLRTSCGSPNYAA 626
QI+SAV YCH+ +VHRDLK EN+LLDA MN KIADFG SN + G L T CGSP YAA
Sbjct: 161 QIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGSKLDTFCGSPPYAA 220
Query: 627 PEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSV 806
PE+ G+ Y GPEVD+WS GVILY L+ G+LPFD +++ L +++ G + IP Y++
Sbjct: 221 PELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDC 280
Query: 807 ATLLMHMLQVDPLKRATIKDIREHEWF-----KQDLPSYLFPEDPSYDANVID 950
LL L ++P+KR T++ I + W + +L ++ PE D ID
Sbjct: 281 ENLLKRFLVLNPIKRGTLEQIMKDRWINAGHEEDELKPFVEPELDISDQKRID 333
>ref|XP_868654.1| PREDICTED: similar to MAP/microtubule affinity-regulating kinase 3
(Cdc25C-associated protein kinase 1) (cTAK1) (C-TAK1)
(Serine/threonine protein kinase p78) (Ser/Thr protein
kinase PAR-1) (Protein kinase STK10) isoform 21 [Canis
familiaris].
Length = 753
Score = 266 bits (681), Expect = 2e-71
Identities = 134/293 (45%), Positives = 193/293 (65%), Gaps = 5/293 (1%)
Frame = +3
Query: 87 AEKQKHDGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKI 266
A++Q H IG+Y L T+G G F KVK+ H LTG +VA+KI+++ ++ + K+
Sbjct: 47 ADEQPH-----IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQ-KL 100
Query: 267 KREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQ 446
RE++ +K+ HP+I+KL++VI T +++MEY SGGE+FDY+ HGR++E EAR F+
Sbjct: 101 FREVRIMKILNHPNIVKLFEVIETDKTLYLIMEYASGGEVFDYLVAHGRMKEKEARAKFR 160
Query: 447 QILSAVDYCHRHMVVHRDLKPENVLLDAQMNAKIADFGLSNMMSDGEFLRTSCGSPNYAA 626
QI+SAV YCH+ +VHRDLK EN+LLDA MN KIADFG SN + G L T CGSP YAA
Sbjct: 161 QIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGSKLDTFCGSPPYAA 220
Query: 627 PEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSV 806
PE+ G+ Y GPEVD+WS GVILY L+ G+LPFD +++ L +++ G + IP Y++
Sbjct: 221 PELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDC 280
Query: 807 ATLLMHMLQVDPLKRATIKDIREHEWF-----KQDLPSYLFPEDPSYDANVID 950
LL L ++P+KR T++ I + W + +L ++ PE D ID
Sbjct: 281 ENLLKRFLVLNPIKRGTLEQIMKDRWINAGHEEDELKPFVEPELDISDQKRID 333
>ref|XP_868652.1| PREDICTED: similar to MAP/microtubule affinity-regulating kinase 3
(Cdc25C-associated protein kinase 1) (cTAK1) (C-TAK1)
(Serine/threonine protein kinase p78) (Ser/Thr protein
kinase PAR-1) (Protein kinase STK10) isoform 19 [Canis
familiaris].
Length = 738
Score = 266 bits (681), Expect = 2e-71
Identities = 134/293 (45%), Positives = 193/293 (65%), Gaps = 5/293 (1%)
Frame = +3
Query: 87 AEKQKHDGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKI 266
A++Q H IG+Y L T+G G F KVK+ H LTG +VA+KI+++ ++ + K+
Sbjct: 47 ADEQPH-----IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQ-KL 100
Query: 267 KREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQ 446
RE++ +K+ HP+I+KL++VI T +++MEY SGGE+FDY+ HGR++E EAR F+
Sbjct: 101 FREVRIMKILNHPNIVKLFEVIETDKTLYLIMEYASGGEVFDYLVAHGRMKEKEARAKFR 160
Query: 447 QILSAVDYCHRHMVVHRDLKPENVLLDAQMNAKIADFGLSNMMSDGEFLRTSCGSPNYAA 626
QI+SAV YCH+ +VHRDLK EN+LLDA MN KIADFG SN + G L T CGSP YAA
Sbjct: 161 QIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGSKLDTFCGSPPYAA 220
Query: 627 PEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSV 806
PE+ G+ Y GPEVD+WS GVILY L+ G+LPFD +++ L +++ G + IP Y++
Sbjct: 221 PELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDC 280
Query: 807 ATLLMHMLQVDPLKRATIKDIREHEWF-----KQDLPSYLFPEDPSYDANVID 950
LL L ++P+KR T++ I + W + +L ++ PE D ID
Sbjct: 281 ENLLKRFLVLNPIKRGTLEQIMKDRWINAGHEEDELKPFVEPELDISDQKRID 333
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 36,348,995
Number of extensions: 882552
Number of successful extensions: 4953
Number of sequences better than 1.0e-05: 929
Number of HSP's gapped: 3414
Number of HSP's successfully gapped: 951
Length of query: 350
Length of database: 18,874,504
Length adjustment: 104
Effective length of query: 246
Effective length of database: 15,407,560
Effective search space: 3790259760
Effective search space used: 3790259760
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002888
(1051 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_006243.2| 5'-AMP-activated protein kinase catalytic subun... 652 0.0
Alignment gi|NP_006242.5| 5'-AMP-activated protein kinase catalytic subun... 580 e-166
Alignment gi|NP_996790.3| 5'-AMP-activated protein kinase catalytic subun... 570 e-163
Alignment gi|NP_056006.1| serine/threonine-protein kinase SIK2 [Homo sapi... 286 2e-77
Alignment gi|NP_115806.1| BR serine/threonine-protein kinase 1 [Homo sapi... 274 9e-74
Alignment gi|NP_775490.2| serine/threonine-protein kinase SIK1 [Homo sapi... 273 1e-73
Alignment gi|NP_003948.2| BR serine/threonine-protein kinase 2 [Homo sapi... 272 3e-73
Alignment gi|NP_079440.2| serine/threonine-protein kinase SIK3 [Homo sapi... 268 5e-72
Alignment gi|NP_061120.3| serine/threonine-protein kinase MARK1 [Homo sap... 267 1e-71
Alignment gi|NP_001122392.1| MAP/microtubule affinity-regulating kinase 3... 266 3e-71
>ref|NP_006243.2| 5'-AMP-activated protein kinase catalytic subunit alpha-2 [Homo
sapiens].
Length = 552
Score = 652 bits (1681), Expect = 0.0
Identities = 318/320 (99%), Positives = 318/320 (99%)
Frame = +3
Query: 84 MAEKQKHDGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGK 263
MAEKQKHDGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGK
Sbjct: 1 MAEKQKHDGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGK 60
Query: 264 IKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLF 443
IKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLF
Sbjct: 61 IKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLF 120
Query: 444 QQILSAVDYCHRHMVVHRDLKPENVLLDAQMNAKIADFGLSNMMSDGEFLRTSCGSPNYA 623
QQILSAVDYCHRHMVVHRDLKPENVLLDA MNAKIADFGLSNMMSDGEFLRTSCGSPNYA
Sbjct: 121 QQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYA 180
Query: 624 APEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRS 803
APEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRS
Sbjct: 181 APEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRS 240
Query: 804 VATLLMHMLQVDPLKRATIKDIREHEWFKQDLPSYLFPEDPSYDANVIDDEAVKEVCEKF 983
VATLLMHMLQVDPLKRATIKDIREHEWFKQDLPSYLFPEDPSYDANVIDDEAVKEVCEKF
Sbjct: 241 VATLLMHMLQVDPLKRATIKDIREHEWFKQDLPSYLFPEDPSYDANVIDDEAVKEVCEKF 300
Query: 984 ECTESEVMNSLYSGDPQDSL 1043
ECTESEVMNSLYSGDPQD L
Sbjct: 301 ECTESEVMNSLYSGDPQDQL 320
>ref|NP_006242.5| 5'-AMP-activated protein kinase catalytic subunit alpha-1 isoform 1
[Homo sapiens].
Length = 559
Score = 580 bits (1495), Expect = e-166
Identities = 277/319 (86%), Positives = 300/319 (94%)
Frame = +3
Query: 87 AEKQKHDGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKI 266
AEKQKHDGRVKIGHY+LGDTLGVGTFGKVK+G+H+LTGHKVAVKILNRQKIRSLDVVGKI
Sbjct: 13 AEKQKHDGRVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKI 72
Query: 267 KREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQ 446
+REIQNLKLFRHPHIIKLYQVISTP+D FMVMEYVSGGELFDYICK+GR++E E+RRLFQ
Sbjct: 73 RREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQ 132
Query: 447 QILSAVDYCHRHMVVHRDLKPENVLLDAQMNAKIADFGLSNMMSDGEFLRTSCGSPNYAA 626
QILS VDYCHRHMVVHRDLKPENVLLDA MNAKIADFGLSNMMSDGEFLRTSCGSPNYAA
Sbjct: 133 QILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAA 192
Query: 627 PEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSV 806
PEVISGRLYAGPEVDIWS GVILYALLCGTLPFDD+HVPTLFKKI G+FY P+YLN SV
Sbjct: 193 PEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQYLNPSV 252
Query: 807 ATLLMHMLQVDPLKRATIKDIREHEWFKQDLPSYLFPEDPSYDANVIDDEAVKEVCEKFE 986
+LL HMLQVDP+KRATIKDIREHEWFKQDLP YLFPEDPSY + +IDDEA+KEVCEKFE
Sbjct: 253 ISLLKHMLQVDPMKRATIKDIREHEWFKQDLPKYLFPEDPSYSSTMIDDEALKEVCEKFE 312
Query: 987 CTESEVMNSLYSGDPQDSL 1043
C+E EV++ LY+ + QD L
Sbjct: 313 CSEEEVLSCLYNRNHQDPL 331
>ref|NP_996790.3| 5'-AMP-activated protein kinase catalytic subunit alpha-1 isoform 2
[Homo sapiens].
Length = 574
Score = 570 bits (1469), Expect = e-163
Identities = 277/334 (82%), Positives = 300/334 (89%), Gaps = 15/334 (4%)
Frame = +3
Query: 87 AEKQKHDGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKI 266
AEKQKHDGRVKIGHY+LGDTLGVGTFGKVK+G+H+LTGHKVAVKILNRQKIRSLDVVGKI
Sbjct: 13 AEKQKHDGRVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKI 72
Query: 267 KREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGR----------- 413
+REIQNLKLFRHPHIIKLYQVISTP+D FMVMEYVSGGELFDYICK+GR
Sbjct: 73 RREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRKSDVPGVVKTG 132
Query: 414 ----VEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAQMNAKIADFGLSNMMSD 581
++E E+RRLFQQILS VDYCHRHMVVHRDLKPENVLLDA MNAKIADFGLSNMMSD
Sbjct: 133 STKELDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD 192
Query: 582 GEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKI 761
GEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWS GVILYALLCGTLPFDD+HVPTLFKKI
Sbjct: 193 GEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKI 252
Query: 762 RGGVFYIPEYLNRSVATLLMHMLQVDPLKRATIKDIREHEWFKQDLPSYLFPEDPSYDAN 941
G+FY P+YLN SV +LL HMLQVDP+KRATIKDIREHEWFKQDLP YLFPEDPSY +
Sbjct: 253 CDGIFYTPQYLNPSVISLLKHMLQVDPMKRATIKDIREHEWFKQDLPKYLFPEDPSYSST 312
Query: 942 VIDDEAVKEVCEKFECTESEVMNSLYSGDPQDSL 1043
+IDDEA+KEVCEKFEC+E EV++ LY+ + QD L
Sbjct: 313 MIDDEALKEVCEKFECSEEEVLSCLYNRNHQDPL 346
>ref|NP_056006.1| serine/threonine-protein kinase SIK2 [Homo sapiens].
Length = 926
Score = 286 bits (732), Expect = 2e-77
Identities = 144/317 (45%), Positives = 205/317 (64%), Gaps = 6/317 (1%)
Frame = +3
Query: 84 MAEKQKH--DGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVV 257
MA+ +H G V++G Y + TLG G F VK+G H++T +VA+KI+++ ++ ++++
Sbjct: 3 MADGPRHLQRGPVRVGFYDIEGTLGKGNFAVVKLGRHRITKTEVAIKIIDKSQLDAVNLE 62
Query: 258 GKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARR 437
KI RE+Q +K+ HPHIIKLYQV+ T + ++V EY GE+FDY+ HGR+ E EARR
Sbjct: 63 -KIYREVQIMKMLDHPHIIKLYQVMETKSMLYLVTEYAKNGEIFDYLANHGRLNESEARR 121
Query: 438 LFQQILSAVDYCHRHMVVHRDLKPENVLLDAQMNAKIADFGLSNMMSDGEFLRTSCGSPN 617
F QILSAVDYCH +VHRDLK EN+LLD MN KIADFG N GE L T CGSP
Sbjct: 122 KFWQILSAVDYCHGRKIVHRDLKAENLLLDNNMNIKIADFGFGNFFKSGELLATWCGSPP 181
Query: 618 YAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLN 797
YAAPEV G+ Y GP++DIWS GV+LY L+CG LPFD +P L +++ G F IP +++
Sbjct: 182 YAAPEVFEGQQYEGPQLDIWSMGVVLYVLVCGALPFDGPTLPILRQRVLEGRFRIPYFMS 241
Query: 798 RSVATLLMHMLQVDPLKRATIKDIREHEWFKQDLP---SYLFPEDPSYDANVID-DEAVK 965
L+ ML +DP KR TI I+EH+W ++P L+P++ + ++ + +E V
Sbjct: 242 EDCEHLIRRMLVLDPSKRLTIAQIKEHKWMLIEVPVQRPVLYPQEQENEPSIGEFNEQVL 301
Query: 966 EVCEKFECTESEVMNSL 1016
+ + + + SL
Sbjct: 302 RLMHSLGIDQQKTIESL 318
>ref|NP_115806.1| BR serine/threonine-protein kinase 1 [Homo sapiens].
Length = 778
Score = 274 bits (701), Expect = 9e-74
Identities = 128/256 (50%), Positives = 184/256 (71%)
Frame = +3
Query: 120 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFR 299
+G Y L TLG G G VK+G H +TG KVA+KI+NR+K+ S V+ K++REI LKL
Sbjct: 31 VGPYRLEKTLGKGQTGLVKLGVHCITGQKVAIKIVNREKL-SESVLMKVEREIAILKLIE 89
Query: 300 HPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHR 479
HPH++KL+ V ++V+E+VSGGELFDY+ K GR+ EAR+ F+QI+SA+D+CH
Sbjct: 90 HPHVLKLHDVYENKKYLYLVLEHVSGGELFDYLVKKGRLTPKEARKFFRQIVSALDFCHS 149
Query: 480 HMVVHRDLKPENVLLDAQMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAG 659
+ + HRDLKPEN+LLD + N +IADFG++++ L TSCGSP+YA PEVI G Y G
Sbjct: 150 YSICHRDLKPENLLLDEKNNIRIADFGMASLQVGDSLLETSCGSPHYACPEVIKGEKYDG 209
Query: 660 PEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVATLLMHMLQVD 839
D+WSCGVIL+ALL G LPFDD+++ L +K++ GVF++P ++ +LL M++V+
Sbjct: 210 RRADMWSCGVILFALLVGALPFDDDNLRQLLEKVKRGVFHMPHFIPPDCQSLLRGMIEVE 269
Query: 840 PLKRATIKDIREHEWF 887
P KR +++ I++H W+
Sbjct: 270 PEKRLSLEQIQKHPWY 285
>ref|NP_775490.2| serine/threonine-protein kinase SIK1 [Homo sapiens].
Length = 783
Score = 273 bits (699), Expect = 1e-73
Identities = 132/276 (47%), Positives = 188/276 (68%)
Frame = +3
Query: 114 VKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKL 293
+++G Y + TLG G F VK+ H++T +VA+KI+++ ++ S ++ KI RE+Q +KL
Sbjct: 22 LRVGFYDIERTLGKGNFAVVKLARHRVTKTQVAIKIIDKTRLDSSNLE-KIYREVQLMKL 80
Query: 294 FRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYC 473
HPHIIKLYQV+ T ++V E+ GE+FDY+ +G + E EAR+ F QILSAV+YC
Sbjct: 81 LNHPHIIKLYQVMETKDMLYIVTEFAKNGEMFDYLTSNGHLSENEARKKFWQILSAVEYC 140
Query: 474 HRHMVVHRDLKPENVLLDAQMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLY 653
H H +VHRDLK EN+LLD M+ K+ADFG N GE L T CGSP YAAPEV G+ Y
Sbjct: 141 HDHHIVHRDLKTENLLLDGNMDIKLADFGFGNFYKSGEPLSTWCGSPPYAAPEVFEGKEY 200
Query: 654 AGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVATLLMHMLQ 833
GP++DIWS GV+LY L+CG+LPFD ++PTL +++ G F IP ++++ +L+ ML
Sbjct: 201 EGPQLDIWSLGVVLYVLVCGSLPFDGPNLPTLRQRVLEGRFRIPFFMSQDCESLIRRMLV 260
Query: 834 VDPLKRATIKDIREHEWFKQDLPSYLFPEDPSYDAN 941
VDP +R TI IR+H W + + P P P++ A+
Sbjct: 261 VDPARRITIAQIRQHRWMRAE-PCLPGPACPAFSAH 295
>ref|NP_003948.2| BR serine/threonine-protein kinase 2 [Homo sapiens].
Length = 668
Score = 272 bits (696), Expect = 3e-73
Identities = 128/256 (50%), Positives = 183/256 (71%)
Frame = +3
Query: 120 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFR 299
+G Y L TLG G G VK+G H +T KVA+KI+NR+K+ S V+ K++REI LKL
Sbjct: 16 VGPYRLEKTLGKGQTGLVKLGVHCVTCQKVAIKIVNREKL-SESVLMKVEREIAILKLIE 74
Query: 300 HPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHR 479
HPH++KL+ V ++V+E+VSGGELFDY+ K GR+ EAR+ F+QI+SA+D+CH
Sbjct: 75 HPHVLKLHDVYENKKYLYLVLEHVSGGELFDYLVKKGRLTPKEARKFFRQIISALDFCHS 134
Query: 480 HMVVHRDLKPENVLLDAQMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAG 659
H + HRDLKPEN+LLD + N +IADFG++++ L TSCGSP+YA PEVI G Y G
Sbjct: 135 HSICHRDLKPENLLLDEKNNIRIADFGMASLQVGDSLLETSCGSPHYACPEVIRGEKYDG 194
Query: 660 PEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVATLLMHMLQVD 839
+ D+WSCGVIL+ALL G LPFDD+++ L +K++ GVF++P ++ +LL M++VD
Sbjct: 195 RKADVWSCGVILFALLVGALPFDDDNLRQLLEKVKRGVFHMPHFIPPDCQSLLRGMIEVD 254
Query: 840 PLKRATIKDIREHEWF 887
+R T++ I++H W+
Sbjct: 255 AARRLTLEHIQKHIWY 270
>ref|NP_079440.2| serine/threonine-protein kinase SIK3 [Homo sapiens].
Length = 1263
Score = 268 bits (686), Expect = 5e-72
Identities = 132/284 (46%), Positives = 191/284 (67%)
Frame = +3
Query: 117 KIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLF 296
+IG+Y + T+G G F VK H +T KVA+KI+++ ++ + + KI RE+Q +K+
Sbjct: 4 RIGYYEIDRTIGKGNFAVVKRATHLVTKAKVAIKIIDKTQLDE-ENLKKIFREVQIMKML 62
Query: 297 RHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCH 476
HPHII+LYQV+ T ++V EY SGGE+FD++ HGR+ E EARR F+QI++AV +CH
Sbjct: 63 CHPHIIRLYQVMETERMIYLVTEYASGGEIFDHLVAHGRMAEKEARRKFKQIVTAVYFCH 122
Query: 477 RHMVVHRDLKPENVLLDAQMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYA 656
+VHRDLK EN+LLDA +N KIADFG SN+ + G+ L+T CGSP YAAPE+ G+ Y
Sbjct: 123 CRNIVHRDLKAENLLLDANLNIKIADFGFSNLFTPGQLLKTWCGSPPYAAPELFEGKEYD 182
Query: 657 GPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVATLLMHMLQV 836
GP+VDIWS GV+LY L+CG LPFD + L ++ G F IP +++ L+ HML +
Sbjct: 183 GPKVDIWSLGVVLYVLVCGALPFDGSTLQNLRARVLSGKFRIPFFMSTECEHLIRHMLVL 242
Query: 837 DPLKRATIKDIREHEWFKQDLPSYLFPEDPSYDANVIDDEAVKE 968
DP KR +++ I +H+W K L DP++D + + + +KE
Sbjct: 243 DPNKRLSMEQICKHKWMK------LGDADPNFDRLIAECQQLKE 280
>ref|NP_061120.3| serine/threonine-protein kinase MARK1 [Homo sapiens].
Length = 795
Score = 267 bits (683), Expect = 1e-71
Identities = 132/287 (45%), Positives = 190/287 (66%), Gaps = 5/287 (1%)
Frame = +3
Query: 105 DGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQN 284
D + IG+Y L T+G G F KVK+ H LTG +VAVKI+++ ++ + K+ RE++
Sbjct: 52 DEQPHIGNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQ-KLFREVRI 110
Query: 285 LKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAV 464
+K+ HP+I+KL++VI T ++VMEY SGGE+FDY+ HGR++E EAR F+QI+SAV
Sbjct: 111 MKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAV 170
Query: 465 DYCHRHMVVHRDLKPENVLLDAQMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISG 644
YCH+ +VHRDLK EN+LLD MN KIADFG SN + G L T CGSP YAAPE+ G
Sbjct: 171 QYCHQKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFCGSPPYAAPELFQG 230
Query: 645 RLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVATLLMH 824
+ Y GPEVD+WS GVILY L+ G+LPFD +++ L +++ G + IP Y++ LL
Sbjct: 231 KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKK 290
Query: 825 MLQVDPLKRATIKDIREHEWF-----KQDLPSYLFPEDPSYDANVID 950
+L ++P+KR +++ I + W +++L Y P+ D ID
Sbjct: 291 LLVLNPIKRGSLEQIMKDRWMNVGHEEEELKPYTEPDPDFNDTKRID 337
>ref|NP_001122392.1| MAP/microtubule affinity-regulating kinase 3 isoform d [Homo
sapiens].
Length = 713
Score = 266 bits (679), Expect = 3e-71
Identities = 134/293 (45%), Positives = 193/293 (65%), Gaps = 5/293 (1%)
Frame = +3
Query: 87 AEKQKHDGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKI 266
A++Q H IG+Y L T+G G F KVK+ H LTG +VA+KI+++ ++ + K+
Sbjct: 47 ADEQPH-----IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQ-KL 100
Query: 267 KREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQ 446
RE++ +K+ HP+I+KL++VI T +++MEY SGGE+FDY+ HGR++E EAR F+
Sbjct: 101 FREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR 160
Query: 447 QILSAVDYCHRHMVVHRDLKPENVLLDAQMNAKIADFGLSNMMSDGEFLRTSCGSPNYAA 626
QI+SAV YCH+ +VHRDLK EN+LLDA MN KIADFG SN + G L T CGSP YAA
Sbjct: 161 QIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFCGSPPYAA 220
Query: 627 PEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSV 806
PE+ G+ Y GPEVD+WS GVILY L+ G+LPFD +++ L +++ G + IP Y++
Sbjct: 221 PELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDC 280
Query: 807 ATLLMHMLQVDPLKRATIKDIREHEWF-----KQDLPSYLFPEDPSYDANVID 950
LL L ++P+KR T++ I + W + +L ++ PE D ID
Sbjct: 281 ENLLKRFLVLNPIKRGTLEQIMKDRWINAGHEEDELKPFVEPELDISDQKRID 333
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 35,852,612
Number of extensions: 878867
Number of successful extensions: 4592
Number of sequences better than 1.0e-05: 823
Number of HSP's gapped: 3160
Number of HSP's successfully gapped: 844
Length of query: 350
Length of database: 18,297,164
Length adjustment: 103
Effective length of query: 247
Effective length of database: 14,901,872
Effective search space: 3680762384
Effective search space used: 3680762384
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002888
(1051 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_835279.2| 5'-AMP-activated protein kinase catalytic subun... 651 0.0
Alignment gi|NP_001013385.3| 5'-AMP-activated protein kinase catalytic su... 578 e-165
Alignment gi|NP_848825.2| serine/threonine-protein kinase SIK2 [Mus muscu... 285 5e-77
Alignment gi|NP_034961.2| serine/threonine-protein kinase SIK1 [Mus muscu... 280 2e-75
Alignment gi|NP_001162044.1| BR serine/threonine-protein kinase 1 isoform... 275 6e-74
Alignment gi|NP_001003920.2| BR serine/threonine-protein kinase 1 isoform... 275 6e-74
Alignment gi|NP_001009930.1| BR serine/threonine-protein kinase 2 isoform... 272 4e-73
Alignment gi|NP_001009929.1| BR serine/threonine-protein kinase 2 isoform... 272 4e-73
Alignment gi|NP_083702.1| BR serine/threonine-protein kinase 2 isoform al... 272 4e-73
Alignment gi|NP_663490.2| serine/threonine-protein kinase MARK1 [Mus musc... 270 1e-72
>ref|NP_835279.2| 5'-AMP-activated protein kinase catalytic subunit alpha-2 [Mus
musculus].
Length = 552
Score = 651 bits (1679), Expect = 0.0
Identities = 317/320 (99%), Positives = 319/320 (99%)
Frame = +3
Query: 84 MAEKQKHDGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGK 263
MAEKQKHDGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGK
Sbjct: 1 MAEKQKHDGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGK 60
Query: 264 IKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLF 443
IKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEE+EARRLF
Sbjct: 61 IKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEVEARRLF 120
Query: 444 QQILSAVDYCHRHMVVHRDLKPENVLLDAQMNAKIADFGLSNMMSDGEFLRTSCGSPNYA 623
QQILSAVDYCHRHMVVHRDLKPENVLLDAQMNAKIADFGLSNMMSDGEFLRTSCGSPNYA
Sbjct: 121 QQILSAVDYCHRHMVVHRDLKPENVLLDAQMNAKIADFGLSNMMSDGEFLRTSCGSPNYA 180
Query: 624 APEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRS 803
APEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIP+YLNRS
Sbjct: 181 APEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPDYLNRS 240
Query: 804 VATLLMHMLQVDPLKRATIKDIREHEWFKQDLPSYLFPEDPSYDANVIDDEAVKEVCEKF 983
VATLLMHMLQVDPLKRATIKDIREHEWFKQDLPSYLFPEDPSYDANVIDDEAVKEVCEKF
Sbjct: 241 VATLLMHMLQVDPLKRATIKDIREHEWFKQDLPSYLFPEDPSYDANVIDDEAVKEVCEKF 300
Query: 984 ECTESEVMNSLYSGDPQDSL 1043
ECTESEVMNSLYSGDPQD L
Sbjct: 301 ECTESEVMNSLYSGDPQDQL 320
>ref|NP_001013385.3| 5'-AMP-activated protein kinase catalytic subunit alpha-1 [Mus
musculus].
Length = 559
Score = 578 bits (1490), Expect = e-165
Identities = 276/319 (86%), Positives = 299/319 (93%)
Frame = +3
Query: 87 AEKQKHDGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKI 266
AEKQKHDGRVKIGHY+LGDTLGVGTFGKVK+G+H+LTGHKVAVKILNRQKIRSLDVVGKI
Sbjct: 13 AEKQKHDGRVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKI 72
Query: 267 KREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQ 446
+REIQNLKLFRHPHIIKLYQVISTP+D FMVMEYVSGGELFDYICK+GR++E E+RRLFQ
Sbjct: 73 RREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQ 132
Query: 447 QILSAVDYCHRHMVVHRDLKPENVLLDAQMNAKIADFGLSNMMSDGEFLRTSCGSPNYAA 626
QILS VDYCHRHMVVHRDLKPENVLLDA MNAKIADFGLSNMMSDGEFLRTSCGSPNYAA
Sbjct: 133 QILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAA 192
Query: 627 PEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSV 806
PEVISGRLYAGPEVDIWS GVILYALLCGTLPFDD+HVPTLFKKI G+FY P+YLN SV
Sbjct: 193 PEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQYLNPSV 252
Query: 807 ATLLMHMLQVDPLKRATIKDIREHEWFKQDLPSYLFPEDPSYDANVIDDEAVKEVCEKFE 986
+LL HMLQVDP+KRA IKDIREHEWFKQDLP YLFPEDPSY + +IDDEA+KEVCEKFE
Sbjct: 253 ISLLKHMLQVDPMKRAAIKDIREHEWFKQDLPKYLFPEDPSYSSTMIDDEALKEVCEKFE 312
Query: 987 CTESEVMNSLYSGDPQDSL 1043
C+E EV++ LY+ + QD L
Sbjct: 313 CSEEEVLSCLYNRNHQDPL 331
>ref|NP_848825.2| serine/threonine-protein kinase SIK2 [Mus musculus].
Length = 931
Score = 285 bits (728), Expect = 5e-77
Identities = 144/317 (45%), Positives = 205/317 (64%), Gaps = 6/317 (1%)
Frame = +3
Query: 84 MAEKQKH--DGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVV 257
MA+ +H G V++G Y + TLG G F VK+G H++T +VA+KI+++ ++ ++++
Sbjct: 3 MADGPRHLQRGPVRVGFYDIEGTLGKGNFAVVKLGRHRITKTEVAIKIIDKSQLDAVNLE 62
Query: 258 GKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARR 437
KI RE+Q +K+ HPHIIKLYQV+ T + ++V EY GE+FDY+ HGR+ E EARR
Sbjct: 63 -KIYREVQIMKMLDHPHIIKLYQVMETKSMLYLVTEYAKNGEIFDYLANHGRLNESEARR 121
Query: 438 LFQQILSAVDYCHRHMVVHRDLKPENVLLDAQMNAKIADFGLSNMMSDGEFLRTSCGSPN 617
F QILSAVDYCH VVHRDLK EN+LLD MN KIADFG N GE L T CGSP
Sbjct: 122 KFWQILSAVDYCHGRKVVHRDLKAENLLLDNNMNIKIADFGFGNFFKTGELLATWCGSPP 181
Query: 618 YAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLN 797
YAAPEV G+ Y GP++DIWS GV+LY L+CG LPFD +P L +++ G F IP +++
Sbjct: 182 YAAPEVFEGQQYEGPQLDIWSMGVVLYVLVCGALPFDGPTLPILRQRVLEGRFRIPYFMS 241
Query: 798 RSVATLLMHMLQVDPLKRATIKDIREHEWFKQDLP---SYLFPEDPSYDANVID-DEAVK 965
L+ ML +DP KR +I I+EH+W ++P L+P++ + ++ + +E V
Sbjct: 242 EDCEHLIRRMLVLDPSKRLSIAQIKEHKWMLIEVPVQRPILYPQEQENEPSIGEFNEQVL 301
Query: 966 EVCEKFECTESEVMNSL 1016
+ + + + SL
Sbjct: 302 RLMHSLGIDQQKTVESL 318
>ref|NP_034961.2| serine/threonine-protein kinase SIK1 [Mus musculus].
Length = 779
Score = 280 bits (715), Expect = 2e-75
Identities = 134/274 (48%), Positives = 191/274 (69%)
Frame = +3
Query: 114 VKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKL 293
+++G Y + TLG G F VK+ H++T +VA+KI+++ ++ S ++ KI RE+Q +KL
Sbjct: 22 LRVGFYDVERTLGKGNFAVVKLARHRVTKTQVAIKIIDKTRLDSSNLE-KIYREVQLMKL 80
Query: 294 FRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYC 473
HP+IIKLYQV+ T ++V E+ GE+FDY+ +G + E EAR+ F QILSAV+YC
Sbjct: 81 LNHPNIIKLYQVMETKDMLYIVTEFAKNGEMFDYLTSNGHLSENEARQKFWQILSAVEYC 140
Query: 474 HRHMVVHRDLKPENVLLDAQMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLY 653
H H +VHRDLK EN+LLD+ M+ K+ADFG N GE L T CGSP YAAPEV G+ Y
Sbjct: 141 HNHHIVHRDLKTENLLLDSNMDIKLADFGFGNFYKPGEPLSTWCGSPPYAAPEVFEGKEY 200
Query: 654 AGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVATLLMHMLQ 833
GP++D+WS GV+LY L+CG+LPFD ++PTL +++ G F IP ++++ TL+ ML
Sbjct: 201 EGPQLDVWSLGVVLYVLVCGSLPFDGPNLPTLRQRVLEGRFRIPFFMSQDCETLIRRMLV 260
Query: 834 VDPLKRATIKDIREHEWFKQDLPSYLFPEDPSYD 935
VDP KR TI IR+H W + D P+ L +DP++D
Sbjct: 261 VDPAKRITIAQIRQHRWMQAD-PTLLQQDDPAFD 293
>ref|NP_001162044.1| BR serine/threonine-protein kinase 1 isoform 2 [Mus musculus].
Length = 343
Score = 275 bits (702), Expect = 6e-74
Identities = 129/256 (50%), Positives = 184/256 (71%)
Frame = +3
Query: 120 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFR 299
+G Y L TLG G G VK+G H +TG KVAVKI+NR+K+ S V+ K++REI LKL
Sbjct: 31 VGPYRLEKTLGKGQTGLVKLGVHCITGQKVAVKIVNREKL-SESVLMKVEREIAILKLIE 89
Query: 300 HPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHR 479
HPH++KL+ V ++V+E+VSGGELFDY+ K GR+ EAR+ F+QI+SA+D+CH
Sbjct: 90 HPHVLKLHDVYENKKYLYLVLEHVSGGELFDYLVKKGRLTPKEARKFFRQIVSALDFCHS 149
Query: 480 HMVVHRDLKPENVLLDAQMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAG 659
+ + HRDLKPEN+LLD + N +IADFG++++ L TSCGSP+YA PEVI G Y G
Sbjct: 150 YSICHRDLKPENLLLDEKNNIRIADFGMASLQVGDSLLETSCGSPHYACPEVIKGEKYDG 209
Query: 660 PEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVATLLMHMLQVD 839
D+WSCGVIL+ALL G LPFDD+++ L +K++ GVF++P ++ +LL M++V+
Sbjct: 210 RRADMWSCGVILFALLVGALPFDDDNLRQLLEKVKRGVFHMPHFIPPDCQSLLRGMIEVE 269
Query: 840 PLKRATIKDIREHEWF 887
P KR +++ I++H W+
Sbjct: 270 PEKRLSLEQIQKHPWY 285
>ref|NP_001003920.2| BR serine/threonine-protein kinase 1 isoform 1 [Mus musculus].
Length = 778
Score = 275 bits (702), Expect = 6e-74
Identities = 129/256 (50%), Positives = 184/256 (71%)
Frame = +3
Query: 120 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFR 299
+G Y L TLG G G VK+G H +TG KVAVKI+NR+K+ S V+ K++REI LKL
Sbjct: 31 VGPYRLEKTLGKGQTGLVKLGVHCITGQKVAVKIVNREKL-SESVLMKVEREIAILKLIE 89
Query: 300 HPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHR 479
HPH++KL+ V ++V+E+VSGGELFDY+ K GR+ EAR+ F+QI+SA+D+CH
Sbjct: 90 HPHVLKLHDVYENKKYLYLVLEHVSGGELFDYLVKKGRLTPKEARKFFRQIVSALDFCHS 149
Query: 480 HMVVHRDLKPENVLLDAQMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAG 659
+ + HRDLKPEN+LLD + N +IADFG++++ L TSCGSP+YA PEVI G Y G
Sbjct: 150 YSICHRDLKPENLLLDEKNNIRIADFGMASLQVGDSLLETSCGSPHYACPEVIKGEKYDG 209
Query: 660 PEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVATLLMHMLQVD 839
D+WSCGVIL+ALL G LPFDD+++ L +K++ GVF++P ++ +LL M++V+
Sbjct: 210 RRADMWSCGVILFALLVGALPFDDDNLRQLLEKVKRGVFHMPHFIPPDCQSLLRGMIEVE 269
Query: 840 PLKRATIKDIREHEWF 887
P KR +++ I++H W+
Sbjct: 270 PEKRLSLEQIQKHPWY 285
>ref|NP_001009930.1| BR serine/threonine-protein kinase 2 isoform gamma [Mus musculus].
Length = 719
Score = 272 bits (695), Expect = 4e-73
Identities = 128/256 (50%), Positives = 183/256 (71%)
Frame = +3
Query: 120 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFR 299
+G Y L TLG G G VK+G H +T KVA+KI+NR+K+ S V+ K++REI LKL
Sbjct: 17 VGPYRLEKTLGKGQTGLVKLGIHCVTCQKVAIKIVNREKL-SESVLMKVEREIAILKLIE 75
Query: 300 HPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHR 479
HPH++KL+ V ++V+E+VSGGELFDY+ K GR+ EAR+ F+QI+SA+D+CH
Sbjct: 76 HPHVLKLHDVYENKKYLYLVLEHVSGGELFDYLVKKGRLTPKEARKFFRQIISALDFCHS 135
Query: 480 HMVVHRDLKPENVLLDAQMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAG 659
H + HRDLKPEN+LLD + N +IADFG++++ L TSCGSP+YA PEVI G Y G
Sbjct: 136 HSICHRDLKPENLLLDERNNIRIADFGMASLQVGDSLLETSCGSPHYACPEVIRGEKYDG 195
Query: 660 PEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVATLLMHMLQVD 839
+ D+WSCGVIL+ALL G LPFDD+++ L +K++ GVF++P ++ +LL M++VD
Sbjct: 196 RKADVWSCGVILFALLVGALPFDDDNLRQLLEKVKRGVFHMPHFIPPDCQSLLRGMIEVD 255
Query: 840 PLKRATIKDIREHEWF 887
+R T++ I++H W+
Sbjct: 256 AARRLTLEHIQKHIWY 271
>ref|NP_001009929.1| BR serine/threonine-protein kinase 2 isoform beta [Mus musculus].
Length = 675
Score = 272 bits (695), Expect = 4e-73
Identities = 128/256 (50%), Positives = 183/256 (71%)
Frame = +3
Query: 120 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFR 299
+G Y L TLG G G VK+G H +T KVA+KI+NR+K+ S V+ K++REI LKL
Sbjct: 17 VGPYRLEKTLGKGQTGLVKLGIHCVTCQKVAIKIVNREKL-SESVLMKVEREIAILKLIE 75
Query: 300 HPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHR 479
HPH++KL+ V ++V+E+VSGGELFDY+ K GR+ EAR+ F+QI+SA+D+CH
Sbjct: 76 HPHVLKLHDVYENKKYLYLVLEHVSGGELFDYLVKKGRLTPKEARKFFRQIISALDFCHS 135
Query: 480 HMVVHRDLKPENVLLDAQMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAG 659
H + HRDLKPEN+LLD + N +IADFG++++ L TSCGSP+YA PEVI G Y G
Sbjct: 136 HSICHRDLKPENLLLDERNNIRIADFGMASLQVGDSLLETSCGSPHYACPEVIRGEKYDG 195
Query: 660 PEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVATLLMHMLQVD 839
+ D+WSCGVIL+ALL G LPFDD+++ L +K++ GVF++P ++ +LL M++VD
Sbjct: 196 RKADVWSCGVILFALLVGALPFDDDNLRQLLEKVKRGVFHMPHFIPPDCQSLLRGMIEVD 255
Query: 840 PLKRATIKDIREHEWF 887
+R T++ I++H W+
Sbjct: 256 AARRLTLEHIQKHIWY 271
>ref|NP_083702.1| BR serine/threonine-protein kinase 2 isoform alpha [Mus musculus].
Length = 653
Score = 272 bits (695), Expect = 4e-73
Identities = 128/256 (50%), Positives = 183/256 (71%)
Frame = +3
Query: 120 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFR 299
+G Y L TLG G G VK+G H +T KVA+KI+NR+K+ S V+ K++REI LKL
Sbjct: 17 VGPYRLEKTLGKGQTGLVKLGIHCVTCQKVAIKIVNREKL-SESVLMKVEREIAILKLIE 75
Query: 300 HPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHR 479
HPH++KL+ V ++V+E+VSGGELFDY+ K GR+ EAR+ F+QI+SA+D+CH
Sbjct: 76 HPHVLKLHDVYENKKYLYLVLEHVSGGELFDYLVKKGRLTPKEARKFFRQIISALDFCHS 135
Query: 480 HMVVHRDLKPENVLLDAQMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAG 659
H + HRDLKPEN+LLD + N +IADFG++++ L TSCGSP+YA PEVI G Y G
Sbjct: 136 HSICHRDLKPENLLLDERNNIRIADFGMASLQVGDSLLETSCGSPHYACPEVIRGEKYDG 195
Query: 660 PEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVATLLMHMLQVD 839
+ D+WSCGVIL+ALL G LPFDD+++ L +K++ GVF++P ++ +LL M++VD
Sbjct: 196 RKADVWSCGVILFALLVGALPFDDDNLRQLLEKVKRGVFHMPHFIPPDCQSLLRGMIEVD 255
Query: 840 PLKRATIKDIREHEWF 887
+R T++ I++H W+
Sbjct: 256 AARRLTLEHIQKHIWY 271
>ref|NP_663490.2| serine/threonine-protein kinase MARK1 [Mus musculus].
Length = 795
Score = 270 bits (690), Expect = 1e-72
Identities = 135/287 (47%), Positives = 192/287 (66%), Gaps = 5/287 (1%)
Frame = +3
Query: 105 DGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQN 284
D + IG+Y L T+G G F KVK+ H LTG +VAVKI+++ ++ + K+ RE++
Sbjct: 52 DEQPHIGNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQ-KLFREVRI 110
Query: 285 LKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAV 464
+K+ HP+I+KL++VI T ++VMEY SGGE+FDY+ HGR++E EAR F+QI+SAV
Sbjct: 111 MKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAV 170
Query: 465 DYCHRHMVVHRDLKPENVLLDAQMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISG 644
YCH+ +VHRDLK EN+LLDA MN KIADFG SN + G L T CGSP YAAPE+ G
Sbjct: 171 QYCHQKCIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGNKLDTFCGSPPYAAPELFQG 230
Query: 645 RLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVATLLMH 824
+ Y GPEVD+WS GVILY L+ G+LPFD +++ L +++ G + IP Y++ LL
Sbjct: 231 KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKK 290
Query: 825 MLQVDPLKRATIKDIREHEWF-----KQDLPSYLFPEDPSYDANVID 950
+L ++P+KR +++ I + W +++L Y PE DA ID
Sbjct: 291 LLVLNPIKRGSLEQIMKDRWMNVGHEEEELKPYSEPELDLSDAKRID 337
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 30,799,001
Number of extensions: 761219
Number of successful extensions: 3825
Number of sequences better than 1.0e-05: 684
Number of HSP's gapped: 2717
Number of HSP's successfully gapped: 698
Length of query: 350
Length of database: 15,617,559
Length adjustment: 102
Effective length of query: 248
Effective length of database: 12,553,887
Effective search space: 3113363976
Effective search space used: 3113363976
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002888
(1051 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_999431.1| 5'-AMP-activated protein kinase catalytic subun... 654 0.0
Alignment gi|NP_001161105.1| 5'-AMP-activated protein kinase catalytic su... 580 e-166
Alignment gi|XP_003362272.1| PREDICTED: 5'-AMP-activated protein kinase c... 508 e-144
Alignment gi|XP_003361161.1| PREDICTED: serine/threonine-protein kinase M... 272 3e-73
Alignment gi|XP_003130566.2| PREDICTED: serine/threonine-protein kinase M... 260 1e-69
Alignment gi|XP_003359033.1| PREDICTED: serine/threonine-protein kinase S... 245 3e-65
Alignment gi|XP_003357439.1| PREDICTED: NUAK family SNF1-like kinase 2 [S... 237 9e-63
Alignment gi|XP_003132192.1| PREDICTED: SNF-related serine/threonine-prot... 221 4e-58
Alignment gi|XP_003132191.1| PREDICTED: SNF-related serine/threonine-prot... 221 4e-58
Alignment gi|XP_003126141.2| PREDICTED: NUAK family SNF1-like kinase 1-li... 216 2e-56
>ref|NP_999431.1| 5'-AMP-activated protein kinase catalytic subunit alpha-2 [Sus
scrofa].
Length = 552
Score = 654 bits (1686), Expect = 0.0
Identities = 319/320 (99%), Positives = 319/320 (99%)
Frame = +3
Query: 84 MAEKQKHDGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGK 263
MAEKQKHDGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGK
Sbjct: 1 MAEKQKHDGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGK 60
Query: 264 IKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLF 443
IKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLF
Sbjct: 61 IKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLF 120
Query: 444 QQILSAVDYCHRHMVVHRDLKPENVLLDAQMNAKIADFGLSNMMSDGEFLRTSCGSPNYA 623
QQILSAVDYCHRHMVVHRDLKPENVLLDAQMNAKIADFGLSNMMSDGEFLRTSCGSPNYA
Sbjct: 121 QQILSAVDYCHRHMVVHRDLKPENVLLDAQMNAKIADFGLSNMMSDGEFLRTSCGSPNYA 180
Query: 624 APEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRS 803
APEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRS
Sbjct: 181 APEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRS 240
Query: 804 VATLLMHMLQVDPLKRATIKDIREHEWFKQDLPSYLFPEDPSYDANVIDDEAVKEVCEKF 983
VATLLMHMLQVDPLKRATIKDIREHEWFKQDLPSYLFPEDPSYDANVIDDEAVKEVCEKF
Sbjct: 241 VATLLMHMLQVDPLKRATIKDIREHEWFKQDLPSYLFPEDPSYDANVIDDEAVKEVCEKF 300
Query: 984 ECTESEVMNSLYSGDPQDSL 1043
ECTESEVMNSLYSGDPQD L
Sbjct: 301 ECTESEVMNSLYSGDPQDQL 320
>ref|NP_001161105.1| 5'-AMP-activated protein kinase catalytic subunit alpha-1 [Sus
scrofa].
Length = 550
Score = 580 bits (1495), Expect = e-166
Identities = 277/319 (86%), Positives = 300/319 (94%)
Frame = +3
Query: 87 AEKQKHDGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKI 266
AEKQKHDGRVKIGHY+LGDTLGVGTFGKVK+G+H+LTGHKVAVKILNRQKIRSLDVVGKI
Sbjct: 4 AEKQKHDGRVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKI 63
Query: 267 KREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQ 446
+REIQNLKLFRHPHIIKLYQVISTP+D FMVMEYVSGGELFDYICK+GR++E E+RRLFQ
Sbjct: 64 RREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQ 123
Query: 447 QILSAVDYCHRHMVVHRDLKPENVLLDAQMNAKIADFGLSNMMSDGEFLRTSCGSPNYAA 626
QILS VDYCHRHMVVHRDLKPENVLLDA MNAKIADFGLSNMMSDGEFLRTSCGSPNYAA
Sbjct: 124 QILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAA 183
Query: 627 PEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSV 806
PEVISGRLYAGPEVDIWS GVILYALLCGTLPFDD+HVPTLFKKI G+FY P+YLN SV
Sbjct: 184 PEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQYLNPSV 243
Query: 807 ATLLMHMLQVDPLKRATIKDIREHEWFKQDLPSYLFPEDPSYDANVIDDEAVKEVCEKFE 986
+LL HMLQVDP+KRATIKDIREHEWFKQDLP YLFPEDPSY + +IDDEA+KEVCEKFE
Sbjct: 244 ISLLKHMLQVDPMKRATIKDIREHEWFKQDLPKYLFPEDPSYSSTMIDDEALKEVCEKFE 303
Query: 987 CTESEVMNSLYSGDPQDSL 1043
C+E EV++ LY+ + QD L
Sbjct: 304 CSEEEVLSCLYNRNHQDPL 322
>ref|XP_003362272.1| PREDICTED: 5'-AMP-activated protein kinase catalytic subunit
alpha-1-like, partial [Sus scrofa].
Length = 531
Score = 508 bits (1308), Expect = e-144
Identities = 248/303 (81%), Positives = 269/303 (88%), Gaps = 15/303 (4%)
Frame = +3
Query: 180 GEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV 359
G+H+LTGHKVAVKILNRQKIRSLDVVGKI+REIQNLKLFRHPHIIKLYQVISTP+D FMV
Sbjct: 1 GKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMV 60
Query: 360 MEYVSGGELFDYICKHGR---------------VEEMEARRLFQQILSAVDYCHRHMVVH 494
MEYVSGGELFDYICK+GR ++E E+RRLFQQILS VDYCHRHMVVH
Sbjct: 61 MEYVSGGELFDYICKNGRKSGVPGIVRTGSVKELDEKESRRLFQQILSGVDYCHRHMVVH 120
Query: 495 RDLKPENVLLDAQMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDI 674
RDLKPENVLLDA MNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDI
Sbjct: 121 RDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDI 180
Query: 675 WSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVATLLMHMLQVDPLKRA 854
WS GVILYALLCGTLPFDD+HVPTLFKKI G+FY P+YLN SV +LL HMLQVDP+KRA
Sbjct: 181 WSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQYLNPSVISLLKHMLQVDPMKRA 240
Query: 855 TIKDIREHEWFKQDLPSYLFPEDPSYDANVIDDEAVKEVCEKFECTESEVMNSLYSGDPQ 1034
TIKDIREHEWFKQDLP YLFPEDPSY + +IDDEA+KEVCEKFEC+E EV++ LY+ + Q
Sbjct: 241 TIKDIREHEWFKQDLPKYLFPEDPSYSSTMIDDEALKEVCEKFECSEEEVLSCLYNRNHQ 300
Query: 1035 DSL 1043
D L
Sbjct: 301 DPL 303
>ref|XP_003361161.1| PREDICTED: serine/threonine-protein kinase MARK1-like [Sus scrofa].
Length = 912
Score = 272 bits (695), Expect = 3e-73
Identities = 137/293 (46%), Positives = 195/293 (66%), Gaps = 5/293 (1%)
Frame = +3
Query: 87 AEKQKHDGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKI 266
A++Q H IG+Y L T+G G F KVK+ H LTG +VAVKI+++ ++ + K+
Sbjct: 115 ADEQPH-----IGNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQ-KL 168
Query: 267 KREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQ 446
RE++ +K+ HP+I+KL++VI T ++VMEY SGGE+FDY+ HGR++E EAR F+
Sbjct: 169 FREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR 228
Query: 447 QILSAVDYCHRHMVVHRDLKPENVLLDAQMNAKIADFGLSNMMSDGEFLRTSCGSPNYAA 626
QI+SAV YCH+ +VHRDLK EN+LLDA MN KIADFG SN + G L T CGSP YAA
Sbjct: 229 QIVSAVQYCHQKCIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGNKLDTFCGSPPYAA 288
Query: 627 PEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSV 806
PE+ G+ Y GPEVD+WS GVILY L+ G+LPFD +++ L +++ G + IP Y++
Sbjct: 289 PELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDC 348
Query: 807 ATLLMHMLQVDPLKRATIKDIREHEWF-----KQDLPSYLFPEDPSYDANVID 950
LL +L ++P+KR +++ I + W +++L Y PE DA ID
Sbjct: 349 ENLLKKLLVLNPIKRGSLEQIMKDRWMNVGHEEEELKPYAEPEPDFNDAKRID 401
>ref|XP_003130566.2| PREDICTED: serine/threonine-protein kinase MARK1-like [Sus scrofa].
Length = 436
Score = 260 bits (664), Expect = 1e-69
Identities = 127/259 (49%), Positives = 181/259 (69%)
Frame = +3
Query: 87 AEKQKHDGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKI 266
A++Q H IG+Y L T+G G F KVK+ H LTG +VAVKI+++ ++ + K+
Sbjct: 63 ADEQPH-----IGNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQ-KL 116
Query: 267 KREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQ 446
RE++ +K+ HP+I+KL++VI T ++VMEY SGGE+FDY+ HGR++E EAR F+
Sbjct: 117 FREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR 176
Query: 447 QILSAVDYCHRHMVVHRDLKPENVLLDAQMNAKIADFGLSNMMSDGEFLRTSCGSPNYAA 626
QI+SAV YCH+ +VHRDLK EN+LLDA MN KIADFG SN + G L T CGSP YAA
Sbjct: 177 QIVSAVQYCHQKCIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGNKLDTFCGSPPYAA 236
Query: 627 PEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSV 806
PE+ G+ Y GPEVD+WS GVILY L+ G+LPFD +++ L +++ G + IP Y++
Sbjct: 237 PELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDC 296
Query: 807 ATLLMHMLQVDPLKRATIK 863
LL +L ++P+KR +++
Sbjct: 297 ENLLKKLLVLNPIKRGSLE 315
>ref|XP_003359033.1| PREDICTED: serine/threonine-protein kinase SIK1-like [Sus scrofa].
Length = 425
Score = 245 bits (625), Expect = 3e-65
Identities = 118/246 (47%), Positives = 164/246 (66%)
Frame = +3
Query: 63 ARLRAPNMAEKQKHDGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIR 242
+ L A Q +++G Y + TLG G F VK+ H++T +VA+KI+++ ++
Sbjct: 5 SELSAAPAGSGQGQQKPLRVGFYDIERTLGKGNFAVVKLARHRVTKTQVAIKIIDKTRLD 64
Query: 243 SLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEE 422
S ++ KI RE+Q +KL HPHI+KLYQV+ T ++V E+ GE+FDY+ HG + E
Sbjct: 65 SSNLE-KIYREVQIMKLLNHPHIVKLYQVMETKDMLYIVTEFAKNGEMFDYLTSHGHLSE 123
Query: 423 MEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAQMNAKIADFGLSNMMSDGEFLRTS 602
EAR+ F QILSAV+YCH H +VHRDLK EN+LLD M+ K+ADFG N GE L T
Sbjct: 124 SEARKKFWQILSAVEYCHSHHIVHRDLKTENLLLDGNMDIKLADFGFGNFYKSGEPLSTW 183
Query: 603 CGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYI 782
CGSP YAAPEV G+ Y GP++DIWS GV+LY L+CG+LPFD +P L +++ G F I
Sbjct: 184 CGSPPYAAPEVFEGKEYEGPQLDIWSLGVVLYVLVCGSLPFDGPSLPALRQRVLEGRFRI 243
Query: 783 PEYLNR 800
P +++R
Sbjct: 244 PFFMSR 249
>ref|XP_003357439.1| PREDICTED: NUAK family SNF1-like kinase 2 [Sus scrofa].
Length = 632
Score = 237 bits (604), Expect = 9e-63
Identities = 120/264 (45%), Positives = 173/264 (65%), Gaps = 1/264 (0%)
Frame = +3
Query: 96 QKHDGRVKIGH-YVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKR 272
++H + + H Y +TLG GT+GKVK +G VA+K + + +I+ + I+R
Sbjct: 46 KRHHHKHNLRHRYEFLETLGKGTYGKVKKARES-SGRLVAIKSIRKDRIKDEQDLMHIRR 104
Query: 273 EIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQI 452
EI+ + HPHII +++V + +VMEY S G+L+DYI + R+ E EAR F+QI
Sbjct: 105 EIEIMSSLNHPHIIAIHEVFENSSKIVIVMEYASRGDLYDYIIERQRLSEREARHFFRQI 164
Query: 453 LSAVDYCHRHMVVHRDLKPENVLLDAQMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPE 632
+SAV YCH++ VVHRDLK EN+LLDA N KIADFGLSN+ G+FL+T CGSP YA+PE
Sbjct: 165 VSAVHYCHQNGVVHRDLKLENILLDANGNIKIADFGLSNLYHQGKFLQTFCGSPLYASPE 224
Query: 633 VISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVAT 812
+++G+ Y GPEVD WS GV+LY L+ G++PFD + TL K+I G + P +
Sbjct: 225 IVNGKPYMGPEVDSWSLGVLLYILVHGSMPFDGQDHKTLVKQISNGAYRQPPKPS-DACG 283
Query: 813 LLMHMLQVDPLKRATIKDIREHEW 884
L+ +L V+P +RAT++D+ H W
Sbjct: 284 LIRWLLMVNPTRRATLEDVASHWW 307
>ref|XP_003132192.1| PREDICTED: SNF-related serine/threonine-protein kinase isoform 2
[Sus scrofa].
Length = 767
Score = 221 bits (564), Expect = 4e-58
Identities = 113/266 (42%), Positives = 169/266 (63%), Gaps = 2/266 (0%)
Frame = +3
Query: 93 KQKHDGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKR 272
K+ +DG++ G Y L TLG G F VK+ H TG KVAVK++++ K+ +L G + +
Sbjct: 5 KRGYDGKIA-GLYDLDKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTL-ATGHLFQ 62
Query: 273 EIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGR-VEEMEARRLFQQ 449
E++ +KL +HP+I++LY+VI T T ++++E GG++FDYI KH + E A++ F Q
Sbjct: 63 EVRCMKLVQHPNIVRLYEVIDTQTKLYLILELGDGGDMFDYIMKHEEGLNEDLAKKYFAQ 122
Query: 450 ILSAVDYCHRHMVVHRDLKPENVLL-DAQMNAKIADFGLSNMMSDGEFLRTSCGSPNYAA 626
I+ A+ YCH+ VVHRDLKPENV+ + Q K+ DFG SN G+ L TSCGS Y+A
Sbjct: 123 IVHAISYCHKLHVVHRDLKPENVVFFEKQGLVKLTDFGFSNKFQPGKKLTTSCGSLAYSA 182
Query: 627 PEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSV 806
PE++ G Y P VDIWS GVIL+ L+CG PF + + I + +P ++++
Sbjct: 183 PEILLGDEYDAPAVDIWSLGVILFMLVCGQPPFQEANDSETLTMIMDCKYTVPSHVSKEC 242
Query: 807 ATLLMHMLQVDPLKRATIKDIREHEW 884
L+ MLQ DP +RA++++I H W
Sbjct: 243 KDLITRMLQRDPKRRASLEEIENHPW 268
>ref|XP_003132191.1| PREDICTED: SNF-related serine/threonine-protein kinase isoform 1
[Sus scrofa].
Length = 767
Score = 221 bits (564), Expect = 4e-58
Identities = 113/266 (42%), Positives = 169/266 (63%), Gaps = 2/266 (0%)
Frame = +3
Query: 93 KQKHDGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKR 272
K+ +DG++ G Y L TLG G F VK+ H TG KVAVK++++ K+ +L G + +
Sbjct: 5 KRGYDGKIA-GLYDLDKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTL-ATGHLFQ 62
Query: 273 EIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGR-VEEMEARRLFQQ 449
E++ +KL +HP+I++LY+VI T T ++++E GG++FDYI KH + E A++ F Q
Sbjct: 63 EVRCMKLVQHPNIVRLYEVIDTQTKLYLILELGDGGDMFDYIMKHEEGLNEDLAKKYFAQ 122
Query: 450 ILSAVDYCHRHMVVHRDLKPENVLL-DAQMNAKIADFGLSNMMSDGEFLRTSCGSPNYAA 626
I+ A+ YCH+ VVHRDLKPENV+ + Q K+ DFG SN G+ L TSCGS Y+A
Sbjct: 123 IVHAISYCHKLHVVHRDLKPENVVFFEKQGLVKLTDFGFSNKFQPGKKLTTSCGSLAYSA 182
Query: 627 PEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSV 806
PE++ G Y P VDIWS GVIL+ L+CG PF + + I + +P ++++
Sbjct: 183 PEILLGDEYDAPAVDIWSLGVILFMLVCGQPPFQEANDSETLTMIMDCKYTVPSHVSKEC 242
Query: 807 ATLLMHMLQVDPLKRATIKDIREHEW 884
L+ MLQ DP +RA++++I H W
Sbjct: 243 KDLITRMLQRDPKRRASLEEIENHPW 268
>ref|XP_003126141.2| PREDICTED: NUAK family SNF1-like kinase 1-like [Sus scrofa].
Length = 754
Score = 216 bits (550), Expect = 2e-56
Identities = 108/226 (47%), Positives = 147/226 (65%)
Frame = +3
Query: 207 VAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGEL 386
VA+K + + KI+ + I+REI+ + HPHII +Y+V ++MEY S GEL
Sbjct: 174 VAIKSIRKDKIKDEQDMVHIRREIEIMSSLSHPHIISIYEVFENKDKIVIIMEYASKGEL 233
Query: 387 FDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAQMNAKIADFGLS 566
+DYI + R+ E E R F+QI+SAV YCH++ VVHRDLK EN+LLD N KIADFGLS
Sbjct: 234 YDYISERRRLSERETRHFFRQIVSAVHYCHKNGVVHRDLKLENILLDDNCNIKIADFGLS 293
Query: 567 NMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPT 746
N+ +FL+T CGSP YA+PE+++GR Y GPEVD W+ GV+LY L+ GT+PFD
Sbjct: 294 NLYQKDKFLQTFCGSPLYASPEIVNGRPYRGPEVDSWALGVLLYTLVYGTMPFDGFDHKN 353
Query: 747 LFKKIRGGVFYIPEYLNRSVATLLMHMLQVDPLKRATIKDIREHEW 884
L ++I G + P + L+ ML V+P +RATI+DI H W
Sbjct: 354 LIRQISSGEYREPTQPS-DARGLIRWMLMVNPDRRATIEDIANHWW 398
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 22,893,876
Number of extensions: 632339
Number of successful extensions: 2639
Number of sequences better than 1.0e-05: 440
Number of HSP's gapped: 1903
Number of HSP's successfully gapped: 452
Length of query: 350
Length of database: 11,343,932
Length adjustment: 100
Effective length of query: 250
Effective length of database: 8,854,232
Effective search space: 2213558000
Effective search space used: 2213558000
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002888
(1051 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr06 450 e-124
gb|GL896571.2| Sus scrofa unplaced genomic scaffold ChrUScaf4455 66 4e-08
Sscrofa_Chr16 66 4e-08
>Sscrofa_Chr06
|| Length = 157765593
Score = 450 bits (227), Expect = e-124
Identities = 227/227 (100%)
Strand = Plus / Plus
Query: 645 agattgtatgcaggtcctgaggtcgatatctggagctgcggtgttattttgtatgctctt 704
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143553293 agattgtatgcaggtcctgaggtcgatatctggagctgcggtgttattttgtatgctctt 143553352
Query: 705 ctttgtggcacactcccatttgatgatgagcatgtgcctacattgtttaagaagatccga 764
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143553353 ctttgtggcacactcccatttgatgatgagcatgtgcctacattgtttaagaagatccga 143553412
Query: 765 gggggtgttttttatatcccagaatatctcaatcgttctgttgccactctcctgatgcat 824
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143553413 gggggtgttttttatatcccagaatatctcaatcgttctgttgccactctcctgatgcat 143553472
Query: 825 atgctgcaggttgaccccctgaaacgagcaactatcaaagacataag 871
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143553473 atgctgcaggttgaccccctgaaacgagcaactatcaaagacataag 143553519
Score = 339 bits (171), Expect = 2e-90
Identities = 181/183 (98%), Gaps = 1/183 (0%)
Strand = Plus / Plus
Query: 870 agagagcatgaatggtttaaacaagatttgcccagttacttatttcctgaagacccctcc 929
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143568574 agagagcatgaatggtttaaacaagatttgcccagttacttatttcctgaagacccctcc 143568633
Query: 930 tatgatgctaacgtcattgatgatgaagctgtgaaagaagtgtgtgaaaaatttgagtgt 989
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 143568634 tatgatgctaacgtcattgatgatgaggctgtgaaagaagtgtgtgaaaaatttgagtgt 143568693
Query: 990 acagaatcagaagtaatgaacagtttgtatagtggtgaccctcaaga-cagcttgcagtg 1048
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 143568694 acagaatcagaagtaatgaacagtttgtatagtggtgaccctcaagaccagcttgcagtg 143568753
Query: 1049 gct 1051
|||
Sbjct: 143568754 gct 143568756
Score = 291 bits (147), Expect = 4e-76
Identities = 147/147 (100%)
Strand = Plus / Plus
Query: 413 ggttgaagagatggaagccaggcggctctttcagcagattctctctgccgtggattactg 472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143548817 ggttgaagagatggaagccaggcggctctttcagcagattctctctgccgtggattactg 143548876
Query: 473 tcacaggcatatggttgttcatcgagacctgaaaccagagaatgtgctattggatgcaca 532
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143548877 tcacaggcatatggttgttcatcgagacctgaaaccagagaatgtgctattggatgcaca 143548936
Query: 533 gatgaatgccaagatagcagattttgg 559
|||||||||||||||||||||||||||
Sbjct: 143548937 gatgaatgccaagatagcagattttgg 143548963
Score = 281 bits (142), Expect = 4e-73
Identities = 142/142 (100%)
Strand = Plus / Minus
Query: 178 ttggagaacatcaactgacaggccataaagtggcagttaaaattttaaataggcagaaga 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143495144 ttggagaacatcaactgacaggccataaagtggcagttaaaattttaaataggcagaaga 143495085
Query: 238 ttcgcagtttagatgttgttggaaaaataaaacgagaaattcaaaatctaaaactcttcc 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143495084 ttcgcagtttagatgttgttggaaaaataaaacgagaaattcaaaatctaaaactcttcc 143495025
Query: 298 gtcatcctcatattatcaaact 319
||||||||||||||||||||||
Sbjct: 143495024 gtcatcctcatattatcaaact 143495003
Score = 176 bits (89), Expect = 2e-41
Identities = 89/89 (100%)
Strand = Plus / Plus
Query: 558 ggattatctaatatgatgtcagatggtgagtttctgcgaactagttgtgggtctccaaat 617
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143550970 ggattatctaatatgatgtcagatggtgagtttctgcgaactagttgtgggtctccaaat 143551029
Query: 618 tacgcagcacctgaagtcatctcaggcag 646
|||||||||||||||||||||||||||||
Sbjct: 143551030 tacgcagcacctgaagtcatctcaggcag 143551058
Score = 149 bits (75), Expect = 4e-33
Identities = 89/96 (92%)
Strand = Plus / Plus
Query: 320 ataccaggtgatcagcactccgacagannnnnnnatggtaatggaatatgtgtctggtgg 379
||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 143547653 ataccaggtgatcagcactccgacagatttttttatggtaatggaatatgtgtctggtgg 143547712
Query: 380 tgaattatttgattacatctgtaaacatggacgggt 415
||||||||||||||||||||||||||||||||||||
Sbjct: 143547713 tgaattatttgattacatctgtaaacatggacgggt 143547748
>gb|GL896571.2| Sus scrofa unplaced genomic scaffold ChrUScaf4455
Length = 136784
Score = 65.9 bits (33), Expect = 4e-08
Identities = 93/113 (82%)
Strand = Plus / Minus
Query: 648 ttgtatgcaggtcctgaggtcgatatctggagctgcggtgttattttgtatgctcttctt 707
|||||||| ||||| ||||| ||||| |||||| | || |||||| | |||||| | |
Sbjct: 125734 ttgtatgctggtccagaggtagatatatggagcagtggggttattctctatgctttatta 125675
Query: 708 tgtggcacactcccatttgatgatgagcatgtgcctacattgtttaagaagat 760
||||| ||||| |||||||||||||| |||||||| || | |||||||||||
Sbjct: 125674 tgtggaacacttccatttgatgatgatcatgtgccaactctttttaagaagat 125622
>Sscrofa_Chr16
|| Length = 86898991
Score = 65.9 bits (33), Expect = 4e-08
Identities = 93/113 (82%)
Strand = Plus / Plus
Query: 648 ttgtatgcaggtcctgaggtcgatatctggagctgcggtgttattttgtatgctcttctt 707
|||||||| ||||| ||||| ||||| |||||| | || |||||| | |||||| | |
Sbjct: 26857536 ttgtatgctggtccagaggtagatatatggagcagtggggttattctctatgctttatta 26857595
Query: 708 tgtggcacactcccatttgatgatgagcatgtgcctacattgtttaagaagat 760
||||| ||||| |||||||||||||| |||||||| || | |||||||||||
Sbjct: 26857596 tgtggaacacttccatttgatgatgatcatgtgccaactctttttaagaagat 26857648
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 30,701,642
Number of extensions: 173
Number of successful extensions: 173
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 172
Number of HSP's successfully gapped: 8
Length of query: 1051
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1030
Effective length of database: 2,808,413,156
Effective search space: 2892665550680
Effective search space used: 2892665550680
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)