Animal-Genome cDNA 20110601C-002996


Search to RefSeqBP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-002996
         (1193 letters)

Database: RefSeq49_BP.fasta 
           33,088 sequences; 17,681,374 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001030393.1| serine/threonine-protein phosphatase PP1-alp...   677   0.0  
Alignment   gi|XP_002683644.1| PREDICTED: protein phosphatase 1, catalytic ...   676   0.0  
Alignment   gi|NP_777006.1| serine/threonine-protein phosphatase PP1-gamma ...   615   e-176
Alignment   gi|NP_001029825.1| serine/threonine-protein phosphatase PP1-bet...   600   e-172
Alignment   gi|XP_002683645.1| PREDICTED: protein phosphatase 1, catalytic ...   575   e-164
Alignment   gi|NP_001069325.1| serine/threonine-protein phosphatase 2A cata...   300   2e-81
Alignment   gi|NP_851374.1| serine/threonine-protein phosphatase 2A catalyt...   294   9e-80
Alignment   gi|NP_001092578.1| serine/threonine-protein phosphatase 4 catal...   293   2e-79
Alignment   gi|NP_001124222.1| serine/threonine-protein phosphatase 6 catal...   267   1e-71
Alignment   gi|NP_777212.1| serine/threonine-protein phosphatase 2B catalyt...   225   5e-59

>ref|NP_001030393.1| serine/threonine-protein phosphatase PP1-alpha catalytic subunit [Bos
            taurus].
          Length = 330

 Score =  677 bits (1748), Expect = 0.0
 Identities = 324/325 (99%), Positives = 324/325 (99%)
 Frame = +2

Query: 101  MSDSEKLNLDSIIGRLLEVQGSRPGKNVQLTENEIRGLCLKSREIFLSQPILLELEAPLK 280
            MSDSEKLNLDSIIGRLLEVQGSRPGKNVQLTENEIRGLCLKSREIFLSQPILLELEAPLK
Sbjct: 1    MSDSEKLNLDSIIGRLLEVQGSRPGKNVQLTENEIRGLCLKSREIFLSQPILLELEAPLK 60

Query: 281  ICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 460
            ICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL
Sbjct: 61   ICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 120

Query: 461  LRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDL 640
            LRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDL
Sbjct: 121  LRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDL 180

Query: 641  QSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKFLHKHD 820
            QSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKFLHKHD
Sbjct: 181  QSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKFLHKHD 240

Query: 821  LDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAD 1000
            LDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAD
Sbjct: 241  LDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAD 300

Query: 1001 XNKGKYGQFSGLNPGGRPITPPRNS 1075
             NKGKYGQFSGLNPGGRPITPPRNS
Sbjct: 301  KNKGKYGQFSGLNPGGRPITPPRNS 325


>ref|XP_002683644.1| PREDICTED: protein phosphatase 1, catalytic subunit, alpha-like
            isoform 1 [Bos taurus].
          Length = 330

 Score =  676 bits (1745), Expect = 0.0
 Identities = 323/325 (99%), Positives = 324/325 (99%)
 Frame = +2

Query: 101  MSDSEKLNLDSIIGRLLEVQGSRPGKNVQLTENEIRGLCLKSREIFLSQPILLELEAPLK 280
            MSDSEKLNLDSIIGRLLEVQGSRPGKNVQLTENEIRGLCLKSREIFLSQPILLELEAPLK
Sbjct: 1    MSDSEKLNLDSIIGRLLEVQGSRPGKNVQLTENEIRGLCLKSREIFLSQPILLELEAPLK 60

Query: 281  ICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 460
            ICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKI+YPENFFL
Sbjct: 61   ICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIRYPENFFL 120

Query: 461  LRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDL 640
            LRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDL
Sbjct: 121  LRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDL 180

Query: 641  QSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKFLHKHD 820
            QSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKFLHKHD
Sbjct: 181  QSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKFLHKHD 240

Query: 821  LDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAD 1000
            LDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAD
Sbjct: 241  LDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAD 300

Query: 1001 XNKGKYGQFSGLNPGGRPITPPRNS 1075
             NKGKYGQFSGLNPGGRPITPPRNS
Sbjct: 301  KNKGKYGQFSGLNPGGRPITPPRNS 325


>ref|NP_777006.1| serine/threonine-protein phosphatase PP1-gamma catalytic subunit [Bos
            taurus].
          Length = 323

 Score =  615 bits (1587), Expect = e-176
 Identities = 297/323 (91%), Positives = 304/323 (94%)
 Frame = +2

Query: 101  MSDSEKLNLDSIIGRLLEVQGSRPGKNVQLTENEIRGLCLKSREIFLSQPILLELEAPLK 280
            M+D +KLN+DSII RLLEV+GS+PGKNVQL ENEIRGLCLKSREIFLSQPILLELEAPLK
Sbjct: 1    MADIDKLNIDSIIQRLLEVRGSKPGKNVQLQENEIRGLCLKSREIFLSQPILLELEAPLK 60

Query: 281  ICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 460
            ICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL
Sbjct: 61   ICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 120

Query: 461  LRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDL 640
            LRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDL
Sbjct: 121  LRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDL 180

Query: 641  QSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKFLHKHD 820
            QSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDV GWGENDRGVSFTFGAEVVAKFLHKHD
Sbjct: 181  QSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVLGWGENDRGVSFTFGAEVVAKFLHKHD 240

Query: 821  LDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAD 1000
            LDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPA+
Sbjct: 241  LDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAE 300

Query: 1001 XNKGKYGQFSGLNPGGRPITPPR 1069
              K             RP+TPPR
Sbjct: 301  KKKPN---------ATRPVTPPR 314


>ref|NP_001029825.1| serine/threonine-protein phosphatase PP1-beta catalytic subunit [Bos
            taurus].
          Length = 327

 Score =  600 bits (1548), Expect = e-172
 Identities = 290/325 (89%), Positives = 308/325 (94%)
 Frame = +2

Query: 101  MSDSEKLNLDSIIGRLLEVQGSRPGKNVQLTENEIRGLCLKSREIFLSQPILLELEAPLK 280
            M+D E LN+DS+I RLLEV+G RPGK VQ+TE E+RGLC+KSREIFLSQPILLELEAPLK
Sbjct: 1    MADGE-LNVDSLITRLLEVRGCRPGKIVQMTEAEVRGLCIKSREIFLSQPILLELEAPLK 59

Query: 281  ICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 460
            ICGDIHGQY DLLRLFEYGGFPPE+NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL
Sbjct: 60   ICGDIHGQYTDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 119

Query: 461  LRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDL 640
            LRGNHECASINRIYGFYDECKRR+NIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDL
Sbjct: 120  LRGNHECASINRIYGFYDECKRRFNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDL 179

Query: 641  QSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKFLHKHD 820
            QSMEQIRRIMRPTDVPD GLLCDLLWSDPDKDVQGWGENDRGVSFTFGA+VV+KFL++HD
Sbjct: 180  QSMEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWGENDRGVSFTFGADVVSKFLNRHD 239

Query: 821  LDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAD 1000
            LDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAG MMSVDETLMCSFQILKP++
Sbjct: 240  LDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGGMMSVDETLMCSFQILKPSE 299

Query: 1001 XNKGKYGQFSGLNPGGRPITPPRNS 1075
              K KY Q+ GLN  GRP+TPPR +
Sbjct: 300  -KKAKY-QYGGLN-SGRPVTPPRTA 321


>ref|XP_002683645.1| PREDICTED: protein phosphatase 1, catalytic subunit, alpha-like
            isoform 2 [Bos taurus].
          Length = 288

 Score =  575 bits (1483), Expect = e-164
 Identities = 281/325 (86%), Positives = 282/325 (86%)
 Frame = +2

Query: 101  MSDSEKLNLDSIIGRLLEVQGSRPGKNVQLTENEIRGLCLKSREIFLSQPILLELEAPLK 280
            MSDSEKLNLDSIIGRLLE                                          
Sbjct: 1    MSDSEKLNLDSIIGRLLE------------------------------------------ 18

Query: 281  ICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 460
            ICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKI+YPENFFL
Sbjct: 19   ICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIRYPENFFL 78

Query: 461  LRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDL 640
            LRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDL
Sbjct: 79   LRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDL 138

Query: 641  QSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKFLHKHD 820
            QSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKFLHKHD
Sbjct: 139  QSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKFLHKHD 198

Query: 821  LDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAD 1000
            LDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAD
Sbjct: 199  LDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAD 258

Query: 1001 XNKGKYGQFSGLNPGGRPITPPRNS 1075
             NKGKYGQFSGLNPGGRPITPPRNS
Sbjct: 259  KNKGKYGQFSGLNPGGRPITPPRNS 283


>ref|NP_001069325.1| serine/threonine-protein phosphatase 2A catalytic subunit beta
           isoform [Bos taurus].
          Length = 309

 Score =  300 bits (767), Expect = 2e-81
 Identities = 138/272 (50%), Positives = 190/272 (69%), Gaps = 1/272 (0%)
 Frame = +2

Query: 185 QLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYL 364
           QL EN++R LC K++EI   +  + E+  P+ +CGD+HGQ++DL+ LF  GG  P++NYL
Sbjct: 22  QLNENQVRTLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYL 81

Query: 365 FLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIK 541
           F+GDYVDRG  S+ET+ LL+A K++YPE   +LRGNHE   I ++YGFYDEC R+Y N  
Sbjct: 82  FMGDYVDRGYYSVETVTLLVALKVRYPERITILRGNHESRQITQVYGFYDECLRKYGNAN 141

Query: 542 LWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWS 721
           +WK FTD F+ LP+ A+VD +IFC HGGLSP + +++ IR + R  +VP +G +CDLLWS
Sbjct: 142 VWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEGPMCDLLWS 201

Query: 722 DPDKDVQGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLF 901
           DPD D  GWG + RG  +TFG ++   F H + L L+ RAHQ+V +GY +   R +VT+F
Sbjct: 202 DPD-DRGGWGISPRGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGYNWCHDRNVVTIF 260

Query: 902 SAPNYCGEFDNAGAMMSVDETLMCSFQILKPA 997
           SAPNYC    N  A+M +D+TL  SF    PA
Sbjct: 261 SAPNYCYRCGNQAAIMELDDTLKYSFLQFDPA 292


>ref|NP_851374.1| serine/threonine-protein phosphatase 2A catalytic subunit alpha
           isoform [Bos taurus].
          Length = 309

 Score =  294 bits (753), Expect = 9e-80
 Identities = 135/272 (49%), Positives = 190/272 (69%), Gaps = 1/272 (0%)
 Frame = +2

Query: 185 QLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYL 364
           QL+E++++ LC K++EI   +  + E+  P+ +CGD+HGQ++DL+ LF  GG  P++NYL
Sbjct: 22  QLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYL 81

Query: 365 FLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIK 541
           F+GDYVDRG  S+ET+ LL+A K++Y E   +LRGNHE   I ++YGFYDEC R+Y N  
Sbjct: 82  FMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNAN 141

Query: 542 LWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWS 721
           +WK FTD F+ LP+ A+VD +IFC HGGLSP + +++ IR + R  +VP +G +CDLLWS
Sbjct: 142 VWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEGPMCDLLWS 201

Query: 722 DPDKDVQGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLF 901
           DPD D  GWG + RG  +TFG ++   F H + L L+ RAHQ+V +GY +   R +VT+F
Sbjct: 202 DPD-DRGGWGISPRGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGYNWCHDRNVVTIF 260

Query: 902 SAPNYCGEFDNAGAMMSVDETLMCSFQILKPA 997
           SAPNYC    N  A+M +D+TL  SF    PA
Sbjct: 261 SAPNYCYRCGNQAAIMELDDTLKYSFLQFDPA 292


>ref|NP_001092578.1| serine/threonine-protein phosphatase 4 catalytic subunit [Bos
           taurus].
          Length = 307

 Score =  293 bits (750), Expect = 2e-79
 Identities = 133/271 (49%), Positives = 194/271 (71%), Gaps = 1/271 (0%)
 Frame = +2

Query: 188 LTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLF 367
           + E+E++ LC K+REI + +  +  +++P+ +CGDIHGQ+YDL  LF  GG  PE+NYLF
Sbjct: 20  IKESEVKALCAKAREILVEESNVQRVDSPVTVCGDIHGQFYDLKELFRVGGDVPETNYLF 79

Query: 368 LGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIKL 544
           +GD+VDRG  S+ET  LLLA K++YP+   L+RGNHE   I ++YGFYDEC R+Y ++ +
Sbjct: 80  MGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVTV 139

Query: 545 WKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSD 724
           W+  T+ F+ L ++AI+D KIFC HGGLSP +Q+++QIR I R  +VP  G +CDLLWSD
Sbjct: 140 WRYCTEIFDYLSLSAIIDGKIFCVHGGLSPSIQTLDQIRTIDRKQEVPHDGPMCDLLWSD 199

Query: 725 PDKDVQGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFS 904
           P+ D  GWG + RG  + FG++VVA+F   +D+D+ICRAHQ+V +GY++     ++T++S
Sbjct: 200 PE-DTTGWGVSPRGAGYLFGSDVVAQFNAANDIDMICRAHQLVMEGYKWHFNETVLTVWS 258

Query: 905 APNYCGEFDNAGAMMSVDETLMCSFQILKPA 997
           APNYC    N  A++ +DE L   F I + A
Sbjct: 259 APNYCYRCGNVAAILELDEHLQKDFIIFEAA 289


>ref|NP_001124222.1| serine/threonine-protein phosphatase 6 catalytic subunit [Bos
           taurus].
          Length = 305

 Score =  267 bits (683), Expect = 1e-71
 Identities = 123/255 (48%), Positives = 176/255 (69%), Gaps = 1/255 (0%)
 Frame = +2

Query: 188 LTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLF 367
           L EN+++ LC    ++ L +  +  +  P+ +CGDIHGQ+YDL  LF  GG  P++NY+F
Sbjct: 19  LPENDLKRLCDYVCDLLLEESNVQPVSTPVTVCGDIHGQFYDLCELFRTGGQVPDTNYIF 78

Query: 368 LGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIKL 544
           +GD+VDRG  SLET   LLA K K+P+   LLRGNHE   I ++YGFYDEC+ +Y N   
Sbjct: 79  MGDFVDRGYYSLETFTYLLALKAKWPDRITLLRGNHESRQITQVYGFYDECQTKYGNANA 138

Query: 545 WKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSD 724
           W+  T  F+ L +AA++DE+I C HGGLSPD+++++QIR I R  ++P +G  CDL+WSD
Sbjct: 139 WRYCTKVFDMLTVAALIDEQILCVHGGLSPDIKTLDQIRTIERNQEIPHKGAFCDLVWSD 198

Query: 725 PDKDVQGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFS 904
           P+ DV  W  + RG  + FGA+V  +F+H ++L LICRAHQ+V +GY+F    +LVT++S
Sbjct: 199 PE-DVDTWAISPRGAGWLFGAKVTNEFVHINNLKLICRAHQLVHEGYKFMFDEKLVTVWS 257

Query: 905 APNYCGEFDNAGAMM 949
           APNYC    N  ++M
Sbjct: 258 APNYCYRCGNIASIM 272


>ref|NP_777212.1| serine/threonine-protein phosphatase 2B catalytic subunit alpha
           isoform [Bos taurus].
          Length = 521

 Score =  225 bits (574), Expect = 5e-59
 Identities = 110/278 (39%), Positives = 170/278 (61%), Gaps = 13/278 (4%)
 Frame = +2

Query: 176 KNVQLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPES 355
           K  +L E     +  +   I   +  LL+++AP+ +CGDIHGQ++DL++LFE GG P  +
Sbjct: 52  KEGRLEETVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANT 111

Query: 356 NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYN 535
            YLFLGDYVDRG  S+E +  L A KI YP+  FLLRGNHEC  +   + F  ECK +Y+
Sbjct: 112 RYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYS 171

Query: 536 IKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLL 715
            +++    D F+CLP+AA+++++  C HGGLSP++ +++ IR++ R  + P  G +CD+L
Sbjct: 172 ERVYDACMDAFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMCDIL 231

Query: 716 WSDP------DKDVQGWGEND-RGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFF 874
           WSDP      +K  + +  N  RG S+ +    V +FL  ++L  I RAH+  + GY  +
Sbjct: 232 WSDPLEDFGNEKTQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQDAGYRMY 291

Query: 875 AKRQ------LVTLFSAPNYCGEFDNAGAMMSVDETLM 970
            K Q      L+T+FSAPNY   ++N  A++  +  +M
Sbjct: 292 RKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNVM 329


  Database: RefSeq49_BP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 17,681,374
  Number of sequences in database:  33,088
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 50,413,633
Number of extensions: 1594190
Number of successful extensions: 7871
Number of sequences better than 1.0e-05: 18
Number of HSP's gapped: 7616
Number of HSP's successfully gapped: 22
Length of query: 397
Length of database: 17,681,374
Length adjustment: 104
Effective length of query: 293
Effective length of database: 14,240,222
Effective search space: 4172385046
Effective search space used: 4172385046
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

Search to RefSeqCP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-002996
         (1193 letters)

Database: RefSeq49_CP.fasta 
           33,336 sequences; 18,874,504 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001003064.1| serine/threonine-protein phosphatase PP1-alp...   670   0.0  
Alignment   gi|NP_001003033.1| serine/threonine-protein phosphatase PP1-gam...   608   e-174
Alignment   gi|NP_001003034.1| serine/threonine-protein phosphatase PP1-bet...   598   e-171
Alignment   gi|XP_539988.1| PREDICTED: similar to Serine/threonine protein ...   300   2e-81
Alignment   gi|XP_858531.1| PREDICTED: similar to Serine/threonine protein ...   295   8e-80
Alignment   gi|NP_001003063.1| serine/threonine-protein phosphatase 2A cata...   294   1e-79
Alignment   gi|XP_547067.1| PREDICTED: similar to Serine/threonine protein ...   293   2e-79
Alignment   gi|XP_858953.1| PREDICTED: similar to Serine/threonine protein ...   288   9e-78
Alignment   gi|XP_858996.1| PREDICTED: similar to Serine/threonine protein ...   286   3e-77
Alignment   gi|XP_858914.1| PREDICTED: similar to Serine/threonine protein ...   267   1e-71

>ref|NP_001003064.1| serine/threonine-protein phosphatase PP1-alpha catalytic subunit
            [Canis lupus familiaris].
          Length = 330

 Score =  670 bits (1728), Expect = 0.0
 Identities = 322/325 (99%), Positives = 322/325 (99%)
 Frame = +2

Query: 101  MSDSEKLNLDSIIGRLLEVQGSRPGKNVQLTENEIRGLCLKSREIFLSQPILLELEAPLK 280
            MSDSEKLNLDSIIGRLLEVQGSRPGKNVQLTENEIRGLCLKSREIFLSQPILLELEAPLK
Sbjct: 1    MSDSEKLNLDSIIGRLLEVQGSRPGKNVQLTENEIRGLCLKSREIFLSQPILLELEAPLK 60

Query: 281  ICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 460
            ICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL
Sbjct: 61   ICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 120

Query: 461  LRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDL 640
            LRGNHECASINRIYGFYDECKRRYNIKLWKTFTD FN LPIAAIVDEKIFCCHGGLSPDL
Sbjct: 121  LRGNHECASINRIYGFYDECKRRYNIKLWKTFTDXFNXLPIAAIVDEKIFCCHGGLSPDL 180

Query: 641  QSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKFLHKHD 820
            QSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKFLHKHD
Sbjct: 181  QSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKFLHKHD 240

Query: 821  LDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAD 1000
            LDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAD
Sbjct: 241  LDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAD 300

Query: 1001 XNKGKYGQFSGLNPGGRPITPPRNS 1075
             NKGKYGQFSGLNPGGRPITPPRNS
Sbjct: 301  KNKGKYGQFSGLNPGGRPITPPRNS 325


>ref|NP_001003033.1| serine/threonine-protein phosphatase PP1-gamma catalytic subunit
            [Canis lupus familiaris].
          Length = 323

 Score =  608 bits (1567), Expect = e-174
 Identities = 294/323 (91%), Positives = 301/323 (93%)
 Frame = +2

Query: 101  MSDSEKLNLDSIIGRLLEVQGSRPGKNVQLTENEIRGLCLKSREIFLSQPILLELEAPLK 280
            M+D +KLN+DSII RLLEV+GS+PGKNVQL ENEIRGLCLKSREIFLSQPILLELEAPLK
Sbjct: 1    MADIDKLNIDSIIQRLLEVRGSKPGKNVQLQENEIRGLCLKSREIFLSQPILLELEAPLK 60

Query: 281  ICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 460
            ICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL
Sbjct: 61   ICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 120

Query: 461  LRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDL 640
            LRGNHEC SINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDL
Sbjct: 121  LRGNHECVSINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDL 180

Query: 641  QSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKFLHKHD 820
            QSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDV GWGE DRGVSFTFGAEVVAKFLHKHD
Sbjct: 181  QSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVLGWGETDRGVSFTFGAEVVAKFLHKHD 240

Query: 821  LDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAD 1000
            LDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPA+
Sbjct: 241  LDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAE 300

Query: 1001 XNKGKYGQFSGLNPGGRPITPPR 1069
              K             RP+TP R
Sbjct: 301  KKKPN---------ATRPVTPLR 314


>ref|NP_001003034.1| serine/threonine-protein phosphatase PP1-beta catalytic subunit
            [Canis lupus familiaris].
          Length = 327

 Score =  598 bits (1541), Expect = e-171
 Identities = 289/323 (89%), Positives = 306/323 (94%)
 Frame = +2

Query: 101  MSDSEKLNLDSIIGRLLEVQGSRPGKNVQLTENEIRGLCLKSREIFLSQPILLELEAPLK 280
            M+D E LN+DS+I RLLEV+G RPGK VQ+TE E+RGLC+KSREIFLSQPILLELEAPLK
Sbjct: 1    MADGE-LNVDSLITRLLEVRGCRPGKIVQMTEAEVRGLCIKSREIFLSQPILLELEAPLK 59

Query: 281  ICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 460
            ICGDIHGQY DLLRLFEYGGFPPE+NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL
Sbjct: 60   ICGDIHGQYADLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 119

Query: 461  LRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDL 640
            LRGNHECASINRIYGFYDECKRR+NIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDL
Sbjct: 120  LRGNHECASINRIYGFYDECKRRFNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDL 179

Query: 641  QSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKFLHKHD 820
            QSMEQIRRIMRPTDVPD GLLCDLLWSDPDKDVQGWGENDRGVSFTFGA+VV+KFL++HD
Sbjct: 180  QSMEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWGENDRGVSFTFGADVVSKFLNRHD 239

Query: 821  LDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAD 1000
            LDLICRAHQVVEDGYEFFAKRQLV LFSAPNYCGEFDNAG MMSVDETLMCSFQILKP++
Sbjct: 240  LDLICRAHQVVEDGYEFFAKRQLVILFSAPNYCGEFDNAGGMMSVDETLMCSFQILKPSE 299

Query: 1001 XNKGKYGQFSGLNPGGRPITPPR 1069
              K KY Q+ GLN  GRP+TPPR
Sbjct: 300  -KKAKY-QYGGLN-SGRPVTPPR 319


>ref|XP_539988.1| PREDICTED: similar to Serine/threonine protein phosphatase 2A,
           catalytic subunit, beta isoform (PP2A-beta) isoform 1
           [Canis familiaris].
          Length = 309

 Score =  300 bits (767), Expect = 2e-81
 Identities = 138/272 (50%), Positives = 190/272 (69%), Gaps = 1/272 (0%)
 Frame = +2

Query: 185 QLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYL 364
           QL EN++R LC K++EI   +  + E+  P+ +CGD+HGQ++DL+ LF  GG  P++NYL
Sbjct: 22  QLNENQVRTLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYL 81

Query: 365 FLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIK 541
           F+GDYVDRG  S+ET+ LL+A K++YPE   +LRGNHE   I ++YGFYDEC R+Y N  
Sbjct: 82  FMGDYVDRGYYSVETVTLLVALKVRYPERITILRGNHESRQITQVYGFYDECLRKYGNAN 141

Query: 542 LWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWS 721
           +WK FTD F+ LP+ A+VD +IFC HGGLSP + +++ IR + R  +VP +G +CDLLWS
Sbjct: 142 VWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEGPMCDLLWS 201

Query: 722 DPDKDVQGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLF 901
           DPD D  GWG + RG  +TFG ++   F H + L L+ RAHQ+V +GY +   R +VT+F
Sbjct: 202 DPD-DRGGWGISPRGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGYNWCHDRNVVTIF 260

Query: 902 SAPNYCGEFDNAGAMMSVDETLMCSFQILKPA 997
           SAPNYC    N  A+M +D+TL  SF    PA
Sbjct: 261 SAPNYCYRCGNQAAIMELDDTLKYSFLQFDPA 292


>ref|XP_858531.1| PREDICTED: similar to Serine/threonine protein phosphatase 2A,
           catalytic subunit, beta isoform (PP2A-beta) isoform 4
           [Canis familiaris].
          Length = 311

 Score =  295 bits (754), Expect = 8e-80
 Identities = 138/274 (50%), Positives = 190/274 (69%), Gaps = 3/274 (1%)
 Frame = +2

Query: 185 QLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYL 364
           QL EN++R LC K++EI   +  + E+  P+ +CGD+HGQ++DL+ LF  GG  P++NYL
Sbjct: 22  QLNENQVRTLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYL 81

Query: 365 FLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIK 541
           F+GDYVDRG  S+ET+ LL+A K++YPE   +LRGNHE   I ++YGFYDEC R+Y N  
Sbjct: 82  FMGDYVDRGYYSVETVTLLVALKVRYPERITILRGNHESRQITQVYGFYDECLRKYGNAN 141

Query: 542 LWKTFTDCFNCLPIAAIVDEK--IFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLL 715
           +WK FTD F+ LP+ A+VD +  IFC HGGLSP + +++ IR + R  +VP +G +CDLL
Sbjct: 142 VWKYFTDLFDYLPLTALVDGQPGIFCLHGGLSPSIDTLDHIRALDRLQEVPHEGPMCDLL 201

Query: 716 WSDPDKDVQGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVT 895
           WSDPD D  GWG + RG  +TFG ++   F H + L L+ RAHQ+V +GY +   R +VT
Sbjct: 202 WSDPD-DRGGWGISPRGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGYNWCHDRNVVT 260

Query: 896 LFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPA 997
           +FSAPNYC    N  A+M +D+TL  SF    PA
Sbjct: 261 IFSAPNYCYRCGNQAAIMELDDTLKYSFLQFDPA 294


>ref|NP_001003063.1| serine/threonine-protein phosphatase 2A catalytic subunit alpha
           isoform [Canis lupus familiaris].
          Length = 309

 Score =  294 bits (752), Expect = 1e-79
 Identities = 135/272 (49%), Positives = 190/272 (69%), Gaps = 1/272 (0%)
 Frame = +2

Query: 185 QLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYL 364
           QL+E++++ LC K++EI   +  + E+  P+ +CGD+HGQ++DL+ LF  GG  P++NYL
Sbjct: 22  QLSESQVKSLCEKAKEILTRESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYL 81

Query: 365 FLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIK 541
           F+GDYVDRG  S+ET+ LL+A K++Y E   +LRGNHE   I ++YGFYDEC R+Y N  
Sbjct: 82  FMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNAN 141

Query: 542 LWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWS 721
           +WK FTD F+ LP+ A+VD +IFC HGGLSP + +++ IR + R  +VP +G +CDLLWS
Sbjct: 142 VWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEGPMCDLLWS 201

Query: 722 DPDKDVQGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLF 901
           DPD D  GWG + RG  +TFG ++   F H + L L+ RAHQ+V +GY +   R +VT+F
Sbjct: 202 DPD-DRGGWGISPRGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGYNWCHDRNVVTIF 260

Query: 902 SAPNYCGEFDNAGAMMSVDETLMCSFQILKPA 997
           SAPNYC    N  A+M +D+TL  SF    PA
Sbjct: 261 SAPNYCYRCGNQAAIMELDDTLKYSFLQFDPA 292


>ref|XP_547067.1| PREDICTED: similar to Serine/threonine protein phosphatase 4
           catalytic subunit (PP4C) (Pp4) (Protein phosphatase X)
           (PP-X) isoform 1 [Canis familiaris].
          Length = 307

 Score =  293 bits (750), Expect = 2e-79
 Identities = 133/271 (49%), Positives = 194/271 (71%), Gaps = 1/271 (0%)
 Frame = +2

Query: 188 LTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLF 367
           + E+E++ LC K+REI + +  +  +++P+ +CGDIHGQ+YDL  LF  GG  PE+NYLF
Sbjct: 20  IKESEVKALCAKAREILVEESNVQRVDSPVTVCGDIHGQFYDLKELFRVGGDVPETNYLF 79

Query: 368 LGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIKL 544
           +GD+VDRG  S+ET  LLLA K++YP+   L+RGNHE   I ++YGFYDEC R+Y ++ +
Sbjct: 80  MGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVTV 139

Query: 545 WKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSD 724
           W+  T+ F+ L ++AI+D KIFC HGGLSP +Q+++QIR I R  +VP  G +CDLLWSD
Sbjct: 140 WRYCTEIFDYLSLSAIIDGKIFCVHGGLSPSIQTLDQIRTIDRKQEVPHDGPMCDLLWSD 199

Query: 725 PDKDVQGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFS 904
           P+ D  GWG + RG  + FG++VVA+F   +D+D+ICRAHQ+V +GY++     ++T++S
Sbjct: 200 PE-DTTGWGVSPRGAGYLFGSDVVAQFNAANDIDMICRAHQLVMEGYKWHFNETVLTVWS 258

Query: 905 APNYCGEFDNAGAMMSVDETLMCSFQILKPA 997
           APNYC    N  A++ +DE L   F I + A
Sbjct: 259 APNYCYRCGNVAAILELDEHLQKDFIIFEAA 289


>ref|XP_858953.1| PREDICTED: similar to Serine/threonine protein phosphatase 4
           catalytic subunit (PP4C) (Pp4) (Protein phosphatase X)
           (PP-X) isoform 4 [Canis familiaris].
          Length = 324

 Score =  288 bits (736), Expect = 9e-78
 Identities = 133/287 (46%), Positives = 195/287 (67%), Gaps = 17/287 (5%)
 Frame = +2

Query: 188 LTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLF 367
           + E+E++ LC K+REI + +  +  +++P+ +CGDIHGQ+YDL  LF  GG  PE+NYLF
Sbjct: 20  IKESEVKALCAKAREILVEESNVQRVDSPVTVCGDIHGQFYDLKELFRVGGDVPETNYLF 79

Query: 368 LGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIKL 544
           +GD+VDRG  S+ET  LLLA K++YP+   L+RGNHE   I ++YGFYDEC R+Y ++ +
Sbjct: 80  MGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVTV 139

Query: 545 WKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSD 724
           W+  T+ F+ L ++AI+D KIFC HGGLSP +Q+++QIR I R  +VP  G +CDLLWSD
Sbjct: 140 WRYCTEIFDYLSLSAIIDGKIFCVHGGLSPSIQTLDQIRTIDRKQEVPHDGPMCDLLWSD 199

Query: 725 PDK----------------DVQGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVE 856
           P++                D  GWG + RG  + FG++VVA+F   +D+D+ICRAHQ+V 
Sbjct: 200 PEEKPGGHPLPPSLPSFASDTTGWGVSPRGAGYLFGSDVVAQFNAANDIDMICRAHQLVM 259

Query: 857 DGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPA 997
           +GY++     ++T++SAPNYC    N  A++ +DE L   F I + A
Sbjct: 260 EGYKWHFNETVLTVWSAPNYCYRCGNVAAILELDEHLQKDFIIFEAA 306


>ref|XP_858996.1| PREDICTED: similar to Serine/threonine protein phosphatase 4
           catalytic subunit (PP4C) (Pp4) (Protein phosphatase X)
           (PP-X) isoform 5 [Canis familiaris].
          Length = 308

 Score =  286 bits (732), Expect = 3e-77
 Identities = 129/271 (47%), Positives = 192/271 (70%), Gaps = 1/271 (0%)
 Frame = +2

Query: 188 LTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLF 367
           + E+E++ LC K+REI + +  +  +++P+ +CGDIHGQ+YDL  LF  GG  PE+NYLF
Sbjct: 20  IKESEVKALCAKAREILVEESNVQRVDSPVTVCGDIHGQFYDLKELFRVGGDVPETNYLF 79

Query: 368 LGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIKL 544
           +GD+VDRG  S+ET  LLLA K++YP+   L+RGNHE   I ++YGFYDEC R+Y ++ +
Sbjct: 80  MGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVTV 139

Query: 545 WKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSD 724
           W+  T+ F+ L ++AI+D KIFC HGGLSP +Q+++QIR I R  +VP  G +CDLLWSD
Sbjct: 140 WRYCTEIFDYLSLSAIIDGKIFCVHGGLSPSIQTLDQIRTIDRKQEVPHDGPMCDLLWSD 199

Query: 725 PDKDVQGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFS 904
           P+ +   +  + RG  + FG++VVA+F   +D+D+ICRAHQ+V +GY++     ++T++S
Sbjct: 200 PEGEENSFSLDPRGAGYLFGSDVVAQFNAANDIDMICRAHQLVMEGYKWHFNETVLTVWS 259

Query: 905 APNYCGEFDNAGAMMSVDETLMCSFQILKPA 997
           APNYC    N  A++ +DE L   F I + A
Sbjct: 260 APNYCYRCGNVAAILELDEHLQKDFIIFEAA 290


>ref|XP_858914.1| PREDICTED: similar to Serine/threonine protein phosphatase 4
           catalytic subunit (PP4C) (Pp4) (Protein phosphatase X)
           (PP-X) isoform 3 [Canis familiaris].
          Length = 295

 Score =  267 bits (683), Expect = 1e-71
 Identities = 124/271 (45%), Positives = 184/271 (67%), Gaps = 1/271 (0%)
 Frame = +2

Query: 188 LTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLF 367
           + E+E++ LC K+REI + +  +  +++P+ +CGDIHGQ+YDL  LF  GG  PE+NYLF
Sbjct: 20  IKESEVKALCAKAREILVEESNVQRVDSPVTVCGDIHGQFYDLKELFRVGGDVPETNYLF 79

Query: 368 LGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIKL 544
           +GD+VDRG  S+ET  LLLA K++YP+   L+RGNHE   I ++YGFYDEC R+Y ++ +
Sbjct: 80  MGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVTV 139

Query: 545 WKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSD 724
           W+  T+ F+ L ++AI+D KIFC HGGLSP +Q+++QIR I R  +VP  G +C      
Sbjct: 140 WRYCTEIFDYLSLSAIIDGKIFCVHGGLSPSIQTLDQIRTIDRKQEVPHDGPMC------ 193

Query: 725 PDKDVQGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFS 904
                  WG + RG  + FG++VVA+F   +D+D+ICRAHQ+V +GY++     ++T++S
Sbjct: 194 -------WGVSPRGAGYLFGSDVVAQFNAANDIDMICRAHQLVMEGYKWHFNETVLTVWS 246

Query: 905 APNYCGEFDNAGAMMSVDETLMCSFQILKPA 997
           APNYC    N  A++ +DE L   F I + A
Sbjct: 247 APNYCYRCGNVAAILELDEHLQKDFIIFEAA 277


  Database: RefSeq49_CP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,874,504
  Number of sequences in database:  33,336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 52,563,130
Number of extensions: 1638339
Number of successful extensions: 8160
Number of sequences better than 1.0e-05: 34
Number of HSP's gapped: 7983
Number of HSP's successfully gapped: 37
Length of query: 397
Length of database: 18,874,504
Length adjustment: 105
Effective length of query: 292
Effective length of database: 15,374,224
Effective search space: 4489273408
Effective search space used: 4489273408
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

Search to RefSeqHP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-002996
         (1193 letters)

Database: RefSeq49_HP.fasta 
           32,964 sequences; 18,297,164 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_002699.1| serine/threonine-protein phosphatase PP1-alpha ...   677   0.0  
Alignment   gi|NP_001008709.1| serine/threonine-protein phosphatase PP1-alp...   669   0.0  
Alignment   gi|NP_002701.1| serine/threonine-protein phosphatase PP1-gamma ...   615   e-176
Alignment   gi|NP_996759.1| serine/threonine-protein phosphatase PP1-beta c...   600   e-172
Alignment   gi|NP_002700.1| serine/threonine-protein phosphatase PP1-beta c...   600   e-172
Alignment   gi|NP_996756.1| serine/threonine-protein phosphatase PP1-alpha ...   571   e-163
Alignment   gi|NP_001009552.1| serine/threonine-protein phosphatase 2A cata...   300   2e-81
Alignment   gi|NP_002706.1| serine/threonine-protein phosphatase 2A catalyt...   294   1e-79
Alignment   gi|NP_002711.1| serine/threonine-protein phosphatase 4 catalyti...   293   2e-79
Alignment   gi|NP_002712.1| serine/threonine-protein phosphatase 6 catalyti...   267   1e-71

>ref|NP_002699.1| serine/threonine-protein phosphatase PP1-alpha catalytic subunit
            isoform 1 [Homo sapiens].
          Length = 330

 Score =  677 bits (1748), Expect = 0.0
 Identities = 324/325 (99%), Positives = 324/325 (99%)
 Frame = +2

Query: 101  MSDSEKLNLDSIIGRLLEVQGSRPGKNVQLTENEIRGLCLKSREIFLSQPILLELEAPLK 280
            MSDSEKLNLDSIIGRLLEVQGSRPGKNVQLTENEIRGLCLKSREIFLSQPILLELEAPLK
Sbjct: 1    MSDSEKLNLDSIIGRLLEVQGSRPGKNVQLTENEIRGLCLKSREIFLSQPILLELEAPLK 60

Query: 281  ICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 460
            ICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL
Sbjct: 61   ICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 120

Query: 461  LRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDL 640
            LRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDL
Sbjct: 121  LRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDL 180

Query: 641  QSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKFLHKHD 820
            QSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKFLHKHD
Sbjct: 181  QSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKFLHKHD 240

Query: 821  LDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAD 1000
            LDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAD
Sbjct: 241  LDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAD 300

Query: 1001 XNKGKYGQFSGLNPGGRPITPPRNS 1075
             NKGKYGQFSGLNPGGRPITPPRNS
Sbjct: 301  KNKGKYGQFSGLNPGGRPITPPRNS 325


>ref|NP_001008709.1| serine/threonine-protein phosphatase PP1-alpha catalytic subunit
            isoform 3 [Homo sapiens].
          Length = 341

 Score =  669 bits (1726), Expect = 0.0
 Identities = 324/336 (96%), Positives = 324/336 (96%), Gaps = 11/336 (3%)
 Frame = +2

Query: 101  MSDSEKLNLDSIIGRLLE-----------VQGSRPGKNVQLTENEIRGLCLKSREIFLSQ 247
            MSDSEKLNLDSIIGRLLE           VQGSRPGKNVQLTENEIRGLCLKSREIFLSQ
Sbjct: 1    MSDSEKLNLDSIIGRLLEGSRVLTPHCAPVQGSRPGKNVQLTENEIRGLCLKSREIFLSQ 60

Query: 248  PILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLA 427
            PILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLA
Sbjct: 61   PILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLA 120

Query: 428  YKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIVDEKI 607
            YKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIVDEKI
Sbjct: 121  YKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIVDEKI 180

Query: 608  FCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGA 787
            FCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGA
Sbjct: 181  FCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGA 240

Query: 788  EVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETL 967
            EVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETL
Sbjct: 241  EVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETL 300

Query: 968  MCSFQILKPADXNKGKYGQFSGLNPGGRPITPPRNS 1075
            MCSFQILKPAD NKGKYGQFSGLNPGGRPITPPRNS
Sbjct: 301  MCSFQILKPADKNKGKYGQFSGLNPGGRPITPPRNS 336


>ref|NP_002701.1| serine/threonine-protein phosphatase PP1-gamma catalytic subunit
            [Homo sapiens].
          Length = 323

 Score =  615 bits (1587), Expect = e-176
 Identities = 297/323 (91%), Positives = 304/323 (94%)
 Frame = +2

Query: 101  MSDSEKLNLDSIIGRLLEVQGSRPGKNVQLTENEIRGLCLKSREIFLSQPILLELEAPLK 280
            M+D +KLN+DSII RLLEV+GS+PGKNVQL ENEIRGLCLKSREIFLSQPILLELEAPLK
Sbjct: 1    MADLDKLNIDSIIQRLLEVRGSKPGKNVQLQENEIRGLCLKSREIFLSQPILLELEAPLK 60

Query: 281  ICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 460
            ICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL
Sbjct: 61   ICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 120

Query: 461  LRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDL 640
            LRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDL
Sbjct: 121  LRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDL 180

Query: 641  QSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKFLHKHD 820
            QSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDV GWGENDRGVSFTFGAEVVAKFLHKHD
Sbjct: 181  QSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVLGWGENDRGVSFTFGAEVVAKFLHKHD 240

Query: 821  LDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAD 1000
            LDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPA+
Sbjct: 241  LDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAE 300

Query: 1001 XNKGKYGQFSGLNPGGRPITPPR 1069
              K             RP+TPPR
Sbjct: 301  KKKPN---------ATRPVTPPR 314


>ref|NP_996759.1| serine/threonine-protein phosphatase PP1-beta catalytic subunit
            isoform 1 [Homo sapiens].
          Length = 327

 Score =  600 bits (1548), Expect = e-172
 Identities = 290/325 (89%), Positives = 308/325 (94%)
 Frame = +2

Query: 101  MSDSEKLNLDSIIGRLLEVQGSRPGKNVQLTENEIRGLCLKSREIFLSQPILLELEAPLK 280
            M+D E LN+DS+I RLLEV+G RPGK VQ+TE E+RGLC+KSREIFLSQPILLELEAPLK
Sbjct: 1    MADGE-LNVDSLITRLLEVRGCRPGKIVQMTEAEVRGLCIKSREIFLSQPILLELEAPLK 59

Query: 281  ICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 460
            ICGDIHGQY DLLRLFEYGGFPPE+NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL
Sbjct: 60   ICGDIHGQYTDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 119

Query: 461  LRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDL 640
            LRGNHECASINRIYGFYDECKRR+NIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDL
Sbjct: 120  LRGNHECASINRIYGFYDECKRRFNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDL 179

Query: 641  QSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKFLHKHD 820
            QSMEQIRRIMRPTDVPD GLLCDLLWSDPDKDVQGWGENDRGVSFTFGA+VV+KFL++HD
Sbjct: 180  QSMEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWGENDRGVSFTFGADVVSKFLNRHD 239

Query: 821  LDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAD 1000
            LDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAG MMSVDETLMCSFQILKP++
Sbjct: 240  LDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGGMMSVDETLMCSFQILKPSE 299

Query: 1001 XNKGKYGQFSGLNPGGRPITPPRNS 1075
              K KY Q+ GLN  GRP+TPPR +
Sbjct: 300  -KKAKY-QYGGLN-SGRPVTPPRTA 321


>ref|NP_002700.1| serine/threonine-protein phosphatase PP1-beta catalytic subunit
            isoform 1 [Homo sapiens].
          Length = 327

 Score =  600 bits (1548), Expect = e-172
 Identities = 290/325 (89%), Positives = 308/325 (94%)
 Frame = +2

Query: 101  MSDSEKLNLDSIIGRLLEVQGSRPGKNVQLTENEIRGLCLKSREIFLSQPILLELEAPLK 280
            M+D E LN+DS+I RLLEV+G RPGK VQ+TE E+RGLC+KSREIFLSQPILLELEAPLK
Sbjct: 1    MADGE-LNVDSLITRLLEVRGCRPGKIVQMTEAEVRGLCIKSREIFLSQPILLELEAPLK 59

Query: 281  ICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 460
            ICGDIHGQY DLLRLFEYGGFPPE+NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL
Sbjct: 60   ICGDIHGQYTDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 119

Query: 461  LRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDL 640
            LRGNHECASINRIYGFYDECKRR+NIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDL
Sbjct: 120  LRGNHECASINRIYGFYDECKRRFNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDL 179

Query: 641  QSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKFLHKHD 820
            QSMEQIRRIMRPTDVPD GLLCDLLWSDPDKDVQGWGENDRGVSFTFGA+VV+KFL++HD
Sbjct: 180  QSMEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWGENDRGVSFTFGADVVSKFLNRHD 239

Query: 821  LDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAD 1000
            LDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAG MMSVDETLMCSFQILKP++
Sbjct: 240  LDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGGMMSVDETLMCSFQILKPSE 299

Query: 1001 XNKGKYGQFSGLNPGGRPITPPRNS 1075
              K KY Q+ GLN  GRP+TPPR +
Sbjct: 300  -KKAKY-QYGGLN-SGRPVTPPRTA 321


>ref|NP_996756.1| serine/threonine-protein phosphatase PP1-alpha catalytic subunit
            isoform 2 [Homo sapiens].
          Length = 286

 Score =  571 bits (1471), Expect = e-163
 Identities = 280/325 (86%), Positives = 280/325 (86%)
 Frame = +2

Query: 101  MSDSEKLNLDSIIGRLLEVQGSRPGKNVQLTENEIRGLCLKSREIFLSQPILLELEAPLK 280
            MSDSEKLNLDSIIGRLLE                                          
Sbjct: 1    MSDSEKLNLDSIIGRLLE------------------------------------------ 18

Query: 281  ICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 460
              GDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL
Sbjct: 19   --GDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 76

Query: 461  LRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDL 640
            LRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDL
Sbjct: 77   LRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDL 136

Query: 641  QSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKFLHKHD 820
            QSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKFLHKHD
Sbjct: 137  QSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKFLHKHD 196

Query: 821  LDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAD 1000
            LDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAD
Sbjct: 197  LDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAD 256

Query: 1001 XNKGKYGQFSGLNPGGRPITPPRNS 1075
             NKGKYGQFSGLNPGGRPITPPRNS
Sbjct: 257  KNKGKYGQFSGLNPGGRPITPPRNS 281


>ref|NP_001009552.1| serine/threonine-protein phosphatase 2A catalytic subunit beta
           isoform [Homo sapiens].
          Length = 309

 Score =  300 bits (767), Expect = 2e-81
 Identities = 138/272 (50%), Positives = 190/272 (69%), Gaps = 1/272 (0%)
 Frame = +2

Query: 185 QLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYL 364
           QL EN++R LC K++EI   +  + E+  P+ +CGD+HGQ++DL+ LF  GG  P++NYL
Sbjct: 22  QLNENQVRTLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYL 81

Query: 365 FLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIK 541
           F+GDYVDRG  S+ET+ LL+A K++YPE   +LRGNHE   I ++YGFYDEC R+Y N  
Sbjct: 82  FMGDYVDRGYYSVETVTLLVALKVRYPERITILRGNHESRQITQVYGFYDECLRKYGNAN 141

Query: 542 LWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWS 721
           +WK FTD F+ LP+ A+VD +IFC HGGLSP + +++ IR + R  +VP +G +CDLLWS
Sbjct: 142 VWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEGPMCDLLWS 201

Query: 722 DPDKDVQGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLF 901
           DPD D  GWG + RG  +TFG ++   F H + L L+ RAHQ+V +GY +   R +VT+F
Sbjct: 202 DPD-DRGGWGISPRGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGYNWCHDRNVVTIF 260

Query: 902 SAPNYCGEFDNAGAMMSVDETLMCSFQILKPA 997
           SAPNYC    N  A+M +D+TL  SF    PA
Sbjct: 261 SAPNYCYRCGNQAAIMELDDTLKYSFLQFDPA 292


>ref|NP_002706.1| serine/threonine-protein phosphatase 2A catalytic subunit alpha
           isoform [Homo sapiens].
          Length = 309

 Score =  294 bits (753), Expect = 1e-79
 Identities = 135/272 (49%), Positives = 190/272 (69%), Gaps = 1/272 (0%)
 Frame = +2

Query: 185 QLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYL 364
           QL+E++++ LC K++EI   +  + E+  P+ +CGD+HGQ++DL+ LF  GG  P++NYL
Sbjct: 22  QLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYL 81

Query: 365 FLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIK 541
           F+GDYVDRG  S+ET+ LL+A K++Y E   +LRGNHE   I ++YGFYDEC R+Y N  
Sbjct: 82  FMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNAN 141

Query: 542 LWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWS 721
           +WK FTD F+ LP+ A+VD +IFC HGGLSP + +++ IR + R  +VP +G +CDLLWS
Sbjct: 142 VWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEGPMCDLLWS 201

Query: 722 DPDKDVQGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLF 901
           DPD D  GWG + RG  +TFG ++   F H + L L+ RAHQ+V +GY +   R +VT+F
Sbjct: 202 DPD-DRGGWGISPRGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGYNWCHDRNVVTIF 260

Query: 902 SAPNYCGEFDNAGAMMSVDETLMCSFQILKPA 997
           SAPNYC    N  A+M +D+TL  SF    PA
Sbjct: 261 SAPNYCYRCGNQAAIMELDDTLKYSFLQFDPA 292


>ref|NP_002711.1| serine/threonine-protein phosphatase 4 catalytic subunit [Homo
           sapiens].
          Length = 307

 Score =  293 bits (750), Expect = 2e-79
 Identities = 133/271 (49%), Positives = 194/271 (71%), Gaps = 1/271 (0%)
 Frame = +2

Query: 188 LTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLF 367
           + E+E++ LC K+REI + +  +  +++P+ +CGDIHGQ+YDL  LF  GG  PE+NYLF
Sbjct: 20  IKESEVKALCAKAREILVEESNVQRVDSPVTVCGDIHGQFYDLKELFRVGGDVPETNYLF 79

Query: 368 LGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIKL 544
           +GD+VDRG  S+ET  LLLA K++YP+   L+RGNHE   I ++YGFYDEC R+Y ++ +
Sbjct: 80  MGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVTV 139

Query: 545 WKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSD 724
           W+  T+ F+ L ++AI+D KIFC HGGLSP +Q+++QIR I R  +VP  G +CDLLWSD
Sbjct: 140 WRYCTEIFDYLSLSAIIDGKIFCVHGGLSPSIQTLDQIRTIDRKQEVPHDGPMCDLLWSD 199

Query: 725 PDKDVQGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFS 904
           P+ D  GWG + RG  + FG++VVA+F   +D+D+ICRAHQ+V +GY++     ++T++S
Sbjct: 200 PE-DTTGWGVSPRGAGYLFGSDVVAQFNAANDIDMICRAHQLVMEGYKWHFNETVLTVWS 258

Query: 905 APNYCGEFDNAGAMMSVDETLMCSFQILKPA 997
           APNYC    N  A++ +DE L   F I + A
Sbjct: 259 APNYCYRCGNVAAILELDEHLQKDFIIFEAA 289


>ref|NP_002712.1| serine/threonine-protein phosphatase 6 catalytic subunit isoform b
           [Homo sapiens].
          Length = 305

 Score =  267 bits (683), Expect = 1e-71
 Identities = 123/255 (48%), Positives = 176/255 (69%), Gaps = 1/255 (0%)
 Frame = +2

Query: 188 LTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLF 367
           L EN+++ LC    ++ L +  +  +  P+ +CGDIHGQ+YDL  LF  GG  P++NY+F
Sbjct: 19  LPENDLKRLCDYVCDLLLEESNVQPVSTPVTVCGDIHGQFYDLCELFRTGGQVPDTNYIF 78

Query: 368 LGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIKL 544
           +GD+VDRG  SLET   LLA K K+P+   LLRGNHE   I ++YGFYDEC+ +Y N   
Sbjct: 79  MGDFVDRGYYSLETFTYLLALKAKWPDRITLLRGNHESRQITQVYGFYDECQTKYGNANA 138

Query: 545 WKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSD 724
           W+  T  F+ L +AA++DE+I C HGGLSPD+++++QIR I R  ++P +G  CDL+WSD
Sbjct: 139 WRYCTKVFDMLTVAALIDEQILCVHGGLSPDIKTLDQIRTIERNQEIPHKGAFCDLVWSD 198

Query: 725 PDKDVQGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFS 904
           P+ DV  W  + RG  + FGA+V  +F+H ++L LICRAHQ+V +GY+F    +LVT++S
Sbjct: 199 PE-DVDTWAISPRGAGWLFGAKVTNEFVHINNLKLICRAHQLVHEGYKFMFDEKLVTVWS 257

Query: 905 APNYCGEFDNAGAMM 949
           APNYC    N  ++M
Sbjct: 258 APNYCYRCGNIASIM 272


  Database: RefSeq49_HP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,297,164
  Number of sequences in database:  32,964
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 51,470,506
Number of extensions: 1597610
Number of successful extensions: 7463
Number of sequences better than 1.0e-05: 25
Number of HSP's gapped: 7262
Number of HSP's successfully gapped: 27
Length of query: 397
Length of database: 18,297,164
Length adjustment: 105
Effective length of query: 292
Effective length of database: 14,835,944
Effective search space: 4332095648
Effective search space used: 4332095648
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

Search to RefSeqMP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-002996
         (1193 letters)

Database: RefSeq49_MP.fasta 
           30,036 sequences; 15,617,559 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_114074.1| serine/threonine-protein phosphatase PP1-alpha ...   676   0.0  
Alignment   gi|NP_038664.2| serine/threonine-protein phosphatase PP1-gamma ...   615   e-176
Alignment   gi|NP_766295.2| serine/threonine-protein phosphatase PP1-beta c...   600   e-172
Alignment   gi|NP_059070.1| serine/threonine-protein phosphatase 2A catalyt...   300   2e-81
Alignment   gi|NP_062284.1| serine/threonine-protein phosphatase 2A catalyt...   294   8e-80
Alignment   gi|NP_062648.1| serine/threonine-protein phosphatase 4 catalyti...   293   2e-79
Alignment   gi|NP_077171.1| serine/threonine-protein phosphatase 6 catalyti...   267   1e-71
Alignment   gi|NP_032939.1| serine/threonine-protein phosphatase 2B catalyt...   225   6e-59
Alignment   gi|NP_032940.1| serine/threonine-protein phosphatase 2B catalyt...   221   7e-58
Alignment   gi|NP_032941.1| serine/threonine-protein phosphatase 2B catalyt...   220   2e-57

>ref|NP_114074.1| serine/threonine-protein phosphatase PP1-alpha catalytic subunit [Mus
            musculus].
          Length = 330

 Score =  676 bits (1745), Expect = 0.0
 Identities = 323/325 (99%), Positives = 324/325 (99%)
 Frame = +2

Query: 101  MSDSEKLNLDSIIGRLLEVQGSRPGKNVQLTENEIRGLCLKSREIFLSQPILLELEAPLK 280
            MSDSEKLNLDSIIGRLLEVQGSRPGKNVQLTENEIRGLCLKSREIFLSQPILLELEAPLK
Sbjct: 1    MSDSEKLNLDSIIGRLLEVQGSRPGKNVQLTENEIRGLCLKSREIFLSQPILLELEAPLK 60

Query: 281  ICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 460
            ICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKI+YPENFFL
Sbjct: 61   ICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIRYPENFFL 120

Query: 461  LRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDL 640
            LRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDL
Sbjct: 121  LRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDL 180

Query: 641  QSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKFLHKHD 820
            QSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKFLHKHD
Sbjct: 181  QSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKFLHKHD 240

Query: 821  LDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAD 1000
            LDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAD
Sbjct: 241  LDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAD 300

Query: 1001 XNKGKYGQFSGLNPGGRPITPPRNS 1075
             NKGKYGQFSGLNPGGRPITPPRNS
Sbjct: 301  KNKGKYGQFSGLNPGGRPITPPRNS 325


>ref|NP_038664.2| serine/threonine-protein phosphatase PP1-gamma catalytic subunit [Mus
            musculus].
          Length = 323

 Score =  615 bits (1587), Expect = e-176
 Identities = 297/323 (91%), Positives = 304/323 (94%)
 Frame = +2

Query: 101  MSDSEKLNLDSIIGRLLEVQGSRPGKNVQLTENEIRGLCLKSREIFLSQPILLELEAPLK 280
            M+D +KLN+DSII RLLEV+GS+PGKNVQL ENEIRGLCLKSREIFLSQPILLELEAPLK
Sbjct: 1    MADIDKLNIDSIIQRLLEVRGSKPGKNVQLQENEIRGLCLKSREIFLSQPILLELEAPLK 60

Query: 281  ICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 460
            ICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL
Sbjct: 61   ICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 120

Query: 461  LRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDL 640
            LRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDL
Sbjct: 121  LRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDL 180

Query: 641  QSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKFLHKHD 820
            QSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDV GWGENDRGVSFTFGAEVVAKFLHKHD
Sbjct: 181  QSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVLGWGENDRGVSFTFGAEVVAKFLHKHD 240

Query: 821  LDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAD 1000
            LDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPA+
Sbjct: 241  LDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAE 300

Query: 1001 XNKGKYGQFSGLNPGGRPITPPR 1069
              K             RP+TPPR
Sbjct: 301  KKKPN---------ATRPVTPPR 314


>ref|NP_766295.2| serine/threonine-protein phosphatase PP1-beta catalytic subunit [Mus
            musculus].
          Length = 327

 Score =  600 bits (1548), Expect = e-172
 Identities = 290/325 (89%), Positives = 308/325 (94%)
 Frame = +2

Query: 101  MSDSEKLNLDSIIGRLLEVQGSRPGKNVQLTENEIRGLCLKSREIFLSQPILLELEAPLK 280
            M+D E LN+DS+I RLLEV+G RPGK VQ+TE E+RGLC+KSREIFLSQPILLELEAPLK
Sbjct: 1    MADGE-LNVDSLITRLLEVRGCRPGKIVQMTEAEVRGLCIKSREIFLSQPILLELEAPLK 59

Query: 281  ICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 460
            ICGDIHGQY DLLRLFEYGGFPPE+NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL
Sbjct: 60   ICGDIHGQYTDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 119

Query: 461  LRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDL 640
            LRGNHECASINRIYGFYDECKRR+NIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDL
Sbjct: 120  LRGNHECASINRIYGFYDECKRRFNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDL 179

Query: 641  QSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKFLHKHD 820
            QSMEQIRRIMRPTDVPD GLLCDLLWSDPDKDVQGWGENDRGVSFTFGA+VV+KFL++HD
Sbjct: 180  QSMEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWGENDRGVSFTFGADVVSKFLNRHD 239

Query: 821  LDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAD 1000
            LDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAG MMSVDETLMCSFQILKP++
Sbjct: 240  LDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGGMMSVDETLMCSFQILKPSE 299

Query: 1001 XNKGKYGQFSGLNPGGRPITPPRNS 1075
              K KY Q+ GLN  GRP+TPPR +
Sbjct: 300  -KKAKY-QYGGLN-SGRPVTPPRTA 321


>ref|NP_059070.1| serine/threonine-protein phosphatase 2A catalytic subunit beta
           isoform [Mus musculus].
          Length = 309

 Score =  300 bits (767), Expect = 2e-81
 Identities = 138/272 (50%), Positives = 190/272 (69%), Gaps = 1/272 (0%)
 Frame = +2

Query: 185 QLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYL 364
           QL EN++R LC K++EI   +  + E+  P+ +CGD+HGQ++DL+ LF  GG  P++NYL
Sbjct: 22  QLNENQVRTLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYL 81

Query: 365 FLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIK 541
           F+GDYVDRG  S+ET+ LL+A K++YPE   +LRGNHE   I ++YGFYDEC R+Y N  
Sbjct: 82  FMGDYVDRGYYSVETVTLLVALKVRYPERITILRGNHESRQITQVYGFYDECLRKYGNAN 141

Query: 542 LWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWS 721
           +WK FTD F+ LP+ A+VD +IFC HGGLSP + +++ IR + R  +VP +G +CDLLWS
Sbjct: 142 VWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEGPMCDLLWS 201

Query: 722 DPDKDVQGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLF 901
           DPD D  GWG + RG  +TFG ++   F H + L L+ RAHQ+V +GY +   R +VT+F
Sbjct: 202 DPD-DRGGWGISPRGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGYNWCHDRNVVTIF 260

Query: 902 SAPNYCGEFDNAGAMMSVDETLMCSFQILKPA 997
           SAPNYC    N  A+M +D+TL  SF    PA
Sbjct: 261 SAPNYCYRCGNQAAIMELDDTLKYSFLQFDPA 292


>ref|NP_062284.1| serine/threonine-protein phosphatase 2A catalytic subunit alpha
           isoform [Mus musculus].
          Length = 309

 Score =  294 bits (753), Expect = 8e-80
 Identities = 135/272 (49%), Positives = 190/272 (69%), Gaps = 1/272 (0%)
 Frame = +2

Query: 185 QLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYL 364
           QL+E++++ LC K++EI   +  + E+  P+ +CGD+HGQ++DL+ LF  GG  P++NYL
Sbjct: 22  QLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYL 81

Query: 365 FLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIK 541
           F+GDYVDRG  S+ET+ LL+A K++Y E   +LRGNHE   I ++YGFYDEC R+Y N  
Sbjct: 82  FMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNAN 141

Query: 542 LWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWS 721
           +WK FTD F+ LP+ A+VD +IFC HGGLSP + +++ IR + R  +VP +G +CDLLWS
Sbjct: 142 VWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEGPMCDLLWS 201

Query: 722 DPDKDVQGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLF 901
           DPD D  GWG + RG  +TFG ++   F H + L L+ RAHQ+V +GY +   R +VT+F
Sbjct: 202 DPD-DRGGWGISPRGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGYNWCHDRNVVTIF 260

Query: 902 SAPNYCGEFDNAGAMMSVDETLMCSFQILKPA 997
           SAPNYC    N  A+M +D+TL  SF    PA
Sbjct: 261 SAPNYCYRCGNQAAIMELDDTLKYSFLQFDPA 292


>ref|NP_062648.1| serine/threonine-protein phosphatase 4 catalytic subunit [Mus
           musculus].
          Length = 307

 Score =  293 bits (750), Expect = 2e-79
 Identities = 133/271 (49%), Positives = 194/271 (71%), Gaps = 1/271 (0%)
 Frame = +2

Query: 188 LTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLF 367
           + E+E++ LC K+REI + +  +  +++P+ +CGDIHGQ+YDL  LF  GG  PE+NYLF
Sbjct: 20  IKESEVKALCAKAREILVEESNVQRVDSPVTVCGDIHGQFYDLKELFRVGGDVPETNYLF 79

Query: 368 LGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIKL 544
           +GD+VDRG  S+ET  LLLA K++YP+   L+RGNHE   I ++YGFYDEC R+Y ++ +
Sbjct: 80  MGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVTV 139

Query: 545 WKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSD 724
           W+  T+ F+ L ++AI+D KIFC HGGLSP +Q+++QIR I R  +VP  G +CDLLWSD
Sbjct: 140 WRYCTEIFDYLSLSAIIDGKIFCVHGGLSPSIQTLDQIRTIDRKQEVPHDGPMCDLLWSD 199

Query: 725 PDKDVQGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFS 904
           P+ D  GWG + RG  + FG++VVA+F   +D+D+ICRAHQ+V +GY++     ++T++S
Sbjct: 200 PE-DTTGWGVSPRGAGYLFGSDVVAQFNAANDIDMICRAHQLVMEGYKWHFNETVLTVWS 258

Query: 905 APNYCGEFDNAGAMMSVDETLMCSFQILKPA 997
           APNYC    N  A++ +DE L   F I + A
Sbjct: 259 APNYCYRCGNVAAILELDEHLQKDFIIFEAA 289


>ref|NP_077171.1| serine/threonine-protein phosphatase 6 catalytic subunit [Mus
           musculus].
          Length = 305

 Score =  267 bits (683), Expect = 1e-71
 Identities = 123/255 (48%), Positives = 176/255 (69%), Gaps = 1/255 (0%)
 Frame = +2

Query: 188 LTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLF 367
           L EN+++ LC    ++ L +  +  +  P+ +CGDIHGQ+YDL  LF  GG  P++NY+F
Sbjct: 19  LPENDLKRLCDYVCDLLLEESNVQPVSTPVTVCGDIHGQFYDLCELFRTGGQVPDTNYIF 78

Query: 368 LGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIKL 544
           +GD+VDRG  SLET   LLA K K+P+   LLRGNHE   I ++YGFYDEC+ +Y N   
Sbjct: 79  MGDFVDRGYYSLETFTYLLALKAKWPDRITLLRGNHESRQITQVYGFYDECQTKYGNANA 138

Query: 545 WKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSD 724
           W+  T  F+ L +AA++DE+I C HGGLSPD+++++QIR I R  ++P +G  CDL+WSD
Sbjct: 139 WRYCTKVFDMLTVAALIDEQILCVHGGLSPDIKTLDQIRTIERNQEIPHKGAFCDLVWSD 198

Query: 725 PDKDVQGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFS 904
           P+ DV  W  + RG  + FGA+V  +F+H ++L LICRAHQ+V +GY+F    +LVT++S
Sbjct: 199 PE-DVDTWAISPRGAGWLFGAKVTNEFVHINNLKLICRAHQLVHEGYKFMFDEKLVTVWS 257

Query: 905 APNYCGEFDNAGAMM 949
           APNYC    N  ++M
Sbjct: 258 APNYCYRCGNIASIM 272


>ref|NP_032939.1| serine/threonine-protein phosphatase 2B catalytic subunit alpha
           isoform [Mus musculus].
          Length = 521

 Score =  225 bits (573), Expect = 6e-59
 Identities = 110/278 (39%), Positives = 170/278 (61%), Gaps = 13/278 (4%)
 Frame = +2

Query: 176 KNVQLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPES 355
           K  +L E+    +  +   I   +  LL+++AP+ +CGDIHGQ++DL++LFE GG P  +
Sbjct: 52  KEGRLEESVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANT 111

Query: 356 NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYN 535
            YLFLGDYVDRG  S+E +  L A KI YP+  FLLRGNHEC  +   + F  ECK +Y+
Sbjct: 112 RYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYS 171

Query: 536 IKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLL 715
            +++    D F+CLP+AA+++++  C HGGLSP++ +++ IR++ R  + P  G +CD+L
Sbjct: 172 ERVYDACMDAFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMCDIL 231

Query: 716 WSDP------DKDVQGWGEND-RGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFF 874
           WSDP      +K  + +  N  RG S+ +    V  FL  ++L  I RAH+  + GY  +
Sbjct: 232 WSDPLEDFGNEKTQEHFTHNTVRGCSYFYSYPAVCDFLQHNNLLSILRAHEAQDAGYRMY 291

Query: 875 AKRQ------LVTLFSAPNYCGEFDNAGAMMSVDETLM 970
            K Q      L+T+FSAPNY   ++N  A++  +  +M
Sbjct: 292 RKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNVM 329


>ref|NP_032940.1| serine/threonine-protein phosphatase 2B catalytic subunit beta
           isoform [Mus musculus].
          Length = 525

 Score =  221 bits (564), Expect = 7e-58
 Identities = 105/259 (40%), Positives = 160/259 (61%), Gaps = 13/259 (5%)
 Frame = +2

Query: 233 IFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETI 412
           I   +  ++E+EAP+ +CGDIHGQ++DL++LFE GG P  + YLFLGDYVDRG  S+E +
Sbjct: 80  ILRREKTMIEVEAPITVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRGYFSIECV 139

Query: 413 CLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAI 592
             L   KI YP   FLLRGNHEC  +   + F  ECK +Y+ ++++   + F+ LP+AA+
Sbjct: 140 LYLWVLKILYPSTLFLLRGNHECRHLTEYFTFKQECKIKYSERVYEACMEAFDSLPLAAL 199

Query: 593 VDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGEND---- 760
           ++++  C HGGLSP++ +++ IRR+ R  + P  G +CDLLWSDP +D       +    
Sbjct: 200 LNQQFLCVHGGLSPEIHTLDDIRRLDRFKEPPAFGPMCDLLWSDPSEDFGNEKSQEHFSH 259

Query: 761 ---RGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQ------LVTLFSAPN 913
              RG S+ +    V +FL  ++L  I RAH+  + GY  + K Q      L+T+FSAPN
Sbjct: 260 NTVRGCSYFYNYPAVCEFLQNNNLLSIIRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPN 319

Query: 914 YCGEFDNAGAMMSVDETLM 970
           Y   ++N  A++  +  +M
Sbjct: 320 YLDVYNNKAAVLKYENNVM 338


>ref|NP_032941.1| serine/threonine-protein phosphatase 2B catalytic subunit gamma
           isoform [Mus musculus].
          Length = 513

 Score =  220 bits (560), Expect = 2e-57
 Identities = 104/259 (40%), Positives = 162/259 (62%), Gaps = 13/259 (5%)
 Frame = +2

Query: 233 IFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETI 412
           I   +  ++E+EAP+ +CGD+HGQ++DL++LFE GG P  + YLFLGDYVDRG  S+E +
Sbjct: 67  ILKQEKTMIEVEAPITVCGDVHGQFFDLMKLFEVGGSPSNTRYLFLGDYVDRGYFSIECV 126

Query: 413 CLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAI 592
             L + KI +P+  FLLRGNHEC  +   + F  EC+ +Y+  ++      F+CLP+AA+
Sbjct: 127 LYLWSLKINHPKTLFLLRGNHECRHLTEYFTFKQECRIKYSEMVYDACMHTFDCLPLAAL 186

Query: 593 VDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDP------DKDVQGWGE 754
           ++++  C HGG+SP++  +E IR++ R ++ P  G +CDLLWSDP      +K ++ +  
Sbjct: 187 LNQQFLCVHGGMSPEITCLEDIRKLDRFSEPPAFGPVCDLLWSDPLEDYGSEKTLEHYTH 246

Query: 755 ND-RGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQ------LVTLFSAPN 913
           N  RG S+ F    V +FL  + L  I RAH+  + GY  + K Q      L+T+FSAPN
Sbjct: 247 NTVRGCSYFFSYPAVCEFLQNNSLLSIIRAHEAQDAGYRMYRKNQATGFPSLITIFSAPN 306

Query: 914 YCGEFDNAGAMMSVDETLM 970
           Y   ++N  A++  +  +M
Sbjct: 307 YLDVYNNKAAVLKYENNVM 325


  Database: RefSeq49_MP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 15,617,559
  Number of sequences in database:  30,036
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 43,328,103
Number of extensions: 1318309
Number of successful extensions: 6232
Number of sequences better than 1.0e-05: 13
Number of HSP's gapped: 5998
Number of HSP's successfully gapped: 15
Length of query: 397
Length of database: 15,617,559
Length adjustment: 103
Effective length of query: 294
Effective length of database: 12,523,851
Effective search space: 3682012194
Effective search space used: 3682012194
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

Search to RefSeqSP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-002996
         (1193 letters)

Database: RefSeq49_SP.fasta 
           24,897 sequences; 11,343,932 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001038024.1| protein phosphatase 1 catalytic subunit alph...   677   0.0  
Alignment   gi|NP_001038025.1| protein phosphatase 1 catalytic subunit gamm...   615   e-176
Alignment   gi|NP_999349.1| serine/threonine-protein phosphatase PP1-beta c...   600   e-172
Alignment   gi|NP_999531.1| serine/threonine-protein phosphatase 2A catalyt...   294   6e-80
Alignment   gi|XP_003133430.1| PREDICTED: serine/threonine-protein phosphat...   284   6e-77
Alignment   gi|XP_001929230.1| PREDICTED: serine/threonine-protein phosphat...   267   8e-72
Alignment   gi|XP_003122208.1| PREDICTED: serine/threonine-protein phosphat...   261   7e-70
Alignment   gi|XP_003122209.1| PREDICTED: serine/threonine-protein phosphat...   229   3e-60
Alignment   gi|NP_999293.1| serine/threonine-protein phosphatase 2B catalyt...   226   1e-59
Alignment   gi|XP_001928060.1| PREDICTED: serine/threonine-protein phosphat...   221   5e-58

>ref|NP_001038024.1| protein phosphatase 1 catalytic subunit alpha isoform [Sus scrofa].
          Length = 330

 Score =  677 bits (1748), Expect = 0.0
 Identities = 324/325 (99%), Positives = 324/325 (99%)
 Frame = +2

Query: 101  MSDSEKLNLDSIIGRLLEVQGSRPGKNVQLTENEIRGLCLKSREIFLSQPILLELEAPLK 280
            MSDSEKLNLDSIIGRLLEVQGSRPGKNVQLTENEIRGLCLKSREIFLSQPILLELEAPLK
Sbjct: 1    MSDSEKLNLDSIIGRLLEVQGSRPGKNVQLTENEIRGLCLKSREIFLSQPILLELEAPLK 60

Query: 281  ICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 460
            ICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL
Sbjct: 61   ICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 120

Query: 461  LRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDL 640
            LRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDL
Sbjct: 121  LRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDL 180

Query: 641  QSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKFLHKHD 820
            QSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKFLHKHD
Sbjct: 181  QSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKFLHKHD 240

Query: 821  LDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAD 1000
            LDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAD
Sbjct: 241  LDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAD 300

Query: 1001 XNKGKYGQFSGLNPGGRPITPPRNS 1075
             NKGKYGQFSGLNPGGRPITPPRNS
Sbjct: 301  KNKGKYGQFSGLNPGGRPITPPRNS 325


>ref|NP_001038025.1| protein phosphatase 1 catalytic subunit gamma isoform [Sus scrofa].
          Length = 323

 Score =  615 bits (1587), Expect = e-176
 Identities = 297/323 (91%), Positives = 304/323 (94%)
 Frame = +2

Query: 101  MSDSEKLNLDSIIGRLLEVQGSRPGKNVQLTENEIRGLCLKSREIFLSQPILLELEAPLK 280
            M+D +KLN+DSII RLLEV+GS+PGKNVQL ENEIRGLCLKSREIFLSQPILLELEAPLK
Sbjct: 1    MADIDKLNIDSIIQRLLEVRGSKPGKNVQLQENEIRGLCLKSREIFLSQPILLELEAPLK 60

Query: 281  ICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 460
            ICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL
Sbjct: 61   ICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 120

Query: 461  LRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDL 640
            LRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDL
Sbjct: 121  LRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDL 180

Query: 641  QSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKFLHKHD 820
            QSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDV GWGENDRGVSFTFGAEVVAKFLHKHD
Sbjct: 181  QSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVLGWGENDRGVSFTFGAEVVAKFLHKHD 240

Query: 821  LDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAD 1000
            LDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPA+
Sbjct: 241  LDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAE 300

Query: 1001 XNKGKYGQFSGLNPGGRPITPPR 1069
              K             RP+TPPR
Sbjct: 301  KKKPN---------ATRPVTPPR 314


>ref|NP_999349.1| serine/threonine-protein phosphatase PP1-beta catalytic subunit [Sus
            scrofa].
          Length = 327

 Score =  600 bits (1548), Expect = e-172
 Identities = 290/325 (89%), Positives = 308/325 (94%)
 Frame = +2

Query: 101  MSDSEKLNLDSIIGRLLEVQGSRPGKNVQLTENEIRGLCLKSREIFLSQPILLELEAPLK 280
            M+D E LN+DS+I RLLEV+G RPGK VQ+TE E+RGLC+KSREIFLSQPILLELEAPLK
Sbjct: 1    MADGE-LNVDSLITRLLEVRGCRPGKIVQMTEAEVRGLCIKSREIFLSQPILLELEAPLK 59

Query: 281  ICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 460
            ICGDIHGQY DLLRLFEYGGFPPE+NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL
Sbjct: 60   ICGDIHGQYTDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 119

Query: 461  LRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDL 640
            LRGNHECASINRIYGFYDECKRR+NIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDL
Sbjct: 120  LRGNHECASINRIYGFYDECKRRFNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDL 179

Query: 641  QSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKFLHKHD 820
            QSMEQIRRIMRPTDVPD GLLCDLLWSDPDKDVQGWGENDRGVSFTFGA+VV+KFL++HD
Sbjct: 180  QSMEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWGENDRGVSFTFGADVVSKFLNRHD 239

Query: 821  LDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAD 1000
            LDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAG MMSVDETLMCSFQILKP++
Sbjct: 240  LDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGGMMSVDETLMCSFQILKPSE 299

Query: 1001 XNKGKYGQFSGLNPGGRPITPPRNS 1075
              K KY Q+ GLN  GRP+TPPR +
Sbjct: 300  -KKAKY-QYGGLN-SGRPVTPPRTA 321


>ref|NP_999531.1| serine/threonine-protein phosphatase 2A catalytic subunit alpha
           isoform [Sus scrofa].
          Length = 309

 Score =  294 bits (753), Expect = 6e-80
 Identities = 135/272 (49%), Positives = 190/272 (69%), Gaps = 1/272 (0%)
 Frame = +2

Query: 185 QLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYL 364
           QL+E++++ LC K++EI   +  + E+  P+ +CGD+HGQ++DL+ LF  GG  P++NYL
Sbjct: 22  QLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYL 81

Query: 365 FLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIK 541
           F+GDYVDRG  S+ET+ LL+A K++Y E   +LRGNHE   I ++YGFYDEC R+Y N  
Sbjct: 82  FMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNAN 141

Query: 542 LWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWS 721
           +WK FTD F+ LP+ A+VD +IFC HGGLSP + +++ IR + R  +VP +G +CDLLWS
Sbjct: 142 VWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEGPMCDLLWS 201

Query: 722 DPDKDVQGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLF 901
           DPD D  GWG + RG  +TFG ++   F H + L L+ RAHQ+V +GY +   R +VT+F
Sbjct: 202 DPD-DRGGWGISPRGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGYNWCHDRNVVTIF 260

Query: 902 SAPNYCGEFDNAGAMMSVDETLMCSFQILKPA 997
           SAPNYC    N  A+M +D+TL  SF    PA
Sbjct: 261 SAPNYCYRCGNQAAIMELDDTLKYSFLQFDPA 292


>ref|XP_003133430.1| PREDICTED: serine/threonine-protein phosphatase 2A catalytic
           subunit alpha isoform [Sus scrofa].
          Length = 287

 Score =  284 bits (727), Expect = 6e-77
 Identities = 131/261 (50%), Positives = 181/261 (69%), Gaps = 1/261 (0%)
 Frame = +2

Query: 218 LKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQ 397
           L ++EI   +  + E+  P+ +CGD+HGQ++DL+ LF  GG  P++NYLF+GDYVDRG  
Sbjct: 11  LHAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYY 70

Query: 398 SLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIKLWKTFTDCFNC 574
           S+ET+ LL+A K++YPE   +LRGNHE   I ++YGFYDEC R+Y N  +WK FTD F+ 
Sbjct: 71  SVETVTLLVALKVRYPERITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDY 130

Query: 575 LPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGE 754
           LP+ A+VD +IFC HGGLSP + +++ IR + R  +VP +G +CDLLWSDPD D  GWG 
Sbjct: 131 LPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEGPMCDLLWSDPD-DRGGWGI 189

Query: 755 NDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDN 934
           + RG  +TFG ++   F H + L L+ RAHQ+V +GY +   R +VT+FSAPNYC    N
Sbjct: 190 SPRGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGYNWCHDRNVVTIFSAPNYCYRCGN 249

Query: 935 AGAMMSVDETLMCSFQILKPA 997
             A+M +D+TL  SF    PA
Sbjct: 250 QAAIMELDDTLKYSFLQFDPA 270


>ref|XP_001929230.1| PREDICTED: serine/threonine-protein phosphatase 6 catalytic subunit
           isoform 1 [Sus scrofa].
          Length = 305

 Score =  267 bits (683), Expect = 8e-72
 Identities = 123/255 (48%), Positives = 176/255 (69%), Gaps = 1/255 (0%)
 Frame = +2

Query: 188 LTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLF 367
           L EN+++ LC    ++ L +  +  +  P+ +CGDIHGQ+YDL  LF  GG  P++NY+F
Sbjct: 19  LPENDLKRLCDYVCDLLLEESNVQPVSTPVTVCGDIHGQFYDLCELFRTGGQVPDTNYIF 78

Query: 368 LGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIKL 544
           +GD+VDRG  SLET   LLA K K+P+   LLRGNHE   I ++YGFYDEC+ +Y N   
Sbjct: 79  MGDFVDRGYYSLETFTYLLALKAKWPDRITLLRGNHESRQITQVYGFYDECQTKYGNANA 138

Query: 545 WKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSD 724
           W+  T  F+ L +AA++DE+I C HGGLSPD+++++QIR I R  ++P +G  CDL+WSD
Sbjct: 139 WRYCTKVFDMLTVAALIDEQILCVHGGLSPDIKTLDQIRTIERNQEIPHKGAFCDLVWSD 198

Query: 725 PDKDVQGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFS 904
           P+ DV  W  + RG  + FGA+V  +F+H ++L LICRAHQ+V +GY+F    +LVT++S
Sbjct: 199 PE-DVDTWAISPRGAGWLFGAKVTNEFVHINNLKLICRAHQLVHEGYKFMFDEKLVTVWS 257

Query: 905 APNYCGEFDNAGAMM 949
           APNYC    N  ++M
Sbjct: 258 APNYCYRCGNIASIM 272


>ref|XP_003122208.1| PREDICTED: serine/threonine-protein phosphatase 6 catalytic subunit
           isoform 2 [Sus scrofa].
          Length = 350

 Score =  261 bits (666), Expect = 7e-70
 Identities = 120/250 (48%), Positives = 172/250 (68%), Gaps = 1/250 (0%)
 Frame = +2

Query: 203 IRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYV 382
           ++ LC    ++ L +  +  +  P+ +CGDIHGQ+YDL  LF  GG  P++NY+F+GD+V
Sbjct: 69  LQRLCDYVCDLLLEESNVQPVSTPVTVCGDIHGQFYDLCELFRTGGQVPDTNYIFMGDFV 128

Query: 383 DRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIKLWKTFT 559
           DRG  SLET   LLA K K+P+   LLRGNHE   I ++YGFYDEC+ +Y N   W+  T
Sbjct: 129 DRGYYSLETFTYLLALKAKWPDRITLLRGNHESRQITQVYGFYDECQTKYGNANAWRYCT 188

Query: 560 DCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDV 739
             F+ L +AA++DE+I C HGGLSPD+++++QIR I R  ++P +G  CDL+WSDP+ DV
Sbjct: 189 KVFDMLTVAALIDEQILCVHGGLSPDIKTLDQIRTIERNQEIPHKGAFCDLVWSDPE-DV 247

Query: 740 QGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYC 919
             W  + RG  + FGA+V  +F+H ++L LICRAHQ+V +GY+F    +LVT++SAPNYC
Sbjct: 248 DTWAISPRGAGWLFGAKVTNEFVHINNLKLICRAHQLVHEGYKFMFDEKLVTVWSAPNYC 307

Query: 920 GEFDNAGAMM 949
               N  ++M
Sbjct: 308 YRCGNIASIM 317


>ref|XP_003122209.1| PREDICTED: serine/threonine-protein phosphatase 6 catalytic subunit
           isoform 3 [Sus scrofa].
          Length = 283

 Score =  229 bits (583), Expect = 3e-60
 Identities = 112/255 (43%), Positives = 160/255 (62%), Gaps = 1/255 (0%)
 Frame = +2

Query: 188 LTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLF 367
           L EN+++ LC    ++ L +  +  +  P+ +CGDIHGQ                     
Sbjct: 19  LPENDLKRLCDYVCDLLLEESNVQPVSTPVTVCGDIHGQ--------------------- 57

Query: 368 LGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIKL 544
            GD+VDRG  SLET   LLA K K+P+   LLRGNHE   I ++YGFYDEC+ +Y N   
Sbjct: 58  -GDFVDRGYYSLETFTYLLALKAKWPDRITLLRGNHESRQITQVYGFYDECQTKYGNANA 116

Query: 545 WKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSD 724
           W+  T  F+ L +AA++DE+I C HGGLSPD+++++QIR I R  ++P +G  CDL+WSD
Sbjct: 117 WRYCTKVFDMLTVAALIDEQILCVHGGLSPDIKTLDQIRTIERNQEIPHKGAFCDLVWSD 176

Query: 725 PDKDVQGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFS 904
           P+ DV  W  + RG  + FGA+V  +F+H ++L LICRAHQ+V +GY+F    +LVT++S
Sbjct: 177 PE-DVDTWAISPRGAGWLFGAKVTNEFVHINNLKLICRAHQLVHEGYKFMFDEKLVTVWS 235

Query: 905 APNYCGEFDNAGAMM 949
           APNYC    N  ++M
Sbjct: 236 APNYCYRCGNIASIM 250


>ref|NP_999293.1| serine/threonine-protein phosphatase 2B catalytic subunit alpha
           isoform [Sus scrofa].
          Length = 511

 Score =  226 bits (577), Expect = 1e-59
 Identities = 111/278 (39%), Positives = 170/278 (61%), Gaps = 13/278 (4%)
 Frame = +2

Query: 176 KNVQLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPES 355
           K  +L EN    +  +   I   +  LL+++AP+ +CGDIHGQ++DL++LFE GG P  +
Sbjct: 52  KEGRLEENVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANT 111

Query: 356 NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYN 535
            YLFLGDYVDRG  S+E +  L A KI YP+  FLLRGNHEC  +   + F  ECK +Y+
Sbjct: 112 RYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYS 171

Query: 536 IKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLL 715
             ++    D F+CLP+AA+++++  C HGGLSP++ +++ IR++ R  + P  G +CD+L
Sbjct: 172 EHVYDACMDAFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMCDIL 231

Query: 716 WSDP------DKDVQGWGEND-RGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFF 874
           WSDP      +K  + +  N  RG S+ +    V +FL  ++L  I RAH+  + GY  +
Sbjct: 232 WSDPLEDFGNEKTQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQDAGYRMY 291

Query: 875 AKRQ------LVTLFSAPNYCGEFDNAGAMMSVDETLM 970
            K Q      L+T+FSAPNY   ++N  A++  +  +M
Sbjct: 292 RKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNVM 329


>ref|XP_001928060.1| PREDICTED: serine/threonine-protein phosphatase 2B catalytic
           subunit beta isoform isoform 2 [Sus scrofa].
          Length = 515

 Score =  221 bits (564), Expect = 5e-58
 Identities = 105/259 (40%), Positives = 160/259 (61%), Gaps = 13/259 (5%)
 Frame = +2

Query: 233 IFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETI 412
           I   +  ++E+EAP+ +CGDIHGQ++DL++LFE GG P  + YLFLGDYVDRG  S+E +
Sbjct: 80  ILRREKTMIEVEAPITVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRGYFSIECV 139

Query: 413 CLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAI 592
             L   KI YP   FLLRGNHEC  +   + F  ECK +Y+ ++++   + F+ LP+AA+
Sbjct: 140 LYLWVLKILYPSTLFLLRGNHECRHLTEYFTFKQECKIKYSERVYEACMEAFDSLPLAAL 199

Query: 593 VDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGEND---- 760
           ++++  C HGGLSP++ +++ IRR+ R  + P  G +CDLLWSDP +D       +    
Sbjct: 200 LNQQFLCVHGGLSPEIHTLDDIRRLDRFKEPPAFGPMCDLLWSDPSEDFGNEKSQEHFSH 259

Query: 761 ---RGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQ------LVTLFSAPN 913
              RG S+ +    V +FL  ++L  I RAH+  + GY  + K Q      L+T+FSAPN
Sbjct: 260 NTVRGCSYFYNYPAVCEFLQNNNLLSIIRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPN 319

Query: 914 YCGEFDNAGAMMSVDETLM 970
           Y   ++N  A++  +  +M
Sbjct: 320 YLDVYNNKAAVLKYENNVM 338


  Database: RefSeq49_SP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 11,343,932
  Number of sequences in database:  24,897
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 32,592,642
Number of extensions: 1030287
Number of successful extensions: 4955
Number of sequences better than 1.0e-05: 16
Number of HSP's gapped: 4869
Number of HSP's successfully gapped: 18
Length of query: 397
Length of database: 11,343,932
Length adjustment: 101
Effective length of query: 296
Effective length of database: 8,829,335
Effective search space: 2613483160
Effective search space used: 2613483160
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)

Search to Sscrofa10_2

BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-002996
         (1193 letters)

Database: Sscrofa_10.2.fasta 
           4582 sequences; 2,808,509,378 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Sscrofa_Chr02                                                         462   e-127
Sscrofa_Chr03                                                          92   8e-16
Sscrofa_Chr14                                                          62   7e-07

>Sscrofa_Chr02 
||          Length = 162569375

 Score =  462 bits (233), Expect = e-127
 Identities = 233/233 (100%)
 Strand = Plus / Plus

                                                                           
Query: 287     ggtgacatccacggccagtactatgaccttctgcggctgttcgagtacggcggcttccct 346
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3839578 ggtgacatccacggccagtactatgaccttctgcggctgttcgagtacggcggcttccct 3839637

                                                                           
Query: 347     ccagagagcaactacctgttcctgggggactacgtggaccggggcaagcagtctttggag 406
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3839638 ccagagagcaactacctgttcctgggggactacgtggaccggggcaagcagtctttggag 3839697

                                                                           
Query: 407     accatctgcctgctgctggcctataagatcaagtacccggagaacttcttcctgctccgt 466
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3839698 accatctgcctgctgctggcctataagatcaagtacccggagaacttcttcctgctccgt 3839757

                                                                    
Query: 467     gggaaccacgagtgtgccagcatcaaccgcatctatggcttctacgatgagtg 519
               |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3839758 gggaaccacgagtgtgccagcatcaaccgcatctatggcttctacgatgagtg 3839810



 Score =  456 bits (230), Expect = e-125
 Identities = 230/230 (100%)
 Strand = Plus / Plus

                                                                           
Query: 622     aggcctgtcccccgacctgcagtccatggagcagattcggcgtatcatgcggcccacaga 681
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3840902 aggcctgtcccccgacctgcagtccatggagcagattcggcgtatcatgcggcccacaga 3840961

                                                                           
Query: 682     cgtgcctgaccagggcttactgtgtgacctgctgtggtctgaccccgacaaggacgtgca 741
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3840962 cgtgcctgaccagggcttactgtgtgacctgctgtggtctgaccccgacaaggacgtgca 3841021

                                                                           
Query: 742     gggctggggcgagaatgaccgcggcgtctcctttacctttggagcggaggtggtggccaa 801
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3841022 gggctggggcgagaatgaccgcggcgtctcctttacctttggagcggaggtggtggccaa 3841081

                                                                 
Query: 802     gttcctgcacaagcacgacttggatctcatctgccgggcacaccaggtgg 851
               ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3841082 gttcctgcacaagcacgacttggatctcatctgccgggcacaccaggtgg 3841131



 Score =  359 bits (181), Expect = 2e-96
 Identities = 203/213 (95%)
 Strand = Plus / Plus

                                                                           
Query: 981     agatcctcaagcccgccgacnagaacaaggggaaatatgggcagttcagtggcctgaatc 1040
               |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 3841426 agatcctcaagcccgccgacaagaacaaggggaaatatgggcagttcagtggcctgaatc 3841485

                                                                           
Query: 1041    ctggaggccggcccatcaccccaccccgcaactccgccaaagccaagaaatagcctccat 1100
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3841486 ctggaggccggcccatcaccccaccccgcaactccgccaaagccaagaaatagcctccat 3841545

                                                                           
Query: 1101    gtgcccgccctctatcccagatggtggattgtacagaaatcacatggccacannnnnnnt 1160
               ||||||||||||||||||||||||||||||||||||||||||||||||||||       |
Sbjct: 3841546 gtgcccgccctctatcccagatggtggattgtacagaaatcacatggccacagggggggt 3841605

                                                
Query: 1161    cacactggccccccagcccacttgtcatgggga 1193
               |||||||||||||  ||||||||||||||||||
Sbjct: 3841606 cacactggcccccaggcccacttgtcatgggga 3841638



 Score =  276 bits (139), Expect = 3e-71
 Identities = 139/139 (100%)
 Strand = Plus / Plus

                                                                           
Query: 844     ccaggtggtagaagatggctacgagttctttgccaagaggcagctggtgacactcttctc 903
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3841206 ccaggtggtagaagatggctacgagttctttgccaagaggcagctggtgacactcttctc 3841265

                                                                           
Query: 904     agctcctaactactgcggcgagtttgacaacgcaggcgccatgatgagcgtggacgagac 963
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3841266 agctcctaactactgcggcgagtttgacaacgcaggcgccatgatgagcgtggacgagac 3841325

                                  
Query: 964     gctcatgtgctccttccag 982
               |||||||||||||||||||
Sbjct: 3841326 gctcatgtgctccttccag 3841344



 Score =  274 bits (138), Expect = 1e-70
 Identities = 138/138 (100%)
 Strand = Plus / Plus

                                                                           
Query: 18      gagagccaggccggaaggaggcagcgggagggtgggaggcaggagcgggcccggagctgc 77
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3838682 gagagccaggccggaaggaggcagcgggagggtgggaggcaggagcgggcccggagctgc 3838741

                                                                           
Query: 78      tgggccagagcggcggcgccgccatgtccgacagcgagaagctcaacctggactctatca 137
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3838742 tgggccagagcggcggcgccgccatgtccgacagcgagaagctcaacctggactctatca 3838801

                                 
Query: 138     tcgggcgcctgctggaag 155
               ||||||||||||||||||
Sbjct: 3838802 tcgggcgcctgctggaag 3838819



 Score =  274 bits (138), Expect = 1e-70
 Identities = 138/138 (100%)
 Strand = Plus / Plus

                                                                           
Query: 154     agtgcagggctcgcggcctggaaagaatgtacagctgacagagaacgagatccgtggtct 213
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3839314 agtgcagggctcgcggcctggaaagaatgtacagctgacagagaacgagatccgtggtct 3839373

                                                                           
Query: 214     gtgcctcaaatcccgggagattttcctgagccagcccatccttctggagctggaggcacc 273
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3839374 gtgcctcaaatcccgggagattttcctgagccagcccatccttctggagctggaggcacc 3839433

                                 
Query: 274     cctcaagatctgcggtga 291
               ||||||||||||||||||
Sbjct: 3839434 cctcaagatctgcggtga 3839451



 Score =  210 bits (106), Expect = 1e-51
 Identities = 106/106 (100%)
 Strand = Plus / Plus

                                                                           
Query: 519     gcaagagacgctacaacatcaagctgtggaaaaccttcactgactgcttcaactgcctgc 578
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3840408 gcaagagacgctacaacatcaagctgtggaaaaccttcactgactgcttcaactgcctgc 3840467

                                                             
Query: 579     ctatcgctgccattgtggacgagaagatcttttgctgccacggagg 624
               ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3840468 ctatcgctgccattgtggacgagaagatcttttgctgccacggagg 3840513


>Sscrofa_Chr03 
||          Length = 144787322

 Score = 91.7 bits (46), Expect = 8e-16
 Identities = 73/82 (89%)
 Strand = Plus / Plus

                                                                             
Query: 543       tgtggaaaaccttcactgactgcttcaactgcctgcctatcgctgccattgtggacgaga 602
                 ||||||| ||||||||||| || ||||||||| ||||||| |||||||||||||| ||||
Sbjct: 117259330 tgtggaagaccttcactgattgtttcaactgcttgcctatagctgccattgtggatgaga 117259389

                                       
Query: 603       agatcttttgctgccacggagg 624
                 ||||||| || || ||||||||
Sbjct: 117259390 agatcttctgttgtcacggagg 117259411



 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 103/125 (82%)
 Strand = Plus / Plus

                                                                             
Query: 392       aagcagtctttggagaccatctgcctgctgctggcctataagatcaagtacccggagaac 451
                 |||||||||||||| ||||| ||  |||||||||| ||||| ||||| || || ||||||
Sbjct: 117257995 aagcagtctttggaaaccatttgtttgctgctggcttataaaatcaaatatccagagaac 117258054

                                                                             
Query: 452       ttcttcctgctccgtgggaaccacgagtgtgccagcatcaaccgcatctatggcttctac 511
                 ||||| ||  |  | || ||||| |||||||| |||||||| ||||| ||||| ||||| 
Sbjct: 117258055 ttctttctcttaagaggaaaccatgagtgtgctagcatcaatcgcatttatggattctat 117258114

                      
Query: 512       gatga 516
                 |||||
Sbjct: 117258115 gatga 117258119


>Sscrofa_Chr14 
||          Length = 153851969

 Score = 61.9 bits (31), Expect = 7e-07
 Identities = 94/115 (81%)
 Strand = Plus / Minus

                                                                            
Query: 846      aggtggtagaagatggctacgagttctttgccaagaggcagctggtgacactcttctcag 905
                ||||||| |||||||| || || || ||||| ||||||||| |||| || || || || |
Sbjct: 33995840 aggtggttgaagatggatatgaattttttgcaaagaggcagttggtcactctgttttctg 33995781

                                                                       
Query: 906      ctcctaactactgcggcgagtttgacaacgcaggcgccatgatgagcgtggacga 960
                | || || || || || ||||||||||| ||||| ||||||||||| ||||||||
Sbjct: 33995780 cgcccaattattgtggagagtttgacaatgcaggtgccatgatgagtgtggacga 33995726


  Database: Sscrofa_10.2.fasta
    Posted date:  Nov 16, 2011 10:34 AM
  Number of letters in database: 2,808,509,378
  Number of sequences in database:  4582
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 28,903,114
Number of extensions: 168
Number of successful extensions: 168
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 167
Number of HSP's successfully gapped: 10
Length of query: 1193
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1172
Effective length of database: 2,808,413,156
Effective search space: 3291460218832
Effective search space used: 3291460218832
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)