Animal-Genome cDNA 20110601C-002939

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-002939
         (1576 letters)

Database: RefSeq49_BP.fasta 
           33,088 sequences; 17,681,374 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001068865.1| tyrosine-protein kinase CSK [Bos taurus].         424   e-142
Alignment   gi|NP_001030183.1| megakaryocyte-associated tyrosine-protein ki...   201   6e-63
Alignment   gi|NP_001069436.1| tyrosine-protein kinase Blk [Bos taurus].          97   3e-27
Alignment   gi|NP_001104274.1| v-src sarcoma (Schmidt-Ruppin A-2) viral onc...   100   8e-27
Alignment   gi|NP_001029506.1| lymphocyte-specific protein tyrosine kinase ...    94   8e-27
Alignment   gi|NP_001094530.1| tyrosine-protein kinase Yes [Bos taurus].          98   2e-26
Alignment   gi|NP_001071440.1| tyrosine-protein kinase Fyn [Bos taurus].          91   7e-25
Alignment   gi|NP_001171211.1| tyrosine-protein kinase Lyn [Bos taurus].          89   4e-23
Alignment   gi|NP_001092461.1| tyrosine-protein kinase Fgr [Bos taurus].          82   2e-22
Alignment   gi|NP_001103664.1| hemopoietic cell kinase isoform 1 [Bos tauru...    81   1e-21

>ref|NP_001068865.1| tyrosine-protein kinase CSK [Bos taurus].
          Length = 450

 Score =  424 bits (1091), Expect(2) = e-142
 Identities = 203/204 (99%), Positives = 204/204 (100%)
 Frame = +3

Query: 726  MSAIQAAWPSGTECIAKYNFHGTAEQDLPFCKGDVLTIVAVTKDPNWYKAKNKVGREGII 905
            MSAIQAAWPSGTECIAKYNFHGTAEQDLPFCKGDVLTIVAVTKDPNWYKAKNKVGREGII
Sbjct: 1    MSAIQAAWPSGTECIAKYNFHGTAEQDLPFCKGDVLTIVAVTKDPNWYKAKNKVGREGII 60

Query: 906  PANYVQKREGVKAGTKLSLMPWFHGKITREQAERLLCPPETGLFLVRESTNYPGDYTLCV 1085
            PANYVQKREGVKAGTKLSLMPWFHGKITREQAERLLCPPETGLFLVRESTNYPGDYTLCV
Sbjct: 61   PANYVQKREGVKAGTKLSLMPWFHGKITREQAERLLCPPETGLFLVRESTNYPGDYTLCV 120

Query: 1086 SCDGKVEHYRIMYHASKLSIDEEVYFENLMQLVEHYTSDADGLCTRLIKPKLMEGTVAAQ 1265
            SCDGKVEHYRIMYHASKLSIDEEVYFENLMQLVEHYTSDADGLCTRLIKPK+MEGTVAAQ
Sbjct: 121  SCDGKVEHYRIMYHASKLSIDEEVYFENLMQLVEHYTSDADGLCTRLIKPKVMEGTVAAQ 180

Query: 1266 DEFFRSGWALNMKDLKLLQTIGKG 1337
            DEFFRSGWALNMKDLKLLQTIGKG
Sbjct: 181  DEFFRSGWALNMKDLKLLQTIGKG 204



 Score =  101 bits (252), Expect(2) = e-142
 Identities = 56/83 (67%), Positives = 62/83 (74%)
 Frame = +1

Query: 1327 LGRGEFGDVMLGDYRGNKVAVQCIKNDAPAQAFLAEASVMNQLRHNNLGTASGRDR*RTK 1506
            +G+GEFGDVMLGDYRGNKVAV+CIKNDA AQAFLAEASVM QLRH+NL    G      K
Sbjct: 201  IGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIV-EEK 259

Query: 1507 AGSTSSHSPWPRGSLVDYLRSRG 1575
            +G         +GSLVDYLRSRG
Sbjct: 260  SGLYIVTEYMAKGSLVDYLRSRG 282


>ref|NP_001030183.1| megakaryocyte-associated tyrosine-protein kinase [Bos taurus].
          Length = 485

 Score =  201 bits (511), Expect(2) = 6e-63
 Identities = 95/198 (47%), Positives = 136/198 (68%), Gaps = 1/198 (0%)
 Frame = +3

Query: 747  WPSGTECIAKYNFHGTAEQDLPFCKGDVLTIVAVTKDPNWYKAKNKV-GREGIIPANYVQ 923
            W  GT+CI K         +L FCKGDV+TI+   ++ +WY+AK+   G+EG++ A  ++
Sbjct: 25   WAPGTQCITKCEHTRPKPGELAFCKGDVVTILEACENKSWYRAKHHASGQEGLLAAGALR 84

Query: 924  KREGVKAGTKLSLMPWFHGKITREQAERLLCPPETGLFLVRESTNYPGDYTLCVSCDGKV 1103
            +RE + A  KLSLMPWFHGKI+ ++A + L PPE GLFLVRES  +PGDY LCVS    V
Sbjct: 85   EREALSADPKLSLMPWFHGKISGQEAVQQLQPPEDGLFLVRESARHPGDYVLCVSFGRDV 144

Query: 1104 EHYRIMYHASKLSIDEEVYFENLMQLVEHYTSDADGLCTRLIKPKLMEGTVAAQDEFFRS 1283
             HYR+++    L+IDEEV F NLM +VE+Y+ D   +CT+L++PK  +GT +A++E  ++
Sbjct: 145  IHYRVLHRDGHLTIDEEVCFCNLMDMVEYYSKDQGAICTKLVRPKRKQGTKSAEEELAKA 204

Query: 1284 GWALNMKDLKLLQTIGKG 1337
            GW LN++ L L   IG+G
Sbjct: 205  GWLLNLQHLTLGAQIGEG 222



 Score = 59.7 bits (143), Expect(2) = 6e-63
 Identities = 36/83 (43%), Positives = 49/83 (59%)
 Frame = +1

Query: 1327 LGRGEFGDVMLGDYRGNKVAVQCIKNDAPAQAFLAEASVMNQLRHNNLGTASGRDR*RTK 1506
            +G GEFG V+ G+Y G KVAV+ IK D  AQAFL E +VM +++H NL    G       
Sbjct: 219  IGEGEFGAVLQGEYLGQKVAVKNIKCDVTAQAFLDETAVMTKVQHKNLVRLLGV---ILH 275

Query: 1507 AGSTSSHSPWPRGSLVDYLRSRG 1575
             G         +G+LV++LR+RG
Sbjct: 276  QGLYIVMEHVSKGNLVNFLRTRG 298


>ref|NP_001069436.1| tyrosine-protein kinase Blk [Bos taurus].
          Length = 501

 Score = 97.4 bits (241), Expect(2) = 3e-27
 Identities = 70/204 (34%), Positives = 107/204 (52%), Gaps = 14/204 (6%)
 Frame = +3

Query: 768  IAKYNFHGTAEQDLPFCKGDVLTIVAVTKDPNWYKAKNKV-GREGIIPANYVQKREGVKA 944
            +A Y++    ++DL   KG+ L I+  T D  W+ AK+ + GREG +P+N+V + E    
Sbjct: 60   VALYDYKAMNDRDLQMLKGEKLQILKETGD--WWLAKSLITGREGYVPSNFVARVE---- 113

Query: 945  GTKLSLMPWFHGKITREQAERLLCPP--ETGLFLVRESTNYPGDYTLCV---SCDGKV-E 1106
               L +  WF   I R  AER L  P  + G FL+RES    G ++L V   +  G+V +
Sbjct: 114  --TLEVEKWFFRSICRRDAERQLLAPVNKAGAFLIRESETSKGAFSLSVKDVTTQGEVIK 171

Query: 1107 HYRIMYHASKLSIDEEVY-------FENLMQLVEHYTSDADGLCTRLIKPKLMEGTVAAQ 1265
            HY+I       S+DE  Y       F  L  LV+HY+   DGLC RL  P +   ++A Q
Sbjct: 172  HYKIR------SLDEGGYYISPRSAFPTLQALVQHYSKKGDGLCQRLTHPCV---SLAPQ 222

Query: 1266 DEFFRSGWALNMKDLKLLQTIGKG 1337
            + + +  W +  + LKL++ +G G
Sbjct: 223  NPWGQDEWEIPRQSLKLVRKLGSG 246



 Score = 44.3 bits (103), Expect(2) = 3e-27
 Identities = 23/52 (44%), Positives = 35/52 (67%), Gaps = 2/52 (3%)
 Frame = +1

Query: 1321 RPLGRGEFGDVMLGDYRGN-KVAVQCIKNDAPA-QAFLAEASVMNQLRHNNL 1470
            R LG G+FG+V +G Y+ N KVA++ +K    + +AFL EA++M  L+H  L
Sbjct: 241  RKLGSGQFGEVWMGYYKNNIKVAIKTLKEGTMSPEAFLGEANLMKTLQHERL 292


>ref|NP_001104274.1| v-src sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog [Bos
            taurus].
          Length = 542

 Score =  100 bits (248), Expect(2) = 8e-27
 Identities = 77/223 (34%), Positives = 108/223 (48%), Gaps = 11/223 (4%)
 Frame = +3

Query: 702  GDARSSEKMSAIQAAWP-SG--TECIAKYNFHGTAEQDLPFCKGDVLTIVAVTKDPNWYK 872
            G   SS+ +++ Q A P SG  T  +A Y++    E DL F KG+ L IV  T+   W  
Sbjct: 71   GGFNSSDTVTSPQRAGPLSGGVTTFVALYDYESRTETDLSFKKGERLQIVNNTEGDWWLA 130

Query: 873  AKNKVGREGIIPANYVQKREGVKAGTKLSLMPWFHGKITREQAERLLCPPET--GLFLVR 1046
                 G+ G IP+NYV   + ++A        W+ GKITR ++ERLL   E   G FLVR
Sbjct: 131  HSLSTGQTGYIPSNYVAPSDSIQA------EEWYFGKITRRESERLLLNAENPRGTFLVR 184

Query: 1047 ESTNYPGDYTLCVS----CDG-KVEHYRI-MYHASKLSIDEEVYFENLMQLVEHYTSDAD 1208
            ES    G Y L VS      G  V+HY+I    +    I     F +L QLV +Y+  AD
Sbjct: 185  ESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFNSLQQLVAYYSKHAD 244

Query: 1209 GLCTRLIKPKLMEGTVAAQDEFFRSGWALNMKDLKLLQTIGKG 1337
            GLC RL    +   +        +  W +  + L+L   +G+G
Sbjct: 245  GLCHRL--TTVCPTSKPQTQGLAKDAWEIPRESLRLEVKLGQG 285



 Score = 40.0 bits (92), Expect(2) = 8e-27
 Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 2/50 (4%)
 Frame = +1

Query: 1327 LGRGEFGDVMLGDYRGN-KVAVQCIKNDAPA-QAFLAEASVMNQLRHNNL 1470
            LG+G FG+V +G + G  +VA++ +K    + +AFL EA VM +LRH  L
Sbjct: 282  LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKL 331


>ref|NP_001029506.1| lymphocyte-specific protein tyrosine kinase [Bos taurus].
          Length = 509

 Score = 94.0 bits (232), Expect(2) = 8e-27
 Identities = 70/199 (35%), Positives = 105/199 (52%), Gaps = 9/199 (4%)
 Frame = +3

Query: 768  IAKYNFHGTAEQDLPFCKGDVLTIVAVTKDPNWYKAKN-KVGREGIIPANYVQKREGVKA 944
            IA +++  + + DL F KG+ L I+   ++  W+KA++   G+EG IP N+V K      
Sbjct: 67   IALHSYEPSHDGDLGFEKGEQLRILE--QNGEWWKAQSLTTGQEGFIPFNFVAK------ 118

Query: 945  GTKLSLMPWFHGKITREQAER-LLCPPET-GLFLVRESTNYPGDYTLCV----SCDGKV- 1103
               L   PWF   ++R+ AER LL P  T G FL+RES +  G ++L V       G+V 
Sbjct: 119  ANSLEPEPWFFKTLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQTQGEVV 178

Query: 1104 EHYRIM-YHASKLSIDEEVYFENLMQLVEHYTSDADGLCTRLIKPKLMEGTVAAQDEFFR 1280
            +HY+I         I   V F  L +LV HY + +DGLCTRL +P     T   Q  ++ 
Sbjct: 179  KHYKIRNLDKGGFYISPRVTFPGLHELVRHYMNTSDGLCTRLSRPC---QTQKPQKPWWE 235

Query: 1281 SGWALNMKDLKLLQTIGKG 1337
              W +  + LKL++ +G G
Sbjct: 236  DEWEVPRETLKLVERLGAG 254



 Score = 46.2 bits (108), Expect(2) = 8e-27
 Identities = 25/50 (50%), Positives = 36/50 (72%), Gaps = 2/50 (4%)
 Frame = +1

Query: 1327 LGRGEFGDVMLGDYRGN-KVAVQCIKNDAPA-QAFLAEASVMNQLRHNNL 1470
            LG G+FG+V +G Y G+ KVAV+ +K  + +  AFLAEA++M QL+H  L
Sbjct: 251  LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRL 300


>ref|NP_001094530.1| tyrosine-protein kinase Yes [Bos taurus].
          Length = 541

 Score = 98.2 bits (243), Expect(2) = 2e-26
 Identities = 69/222 (31%), Positives = 108/222 (48%), Gaps = 14/222 (6%)
 Frame = +3

Query: 714  SSEKMSAIQAAWPSG-----TECIAKYNFHGTAEQDLPFCKGDVLTIVAVTKDPNWYKAK 878
            +S   S + +++P+G     T  +A Y++     +DL F KG+   I+  T+   W    
Sbjct: 72   ASSSFSVVPSSYPAGLTGGVTIFVALYDYEARTTEDLSFKKGERFQIINNTEGDWWEARS 131

Query: 879  NKVGREGIIPANYVQKREGVKAGTKLSLMPWFHGKITREQAERLLCPP--ETGLFLVRES 1052
               G+ G IP+NYV   + ++A        W+ GK+ R+ AERLL  P  + G+FLVRES
Sbjct: 132  IATGKNGYIPSNYVAPADSIQA------EEWYFGKMGRKDAERLLLNPGNQRGIFLVRES 185

Query: 1053 TNYPGDYTLCVS-----CDGKVEHYRI-MYHASKLSIDEEVYFENLMQLVEHYTSDADGL 1214
                G Y+L +          V+HY+I         I     F+ L +LV+HYT  ADGL
Sbjct: 186  ETTKGAYSLSIRDWDEVRGDNVKHYKIRKLDNGGYYITTRAQFDTLQKLVKHYTEHADGL 245

Query: 1215 CTRLIKPKLMEGTVAAQDE-FFRSGWALNMKDLKLLQTIGKG 1337
            C +L     +  TV  Q +   +  W +  + L+L   +G+G
Sbjct: 246  CHKL---TTVCPTVKPQTQGLAKDAWEIPRESLRLEVKLGQG 284



 Score = 40.8 bits (94), Expect(2) = 2e-26
 Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 2/50 (4%)
 Frame = +1

Query: 1327 LGRGEFGDVMLGDYRGN-KVAVQCIK-NDAPAQAFLAEASVMNQLRHNNL 1470
            LG+G FG+V +G + G  KVA++ +K      +AFL EA +M +LRH+ L
Sbjct: 281  LGQGCFGEVWMGTWNGTTKVAIKTLKPGTMMPEAFLQEAQIMKKLRHDKL 330


>ref|NP_001071440.1| tyrosine-protein kinase Fyn [Bos taurus].
          Length = 537

 Score = 90.5 bits (223), Expect(2) = 7e-25
 Identities = 71/229 (31%), Positives = 111/229 (48%), Gaps = 17/229 (7%)
 Frame = +3

Query: 702  GDARSSEKMSAIQAAWPSG-TECIAKYNFHGTAEQDLPFCKGDVLTIVAVTKDPNWYKAK 878
            G   SS     ++    +G T  +A Y++    E DL F KG+   I+  + + +W++A+
Sbjct: 65   GGVNSSSHTGTLRTRGGTGVTLFVALYDYEARTEDDLSFHKGEKFQILN-SSEGDWWEAR 123

Query: 879  N-KVGREGIIPANYVQKREGVKAGTKLSLMPWFHGKITREQAERLLCP--PETGLFLVRE 1049
            +   G  G IP+NYV   + ++A        W+ GK+ R+ AER L       G FL+RE
Sbjct: 124  SLTTGETGYIPSNYVAPVDSIQA------EEWYFGKLGRKDAERQLLSFGNPRGTFLIRE 177

Query: 1050 STNYPGDYTLCVS--CDGKVEHYRIMYHASKLS-----IDEEVYFENLMQLVEHYTSDAD 1208
            S    G Y+L +    D K +H +  Y   KL      I     FE L QLV+HY+  A 
Sbjct: 178  SETTKGAYSLSIRDWDDMKGDHVK-HYKIRKLDNGGYYITTRAQFETLQQLVQHYSERAA 236

Query: 1209 GLCTRLI------KPKLMEGTVAAQDEFFRSGWALNMKDLKLLQTIGKG 1337
            GLC RL+       P+L + +V  +D      W +  + L+L++ +G G
Sbjct: 237  GLCCRLVVPCHKGMPRLTDLSVKTKDV-----WEIPRESLQLIKRLGNG 280



 Score = 43.1 bits (100), Expect(2) = 7e-25
 Identities = 21/50 (42%), Positives = 34/50 (68%), Gaps = 2/50 (4%)
 Frame = +1

Query: 1327 LGRGEFGDVMLGDYRGN-KVAVQCIK-NDAPAQAFLAEASVMNQLRHNNL 1470
            LG G+FG+V +G + GN KVA++ +K      ++FL EA +M +L+H+ L
Sbjct: 277  LGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMKKLKHDKL 326


>ref|NP_001171211.1| tyrosine-protein kinase Lyn [Bos taurus].
          Length = 512

 Score = 88.6 bits (218), Expect(2) = 4e-23
 Identities = 65/204 (31%), Positives = 96/204 (47%), Gaps = 10/204 (4%)
 Frame = +3

Query: 756  GTECIAKYNFHGTAEQDLPFCKGDVLTIVAVTKDPNWYKAKN-KVGREGIIPANYVQKRE 932
            G   IA Y + G    DL F KG+ + ++   +   W+KAK+    +EG IP+NYV K  
Sbjct: 65   GDIVIALYPYDGIHPDDLSFKKGEKMKVLE--QHGEWWKAKSISTKKEGFIPSNYVAKVN 122

Query: 933  GVKAGTKLSLMPWFHGKITREQAERLLCPP--ETGLFLVRESTNYPGDYTLCVSCDGKVE 1106
                   L    WF   ITR+ AER L  P    G FL+RES    G Y+L V  D    
Sbjct: 123  ------TLETEEWFFKDITRKDAERQLLAPGNSAGAFLIRESETLKGSYSLSVR-DYDPV 175

Query: 1107 HYRIMYHASKLSIDEEVY-------FENLMQLVEHYTSDADGLCTRLIKPKLMEGTVAAQ 1265
            H  ++ H    S+D   Y       F  +  +++HY   +DGLC RL K  +   +   Q
Sbjct: 176  HGDVIKHYKIRSLDNGGYYISPRITFPCISDMIKHYQKQSDGLCRRLEKACI---SPKPQ 232

Query: 1266 DEFFRSGWALNMKDLKLLQTIGKG 1337
              + +  W +  + +KL++ +G G
Sbjct: 233  KPWDKDAWEIPRESIKLVKRLGAG 256



 Score = 39.3 bits (90), Expect(2) = 4e-23
 Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 2/50 (4%)
 Frame = +1

Query: 1327 LGRGEFGDVMLGDYRGN-KVAVQCIK-NDAPAQAFLAEASVMNQLRHNNL 1470
            LG G+FG+V +G Y  + KVAV+ +       QAFL EA++M  L+H+ L
Sbjct: 253  LGAGQFGEVWMGYYNNSTKVAVKTLNPGTMSVQAFLEEANLMKTLQHDKL 302


>ref|NP_001092461.1| tyrosine-protein kinase Fgr [Bos taurus].
          Length = 527

 Score = 81.6 bits (200), Expect(2) = 2e-22
 Identities = 61/207 (29%), Positives = 90/207 (43%), Gaps = 14/207 (6%)
 Frame = +3

Query: 759  TECIAKYNFHGTAEQDLPFCKGDVLTIVAVTKDPNWYKAKNKVGREGIIPANYVQKREGV 938
            T  IA Y++    E DL F KG+   I+  T+   W       G  G IP+NYV   + +
Sbjct: 78   TMFIALYDYEARTEDDLTFTKGEKFHILNNTEGDWWEARSLSSGHTGYIPSNYVAPVDSI 137

Query: 939  KAGTKLSLMPWFHGKITREQAERLLCPP--ETGLFLVRESTNYPGDYTLCV-----SCDG 1097
            +A        W+ GKI R+ AER L  P    G FL+RES    G Y+L +     +   
Sbjct: 138  QA------EEWYFGKIGRKDAERQLLSPGNSRGAFLIRESETTKGAYSLSIRDWDQTRGD 191

Query: 1098 KVEHYRI-MYHASKLSIDEEVYFENLMQLVEHYTSDADGLCTRL------IKPKLMEGTV 1256
             V+HY+I         I     F+ + +LV+HY    DGLC  L      +KP+ +    
Sbjct: 192  HVKHYKIRKLDTGGYYITTRAQFDTVQELVQHYLEVNDGLCHLLTAACTTMKPQTL---- 247

Query: 1257 AAQDEFFRSGWALNMKDLKLLQTIGKG 1337
                   +  W ++   + L   +G G
Sbjct: 248  ----GLAKDAWEISRSSITLEHRLGTG 270



 Score = 43.9 bits (102), Expect(2) = 2e-22
 Identities = 26/50 (52%), Positives = 34/50 (68%), Gaps = 2/50 (4%)
 Frame = +1

Query: 1327 LGRGEFGDVMLGDYRGN-KVAVQCIKNDAPA-QAFLAEASVMNQLRHNNL 1470
            LG G FGDV LG + G+ KVAV+ +K    + +AFLAEA +M  LRH+ L
Sbjct: 267  LGTGCFGDVWLGTWNGSTKVAVKTLKPGTMSPKAFLAEAQIMKLLRHDKL 316


>ref|NP_001103664.1| hemopoietic cell kinase isoform 1 [Bos taurus].
          Length = 524

 Score = 80.9 bits (198), Expect(2) = 1e-21
 Identities = 59/200 (29%), Positives = 96/200 (48%), Gaps = 10/200 (5%)
 Frame = +3

Query: 768  IAKYNFHGTAEQDLPFCKGDVLTIVAVTKDPNWYKAKNKVGR-EGIIPANYVQKREGVKA 944
            +A Y++     +DL F KGD +  V + +   W++A++   R EG IP+NYV +      
Sbjct: 82   VALYDYDAIHHEDLSFQKGDQM--VVLEESGEWWRARSLATRKEGYIPSNYVARVNS--- 136

Query: 945  GTKLSLMPWFHGKITREQAERLLCPPET--GLFLVRESTNYPGDYTLCVSCDGKVEHYRI 1118
               L    WF   I+R+ AER L  P    G F++R+S    G Y+L V  D   +H   
Sbjct: 137  ---LETEEWFFKGISRKDAERQLLAPGNVLGSFMIRDSETTKGSYSLSVR-DYDPQHRDT 192

Query: 1119 MYHASKLSIDEEVY-------FENLMQLVEHYTSDADGLCTRLIKPKLMEGTVAAQDEFF 1277
            + H    ++D   +       F +L +LV HY   +DGLC +L  P +   +   Q  + 
Sbjct: 193  VKHYKIRTLDNGGFYISPRSTFGSLQELVAHYKKASDGLCQKLTVPCM---SSKPQKPWE 249

Query: 1278 RSGWALNMKDLKLLQTIGKG 1337
            +  W +  + LK+ + +G G
Sbjct: 250  KDAWEIPRESLKMEKKLGAG 269



 Score = 42.0 bits (97), Expect(2) = 1e-21
 Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 9/92 (9%)
 Frame = +1

Query: 1321 RPLGRGEFGDVMLGDY-RGNKVAVQCIK-NDAPAQAFLAEASVMNQLRHNNLGTASGRDR 1494
            + LG G+FG+V +  Y +  KVAV+ +K      +AFLAEA++M  L+H+ L        
Sbjct: 264  KKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANLMKTLQHDKL-------- 315

Query: 1495 *RTKAGSTSSHSP-------WPRGSLVDYLRS 1569
               K  +  +  P         +GSL+D+L+S
Sbjct: 316  --VKLHAVVTEEPIYIITEFMAKGSLLDFLKS 345


  Database: RefSeq49_BP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 17,681,374
  Number of sequences in database:  33,088
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 65,252,626
Number of extensions: 2104231
Number of successful extensions: 13034
Number of sequences better than 1.0e-05: 69
Number of HSP's gapped: 12809
Number of HSP's successfully gapped: 85
Length of query: 525
Length of database: 17,681,374
Length adjustment: 107
Effective length of query: 418
Effective length of database: 14,140,958
Effective search space: 5910920444
Effective search space used: 5910920444
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-002939
         (1576 letters)

Database: RefSeq49_CP.fasta 
           33,336 sequences; 18,874,504 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_544774.2| PREDICTED: similar to c-src tyrosine kinase iso...   424   e-138
Alignment   gi|XP_853247.1| PREDICTED: similar to c-src tyrosine kinase iso...   424   e-138
Alignment   gi|XP_867112.1| PREDICTED: similar to c-src tyrosine kinase iso...   413   e-135
Alignment   gi|XP_854815.1| PREDICTED: similar to Megakaryocyte-associated ...   197   1e-61
Alignment   gi|XP_851972.1| PREDICTED: similar to Proto-oncogene tyrosine-p...    96   2e-27
Alignment   gi|XP_543206.2| PREDICTED: similar to Tyrosine-protein kinase B...    96   9e-27
Alignment   gi|XP_865816.1| PREDICTED: similar to Proto-oncogene tyrosine-p...   100   1e-26
Alignment   gi|XP_865870.1| PREDICTED: similar to Proto-oncogene tyrosine-p...   100   1e-26
Alignment   gi|XP_547654.1| PREDICTED: similar to Proto-oncogene tyrosine-p...    98   2e-26
Alignment   gi|XP_542988.2| PREDICTED: similar to Rous sarcoma oncogene iso...    96   1e-25

>ref|XP_544774.2| PREDICTED: similar to c-src tyrosine kinase isoform 4 [Canis
            familiaris].
          Length = 465

 Score =  424 bits (1091), Expect(2) = e-138
 Identities = 203/204 (99%), Positives = 204/204 (100%)
 Frame = +3

Query: 726  MSAIQAAWPSGTECIAKYNFHGTAEQDLPFCKGDVLTIVAVTKDPNWYKAKNKVGREGII 905
            MSAIQAAWPSGTECIAKYNFHGTAEQDLPFCKGDVLTIVAVTKDPNWYKAKNKVGREGII
Sbjct: 1    MSAIQAAWPSGTECIAKYNFHGTAEQDLPFCKGDVLTIVAVTKDPNWYKAKNKVGREGII 60

Query: 906  PANYVQKREGVKAGTKLSLMPWFHGKITREQAERLLCPPETGLFLVRESTNYPGDYTLCV 1085
            PANYVQKREGVKAGTKLSLMPWFHGKITREQAERLLCPPETGLFLVRESTNYPGDYTLCV
Sbjct: 61   PANYVQKREGVKAGTKLSLMPWFHGKITREQAERLLCPPETGLFLVRESTNYPGDYTLCV 120

Query: 1086 SCDGKVEHYRIMYHASKLSIDEEVYFENLMQLVEHYTSDADGLCTRLIKPKLMEGTVAAQ 1265
            SCDGKVEHYRIMYHASKLSIDEEVYFENLMQLVEHYTSDADGLCTRLIKPK+MEGTVAAQ
Sbjct: 121  SCDGKVEHYRIMYHASKLSIDEEVYFENLMQLVEHYTSDADGLCTRLIKPKVMEGTVAAQ 180

Query: 1266 DEFFRSGWALNMKDLKLLQTIGKG 1337
            DEFFRSGWALNMKDLKLLQTIGKG
Sbjct: 181  DEFFRSGWALNMKDLKLLQTIGKG 204



 Score = 89.4 bits (220), Expect(2) = e-138
 Identities = 55/98 (56%), Positives = 60/98 (61%), Gaps = 15/98 (15%)
 Frame = +1

Query: 1327 LGRGEFGDVMLGDYRG---------------NKVAVQCIKNDAPAQAFLAEASVMNQLRH 1461
            +G+GEFGDVMLGDY G               NKVAV+CIKNDA AQAFLAEASVM QLRH
Sbjct: 201  IGKGEFGDVMLGDYEGTXXXXXXXXXXXXXGNKVAVKCIKNDAAAQAFLAEASVMTQLRH 260

Query: 1462 NNLGTASGRDR*RTKAGSTSSHSPWPRGSLVDYLRSRG 1575
            +NL    G      K G         +GSLVDYLRSRG
Sbjct: 261  SNLVQLLGVIV-EEKGGLYIVTEYMAKGSLVDYLRSRG 297


>ref|XP_853247.1| PREDICTED: similar to c-src tyrosine kinase isoform 5 [Canis
            familiaris].
          Length = 465

 Score =  424 bits (1091), Expect(2) = e-138
 Identities = 203/204 (99%), Positives = 204/204 (100%)
 Frame = +3

Query: 726  MSAIQAAWPSGTECIAKYNFHGTAEQDLPFCKGDVLTIVAVTKDPNWYKAKNKVGREGII 905
            MSAIQAAWPSGTECIAKYNFHGTAEQDLPFCKGDVLTIVAVTKDPNWYKAKNKVGREGII
Sbjct: 1    MSAIQAAWPSGTECIAKYNFHGTAEQDLPFCKGDVLTIVAVTKDPNWYKAKNKVGREGII 60

Query: 906  PANYVQKREGVKAGTKLSLMPWFHGKITREQAERLLCPPETGLFLVRESTNYPGDYTLCV 1085
            PANYVQKREGVKAGTKLSLMPWFHGKITREQAERLLCPPETGLFLVRESTNYPGDYTLCV
Sbjct: 61   PANYVQKREGVKAGTKLSLMPWFHGKITREQAERLLCPPETGLFLVRESTNYPGDYTLCV 120

Query: 1086 SCDGKVEHYRIMYHASKLSIDEEVYFENLMQLVEHYTSDADGLCTRLIKPKLMEGTVAAQ 1265
            SCDGKVEHYRIMYHASKLSIDEEVYFENLMQLVEHYTSDADGLCTRLIKPK+MEGTVAAQ
Sbjct: 121  SCDGKVEHYRIMYHASKLSIDEEVYFENLMQLVEHYTSDADGLCTRLIKPKVMEGTVAAQ 180

Query: 1266 DEFFRSGWALNMKDLKLLQTIGKG 1337
            DEFFRSGWALNMKDLKLLQTIGKG
Sbjct: 181  DEFFRSGWALNMKDLKLLQTIGKG 204



 Score = 89.4 bits (220), Expect(2) = e-138
 Identities = 55/98 (56%), Positives = 60/98 (61%), Gaps = 15/98 (15%)
 Frame = +1

Query: 1327 LGRGEFGDVMLGDYRG---------------NKVAVQCIKNDAPAQAFLAEASVMNQLRH 1461
            +G+GEFGDVMLGDY G               NKVAV+CIKNDA AQAFLAEASVM QLRH
Sbjct: 201  IGKGEFGDVMLGDYEGTXXXXXXXXXXXXXGNKVAVKCIKNDAAAQAFLAEASVMTQLRH 260

Query: 1462 NNLGTASGRDR*RTKAGSTSSHSPWPRGSLVDYLRSRG 1575
            +NL    G      K G         +GSLVDYLRSRG
Sbjct: 261  SNLVQLLGVIV-EEKGGLYIVTEYMAKGSLVDYLRSRG 297


>ref|XP_867112.1| PREDICTED: similar to c-src tyrosine kinase isoform 6 [Canis
            familiaris].
          Length = 483

 Score =  413 bits (1062), Expect(2) = e-135
 Identities = 203/222 (91%), Positives = 204/222 (91%), Gaps = 18/222 (8%)
 Frame = +3

Query: 726  MSAIQAAWPSGTECIAKYNFHGTAEQDLPFCKGDVLTIVAVTKDPNWYKAKNKVGREGII 905
            MSAIQAAWPSGTECIAKYNFHGTAEQDLPFCKGDVLTIVAVTKDPNWYKAKNKVGREGII
Sbjct: 1    MSAIQAAWPSGTECIAKYNFHGTAEQDLPFCKGDVLTIVAVTKDPNWYKAKNKVGREGII 60

Query: 906  PANYVQKREGVKAGTKLSLMPWFHGKITREQAERLLCPPETGLFLVRESTNYPGDYTLCV 1085
            PANYVQKREGVKAGTKLSLMPWFHGKITREQAERLLCPPETGLFLVRESTNYPGDYTLCV
Sbjct: 61   PANYVQKREGVKAGTKLSLMPWFHGKITREQAERLLCPPETGLFLVRESTNYPGDYTLCV 120

Query: 1086 SCDGKVEHYRIMYHASKLSIDEEVYFENLMQLVEHYTSDADGLCTRLIKPKLMEGTVAAQ 1265
            SCDGKVEHYRIMYHASKLSIDEEVYFENLMQLVEHYTSDADGLCTRLIKPK+MEGTVAAQ
Sbjct: 121  SCDGKVEHYRIMYHASKLSIDEEVYFENLMQLVEHYTSDADGLCTRLIKPKVMEGTVAAQ 180

Query: 1266 DEFFRS------------------GWALNMKDLKLLQTIGKG 1337
            DEFFRS                  GWALNMKDLKLLQTIGKG
Sbjct: 181  DEFFRSECHPRPRAHLLPRLLPRGGWALNMKDLKLLQTIGKG 222



 Score = 89.4 bits (220), Expect(2) = e-135
 Identities = 55/98 (56%), Positives = 60/98 (61%), Gaps = 15/98 (15%)
 Frame = +1

Query: 1327 LGRGEFGDVMLGDYRG---------------NKVAVQCIKNDAPAQAFLAEASVMNQLRH 1461
            +G+GEFGDVMLGDY G               NKVAV+CIKNDA AQAFLAEASVM QLRH
Sbjct: 219  IGKGEFGDVMLGDYEGTXXXXXXXXXXXXXGNKVAVKCIKNDAAAQAFLAEASVMTQLRH 278

Query: 1462 NNLGTASGRDR*RTKAGSTSSHSPWPRGSLVDYLRSRG 1575
            +NL    G      K G         +GSLVDYLRSRG
Sbjct: 279  SNLVQLLGVIV-EEKGGLYIVTEYMAKGSLVDYLRSRG 315


>ref|XP_854815.1| PREDICTED: similar to Megakaryocyte-associated tyrosine-protein
            kinase (Tyrosine-protein kinase CTK) (Protein kinase HYL)
            (Hematopoietic consensus tyrosine-lacking kinase) [Canis
            familiaris].
          Length = 843

 Score =  197 bits (500), Expect(2) = 1e-61
 Identities = 95/198 (47%), Positives = 133/198 (67%), Gaps = 1/198 (0%)
 Frame = +3

Query: 747  WPSGTECIAKYNFHGTAEQDLPFCKGDVLTIVAVTKDPNWYKAKNKV-GREGIIPANYVQ 923
            W  GT+CI K         +L F KGDV+TI+   +  +WY+AK+   G+EG++ A  ++
Sbjct: 286  WAPGTQCITKCEHMRPKPGELAFRKGDVVTILEACESKSWYRAKHHASGQEGLLAAGALR 345

Query: 924  KREGVKAGTKLSLMPWFHGKITREQAERLLCPPETGLFLVRESTNYPGDYTLCVSCDGKV 1103
            +RE + A  KLSLMPWFHGKI+ ++A + L PPE GLFLVRES  +PGDY LCVS    V
Sbjct: 346  EREALSADPKLSLMPWFHGKISGQEAVQQLQPPEDGLFLVRESARHPGDYVLCVSFGRDV 405

Query: 1104 EHYRIMYHASKLSIDEEVYFENLMQLVEHYTSDADGLCTRLIKPKLMEGTVAAQDEFFRS 1283
             HYR+++    L+IDE V F NLM +VEHY+ D   +CT+L+KPK  +GT +A++E  ++
Sbjct: 406  IHYRVLHRDGHLTIDEAVCFCNLMDMVEHYSKDKGAICTKLVKPKRKQGTRSAEEELAKA 465

Query: 1284 GWALNMKDLKLLQTIGKG 1337
            GW LN++ L L   IG+G
Sbjct: 466  GWLLNLQHLTLGARIGEG 483



 Score = 60.1 bits (144), Expect(2) = 1e-61
 Identities = 36/83 (43%), Positives = 49/83 (59%)
 Frame = +1

Query: 1327 LGRGEFGDVMLGDYRGNKVAVQCIKNDAPAQAFLAEASVMNQLRHNNLGTASGRDR*RTK 1506
            +G GEFG V+ G+Y G KVAV+ IK D  AQAFL E +VM +++H NL    G       
Sbjct: 480  IGEGEFGAVLQGEYLGQKVAVKNIKCDVTAQAFLDETAVMTKMQHKNLVRLLGV---ILH 536

Query: 1507 AGSTSSHSPWPRGSLVDYLRSRG 1575
             G         +G+LV++LR+RG
Sbjct: 537  QGLYIVMEHVSKGNLVNFLRTRG 559


>ref|XP_851972.1| PREDICTED: similar to Proto-oncogene tyrosine-protein kinase LCK
            (P56-LCK) (LSK) (T cell-specific protein-tyrosine kinase)
            isoform 2 [Canis familiaris].
          Length = 509

 Score = 96.3 bits (238), Expect(2) = 2e-27
 Identities = 69/199 (34%), Positives = 105/199 (52%), Gaps = 9/199 (4%)
 Frame = +3

Query: 768  IAKYNFHGTAEQDLPFCKGDVLTIVAVTKDPNWYKAKN-KVGREGIIPANYVQKREGVKA 944
            IA +++  + + DL F KG+ L I+   ++  W+KA++   G+EG IP N+V K      
Sbjct: 67   IALHSYEPSHDGDLGFEKGEQLRILE--RNGEWWKAQSLTTGQEGFIPFNFVAK------ 118

Query: 945  GTKLSLMPWFHGKITREQAER-LLCPPET-GLFLVRESTNYPGDYTLCVSCDGK-----V 1103
               L   PWF   ++R+ AER LL P  T G FL+RES +  G ++L V    +     V
Sbjct: 119  ANSLEPEPWFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVV 178

Query: 1104 EHYRIM-YHASKLSIDEEVYFENLMQLVEHYTSDADGLCTRLIKPKLMEGTVAAQDEFFR 1280
            +HY+I         I   + F  L +LV HYT+ +DGLCTRL +P     T   Q  ++ 
Sbjct: 179  KHYKIRNLDKGGFYISPRITFPGLHELVRHYTNSSDGLCTRLSRPC---QTQKPQKPWWE 235

Query: 1281 SGWALNMKDLKLLQTIGKG 1337
              W +  + LKL++ +G G
Sbjct: 236  DEWEVPRETLKLVERLGAG 254



 Score = 46.2 bits (108), Expect(2) = 2e-27
 Identities = 25/50 (50%), Positives = 36/50 (72%), Gaps = 2/50 (4%)
 Frame = +1

Query: 1327 LGRGEFGDVMLGDYRGN-KVAVQCIKNDAPA-QAFLAEASVMNQLRHNNL 1470
            LG G+FG+V +G Y G+ KVAV+ +K  + +  AFLAEA++M QL+H  L
Sbjct: 251  LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRL 300


>ref|XP_543206.2| PREDICTED: similar to Tyrosine-protein kinase BLK (B lymphocyte
            kinase) (p55-BLK) [Canis familiaris].
          Length = 500

 Score = 95.9 bits (237), Expect(2) = 9e-27
 Identities = 67/204 (32%), Positives = 109/204 (53%), Gaps = 14/204 (6%)
 Frame = +3

Query: 768  IAKYNFHGTAEQDLPFCKGDVLTIVAVTKDPNWYKAKNKV-GREGIIPANYVQKREGVKA 944
            +A Y++    ++DL   KG+ L I+    D  W+ A++ + GREG +P+N+V + E    
Sbjct: 59   VALYDYSSVNDRDLQMLKGEKLQILKEAGD--WWWARSLITGREGYVPSNFVTRVE---- 112

Query: 945  GTKLSLMPWFHGKITREQAERLLCPP--ETGLFLVRESTNYPGDYTLCV---SCDGK-VE 1106
               L +  WF   I+R+ AER L  P  + G FL+RES    G ++L V   +  G+ ++
Sbjct: 113  --TLEVEKWFFRSISRKDAERQLLAPVNKAGSFLIRESETNKGAFSLTVKDVTTQGEMIK 170

Query: 1107 HYRIMYHASKLSIDEEVY-------FENLMQLVEHYTSDADGLCTRLIKPKLMEGTVAAQ 1265
            HY+I       S+DE  Y       F  L  LV+HY+   DGLC RL +P +   ++A Q
Sbjct: 171  HYKIR------SLDEGGYYISPRITFPTLQALVQHYSQKGDGLCQRLTQPCV---SLAPQ 221

Query: 1266 DEFFRSGWALNMKDLKLLQTIGKG 1337
            + + +  W +  + LKL++ +G G
Sbjct: 222  NPWAQDEWEIPRQSLKLVRKLGSG 245



 Score = 44.3 bits (103), Expect(2) = 9e-27
 Identities = 23/52 (44%), Positives = 35/52 (67%), Gaps = 2/52 (3%)
 Frame = +1

Query: 1321 RPLGRGEFGDVMLGDYRGN-KVAVQCIKNDAPA-QAFLAEASVMNQLRHNNL 1470
            R LG G+FG+V +G Y+ N KVA++ +K    + +AFL EA++M  L+H  L
Sbjct: 240  RKLGSGQFGEVWMGYYKNNVKVAIKTLKEGTMSPEAFLGEANLMKTLQHERL 291


>ref|XP_865816.1| PREDICTED: similar to Proto-oncogene tyrosine-protein kinase Src
            (p60-Src) (c-Src) isoform 2 [Canis familiaris].
          Length = 568

 Score = 99.8 bits (247), Expect(2) = 1e-26
 Identities = 75/223 (33%), Positives = 106/223 (47%), Gaps = 11/223 (4%)
 Frame = +3

Query: 702  GDARSSEKMSAIQAAWPSG---TECIAKYNFHGTAEQDLPFCKGDVLTIVAVTKDPNWYK 872
            G   SS+ +++ Q A P     T  +A Y++    E DL F KG+ L IV  T+   W  
Sbjct: 65   GGFNSSDTVTSPQRAGPLAGGVTTFVALYDYESRTETDLSFKKGERLQIVNNTEGDWWLA 124

Query: 873  AKNKVGREGIIPANYVQKREGVKAGTKLSLMPWFHGKITREQAERLLCPPET--GLFLVR 1046
                 G+ G IP+NYV   + ++A        W+ GKITR ++ERLL   E   G FLVR
Sbjct: 125  HSLSTGQTGYIPSNYVAPSDSIQA------EEWYFGKITRRESERLLLNAENPRGTFLVR 178

Query: 1047 ESTNYPGDYTLCVS----CDG-KVEHYRI-MYHASKLSIDEEVYFENLMQLVEHYTSDAD 1208
            ES    G Y L VS      G  V+HY+I    +    I     F +L QLV +Y+  AD
Sbjct: 179  ESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFNSLQQLVAYYSKHAD 238

Query: 1209 GLCTRLIKPKLMEGTVAAQDEFFRSGWALNMKDLKLLQTIGKG 1337
            GLC RL    +   +        +  W +  + L+L   +G+G
Sbjct: 239  GLCHRL--TTVCPTSKPQTQGLAKDAWEIPRESLRLEVKLGQG 279



 Score = 40.0 bits (92), Expect(2) = 1e-26
 Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 2/50 (4%)
 Frame = +1

Query: 1327 LGRGEFGDVMLGDYRGN-KVAVQCIKNDAPA-QAFLAEASVMNQLRHNNL 1470
            LG+G FG+V +G + G  +VA++ +K    + +AFL EA VM +LRH  L
Sbjct: 276  LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKL 325


>ref|XP_865870.1| PREDICTED: similar to Proto-oncogene tyrosine-protein kinase Src
            (p60-Src) (c-Src) isoform 5 [Canis familiaris].
          Length = 536

 Score = 99.8 bits (247), Expect(2) = 1e-26
 Identities = 75/223 (33%), Positives = 106/223 (47%), Gaps = 11/223 (4%)
 Frame = +3

Query: 702  GDARSSEKMSAIQAAWPSG---TECIAKYNFHGTAEQDLPFCKGDVLTIVAVTKDPNWYK 872
            G   SS+ +++ Q A P     T  +A Y++    E DL F KG+ L IV  T+   W  
Sbjct: 65   GGFNSSDTVTSPQRAGPLAGGVTTFVALYDYESRTETDLSFKKGERLQIVNNTEGDWWLA 124

Query: 873  AKNKVGREGIIPANYVQKREGVKAGTKLSLMPWFHGKITREQAERLLCPPET--GLFLVR 1046
                 G+ G IP+NYV   + ++A        W+ GKITR ++ERLL   E   G FLVR
Sbjct: 125  HSLSTGQTGYIPSNYVAPSDSIQA------EEWYFGKITRRESERLLLNAENPRGTFLVR 178

Query: 1047 ESTNYPGDYTLCVS----CDG-KVEHYRI-MYHASKLSIDEEVYFENLMQLVEHYTSDAD 1208
            ES    G Y L VS      G  V+HY+I    +    I     F +L QLV +Y+  AD
Sbjct: 179  ESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFNSLQQLVAYYSKHAD 238

Query: 1209 GLCTRLIKPKLMEGTVAAQDEFFRSGWALNMKDLKLLQTIGKG 1337
            GLC RL    +   +        +  W +  + L+L   +G+G
Sbjct: 239  GLCHRL--TTVCPTSKPQTQGLAKDAWEIPRESLRLEVKLGQG 279



 Score = 40.0 bits (92), Expect(2) = 1e-26
 Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 2/50 (4%)
 Frame = +1

Query: 1327 LGRGEFGDVMLGDYRGN-KVAVQCIKNDAPA-QAFLAEASVMNQLRHNNL 1470
            LG+G FG+V +G + G  +VA++ +K    + +AFL EA VM +LRH  L
Sbjct: 276  LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKL 325


>ref|XP_547654.1| PREDICTED: similar to Proto-oncogene tyrosine-protein kinase YES
            (p61-YES) (C-YES) [Canis familiaris].
          Length = 541

 Score = 98.2 bits (243), Expect(2) = 2e-26
 Identities = 69/222 (31%), Positives = 108/222 (48%), Gaps = 14/222 (6%)
 Frame = +3

Query: 714  SSEKMSAIQAAWPSG-----TECIAKYNFHGTAEQDLPFCKGDVLTIVAVTKDPNWYKAK 878
            +S   S + +++P+G     T  +A Y++     +DL F KG+   I+  T+   W    
Sbjct: 72   ASSSFSVVPSSYPAGLTGGVTIFVALYDYEARTTEDLSFKKGERFQIINNTEGDWWEARS 131

Query: 879  NKVGREGIIPANYVQKREGVKAGTKLSLMPWFHGKITREQAERLLCPP--ETGLFLVRES 1052
               G+ G IP+NYV   + ++A        W+ GK+ R+ AERLL  P  + G+FLVRES
Sbjct: 132  IATGKNGYIPSNYVAPADSIQA------EEWYFGKMGRKDAERLLLNPGNQRGIFLVRES 185

Query: 1053 TNYPGDYTLCVS-----CDGKVEHYRI-MYHASKLSIDEEVYFENLMQLVEHYTSDADGL 1214
                G Y+L +          V+HY+I         I     F+ L +LV+HYT  ADGL
Sbjct: 186  ETTKGAYSLSIRDWDEVRGDNVKHYKIRKLDNGGYYITTRAQFDTLQKLVKHYTEHADGL 245

Query: 1215 CTRLIKPKLMEGTVAAQDE-FFRSGWALNMKDLKLLQTIGKG 1337
            C +L     +  TV  Q +   +  W +  + L+L   +G+G
Sbjct: 246  CHKL---TTVCPTVKPQTQGLAKDAWEIPRESLRLEVKLGQG 284



 Score = 40.8 bits (94), Expect(2) = 2e-26
 Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 2/50 (4%)
 Frame = +1

Query: 1327 LGRGEFGDVMLGDYRGN-KVAVQCIK-NDAPAQAFLAEASVMNQLRHNNL 1470
            LG+G FG+V +G + G  KVA++ +K      +AFL EA +M +LRH+ L
Sbjct: 281  LGQGCFGEVWMGTWNGTTKVAIKTLKPGTMMPEAFLQEAQIMKKLRHDKL 330


>ref|XP_542988.2| PREDICTED: similar to Rous sarcoma oncogene isoform 1 [Canis
            familiaris].
          Length = 542

 Score = 96.3 bits (238), Expect(2) = 1e-25
 Identities = 76/229 (33%), Positives = 111/229 (48%), Gaps = 17/229 (7%)
 Frame = +3

Query: 702  GDARSSEKMSAIQAAWPSG---TECIAKYNFHGTAEQDLPFCKGDVLTIVAVTK-----D 857
            G   SS+ +++ Q A P     T  +A Y++    E DL F KG+ L IV  T+     +
Sbjct: 65   GGFNSSDTVTSPQRAGPLAGGVTTFVALYDYESRTETDLSFKKGERLQIVNNTRKVDVRE 124

Query: 858  PNWYKAKN-KVGREGIIPANYVQKREGVKAGTKLSLMPWFHGKITREQAERLLCPPET-- 1028
             +W+ A +   G+ G IP+NYV   + ++A        W+ GKITR ++ERLL   E   
Sbjct: 125  GDWWLAHSLSTGQTGYIPSNYVAPSDSIQAEE------WYFGKITRRESERLLLNAENPR 178

Query: 1029 GLFLVRESTNYPGDYTLCVS----CDG-KVEHYRIM-YHASKLSIDEEVYFENLMQLVEH 1190
            G FLVRES    G Y L VS      G  V+HY+I    +    I     F +L QLV +
Sbjct: 179  GTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFNSLQQLVAY 238

Query: 1191 YTSDADGLCTRLIKPKLMEGTVAAQDEFFRSGWALNMKDLKLLQTIGKG 1337
            Y+  ADGLC RL    +   +        +  W +  + L+L   +G+G
Sbjct: 239  YSKHADGLCHRL--TTVCPTSKPQTQGLAKDAWEIPRESLRLEVKLGQG 285



 Score = 40.0 bits (92), Expect(2) = 1e-25
 Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 2/50 (4%)
 Frame = +1

Query: 1327 LGRGEFGDVMLGDYRGN-KVAVQCIKNDAPA-QAFLAEASVMNQLRHNNL 1470
            LG+G FG+V +G + G  +VA++ +K    + +AFL EA VM +LRH  L
Sbjct: 282  LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKL 331


  Database: RefSeq49_CP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,874,504
  Number of sequences in database:  33,336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 68,094,291
Number of extensions: 2178714
Number of successful extensions: 13932
Number of sequences better than 1.0e-05: 102
Number of HSP's gapped: 13554
Number of HSP's successfully gapped: 129
Length of query: 525
Length of database: 18,874,504
Length adjustment: 107
Effective length of query: 418
Effective length of database: 15,307,552
Effective search space: 6398556736
Effective search space used: 6398556736
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-002939
         (1576 letters)

Database: RefSeq49_HP.fasta 
           32,964 sequences; 18,297,164 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001120662.1| tyrosine-protein kinase CSK [Homo sapiens].       417   e-140
Alignment   gi|NP_004374.1| tyrosine-protein kinase CSK [Homo sapiens].          417   e-140
Alignment   gi|NP_002369.2| megakaryocyte-associated tyrosine-protein kinas...   197   7e-62
Alignment   gi|NP_647612.1| megakaryocyte-associated tyrosine-protein kinas...   197   7e-62
Alignment   gi|NP_647611.1| megakaryocyte-associated tyrosine-protein kinas...   197   7e-62
Alignment   gi|NP_001036236.1| tyrosine-protein kinase Lck precursor [Homo ...    94   6e-27
Alignment   gi|NP_005347.3| tyrosine-protein kinase Lck precursor [Homo sap...    94   6e-27
Alignment   gi|NP_938033.1| proto-oncogene tyrosine-protein kinase Src [Hom...   100   1e-26
Alignment   gi|NP_005408.1| proto-oncogene tyrosine-protein kinase Src [Hom...   100   1e-26
Alignment   gi|NP_005424.1| tyrosine-protein kinase Yes [Homo sapiens].           98   2e-26

>ref|NP_001120662.1| tyrosine-protein kinase CSK [Homo sapiens].
          Length = 450

 Score =  417 bits (1073), Expect(2) = e-140
 Identities = 200/204 (98%), Positives = 203/204 (99%)
 Frame = +3

Query: 726  MSAIQAAWPSGTECIAKYNFHGTAEQDLPFCKGDVLTIVAVTKDPNWYKAKNKVGREGII 905
            MSAIQAAWPSGTECIAKYNFHGTAEQDLPFCKGDVLTIVAVTKDPNWYKAKNKVGREGII
Sbjct: 1    MSAIQAAWPSGTECIAKYNFHGTAEQDLPFCKGDVLTIVAVTKDPNWYKAKNKVGREGII 60

Query: 906  PANYVQKREGVKAGTKLSLMPWFHGKITREQAERLLCPPETGLFLVRESTNYPGDYTLCV 1085
            PANYVQKREGVKAGTKLSLMPWFHGKITREQAERLL PPETGLFLVRESTNYPGDYTLCV
Sbjct: 61   PANYVQKREGVKAGTKLSLMPWFHGKITREQAERLLYPPETGLFLVRESTNYPGDYTLCV 120

Query: 1086 SCDGKVEHYRIMYHASKLSIDEEVYFENLMQLVEHYTSDADGLCTRLIKPKLMEGTVAAQ 1265
            SCDGKVEHYRIMYHASKLSIDEEVYFENLMQLVEHYTSDADGLCTRLIKPK+MEGTVAAQ
Sbjct: 121  SCDGKVEHYRIMYHASKLSIDEEVYFENLMQLVEHYTSDADGLCTRLIKPKVMEGTVAAQ 180

Query: 1266 DEFFRSGWALNMKDLKLLQTIGKG 1337
            DEF+RSGWALNMK+LKLLQTIGKG
Sbjct: 181  DEFYRSGWALNMKELKLLQTIGKG 204



 Score =  101 bits (251), Expect(2) = e-140
 Identities = 56/83 (67%), Positives = 61/83 (73%)
 Frame = +1

Query: 1327 LGRGEFGDVMLGDYRGNKVAVQCIKNDAPAQAFLAEASVMNQLRHNNLGTASGRDR*RTK 1506
            +G+GEFGDVMLGDYRGNKVAV+CIKNDA AQAFLAEASVM QLRH+NL    G      K
Sbjct: 201  IGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIV-EEK 259

Query: 1507 AGSTSSHSPWPRGSLVDYLRSRG 1575
             G         +GSLVDYLRSRG
Sbjct: 260  GGLYIVTEYMAKGSLVDYLRSRG 282


>ref|NP_004374.1| tyrosine-protein kinase CSK [Homo sapiens].
          Length = 450

 Score =  417 bits (1073), Expect(2) = e-140
 Identities = 200/204 (98%), Positives = 203/204 (99%)
 Frame = +3

Query: 726  MSAIQAAWPSGTECIAKYNFHGTAEQDLPFCKGDVLTIVAVTKDPNWYKAKNKVGREGII 905
            MSAIQAAWPSGTECIAKYNFHGTAEQDLPFCKGDVLTIVAVTKDPNWYKAKNKVGREGII
Sbjct: 1    MSAIQAAWPSGTECIAKYNFHGTAEQDLPFCKGDVLTIVAVTKDPNWYKAKNKVGREGII 60

Query: 906  PANYVQKREGVKAGTKLSLMPWFHGKITREQAERLLCPPETGLFLVRESTNYPGDYTLCV 1085
            PANYVQKREGVKAGTKLSLMPWFHGKITREQAERLL PPETGLFLVRESTNYPGDYTLCV
Sbjct: 61   PANYVQKREGVKAGTKLSLMPWFHGKITREQAERLLYPPETGLFLVRESTNYPGDYTLCV 120

Query: 1086 SCDGKVEHYRIMYHASKLSIDEEVYFENLMQLVEHYTSDADGLCTRLIKPKLMEGTVAAQ 1265
            SCDGKVEHYRIMYHASKLSIDEEVYFENLMQLVEHYTSDADGLCTRLIKPK+MEGTVAAQ
Sbjct: 121  SCDGKVEHYRIMYHASKLSIDEEVYFENLMQLVEHYTSDADGLCTRLIKPKVMEGTVAAQ 180

Query: 1266 DEFFRSGWALNMKDLKLLQTIGKG 1337
            DEF+RSGWALNMK+LKLLQTIGKG
Sbjct: 181  DEFYRSGWALNMKELKLLQTIGKG 204



 Score =  101 bits (251), Expect(2) = e-140
 Identities = 56/83 (67%), Positives = 61/83 (73%)
 Frame = +1

Query: 1327 LGRGEFGDVMLGDYRGNKVAVQCIKNDAPAQAFLAEASVMNQLRHNNLGTASGRDR*RTK 1506
            +G+GEFGDVMLGDYRGNKVAV+CIKNDA AQAFLAEASVM QLRH+NL    G      K
Sbjct: 201  IGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIV-EEK 259

Query: 1507 AGSTSSHSPWPRGSLVDYLRSRG 1575
             G         +GSLVDYLRSRG
Sbjct: 260  GGLYIVTEYMAKGSLVDYLRSRG 282


>ref|NP_002369.2| megakaryocyte-associated tyrosine-protein kinase isoform b [Homo
            sapiens].
          Length = 508

 Score =  197 bits (501), Expect(2) = 7e-62
 Identities = 94/198 (47%), Positives = 133/198 (67%), Gaps = 1/198 (0%)
 Frame = +3

Query: 747  WPSGTECIAKYNFHGTAEQDLPFCKGDVLTIVAVTKDPNWYKAKNKV-GREGIIPANYVQ 923
            W  GT+CI K         +L F KGDV+TI+   ++ +WY+ K+   G+EG++ A  ++
Sbjct: 48   WAPGTQCITKCEHTRPKPGELAFRKGDVVTILEACENKSWYRVKHHTSGQEGLLAAGALR 107

Query: 924  KREGVKAGTKLSLMPWFHGKITREQAERLLCPPETGLFLVRESTNYPGDYTLCVSCDGKV 1103
            +RE + A  KLSLMPWFHGKI+ ++A + L PPE GLFLVRES  +PGDY LCVS    V
Sbjct: 108  EREALSADPKLSLMPWFHGKISGQEAVQQLQPPEDGLFLVRESARHPGDYVLCVSFGRDV 167

Query: 1104 EHYRIMYHASKLSIDEEVYFENLMQLVEHYTSDADGLCTRLIKPKLMEGTVAAQDEFFRS 1283
             HYR+++    L+IDE V+F NLM +VEHY+ D   +CT+L++PK   GT +A++E  R+
Sbjct: 168  IHYRVLHRDGHLTIDEAVFFCNLMDMVEHYSKDKGAICTKLVRPKRKHGTKSAEEELARA 227

Query: 1284 GWALNMKDLKLLQTIGKG 1337
            GW LN++ L L   IG+G
Sbjct: 228  GWLLNLQHLTLGAQIGEG 245



 Score = 60.1 bits (144), Expect(2) = 7e-62
 Identities = 36/83 (43%), Positives = 49/83 (59%)
 Frame = +1

Query: 1327 LGRGEFGDVMLGDYRGNKVAVQCIKNDAPAQAFLAEASVMNQLRHNNLGTASGRDR*RTK 1506
            +G GEFG V+ G+Y G KVAV+ IK D  AQAFL E +VM +++H NL    G       
Sbjct: 242  IGEGEFGAVLQGEYLGQKVAVKNIKCDVTAQAFLDETAVMTKMQHENLVRLLGV---ILH 298

Query: 1507 AGSTSSHSPWPRGSLVDYLRSRG 1575
             G         +G+LV++LR+RG
Sbjct: 299  QGLYIVMEHVSKGNLVNFLRTRG 321


>ref|NP_647612.1| megakaryocyte-associated tyrosine-protein kinase isoform a [Homo
            sapiens].
          Length = 507

 Score =  197 bits (501), Expect(2) = 7e-62
 Identities = 94/198 (47%), Positives = 133/198 (67%), Gaps = 1/198 (0%)
 Frame = +3

Query: 747  WPSGTECIAKYNFHGTAEQDLPFCKGDVLTIVAVTKDPNWYKAKNKV-GREGIIPANYVQ 923
            W  GT+CI K         +L F KGDV+TI+   ++ +WY+ K+   G+EG++ A  ++
Sbjct: 47   WAPGTQCITKCEHTRPKPGELAFRKGDVVTILEACENKSWYRVKHHTSGQEGLLAAGALR 106

Query: 924  KREGVKAGTKLSLMPWFHGKITREQAERLLCPPETGLFLVRESTNYPGDYTLCVSCDGKV 1103
            +RE + A  KLSLMPWFHGKI+ ++A + L PPE GLFLVRES  +PGDY LCVS    V
Sbjct: 107  EREALSADPKLSLMPWFHGKISGQEAVQQLQPPEDGLFLVRESARHPGDYVLCVSFGRDV 166

Query: 1104 EHYRIMYHASKLSIDEEVYFENLMQLVEHYTSDADGLCTRLIKPKLMEGTVAAQDEFFRS 1283
             HYR+++    L+IDE V+F NLM +VEHY+ D   +CT+L++PK   GT +A++E  R+
Sbjct: 167  IHYRVLHRDGHLTIDEAVFFCNLMDMVEHYSKDKGAICTKLVRPKRKHGTKSAEEELARA 226

Query: 1284 GWALNMKDLKLLQTIGKG 1337
            GW LN++ L L   IG+G
Sbjct: 227  GWLLNLQHLTLGAQIGEG 244



 Score = 60.1 bits (144), Expect(2) = 7e-62
 Identities = 36/83 (43%), Positives = 49/83 (59%)
 Frame = +1

Query: 1327 LGRGEFGDVMLGDYRGNKVAVQCIKNDAPAQAFLAEASVMNQLRHNNLGTASGRDR*RTK 1506
            +G GEFG V+ G+Y G KVAV+ IK D  AQAFL E +VM +++H NL    G       
Sbjct: 241  IGEGEFGAVLQGEYLGQKVAVKNIKCDVTAQAFLDETAVMTKMQHENLVRLLGV---ILH 297

Query: 1507 AGSTSSHSPWPRGSLVDYLRSRG 1575
             G         +G+LV++LR+RG
Sbjct: 298  QGLYIVMEHVSKGNLVNFLRTRG 320


>ref|NP_647611.1| megakaryocyte-associated tyrosine-protein kinase isoform c [Homo
            sapiens].
          Length = 466

 Score =  197 bits (501), Expect(2) = 7e-62
 Identities = 94/198 (47%), Positives = 133/198 (67%), Gaps = 1/198 (0%)
 Frame = +3

Query: 747  WPSGTECIAKYNFHGTAEQDLPFCKGDVLTIVAVTKDPNWYKAKNKV-GREGIIPANYVQ 923
            W  GT+CI K         +L F KGDV+TI+   ++ +WY+ K+   G+EG++ A  ++
Sbjct: 6    WAPGTQCITKCEHTRPKPGELAFRKGDVVTILEACENKSWYRVKHHTSGQEGLLAAGALR 65

Query: 924  KREGVKAGTKLSLMPWFHGKITREQAERLLCPPETGLFLVRESTNYPGDYTLCVSCDGKV 1103
            +RE + A  KLSLMPWFHGKI+ ++A + L PPE GLFLVRES  +PGDY LCVS    V
Sbjct: 66   EREALSADPKLSLMPWFHGKISGQEAVQQLQPPEDGLFLVRESARHPGDYVLCVSFGRDV 125

Query: 1104 EHYRIMYHASKLSIDEEVYFENLMQLVEHYTSDADGLCTRLIKPKLMEGTVAAQDEFFRS 1283
             HYR+++    L+IDE V+F NLM +VEHY+ D   +CT+L++PK   GT +A++E  R+
Sbjct: 126  IHYRVLHRDGHLTIDEAVFFCNLMDMVEHYSKDKGAICTKLVRPKRKHGTKSAEEELARA 185

Query: 1284 GWALNMKDLKLLQTIGKG 1337
            GW LN++ L L   IG+G
Sbjct: 186  GWLLNLQHLTLGAQIGEG 203



 Score = 60.1 bits (144), Expect(2) = 7e-62
 Identities = 36/83 (43%), Positives = 49/83 (59%)
 Frame = +1

Query: 1327 LGRGEFGDVMLGDYRGNKVAVQCIKNDAPAQAFLAEASVMNQLRHNNLGTASGRDR*RTK 1506
            +G GEFG V+ G+Y G KVAV+ IK D  AQAFL E +VM +++H NL    G       
Sbjct: 200  IGEGEFGAVLQGEYLGQKVAVKNIKCDVTAQAFLDETAVMTKMQHENLVRLLGV---ILH 256

Query: 1507 AGSTSSHSPWPRGSLVDYLRSRG 1575
             G         +G+LV++LR+RG
Sbjct: 257  QGLYIVMEHVSKGNLVNFLRTRG 279


>ref|NP_001036236.1| tyrosine-protein kinase Lck precursor [Homo sapiens].
          Length = 509

 Score = 94.4 bits (233), Expect(2) = 6e-27
 Identities = 69/199 (34%), Positives = 105/199 (52%), Gaps = 9/199 (4%)
 Frame = +3

Query: 768  IAKYNFHGTAEQDLPFCKGDVLTIVAVTKDPNWYKAKN-KVGREGIIPANYVQKREGVKA 944
            IA +++  + + DL F KG+ L I+  + +  W+KA++   G+EG IP N+V K      
Sbjct: 67   IALHSYEPSHDGDLGFEKGEQLRILEQSGE--WWKAQSLTTGQEGFIPFNFVAK------ 118

Query: 945  GTKLSLMPWFHGKITREQAER-LLCPPET-GLFLVRESTNYPGDYTLCVSCDGK-----V 1103
               L   PWF   ++R+ AER LL P  T G FL+RES +  G ++L V    +     V
Sbjct: 119  ANSLEPEPWFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVV 178

Query: 1104 EHYRIM-YHASKLSIDEEVYFENLMQLVEHYTSDADGLCTRLIKPKLMEGTVAAQDEFFR 1280
            +HY+I         I   + F  L +LV HYT+ +DGLCTRL +P     T   Q  ++ 
Sbjct: 179  KHYKIRNLDNGGFYISPRITFPGLHELVRHYTNASDGLCTRLSRPC---QTQKPQKPWWE 235

Query: 1281 SGWALNMKDLKLLQTIGKG 1337
              W +  + LKL++ +G G
Sbjct: 236  DEWEVPRETLKLVERLGAG 254



 Score = 46.2 bits (108), Expect(2) = 6e-27
 Identities = 25/50 (50%), Positives = 36/50 (72%), Gaps = 2/50 (4%)
 Frame = +1

Query: 1327 LGRGEFGDVMLGDYRGN-KVAVQCIKNDAPA-QAFLAEASVMNQLRHNNL 1470
            LG G+FG+V +G Y G+ KVAV+ +K  + +  AFLAEA++M QL+H  L
Sbjct: 251  LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRL 300


>ref|NP_005347.3| tyrosine-protein kinase Lck precursor [Homo sapiens].
          Length = 509

 Score = 94.4 bits (233), Expect(2) = 6e-27
 Identities = 69/199 (34%), Positives = 105/199 (52%), Gaps = 9/199 (4%)
 Frame = +3

Query: 768  IAKYNFHGTAEQDLPFCKGDVLTIVAVTKDPNWYKAKN-KVGREGIIPANYVQKREGVKA 944
            IA +++  + + DL F KG+ L I+  + +  W+KA++   G+EG IP N+V K      
Sbjct: 67   IALHSYEPSHDGDLGFEKGEQLRILEQSGE--WWKAQSLTTGQEGFIPFNFVAK------ 118

Query: 945  GTKLSLMPWFHGKITREQAER-LLCPPET-GLFLVRESTNYPGDYTLCVSCDGK-----V 1103
               L   PWF   ++R+ AER LL P  T G FL+RES +  G ++L V    +     V
Sbjct: 119  ANSLEPEPWFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVV 178

Query: 1104 EHYRIM-YHASKLSIDEEVYFENLMQLVEHYTSDADGLCTRLIKPKLMEGTVAAQDEFFR 1280
            +HY+I         I   + F  L +LV HYT+ +DGLCTRL +P     T   Q  ++ 
Sbjct: 179  KHYKIRNLDNGGFYISPRITFPGLHELVRHYTNASDGLCTRLSRPC---QTQKPQKPWWE 235

Query: 1281 SGWALNMKDLKLLQTIGKG 1337
              W +  + LKL++ +G G
Sbjct: 236  DEWEVPRETLKLVERLGAG 254



 Score = 46.2 bits (108), Expect(2) = 6e-27
 Identities = 25/50 (50%), Positives = 36/50 (72%), Gaps = 2/50 (4%)
 Frame = +1

Query: 1327 LGRGEFGDVMLGDYRGN-KVAVQCIKNDAPA-QAFLAEASVMNQLRHNNL 1470
            LG G+FG+V +G Y G+ KVAV+ +K  + +  AFLAEA++M QL+H  L
Sbjct: 251  LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRL 300


>ref|NP_938033.1| proto-oncogene tyrosine-protein kinase Src [Homo sapiens].
          Length = 536

 Score = 99.8 bits (247), Expect(2) = 1e-26
 Identities = 75/223 (33%), Positives = 106/223 (47%), Gaps = 11/223 (4%)
 Frame = +3

Query: 702  GDARSSEKMSAIQAAWPSG---TECIAKYNFHGTAEQDLPFCKGDVLTIVAVTKDPNWYK 872
            G   SS+ +++ Q A P     T  +A Y++    E DL F KG+ L IV  T+   W  
Sbjct: 65   GGFNSSDTVTSPQRAGPLAGGVTTFVALYDYESRTETDLSFKKGERLQIVNNTEGDWWLA 124

Query: 873  AKNKVGREGIIPANYVQKREGVKAGTKLSLMPWFHGKITREQAERLLCPPET--GLFLVR 1046
                 G+ G IP+NYV   + ++A        W+ GKITR ++ERLL   E   G FLVR
Sbjct: 125  HSLSTGQTGYIPSNYVAPSDSIQA------EEWYFGKITRRESERLLLNAENPRGTFLVR 178

Query: 1047 ESTNYPGDYTLCVS----CDG-KVEHYRI-MYHASKLSIDEEVYFENLMQLVEHYTSDAD 1208
            ES    G Y L VS      G  V+HY+I    +    I     F +L QLV +Y+  AD
Sbjct: 179  ESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFNSLQQLVAYYSKHAD 238

Query: 1209 GLCTRLIKPKLMEGTVAAQDEFFRSGWALNMKDLKLLQTIGKG 1337
            GLC RL    +   +        +  W +  + L+L   +G+G
Sbjct: 239  GLCHRL--TTVCPTSKPQTQGLAKDAWEIPRESLRLEVKLGQG 279



 Score = 40.0 bits (92), Expect(2) = 1e-26
 Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 2/50 (4%)
 Frame = +1

Query: 1327 LGRGEFGDVMLGDYRGN-KVAVQCIKNDAPA-QAFLAEASVMNQLRHNNL 1470
            LG+G FG+V +G + G  +VA++ +K    + +AFL EA VM +LRH  L
Sbjct: 276  LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKL 325


>ref|NP_005408.1| proto-oncogene tyrosine-protein kinase Src [Homo sapiens].
          Length = 536

 Score = 99.8 bits (247), Expect(2) = 1e-26
 Identities = 75/223 (33%), Positives = 106/223 (47%), Gaps = 11/223 (4%)
 Frame = +3

Query: 702  GDARSSEKMSAIQAAWPSG---TECIAKYNFHGTAEQDLPFCKGDVLTIVAVTKDPNWYK 872
            G   SS+ +++ Q A P     T  +A Y++    E DL F KG+ L IV  T+   W  
Sbjct: 65   GGFNSSDTVTSPQRAGPLAGGVTTFVALYDYESRTETDLSFKKGERLQIVNNTEGDWWLA 124

Query: 873  AKNKVGREGIIPANYVQKREGVKAGTKLSLMPWFHGKITREQAERLLCPPET--GLFLVR 1046
                 G+ G IP+NYV   + ++A        W+ GKITR ++ERLL   E   G FLVR
Sbjct: 125  HSLSTGQTGYIPSNYVAPSDSIQA------EEWYFGKITRRESERLLLNAENPRGTFLVR 178

Query: 1047 ESTNYPGDYTLCVS----CDG-KVEHYRI-MYHASKLSIDEEVYFENLMQLVEHYTSDAD 1208
            ES    G Y L VS      G  V+HY+I    +    I     F +L QLV +Y+  AD
Sbjct: 179  ESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFNSLQQLVAYYSKHAD 238

Query: 1209 GLCTRLIKPKLMEGTVAAQDEFFRSGWALNMKDLKLLQTIGKG 1337
            GLC RL    +   +        +  W +  + L+L   +G+G
Sbjct: 239  GLCHRL--TTVCPTSKPQTQGLAKDAWEIPRESLRLEVKLGQG 279



 Score = 40.0 bits (92), Expect(2) = 1e-26
 Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 2/50 (4%)
 Frame = +1

Query: 1327 LGRGEFGDVMLGDYRGN-KVAVQCIKNDAPA-QAFLAEASVMNQLRHNNL 1470
            LG+G FG+V +G + G  +VA++ +K    + +AFL EA VM +LRH  L
Sbjct: 276  LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKL 325


>ref|NP_005424.1| tyrosine-protein kinase Yes [Homo sapiens].
          Length = 543

 Score = 98.2 bits (243), Expect(2) = 2e-26
 Identities = 69/222 (31%), Positives = 108/222 (48%), Gaps = 14/222 (6%)
 Frame = +3

Query: 714  SSEKMSAIQAAWPSG-----TECIAKYNFHGTAEQDLPFCKGDVLTIVAVTKDPNWYKAK 878
            +S   S + +++P+G     T  +A Y++     +DL F KG+   I+  T+   W    
Sbjct: 74   ASSSFSVVPSSYPAGLTGGVTIFVALYDYEARTTEDLSFKKGERFQIINNTEGDWWEARS 133

Query: 879  NKVGREGIIPANYVQKREGVKAGTKLSLMPWFHGKITREQAERLLCPP--ETGLFLVRES 1052
               G+ G IP+NYV   + ++A        W+ GK+ R+ AERLL  P  + G+FLVRES
Sbjct: 134  IATGKNGYIPSNYVAPADSIQA------EEWYFGKMGRKDAERLLLNPGNQRGIFLVRES 187

Query: 1053 TNYPGDYTLCVS-----CDGKVEHYRI-MYHASKLSIDEEVYFENLMQLVEHYTSDADGL 1214
                G Y+L +          V+HY+I         I     F+ L +LV+HYT  ADGL
Sbjct: 188  ETTKGAYSLSIRDWDEIRGDNVKHYKIRKLDNGGYYITTRAQFDTLQKLVKHYTEHADGL 247

Query: 1215 CTRLIKPKLMEGTVAAQDE-FFRSGWALNMKDLKLLQTIGKG 1337
            C +L     +  TV  Q +   +  W +  + L+L   +G+G
Sbjct: 248  CHKL---TTVCPTVKPQTQGLAKDAWEIPRESLRLEVKLGQG 286



 Score = 40.8 bits (94), Expect(2) = 2e-26
 Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 2/50 (4%)
 Frame = +1

Query: 1327 LGRGEFGDVMLGDYRGN-KVAVQCIK-NDAPAQAFLAEASVMNQLRHNNL 1470
            LG+G FG+V +G + G  KVA++ +K      +AFL EA +M +LRH+ L
Sbjct: 283  LGQGCFGEVWMGTWNGTTKVAIKTLKPGTMMPEAFLQEAQIMKKLRHDKL 332


  Database: RefSeq49_HP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,297,164
  Number of sequences in database:  32,964
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 66,344,586
Number of extensions: 2091339
Number of successful extensions: 12329
Number of sequences better than 1.0e-05: 107
Number of HSP's gapped: 12017
Number of HSP's successfully gapped: 139
Length of query: 525
Length of database: 18,297,164
Length adjustment: 107
Effective length of query: 418
Effective length of database: 14,770,016
Effective search space: 6173866688
Effective search space used: 6173866688
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-002939
         (1576 letters)

Database: RefSeq49_MP.fasta 
           30,036 sequences; 15,617,559 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_031809.2| tyrosine-protein kinase CSK [Mus musculus].          415   e-139
Alignment   gi|NP_034898.1| megakaryocyte-associated tyrosine-protein kinas...   190   7e-60
Alignment   gi|NP_001020566.1| neuronal proto-oncogene tyrosine-protein kin...   100   5e-27
Alignment   gi|NP_001192062.1| tyrosine-protein kinase Yes [Mus musculus].        98   2e-26
Alignment   gi|NP_001192061.1| tyrosine-protein kinase Yes [Mus musculus].        98   2e-26
Alignment   gi|NP_033561.1| tyrosine-protein kinase Yes [Mus musculus].           98   2e-26
Alignment   gi|NP_001155904.1| proto-oncogene tyrosine-protein kinase LCK i...    92   3e-26
Alignment   gi|NP_001155905.1| proto-oncogene tyrosine-protein kinase LCK i...    92   3e-26
Alignment   gi|NP_034823.1| proto-oncogene tyrosine-protein kinase LCK isof...    92   3e-26
Alignment   gi|NP_033297.2| neuronal proto-oncogene tyrosine-protein kinase...    97   6e-26

>ref|NP_031809.2| tyrosine-protein kinase CSK [Mus musculus].
          Length = 450

 Score =  415 bits (1066), Expect(2) = e-139
 Identities = 198/204 (97%), Positives = 203/204 (99%)
 Frame = +3

Query: 726  MSAIQAAWPSGTECIAKYNFHGTAEQDLPFCKGDVLTIVAVTKDPNWYKAKNKVGREGII 905
            MSAIQAAWPSGTECIAKYNFHGTAEQDLPFCKGDVLTIVAVTKDPNWYKAKNKVGREGII
Sbjct: 1    MSAIQAAWPSGTECIAKYNFHGTAEQDLPFCKGDVLTIVAVTKDPNWYKAKNKVGREGII 60

Query: 906  PANYVQKREGVKAGTKLSLMPWFHGKITREQAERLLCPPETGLFLVRESTNYPGDYTLCV 1085
            PANYVQKREGVKAGTKLSLMPWFHGKITREQAERLL PPETGLFLVRESTNYPGDYTLCV
Sbjct: 61   PANYVQKREGVKAGTKLSLMPWFHGKITREQAERLLYPPETGLFLVRESTNYPGDYTLCV 120

Query: 1086 SCDGKVEHYRIMYHASKLSIDEEVYFENLMQLVEHYTSDADGLCTRLIKPKLMEGTVAAQ 1265
            SC+GKVEHYRIMYHASKLSIDEEVYFENLMQLVEHYT+DADGLCTRLIKPK+MEGTVAAQ
Sbjct: 121  SCEGKVEHYRIMYHASKLSIDEEVYFENLMQLVEHYTTDADGLCTRLIKPKVMEGTVAAQ 180

Query: 1266 DEFFRSGWALNMKDLKLLQTIGKG 1337
            DEF+RSGWALNMK+LKLLQTIGKG
Sbjct: 181  DEFYRSGWALNMKELKLLQTIGKG 204



 Score =  101 bits (251), Expect(2) = e-139
 Identities = 56/83 (67%), Positives = 61/83 (73%)
 Frame = +1

Query: 1327 LGRGEFGDVMLGDYRGNKVAVQCIKNDAPAQAFLAEASVMNQLRHNNLGTASGRDR*RTK 1506
            +G+GEFGDVMLGDYRGNKVAV+CIKNDA AQAFLAEASVM QLRH+NL    G      K
Sbjct: 201  IGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIV-EEK 259

Query: 1507 AGSTSSHSPWPRGSLVDYLRSRG 1575
             G         +GSLVDYLRSRG
Sbjct: 260  GGLYIVTEYMAKGSLVDYLRSRG 282


>ref|NP_034898.1| megakaryocyte-associated tyrosine-protein kinase [Mus musculus].
          Length = 505

 Score =  190 bits (482), Expect(2) = 7e-60
 Identities = 91/198 (45%), Positives = 132/198 (66%), Gaps = 1/198 (0%)
 Frame = +3

Query: 747  WPSGTECIAKYNFHGTAEQDLPFCKGDVLTIVAVTKDPNWYKAKNK-VGREGIIPANYVQ 923
            W  GT+C+ K         +L F KGD++TI+   +D +WY+AK+   G+EG++ A  ++
Sbjct: 45   WAPGTQCMTKCENSRPKPGELAFRKGDMVTILEACEDKSWYRAKHHGSGQEGLLAAAALR 104

Query: 924  KREGVKAGTKLSLMPWFHGKITREQAERLLCPPETGLFLVRESTNYPGDYTLCVSCDGKV 1103
            +RE +    KLSLMPWFHGKI+ ++A + L PPE GLFLVRES  +PGDY LCVS    V
Sbjct: 105  QREALSTDPKLSLMPWFHGKISGQEAIQQLQPPEDGLFLVRESARHPGDYVLCVSFGRDV 164

Query: 1104 EHYRIMYHASKLSIDEEVYFENLMQLVEHYTSDADGLCTRLIKPKLMEGTVAAQDEFFRS 1283
             HYR+++    L+IDE V F NLM +VEHYT D   +CT+L+KP+  +G  +A++E  ++
Sbjct: 165  IHYRVLHRDGHLTIDEAVCFCNLMDMVEHYTKDKGAICTKLVKPRRKQGAKSAEEELAKA 224

Query: 1284 GWALNMKDLKLLQTIGKG 1337
            GW L+++ L L   IG+G
Sbjct: 225  GWLLDLQHLTLGAQIGEG 242



 Score = 60.5 bits (145), Expect(2) = 7e-60
 Identities = 37/83 (44%), Positives = 49/83 (59%)
 Frame = +1

Query: 1327 LGRGEFGDVMLGDYRGNKVAVQCIKNDAPAQAFLAEASVMNQLRHNNLGTASGRDR*RTK 1506
            +G GEFG V+ G+Y G KVAV+ IK D  AQAFL E +VM +L+H NL    G       
Sbjct: 239  IGEGEFGAVLQGEYLGQKVAVKNIKCDVTAQAFLDETAVMTKLQHRNLVRLLGV---ILH 295

Query: 1507 AGSTSSHSPWPRGSLVDYLRSRG 1575
             G         +G+LV++LR+RG
Sbjct: 296  HGLYIVMEHVSKGNLVNFLRTRG 318


>ref|NP_001020566.1| neuronal proto-oncogene tyrosine-protein kinase Src isoform 2 [Mus
            musculus].
          Length = 535

 Score =  100 bits (249), Expect(2) = 5e-27
 Identities = 79/244 (32%), Positives = 113/244 (46%), Gaps = 11/244 (4%)
 Frame = +3

Query: 639  GPQCPEKALMVPSDRSAFL*HGDARSSEKMSAIQAAWPSG---TECIAKYNFHGTAEQDL 809
            G + P  A + P+        G   SS+ +++ Q A P     T  +A Y++    E DL
Sbjct: 45   GHRGPSAAFVPPAAEPKLF--GGFNSSDTVTSPQRAGPLAGGVTTFVALYDYESRTETDL 102

Query: 810  PFCKGDVLTIVAVTKDPNWYKAKNKVGREGIIPANYVQKREGVKAGTKLSLMPWFHGKIT 989
             F KG+ L IV  T+   W       G+ G IP+NYV   + ++A        W+ GKIT
Sbjct: 103  SFKKGERLQIVNNTEGDWWLAHSLSTGQTGYIPSNYVAPSDSIQA------EEWYFGKIT 156

Query: 990  REQAERLLCPPET--GLFLVRESTNYPGDYTLCVS----CDG-KVEHYRI-MYHASKLSI 1145
            R ++ERLL   E   G FLVRES    G Y L VS      G  V+HY+I    +    I
Sbjct: 157  RRESERLLLNAENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYI 216

Query: 1146 DEEVYFENLMQLVEHYTSDADGLCTRLIKPKLMEGTVAAQDEFFRSGWALNMKDLKLLQT 1325
                 F +L QLV +Y+  ADGLC RL    +   +        +  W +  + L+L   
Sbjct: 217  TSRTQFNSLQQLVAYYSKHADGLCHRL--TTVCPTSKPQTQGLAKDAWEIPRESLRLEVK 274

Query: 1326 IGKG 1337
            +G+G
Sbjct: 275  LGQG 278



 Score = 40.0 bits (92), Expect(2) = 5e-27
 Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 2/50 (4%)
 Frame = +1

Query: 1327 LGRGEFGDVMLGDYRGN-KVAVQCIKNDAPA-QAFLAEASVMNQLRHNNL 1470
            LG+G FG+V +G + G  +VA++ +K    + +AFL EA VM +LRH  L
Sbjct: 275  LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKL 324


>ref|NP_001192062.1| tyrosine-protein kinase Yes [Mus musculus].
          Length = 541

 Score = 98.2 bits (243), Expect(2) = 2e-26
 Identities = 69/222 (31%), Positives = 108/222 (48%), Gaps = 14/222 (6%)
 Frame = +3

Query: 714  SSEKMSAIQAAWPSG-----TECIAKYNFHGTAEQDLPFCKGDVLTIVAVTKDPNWYKAK 878
            +S   S + +++P+G     T  +A Y++     +DL F KG+   I+  T+   W    
Sbjct: 72   ASSSFSVVSSSYPTGLTGGVTIFVALYDYEARTTEDLSFKKGERFQIINNTEGDWWEARS 131

Query: 879  NKVGREGIIPANYVQKREGVKAGTKLSLMPWFHGKITREQAERLLCPP--ETGLFLVRES 1052
               G+ G IP+NYV   + ++A        W+ GK+ R+ AERLL  P  + G+FLVRES
Sbjct: 132  IATGKSGYIPSNYVVPADSIQA------EEWYFGKMGRKDAERLLLNPGNQRGIFLVRES 185

Query: 1053 TNYPGDYTLCVS-----CDGKVEHYRI-MYHASKLSIDEEVYFENLMQLVEHYTSDADGL 1214
                G Y+L +          V+HY+I         I     F+ L +LV+HYT  ADGL
Sbjct: 186  ETTKGAYSLSIRDWDEVRGDNVKHYKIRKLDNGGYYITTRAQFDTLQKLVKHYTEHADGL 245

Query: 1215 CTRLIKPKLMEGTVAAQDE-FFRSGWALNMKDLKLLQTIGKG 1337
            C +L     +  TV  Q +   +  W +  + L+L   +G+G
Sbjct: 246  CHKL---TTVCPTVKPQTQGLAKDAWEIPRESLRLEVKLGQG 284



 Score = 40.8 bits (94), Expect(2) = 2e-26
 Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 2/50 (4%)
 Frame = +1

Query: 1327 LGRGEFGDVMLGDYRGN-KVAVQCIK-NDAPAQAFLAEASVMNQLRHNNL 1470
            LG+G FG+V +G + G  KVA++ +K      +AFL EA +M +LRH+ L
Sbjct: 281  LGQGCFGEVWMGTWNGTTKVAIKTLKPGTMMPEAFLQEAQIMKKLRHDKL 330


>ref|NP_001192061.1| tyrosine-protein kinase Yes [Mus musculus].
          Length = 541

 Score = 98.2 bits (243), Expect(2) = 2e-26
 Identities = 69/222 (31%), Positives = 108/222 (48%), Gaps = 14/222 (6%)
 Frame = +3

Query: 714  SSEKMSAIQAAWPSG-----TECIAKYNFHGTAEQDLPFCKGDVLTIVAVTKDPNWYKAK 878
            +S   S + +++P+G     T  +A Y++     +DL F KG+   I+  T+   W    
Sbjct: 72   ASSSFSVVSSSYPTGLTGGVTIFVALYDYEARTTEDLSFKKGERFQIINNTEGDWWEARS 131

Query: 879  NKVGREGIIPANYVQKREGVKAGTKLSLMPWFHGKITREQAERLLCPP--ETGLFLVRES 1052
               G+ G IP+NYV   + ++A        W+ GK+ R+ AERLL  P  + G+FLVRES
Sbjct: 132  IATGKSGYIPSNYVVPADSIQA------EEWYFGKMGRKDAERLLLNPGNQRGIFLVRES 185

Query: 1053 TNYPGDYTLCVS-----CDGKVEHYRI-MYHASKLSIDEEVYFENLMQLVEHYTSDADGL 1214
                G Y+L +          V+HY+I         I     F+ L +LV+HYT  ADGL
Sbjct: 186  ETTKGAYSLSIRDWDEVRGDNVKHYKIRKLDNGGYYITTRAQFDTLQKLVKHYTEHADGL 245

Query: 1215 CTRLIKPKLMEGTVAAQDE-FFRSGWALNMKDLKLLQTIGKG 1337
            C +L     +  TV  Q +   +  W +  + L+L   +G+G
Sbjct: 246  CHKL---TTVCPTVKPQTQGLAKDAWEIPRESLRLEVKLGQG 284



 Score = 40.8 bits (94), Expect(2) = 2e-26
 Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 2/50 (4%)
 Frame = +1

Query: 1327 LGRGEFGDVMLGDYRGN-KVAVQCIK-NDAPAQAFLAEASVMNQLRHNNL 1470
            LG+G FG+V +G + G  KVA++ +K      +AFL EA +M +LRH+ L
Sbjct: 281  LGQGCFGEVWMGTWNGTTKVAIKTLKPGTMMPEAFLQEAQIMKKLRHDKL 330


>ref|NP_033561.1| tyrosine-protein kinase Yes [Mus musculus].
          Length = 541

 Score = 98.2 bits (243), Expect(2) = 2e-26
 Identities = 69/222 (31%), Positives = 108/222 (48%), Gaps = 14/222 (6%)
 Frame = +3

Query: 714  SSEKMSAIQAAWPSG-----TECIAKYNFHGTAEQDLPFCKGDVLTIVAVTKDPNWYKAK 878
            +S   S + +++P+G     T  +A Y++     +DL F KG+   I+  T+   W    
Sbjct: 72   ASSSFSVVSSSYPTGLTGGVTIFVALYDYEARTTEDLSFKKGERFQIINNTEGDWWEARS 131

Query: 879  NKVGREGIIPANYVQKREGVKAGTKLSLMPWFHGKITREQAERLLCPP--ETGLFLVRES 1052
               G+ G IP+NYV   + ++A        W+ GK+ R+ AERLL  P  + G+FLVRES
Sbjct: 132  IATGKSGYIPSNYVVPADSIQA------EEWYFGKMGRKDAERLLLNPGNQRGIFLVRES 185

Query: 1053 TNYPGDYTLCVS-----CDGKVEHYRI-MYHASKLSIDEEVYFENLMQLVEHYTSDADGL 1214
                G Y+L +          V+HY+I         I     F+ L +LV+HYT  ADGL
Sbjct: 186  ETTKGAYSLSIRDWDEVRGDNVKHYKIRKLDNGGYYITTRAQFDTLQKLVKHYTEHADGL 245

Query: 1215 CTRLIKPKLMEGTVAAQDE-FFRSGWALNMKDLKLLQTIGKG 1337
            C +L     +  TV  Q +   +  W +  + L+L   +G+G
Sbjct: 246  CHKL---TTVCPTVKPQTQGLAKDAWEIPRESLRLEVKLGQG 284



 Score = 40.8 bits (94), Expect(2) = 2e-26
 Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 2/50 (4%)
 Frame = +1

Query: 1327 LGRGEFGDVMLGDYRGN-KVAVQCIK-NDAPAQAFLAEASVMNQLRHNNL 1470
            LG+G FG+V +G + G  KVA++ +K      +AFL EA +M +LRH+ L
Sbjct: 281  LGQGCFGEVWMGTWNGTTKVAIKTLKPGTMMPEAFLQEAQIMKKLRHDKL 330


>ref|NP_001155904.1| proto-oncogene tyrosine-protein kinase LCK isoform a [Mus musculus].
          Length = 520

 Score = 92.4 bits (228), Expect(2) = 3e-26
 Identities = 68/199 (34%), Positives = 104/199 (52%), Gaps = 9/199 (4%)
 Frame = +3

Query: 768  IAKYNFHGTAEQDLPFCKGDVLTIVAVTKDPNWYKAKN-KVGREGIIPANYVQKREGVKA 944
            IA +++  + + DL F KG+ L I+  + +  W+KA++   G+EG IP N+V K      
Sbjct: 78   IALHSYEPSHDGDLGFEKGEQLRILEQSGE--WWKAQSLTTGQEGFIPFNFVAK------ 129

Query: 945  GTKLSLMPWFHGKITREQAER-LLCPPET-GLFLVRESTNYPGDYTLCVSCDGK-----V 1103
               L   PWF   ++R+ AER LL P  T G FL+RES +  G ++L V    +     V
Sbjct: 130  ANSLEPEPWFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVV 189

Query: 1104 EHYRIM-YHASKLSIDEEVYFENLMQLVEHYTSDADGLCTRLIKPKLMEGTVAAQDEFFR 1280
            +HY+I         I   + F  L  LV HYT+ +DGLCT+L +P     T   Q  ++ 
Sbjct: 190  KHYKIRNLDNGGFYISPRITFPGLHDLVRHYTNASDGLCTKLSRPC---QTQKPQKPWWE 246

Query: 1281 SGWALNMKDLKLLQTIGKG 1337
              W +  + LKL++ +G G
Sbjct: 247  DEWEVPRETLKLVERLGAG 265



 Score = 45.4 bits (106), Expect(2) = 3e-26
 Identities = 25/50 (50%), Positives = 36/50 (72%), Gaps = 2/50 (4%)
 Frame = +1

Query: 1327 LGRGEFGDVMLGDYRGN-KVAVQCIKNDAPA-QAFLAEASVMNQLRHNNL 1470
            LG G+FG+V +G Y G+ KVAV+ +K  + +  AFLAEA++M QL+H  L
Sbjct: 262  LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHPRL 311


>ref|NP_001155905.1| proto-oncogene tyrosine-protein kinase LCK isoform b [Mus musculus].
          Length = 509

 Score = 92.4 bits (228), Expect(2) = 3e-26
 Identities = 68/199 (34%), Positives = 104/199 (52%), Gaps = 9/199 (4%)
 Frame = +3

Query: 768  IAKYNFHGTAEQDLPFCKGDVLTIVAVTKDPNWYKAKN-KVGREGIIPANYVQKREGVKA 944
            IA +++  + + DL F KG+ L I+  + +  W+KA++   G+EG IP N+V K      
Sbjct: 67   IALHSYEPSHDGDLGFEKGEQLRILEQSGE--WWKAQSLTTGQEGFIPFNFVAK------ 118

Query: 945  GTKLSLMPWFHGKITREQAER-LLCPPET-GLFLVRESTNYPGDYTLCVSCDGK-----V 1103
               L   PWF   ++R+ AER LL P  T G FL+RES +  G ++L V    +     V
Sbjct: 119  ANSLEPEPWFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVV 178

Query: 1104 EHYRIM-YHASKLSIDEEVYFENLMQLVEHYTSDADGLCTRLIKPKLMEGTVAAQDEFFR 1280
            +HY+I         I   + F  L  LV HYT+ +DGLCT+L +P     T   Q  ++ 
Sbjct: 179  KHYKIRNLDNGGFYISPRITFPGLHDLVRHYTNASDGLCTKLSRPC---QTQKPQKPWWE 235

Query: 1281 SGWALNMKDLKLLQTIGKG 1337
              W +  + LKL++ +G G
Sbjct: 236  DEWEVPRETLKLVERLGAG 254



 Score = 45.4 bits (106), Expect(2) = 3e-26
 Identities = 25/50 (50%), Positives = 36/50 (72%), Gaps = 2/50 (4%)
 Frame = +1

Query: 1327 LGRGEFGDVMLGDYRGN-KVAVQCIKNDAPA-QAFLAEASVMNQLRHNNL 1470
            LG G+FG+V +G Y G+ KVAV+ +K  + +  AFLAEA++M QL+H  L
Sbjct: 251  LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHPRL 300


>ref|NP_034823.1| proto-oncogene tyrosine-protein kinase LCK isoform b [Mus musculus].
          Length = 509

 Score = 92.4 bits (228), Expect(2) = 3e-26
 Identities = 68/199 (34%), Positives = 104/199 (52%), Gaps = 9/199 (4%)
 Frame = +3

Query: 768  IAKYNFHGTAEQDLPFCKGDVLTIVAVTKDPNWYKAKN-KVGREGIIPANYVQKREGVKA 944
            IA +++  + + DL F KG+ L I+  + +  W+KA++   G+EG IP N+V K      
Sbjct: 67   IALHSYEPSHDGDLGFEKGEQLRILEQSGE--WWKAQSLTTGQEGFIPFNFVAK------ 118

Query: 945  GTKLSLMPWFHGKITREQAER-LLCPPET-GLFLVRESTNYPGDYTLCVSCDGK-----V 1103
               L   PWF   ++R+ AER LL P  T G FL+RES +  G ++L V    +     V
Sbjct: 119  ANSLEPEPWFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVV 178

Query: 1104 EHYRIM-YHASKLSIDEEVYFENLMQLVEHYTSDADGLCTRLIKPKLMEGTVAAQDEFFR 1280
            +HY+I         I   + F  L  LV HYT+ +DGLCT+L +P     T   Q  ++ 
Sbjct: 179  KHYKIRNLDNGGFYISPRITFPGLHDLVRHYTNASDGLCTKLSRPC---QTQKPQKPWWE 235

Query: 1281 SGWALNMKDLKLLQTIGKG 1337
              W +  + LKL++ +G G
Sbjct: 236  DEWEVPRETLKLVERLGAG 254



 Score = 45.4 bits (106), Expect(2) = 3e-26
 Identities = 25/50 (50%), Positives = 36/50 (72%), Gaps = 2/50 (4%)
 Frame = +1

Query: 1327 LGRGEFGDVMLGDYRGN-KVAVQCIKNDAPA-QAFLAEASVMNQLRHNNL 1470
            LG G+FG+V +G Y G+ KVAV+ +K  + +  AFLAEA++M QL+H  L
Sbjct: 251  LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHPRL 300


>ref|NP_033297.2| neuronal proto-oncogene tyrosine-protein kinase Src isoform 1 [Mus
            musculus].
          Length = 541

 Score = 97.1 bits (240), Expect(2) = 6e-26
 Identities = 80/250 (32%), Positives = 118/250 (47%), Gaps = 17/250 (6%)
 Frame = +3

Query: 639  GPQCPEKALMVPSDRSAFL*HGDARSSEKMSAIQAAWPSG---TECIAKYNFHGTAEQDL 809
            G + P  A + P+        G   SS+ +++ Q A P     T  +A Y++    E DL
Sbjct: 45   GHRGPSAAFVPPAAEPKLF--GGFNSSDTVTSPQRAGPLAGGVTTFVALYDYESRTETDL 102

Query: 810  PFCKGDVLTIVAVTK-----DPNWYKAKN-KVGREGIIPANYVQKREGVKAGTKLSLMPW 971
             F KG+ L IV  T+     + +W+ A +   G+ G IP+NYV   + ++A        W
Sbjct: 103  SFKKGERLQIVNNTRKVDVREGDWWLAHSLSTGQTGYIPSNYVAPSDSIQAEE------W 156

Query: 972  FHGKITREQAERLLCPPET--GLFLVRESTNYPGDYTLCVS----CDG-KVEHYRIM-YH 1127
            + GKITR ++ERLL   E   G FLVRES    G Y L VS      G  V+HY+I    
Sbjct: 157  YFGKITRRESERLLLNAENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLD 216

Query: 1128 ASKLSIDEEVYFENLMQLVEHYTSDADGLCTRLIKPKLMEGTVAAQDEFFRSGWALNMKD 1307
            +    I     F +L QLV +Y+  ADGLC RL    +   +        +  W +  + 
Sbjct: 217  SGGFYITSRTQFNSLQQLVAYYSKHADGLCHRL--TTVCPTSKPQTQGLAKDAWEIPRES 274

Query: 1308 LKLLQTIGKG 1337
            L+L   +G+G
Sbjct: 275  LRLEVKLGQG 284



 Score = 40.0 bits (92), Expect(2) = 6e-26
 Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 2/50 (4%)
 Frame = +1

Query: 1327 LGRGEFGDVMLGDYRGN-KVAVQCIKNDAPA-QAFLAEASVMNQLRHNNL 1470
            LG+G FG+V +G + G  +VA++ +K    + +AFL EA VM +LRH  L
Sbjct: 281  LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKL 330


  Database: RefSeq49_MP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 15,617,559
  Number of sequences in database:  30,036
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 55,498,811
Number of extensions: 1705091
Number of successful extensions: 9486
Number of sequences better than 1.0e-05: 79
Number of HSP's gapped: 9255
Number of HSP's successfully gapped: 103
Length of query: 525
Length of database: 15,617,559
Length adjustment: 106
Effective length of query: 419
Effective length of database: 12,433,743
Effective search space: 5209738317
Effective search space used: 5209738317
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-002939
         (1576 letters)

Database: RefSeq49_SP.fasta 
           24,897 sequences; 11,343,932 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001177102.1| c-src tyrosine kinase [Sus scrofa].               426   e-143
Alignment   gi|XP_003123102.2| PREDICTED: megakaryocyte-associated tyrosine...   197   3e-62
Alignment   gi|XP_003128547.1| PREDICTED: hypothetical protein LOC100524877...   176   3e-44
Alignment   gi|XP_003360652.1| PREDICTED: tyrosine-protein kinase Blk-like ...    99   8e-28
Alignment   gi|XP_003359103.1| PREDICTED: tyrosine-protein kinase Blk-like ...    99   8e-28
Alignment   gi|XP_003356350.1| PREDICTED: tyrosine-protein kinase Lck-like ...    94   4e-27
Alignment   gi|NP_001137185.1| tyrosine-protein kinase Lck [Sus scrofa].          94   5e-27
Alignment   gi|XP_001928649.1| PREDICTED: proto-oncogene tyrosine-protein k...   100   6e-27
Alignment   gi|NP_001073675.2| tyrosine-protein kinase Fyn [Sus scrofa].          90   6e-25
Alignment   gi|XP_003134439.2| PREDICTED: tyrosine-protein kinase HCK-like ...    84   2e-22

>ref|NP_001177102.1| c-src tyrosine kinase [Sus scrofa].
          Length = 450

 Score =  426 bits (1094), Expect(2) = e-143
 Identities = 204/204 (100%), Positives = 204/204 (100%)
 Frame = +3

Query: 726  MSAIQAAWPSGTECIAKYNFHGTAEQDLPFCKGDVLTIVAVTKDPNWYKAKNKVGREGII 905
            MSAIQAAWPSGTECIAKYNFHGTAEQDLPFCKGDVLTIVAVTKDPNWYKAKNKVGREGII
Sbjct: 1    MSAIQAAWPSGTECIAKYNFHGTAEQDLPFCKGDVLTIVAVTKDPNWYKAKNKVGREGII 60

Query: 906  PANYVQKREGVKAGTKLSLMPWFHGKITREQAERLLCPPETGLFLVRESTNYPGDYTLCV 1085
            PANYVQKREGVKAGTKLSLMPWFHGKITREQAERLLCPPETGLFLVRESTNYPGDYTLCV
Sbjct: 61   PANYVQKREGVKAGTKLSLMPWFHGKITREQAERLLCPPETGLFLVRESTNYPGDYTLCV 120

Query: 1086 SCDGKVEHYRIMYHASKLSIDEEVYFENLMQLVEHYTSDADGLCTRLIKPKLMEGTVAAQ 1265
            SCDGKVEHYRIMYHASKLSIDEEVYFENLMQLVEHYTSDADGLCTRLIKPKLMEGTVAAQ
Sbjct: 121  SCDGKVEHYRIMYHASKLSIDEEVYFENLMQLVEHYTSDADGLCTRLIKPKLMEGTVAAQ 180

Query: 1266 DEFFRSGWALNMKDLKLLQTIGKG 1337
            DEFFRSGWALNMKDLKLLQTIGKG
Sbjct: 181  DEFFRSGWALNMKDLKLLQTIGKG 204



 Score =  101 bits (251), Expect(2) = e-143
 Identities = 56/83 (67%), Positives = 61/83 (73%)
 Frame = +1

Query: 1327 LGRGEFGDVMLGDYRGNKVAVQCIKNDAPAQAFLAEASVMNQLRHNNLGTASGRDR*RTK 1506
            +G+GEFGDVMLGDYRGNKVAV+CIKNDA AQAFLAEASVM QLRH+NL    G      K
Sbjct: 201  IGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIV-EEK 259

Query: 1507 AGSTSSHSPWPRGSLVDYLRSRG 1575
             G         +GSLVDYLRSRG
Sbjct: 260  GGLYIVTEYMAKGSLVDYLRSRG 282


>ref|XP_003123102.2| PREDICTED: megakaryocyte-associated tyrosine-protein kinase [Sus
            scrofa].
          Length = 571

 Score =  197 bits (502), Expect(2) = 3e-62
 Identities = 95/198 (47%), Positives = 134/198 (67%), Gaps = 1/198 (0%)
 Frame = +3

Query: 747  WPSGTECIAKYNFHGTAEQDLPFCKGDVLTIVAVTKDPNWYKAKNKV-GREGIIPANYVQ 923
            W  GT+CI K         +L F KGDV+TI+   ++ +WY+AK+   G+EG++ A  ++
Sbjct: 111  WAPGTQCITKCEHMRPKPGELAFHKGDVVTILEACENKSWYRAKHHASGQEGLLAAGALR 170

Query: 924  KREGVKAGTKLSLMPWFHGKITREQAERLLCPPETGLFLVRESTNYPGDYTLCVSCDGKV 1103
            +RE + A  KLSLMPWFHGKI+ ++A + L PPE GLFLVRES  +PGDY LCVS    V
Sbjct: 171  EREALSADPKLSLMPWFHGKISGQEAVQQLQPPEDGLFLVRESARHPGDYVLCVSFGRDV 230

Query: 1104 EHYRIMYHASKLSIDEEVYFENLMQLVEHYTSDADGLCTRLIKPKLMEGTVAAQDEFFRS 1283
             HYR+++    L+IDE V F NLM +VEHY+ D   +CT+L+KPK  +GT +A++E  ++
Sbjct: 231  IHYRVLHREGHLTIDEVVCFCNLMDMVEHYSKDKGAICTKLVKPKRKQGTKSAEEELAKA 290

Query: 1284 GWALNMKDLKLLQTIGKG 1337
            GW LN++ L L   IG+G
Sbjct: 291  GWLLNLQHLTLGAQIGEG 308



 Score = 60.1 bits (144), Expect(2) = 3e-62
 Identities = 36/83 (43%), Positives = 49/83 (59%)
 Frame = +1

Query: 1327 LGRGEFGDVMLGDYRGNKVAVQCIKNDAPAQAFLAEASVMNQLRHNNLGTASGRDR*RTK 1506
            +G GEFG V+ G+Y G KVAV+ IK D  AQAFL E +VM +++H NL    G       
Sbjct: 305  IGEGEFGAVLQGEYLGQKVAVKNIKCDVTAQAFLDETAVMTKMQHKNLVRLLGV---ILH 361

Query: 1507 AGSTSSHSPWPRGSLVDYLRSRG 1575
             G         +G+LV++LR+RG
Sbjct: 362  QGLYIVMEHVSKGNLVNFLRTRG 384


>ref|XP_003128547.1| PREDICTED: hypothetical protein LOC100524877 [Sus scrofa].
          Length = 214

 Score =  176 bits (446), Expect = 3e-44
 Identities = 93/127 (73%), Positives = 93/127 (73%)
 Frame = -1

Query: 412 NNVAGEAPAEFRFQTPTPRLDLGTSRRLPRAAPDXXXXXXXSLHVPRPGDSCGQRLPGAG 233
           NNVAGEAPAEFRFQTPTPRLDLGTSRRLPRAAPD       SLHVPRPGDSCGQRLPGAG
Sbjct: 25  NNVAGEAPAEFRFQTPTPRLDLGTSRRLPRAAPDAGSGAAGSLHVPRPGDSCGQRLPGAG 84

Query: 232 GTAGRGIAPTAALPGDGPARTPPRQDLRTXXXXXXXXXXXXXXXXXXXXXXXXXXXGRKL 53
           GTAGRGIAPTAALPGDGPARTPPRQDLRT                           GRKL
Sbjct: 85  GTAGRGIAPTAALPGDGPARTPPRQDLRTGCGVGREREGGGGLSGGGQARLALGSAGRKL 144

Query: 52  AGLARGS 32
           AGLARGS
Sbjct: 145 AGLARGS 151


>ref|XP_003360652.1| PREDICTED: tyrosine-protein kinase Blk-like [Sus scrofa].
          Length = 501

 Score = 98.6 bits (244), Expect(2) = 8e-28
 Identities = 70/204 (34%), Positives = 107/204 (52%), Gaps = 14/204 (6%)
 Frame = +3

Query: 768  IAKYNFHGTAEQDLPFCKGDVLTIVAVTKDPNWYKAKN-KVGREGIIPANYVQKREGVKA 944
            +A YN++   ++DL   KG+ L I+    D  W+ AK+   GREG +P+N+V + E    
Sbjct: 60   VALYNYNAMNDRDLQMLKGEKLQILKEAGD--WWLAKSLTTGREGYVPSNFVARVE---- 113

Query: 945  GTKLSLMPWFHGKITREQAERLLCPP--ETGLFLVRESTNYPGDYTLCV---SCDGKV-E 1106
               L +  WF   I R  AER L  P  + G FL+RES    G ++L V   +  G+V +
Sbjct: 114  --TLEVEKWFFRSICRRDAERQLLAPVNKVGSFLIRESETSKGTFSLSVKDVTSQGEVIK 171

Query: 1107 HYRIMYHASKLSIDEEVY-------FENLMQLVEHYTSDADGLCTRLIKPKLMEGTVAAQ 1265
            HY+I       S+DE  Y       F  L  LV+HY+   DGLC RL +P +   ++A Q
Sbjct: 172  HYKIR------SLDEGGYYISPRNTFPTLQALVQHYSKKGDGLCQRLTQPCV---SLAPQ 222

Query: 1266 DEFFRSGWALNMKDLKLLQTIGKG 1337
            + + +  W +  + LKL++ +G G
Sbjct: 223  NPWAQDEWEIPRQSLKLVRKLGSG 246



 Score = 44.3 bits (103), Expect(2) = 8e-28
 Identities = 23/52 (44%), Positives = 35/52 (67%), Gaps = 2/52 (3%)
 Frame = +1

Query: 1321 RPLGRGEFGDVMLGDYRGN-KVAVQCIKNDAPA-QAFLAEASVMNQLRHNNL 1470
            R LG G+FG+V +G Y+ N KVA++ +K    + +AFL EA++M  L+H  L
Sbjct: 241  RKLGSGQFGEVWMGYYKNNIKVAIKTLKEGTMSPEAFLGEANLMKTLQHERL 292


>ref|XP_003359103.1| PREDICTED: tyrosine-protein kinase Blk-like [Sus scrofa].
          Length = 501

 Score = 98.6 bits (244), Expect(2) = 8e-28
 Identities = 70/204 (34%), Positives = 107/204 (52%), Gaps = 14/204 (6%)
 Frame = +3

Query: 768  IAKYNFHGTAEQDLPFCKGDVLTIVAVTKDPNWYKAKN-KVGREGIIPANYVQKREGVKA 944
            +A YN++   ++DL   KG+ L I+    D  W+ AK+   GREG +P+N+V + E    
Sbjct: 60   VALYNYNAMNDRDLQMLKGEKLQILKEAGD--WWLAKSLTTGREGYVPSNFVARVE---- 113

Query: 945  GTKLSLMPWFHGKITREQAERLLCPP--ETGLFLVRESTNYPGDYTLCV---SCDGKV-E 1106
               L +  WF   I R  AER L  P  + G FL+RES    G ++L V   +  G+V +
Sbjct: 114  --TLEVEKWFFRSICRRDAERQLLAPVNKVGSFLIRESETSKGTFSLSVKDVTSQGEVIK 171

Query: 1107 HYRIMYHASKLSIDEEVY-------FENLMQLVEHYTSDADGLCTRLIKPKLMEGTVAAQ 1265
            HY+I       S+DE  Y       F  L  LV+HY+   DGLC RL +P +   ++A Q
Sbjct: 172  HYKIR------SLDEGGYYISPRNTFPTLQALVQHYSKKGDGLCQRLTQPCV---SLAPQ 222

Query: 1266 DEFFRSGWALNMKDLKLLQTIGKG 1337
            + + +  W +  + LKL++ +G G
Sbjct: 223  NPWAQDEWEIPRQSLKLVRKLGSG 246



 Score = 44.3 bits (103), Expect(2) = 8e-28
 Identities = 23/52 (44%), Positives = 35/52 (67%), Gaps = 2/52 (3%)
 Frame = +1

Query: 1321 RPLGRGEFGDVMLGDYRGN-KVAVQCIKNDAPA-QAFLAEASVMNQLRHNNL 1470
            R LG G+FG+V +G Y+ N KVA++ +K    + +AFL EA++M  L+H  L
Sbjct: 241  RKLGSGQFGEVWMGYYKNNIKVAIKTLKEGTMSPEAFLGEANLMKTLQHERL 292


>ref|XP_003356350.1| PREDICTED: tyrosine-protein kinase Lck-like [Sus scrofa].
          Length = 444

 Score = 94.4 bits (233), Expect(2) = 4e-27
 Identities = 69/199 (34%), Positives = 104/199 (52%), Gaps = 9/199 (4%)
 Frame = +3

Query: 768  IAKYNFHGTAEQDLPFCKGDVLTIVAVTKDPNWYKAKN-KVGREGIIPANYVQKREGVKA 944
            IA +++  + + DL F KG+ L I+   ++  W+KA++   G EG IP N+V K      
Sbjct: 67   IALHSYEPSHDGDLGFEKGEQLRILE--QNGEWWKAQSLTTGLEGFIPFNFVAK------ 118

Query: 945  GTKLSLMPWFHGKITREQAER-LLCPPET-GLFLVRESTNYPGDYTLCVSCDGK-----V 1103
               L   PWF   ++R+ AER LL P  T G FL+RES +  G ++L V    +     V
Sbjct: 119  ANSLEPEPWFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVV 178

Query: 1104 EHYRIM-YHASKLSIDEEVYFENLMQLVEHYTSDADGLCTRLIKPKLMEGTVAAQDEFFR 1280
            +HY+I         I   + F  L +LV HYT+ +DGLCTRL +P     T   Q  ++ 
Sbjct: 179  KHYKIRNLDKGGFYISPRITFPGLHELVHHYTNSSDGLCTRLNRPC---QTQKPQKPWWE 235

Query: 1281 SGWALNMKDLKLLQTIGKG 1337
              W +  + LKL++ +G G
Sbjct: 236  DEWEVPRETLKLVERLGAG 254



 Score = 46.2 bits (108), Expect(2) = 4e-27
 Identities = 25/50 (50%), Positives = 36/50 (72%), Gaps = 2/50 (4%)
 Frame = +1

Query: 1327 LGRGEFGDVMLGDYRGN-KVAVQCIKNDAPA-QAFLAEASVMNQLRHNNL 1470
            LG G+FG+V +G Y G+ KVAV+ +K  + +  AFLAEA++M QL+H  L
Sbjct: 251  LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRL 300


>ref|NP_001137185.1| tyrosine-protein kinase Lck [Sus scrofa].
          Length = 509

 Score = 94.0 bits (232), Expect(2) = 5e-27
 Identities = 70/199 (35%), Positives = 104/199 (52%), Gaps = 9/199 (4%)
 Frame = +3

Query: 768  IAKYNFHGTAEQDLPFCKGDVLTIVAVTKDPNWYKAKN-KVGREGIIPANYVQKREGVKA 944
            IA +++  + + DL F KG+ L I+   ++  W+KA++   G EG IP N+V K      
Sbjct: 67   IALHSYEPSHDGDLGFEKGEQLRILE--QNGEWWKAQSLTTGLEGFIPFNFVAK------ 118

Query: 945  GTKLSLMPWFHGKITREQAER-LLCPPET-GLFLVRESTNYPGDYTLCV----SCDGKV- 1103
               L   PWF   ++R  AER LL P  T G FL+RES +  G ++L V       G+V 
Sbjct: 119  ANSLEPEPWFFKNLSRRDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVM 178

Query: 1104 EHYRIM-YHASKLSIDEEVYFENLMQLVEHYTSDADGLCTRLIKPKLMEGTVAAQDEFFR 1280
            +HY+I         I   + F  L +LV HYT+ +DGLCTRL +P     T   Q  ++ 
Sbjct: 179  KHYKIRNLDKGGFYISPRITFPGLHELVHHYTNSSDGLCTRLNRPC---QTQKPQKPWWE 235

Query: 1281 SGWALNMKDLKLLQTIGKG 1337
              W +  + LKL++ +G G
Sbjct: 236  DEWEVPRETLKLVERLGAG 254



 Score = 46.2 bits (108), Expect(2) = 5e-27
 Identities = 25/50 (50%), Positives = 36/50 (72%), Gaps = 2/50 (4%)
 Frame = +1

Query: 1327 LGRGEFGDVMLGDYRGN-KVAVQCIKNDAPA-QAFLAEASVMNQLRHNNL 1470
            LG G+FG+V +G Y G+ KVAV+ +K  + +  AFLAEA++M QL+H  L
Sbjct: 251  LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRL 300


>ref|XP_001928649.1| PREDICTED: proto-oncogene tyrosine-protein kinase Src [Sus scrofa].
          Length = 542

 Score = 99.8 bits (247), Expect(2) = 6e-27
 Identities = 75/223 (33%), Positives = 106/223 (47%), Gaps = 11/223 (4%)
 Frame = +3

Query: 702  GDARSSEKMSAIQAAWPSG---TECIAKYNFHGTAEQDLPFCKGDVLTIVAVTKDPNWYK 872
            G   SS+ +++ Q A P     T  +A Y++    E DL F KG+ L IV  T+   W  
Sbjct: 71   GGFNSSDTVTSPQRAGPLAGGVTTFVALYDYESRTETDLSFKKGERLQIVNNTEGDWWLA 130

Query: 873  AKNKVGREGIIPANYVQKREGVKAGTKLSLMPWFHGKITREQAERLLCPPET--GLFLVR 1046
                 G+ G IP+NYV   + ++A        W+ GKITR ++ERLL   E   G FLVR
Sbjct: 131  HSLSTGQTGYIPSNYVAPSDSIQA------EEWYFGKITRRESERLLLNAENPRGTFLVR 184

Query: 1047 ESTNYPGDYTLCVS----CDG-KVEHYRI-MYHASKLSIDEEVYFENLMQLVEHYTSDAD 1208
            ES    G Y L VS      G  V+HY+I    +    I     F +L QLV +Y+  AD
Sbjct: 185  ESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFNSLQQLVAYYSKHAD 244

Query: 1209 GLCTRLIKPKLMEGTVAAQDEFFRSGWALNMKDLKLLQTIGKG 1337
            GLC RL    +   +        +  W +  + L+L   +G+G
Sbjct: 245  GLCHRL--TTVCPTSKPQTQGLAKDAWEIPRESLRLEVKLGQG 285



 Score = 40.0 bits (92), Expect(2) = 6e-27
 Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 2/50 (4%)
 Frame = +1

Query: 1327 LGRGEFGDVMLGDYRGN-KVAVQCIKNDAPA-QAFLAEASVMNQLRHNNL 1470
            LG+G FG+V +G + G  +VA++ +K    + +AFL EA VM +LRH  L
Sbjct: 282  LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKL 331


>ref|NP_001073675.2| tyrosine-protein kinase Fyn [Sus scrofa].
          Length = 537

 Score = 90.1 bits (222), Expect(2) = 6e-25
 Identities = 71/229 (31%), Positives = 111/229 (48%), Gaps = 17/229 (7%)
 Frame = +3

Query: 702  GDARSSEKMSAIQAAWPSG-TECIAKYNFHGTAEQDLPFCKGDVLTIVAVTKDPNWYKAK 878
            G   SS     ++    +G T  +A Y++    E DL F KG+   I+  + + +W++A+
Sbjct: 65   GGVSSSSHTGTLRTRGGTGVTLFVALYDYEARTEDDLSFHKGEKFQILN-SSEGDWWEAR 123

Query: 879  N-KVGREGIIPANYVQKREGVKAGTKLSLMPWFHGKITREQAERLLCP--PETGLFLVRE 1049
            +   G  G IP+NYV   + ++A        W+ GK+ R+ AER L       G FL+RE
Sbjct: 124  SLTTGETGYIPSNYVAPVDSIQA------EEWYFGKLGRKDAERQLLSFGNPRGTFLIRE 177

Query: 1050 STNYPGDYTLCVS--CDGKVEHYRIMYHASKLS-----IDEEVYFENLMQLVEHYTSDAD 1208
            S    G Y+L +    D K +H +  Y   KL      I     FE L QLV+HY+  A 
Sbjct: 178  SETTKGAYSLSIRDWDDMKGDHVK-HYKIRKLDNGGYYITTRAQFETLQQLVQHYSERAA 236

Query: 1209 GLCTRLI------KPKLMEGTVAAQDEFFRSGWALNMKDLKLLQTIGKG 1337
            GLC RL+       P+L + +V  +D      W +  + L+L++ +G G
Sbjct: 237  GLCCRLVVPCHKGMPRLTDLSVKTKDV-----WEIPRESLQLIKRLGNG 280



 Score = 43.1 bits (100), Expect(2) = 6e-25
 Identities = 21/50 (42%), Positives = 34/50 (68%), Gaps = 2/50 (4%)
 Frame = +1

Query: 1327 LGRGEFGDVMLGDYRGN-KVAVQCIK-NDAPAQAFLAEASVMNQLRHNNL 1470
            LG G+FG+V +G + GN KVA++ +K      ++FL EA +M +L+H+ L
Sbjct: 277  LGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMKKLKHDKL 326


>ref|XP_003134439.2| PREDICTED: tyrosine-protein kinase HCK-like [Sus scrofa].
          Length = 553

 Score = 83.6 bits (205), Expect(2) = 2e-22
 Identities = 79/286 (27%), Positives = 121/286 (42%), Gaps = 15/286 (5%)
 Frame = +3

Query: 525  RTQTSLYRTPRGPLRPSLLGWPHGPSRRPLMLPAARWPGPQCPEKALMVPSDRSAFL*HG 704
            R Q S    P+      L   P    +   + PAA  PG     +A      R   L  G
Sbjct: 23   RRQLSQEGPPKNNAPKHLGAQPQPLLQSHSLFPAAPAPGHPGICRAGGSLQLRGPGLPTG 82

Query: 705  DARSSEKMSAIQAAWPSGTE------CIAKYNFHGTAEQDLPFCKGDVLTIVAVTKDPNW 866
                ++   + Q+  P  TE       +A Y++     +DL F KGD +  V + +   W
Sbjct: 83   GGTGAQWPDSSQSNPPEATEGSEDIIVVALYDYEAIHHEDLSFQKGDQM--VVLEESGEW 140

Query: 867  YKAKNKVGR-EGIIPANYVQKREGVKAGTKLSLMPWFHGKITREQAERLLCPPET--GLF 1037
            ++A++   R EG IP+NYV +         L    WF   I+R+ AER L  P    G F
Sbjct: 141  WRARSLATRNEGYIPSNYVARVNS------LETEEWFFKGISRKDAERQLLAPGNVLGSF 194

Query: 1038 LVRESTNYPGDYTLCV-----SCDGKVEHYRIM-YHASKLSIDEEVYFENLMQLVEHYTS 1199
            ++R+S    G Y+L V          V+HY+I    +    I     F  L +LV HY  
Sbjct: 195  MIRDSETTKGSYSLSVRDYDPQHRDTVKHYKIRTLDSGGFYISPRSTFNTLQELVAHYKK 254

Query: 1200 DADGLCTRLIKPKLMEGTVAAQDEFFRSGWALNMKDLKLLQTIGKG 1337
             +DGLC +L  P +   +   Q  + +  W +  + LK+ + +G G
Sbjct: 255  GSDGLCQKLTVPCV---SSKPQKPWEKDAWEIPRESLKMEKRLGAG 297



 Score = 40.8 bits (94), Expect(2) = 2e-22
 Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 2/50 (4%)
 Frame = +1

Query: 1327 LGRGEFGDVMLGDY-RGNKVAVQCIK-NDAPAQAFLAEASVMNQLRHNNL 1470
            LG G+FG+V L  Y +  KVAV+ +K      +AFLAEA++M  L+H+ L
Sbjct: 294  LGAGQFGEVWLATYNKHTKVAVKTMKPGSMSVEAFLAEANLMKTLQHDKL 343


  Database: RefSeq49_SP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 11,343,932
  Number of sequences in database:  24,897
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 42,288,997
Number of extensions: 1368098
Number of successful extensions: 8609
Number of sequences better than 1.0e-05: 57
Number of HSP's gapped: 8431
Number of HSP's successfully gapped: 72
Length of query: 525
Length of database: 11,343,932
Length adjustment: 104
Effective length of query: 421
Effective length of database: 8,754,644
Effective search space: 3685705124
Effective search space used: 3685705124
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-002939
         (1576 letters)

Database: Sscrofa_10.2.fasta 
           4582 sequences; 2,808,509,378 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Sscrofa_Chr07                                                         527   e-147

>Sscrofa_Chr07 
||          Length = 134764511

 Score =  527 bits (266), Expect = e-147
 Identities = 266/266 (100%)
 Strand = Plus / Minus

                                                                            
Query: 146      tgtccggaggtcctgccggggtggggtccgagctgggccatcgcccggcagcgccgccgt 205
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63443772 tgtccggaggtcctgccggggtggggtccgagctgggccatcgcccggcagcgccgccgt 63443713

                                                                            
Query: 206      cggggctatcccccggccagccgtccctcccgctccaggcagcctctggccgcaggagtc 265
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63443712 cggggctatcccccggccagccgtccctcccgctccaggcagcctctggccgcaggagtc 63443653

                                                                            
Query: 266      tccggggcgtggaacgtggagagaccctgcggcccccgagccagcgtccggggcagcccg 325
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63443652 tccggggcgtggaacgtggagagaccctgcggcccccgagccagcgtccggggcagcccg 63443593

                                                                            
Query: 326      gggcagccggcgcgacgtccccagatcgagccttggtgtcggcgtttggaagcggaactc 385
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63443592 gggcagccggcgcgacgtccccagatcgagccttggtgtcggcgtttggaagcggaactc 63443533

                                          
Query: 386      tgccggggcctcaccggctacattgt 411
                ||||||||||||||||||||||||||
Sbjct: 63443532 tgccggggcctcaccggctacattgt 63443507



 Score =  436 bits (220), Expect = e-119
 Identities = 220/220 (100%)
 Strand = Plus / Minus

                                                                            
Query: 968      ctggttccatggcaagatcacaagggagcaggcagagcggctcctgtgcccaccagagac 1027
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63429015 ctggttccatggcaagatcacaagggagcaggcagagcggctcctgtgcccaccagagac 63428956

                                                                            
Query: 1028     aggcctgttcctggtgcgggagagcaccaactaccccggggactacacgctgtgcgtgag 1087
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63428955 aggcctgttcctggtgcgggagagcaccaactaccccggggactacacgctgtgcgtgag 63428896

                                                                            
Query: 1088     ctgcgacggcaaggtggagcactaccgcatcatgtaccacgccagcaagctcagcatcga 1147
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63428895 ctgcgacggcaaggtggagcactaccgcatcatgtaccacgccagcaagctcagcatcga 63428836

                                                        
Query: 1148     cgaggaggtgtactttgagaacctcatgcagctggtggag 1187
                ||||||||||||||||||||||||||||||||||||||||
Sbjct: 63428835 cgaggaggtgtactttgagaacctcatgcagctggtggag 63428796



 Score =  337 bits (170), Expect = 1e-89
 Identities = 170/170 (100%)
 Strand = Plus / Minus

                                                                            
Query: 491      gcctctgtctggccgtccttcctccccctcctttcgcacccagacctctttgtaccgcac 550
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63443427 gcctctgtctggccgtccttcctccccctcctttcgcacccagacctctttgtaccgcac 63443368

                                                                            
Query: 551      cccccggggacccctgcgcccctcccttctcggctggccgcatggaccgtcccgcaggcc 610
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63443367 cccccggggacccctgcgcccctcccttctcggctggccgcatggaccgtcccgcaggcc 63443308

                                                                  
Query: 611      gctgatgctgcccgcagcgaggtggcccggaccgcagtgccccgaaaaag 660
                ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63443307 gctgatgctgcccgcagcgaggtggcccggaccgcagtgccccgaaaaag 63443258



 Score =  230 bits (116), Expect = 2e-57
 Identities = 119/120 (99%)
 Strand = Plus / Minus

                                                                            
Query: 848      caccaaggaccccaactggtacaaagccaagaacaaggtgggccgtgagggcatcatccc 907
                |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63429517 cacccaggaccccaactggtacaaagccaagaacaaggtgggccgtgagggcatcatccc 63429458

                                                                            
Query: 908      agccaactacgtccaaaagcgggagggcgtgaaggcaggcaccaaactcagcctcatgcc 967
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63429457 agccaactacgtccaaaagcgggagggcgtgaaggcaggcaccaaactcagcctcatgcc 63429398



 Score =  218 bits (110), Expect = 7e-54
 Identities = 117/118 (99%), Gaps = 1/118 (0%)
 Strand = Plus / Minus

                                                                            
Query: 738      caggccgcctggccatccggtacagaatgcattgccaagtacaactttcacggcactgct 797
                ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 63429736 caggccgcctggccatccggtacagaatgcattgccaagtaca-ctttcacggcactgct 63429678

                                                                          
Query: 798      gagcaggaccttcctttctgcaaaggagacgtgctcaccattgtggccgtcaccaagg 855
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63429677 gagcaggaccttcctttctgcaaaggagacgtgctcaccattgtggccgtcaccaagg 63429620



 Score =  196 bits (99), Expect = 3e-47
 Identities = 99/99 (100%)
 Strand = Plus / Minus

                                                                            
Query: 1186     agcactacacctcagatgcagatggactctgtacccgcctcatcaagccaaaactcatgg 1245
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63428015 agcactacacctcagatgcagatggactctgtacccgcctcatcaagccaaaactcatgg 63427956

                                                       
Query: 1246     agggcaccgtggcggcccaggatgagttctttcgcagtg 1284
                |||||||||||||||||||||||||||||||||||||||
Sbjct: 63427955 agggcaccgtggcggcccaggatgagttctttcgcagtg 63427917



 Score =  180 bits (91), Expect = 2e-42
 Identities = 91/91 (100%)
 Strand = Plus / Minus

                                                                            
Query: 1        gcgctgccgcgggcggaggatccggggccgcgcttcctctcgccaggcctgcgagcttcc 60
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63443917 gcgctgccgcgggcggaggatccggggccgcgcttcctctcgccaggcctgcgagcttcc 63443858

                                               
Query: 61       tcccagcggagcccagggcgagccgagcttg 91
                |||||||||||||||||||||||||||||||
Sbjct: 63443857 tcccagcggagcccagggcgagccgagcttg 63443827



 Score =  176 bits (89), Expect = 2e-41
 Identities = 98/101 (97%)
 Strand = Plus / Minus

                                                                            
Query: 1347     agacgtgatgcttggcgactaccgagggaacaaagtcgccgtccagtgcattaaaaatga 1406
                ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||
Sbjct: 63427563 agacgtgatgcttggcgactaccgagggaacaaagtcgccgtcaagtgcattaagaatga 63427504

                                                         
Query: 1407     cgcccctgcccaggccttcctggctgaagcctcagttatga 1447
                |||| ||||||||||||||||||||||||||||||||||||
Sbjct: 63427503 cgccactgcccaggccttcctggctgaagcctcagttatga 63427463



 Score =  165 bits (83), Expect = 9e-38
 Identities = 83/83 (100%)
 Strand = Plus / Minus

                                                                            
Query: 659      agctctcatggtaccaagtgataggtcggccttcctgtgacacggggacgccagatcttc 718
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63430167 agctctcatggtaccaagtgataggtcggccttcctgtgacacggggacgccagatcttc 63430108

                                       
Query: 719      tgagaagatgtcggcaatacagg 741
                |||||||||||||||||||||||
Sbjct: 63430107 tgagaagatgtcggcaatacagg 63430085



 Score =  117 bits (59), Expect = 2e-23
 Identities = 66/67 (98%), Gaps = 1/67 (1%)
 Strand = Plus / Minus

                                                                            
Query: 1282     gtggctgggcactgaacatgaaggacctgaagctgctgcagaccattgggaaggggggaa 1341
                ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 63427708 gtggctgggcactgaacatgaaggacctgaagctgctgcagaccattgggaag-ggggaa 63427650

                       
Query: 1342     tttggag 1348
                |||||||
Sbjct: 63427649 tttggag 63427643



 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 81/93 (87%), Gaps = 2/93 (2%)
 Strand = Plus / Minus

                                                                            
Query: 1450     caacttcggcataacaaccttggtaccgcttctgggcgtgatcgttaaagaacaaaggcg 1509
                ||||||||||||| |||||| ||||| ||||||||||||||||| || || | |||||||
Sbjct: 63427362 caacttcggcatagcaacct-ggtacagcttctgggcgtgatcg-tagaggagaaaggcg 63427305

                                                 
Query: 1510     ggctctacatcctcccacagtccttggccaagg 1542
                ||||||||||| || || ||| | |||||||||
Sbjct: 63427304 ggctctacatcgtcacagagtacatggccaagg 63427272



 Score = 69.9 bits (35), Expect = 4e-09
 Identities = 35/35 (100%)
 Strand = Plus / Minus

                                                   
Query: 1542     ggggagcctggtggactatctgcgatcccggggtc 1576
                |||||||||||||||||||||||||||||||||||
Sbjct: 63426827 ggggagcctggtggactatctgcgatcccggggtc 63426793


  Database: Sscrofa_10.2.fasta
    Posted date:  Nov 16, 2011 10:34 AM
  Number of letters in database: 2,808,509,378
  Number of sequences in database:  4582
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 31,295,048
Number of extensions: 181
Number of successful extensions: 181
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 179
Number of HSP's successfully gapped: 12
Length of query: 1576
Length of database: 2,808,509,378
Length adjustment: 22
Effective length of query: 1554
Effective length of database: 2,808,408,574
Effective search space: 4364266923996
Effective search space used: 4364266923996
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)