Animal-Genome cDNA 20110601C-003048


Search to RefSeqBP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-003048
         (1406 letters)

Database: RefSeq49_BP.fasta 
           33,088 sequences; 17,681,374 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_777094.1| glia-derived nexin [Bos taurus].                     712   0.0  
Alignment   gi|NP_776562.1| plasminogen activator inhibitor 1 precursor [Bo...   283   3e-76
Alignment   gi|NP_001179167.1| neuroserpin [Bos taurus].                         229   4e-60
Alignment   gi|XP_002684991.1| PREDICTED: serpin peptidase inhibitor, clade...   229   4e-60
Alignment   gi|NP_001095524.1| serpin I2 [Bos taurus].                           201   1e-51
Alignment   gi|NP_001093829.1| serpin E3 precursor [Bos taurus].                 194   2e-49
Alignment   gi|NP_001193539.1| leukocyte elastase inhibitor [Bos taurus].        178   9e-45
Alignment   gi|NP_001193642.1| serpin peptidase inhibitor, clade B like [Bo...   174   1e-43
Alignment   gi|XP_001254469.1| PREDICTED: serpin peptidase inhibitor, clade...   172   5e-43
Alignment   gi|XP_001254729.1| PREDICTED: serpin peptidase inhibitor, clade...   171   2e-42

>ref|NP_777094.1| glia-derived nexin [Bos taurus].
          Length = 397

 Score =  712 bits (1837), Expect = 0.0
 Identities = 358/392 (91%), Positives = 369/392 (94%)
 Frame = +2

Query: 230  MNWHFPFFLVATVTLPSVCSQFNPLSLEELGSDTGIQVFNQIVKSRPHDNIVISPHGIAS 409
            MNWHFPFFLVA+VTLPSVCSQFNPLSLEELGSDTGIQVFNQIVKS+PHDNI+ISPHGIAS
Sbjct: 1    MNWHFPFFLVASVTLPSVCSQFNPLSLEELGSDTGIQVFNQIVKSQPHDNIIISPHGIAS 60

Query: 410  VLGMLQLGADGRTKKQLTTVMRYGVNGVGKVLKKINKAIVSKKNKDIVTVANAVFVKNGF 589
            VLGMLQLGADGRTKKQLTTVMRYGVNGVGK+LKKINKAIVSKKNKDIV VANAVFVKN  
Sbjct: 61   VLGMLQLGADGRTKKQLTTVMRYGVNGVGKMLKKINKAIVSKKNKDIVMVANAVFVKNDS 120

Query: 590  KMEVPFVTRNKDVFQCEVRNADFEDPASACDSINLWVRNETRGMIXXXXXXXXXXXXXTR 769
            KMEVPFVTRNKDVFQCEVRNA+FEDPASAC SIN WVRNET+GMI             TR
Sbjct: 121  KMEVPFVTRNKDVFQCEVRNANFEDPASACASINAWVRNETQGMIDSLLSPDLLNGVLTR 180

Query: 770  LVLVNAVYFKGLWKSRFQPENTKKRTFVAADGKSYQVPMLAQLSVFRCGSTSTPSDLWYN 949
            LVLVNAVYFKGLW+SRF PENTKKRTFVAADGKSYQVPMLAQLSVFRCGSTSTPS LWYN
Sbjct: 181  LVLVNAVYFKGLWRSRFLPENTKKRTFVAADGKSYQVPMLAQLSVFRCGSTSTPSGLWYN 240

Query: 950  FIELPYHGESISMLIALPTESSTPLSAIIPHISTKTIDSWMSTMVPKRVQVILPKFTAVA 1129
            FIELPYHGESISMLIALPTESS PLSAI+PHISTKTIDSW+STMVPKRVQVILPKFTAVA
Sbjct: 241  FIELPYHGESISMLIALPTESSVPLSAIVPHISTKTIDSWVSTMVPKRVQVILPKFTAVA 300

Query: 1130 QTDLKEPLKVLGVTEMFDPSKANFAKITRSENLPVSHILQKAKIEVSEDGTKASAATTAI 1309
            QTDLKEPLKVLG+T+MFDPSKANFAKITRSENL VSHILQKAKIEVSEDGTKASAATTAI
Sbjct: 301  QTDLKEPLKVLGITDMFDPSKANFAKITRSENLHVSHILQKAKIEVSEDGTKASAATTAI 360

Query: 1310 LIARSSPPWFIVDRPFLFFIRHNPTSAVLFMG 1405
            LIARSSPPWFIVDRPFLFFIRHNPT AVLFMG
Sbjct: 361  LIARSSPPWFIVDRPFLFFIRHNPTGAVLFMG 392


>ref|NP_776562.1| plasminogen activator inhibitor 1 precursor [Bos taurus].
          Length = 402

 Score =  283 bits (724), Expect = 3e-76
 Identities = 149/365 (40%), Positives = 218/365 (59%), Gaps = 2/365 (0%)
 Frame = +2

Query: 317  LGSDTGIQVFNQIVKSRPHDNIVISPHGIASVLGMLQLGADGRTKKQLTTVMRYGVN--G 490
            L +D G++VF Q+V++    N+V SP+G+ASVL MLQL   G T++Q+   M++ +   G
Sbjct: 34   LATDFGVKVFQQVVRASKDRNVVFSPYGVASVLAMLQLTTGGETRQQIQEAMQFKIEEKG 93

Query: 491  VGKVLKKINKAIVSKKNKDIVTVANAVFVKNGFKMEVPFVTRNKDVFQCEVRNADFEDPA 670
            +     ++ K ++   NKD ++ A+A+FV+   ++   F+     +F+  V+  DF +  
Sbjct: 94   MAPAFHRLYKELMGPWNKDEISTADAIFVQRDLELVHGFMPNFFRLFRTTVKQVDFSEVE 153

Query: 671  SACDSINLWVRNETRGMIXXXXXXXXXXXXXTRLVLVNAVYFKGLWKSRFQPENTKKRTF 850
             A   +N WV+  T+GMI             TRLVLVNA+YF G WK  F   NT  R F
Sbjct: 154  RARFIVNDWVKRHTKGMISDLLGEGAVDQL-TRLVLVNALYFNGQWKMPFPESNTHHRLF 212

Query: 851  VAADGKSYQVPMLAQLSVFRCGSTSTPSDLWYNFIELPYHGESISMLIALPTESSTPLSA 1030
              +DG +  VPM+AQ + F     +TP   +Y+ +ELPYHG ++SMLIA P E   PLSA
Sbjct: 213  HKSDGSTISVPMMAQTNKFNYTEFTTPDGRYYDILELPYHGNTLSMLIAAPYEKEVPLSA 272

Query: 1031 IIPHISTKTIDSWMSTMVPKRVQVILPKFTAVAQTDLKEPLKVLGVTEMFDPSKANFAKI 1210
            +   +  + I  W   M      ++LPKF+   + DL+ PL+ LG+T+MF PS+A+F+  
Sbjct: 273  LTSILDAELISQWKGNMTRLTRLLVLPKFSLETEIDLRRPLENLGMTDMFRPSQADFSSF 332

Query: 1211 TRSENLPVSHILQKAKIEVSEDGTKASAATTAILIARSSPPWFIVDRPFLFFIRHNPTSA 1390
            +  E L VS  LQK KIEV+E GT AS++T  ++ AR +P   I+DRPFLF +RHNPT  
Sbjct: 333  SDQEFLYVSQALQKVKIEVNESGTLASSSTALVVSARMAPEEIIMDRPFLFVVRHNPTGT 392

Query: 1391 VLFMG 1405
            VLFMG
Sbjct: 393  VLFMG 397


>ref|NP_001179167.1| neuroserpin [Bos taurus].
          Length = 410

 Score =  229 bits (584), Expect = 4e-60
 Identities = 129/373 (34%), Positives = 213/373 (57%), Gaps = 8/373 (2%)
 Frame = +2

Query: 311  EELGSDTGIQVFNQIVKSRPHDNIVISPHGIASVLGMLQLGADGRTKKQLTTVMRYGVNG 490
            +E  ++  + ++N +  +   +NI+ SP  +   +GML+LGA G T K++   M Y    
Sbjct: 23   DETIAELSVNMYNHLRATGEDENILFSPLSVTLAMGMLELGAQGSTLKEIRHSMGYDSLK 82

Query: 491  VGK---VLKKINKAIVSKKNKDIVTVANAVFVKNGFKMEVPFVTRNKDVFQCEVRNADFE 661
             G+    LK ++  + +++++ ++ +AN++FV+NGF +   F+   K  F  EV + DF 
Sbjct: 83   NGEEFSFLKDLSHMVTAEESQYVMKIANSLFVQNGFHISEEFLQMIKKYFNAEVNHVDFS 142

Query: 662  DPASACDSINLWVRNETRGMIXXXXXXXXXXXXXTRLVLVNAVYFKGLWKSRFQPENTKK 841
               +  + IN WV N T  ++             T L L+NAVYFKG WKS+F+PENT+ 
Sbjct: 143  QNVAVANYINKWVENNTNSLLKDLVSPRDFDAV-THLALINAVYFKGSWKSQFRPENTRT 201

Query: 842  RTFVAADGKSYQVPMLAQLSVFRCGSTSTPSDL---WYNFIELPYHGESISMLIALPTES 1012
             +F   D    Q+PM+ Q   F  G  S  S+     Y  +E+PY G++ISM++ L +  
Sbjct: 202  FSFTKDDESEVQIPMMYQQGEFYYGEFSDGSNEAGGIYQVLEIPYEGDAISMMLVL-SRQ 260

Query: 1013 STPLSAIIPHISTKTIDSWMSTMVPKRVQVILPKFTAVAQTDLKEPLKVLGVTEMFDPSK 1192
              PL+ + P + T+ I+ W +++  ++V+V LP+FT   + DLK+ LK LGVTE+F    
Sbjct: 261  EVPLATLEPLVKTQLIEEWANSVKKQKVEVYLPRFTVEQEIDLKDVLKALGVTEVF-IKN 319

Query: 1193 ANFAKITRSENLPVSHILQKAKIEVSEDGTKASAATTAILIARSSP--PWFIVDRPFLFF 1366
            AN   ++ ++ + +S  + K  IEV+E+G++A+AA+  I I+R +   P  IVD PF F 
Sbjct: 320  ANLTALSDNKEIFLSKAIHKCFIEVNEEGSEAAAASGMIAISRMAVLYPQVIVDHPFFFL 379

Query: 1367 IRHNPTSAVLFMG 1405
            IR+  T  +LFMG
Sbjct: 380  IRNRRTGTILFMG 392


>ref|XP_002684991.1| PREDICTED: serpin peptidase inhibitor, clade I (neuroserpin), member
            1 [Bos taurus].
          Length = 410

 Score =  229 bits (584), Expect = 4e-60
 Identities = 129/373 (34%), Positives = 213/373 (57%), Gaps = 8/373 (2%)
 Frame = +2

Query: 311  EELGSDTGIQVFNQIVKSRPHDNIVISPHGIASVLGMLQLGADGRTKKQLTTVMRYGVNG 490
            +E  ++  + ++N +  +   +NI+ SP  +   +GML+LGA G T K++   M Y    
Sbjct: 23   DETIAELSVNMYNHLRATGEDENILFSPLSVTLAMGMLELGAQGSTLKEIRHSMGYDSLK 82

Query: 491  VGK---VLKKINKAIVSKKNKDIVTVANAVFVKNGFKMEVPFVTRNKDVFQCEVRNADFE 661
             G+    LK ++  + +++++ ++ +AN++FV+NGF +   F+   K  F  EV + DF 
Sbjct: 83   NGEEFSFLKDLSHMVTAEESQYVMKIANSLFVQNGFHISEEFLQMIKKYFNAEVNHVDFS 142

Query: 662  DPASACDSINLWVRNETRGMIXXXXXXXXXXXXXTRLVLVNAVYFKGLWKSRFQPENTKK 841
               +  + IN WV N T  ++             T L L+NAVYFKG WKS+F+PENT+ 
Sbjct: 143  QNVAVANYINKWVENNTNSLLKDLVSPRDFDAV-THLALINAVYFKGSWKSQFRPENTRT 201

Query: 842  RTFVAADGKSYQVPMLAQLSVFRCGSTSTPSDL---WYNFIELPYHGESISMLIALPTES 1012
             +F   D    Q+PM+ Q   F  G  S  S+     Y  +E+PY G++ISM++ L +  
Sbjct: 202  FSFTKDDESEVQIPMMYQQGEFYYGEFSDGSNEAGGIYQVLEIPYEGDAISMMLVL-SRQ 260

Query: 1013 STPLSAIIPHISTKTIDSWMSTMVPKRVQVILPKFTAVAQTDLKEPLKVLGVTEMFDPSK 1192
              PL+ + P + T+ I+ W +++  ++V+V LP+FT   + DLK+ LK LGVTE+F    
Sbjct: 261  EVPLATLEPLVKTQLIEEWANSVKKQKVEVYLPRFTVEQEIDLKDVLKALGVTEVF-IKN 319

Query: 1193 ANFAKITRSENLPVSHILQKAKIEVSEDGTKASAATTAILIARSSP--PWFIVDRPFLFF 1366
            AN   ++ ++ + +S  + K  IEV+E+G++A+AA+  I I+R +   P  IVD PF F 
Sbjct: 320  ANLTALSDNKEIFLSKAIHKCFIEVNEEGSEAAAASGMIAISRMAVLYPQVIVDHPFFFL 379

Query: 1367 IRHNPTSAVLFMG 1405
            IR+  T  +LFMG
Sbjct: 380  IRNRRTGTILFMG 392


>ref|NP_001095524.1| serpin I2 [Bos taurus].
          Length = 405

 Score =  201 bits (512), Expect = 1e-51
 Identities = 118/349 (33%), Positives = 194/349 (55%), Gaps = 5/349 (1%)
 Frame = +2

Query: 374  DNIVISPHGIASVLGMLQLGADGRTKKQLTTVMRYGVNGVGKV---LKKINKAIVSKKNK 544
            +NI+ISP G    LGM+QLGA G+ ++Q+   +++     G+    LK    AI  KK +
Sbjct: 43   NNIIISPLGTTLALGMVQLGAKGKAQQQIRKTLKFQDTSTGEEFSELKSFFSAISEKKQE 102

Query: 545  DIVTVANAVFVKNGFKMEVPFVTRNKDVFQCEVRNADFEDPASACDSINLWVRNETRGMI 724
                +ANA++++ GF ++  ++  NK+ FQ  ++  DF++  +  ++I+ WV ++T G I
Sbjct: 103  FTFNLANALYLQEGFTVKEQYLHGNKEFFQSAIKLVDFQNAKACAETISNWVESKTDGKI 162

Query: 725  XXXXXXXXXXXXXTRLVLVNAVYFKGLWKSRFQPENTKKRTFVAADGKSYQVPMLAQLSV 904
                         TRLVLVNA+YFKG WK +F  E+T+   F   DG + ++PM+  L  
Sbjct: 163  KDMFSGEEFGPL-TRLVLVNAIYFKGDWKQKFNKEDTQLMNFTLKDGTAVKIPMMKALLR 221

Query: 905  FRCGSTSTPSDLWYNFIELPYHGESISMLIALPTESSTPLSAIIPHISTKTIDSWMSTMV 1084
             + G  S  S + Y  +ELPY G+  S++I LP E  T +  +   I+   I  W S M 
Sbjct: 222  TKYGYFS-ESSINYQVLELPYKGDEFSLIIILPAE-HTNIEEMEKLITAPQILQWFSEMQ 279

Query: 1085 PKRVQVILPKFTAVAQTDLKEPLKVLGVTEMFDPSKANFAKITRSENLPVSHILQKAKIE 1264
             + V++ LP+F    + D KE L  L +TE+F     + + IT S  + VS ++Q+   E
Sbjct: 280  EQEVEISLPRFKVEQKLDFKEALYSLNITEIFS-GGCDLSGITDSSEVYVSRVMQQVFFE 338

Query: 1265 VSEDGTKASAAT--TAILIARSSPPWFIVDRPFLFFIRHNPTSAVLFMG 1405
            ++E+G++ + +T     +I   S   FI + PFLF +++NPT ++L MG
Sbjct: 339  INEEGSEVATSTGINTPVIMSLSRNQFIANHPFLFIMKNNPTDSILLMG 387


>ref|NP_001093829.1| serpin E3 precursor [Bos taurus].
          Length = 400

 Score =  194 bits (492), Expect = 2e-49
 Identities = 128/391 (32%), Positives = 200/391 (51%), Gaps = 7/391 (1%)
 Frame = +2

Query: 254  LVATVTLPSVCSQFNPLSLEE----LGSDTGIQVFNQIVKSRPHDNIVISPHGIASVLGM 421
            L+A + LP VCS     +L E    L +D  ++++  +  +    N+V+SP G    L +
Sbjct: 5    LLALLLLP-VCSPGGASNLHEDLTLLRTDLALRLYRSVAAAGNQTNLVLSPAGAFIPLEL 63

Query: 422  LQLGADGRTKKQLTTVMRYGVNG--VGKVLKKINKAIVSKKNKDIVTVANAVFVKNGFKM 595
            LQ GA G T +QL   + Y V+   V + L+ +   + S      + +A  ++V+ G  +
Sbjct: 64   LQFGARGNTGRQLAQALGYTVHDPKVREWLQTVYAVLPSTNPGAKLELACTLYVQTGTPL 123

Query: 596  EVPFVTRNKDVFQCEVRNADFEDPASACDSINLWVRNETRGMIXXXXXXXXXXXXXT-RL 772
               FV +        +  A+F +P S     N W   +T G               + +L
Sbjct: 124  APCFVEQVSRWANSSLELANFREPNSTAMLANGWGPRQTAGDEPVGSAWERGGGAESAQL 183

Query: 773  VLVNAVYFKGLWKSRFQPENTKKRTFVAADGKSYQVPMLAQLSVFRCGSTSTPSDLWYNF 952
            VLV+ V F+  W+ +F  + T+   F  A G + +VPM+ Q++    G    P+      
Sbjct: 184  VLVSTVSFQSAWRHQFSSD-TQLLPFTCAQGLTLEVPMMYQMAEVNFGQFQDPAGHQVGV 242

Query: 953  IELPYHGESISMLIALPTESSTPLSAIIPHISTKTIDSWMSTMVPKRVQVILPKFTAVAQ 1132
            +ELPY G   S+L+ LP +  TPLS I PH++   + +W +++   R++V LP+F     
Sbjct: 243  LELPYLGNVASLLLVLPRDRDTPLSHIEPHLTASLLHAWTASLKRARMEVFLPRFRIQNH 302

Query: 1133 TDLKEPLKVLGVTEMFDPSKANFAKITRSENLPVSHILQKAKIEVSEDGTKASAATTAIL 1312
             DLK  L   GV ++FDP +AN   I+  +   VS  + KAKIEVSE+GTKASAAT  +L
Sbjct: 303  FDLKNILYSWGVIDLFDPLRANLKGISGQDGFYVSEAIHKAKIEVSEEGTKASAATALLL 362

Query: 1313 IARSSPPWFIVDRPFLFFIRHNPTSAVLFMG 1405
            + RS  P F  DRPF+FF+R   T+ V  +G
Sbjct: 363  LKRSRIPIFKADRPFIFFLREPNTAFVFSIG 393


>ref|NP_001193539.1| leukocyte elastase inhibitor [Bos taurus].
          Length = 377

 Score =  178 bits (452), Expect = 9e-45
 Identities = 118/365 (32%), Positives = 192/365 (52%), Gaps = 8/365 (2%)
 Frame = +2

Query: 335  IQVFNQIVKSRPHDNIVISPHGIASVLGMLQLGADGRTKKQLTTVMRYGVNGVGKVLKKI 514
            + +F  + +  P  NI ISP  I+S L M+ LGA G T  Q++  + +    +    + +
Sbjct: 13   VDLFLTLTEHNPAGNIFISPFSISSALAMVFLGARGDTAAQMSKALHFEGVEIHSGFQSL 72

Query: 515  NKAIVSKKNKDIVTVANAVFVKNGFKMEVPFVTRNKDVFQCEVRNADF-EDPASACDSIN 691
            N  I        + +AN +F +  +     F+   ++++  E+ + DF   P  A  +IN
Sbjct: 73   NADINKCGAPYTLKLANRLFGEKSYDFLPEFLASTQEMYSAELASVDFLRAPEDARKTIN 132

Query: 692  LWVRNETRGMIXXXXXXXXXXXXXTRLVLVNAVYFKGLWKSRFQPENTKKRTFVAADGKS 871
             WV+ +T G I             T+LVLVNA+YFKG W+ +F  E TK   F     ++
Sbjct: 133  AWVKEQTGGKIPELLASGMVDSL-TKLVLVNAIYFKGKWQEKFMVEATKDAPFRLNKKET 191

Query: 872  YQVPMLAQLSVFRCGSTSTPSDLWYNFIELPYHGESISMLIALP---TESSTPLSAIIPH 1042
              V M+ Q   F  G      DL    +ELPY G+ +SM+I LP    + +T L  I   
Sbjct: 192  KTVKMMYQKKKFPFGYI---KDLKCRVLELPYEGKDLSMVILLPDDIQDEATGLKKIEQQ 248

Query: 1043 ISTKTIDSWM--STMVPKRVQVILPKFTAVAQTDLKEPLKVLGVTEMFDPSKANFAKITR 1216
            ++ + +  W    ++    V+V LP+F      DL+EPL  LGV ++F  SKA+ + ++ 
Sbjct: 249  LTLEKLREWTRPESLDLLEVRVQLPRFKLEESYDLQEPLARLGVRDLFS-SKADLSGMSG 307

Query: 1217 SENLPVSHILQKAKIEVSEDGTKASAATTAILIARSSPP--WFIVDRPFLFFIRHNPTSA 1390
            +++L +S ++ K+ ++V+E+GT+A+AAT AI       P   F+ D PF+FFIRH P+S 
Sbjct: 308  AKDLFISKVVHKSVVDVNEEGTEAAAATGAIAEFAMLVPEEEFVADHPFIFFIRHKPSSN 367

Query: 1391 VLFMG 1405
            +LF+G
Sbjct: 368  ILFLG 372


>ref|NP_001193642.1| serpin peptidase inhibitor, clade B like [Bos taurus].
          Length = 390

 Score =  174 bits (442), Expect = 1e-43
 Identities = 127/390 (32%), Positives = 196/390 (50%), Gaps = 23/390 (5%)
 Frame = +2

Query: 305  SLEELGSDTGIQVFNQIVKSRPHDNIVISPHGIASVLGMLQLGADGRTKKQLTTVMRYG- 481
            SL E      I +F+QI KS   +NI +SP  I+S L M  LGA   T  Q+  V+ +  
Sbjct: 3    SLSEAIIHLAIDLFHQIRKSEK-ENIFLSPFSISSALAMTYLGARENTASQMQKVLHFNK 61

Query: 482  -------------VNGVGKVLKKINKAIVS-KKNKDI--VTVANAVFVKNGFKMEVPFVT 613
                         V   G V +   K +   KK+ D   ++VAN ++ +  F+    ++ 
Sbjct: 62   IAENTRGGAAKEHVEKPGNVHQHFQKLLTELKKSTDAYELSVANRLYREKEFRFLQEYMD 121

Query: 614  RNKDVFQCEVRNADFEDPASACDS-INLWVRNETRGMIXXXXXXXXXXXXXTRLVLVNAV 790
              +  +   V +ADF++ A      IN WV ++T G I             T LVLVNAV
Sbjct: 122  NVQKFYLASVESADFKNAAEESRKMINSWVESQTNGKIKDLLPKDSLDSS-TALVLVNAV 180

Query: 791  YFKGLWKSRFQPENTKKRTFVAADGKSYQVPMLAQLSVFRCGSTSTPSDLWYNFIELPYH 970
            YFKG W  +F+ E+T +  F      S  V M+ Q + F+ GS     D+    +E+PY 
Sbjct: 181  YFKGQWNQKFKEEHTAEEKFWLNKDTSKPVQMMKQTNSFKFGSLE---DVQAKILEIPYK 237

Query: 971  GESISMLIALPTESSTPLSAIIPHISTKTIDSWMS--TMVPKRVQVILPKFTAVAQTDLK 1144
            GE +SML+ LP E    L  +   ++ + +  W S   M  + V + LP+F      +L 
Sbjct: 238  GEELSMLVLLPNEVDG-LQEVEDQLTAEKLIEWTSPQNMGNREVDLYLPRFKVEESYNLV 296

Query: 1145 EPLKVLGVTEMFDPSKANFAKITRSENLPVSHILQKAKIEVSEDGTKASAATTAILIARS 1324
              L+ LG+ + F    ANF+ +  S +L VS ++ K+ +EV+E+GT+A+AA T ++  R+
Sbjct: 297  PTLQALGMVDAFCGGVANFSGMNGSRDLAVSKVIHKSFVEVTEEGTEAAAA-TGVVFTRT 355

Query: 1325 SPPW---FIVDRPFLFFIRHNPTSAVLFMG 1405
            S P+   F  D PFLF I+H  T+++LF G
Sbjct: 356  SLPFRERFRCDHPFLFLIKHIKTNSILFCG 385


>ref|XP_001254469.1| PREDICTED: serpin peptidase inhibitor, clade B like [Bos taurus].
          Length = 390

 Score =  172 bits (437), Expect = 5e-43
 Identities = 126/389 (32%), Positives = 193/389 (49%), Gaps = 22/389 (5%)
 Frame = +2

Query: 305  SLEELGSDTGIQVFNQIVKSRPHDNIVISPHGIASVLGMLQLGADGRTKKQLTTVMRYG- 481
            SL E      I +F+QI KS   +NI +SP  I+S L M  LGA   T  Q+  V+ +  
Sbjct: 3    SLSEAIIHLAIDLFHQIRKSEK-ENIFLSPFSISSALAMTYLGARENTASQMQKVLHFNK 61

Query: 482  -------------VNGVGKVLKKINKAIVS-KKNKDI--VTVANAVFVKNGFKMEVPFVT 613
                         V   G V     + +   KK+ D   ++VAN ++ +  F+    ++ 
Sbjct: 62   IAENTRGGAAKEHVEKPGNVHHHFQQLLTELKKSTDAYELSVANRLYGEKEFRFLQEYLD 121

Query: 614  RNKDVFQCEVRNADFEDPASACDS-INLWVRNETRGMIXXXXXXXXXXXXXTRLVLVNAV 790
              +  +   V +ADF++ A      IN WV ++T G I             T LVLVNAV
Sbjct: 122  NVQKFYLASVESADFKNAAEESRKMINSWVESQTNGKIKELFPEDSLKSS-TVLVLVNAV 180

Query: 791  YFKGLWKSRFQPENTKKRTFVAADGKSYQVPMLAQLSVFRCGSTSTPSDLWYNFIELPYH 970
            YFKG W  +F+ E+T +  F      S  V M+ Q + F+  S     D+    +E+PY 
Sbjct: 181  YFKGQWNQKFKEEHTAEEKFWLNKDTSKPVRMMKQTNSFKFVSLE---DVQAKILEIPYK 237

Query: 971  GESISMLIALPTESSTPLSAIIPHISTKTIDSWMS--TMVPKRVQVILPKFTAVAQTDLK 1144
            GE +SM++ LP E    L  +   ++ + + +W S   M  + V + LP+F      DL 
Sbjct: 238  GEELSMMVLLPNEVDG-LQELEDQLTAEKLIAWTSPQNMGKREVDLYLPRFKVEESYDLV 296

Query: 1145 EPLKVLGVTEMFDPSKANFAKITRSENLPVSHILQKAKIEVSEDGTKASAATTAILIARS 1324
              LK LG+ + F    ANF+ +  S +L VS ++ K+ +EV+E+GT+A+AAT  ++I  S
Sbjct: 297  PTLKALGMVDAFRGGVANFSGMNGSRDLAVSKVIHKSFVEVTEEGTEAAAATGVVIIRTS 356

Query: 1325 SP--PWFIVDRPFLFFIRHNPTSAVLFMG 1405
             P    F  D PFLF I+H  T+++LF G
Sbjct: 357  LPFRERFRCDHPFLFLIKHIKTNSILFCG 385


>ref|XP_001254729.1| PREDICTED: serpin peptidase inhibitor, clade B like [Bos taurus].
          Length = 391

 Score =  171 bits (432), Expect = 2e-42
 Identities = 126/390 (32%), Positives = 192/390 (49%), Gaps = 23/390 (5%)
 Frame = +2

Query: 305  SLEELGSDTGIQVFNQIVKSRPHDNIVISPHGIASVLGMLQLGADGRTKKQLTTVMRYG- 481
            SL E      I +F+QI KS   +NI +SP  I+S L M  LGA   T  Q+  V+ +  
Sbjct: 3    SLSEAIIHLAIDLFHQIRKSEK-ENIFLSPFSISSALAMTYLGARENTASQMQKVLHFNN 61

Query: 482  -------------VNGVGKVLKKINKAIVS-KKNKDI--VTVANAVFVKNGFKMEVPFVT 613
                         V   G V     K +   KK+ D   ++VAN ++ +  F+    ++ 
Sbjct: 62   IAENTRGGAAKEHVEKPGNVHHHFQKLLTELKKSTDAYELSVANRLYGEKEFQFLQEYLD 121

Query: 614  RNKDVFQCEVRNADFEDPASACDS-INLWVRNETRGMIXXXXXXXXXXXXXTRLVLVNAV 790
              K  +   V +ADF++ A      IN WV ++T G I             T LVLVNAV
Sbjct: 122  NVKKFYLASVESADFKNAAEESRKMINSWVESQTNGKIKDLFPKDSLKSS-TALVLVNAV 180

Query: 791  YFKGLWKSRFQPENTKKRTFVAADGKSYQVPMLAQLSVFRCGSTSTPSDLWYNFIELPYH 970
            YFKG W  +F+ E+T +  F      S  V M+ Q + F+  S     D+    +E+PY 
Sbjct: 181  YFKGQWNQKFKEEHTAEEKFWLNKDTSKPVRMMKQTNSFKFVSLE---DVQAKILEIPYK 237

Query: 971  GESISMLIALPTESSTPLSAIIPHISTKTIDSWMS--TMVPKRVQVILPKFTAVAQTDLK 1144
            GE +SM++ LP E    L  +   ++ + + +W S   M  + V + LP+F      DL 
Sbjct: 238  GEELSMMVLLPNEVDG-LQELEDQLTAEKLIAWTSPQNMGKREVDLYLPRFKVEESYDLV 296

Query: 1145 EPLKVLGVTEMFDPSKANFAKITRSENLPVSHILQKAKIEVSEDGTKASAAT---TAILI 1315
              LK LG+ + F+   ANF+ +T   +L VS +  K+ +EV+E+GT+A+AAT    A++ 
Sbjct: 297  PTLKALGMVDAFNDKVANFSGMTGRRDLVVSKVFHKSFVEVTEEGTEAAAATGVGVAVIT 356

Query: 1316 ARSSPPWFIVDRPFLFFIRHNPTSAVLFMG 1405
            +      F  D PFLF I+H  T+++LF G
Sbjct: 357  SLPIRESFRCDHPFLFLIKHIKTNSILFGG 386


  Database: RefSeq49_BP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 17,681,374
  Number of sequences in database:  33,088
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 49,197,847
Number of extensions: 1302176
Number of successful extensions: 4466
Number of sequences better than 1.0e-05: 89
Number of HSP's gapped: 4114
Number of HSP's successfully gapped: 90
Length of query: 468
Length of database: 17,681,374
Length adjustment: 106
Effective length of query: 362
Effective length of database: 14,174,046
Effective search space: 5131004652
Effective search space used: 5131004652
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

Search to RefSeqCP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-003048
         (1406 letters)

Database: RefSeq49_CP.fasta 
           33,336 sequences; 18,874,504 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_851657.1| PREDICTED: similar to Glia derived nexin precur...   720   0.0  
Alignment   gi|XP_864163.1| PREDICTED: similar to Glia derived nexin precur...   713   0.0  
Alignment   gi|NP_001184024.1| plasminogen activator inhibitor 1 [Canis lup...   279   4e-75
Alignment   gi|XP_535853.2| PREDICTED: similar to Neuroserpin precursor (Se...   226   4e-59
Alignment   gi|XP_851407.1| PREDICTED: similar to serine/cysteine proteinas...   216   6e-56
Alignment   gi|XP_541074.2| PREDICTED: similar to Squamous cell carcinoma a...   174   2e-43
Alignment   gi|XP_856912.1| PREDICTED: similar to serine (or cysteine) prot...   170   3e-42
Alignment   gi|XP_856871.1| PREDICTED: similar to serine (or cysteine) prot...   166   4e-41
Alignment   gi|XP_848751.1| PREDICTED: similar to serine (or cysteine) prot...   164   1e-40
Alignment   gi|XP_541073.2| PREDICTED: similar to serine (or cysteine) prot...   164   2e-40

>ref|XP_851657.1| PREDICTED: similar to Glia derived nexin precursor (GDN) (Protease
            nexin I) (PN-1) (Protease inhibitor 7) isoform 1 [Canis
            familiaris].
          Length = 397

 Score =  720 bits (1858), Expect = 0.0
 Identities = 360/392 (91%), Positives = 369/392 (94%)
 Frame = +2

Query: 230  MNWHFPFFLVATVTLPSVCSQFNPLSLEELGSDTGIQVFNQIVKSRPHDNIVISPHGIAS 409
            MNWHF FFLVA VTLPSVCSQFNPLSLEELGS+TGIQVFNQIV+SRPHDN+V+SPHGIAS
Sbjct: 1    MNWHFSFFLVAAVTLPSVCSQFNPLSLEELGSNTGIQVFNQIVRSRPHDNVVVSPHGIAS 60

Query: 410  VLGMLQLGADGRTKKQLTTVMRYGVNGVGKVLKKINKAIVSKKNKDIVTVANAVFVKNGF 589
            VLGMLQLGADGRTKKQLTTVMRYGVNGVGKVLKKINKAI SKKNKDIVTVANAVFVKNGF
Sbjct: 61   VLGMLQLGADGRTKKQLTTVMRYGVNGVGKVLKKINKAIGSKKNKDIVTVANAVFVKNGF 120

Query: 590  KMEVPFVTRNKDVFQCEVRNADFEDPASACDSINLWVRNETRGMIXXXXXXXXXXXXXTR 769
            KMEVPFVTRNKDVFQCEV+N  FEDPASACDSIN+WVRNETRGMI             TR
Sbjct: 121  KMEVPFVTRNKDVFQCEVQNVSFEDPASACDSINVWVRNETRGMIDNLLSPNLIDGALTR 180

Query: 770  LVLVNAVYFKGLWKSRFQPENTKKRTFVAADGKSYQVPMLAQLSVFRCGSTSTPSDLWYN 949
            LVLVNAVYFKGLWKSRFQPENTKKRTFV ADGKSYQVPMLAQLSVFRCGSTSTP+DLWYN
Sbjct: 181  LVLVNAVYFKGLWKSRFQPENTKKRTFVTADGKSYQVPMLAQLSVFRCGSTSTPNDLWYN 240

Query: 950  FIELPYHGESISMLIALPTESSTPLSAIIPHISTKTIDSWMSTMVPKRVQVILPKFTAVA 1129
            FIELPYHGESISMLIALPTESSTPLSAI+PHISTKTIDSWMS MVPKRVQVILPKFTAVA
Sbjct: 241  FIELPYHGESISMLIALPTESSTPLSAIVPHISTKTIDSWMSAMVPKRVQVILPKFTAVA 300

Query: 1130 QTDLKEPLKVLGVTEMFDPSKANFAKITRSENLPVSHILQKAKIEVSEDGTKASAATTAI 1309
            QTDLKEPLK LG+TEMFDPSKANFAKITRSENL VSHILQKAKIEVSEDGTKASAATTAI
Sbjct: 301  QTDLKEPLKALGITEMFDPSKANFAKITRSENLHVSHILQKAKIEVSEDGTKASAATTAI 360

Query: 1310 LIARSSPPWFIVDRPFLFFIRHNPTSAVLFMG 1405
            LIARSSPPWFIVDRPFLFFIRHNPT AVLFMG
Sbjct: 361  LIARSSPPWFIVDRPFLFFIRHNPTGAVLFMG 392


>ref|XP_864163.1| PREDICTED: similar to Glia derived nexin precursor (GDN) (Protease
            nexin I) (PN-1) (Protease inhibitor 7) isoform 2 [Canis
            familiaris].
          Length = 398

 Score =  713 bits (1840), Expect = 0.0
 Identities = 359/393 (91%), Positives = 368/393 (93%), Gaps = 1/393 (0%)
 Frame = +2

Query: 230  MNWHFPFFLVATVTLPSVCSQFNPLSLEELGSDTGIQVFNQIVKSRPHDNIVISPHGIAS 409
            MNWHF FFLVA VTLPSVCSQFNPLSLEELGS+TGIQVFNQIV+SRPHDN+V+SPHGIAS
Sbjct: 1    MNWHFSFFLVAAVTLPSVCSQFNPLSLEELGSNTGIQVFNQIVRSRPHDNVVVSPHGIAS 60

Query: 410  VLGMLQLGADGRTKKQLTTVMRYGVNGVGKVLKKINKAIVSKKNKDIVTVANAVFVKNGF 589
            VLGMLQLGADGRTKKQLTTVMRYGVNGVGKVLKKINKAI SKKNKDIVTVANAVFVKNGF
Sbjct: 61   VLGMLQLGADGRTKKQLTTVMRYGVNGVGKVLKKINKAIGSKKNKDIVTVANAVFVKNGF 120

Query: 590  KMEVPFVTRNKDVFQCEVRNADFEDPASACDSINLWVRNETRGMIXXXXXXXXXXXXXTR 769
            KMEVPFVTRNKDVFQCEV+N  FEDPASACDSIN+WVRNETRGMI             TR
Sbjct: 121  KMEVPFVTRNKDVFQCEVQNVSFEDPASACDSINVWVRNETRGMIDNLLSPNLIDGALTR 180

Query: 770  LVLVNAVYFKGLWKSRFQPENTKKRTFVAADGKSYQVPMLAQLSVFRCGSTSTPSDLWYN 949
            LVLVNAVYFKGLWKSRFQPENTKKRTFV ADGKSYQVPMLAQLSVFRCGSTSTP+DLWYN
Sbjct: 181  LVLVNAVYFKGLWKSRFQPENTKKRTFVTADGKSYQVPMLAQLSVFRCGSTSTPNDLWYN 240

Query: 950  FIELPYHGESISMLIALPTESSTPLSAIIPHISTKTIDSWMSTMVPKRVQVILPKFTAVA 1129
            FIELPYHGESISMLIALPTESSTPLSAI+PHISTKTIDSWMS MVPKRVQVILPKFTAVA
Sbjct: 241  FIELPYHGESISMLIALPTESSTPLSAIVPHISTKTIDSWMSAMVPKRVQVILPKFTAVA 300

Query: 1130 QTDLKEPLKVLGVTEMFDPSKANFAKITR-SENLPVSHILQKAKIEVSEDGTKASAATTA 1306
            QTDLKEPLK LG+TEMFDPSKANFAKIT  SENL VSHILQKAKIEVSEDGTKASAATTA
Sbjct: 301  QTDLKEPLKALGITEMFDPSKANFAKITTGSENLHVSHILQKAKIEVSEDGTKASAATTA 360

Query: 1307 ILIARSSPPWFIVDRPFLFFIRHNPTSAVLFMG 1405
            ILIARSSPPWFIVDRPFLFFIRHNPT AVLFMG
Sbjct: 361  ILIARSSPPWFIVDRPFLFFIRHNPTGAVLFMG 393


>ref|NP_001184024.1| plasminogen activator inhibitor 1 [Canis lupus familiaris].
          Length = 402

 Score =  279 bits (714), Expect = 4e-75
 Identities = 147/365 (40%), Positives = 221/365 (60%), Gaps = 2/365 (0%)
 Frame = +2

Query: 317  LGSDTGIQVFNQIVKSRPHDNIVISPHGIASVLGMLQLGADGRTKKQLTTVMRYGVN--G 490
            L +D G++VF ++ ++    N+V SP+G+ASVL MLQL   G T +Q+   M++ ++  G
Sbjct: 34   LATDFGVKVFQEVARASKDRNMVFSPYGVASVLAMLQLTTAGETCRQIQEAMQFQIDEKG 93

Query: 491  VGKVLKKINKAIVSKKNKDIVTVANAVFVKNGFKMEVPFVTRNKDVFQCEVRNADFEDPA 670
            +   L+++ K ++   NKD ++ A+A+FV+   K+   F+     +F+  V+  DF +  
Sbjct: 94   MAPALRQLYKELMGPWNKDEISTADAIFVQRDLKLVHGFMPHFFRLFRTTVKQVDFSEVE 153

Query: 671  SACDSINLWVRNETRGMIXXXXXXXXXXXXXTRLVLVNAVYFKGLWKSRFQPENTKKRTF 850
             A   +N WV+  T+GMI             TRL+LVNA+YF G WK+ F    T  R F
Sbjct: 154  RARFIVNDWVKRHTKGMIGNLLGRGAVDQL-TRLMLVNALYFNGQWKTPFPESGTHHRLF 212

Query: 851  VAADGKSYQVPMLAQLSVFRCGSTSTPSDLWYNFIELPYHGESISMLIALPTESSTPLSA 1030
              +DG +  VPM+AQ + F     STPS  +Y+ +ELPYHG+++SM IA P E   PLSA
Sbjct: 213  HKSDGSTVSVPMMAQTNKFNYTEFSTPSGHYYDILELPYHGDTLSMFIAAPYEKEVPLSA 272

Query: 1031 IIPHISTKTIDSWMSTMVPKRVQVILPKFTAVAQTDLKEPLKVLGVTEMFDPSKANFAKI 1210
            +   +  + I  W   M  +   ++LPKF+   + +L+ PL+ LG+T+MF P+ A+F+ +
Sbjct: 273  LTNILDAQLISQWKGNMTRQLRLLVLPKFSLETEVNLRRPLENLGMTDMFRPNLADFSSL 332

Query: 1211 TRSENLPVSHILQKAKIEVSEDGTKASAATTAILIARSSPPWFIVDRPFLFFIRHNPTSA 1390
            +  E L VS  LQK KIEV+E GT AS++T  I+ AR +P   I+DRPFLF +RHNPT  
Sbjct: 333  SNQEVLYVSRALQKVKIEVNESGTVASSSTAIIVSARMAPEEIIMDRPFLFVVRHNPTGT 392

Query: 1391 VLFMG 1405
            VLFMG
Sbjct: 393  VLFMG 397


>ref|XP_535853.2| PREDICTED: similar to Neuroserpin precursor (Serpin I1) (Protease
            inhibitor 12) [Canis familiaris].
          Length = 538

 Score =  226 bits (576), Expect = 4e-59
 Identities = 127/373 (34%), Positives = 210/373 (56%), Gaps = 8/373 (2%)
 Frame = +2

Query: 311  EELGSDTGIQVFNQIVKSRPHDNIVISPHGIASVLGMLQLGADGRTKKQLTTVMRYGVNG 490
            +E  ++  + ++N +  +   +NI+ SP  +   +GM++LGA G T K++   M Y    
Sbjct: 151  DETIAELSVNMYNHLRATGEDENILFSPLSVTFAMGMMELGAQGSTLKEIRHSMGYDSLK 210

Query: 491  VG---KVLKKINKAIVSKKNKDIVTVANAVFVKNGFKMEVPFVTRNKDVFQCEVRNADFE 661
             G     LK  +  + +K+++ ++ +AN++FV+NGF +   F+   K  F+ EV + DF 
Sbjct: 211  NGDEFSFLKDFSNMVTAKESQYVMKIANSLFVQNGFHVNEEFLQMLKKYFKAEVNHVDFS 270

Query: 662  DPASACDSINLWVRNETRGMIXXXXXXXXXXXXXTRLVLVNAVYFKGLWKSRFQPENTKK 841
               +  + +N WV N T  ++             T L L+NAVYFKG WKS+F+PENT+ 
Sbjct: 271  QNIAVANLVNKWVENNTNNLLKDLVSPRDFDAG-THLALINAVYFKGNWKSQFRPENTRT 329

Query: 842  RTFVAADGKSYQVPMLAQLSVFRCGSTSTPSDL---WYNFIELPYHGESISMLIALPTES 1012
             +F   D    Q+PM+ Q   F  G  S  S+     Y  +E+PY G+ ISM++ L +  
Sbjct: 330  FSFTKDDESEVQIPMMYQQGEFYYGEFSDGSNEAGGIYQVLEIPYEGDEISMMLVL-SRQ 388

Query: 1013 STPLSAIIPHISTKTIDSWMSTMVPKRVQVILPKFTAVAQTDLKEPLKVLGVTEMFDPSK 1192
              PL+ + P +  + I+ W +++  ++V+V LP+FT   + DLKE LK LG+TE+F    
Sbjct: 389  EVPLATLEPLVKAQLIEEWANSVKKQKVEVYLPRFTVEQEIDLKEVLKALGITEVF-IKN 447

Query: 1193 ANFAKITRSENLPVSHILQKAKIEVSEDGTKASAATTAILIARSSP--PWFIVDRPFLFF 1366
            AN   ++ ++ + +S  + K+ IEV+E+G++A+A +  I I+R +   P  IVD PF F 
Sbjct: 448  ANLTALSDNKEIFLSKAIHKSFIEVNEEGSEAAATSGMIAISRMAVLYPQVIVDHPFFFL 507

Query: 1367 IRHNPTSAVLFMG 1405
            IR+  T  VLFMG
Sbjct: 508  IRNRRTGTVLFMG 520


>ref|XP_851407.1| PREDICTED: similar to serine/cysteine proteinase inhibitor, clade I,
            member 2 isoform 1 [Canis familiaris].
          Length = 422

 Score =  216 bits (549), Expect = 6e-56
 Identities = 126/349 (36%), Positives = 198/349 (56%), Gaps = 5/349 (1%)
 Frame = +2

Query: 374  DNIVISPHGIASVLGMLQLGADGRTKKQLTTVMRYGVNGVGK---VLKKINKAIVSKKNK 544
            +NI+ SP G   VLGM+QLGA GR ++Q+   ++   N  G+   VLK    AI  KK +
Sbjct: 60   NNIIFSPLGTTLVLGMIQLGAKGRAQQQIRQTLKLQENSTGEEFSVLKSFFSAISEKKQE 119

Query: 545  DIVTVANAVFVKNGFKMEVPFVTRNKDVFQCEVRNADFEDPASACDSINLWVRNETRGMI 724
                +ANA++++ GF ++  ++  NK+ FQ  ++  DF+D  ++ ++I+ WV ++T G I
Sbjct: 120  FTFNLANALYLQEGFTVKEQYLHSNKEFFQSAIKLVDFQDAKTSAETISTWVESKTDGKI 179

Query: 725  XXXXXXXXXXXXXTRLVLVNAVYFKGLWKSRFQPENTKKRTFVAADGKSYQVPMLAQLSV 904
                         TRLVLVNA+YFKG WK +F+ E+T+   F   DG + ++PM+  L  
Sbjct: 180  KDMFSGEDFGPL-TRLVLVNAIYFKGDWKQKFRKEDTQLTNFTKKDGAAVKIPMMKALLR 238

Query: 905  FRCGSTSTPSDLWYNFIELPYHGESISMLIALPTESSTPLSAIIPHISTKTIDSWMSTMV 1084
             + G  S PS + Y  +ELPY G+  S++I LP E    +  +   I+   I  W S M 
Sbjct: 239  TKYGYFSEPS-MNYQVLELPYKGDGFSLIIILPAE-DVNIEEMEKRITAHQILKWFSEMQ 296

Query: 1085 PKRVQVILPKFTAVAQTDLKEPLKVLGVTEMFDPSKANFAKITRSENLPVSHILQKAKIE 1264
             + V+V LP+F    + D KE L  L +TE+F     + + IT S  + VS ++Q    E
Sbjct: 297  EEEVEVSLPRFKVEQKLDFKEALYSLNMTEVFS-GGCDLSGITDSAEVFVSQVMQHIFFE 355

Query: 1265 VSEDGTKASAATTAIL--IARSSPPWFIVDRPFLFFIRHNPTSAVLFMG 1405
            ++EDG++A+ AT   +  I   +   FI + PFLF +++NPT ++LFMG
Sbjct: 356  INEDGSEAATATGMHIPAIMSLAHNQFIANHPFLFIVKNNPTESILFMG 404


>ref|XP_541074.2| PREDICTED: similar to Squamous cell carcinoma antigen 2 (SCCA-2)
            (Leupin) isoform 1 [Canis familiaris].
          Length = 389

 Score =  174 bits (441), Expect = 2e-43
 Identities = 122/388 (31%), Positives = 194/388 (50%), Gaps = 21/388 (5%)
 Frame = +2

Query: 305  SLEELGSDTGIQVFNQIVKSRPHDNIVISPHGIASVLGMLQLGADGRTKKQLTTVMRYG- 481
            SL    +     +F Q   S+  DNI  SP  I+S L M  LGA   T  ++  V+ +  
Sbjct: 3    SLSAANTRFAFDLFQQFKTSKKGDNIFFSPLSISSALAMTYLGAKENTALEIGKVLHFNE 62

Query: 482  -------------VNGVGKVLKKINKAIVS-KKNKDI--VTVANAVFVKNGFKMEVPFVT 613
                         V  +  V  +  K +   KK  D   + +AN  + +  ++    ++ 
Sbjct: 63   ATESTTGRTTTDHVEKMENVHHQFQKLLTELKKPTDAYELNMANKFYGEKKYQFLQEYMD 122

Query: 614  RNKDVFQCEVRNADFEDPASAC-DSINLWVRNETRGMIXXXXXXXXXXXXXTRLVLVNAV 790
              K  +   V + DF + A      IN WV ++T   I             T LVLVNAV
Sbjct: 123  NIKKFYLASVESVDFNNAAEESRKKINSWVESQTNEKIKDMFPKDSLNH--TILVLVNAV 180

Query: 791  YFKGLWKSRFQPENTKKRTFVAADGKSYQVPMLAQLSVFRCGSTSTPSDLWYNFIELPYH 970
            YFKG W ++F  +NT ++ F      S  V M+ Q +VF   S     DL    +E+PY 
Sbjct: 181  YFKGQWDTKFDTKNTVEKEFWLDKDTSKPVQMMRQSNVFNFTSLE---DLQAKILEIPYK 237

Query: 971  GESISMLIALPTESSTPLSAIIPHISTKTIDSWMST--MVPKRVQVILPKFTAVAQTDLK 1144
            G+ +SM++ LP E    L  +   ++ + +  W S+  M   +V + LP+F      +LK
Sbjct: 238  GKDLSMMLLLPHEVDG-LQKLEDQLTAENLIEWTSSQNMSNGQVDLYLPRFKVEESYELK 296

Query: 1145 EPLKVLGVTEMFDPSKANFAKITRSENLPVSHILQKAKIEVSEDGTKASAATTAILIARS 1324
              LK LG+ + F+  +ANF+ +T  ++L VS +  K+ +EV+E+GT+A+A+T   +IA+S
Sbjct: 297  ATLKALGMVDAFNTKRANFSGMTGRQDLVVSKVRHKSFVEVTEEGTEAAASTDVEVIAKS 356

Query: 1325 SPPW-FIVDRPFLFFIRHNPTSAVLFMG 1405
            +P + F  D PFLFFI+HN T+++LF+G
Sbjct: 357  APIYPFHCDHPFLFFIKHNKTNSILFLG 384


>ref|XP_856912.1| PREDICTED: similar to serine (or cysteine) proteinase inhibitor,
            clade B (ovalbumin), member 8 isoform a isoform 4 [Canis
            familiaris].
          Length = 378

 Score =  170 bits (430), Expect = 3e-42
 Identities = 113/375 (30%), Positives = 187/375 (49%), Gaps = 9/375 (2%)
 Frame = +2

Query: 308  LEELGSDTGIQVFNQIVKSRPHDNIVISPHGIASVLGMLQLGADGRTKKQLTTVMRYGVN 487
            L E      I +   + +     N+  SP  I+S L M+ +GA G T  Q++ V+     
Sbjct: 4    LYEANGSFAINLLKMLGREDSSRNVFCSPLSISSALAMVFMGAKGNTAAQMSQVLVANTL 63

Query: 488  GVGKVLKKINKAIVSKKNKD----IVTVANAVFVKNGFKMEVPFVTRNKDVFQCEVRNAD 655
            G    + +  ++++++ NK     ++  AN +F +        +    +  +Q E+    
Sbjct: 64   GKDGDIHQGFRSLLAEVNKSGTQYLLRTANRLFGEETCDFLPAYRESCQKFYQAELEELS 123

Query: 656  FEDPASAC-DSINLWVRNETRGMIXXXXXXXXXXXXXTRLVLVNAVYFKGLWKSRFQPEN 832
            F      C + IN WV  +T G I             T+LVLVNA+YFKG W  +F  +N
Sbjct: 124  FAKDTEECREHINHWVTEKTEGKISEILGAGTVDAL-TKLVLVNAIYFKGKWHEQFDRKN 182

Query: 833  TKKRTFVAADGKSYQVPMLAQLSVFRCGSTSTPSDLWYNFIELPYHGESISMLIALPTES 1012
            T+   F         V M+ + + F+ G      D+    +ELPY GE +SM+I LP + 
Sbjct: 183  TRGMPFKINQVGKKTVQMMFKQAKFKMGYVD---DVHTQILELPYAGEELSMVILLP-DD 238

Query: 1013 STPLSAIIPHISTKTIDSWMS--TMVPKRVQVILPKFTAVAQTDLKEPLKVLGVTEMFDP 1186
            +T L+ +   ++ +   +W     M   +VQV LP+       DL+  L+ +G+ + F+ 
Sbjct: 239  NTDLAEVEKALTYEKFRAWTDPENMTKNKVQVFLPRLKLEESYDLESFLRSVGMIDAFEE 298

Query: 1187 SKANFAKITRSENLPVSHILQKAKIEVSEDGTKASAATTAILIARSS--PPWFIVDRPFL 1360
            +KA+F+ ++  +N+PVS +  K  +EV+E+GT+A+AAT  +  AR S   P F  D PFL
Sbjct: 299  AKADFSGMSAKKNVPVSKVAHKCFVEVNEEGTEAAAATAVVRNARCSRAEPRFCADHPFL 358

Query: 1361 FFIRHNPTSAVLFMG 1405
            FFI H  T+++LF G
Sbjct: 359  FFIIHRHTNSILFCG 373


>ref|XP_856871.1| PREDICTED: similar to serine (or cysteine) proteinase inhibitor,
            clade B (ovalbumin), member 8 isoform a isoform 3 [Canis
            familiaris].
          Length = 379

 Score =  166 bits (421), Expect = 4e-41
 Identities = 114/380 (30%), Positives = 184/380 (48%), Gaps = 14/380 (3%)
 Frame = +2

Query: 308  LEELGSDTGIQVFNQIVKSRPHDNIVISPHGIASVLGMLQLGADGRTKKQLTTVMRYGV- 484
            L E      I +   + +     N+  SP  I+S L M+ +GA G T  Q++ V      
Sbjct: 4    LYEANGSFAINLLKMLGREDSSRNVFCSPLSISSALAMVFMGAKGNTAAQMSQVFSVDFC 63

Query: 485  --------NGVGKVLKKINKAIVSKKNKDIVTVANAVFVKNGFKMEVPFVTRNKDVFQCE 640
                     G   +L ++NK+      + ++  AN +F +        +    +  +Q E
Sbjct: 64   SFLDGDIHQGFRSLLAEVNKS----GTQYLLRTANRLFGEETCDFLPAYRESCQKFYQAE 119

Query: 641  VRNADFEDPASAC-DSINLWVRNETRGMIXXXXXXXXXXXXXTRLVLVNAVYFKGLWKSR 817
            +    F      C + IN WV  +T G I             T+LVLVNA+YFKG W  +
Sbjct: 120  LEELSFAKDTEECREHINHWVTEKTEGKISEILGAGTVDAL-TKLVLVNAIYFKGKWHEQ 178

Query: 818  FQPENTKKRTFVAADGKSYQVPMLAQLSVFRCGSTSTPSDLWYNFIELPYHGESISMLIA 997
            F  +NT+   F         V M+ + + F+ G      D+    +ELPY GE +SM+I 
Sbjct: 179  FDRKNTRGMPFKINQVGKKTVQMMFKQAKFKMGYVD---DVHTQILELPYAGEELSMVIL 235

Query: 998  LPTESSTPLSAIIPHISTKTIDSWMS--TMVPKRVQVILPKFTAVAQTDLKEPLKVLGVT 1171
            LP + +T L+ +   ++ +   +W     M   +VQV LP+       DL+  L+ +G+ 
Sbjct: 236  LP-DDNTDLAEVEKALTYEKFRAWTDPENMTKNKVQVFLPRLKLEESYDLESFLRSVGMI 294

Query: 1172 EMFDPSKANFAKITRSENLPVSHILQKAKIEVSEDGTKASAATTAILIARSS--PPWFIV 1345
            + F+ +KA+F+ ++  +N+PVS +  K  +EV+E+GT+A+AAT  +  AR S   P F  
Sbjct: 295  DAFEEAKADFSGMSAKKNVPVSKVAHKCFVEVNEEGTEAAAATAVVRNARCSRAEPRFCA 354

Query: 1346 DRPFLFFIRHNPTSAVLFMG 1405
            D PFLFFI H  T+++LF G
Sbjct: 355  DHPFLFFIIHRHTNSILFCG 374


>ref|XP_848751.1| PREDICTED: similar to serine (or cysteine) proteinase inhibitor,
            clade B (ovalbumin), member 8 isoform a isoform 1 [Canis
            familiaris].
          Length = 374

 Score =  164 bits (416), Expect = 1e-40
 Identities = 113/376 (30%), Positives = 186/376 (49%), Gaps = 10/376 (2%)
 Frame = +2

Query: 308  LEELGSDTGIQVFNQIVKSRPHDNIVISPHGIASVLGMLQLGADGRTKKQLTTVMRYGVN 487
            L E      I +   + +     N+  SP  I+S L M+ +GA G T  Q++  +    +
Sbjct: 4    LYEANGSFAINLLKMLGREDSSRNVFCSPLSISSALAMVFMGAKGNTAAQMSQALCLSRD 63

Query: 488  G-----VGKVLKKINKAIVSKKNKDIVTVANAVFVKNGFKMEVPFVTRNKDVFQCEVRNA 652
            G        +L ++NK+      + ++  AN +F +        +    +  +Q E+   
Sbjct: 64   GDIHQGFRSLLAEVNKS----GTQYLLRTANRLFGEETCDFLPAYRESCQKFYQAELEEL 119

Query: 653  DFEDPASAC-DSINLWVRNETRGMIXXXXXXXXXXXXXTRLVLVNAVYFKGLWKSRFQPE 829
             F      C + IN WV  +T G I             T+LVLVNA+YFKG W  +F  +
Sbjct: 120  SFAKDTEECREHINHWVTEKTEGKISEILGAGTVDAL-TKLVLVNAIYFKGKWHEQFDRK 178

Query: 830  NTKKRTFVAADGKSYQVPMLAQLSVFRCGSTSTPSDLWYNFIELPYHGESISMLIALPTE 1009
            NT+   F     +   V M+ + + F+ G      D+    +ELPY GE +SM+I LP +
Sbjct: 179  NTRGMPFKINQERK-TVQMMFKQAKFKMGYVD---DVHTQILELPYAGEELSMVILLP-D 233

Query: 1010 SSTPLSAIIPHISTKTIDSWMS--TMVPKRVQVILPKFTAVAQTDLKEPLKVLGVTEMFD 1183
             +T L+ +   ++ +   +W     M   +VQV LP+       DL+  L+ +G+ + F+
Sbjct: 234  DNTDLAEVEKALTYEKFRAWTDPENMTKNKVQVFLPRLKLEESYDLESFLRSVGMIDAFE 293

Query: 1184 PSKANFAKITRSENLPVSHILQKAKIEVSEDGTKASAATTAILIARSS--PPWFIVDRPF 1357
             +KA+F+ ++  +N+PVS +  K  +EV+E+GT+A+AAT  +  AR S   P F  D PF
Sbjct: 294  EAKADFSGMSAKKNVPVSKVAHKCFVEVNEEGTEAAAATAVVRNARCSRAEPRFCADHPF 353

Query: 1358 LFFIRHNPTSAVLFMG 1405
            LFFI H  T+++LF G
Sbjct: 354  LFFIIHRHTNSILFCG 369


>ref|XP_541073.2| PREDICTED: similar to serine (or cysteine) proteinase inhibitor,
            clade B (ovalbumin), member 11 [Canis familiaris].
          Length = 397

 Score =  164 bits (415), Expect = 2e-40
 Identities = 108/390 (27%), Positives = 193/390 (49%), Gaps = 23/390 (5%)
 Frame = +2

Query: 305  SLEELGSDTGIQVFNQIVKSRPHDNIVISPHGIASVLGMLQLGADGRTKKQLTTVMRYG- 481
            +L    ++  + VF ++  +   DNI  SP  +   L M+ LGA G + +Q+  V+ +  
Sbjct: 3    TLSTANTEFCLDVFKELNSNNVGDNIFFSPLSLLYALSMVLLGARGNSAEQMEKVLHFSH 62

Query: 482  --------------VNGVGKVLKKINKAIVSKKNKD---IVTVANAVFVKNGFKMEVPFV 610
                           +  G++  +           D    +++AN ++          ++
Sbjct: 63   MTQSLKPEFKDSAKCSQAGRIHSEFGVLFSQINQPDSNYTLSMANRLYGTKAMVFHQQYL 122

Query: 611  TRNKDVFQCEVRNADFED-PASACDSINLWVRNETRGMIXXXXXXXXXXXXXTRLVLVNA 787
            T ++ ++Q   +  DFE  P     +IN WV ++T G +               +VLVNA
Sbjct: 123  TCSEKLYQAMPQTVDFEQSPEETRKTINAWVESKTNGKVTNLFGKGTIDPSCV-MVLVNA 181

Query: 788  VYFKGLWKSRFQPENTKKRTFVAADGKSYQVPMLAQLSVFRCGSTSTPSDLWYNFIELPY 967
            +YFKG W+++FQ   T K  F   +GKS  V M+ Q   ++      P       +ELPY
Sbjct: 182  IYFKGQWQNKFQERETVKMPFQLNEGKSIIVEMMYQTGTYKLAFIKEPQ---MQVLELPY 238

Query: 968  HGESISMLIALPTESSTPLSAIIPHISTKTIDSWMST--MVPKRVQVILPKFTAVAQTDL 1141
                +SM+I LP  +++ L  I   ++TKT + W S+  MV + V+V +P+F    + +L
Sbjct: 239  VNNKLSMIILLPAGTAS-LEQIEKELNTKTFNEWTSSANMVEREVEVHIPRFKLEIKYEL 297

Query: 1142 KEPLKVLGVTEMFDPSKANFAKITRSENLPVSHILQKAKIEVSEDGTKASAATTAILIAR 1321
            K  L  LG+T++F+   A+ + I+  + L +S ++ ++ ++V+E+GT+A+AAT    + +
Sbjct: 298  KSLLNSLGMTDVFNEITADLSGISPVDGLYLSKVIHQSYVDVNEEGTEAAAATGDSFVVK 357

Query: 1322 SSP--PWFIVDRPFLFFIRHNPTSAVLFMG 1405
              P    F+ + PFLFFIR + T+ +LF G
Sbjct: 358  RLPIRARFLANHPFLFFIRLSHTNTILFCG 387


  Database: RefSeq49_CP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,874,504
  Number of sequences in database:  33,336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 51,280,357
Number of extensions: 1335837
Number of successful extensions: 4326
Number of sequences better than 1.0e-05: 44
Number of HSP's gapped: 4191
Number of HSP's successfully gapped: 47
Length of query: 468
Length of database: 18,874,504
Length adjustment: 106
Effective length of query: 362
Effective length of database: 15,340,888
Effective search space: 5553401456
Effective search space used: 5553401456
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

Search to RefSeqHP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-003048
         (1406 letters)

Database: RefSeq49_HP.fasta 
           32,964 sequences; 18,297,164 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001130002.1| glia-derived nexin isoform c precursor [Homo...   709   0.0  
Alignment   gi|NP_001130000.1| glia-derived nexin isoform b precursor [Homo...   701   0.0  
Alignment   gi|NP_006207.1| glia-derived nexin isoform a precursor [Homo sa...   694   0.0  
Alignment   gi|NP_000593.1| plasminogen activator inhibitor 1 isoform 1 pre...   280   2e-75
Alignment   gi|NP_001158885.1| plasminogen activator inhibitor 1 isoform 2 ...   265   8e-71
Alignment   gi|NP_001116224.1| neuroserpin precursor [Homo sapiens].             228   1e-59
Alignment   gi|NP_005016.1| neuroserpin precursor [Homo sapiens].                228   1e-59
Alignment   gi|NP_006208.1| serpin I2 precursor [Homo sapiens].                  207   1e-53
Alignment   gi|NP_001094790.1| serpin E3 precursor [Homo sapiens].               191   2e-48
Alignment   gi|NP_000479.1| antithrombin-III precursor [Homo sapiens].           171   2e-42

>ref|NP_001130002.1| glia-derived nexin isoform c precursor [Homo sapiens].
          Length = 409

 Score =  709 bits (1831), Expect = 0.0
 Identities = 357/398 (89%), Positives = 369/398 (92%)
 Frame = +2

Query: 212  SLPEGTMNWHFPFFLVATVTLPSVCSQFNPLSLEELGSDTGIQVFNQIVKSRPHDNIVIS 391
            SL EGTMNWH P FL+A+VTLPS+CS FNPLSLEELGS+TGIQVFNQIVKSRPHDNIVIS
Sbjct: 7    SLVEGTMNWHLPLFLLASVTLPSICSHFNPLSLEELGSNTGIQVFNQIVKSRPHDNIVIS 66

Query: 392  PHGIASVLGMLQLGADGRTKKQLTTVMRYGVNGVGKVLKKINKAIVSKKNKDIVTVANAV 571
            PHGIASVLGMLQLGADGRTKKQL  VMRYGVNGVGK+LKKINKAIVSKKNKDIVTVANAV
Sbjct: 67   PHGIASVLGMLQLGADGRTKKQLAMVMRYGVNGVGKILKKINKAIVSKKNKDIVTVANAV 126

Query: 572  FVKNGFKMEVPFVTRNKDVFQCEVRNADFEDPASACDSINLWVRNETRGMIXXXXXXXXX 751
            FVKN  ++EVPFVTRNKDVFQCEVRN +FEDPASACDSIN WV+NETR MI         
Sbjct: 127  FVKNASEIEVPFVTRNKDVFQCEVRNVNFEDPASACDSINAWVKNETRDMIDNLLSPDLI 186

Query: 752  XXXXTRLVLVNAVYFKGLWKSRFQPENTKKRTFVAADGKSYQVPMLAQLSVFRCGSTSTP 931
                TRLVLVNAVYFKGLWKSRFQPENTKKRTFVAADGKSYQVPMLAQLSVFRCGSTS P
Sbjct: 187  DGVLTRLVLVNAVYFKGLWKSRFQPENTKKRTFVAADGKSYQVPMLAQLSVFRCGSTSAP 246

Query: 932  SDLWYNFIELPYHGESISMLIALPTESSTPLSAIIPHISTKTIDSWMSTMVPKRVQVILP 1111
            +DLWYNFIELPYHGESISMLIALPTESSTPLSAIIPHISTKTIDSWMS MVPKRVQVILP
Sbjct: 247  NDLWYNFIELPYHGESISMLIALPTESSTPLSAIIPHISTKTIDSWMSIMVPKRVQVILP 306

Query: 1112 KFTAVAQTDLKEPLKVLGVTEMFDPSKANFAKITRSENLPVSHILQKAKIEVSEDGTKAS 1291
            KFTAVAQTDLKEPLKVLG+T+MFD SKANFAKITRSENL VSHILQKAKIEVSEDGTKAS
Sbjct: 307  KFTAVAQTDLKEPLKVLGITDMFDSSKANFAKITRSENLHVSHILQKAKIEVSEDGTKAS 366

Query: 1292 AATTAILIARSSPPWFIVDRPFLFFIRHNPTSAVLFMG 1405
            AATTAILIARSSPPWFIVDRPFLFFIRHNPT AVLFMG
Sbjct: 367  AATTAILIARSSPPWFIVDRPFLFFIRHNPTGAVLFMG 404


>ref|NP_001130000.1| glia-derived nexin isoform b precursor [Homo sapiens].
          Length = 397

 Score =  701 bits (1809), Expect = 0.0
 Identities = 352/392 (89%), Positives = 364/392 (92%)
 Frame = +2

Query: 230  MNWHFPFFLVATVTLPSVCSQFNPLSLEELGSDTGIQVFNQIVKSRPHDNIVISPHGIAS 409
            MNWH P FL+A+VTLPS+CS FNPLSLEELGS+TGIQVFNQIVKSRPHDNIVISPHGIAS
Sbjct: 1    MNWHLPLFLLASVTLPSICSHFNPLSLEELGSNTGIQVFNQIVKSRPHDNIVISPHGIAS 60

Query: 410  VLGMLQLGADGRTKKQLTTVMRYGVNGVGKVLKKINKAIVSKKNKDIVTVANAVFVKNGF 589
            VLGMLQLGADGRTKKQL  VMRYGVNGVGK+LKKINKAIVSKKNKDIVTVANAVFVKN  
Sbjct: 61   VLGMLQLGADGRTKKQLAMVMRYGVNGVGKILKKINKAIVSKKNKDIVTVANAVFVKNAS 120

Query: 590  KMEVPFVTRNKDVFQCEVRNADFEDPASACDSINLWVRNETRGMIXXXXXXXXXXXXXTR 769
            ++EVPFVTRNKDVFQCEVRN +FEDPASACDSIN WV+NETR MI             TR
Sbjct: 121  EIEVPFVTRNKDVFQCEVRNVNFEDPASACDSINAWVKNETRDMIDNLLSPDLIDGVLTR 180

Query: 770  LVLVNAVYFKGLWKSRFQPENTKKRTFVAADGKSYQVPMLAQLSVFRCGSTSTPSDLWYN 949
            LVLVNAVYFKGLWKSRFQPENTKKRTFVAADGKSYQVPMLAQLSVFRCGSTS P+DLWYN
Sbjct: 181  LVLVNAVYFKGLWKSRFQPENTKKRTFVAADGKSYQVPMLAQLSVFRCGSTSAPNDLWYN 240

Query: 950  FIELPYHGESISMLIALPTESSTPLSAIIPHISTKTIDSWMSTMVPKRVQVILPKFTAVA 1129
            FIELPYHGESISMLIALPTESSTPLSAIIPHISTKTIDSWMS MVPKRVQVILPKFTAVA
Sbjct: 241  FIELPYHGESISMLIALPTESSTPLSAIIPHISTKTIDSWMSIMVPKRVQVILPKFTAVA 300

Query: 1130 QTDLKEPLKVLGVTEMFDPSKANFAKITRSENLPVSHILQKAKIEVSEDGTKASAATTAI 1309
            QTDLKEPLKVLG+T+MFD SKANFAKITRSENL VSHILQKAKIEVSEDGTKASAATTAI
Sbjct: 301  QTDLKEPLKVLGITDMFDSSKANFAKITRSENLHVSHILQKAKIEVSEDGTKASAATTAI 360

Query: 1310 LIARSSPPWFIVDRPFLFFIRHNPTSAVLFMG 1405
            LIARSSPPWFIVDRPFLFFIRHNPT AVLFMG
Sbjct: 361  LIARSSPPWFIVDRPFLFFIRHNPTGAVLFMG 392


>ref|NP_006207.1| glia-derived nexin isoform a precursor [Homo sapiens].
          Length = 398

 Score =  694 bits (1791), Expect = 0.0
 Identities = 351/393 (89%), Positives = 363/393 (92%), Gaps = 1/393 (0%)
 Frame = +2

Query: 230  MNWHFPFFLVATVTLPSVCSQFNPLSLEELGSDTGIQVFNQIVKSRPHDNIVISPHGIAS 409
            MNWH P FL+A+VTLPS+CS FNPLSLEELGS+TGIQVFNQIVKSRPHDNIVISPHGIAS
Sbjct: 1    MNWHLPLFLLASVTLPSICSHFNPLSLEELGSNTGIQVFNQIVKSRPHDNIVISPHGIAS 60

Query: 410  VLGMLQLGADGRTKKQLTTVMRYGVNGVGKVLKKINKAIVSKKNKDIVTVANAVFVKNGF 589
            VLGMLQLGADGRTKKQL  VMRYGVNGVGK+LKKINKAIVSKKNKDIVTVANAVFVKN  
Sbjct: 61   VLGMLQLGADGRTKKQLAMVMRYGVNGVGKILKKINKAIVSKKNKDIVTVANAVFVKNAS 120

Query: 590  KMEVPFVTRNKDVFQCEVRNADFEDPASACDSINLWVRNETRGMIXXXXXXXXXXXXXTR 769
            ++EVPFVTRNKDVFQCEVRN +FEDPASACDSIN WV+NETR MI             TR
Sbjct: 121  EIEVPFVTRNKDVFQCEVRNVNFEDPASACDSINAWVKNETRDMIDNLLSPDLIDGVLTR 180

Query: 770  LVLVNAVYFKGLWKSRFQPENTKKRTFVAADGKSYQVPMLAQLSVFRCGSTSTPSDLWYN 949
            LVLVNAVYFKGLWKSRFQPENTKKRTFVAADGKSYQVPMLAQLSVFRCGSTS P+DLWYN
Sbjct: 181  LVLVNAVYFKGLWKSRFQPENTKKRTFVAADGKSYQVPMLAQLSVFRCGSTSAPNDLWYN 240

Query: 950  FIELPYHGESISMLIALPTESSTPLSAIIPHISTKTIDSWMSTMVPKRVQVILPKFTAVA 1129
            FIELPYHGESISMLIALPTESSTPLSAIIPHISTKTIDSWMS MVPKRVQVILPKFTAVA
Sbjct: 241  FIELPYHGESISMLIALPTESSTPLSAIIPHISTKTIDSWMSIMVPKRVQVILPKFTAVA 300

Query: 1130 QTDLKEPLKVLGVTEMFDPSKANFAKITR-SENLPVSHILQKAKIEVSEDGTKASAATTA 1306
            QTDLKEPLKVLG+T+MFD SKANFAKIT  SENL VSHILQKAKIEVSEDGTKASAATTA
Sbjct: 301  QTDLKEPLKVLGITDMFDSSKANFAKITTGSENLHVSHILQKAKIEVSEDGTKASAATTA 360

Query: 1307 ILIARSSPPWFIVDRPFLFFIRHNPTSAVLFMG 1405
            ILIARSSPPWFIVDRPFLFFIRHNPT AVLFMG
Sbjct: 361  ILIARSSPPWFIVDRPFLFFIRHNPTGAVLFMG 393


>ref|NP_000593.1| plasminogen activator inhibitor 1 isoform 1 precursor [Homo sapiens].
          Length = 402

 Score =  280 bits (717), Expect = 2e-75
 Identities = 149/371 (40%), Positives = 221/371 (59%), Gaps = 2/371 (0%)
 Frame = +2

Query: 299  PLSLEELGSDTGIQVFNQIVKSRPHDNIVISPHGIASVLGMLQLGADGRTKKQLTTVMRY 478
            P  +  L SD G++VF Q+ ++    N+V SP+G+ASVL MLQL   G T++Q+   M +
Sbjct: 28   PSYVAHLASDFGVRVFQQVAQASKDRNVVFSPYGVASVLAMLQLTTGGETQQQIQAAMGF 87

Query: 479  GVN--GVGKVLKKINKAIVSKKNKDIVTVANAVFVKNGFKMEVPFVTRNKDVFQCEVRNA 652
             ++  G+   L+ + K ++   NKD ++  +A+FV+   K+   F+     +F+  V+  
Sbjct: 88   KIDDKGMAPALRHLYKELMGPWNKDEISTTDAIFVQRDLKLVQGFMPHFFRLFRSTVKQV 147

Query: 653  DFEDPASACDSINLWVRNETRGMIXXXXXXXXXXXXXTRLVLVNAVYFKGLWKSRFQPEN 832
            DF +   A   IN WV+  T+GMI             TRLVLVNA+YF G WK+ F   +
Sbjct: 148  DFSEVERARFIINDWVKTHTKGMISNLLGKGAVDQL-TRLVLVNALYFNGQWKTPFPDSS 206

Query: 833  TKKRTFVAADGKSYQVPMLAQLSVFRCGSTSTPSDLWYNFIELPYHGESISMLIALPTES 1012
            T +R F  +DG +  VPM+AQ + F     +TP   +Y+ +ELPYHG+++SM IA P E 
Sbjct: 207  THRRLFHKSDGSTVSVPMMAQTNKFNYTEFTTPDGHYYDILELPYHGDTLSMFIAAPYEK 266

Query: 1013 STPLSAIIPHISTKTIDSWMSTMVPKRVQVILPKFTAVAQTDLKEPLKVLGVTEMFDPSK 1192
              PLSA+   +S + I  W   M      ++LPKF+   + DL++PL+ LG+T+MF   +
Sbjct: 267  EVPLSALTNILSAQLISHWKGNMTRLPRLLVLPKFSLETEVDLRKPLENLGMTDMFRQFQ 326

Query: 1193 ANFAKITRSENLPVSHILQKAKIEVSEDGTKASAATTAILIARSSPPWFIVDRPFLFFIR 1372
            A+F  ++  E L V+  LQK KIEV+E GT AS++T  I+ AR +P   I+DRPFLF +R
Sbjct: 327  ADFTSLSDQEPLHVAQALQKVKIEVNESGTVASSSTAVIVSARMAPEEIIMDRPFLFVVR 386

Query: 1373 HNPTSAVLFMG 1405
            HNPT  VLFMG
Sbjct: 387  HNPTGTVLFMG 397


>ref|NP_001158885.1| plasminogen activator inhibitor 1 isoform 2 precursor [Homo sapiens].
          Length = 387

 Score =  265 bits (677), Expect = 8e-71
 Identities = 141/345 (40%), Positives = 207/345 (60%), Gaps = 2/345 (0%)
 Frame = +2

Query: 377  NIVISPHGIASVLGMLQLGADGRTKKQLTTVMRYGVN--GVGKVLKKINKAIVSKKNKDI 550
            N+V SP+G+ASVL MLQL   G T++Q+   M + ++  G+   L+ + K ++   NKD 
Sbjct: 39   NVVFSPYGVASVLAMLQLTTGGETQQQIQAAMGFKIDDKGMAPALRHLYKELMGPWNKDE 98

Query: 551  VTVANAVFVKNGFKMEVPFVTRNKDVFQCEVRNADFEDPASACDSINLWVRNETRGMIXX 730
            ++  +A+FV+   K+   F+     +F+  V+  DF +   A   IN WV+  T+GMI  
Sbjct: 99   ISTTDAIFVQRDLKLVQGFMPHFFRLFRSTVKQVDFSEVERARFIINDWVKTHTKGMISN 158

Query: 731  XXXXXXXXXXXTRLVLVNAVYFKGLWKSRFQPENTKKRTFVAADGKSYQVPMLAQLSVFR 910
                       TRLVLVNA+YF G WK+ F   +T +R F  +DG +  VPM+AQ + F 
Sbjct: 159  LLGKGAVDQL-TRLVLVNALYFNGQWKTPFPDSSTHRRLFHKSDGSTVSVPMMAQTNKFN 217

Query: 911  CGSTSTPSDLWYNFIELPYHGESISMLIALPTESSTPLSAIIPHISTKTIDSWMSTMVPK 1090
                +TP   +Y+ +ELPYHG+++SM IA P E   PLSA+   +S + I  W   M   
Sbjct: 218  YTEFTTPDGHYYDILELPYHGDTLSMFIAAPYEKEVPLSALTNILSAQLISHWKGNMTRL 277

Query: 1091 RVQVILPKFTAVAQTDLKEPLKVLGVTEMFDPSKANFAKITRSENLPVSHILQKAKIEVS 1270
               ++LPKF+   + DL++PL+ LG+T+MF   +A+F  ++  E L V+  LQK KIEV+
Sbjct: 278  PRLLVLPKFSLETEVDLRKPLENLGMTDMFRQFQADFTSLSDQEPLHVAQALQKVKIEVN 337

Query: 1271 EDGTKASAATTAILIARSSPPWFIVDRPFLFFIRHNPTSAVLFMG 1405
            E GT AS++T  I+ AR +P   I+DRPFLF +RHNPT  VLFMG
Sbjct: 338  ESGTVASSSTAVIVSARMAPEEIIMDRPFLFVVRHNPTGTVLFMG 382


>ref|NP_001116224.1| neuroserpin precursor [Homo sapiens].
          Length = 410

 Score =  228 bits (581), Expect = 1e-59
 Identities = 127/373 (34%), Positives = 213/373 (57%), Gaps = 8/373 (2%)
 Frame = +2

Query: 311  EELGSDTGIQVFNQIVKSRPHDNIVISPHGIASVLGMLQLGADGRTKKQLTTVMRYGVNG 490
            EE  +D  + ++N++  +   +NI+ SP  IA  +GM++LGA G T+K++   M Y    
Sbjct: 23   EEAIADLSVNMYNRLRATGEDENILFSPLSIALAMGMMELGAQGSTQKEIRHSMGYDSLK 82

Query: 491  VGK---VLKKINKAIVSKKNKDIVTVANAVFVKNGFKMEVPFVTRNKDVFQCEVRNADFE 661
             G+    LK+ +  + +K+++ ++ +AN++FV+NGF +   F+   K  F   V + DF 
Sbjct: 83   NGEEFSFLKEFSNMVTAKESQYVMKIANSLFVQNGFHVNEEFLQMMKKYFNAAVNHVDFS 142

Query: 662  DPASACDSINLWVRNETRGMIXXXXXXXXXXXXXTRLVLVNAVYFKGLWKSRFQPENTKK 841
               +  + IN WV N T  ++             T L L+NAVYFKG WKS+F+PENT+ 
Sbjct: 143  QNVAVANYINKWVENNTNNLVKDLVSPRDFDAA-TYLALINAVYFKGNWKSQFRPENTRT 201

Query: 842  RTFVAADGKSYQVPMLAQLSVFRCGSTSTPSDL---WYNFIELPYHGESISMLIALPTES 1012
             +F   D    Q+PM+ Q   F  G  S  S+     Y  +E+PY G+ ISM++ L +  
Sbjct: 202  FSFTKDDESEVQIPMMYQQGEFYYGEFSDGSNEAGGIYQVLEIPYEGDEISMMLVL-SRQ 260

Query: 1013 STPLSAIIPHISTKTIDSWMSTMVPKRVQVILPKFTAVAQTDLKEPLKVLGVTEMFDPSK 1192
              PL+ + P +  + ++ W +++  ++V+V LP+FT   + DLK+ LK LG+TE+F    
Sbjct: 261  EVPLATLEPLVKAQLVEEWANSVKKQKVEVYLPRFTVEQEIDLKDVLKALGITEIF-IKD 319

Query: 1193 ANFAKITRSENLPVSHILQKAKIEVSEDGTKASAATTAILIARSSP--PWFIVDRPFLFF 1366
            AN   ++ ++ + +S  + K+ +EV+E+G++A+A +  I I+R +   P  IVD PF F 
Sbjct: 320  ANLTGLSDNKEIFLSKAIHKSFLEVNEEGSEAAAVSGMIAISRMAVLYPQVIVDHPFFFL 379

Query: 1367 IRHNPTSAVLFMG 1405
            IR+  T  +LFMG
Sbjct: 380  IRNRRTGTILFMG 392


>ref|NP_005016.1| neuroserpin precursor [Homo sapiens].
          Length = 410

 Score =  228 bits (581), Expect = 1e-59
 Identities = 127/373 (34%), Positives = 213/373 (57%), Gaps = 8/373 (2%)
 Frame = +2

Query: 311  EELGSDTGIQVFNQIVKSRPHDNIVISPHGIASVLGMLQLGADGRTKKQLTTVMRYGVNG 490
            EE  +D  + ++N++  +   +NI+ SP  IA  +GM++LGA G T+K++   M Y    
Sbjct: 23   EEAIADLSVNMYNRLRATGEDENILFSPLSIALAMGMMELGAQGSTQKEIRHSMGYDSLK 82

Query: 491  VGK---VLKKINKAIVSKKNKDIVTVANAVFVKNGFKMEVPFVTRNKDVFQCEVRNADFE 661
             G+    LK+ +  + +K+++ ++ +AN++FV+NGF +   F+   K  F   V + DF 
Sbjct: 83   NGEEFSFLKEFSNMVTAKESQYVMKIANSLFVQNGFHVNEEFLQMMKKYFNAAVNHVDFS 142

Query: 662  DPASACDSINLWVRNETRGMIXXXXXXXXXXXXXTRLVLVNAVYFKGLWKSRFQPENTKK 841
               +  + IN WV N T  ++             T L L+NAVYFKG WKS+F+PENT+ 
Sbjct: 143  QNVAVANYINKWVENNTNNLVKDLVSPRDFDAA-TYLALINAVYFKGNWKSQFRPENTRT 201

Query: 842  RTFVAADGKSYQVPMLAQLSVFRCGSTSTPSDL---WYNFIELPYHGESISMLIALPTES 1012
             +F   D    Q+PM+ Q   F  G  S  S+     Y  +E+PY G+ ISM++ L +  
Sbjct: 202  FSFTKDDESEVQIPMMYQQGEFYYGEFSDGSNEAGGIYQVLEIPYEGDEISMMLVL-SRQ 260

Query: 1013 STPLSAIIPHISTKTIDSWMSTMVPKRVQVILPKFTAVAQTDLKEPLKVLGVTEMFDPSK 1192
              PL+ + P +  + ++ W +++  ++V+V LP+FT   + DLK+ LK LG+TE+F    
Sbjct: 261  EVPLATLEPLVKAQLVEEWANSVKKQKVEVYLPRFTVEQEIDLKDVLKALGITEIF-IKD 319

Query: 1193 ANFAKITRSENLPVSHILQKAKIEVSEDGTKASAATTAILIARSSP--PWFIVDRPFLFF 1366
            AN   ++ ++ + +S  + K+ +EV+E+G++A+A +  I I+R +   P  IVD PF F 
Sbjct: 320  ANLTGLSDNKEIFLSKAIHKSFLEVNEEGSEAAAVSGMIAISRMAVLYPQVIVDHPFFFL 379

Query: 1367 IRHNPTSAVLFMG 1405
            IR+  T  +LFMG
Sbjct: 380  IRNRRTGTILFMG 392


>ref|NP_006208.1| serpin I2 precursor [Homo sapiens].
          Length = 405

 Score =  207 bits (528), Expect = 1e-53
 Identities = 122/349 (34%), Positives = 194/349 (55%), Gaps = 5/349 (1%)
 Frame = +2

Query: 374  DNIVISPHGIASVLGMLQLGADGRTKKQLTTVMRYGVNGVGK---VLKKINKAIVSKKNK 544
            DNI+ SP GI  VL M+QLGA G+ ++Q+   ++      G+   VLK    AI  KK +
Sbjct: 43   DNIIFSPLGITLVLEMVQLGAKGKAQQQIRQTLKQQETSAGEEFFVLKSFFSAISEKKQE 102

Query: 545  DIVTVANAVFVKNGFKMEVPFVTRNKDVFQCEVRNADFEDPASACDSINLWVRNETRGMI 724
                +ANA++++ GF ++  ++  NK+ FQ  ++  DF+D  +  + I+ WV  +T G I
Sbjct: 103  FTFNLANALYLQEGFTVKEQYLHGNKEFFQSAIKLVDFQDAKACAEMISTWVERKTDGKI 162

Query: 725  XXXXXXXXXXXXXTRLVLVNAVYFKGLWKSRFQPENTKKRTFVAADGKSYQVPMLAQLSV 904
                         TRLVLVNA+YFKG WK +F+ E+T+   F   +G + ++PM+  L  
Sbjct: 163  -KDMFSGEEFGPLTRLVLVNAIYFKGDWKQKFRKEDTQLINFTKKNGSTVKIPMMKALLR 221

Query: 905  FRCGSTSTPSDLWYNFIELPYHGESISMLIALPTESSTPLSAIIPHISTKTIDSWMSTMV 1084
             + G  S  S L Y  +EL Y G+  S++I LP E    +  +   I+ + I  W+S M 
Sbjct: 222  TKYGYFS-ESSLNYQVLELSYKGDEFSLIIILPAE-GMDIEEVEKLITAQQILKWLSEMQ 279

Query: 1085 PKRVQVILPKFTAVAQTDLKEPLKVLGVTEMFDPSKANFAKITRSENLPVSHILQKAKIE 1264
             + V++ LP+F    + D K+ L  L +TE+F     + + IT S  + VS + QK   E
Sbjct: 280  EEEVEISLPRFKVEQKVDFKDVLYSLNITEIFS-GGCDLSGITDSSEVYVSQVTQKVFFE 338

Query: 1265 VSEDGTKASAATTAIL--IARSSPPWFIVDRPFLFFIRHNPTSAVLFMG 1405
            ++EDG++A+ +T   +  I   +   FI + PFLF ++HNPT ++LFMG
Sbjct: 339  INEDGSEAATSTGIHIPVIMSLAQSQFIANHPFLFIMKHNPTESILFMG 387


>ref|NP_001094790.1| serpin E3 precursor [Homo sapiens].
          Length = 424

 Score =  191 bits (484), Expect = 2e-48
 Identities = 126/394 (31%), Positives = 190/394 (48%), Gaps = 9/394 (2%)
 Frame = +2

Query: 245  PFFLVATVTLPSVCSQFNPLSLEE---LGSDTGIQVFNQIVKSRPHDNIVISPHGIASVL 415
            P FL+      S C + N    E    L ++  + ++  +   R   N VISP G++  L
Sbjct: 2    PPFLITLFLFHSCCLRANGHLREGMTLLKTEFALHLYQSVAACRNETNFVISPAGVSLPL 61

Query: 416  GMLQLGADGRTKKQLTTVMRYGVNG--VGKVLKKINKAIVSKKNKDIVTVANAVFVKNGF 589
             +LQ GA+G T +QL   + Y V+   V   L  +   + +      + +A ++FV+ G 
Sbjct: 62   EILQFGAEGSTGQQLADALGYTVHDKRVKDFLHAVYATLPTSSQGTEMELACSLFVQVGT 121

Query: 590  KMEVPFVTRNKDVFQCEVRNADFEDPASACDSINLWVRNETRGMIXXXXXXXXXXXXXT- 766
             +   FV          +  AD  +P S     +     ET G               + 
Sbjct: 122  PLSPCFVEHVSWWANSSLEPADLSEPNSTAIQTSEGASRETAGGGPSEGPGGWPWEQVSA 181

Query: 767  ---RLVLVNAVYFKGLWKSRFQPENTKKRTFVAADGKSYQVPMLAQLSVFRCGSTSTPSD 937
               +LVLV+ + F+G W+ RF   +T+   F  A G   QVPM+ Q +    G     + 
Sbjct: 182  AFAQLVLVSTMSFQGTWRKRFSSTDTQILPFTCAYGLVLQVPMMHQTTEVNYGQFQDTAG 241

Query: 938  LWYNFIELPYHGESISMLIALPTESSTPLSAIIPHISTKTIDSWMSTMVPKRVQVILPKF 1117
                 +ELPY G ++S+ + LP +  TPLS I PH++  TI  W +++   R+ V LP+F
Sbjct: 242  HQVGVLELPYLGSAVSLFLVLPRDKDTPLSHIEPHLTASTIHLWTTSLRRARMDVFLPRF 301

Query: 1118 TAVAQTDLKEPLKVLGVTEMFDPSKANFAKITRSENLPVSHILQKAKIEVSEDGTKASAA 1297
                Q +LK  L   GVT++FDP KAN   I+  +   VS  + KAKIEV E+GTKAS A
Sbjct: 302  RIQNQFNLKSILNSWGVTDLFDPLKANLKGISGQDGFYVSEAIHKAKIEVLEEGTKASGA 361

Query: 1298 TTAILIARSSPPWFIVDRPFLFFIRHNPTSAVLF 1399
            T  +L+ RS  P F  DRPF++F+R   T   +F
Sbjct: 362  TALLLLKRSRIPIFKADRPFIYFLREPNTGITVF 395


>ref|NP_000479.1| antithrombin-III precursor [Homo sapiens].
          Length = 464

 Score =  171 bits (433), Expect = 2e-42
 Identities = 113/358 (31%), Positives = 184/358 (51%), Gaps = 13/358 (3%)
 Frame = +2

Query: 371  HDNIVISPHGIASVLGMLQLGADGRTKKQLTTVMRYGV------NGVGKVLKKINKAIVS 532
            +DNI +SP  I++   M +LGA   T +QL  V ++        + +     K+N  +  
Sbjct: 105  NDNIFLSPLSISTAFAMTKLGACNDTLQQLMEVFKFDTISEKTSDQIHFFFAKLNCRLYR 164

Query: 533  KKNKDIVTV-ANAVFVKNGFKMEVPFVTRNKDVFQCEVRNADFEDPASACDS-INLWVRN 706
            K NK    V AN +F          +   ++ V+  +++  DF++ A    + IN WV N
Sbjct: 165  KANKSSKLVSANRLFGDKSLTFNETYQDISELVYGAKLQPLDFKENAEQSRAAINKWVSN 224

Query: 707  ETRGMIXXXXXXXXXXXXXTRLVLVNAVYFKGLWKSRFQPENTKKRTFVAADGKSYQVPM 886
            +T G I             T LVLVN +YFKGLWKS+F PENT+K  F  ADG+S    M
Sbjct: 225  KTEGRITDVIPSEAINEL-TVLVLVNTIYFKGLWKSKFSPENTRKELFYKADGESCSASM 283

Query: 887  LAQLSVFRCGSTSTPSDLWYNFIELPYHGESISMLIALPTESSTPLSAIIPHISTKTIDS 1066
            + Q   FR    +  + +    +ELP+ G+ I+M++ LP    + L+ +   ++ + +  
Sbjct: 284  MYQEGKFRYRRVAEGTQV----LELPFKGDDITMVLILPKPEKS-LAKVEKELTPEVLQE 338

Query: 1067 WMSTMVPKRVQVILPKFTAVAQTDLKEPLKVLGVTEMFDPSKANFAKITRS--ENLPVSH 1240
            W+  +    + V +P+F       LKE L+ +G+ ++F P K+    I     ++L VS 
Sbjct: 339  WLDELEEMMLVVHMPRFRIEDGFSLKEQLQDMGLVDLFSPEKSKLPGIVAEGRDDLYVSD 398

Query: 1241 ILQKAKIEVSEDGTKASAATTAILIARSSPP---WFIVDRPFLFFIRHNPTSAVLFMG 1405
               KA +EV+E+G++A+A+T  ++  RS  P    F  +RPFL FIR  P + ++FMG
Sbjct: 399  AFHKAFLEVNEEGSEAAASTAVVIAGRSLNPNRVTFKANRPFLVFIREVPLNTIIFMG 456


  Database: RefSeq49_HP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,297,164
  Number of sequences in database:  32,964
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 50,390,292
Number of extensions: 1319039
Number of successful extensions: 4253
Number of sequences better than 1.0e-05: 59
Number of HSP's gapped: 4079
Number of HSP's successfully gapped: 60
Length of query: 468
Length of database: 18,297,164
Length adjustment: 106
Effective length of query: 362
Effective length of database: 14,802,980
Effective search space: 5358678760
Effective search space used: 5358678760
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

Search to RefSeqMP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-003048
         (1406 letters)

Database: RefSeq49_MP.fasta 
           30,036 sequences; 15,617,559 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_033281.1| glia-derived nexin precursor [Mus musculus].         670   0.0  
Alignment   gi|NP_032897.2| plasminogen activator inhibitor 1 precursor [Mu...   265   8e-71
Alignment   gi|NP_033276.1| neuroserpin precursor [Mus musculus].                226   3e-59
Alignment   gi|NP_080736.2| serpin I2 precursor [Mus musculus].                  202   5e-52
Alignment   gi|NP_958751.2| serine (or cysteine) proteinase inhibitor, clad...   174   2e-43
Alignment   gi|NP_079705.2| leukocyte elastase inhibitor A [Mus musculus].       173   3e-43
Alignment   gi|NP_543120.1| antithrombin-III precursor [Mus musculus].           172   6e-43
Alignment   gi|NP_035582.1| serine (or cysteine) proteinase inhibitor, clad...   171   1e-42
Alignment   gi|NP_941373.1| serine (or cysteine) proteinase inhibitor, clad...   169   4e-42
Alignment   gi|NP_033152.3| serine peptidase inhibitor, clade B, member 3A ...   167   2e-41

>ref|NP_033281.1| glia-derived nexin precursor [Mus musculus].
          Length = 397

 Score =  670 bits (1729), Expect = 0.0
 Identities = 331/392 (84%), Positives = 360/392 (91%)
 Frame = +2

Query: 230  MNWHFPFFLVATVTLPSVCSQFNPLSLEELGSDTGIQVFNQIVKSRPHDNIVISPHGIAS 409
            MNWHFPFF++ TVTL SV SQFN LSLEELGS+TGIQVFNQI+KSRPH+N+V+SPHGIAS
Sbjct: 1    MNWHFPFFILTTVTLYSVHSQFNSLSLEELGSNTGIQVFNQIIKSRPHENVVVSPHGIAS 60

Query: 410  VLGMLQLGADGRTKKQLTTVMRYGVNGVGKVLKKINKAIVSKKNKDIVTVANAVFVKNGF 589
            +LGMLQLGADG+TKKQL+TVMRY VNGVGKVLKKINKAIVSKKNKDIVTVANAVF++NGF
Sbjct: 61   ILGMLQLGADGKTKKQLSTVMRYNVNGVGKVLKKINKAIVSKKNKDIVTVANAVFLRNGF 120

Query: 590  KMEVPFVTRNKDVFQCEVRNADFEDPASACDSINLWVRNETRGMIXXXXXXXXXXXXXTR 769
            KMEVPF  RNKDVFQCEV+N +F+DPASA +SIN WV+NETRGMI             TR
Sbjct: 121  KMEVPFAVRNKDVFQCEVQNVNFQDPASASESINFWVKNETRGMIDNLLSPNLIDGALTR 180

Query: 770  LVLVNAVYFKGLWKSRFQPENTKKRTFVAADGKSYQVPMLAQLSVFRCGSTSTPSDLWYN 949
            LVLVNAVYFKGLWKSRFQPE+TKKRTFVA DGKSYQVPMLAQLSVFR GST TP+ LWYN
Sbjct: 181  LVLVNAVYFKGLWKSRFQPESTKKRTFVAGDGKSYQVPMLAQLSVFRSGSTRTPNGLWYN 240

Query: 950  FIELPYHGESISMLIALPTESSTPLSAIIPHISTKTIDSWMSTMVPKRVQVILPKFTAVA 1129
            FIELPYHGESISMLIALPTESSTPLSAIIPHI+TKTIDSWM+TMVPKR+Q++LPKFTAVA
Sbjct: 241  FIELPYHGESISMLIALPTESSTPLSAIIPHITTKTIDSWMNTMVPKRMQLVLPKFTAVA 300

Query: 1130 QTDLKEPLKVLGVTEMFDPSKANFAKITRSENLPVSHILQKAKIEVSEDGTKASAATTAI 1309
            QTDLKEPLK LG+TEMF+PSKANF KITRSE+L VSHILQKAKIEVSEDGTKASAATTAI
Sbjct: 301  QTDLKEPLKALGITEMFEPSKANFTKITRSESLHVSHILQKAKIEVSEDGTKASAATTAI 360

Query: 1310 LIARSSPPWFIVDRPFLFFIRHNPTSAVLFMG 1405
            LIARSSPPWFIVDRPFLF IRHNPT A+LF+G
Sbjct: 361  LIARSSPPWFIVDRPFLFSIRHNPTGAILFLG 392


>ref|NP_032897.2| plasminogen activator inhibitor 1 precursor [Mus musculus].
          Length = 402

 Score =  265 bits (676), Expect = 8e-71
 Identities = 140/363 (38%), Positives = 215/363 (59%), Gaps = 2/363 (0%)
 Frame = +2

Query: 323  SDTGIQVFNQIVKSRPHDNIVISPHGIASVLGMLQLGADGRTKKQLTTVMRYGVN--GVG 496
            +D G++VF Q+V++    N+V SP+G++SVL MLQ+   G+T++Q+   M + VN  G  
Sbjct: 36   TDFGVKVFQQVVQASKDRNVVFSPYGVSSVLAMLQMTTAGKTRRQIQDAMGFKVNEKGTA 95

Query: 497  KVLKKINKAIVSKKNKDIVTVANAVFVKNGFKMEVPFVTRNKDVFQCEVRNADFEDPASA 676
              L++++K ++   NK+ ++ A+A+FV+   ++   F+     +FQ  V+  DF +   A
Sbjct: 96   HALRQLSKELMGPWNKNEISTADAIFVQRDLELVQGFMPHFFKLFQTMVKQVDFSEVERA 155

Query: 677  CDSINLWVRNETRGMIXXXXXXXXXXXXXTRLVLVNAVYFKGLWKSRFQPENTKKRTFVA 856
               IN WV   T+GMI             TRLVLVNA+YF G WK+ F   +T +R F  
Sbjct: 156  RFIINDWVERHTKGMISDLLAKGAVDEL-TRLVLVNALYFSGQWKTPFLEASTHQRLFHK 214

Query: 857  ADGKSYQVPMLAQLSVFRCGSTSTPSDLWYNFIELPYHGESISMLIALPTESSTPLSAII 1036
            +DG +  VPM+AQ + F     +TP  L Y+ +ELPY G+++SM IA P E    LSA+ 
Sbjct: 215  SDGSTVSVPMMAQSNKFNYTEFTTPDGLEYDVVELPYQGDTLSMFIAAPFEKDVHLSALT 274

Query: 1037 PHISTKTIDSWMSTMVPKRVQVILPKFTAVAQTDLKEPLKVLGVTEMFDPSKANFAKITR 1216
              +  + I  W   M      +ILPKF+   + DL+ PL+ LG+ +MF  + A+F  ++ 
Sbjct: 275  NILDAELIRQWKGNMTRLPRLLILPKFSLETEVDLRGPLEKLGMPDMFSATLADFTSLSD 334

Query: 1217 SENLPVSHILQKAKIEVSEDGTKASAATTAILIARSSPPWFIVDRPFLFFIRHNPTSAVL 1396
             E L V+  LQK +IEV+E GT AS++T  ++ AR +P   ++DR FLF +RHNPT  +L
Sbjct: 335  QEQLSVAQALQKVRIEVNESGTVASSSTAFVISARMAPTEMVIDRSFLFVVRHNPTETIL 394

Query: 1397 FMG 1405
            FMG
Sbjct: 395  FMG 397


>ref|NP_033276.1| neuroserpin precursor [Mus musculus].
          Length = 410

 Score =  226 bits (577), Expect = 3e-59
 Identities = 132/373 (35%), Positives = 216/373 (57%), Gaps = 8/373 (2%)
 Frame = +2

Query: 311  EELGSDTGIQVFNQIVKSRPHDNIVISPHGIASVLGMLQLGADGRTKKQLTTVMRY-GVN 487
            +E  ++  + ++N +  +   +NI+ SP  IA  +GM++LGA G T+K++   M Y G+ 
Sbjct: 23   DETITEWSVNMYNHLRGTGEDENILFSPLSIALAMGMMELGAQGSTRKEIRHSMGYEGLK 82

Query: 488  GVGKV--LKKINKAIVSKKNKDIVTVANAVFVKNGFKMEVPFVTRNKDVFQCEVRNADFE 661
            G  +   L+  +    +++N+ ++ +AN++FV+NGF +   F+   K  F  EV + DF 
Sbjct: 83   GGEEFSFLRDFSNMASAEENQYVMKLANSLFVQNGFHVNEEFLQMLKMYFNAEVNHVDFS 142

Query: 662  DPASACDSINLWVRNETRGMIXXXXXXXXXXXXXTRLVLVNAVYFKGLWKSRFQPENTKK 841
               +  +SIN WV N T  ++             T L L+NAVYFKG WKS+F+PENT+ 
Sbjct: 143  QNVAVANSINKWVENYTNSLLKDLVSPEDFDGV-TNLALINAVYFKGNWKSQFRPENTRT 201

Query: 842  RTFVAADGKSYQVPMLAQLSVFRCGSTSTPSDL---WYNFIELPYHGESISMLIALPTES 1012
             +F   D    Q+PM+ Q   F  G  S  S+     Y  +E+PY G+ ISM++AL +  
Sbjct: 202  FSFTKDDESEVQIPMMYQQGEFYYGEFSDGSNEAGGIYQVLEIPYEGDEISMMLAL-SRQ 260

Query: 1013 STPLSAIIPHISTKTIDSWMSTMVPKRVQVILPKFTAVAQTDLKEPLKVLGVTEMFDPSK 1192
              PL+ + P +  + I+ W +++  ++V+V LP+FT   + DLK+ LK LGVTE+F    
Sbjct: 261  EVPLATLEPLLKAQLIEEWANSVKKQKVEVYLPRFTVEQEIDLKDILKALGVTEIF-IKD 319

Query: 1193 ANFAKITRSENLPVSHILQKAKIEVSEDGTKASAATTAILIARSSP--PWFIVDRPFLFF 1366
            AN   ++  + L +S  + K+ IEV+E+G++A+AA+  I I+R +   P  IVD PFL+ 
Sbjct: 320  ANLTAMSDKKELFLSKAVHKSCIEVNEEGSEAAAASGMIAISRMAVLYPQVIVDHPFLYL 379

Query: 1367 IRHNPTSAVLFMG 1405
            IR+  +  +LFMG
Sbjct: 380  IRNRKSGIILFMG 392


>ref|NP_080736.2| serpin I2 precursor [Mus musculus].
          Length = 405

 Score =  202 bits (514), Expect = 5e-52
 Identities = 124/366 (33%), Positives = 202/366 (55%), Gaps = 5/366 (1%)
 Frame = +2

Query: 323  SDTGIQVFNQIVKSRPHDNIVISPHGIASVLGMLQLGADGRTKKQLTTVMRYGVNGVGK- 499
            +D  + ++  I  S  + NI+ SP G   +LGM+QLGA G+ ++Q+   +R      G+ 
Sbjct: 27   ADFAVDLYKAISLSHKN-NIIFSPLGTTMLLGMVQLGAKGKAQQQILKTLRMRGTPAGEE 85

Query: 500  --VLKKINKAIVSKKNKDIVTVANAVFVKNGFKMEVPFVTRNKDVFQCEVRNADFEDPAS 673
              VLK +  AI  KK +    +A+A++++ GF ++  ++  NK+ FQ   +  DF D  +
Sbjct: 86   FSVLKSLFSAISKKKQEFTFNLASALYLQEGFIVKETYLHSNKEFFQSATKLVDFLDAKT 145

Query: 674  ACDSINLWVRNETRGMIXXXXXXXXXXXXXTRLVLVNAVYFKGLWKSRFQPENTKKRTFV 853
            +  +I+ WV ++T G I             TRLVLVNA+YFKG WK +F+ E+T+   F 
Sbjct: 146  SAQAISTWVESKTDGKIKNMFSEEEFGPL-TRLVLVNAIYFKGDWKQKFRKEDTEMTDFT 204

Query: 854  AADGKSYQVPMLAQLSVFRCGSTSTPSDLWYNFIELPYHGESISMLIALPTESSTPLSAI 1033
              DG + +VPM+  L   + G  S  S +    +ELPY  +  S++I LPTE  T +  +
Sbjct: 205  KKDGSTVKVPMMKALLRAQYGYFS-QSSMTCQVLELPYKADEFSLVIILPTE-DTSIEEV 262

Query: 1034 IPHISTKTIDSWMSTMVPKRVQVILPKFTAVAQTDLKEPLKVLGVTEMFDPSKANFAKIT 1213
               ++   +  W S +  + V+V LP+F    + DLKE L  L VTE+F     + + IT
Sbjct: 263  ENQVTAPHVRRWFSELHEEEVEVSLPRFKIEQKLDLKEALYSLNVTEIFS-GGCDLSGIT 321

Query: 1214 RSENLPVSHILQKAKIEVSEDGTKASAATTAIL--IARSSPPWFIVDRPFLFFIRHNPTS 1387
             S  + VS ++QK   E++EDG++A+A+T   +  I   +   F+ + PFLF ++H  T 
Sbjct: 322  DSSEVYVSRVMQKVFFEINEDGSEAAASTGINIPAIMSLTQTQFLANHPFLFILKHIRTE 381

Query: 1388 AVLFMG 1405
            ++LFMG
Sbjct: 382  SILFMG 387


>ref|NP_958751.2| serine (or cysteine) proteinase inhibitor, clade B, member 3C [Mus
            musculus].
          Length = 386

 Score =  174 bits (440), Expect = 2e-43
 Identities = 121/376 (32%), Positives = 191/376 (50%), Gaps = 19/376 (5%)
 Frame = +2

Query: 335  IQVFNQIVKSRPHDNIVISPHGIASVLGMLQLGADGRTKKQLTTVMRYG----------- 481
            ++++ Q+ +S    NI  SP  + + LGML+LGA G T+ Q+  V++             
Sbjct: 13   VEMYRQLRES--DKNIFYSPISMITALGMLKLGAKGNTEIQIEKVLQCNETTEKTTEKSA 70

Query: 482  -VNGVGKVLKKINKAI--VSKKNKDI-VTVANAVFVKNGFKMEVPFVTRNKDVFQCEVRN 649
              +    V ++  K I  ++K N D  +  AN+++   GF +   F+   K+ +   V +
Sbjct: 71   HCDDEDNVHEQFQKLITQLNKSNDDYDLKAANSIYGAKGFPLLQTFLEDIKEYYHANVES 130

Query: 650  ADFEDPASACDS-INLWVRNETRGMIXXXXXXXXXXXXXTRLVLVNAVYFKGLWKSRFQP 826
             DFE  A   +  IN WV+NET G I             T+LVLVNAVYFKG W  +F  
Sbjct: 131  LDFEHAAEESEKKINFWVKNETNGKIKDLFPSGSLSSS-TKLVLVNAVYFKGRWNHKFDE 189

Query: 827  ENTKKRTFVAADGKSYQVPMLAQLSVFRCGSTSTPSDLWYNFIELPYHGESISMLIALPT 1006
             NT +  F      S  VPM+ Q + F     S   D+    +E+PY G+ +SM + LP 
Sbjct: 190  NNTIEEMFWLNKNTSIPVPMMKQRNKFMF---SFLEDVQAQIVEIPYKGKELSMFVLLPM 246

Query: 1007 ESSTPLSAIIPHISTKTIDSWM--STMVPKRVQVILPKFTAVAQTDLKEPLKVLGVTEMF 1180
            E    L  +   ++   +  W     M    + + LP+F    + DL  PL+ +G+   F
Sbjct: 247  EIDG-LKQLEKQLTAAKLLEWTRAENMHLTELYLWLPRFKVEEKYDLPVPLECMGMVNAF 305

Query: 1181 DPSKANFAKITRSENLPVSHILQKAKIEVSEDGTKASAATTAILIAR-SSPPWFIVDRPF 1357
            DP KA+F+ ++ ++ L VS +L K+ +EV+E+GT+A  A+   +I R +    F  D PF
Sbjct: 306  DPQKADFSGMSSTQGLVVSKVLHKSFVEVNEEGTEADPASGEEVILRLAQVADFRCDHPF 365

Query: 1358 LFFIRHNPTSAVLFMG 1405
            LFFI H+ T+++LF G
Sbjct: 366  LFFIIHSKTNSILFFG 381


>ref|NP_079705.2| leukocyte elastase inhibitor A [Mus musculus].
          Length = 379

 Score =  173 bits (439), Expect = 3e-43
 Identities = 122/378 (32%), Positives = 190/378 (50%), Gaps = 12/378 (3%)
 Frame = +2

Query: 308  LEELGSDT---GIQVFNQIVKSRPHDNIVISPHGIASVLGMLQLGADGRTKKQLTTVMRY 478
            +E+L S      +++F  + +S P  NI  SP  I+S L M+ LGA G T  QL+    +
Sbjct: 1    MEQLSSANTLFALELFQTLNESSPTGNIFFSPFSISSALAMVILGAKGSTAAQLSKTFHF 60

Query: 479  -GVNGVGKVLKKINKAIVSKKNKDIVTVANAVFVKNGFKMEVPFVTRNKDVFQCEVRNAD 655
              V  +    + +N  +  +     + +AN ++ +  +     ++   + ++  ++   D
Sbjct: 61   DSVEDIHSRFQSLNAEVSKRGASHTLKLANRLYGEKTYNFLPEYLASTQKMYGADLAPVD 120

Query: 656  FEDPAS-ACDSINLWVRNETRGMIXXXXXXXXXXXXXTRLVLVNAVYFKGLWKSRFQPEN 832
            F   +  A   IN WV+ +T G I             T+LVLVNA+YFKG+W+ +F  E+
Sbjct: 121  FLHASEDARKEINQWVKGQTEGKIPELLSVGVVDSM-TKLVLVNAIYFKGMWEEKFMTED 179

Query: 833  TKKRTFVAADGKSYQVPMLAQLSVFRCGSTSTPSDLWYNFIELPYHGESISMLIALPTE- 1009
            T    F  +   +  V M+ Q   F  G  S   DL    +E+PY G  +SM+I LP + 
Sbjct: 180  TTDAPFRLSKKDTKTVKMMYQKKKFPFGYIS---DLKCKVLEMPYQGGELSMVILLPKDI 236

Query: 1010 --SSTPLSAIIPHISTKTIDSWMS--TMVPKRVQVILPKFTAVAQTDLKEPLKVLGVTEM 1177
               ST L  I   I+ + +  W     +    V V LP+F       L   L  LGV ++
Sbjct: 237  EDESTGLKKIEKQITLEKLLEWTKRENLEFIDVHVKLPRFKIEESYTLNSNLGRLGVQDL 296

Query: 1178 FDPSKANFAKITRSENLPVSHILQKAKIEVSEDGTKASAATTAILIARSSPP--WFIVDR 1351
            F  SKA+ + ++ S +L +S I+ K+ +EV+E+GT+A+AAT  I       P   F VD 
Sbjct: 297  FSSSKADLSGMSGSRDLFISKIVHKSFVEVNEEGTEAAAATGGIATFCMLLPEEEFTVDH 356

Query: 1352 PFLFFIRHNPTSAVLFMG 1405
            PF+FFIRHNPTS VLF+G
Sbjct: 357  PFIFFIRHNPTSNVLFLG 374


>ref|NP_543120.1| antithrombin-III precursor [Mus musculus].
          Length = 465

 Score =  172 bits (436), Expect = 6e-43
 Identities = 114/359 (31%), Positives = 188/359 (52%), Gaps = 14/359 (3%)
 Frame = +2

Query: 371  HDNIVISPHGIASVLGMLQLGADGRTKKQLTTVMRYGV------NGVGKVLKKINKAIVS 532
            +DNI +SP  I++   M +LGA   T KQL  V ++        + +     K+N  +  
Sbjct: 106  NDNIFLSPLSISTAFAMTKLGACNDTLKQLMEVFKFDTISEKTSDQIHFFFAKLNCRLYR 165

Query: 533  KKNK--DIVTVANAVFVKNGFKMEVPFVTRNKDVFQCEVRNADF-EDPASACDSINLWVR 703
            K NK  D+V+ AN +F          +   ++ V+  +++  DF E+P  +  +IN WV 
Sbjct: 166  KANKSSDLVS-ANRLFGDKSLTFNESYQDVSEVVYGAKLQPLDFKENPEQSRVTINNWVA 224

Query: 704  NETRGMIXXXXXXXXXXXXXTRLVLVNAVYFKGLWKSRFQPENTKKRTFVAADGKSYQVP 883
            N+T G I             T LVLVN +YFKGLWKS+F PENT+K  F   DG+S  VP
Sbjct: 225  NKTEGRIKDVIPQGAINEL-TALVLVNTIYFKGLWKSKFSPENTRKEPFYKVDGQSCPVP 283

Query: 884  MLAQLSVFRCGSTSTPSDLWYNFIELPYHGESISMLIALPTESSTPLSAIIPHISTKTID 1063
            M+ Q   F+    +  + +    +ELP+ G+ I+M++ LP    + L+ +   ++ + + 
Sbjct: 284  MMYQEGKFKYRRVAEGTQV----LELPFKGDDITMVLILPKPEKS-LAKVEQELTPELLQ 338

Query: 1064 SWMSTMVPKRVQVILPKFTAVAQTDLKEPLKVLGVTEMFDPSKANFAKITRS--ENLPVS 1237
             W+  +    + V +P+F       LKE L+ +G+ ++F P K+    I     ++L VS
Sbjct: 339  EWLDELSETMLVVHMPRFRTEDGFSLKEQLQDMGLIDLFSPEKSQLPGIVAGGRDDLYVS 398

Query: 1238 HILQKAKIEVSEDGTKASAATTAILIARSSPP---WFIVDRPFLFFIRHNPTSAVLFMG 1405
                KA +EV+E+G++A+A+T+ ++  RS  P    F  +RPFL  IR    + ++FMG
Sbjct: 399  DAFHKAFLEVNEEGSEAAASTSVVITGRSLNPNRVTFKANRPFLVLIREVALNTIIFMG 457


>ref|NP_035582.1| serine (or cysteine) proteinase inhibitor, clade B, member 9b [Mus
            musculus].
          Length = 377

 Score =  171 bits (434), Expect = 1e-42
 Identities = 117/379 (30%), Positives = 188/379 (49%), Gaps = 12/379 (3%)
 Frame = +2

Query: 305  SLEELGSDTGIQVFNQIVKSRPHDNIVISPHGIASVLGMLQLGADGRTKKQLTTVM---- 472
            +L E      I +   + +S P  N+  SP  I+S L M+ LGA  +T  Q++  +    
Sbjct: 3    TLSEANGTFAIHLLKMLCQSNPSKNVCFSPVSISSALAMVLLGAKEQTAVQISQALGLKK 62

Query: 473  RYGVN-GVGKVLKKINKAIVSKKNKDIVTVANAVFVKNGFKMEVPFVTRNKDVFQCEVRN 649
              G++ G  K+L+K+NK       K  + VAN +F     ++   F       +  E+  
Sbjct: 63   EKGIHQGFLKLLRKLNKP----DRKYSLIVANRLFADKTCEVLQTFKESCFRFYDSEMEQ 118

Query: 650  ADFEDPA-SACDSINLWVRNETRGMIXXXXXXXXXXXXXTRLVLVNAVYFKGLWKSRFQP 826
             +F   A  +   IN WV  +T G I             TRLVLVNA+YFKG+W  +F  
Sbjct: 119  VNFFKAAVESRQCINTWVSKQTEGKIPELLADDSVNFQ-TRLVLVNALYFKGMWACQFCK 177

Query: 827  ENTKKRTFVAADGKSYQVPMLAQLSVFRCGSTSTPSDLWYNFIELPYHGESISMLIALPT 1006
            E+T++  F     +   V M+ Q   F         +L    + +PY G  +S+++ LP 
Sbjct: 178  ESTREMPFYINKDEKRPVQMMCQTDTFMFAFVD---ELPARLLIMPYEGMELSLMVLLP- 233

Query: 1007 ESSTPLSAIIPHISTKTIDSWMST--MVPKRVQVILPKFTAVAQTDLKEPLKVLGVTEMF 1180
            E    LS +   ++ + + +W     M    V+V LPKF      ++K  L+ LG+ ++F
Sbjct: 234  EKGVDLSKVENDLTFEKLIAWTKPDIMWSTEVKVFLPKFKLQEDYEMKSVLQCLGIVDVF 293

Query: 1181 DPSKANFAKITRSENLPVSHILQKAKIEVSEDGTKASAATTA----ILIARSSPPWFIVD 1348
            +  KA+ + ++   NL +S  + K+ +EV+E+GT+A+AA++A     L     P WF  D
Sbjct: 294  EKEKADLSAMSPERNLCLSKFIHKSVVEVNEEGTEAAAASSAEGIIPLCLGGGPSWFCAD 353

Query: 1349 RPFLFFIRHNPTSAVLFMG 1405
             PFLFFIRHN T+++LF G
Sbjct: 354  HPFLFFIRHNQTNSILFCG 372


>ref|NP_941373.1| serine (or cysteine) proteinase inhibitor, clade b, member 3b [Mus
            musculus].
          Length = 387

 Score =  169 bits (429), Expect = 4e-42
 Identities = 121/378 (32%), Positives = 193/378 (51%), Gaps = 21/378 (5%)
 Frame = +2

Query: 335  IQVFNQIVKSRPHDNIVISPHGIASVLGMLQLGADGRTKKQLTTVMRYGVNGVGKVLKK- 511
            ++++ Q+ +S    NI  SP  + + L MLQLGA G T+ Q+  V+++ +    K  +K 
Sbjct: 13   VEMYRQLRES--DKNIFYSPISMMTALAMLQLGAKGNTEIQIEKVLQF-IETTKKTTEKS 69

Query: 512  ------------INKAI--VSKKNKDI-VTVANAVFVKNGFKMEVPFVTRNKDVFQCEVR 646
                          K I  ++K N D  +  AN+++   GF     F+   K+ +Q +V 
Sbjct: 70   EHCDDEENVHEQFQKLITQLNKSNDDYDLKAANSIYGAKGFPFLQTFLEDIKEYYQAKVE 129

Query: 647  NADFEDPASACDS-INLWVRNETRGMIXXXXXXXXXXXXXTRLVLVNAVYFKGLWKSRFQ 823
            + DFE      +  IN WV ++T G I             T LVLVNAVYFKG W  +F 
Sbjct: 130  SLDFEHATEESEKKINSWVESKTNGKIKDLFPSGSLSSS-TILVLVNAVYFKGQWNRKFN 188

Query: 824  PENTKKRTFVAADGKSYQVPMLAQLSVFRCGSTSTPSDLWYNFIELPYHGESISMLIALP 1003
              +T++  F      S  V M+ Q + F   + S   D+    +E+PY G+ +SM + LP
Sbjct: 189  ENHTREEKFWLNKNTSKPVQMMKQRNKF---NFSFLGDVHAQIVEIPYKGKDLSMFVLLP 245

Query: 1004 TESSTPLSAIIPHISTKTIDSWMST--MVPKRVQVILPKFTAVAQTDLKEPLKVLGVTEM 1177
             E    L  +   ++T  +  W+    M    + + LP+F    + DL+ PL+ +G+ + 
Sbjct: 246  MEIDG-LKQLEEQLTTDKLLEWIKAENMHLTELYLSLPRFKVEEKYDLQVPLEHMGMVDA 304

Query: 1178 FDPSKANFAKITRSENLPVSHILQKAKIEVSEDGTKASAATTAILIARSS--PPWFIVDR 1351
            FDP KA+F+ ++    L VS +L K+ +EV+E+GT+A+AAT   +  RS+     F  D 
Sbjct: 305  FDPQKADFSGMSSIPGLVVSKVLHKSFVEVNEEGTEAAAATGVEVSVRSAQIAEDFCCDH 364

Query: 1352 PFLFFIRHNPTSAVLFMG 1405
            PFLFFI H  T+++LF G
Sbjct: 365  PFLFFIIHRMTNSILFFG 382


>ref|NP_033152.3| serine peptidase inhibitor, clade B, member 3A [Mus musculus].
          Length = 387

 Score =  167 bits (422), Expect = 2e-41
 Identities = 114/377 (30%), Positives = 188/377 (49%), Gaps = 20/377 (5%)
 Frame = +2

Query: 335  IQVFNQIVKSRPHDNIVISPHGIASVLGMLQLGADGRTKKQLTTVMRYGVN--------- 487
            ++++ Q+ +S   +NI  SP  + + L MLQLGA G T+KQ+  V+++            
Sbjct: 13   LELYRQLRES--DNNIFYSPISMMTALAMLQLGAKGNTEKQIEKVLQFNETTKKTTEKSA 70

Query: 488  ------GVGKVLKKINKAIVSKKNKDIVTVANAVFVKNGFKMEVPFVTRNKDVFQCEVRN 649
                   V +  +K+   +    +   +  AN+++   GF     F+   K+ +Q  V +
Sbjct: 71   HCHDEENVHEQFQKLMTQLNKSNDAYDLKAANSIYGAKGFPFVQTFLEDIKEYYQANVES 130

Query: 650  ADFEDPASACDS-INLWVRNETRGMIXXXXXXXXXXXXXTRLVLVNAVYFKGLWKSRFQP 826
             DFE  A   +  IN WV ++T G I             T +VLVNAVYFKG W  +F  
Sbjct: 131  LDFEHAAEESEKKINSWVESQTNGKIKDLFPNGSLNRS-TIMVLVNAVYFKGQWNHKFDE 189

Query: 827  ENTKKRTFVAADGKSYQVPMLAQLSVFRCGSTSTPSDLWYNFIELPYHGESISMLIALPT 1006
            ++T +  F      S  V M+ Q   F   +     D+    +E+PY G+ +SM++ LP 
Sbjct: 190  KHTTEEKFWLNKNTSKPVQMMKQNIEF---NFMFLEDVQAKIVEIPYKGKELSMIVLLPV 246

Query: 1007 ESSTPLSAIIPHISTKTIDSWM--STMVPKRVQVILPKFTAVAQTDLKEPLKVLGVTEMF 1180
            E +  L  +   ++   +  W     M    + + LP+F    + DL  PL+ +G+ + F
Sbjct: 247  EING-LKQLEEQLTADKLLEWTRAENMHMTELYLSLPRFKVDEKYDLPIPLEHMGMVDAF 305

Query: 1181 DPSKANFAKITRSENLPVSHILQKAKIEVSEDGTKASAAT--TAILIARSSPPWFIVDRP 1354
            DP KA+F+ ++ ++ L VS +L K+ +EV+E+GT+A+AAT     L +      F  D P
Sbjct: 306  DPQKADFSGMSSTQGLVVSKVLHKSFVEVNEEGTEAAAATGVEVSLTSAQIAEDFCCDHP 365

Query: 1355 FLFFIRHNPTSAVLFMG 1405
            FLFFI H  T+++LF G
Sbjct: 366  FLFFIIHRKTNSILFFG 382


  Database: RefSeq49_MP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 15,617,559
  Number of sequences in database:  30,036
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 42,857,153
Number of extensions: 1114089
Number of successful extensions: 3684
Number of sequences better than 1.0e-05: 80
Number of HSP's gapped: 3435
Number of HSP's successfully gapped: 82
Length of query: 468
Length of database: 15,617,559
Length adjustment: 105
Effective length of query: 363
Effective length of database: 12,463,779
Effective search space: 4524351777
Effective search space used: 4524351777
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

Search to RefSeqSP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-003048
         (1406 letters)

Database: RefSeq49_SP.fasta 
           24,897 sequences; 11,343,932 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_999452.1| nexin-1 [Sus scrofa].                                745   0.0  
Alignment   gi|XP_003359709.1| PREDICTED: glia-derived nexin-like [Sus scro...   403   e-112
Alignment   gi|NP_999075.1| plasminogen activator inhibitor 1 precursor [Su...   283   2e-76
Alignment   gi|XP_003132567.1| PREDICTED: serpin I2 [Sus scrofa].                204   1e-52
Alignment   gi|XP_001927897.2| PREDICTED: LOW QUALITY PROTEIN: serpin E3-li...   184   8e-47
Alignment   gi|XP_001925217.2| PREDICTED: serpin B11-like [Sus scrofa].          174   8e-44
Alignment   gi|XP_003353495.1| PREDICTED: serpin B8 [Sus scrofa].                167   2e-41
Alignment   gi|NP_001104726.1| serpin B9 [Sus scrofa].                           161   7e-40
Alignment   gi|NP_001123430.1| antithrombin-III [Sus scrofa].                    160   2e-39
Alignment   gi|XP_003121745.1| PREDICTED: plasminogen activator inhibitor 2...   160   2e-39

>ref|NP_999452.1| nexin-1 [Sus scrofa].
          Length = 397

 Score =  745 bits (1923), Expect = 0.0
 Identities = 377/392 (96%), Positives = 377/392 (96%)
 Frame = +2

Query: 230  MNWHFPFFLVATVTLPSVCSQFNPLSLEELGSDTGIQVFNQIVKSRPHDNIVISPHGIAS 409
            MNWHFPFFLVATVTLPSVCSQFNPLSLEELGSDTGIQVFNQIVKSRPHDNIVISPHGIAS
Sbjct: 1    MNWHFPFFLVATVTLPSVCSQFNPLSLEELGSDTGIQVFNQIVKSRPHDNIVISPHGIAS 60

Query: 410  VLGMLQLGADGRTKKQLTTVMRYGVNGVGKVLKKINKAIVSKKNKDIVTVANAVFVKNGF 589
            VLGMLQLGADGRTKKQLTTVMRYGVNGVGKVLKKINKAIVSKKNKDIVTVANAVFVKNGF
Sbjct: 61   VLGMLQLGADGRTKKQLTTVMRYGVNGVGKVLKKINKAIVSKKNKDIVTVANAVFVKNGF 120

Query: 590  KMEVPFVTRNKDVFQCEVRNADFEDPASACDSINLWVRNETRGMIXXXXXXXXXXXXXTR 769
            KMEVPFVTRNKDVFQCEVRNADFEDPASACDSINLWVRNETRGMI             TR
Sbjct: 121  KMEVPFVTRNKDVFQCEVRNADFEDPASACDSINLWVRNETRGMIDSLLSPDLLDSVLTR 180

Query: 770  LVLVNAVYFKGLWKSRFQPENTKKRTFVAADGKSYQVPMLAQLSVFRCGSTSTPSDLWYN 949
            LVLVNAVYFKGLWKSRFQPENTKKRTFVAADGKSYQVPMLAQLSVFRCGSTSTPSDLWYN
Sbjct: 181  LVLVNAVYFKGLWKSRFQPENTKKRTFVAADGKSYQVPMLAQLSVFRCGSTSTPSDLWYN 240

Query: 950  FIELPYHGESISMLIALPTESSTPLSAIIPHISTKTIDSWMSTMVPKRVQVILPKFTAVA 1129
            FIELPYHGESISMLIALPTESSTPLSAIIPHISTKTIDSWMSTMVPKRVQVILPKFTAVA
Sbjct: 241  FIELPYHGESISMLIALPTESSTPLSAIIPHISTKTIDSWMSTMVPKRVQVILPKFTAVA 300

Query: 1130 QTDLKEPLKVLGVTEMFDPSKANFAKITRSENLPVSHILQKAKIEVSEDGTKASAATTAI 1309
            QTDLKEPLKVLGVTEMFDPSKANFAKITRSENL VSHILQKAKIEVSEDGTKASAATTAI
Sbjct: 301  QTDLKEPLKVLGVTEMFDPSKANFAKITRSENLHVSHILQKAKIEVSEDGTKASAATTAI 360

Query: 1310 LIARSSPPWFIVDRPFLFFIRHNPTSAVLFMG 1405
            LIARSSPPWFIVDRPFLFFIRHNPT AVLFMG
Sbjct: 361  LIARSSPPWFIVDRPFLFFIRHNPTGAVLFMG 392


>ref|XP_003359709.1| PREDICTED: glia-derived nexin-like [Sus scrofa].
          Length = 315

 Score =  403 bits (1036), Expect = e-112
 Identities = 208/224 (92%), Positives = 208/224 (92%), Gaps = 1/224 (0%)
 Frame = +2

Query: 716  GMIXXXXXXXXXXXXXTRLVLVNAVYFKGLWKSRFQPENTKKRTFVAADGKSYQVPMLAQ 895
            GMI             TRLVLVNAVYFKGLWKSRFQPENTKKRTFVAADGKSYQVPMLAQ
Sbjct: 81   GMIDSLLSPDLLDSVLTRLVLVNAVYFKGLWKSRFQPENTKKRTFVAADGKSYQVPMLAQ 140

Query: 896  LSVFRCGSTSTPSDLWYNFIELPYHGESISMLIALPTESSTPLSAIIPHISTKTIDSWMS 1075
            LSVFRCGSTSTPSDLWYNFIELPYHGESISMLIALPTESSTPLSAIIPHISTKTIDSWMS
Sbjct: 141  LSVFRCGSTSTPSDLWYNFIELPYHGESISMLIALPTESSTPLSAIIPHISTKTIDSWMS 200

Query: 1076 TMVPKRVQVILPKFTAVAQTDLKEPLKVLGVTEMFDPSKANFAKITR-SENLPVSHILQK 1252
            TMVPKRVQVILPKFTAVAQTDLKEPLKVLGVTEMFDPSKANFAKIT  SENL VSHILQK
Sbjct: 201  TMVPKRVQVILPKFTAVAQTDLKEPLKVLGVTEMFDPSKANFAKITTGSENLHVSHILQK 260

Query: 1253 AKIEVSEDGTKASAATTAILIARSSPPWFIVDRPFLFFIRHNPT 1384
            AKIEVSEDGTKASAATTAILIARSSPPWFIVDRPFLFFIRHNPT
Sbjct: 261  AKIEVSEDGTKASAATTAILIARSSPPWFIVDRPFLFFIRHNPT 304


>ref|NP_999075.1| plasminogen activator inhibitor 1 precursor [Sus scrofa].
          Length = 402

 Score =  283 bits (723), Expect = 2e-76
 Identities = 150/365 (41%), Positives = 223/365 (61%), Gaps = 2/365 (0%)
 Frame = +2

Query: 317  LGSDTGIQVFNQIVKSRPHDNIVISPHGIASVLGMLQLGADGRTKKQLTTVMRYGVN--G 490
            L +D G++VF Q+V++    N+V SP+G+ASVL MLQL   G T++Q+   M++ +   G
Sbjct: 34   LATDFGVKVFRQVVQASKDRNVVFSPYGVASVLAMLQLTTAGDTQQQIQEAMQFKIEEKG 93

Query: 491  VGKVLKKINKAIVSKKNKDIVTVANAVFVKNGFKMEVPFVTRNKDVFQCEVRNADFEDPA 670
            +   L+++ K ++   NKD ++ A+A+FV+   K+   F+     +F+  V+  DF +  
Sbjct: 94   MAPALRQLYKELMGPWNKDEISTADAIFVQRDLKLVQGFMPYFFRLFRTTVKQVDFSEMD 153

Query: 671  SACDSINLWVRNETRGMIXXXXXXXXXXXXXTRLVLVNAVYFKGLWKSRFQPENTKKRTF 850
             A   IN WV+  T+GMI             TRLVLVNA+YF G WK+ F  ++T  R F
Sbjct: 154  RARFIINDWVKRHTKGMINDLLGQGAVDQL-TRLVLVNALYFNGQWKTPFPEKSTHHRLF 212

Query: 851  VAADGKSYQVPMLAQLSVFRCGSTSTPSDLWYNFIELPYHGESISMLIALPTESSTPLSA 1030
              +DG +  VPM+AQ + F     STP   +Y+ +ELPYHG ++SM IA P E   PLSA
Sbjct: 213  HKSDGSTVSVPMMAQTNKFNYTEFSTPDGHYYDILELPYHGNTLSMFIAAPYEKEVPLSA 272

Query: 1031 IIPHISTKTIDSWMSTMVPKRVQVILPKFTAVAQTDLKEPLKVLGVTEMFDPSKANFAKI 1210
            +   +  + I  W   M      ++LPKF+  ++ DL+ PL+ LG+T+MF P++A+F+ +
Sbjct: 273  LTSILDAQLISQWKGNMTRLTRLLVLPKFSLESEVDLRRPLENLGMTDMFRPNQADFSSL 332

Query: 1211 TRSENLPVSHILQKAKIEVSEDGTKASAATTAILIARSSPPWFIVDRPFLFFIRHNPTSA 1390
            +  E L +S  LQK KIEV+E GT AS++T  I+ AR +P   I+DRPFLF +RHNPT  
Sbjct: 333  SDQELLYMSQALQKVKIEVNESGTVASSSTAIIVSARMAPEEIIMDRPFLFVVRHNPTGT 392

Query: 1391 VLFMG 1405
            VLFMG
Sbjct: 393  VLFMG 397


>ref|XP_003132567.1| PREDICTED: serpin I2 [Sus scrofa].
          Length = 405

 Score =  204 bits (518), Expect = 1e-52
 Identities = 120/350 (34%), Positives = 199/350 (56%), Gaps = 6/350 (1%)
 Frame = +2

Query: 374  DNIVISPHGIASVLGMLQLGADGRTKKQLTTVMRYGVNGVGK---VLKKINKAIVSKKNK 544
            +NI+ISP G    LGM+ LGA G+ ++Q+   +++     G+   VLK    AI  KK +
Sbjct: 43   NNIIISPLGTTLALGMIHLGAKGKAQQQIRQTLKFQETATGEEFSVLKSFFSAISEKKQE 102

Query: 545  DIVTVANAVFVKNGFKMEVPFVTRNKDVFQCEVRNADFEDPASACDSINLWVRNETRGMI 724
               ++ANA++++ GF ++  ++  NK+ FQ  ++  DF++  +  ++I+ WV ++T G I
Sbjct: 103  FTFSLANALYLQEGFTVKEQYLHGNKEFFQSAIKLVDFQNAKACAETISTWVESKTDGKI 162

Query: 725  XXXXXXXXXXXXXTRLVLVNAVYFKGLWKSRFQPENTKKRTFVAADGKSYQVPMLAQLSV 904
                         TRLVLVNA+YFKG WK RF+ E+T+   F   DG + +VPM+  L  
Sbjct: 163  KDMFSGEEFGPL-TRLVLVNAIYFKGDWKQRFRKEDTQLMNFTQKDGVAVKVPMMKALLR 221

Query: 905  FRCGSTSTPSDLWYNFIELPYHGESISMLIALPTESSTPLSAIIPHISTKTIDSWMSTMV 1084
             + G  S  S +    +ELPY  +  S++I LP E    +  +   I+   I  W S M 
Sbjct: 222  TKYGYFS-ESSMNCQVLELPYKDDEFSLIIILPAE-DVNIEEMEKLITAHQILQWFSEMQ 279

Query: 1085 PKRVQVILPKFTAVAQTDLKEPLKVLGVTEMFDPSKANFAKITRSENLPVSHILQKAKIE 1264
             + V++ LP+F    + D K+ L  L +TE+F     + + IT S  + VS ++QK   E
Sbjct: 280  EEEVKISLPRFKVEQKLDFKQALYSLNITEIFS-GGCDLSGITDSSEVYVSQVMQKVFFE 338

Query: 1265 VSEDGTKASAAT---TAILIARSSPPWFIVDRPFLFFIRHNPTSAVLFMG 1405
            ++EDG++A+++T   T ++++ S    FI + PFLF +++NPT ++LFMG
Sbjct: 339  INEDGSEAASSTGIHTPVIMSLSQNQ-FIANHPFLFIMKNNPTESILFMG 387


>ref|XP_001927897.2| PREDICTED: LOW QUALITY PROTEIN: serpin E3-like [Sus scrofa].
          Length = 478

 Score =  184 bits (468), Expect = 8e-47
 Identities = 112/373 (30%), Positives = 183/373 (49%), Gaps = 14/373 (3%)
 Frame = +2

Query: 323  SDTGIQVFNQIVKSRPHDNIVISPHGIASVLGMLQLGADGRTKKQLTTVMRYGVNG--VG 496
            ++  ++++  +  +    N+V+SP  +   L +L  GA G T +QL   + Y V+   V 
Sbjct: 88   TELALRLYRSVAATSNQTNLVLSPASVCIPLELLHFGAQGNTGRQLAEALGYTVHDPRVR 147

Query: 497  KVLKKINKAIVSKKNKDIVTVANAVFVKNGFKMEVPFVTRNKDVFQCEVRNADFEDPASA 676
            + L+ +   + S      + +A  ++V+ G  +   FV +        +  A+  +P   
Sbjct: 148  EWLRAVYATLPSASPGAKLELACTLYVQEGTPLAPCFVEQVSRWANSSLEPANLREPKGT 207

Query: 677  CDSINLWVRNETRGMIXXXXXXXXXXXXXT------------RLVLVNAVYFKGLWKSRF 820
                N W    T G               +            +LVL++ + F+  W+ RF
Sbjct: 208  TLLANGWASGPTAGKGKPSGRGGSTWTRSSGGGGDGGGSASAQLVLLSTMTFQSAWRQRF 267

Query: 821  QPENTKKRTFVAADGKSYQVPMLAQLSVFRCGSTSTPSDLWYNFIELPYHGESISMLIAL 1000
               +T+   F  A G   QVPM+ Q++    G    P+      +ELPY G ++S+L+ L
Sbjct: 268  SSSDTQLLPFTCARGLVLQVPMMYQMAEVNYGQFQDPAGHQVGVLELPYLGSAVSLLLVL 327

Query: 1001 PTESSTPLSAIIPHISTKTIDSWMSTMVPKRVQVILPKFTAVAQTDLKEPLKVLGVTEMF 1180
            P +  TPLS I PH++   + +W S++   R+ V LP+F      +LK  L   G+T++F
Sbjct: 328  PHDRDTPLSHIEPHLTASILHTWTSSLKRARMDVFLPRFRIQNHFNLKNILYSWGLTDLF 387

Query: 1181 DPSKANFAKITRSENLPVSHILQKAKIEVSEDGTKASAATTAILIARSSPPWFIVDRPFL 1360
            DP KAN   I+  + L VS  + KAK+EV+E+GTKASAAT  +L+ RS  P F  DRPF+
Sbjct: 388  DPLKANLKGISGQDGLYVSEAIHKAKVEVAEEGTKASAATALLLLKRSRIPIFKADRPFI 447

Query: 1361 FFIRHNPTSAVLF 1399
            FF+R   T   +F
Sbjct: 448  FFLREPNTGITVF 460


>ref|XP_001925217.2| PREDICTED: serpin B11-like [Sus scrofa].
          Length = 392

 Score =  174 bits (442), Expect = 8e-44
 Identities = 112/390 (28%), Positives = 195/390 (50%), Gaps = 23/390 (5%)
 Frame = +2

Query: 305  SLEELGSDTGIQVFNQIVKSRPHDNIVISPHGIASVLGMLQLGADGRTKKQLTTVMRYG- 481
            SL     +  + VF ++  +   DN+  SP  +   L M+ LGA G + +Q+  V+ +  
Sbjct: 3    SLSNANVEFCLDVFKELSSNHGGDNVFFSPLSLLYALSMILLGARGNSAEQMEKVLHFNH 62

Query: 482  --------------VNGVGKVLKKINKAIVSKKNKD---IVTVANAVFVKNGFKMEVPFV 610
                           + +G++  +           D    +++AN ++          ++
Sbjct: 63   IAESLGPEFKDSAKCSQIGRIHSQFGVLFSQINQPDSNYTLSIANRLYGTKAMAFHKQYL 122

Query: 611  TRNKDVFQCEVRNADFEDPASAC-DSINLWVRNETRGMIXXXXXXXXXXXXXTRLVLVNA 787
              ++ ++Q  ++  DFE  A     +IN WV ++T G +               +VLVNA
Sbjct: 123  NCSEKLYQASLQTVDFEWSAEETRKTINAWVESKTNGKVTNLFGKGTIDSSCV-MVLVNA 181

Query: 788  VYFKGLWKSRFQPENTKKRTFVAADGKSYQVPMLAQLSVFRCGSTSTPSDLWYNFIELPY 967
            +YFKG W+++FQ + T K  F  + GKS  V M+ Q   F+  +   P       +ELPY
Sbjct: 182  IYFKGQWQNKFQEKETVKTPFQLSKGKSVIVEMMCQTGKFKLATIKEPQ---MQVLELPY 238

Query: 968  HGESISMLIALPTESSTPLSAIIPHISTKTIDSWMS--TMVPKRVQVILPKFTAVAQTDL 1141
                +SM+I LP   +  L  +   +++KT   W S   MV + V+V LP+F    + +L
Sbjct: 239  VNHELSMIILLPV-GTNDLDQVERQLNSKTFQEWTSPSNMVERDVEVHLPRFKLEIKYEL 297

Query: 1142 KEPLKVLGVTEMFDPSKANFAKITRSENLPVSHILQKAKIEVSEDGTKASAATTAILIAR 1321
               LK LG+T++F+  KA+ + ++ ++ L VS ++ K+ ++V+E+GT+A+AAT  IL+ +
Sbjct: 298  NSLLKSLGMTDIFNWVKADLSGMSSAKGLYVSKVIHKSYVDVNEEGTEAAAATGDILVVK 357

Query: 1322 SSP--PWFIVDRPFLFFIRHNPTSAVLFMG 1405
              P    F+ + PFLFFIRH  T+ +LF G
Sbjct: 358  RLPIRAQFVANHPFLFFIRHIHTNTLLFCG 387


>ref|XP_003353495.1| PREDICTED: serpin B8 [Sus scrofa].
          Length = 374

 Score =  167 bits (422), Expect = 2e-41
 Identities = 113/375 (30%), Positives = 195/375 (52%), Gaps = 9/375 (2%)
 Frame = +2

Query: 308  LEELGSDTGIQVFNQIVKSRPHDNIVISPHGIASVLGMLQLGADGRTKKQLTTVMRYGVN 487
            L E      I +   + +     N+ +SP  ++S L M+ LGA G T+ Q++  +   +N
Sbjct: 4    LREANGTFAINLLKMLSEEDNLRNVFLSPLSLSSALAMVLLGAKGNTEAQMSQALC--LN 61

Query: 488  GVGKVLKKINKAIVSKKNKD----IVTVANAVFVKNGFKMEVPFVTRNKDVFQCEVRNAD 655
             VG V +   ++++ + NK     ++  AN +F +        F    ++ ++ ++    
Sbjct: 62   RVGDVHQSF-QSLLKEMNKSTTQCLLRTANRLFGEKTCDFLPAFKESCQNFYEADLEELS 120

Query: 656  FEDPASACDS-INLWVRNETRGMIXXXXXXXXXXXXXTRLVLVNAVYFKGLWKSRFQPEN 832
            F +    C   IN WV+ +T G I             T+LVLVNA+YFKG W  +F  + 
Sbjct: 121  FAEDTEECRKHINDWVKEKTEGKISEILGAGTVGPL-TKLVLVNAIYFKGKWNKQFDRKY 179

Query: 833  TKKRTFVAADGKSYQVPMLAQLSVFRCGSTSTPSDLWYNFIELPYHGESISMLIALPTES 1012
            T+   F     K   V M+ + + F+ G      ++    +ELPY GE +SM+I LP + 
Sbjct: 180  TRGMPFKTNQEKK-TVQMMFKQAKFKMGYVD---EVHAQVLELPYVGEELSMVILLP-DD 234

Query: 1013 STPLSAIIPHISTKTIDSWMST--MVPKRVQVILPKFTAVAQTDLKEPLKVLGVTEMFDP 1186
            +T L+ +   ++ +   +W +   +   +VQV LP+       DL+  L+ LG+ + F+ 
Sbjct: 235  NTDLAVVEKALTYEKFRAWTNPEKLTEDKVQVFLPRLKLEESYDLEAFLRSLGMIDAFEE 294

Query: 1187 SKANFAKITRSENLPVSHILQKAKIEVSEDGTKASAATTAILIARSS--PPWFIVDRPFL 1360
            +KA+F+ ++  +N+PVS ++ K  +EV+E+GT+A+AAT  +  +R S   P F  D PFL
Sbjct: 295  AKADFSGMSVRKNVPVSKVMHKCFVEVNEEGTEAAAATAVVRNSRCSRIEPRFCADHPFL 354

Query: 1361 FFIRHNPTSAVLFMG 1405
            FFIRH  T+++LF G
Sbjct: 355  FFIRHLETNSILFCG 369


>ref|NP_001104726.1| serpin B9 [Sus scrofa].
          Length = 375

 Score =  161 bits (408), Expect = 7e-40
 Identities = 115/376 (30%), Positives = 182/376 (48%), Gaps = 9/376 (2%)
 Frame = +2

Query: 305  SLEELGSDTGIQVFNQIVKSRPHDNIVISPHGIASVLGMLQLGADGRTKKQLTTVMRYGV 484
            +L E      +++   + +  P  N+  SP  I+S L M+ LGA G T  QL  V+    
Sbjct: 3    ALSEANGTFALRLLKILCQDDPSHNVFYSPVSISSALAMVLLGAKGDTAAQLAQVLSLNT 62

Query: 485  NGVGKVLKKINKAIVSKKNKD----IVTVANAVFVKNGFKMEVPFVTRNKDVFQCEVRNA 652
                K + +  +A++++ NK     ++  AN +F +   +    F       +  E+   
Sbjct: 63   E---KDIHQDFQALLAELNKPSTRYLLRTANKLFGEKSREFLSTFKESCLRFYDAELEQL 119

Query: 653  DFEDPASAC-DSINLWVRNETRGMIXXXXXXXXXXXXXTRLVLVNAVYFKGLWKSRFQPE 829
             F   A A    IN WV  +T G I             TRLVLVNAVYFKG W  +F  +
Sbjct: 120  SFASAAEASRKQINAWVSKKTEGKIPEVLPWNSIDEQ-TRLVLVNAVYFKGRWDQQFDKK 178

Query: 830  NTKKRTFVAADGKSYQVPMLAQLSVFRCGSTSTPSDLWYNFIELPYHGESISMLIALPTE 1009
             T++  F     +   V M+ Q + FR G      ++    +ELPY    +SM++ LP +
Sbjct: 179  YTREMPFRVNQKEQRPVQMMFQEATFRLGRVE---EVPAQVLELPYEDRELSMVVLLP-D 234

Query: 1010 SSTPLSAIIPHISTKTIDSWMST--MVPKRVQVILPKFTAVAQTDLKEPLKVLGVTEMFD 1183
                LS +   ++ + + +W     M    V+V LP+F   A  DL+  L  LGV + F 
Sbjct: 235  DHVALSEVERQLTFEKLLAWTKPERMQSLDVEVFLPRFKLDASYDLELLLGHLGVVDAFQ 294

Query: 1184 PSKANFAKITRSENLPVSHILQKAKIEVSEDGTKASAATTAILI--ARSSPPWFIVDRPF 1357
              KA+F+ +    +L +S  + K+ +EV+E+G++A+AA+  +L+     S P F  D PF
Sbjct: 295  QGKADFSAMAPERDLSLSTFVHKSVVEVNEEGSEAAAASALVLMECCMESGPRFCADHPF 354

Query: 1358 LFFIRHNPTSAVLFMG 1405
            LFFIRHN   ++LF G
Sbjct: 355  LFFIRHNKAKSILFCG 370


>ref|NP_001123430.1| antithrombin-III [Sus scrofa].
          Length = 463

 Score =  160 bits (404), Expect = 2e-39
 Identities = 113/358 (31%), Positives = 180/358 (50%), Gaps = 13/358 (3%)
 Frame = +2

Query: 371  HDNIVISPHGIASVLGMLQLGADGRTKKQLTTVMRYGV------NGVGKVLKKINKAIVS 532
            +DNI +SP  I++   M +LGA   T KQL  V ++        + V     K+N  +  
Sbjct: 106  NDNIFLSPLSISTAFAMTKLGACDNTLKQLMEVFKFDTISEKTSDQVHFFFAKLNCRLYR 165

Query: 533  KKNKDIVTV-ANAVFVKNGFKMEVPFVTRNKDVFQCEVRNADFEDPASACDSI-NLWVRN 706
            K NK    V AN +F          +   ++ V+  +++  DF++ A     I N WV N
Sbjct: 166  KANKSSELVSANRLFGDKSLTFNETYQEISEVVYGAKLQPLDFKENAEQSRGIINQWVSN 225

Query: 707  ETRGMIXXXXXXXXXXXXXTRLVLVNAVYFKGLWKSRFQPENTKKRTFVAADGKSYQVPM 886
            +T G I             T LVLVN +YFKG WKS F  ENT+K  F  A+G+S  V M
Sbjct: 226  KTEGRITDVIPPEAINEL-TVLVLVNTIYFKGRWKSEFSSENTRKELFYKANGESCSVSM 284

Query: 887  LAQLSVFRCGSTSTPSDLWYNFIELPYHGESISMLIALPTESSTPLSAIIPHISTKTIDS 1066
            + Q S FR    +  + +    +ELP+ G+ I+M++ LP +    L+ +   ++ + +  
Sbjct: 285  MYQESKFRYRRVAEGTQV----LELPFKGDDITMVLILP-KLEKSLAKVEQELTPEVLQE 339

Query: 1067 WMSTMVPKRVQVILPKFTAVAQTDLKEPLKVLGVTEMFDPSKANFAKITRS--ENLPVSH 1240
            W+  +    + V +P+F       +KE L+ +G+ ++F P KA    I     ++L VS 
Sbjct: 340  WLDELADTLLVVHMPRFHIEDSFSVKERLQDMGLEDLFIPEKAKLPGIVAEGRDDLYVSD 399

Query: 1241 ILQKAKIEVSEDGTKASAATTAILIARSSPP---WFIVDRPFLFFIRHNPTSAVLFMG 1405
               KA +EV+E+G++A+A+TT  +  RS  P    F  +RPFL  IR    + ++FMG
Sbjct: 400  AFHKAFLEVNEEGSEAAASTTIGIAGRSLNPARVTFKANRPFLVLIREVALNTIIFMG 457


>ref|XP_003121745.1| PREDICTED: plasminogen activator inhibitor 2 [Sus scrofa].
          Length = 415

 Score =  160 bits (404), Expect = 2e-39
 Identities = 119/403 (29%), Positives = 187/403 (46%), Gaps = 46/403 (11%)
 Frame = +2

Query: 335  IQVFNQIVKSRPHDNIVISPHGIASVLGMLQLGADGRTKKQLTTVMRYGVNGV------- 493
            +  F  +  +    N+  SP  I+S + M+ LGA G T  Q+  V+++   GV       
Sbjct: 13   LNFFKHLANTSAAQNLFFSPWSISSTMAMVYLGARGNTADQMAKVLQFNKVGVHEGIPVT 72

Query: 494  ------GKVLKKINK-------------------------AIVSKKNKDIVTVANAVFVK 580
                  G V++ + K                         AI +     ++  AN +F +
Sbjct: 73   LESFTSGDVMQHVQKGPYPDAILQAQAAGKIHSSFYSLSSAINASTGAYVLESANKLFGE 132

Query: 581  NGFKMEVPFVTRNKDVFQCEVRNADFEDPAS-ACDSINLWVRNETRGMIXXXXXXXXXXX 757
               + +  ++  +K  +  E +  DF + A  A   IN WV+ +T+G I           
Sbjct: 133  KSSRFKEEYIRLSKKYYSTEPQEVDFLECAEEARKKINSWVKIQTKGKIPSLLPEGSVDA 192

Query: 758  XXTRLVLVNAVYFKGLWKSRFQPENTKKRTFVAADGKSYQVPMLAQLSVFRCGSTSTPSD 937
              T++VLVNAVYFKG WK+ FQ +      F     K   V M+        G  +   D
Sbjct: 193  E-TKMVLVNAVYFKGKWKTPFQKKLNGLYPFRVNLTKRIPVQMMLLHEKLNIGYLA---D 248

Query: 938  LWYNFIELPYHGESISMLIALP---TESSTPLSAIIPHISTKTIDSWMS--TMVPKRVQV 1102
            L    +ELPY G+ +SM + LP    ESST L  +   I+   +++W+S  TM    V+V
Sbjct: 249  LKAQILELPYAGD-VSMFLLLPDEVAESSTGLELLESEITYDKLNTWISEDTMAEDDVEV 307

Query: 1103 ILPKFTAVAQTDLKEPLKVLGVTEMFDPSKANFAKITRSENLPVSHILQKAKIEVSEDGT 1282
             LP+F      +LK  L  +G+ E F   +ANF  ++   +L +S +  +A ++V+E+GT
Sbjct: 308  YLPQFKLEEHYELKSILSRMGMDEAFSQGQANFLGMSEKNDLYLSQVFHQASVDVNEEGT 367

Query: 1283 KASAATTAILIARS--SPPWFIVDRPFLFFIRHNPTSAVLFMG 1405
            +A+A T AIL  R+    P F+ D PFLF I H  T  +LF+G
Sbjct: 368  EAAAGTGAILSGRTGHGGPQFVADHPFLFLIMHKTTKNILFLG 410


  Database: RefSeq49_SP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 11,343,932
  Number of sequences in database:  24,897
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 31,790,738
Number of extensions: 848760
Number of successful extensions: 2725
Number of sequences better than 1.0e-05: 40
Number of HSP's gapped: 2623
Number of HSP's successfully gapped: 42
Length of query: 468
Length of database: 11,343,932
Length adjustment: 103
Effective length of query: 365
Effective length of database: 8,779,541
Effective search space: 3204532465
Effective search space used: 3204532465
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

Search to Sscrofa10_2

BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-003048
         (1406 letters)

Database: Sscrofa_10.2.fasta 
           4582 sequences; 2,808,509,378 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Sscrofa_Chr15                                                         529   e-147
Sscrofa_Chr01                                                          78   1e-11

>Sscrofa_Chr15 
||          Length = 157681621

 Score =  529 bits (267), Expect = e-147
 Identities = 279/283 (98%)
 Strand = Plus / Minus

                                                                             
Query: 207       ggttgtccttgccggaaggaaccatgaattggcattttcccttcttcctcgtggccaccg 266
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139211781 ggttgtccttgccggaaggaaccatgaattggcattttcccttcttcctcgtggccaccg 139211722

                                                                             
Query: 267       tgacgctgccttccgtgtgctcccagttcaaccctctgtcgctggaggaactcggctccg 326
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139211721 tgacgctgccttccgtgtgctcccagttcaaccctctgtcgctggaggaactcggctccg 139211662

                                                                             
Query: 327       acacaggaatccaggttttcaatcagattgtcaagtcccggcctcatgacaacatcgtca 386
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 139211661 acacaggaatccaggttttcaatcagattgtcaagtcccggcctcatgacaacattgtca 139211602

                                                                             
Query: 387       tttccccccacgggattgcgtcggtgctggggatgctgcagctgggagctgacggcagga 446
                 ||||||||||||| ||||||||||| |||||||||||||||||||||||||| |||||||
Sbjct: 139211601 tttccccccacggaattgcgtcggtcctggggatgctgcagctgggagctgatggcagga 139211542

                                                            
Query: 447       ccaagaagcagcttaccacagtgatgagatacggcgtgaacgg 489
                 |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139211541 ccaagaagcagcttaccacagtgatgagatacggcgtgaacgg 139211499



 Score =  458 bits (231), Expect = e-126
 Identities = 231/231 (100%)
 Strand = Plus / Minus

                                                                             
Query: 488       ggagtcggtaaagtgttaaagaagatcaacaaggccatcgtctccaagaagaataaagat 547
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139208117 ggagtcggtaaagtgttaaagaagatcaacaaggccatcgtctccaagaagaataaagat 139208058

                                                                             
Query: 548       attgtgaccgtggccaacgccgtgtttgtgaagaatggcttcaaaatggaagtgcctttc 607
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139208057 attgtgaccgtggccaacgccgtgtttgtgaagaatggcttcaaaatggaagtgcctttc 139207998

                                                                             
Query: 608       gtcacgaggaacaaagacgtgtttcagtgtgaggtccggaacgcggactttgaggatcca 667
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139207997 gtcacgaggaacaaagacgtgtttcagtgtgaggtccggaacgcggactttgaggatcca 139207938

                                                                    
Query: 668       gcctctgcctgtgactccatcaacctgtgggttcgaaacgaaacccggggt 718
                 |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139207937 gcctctgcctgtgactccatcaacctgtgggttcgaaacgaaacccggggt 139207887



 Score =  400 bits (202), Expect = e-109
 Identities = 202/202 (100%)
 Strand = Plus / Minus

                                                                             
Query: 914       gggtctacgagcacccccagtgacttatggtacaacttcatcgagctgccctaccacggg 973
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139193640 gggtctacgagcacccccagtgacttatggtacaacttcatcgagctgccctaccacggg 139193581

                                                                             
Query: 974       gaaagcatcagcatgctgatcgcgctgcccacggagagctccacccccctctcagccatc 1033
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139193580 gaaagcatcagcatgctgatcgcgctgcccacggagagctccacccccctctcagccatc 139193521

                                                                             
Query: 1034      atccctcacatcagcaccaagaccatagacagctggatgagcaccatggtgcccaagagg 1093
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139193520 atccctcacatcagcaccaagaccatagacagctggatgagcaccatggtgcccaagagg 139193461

                                       
Query: 1094      gtgcaggtcatcctgcccaagt 1115
                 ||||||||||||||||||||||
Sbjct: 139193460 gtgcaggtcatcctgcccaagt 139193439



 Score =  396 bits (200), Expect = e-107
 Identities = 200/200 (100%)
 Strand = Plus / Minus

                                                                             
Query: 716       ggtatgatcgacagcctgctgtccccagatcttctcgacagtgtcctcaccagactggtt 775
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139201604 ggtatgatcgacagcctgctgtccccagatcttctcgacagtgtcctcaccagactggtt 139201545

                                                                             
Query: 776       ctggtcaatgcggtgtattttaagggtttgtggaaatcgaggtttcagccagagaacaca 835
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139201544 ctggtcaatgcggtgtattttaagggtttgtggaaatcgaggtttcagccagagaacaca 139201485

                                                                             
Query: 836       aagaagcgcacgtttgtggcagccgacggaaagtcctaccaagtgcccatgctggcccag 895
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139201484 aagaagcgcacgtttgtggcagccgacggaaagtcctaccaagtgcccatgctggcccag 139201425

                                     
Query: 896       ctctccgtgttccggtgtgg 915
                 ||||||||||||||||||||
Sbjct: 139201424 ctctccgtgttccggtgtgg 139201405



 Score =  194 bits (98), Expect = 9e-47
 Identities = 101/102 (99%)
 Strand = Plus / Minus

                                                                             
Query: 1114      gttcacagctgtagcacaaacagatttgaaggagcccctgaaggttcttggcgtcaccga 1173
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139190975 gttcacagctgtagcacaaacagatttgaaggagcccctgaaggttcttggcgtcaccga 139190916

                                                           
Query: 1174      gatgtttgatccatcaaaggcaaattttgccaaaataacaag 1215
                 |||||||||||||||||||||||||||||| |||||||||||
Sbjct: 139190915 gatgtttgatccatcaaaggcaaattttgcaaaaataacaag 139190874



 Score =  167 bits (84), Expect = 2e-38
 Identities = 90/92 (97%)
 Strand = Plus / Minus

                                                                             
Query: 1210      aacaagatcagaaaaccttcctgtttctcacatcttgcaaaaagcgaaaattgaagtcag 1269
                 |||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 139188699 aacaggatcagaaaaccttcatgtttctcacatcttgcaaaaagcgaaaattgaagtcag 139188640

                                                 
Query: 1270      cgaagacggaacgaaagcttccgcagcaacaa 1301
                 ||||||||||||||||||||||||||||||||
Sbjct: 139188639 cgaagacggaacgaaagcttccgcagcaacaa 139188608



 Score =  165 bits (83), Expect = 8e-38
 Identities = 83/83 (100%)
 Strand = Plus / Minus

                                                                             
Query: 1302      ctgcgattctgattgcaaggtcgtcgcctccctggtttatagtagacagaccttttctat 1361
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139186725 ctgcgattctgattgcaaggtcgtcgcctccctggtttatagtagacagaccttttctat 139186666

                                        
Query: 1362      ttttcatccgacataatcctaca 1384
                 |||||||||||||||||||||||
Sbjct: 139186665 ttttcatccgacataatcctaca 139186643



 Score =  157 bits (79), Expect = 2e-35
 Identities = 82/83 (98%)
 Strand = Plus / Minus

                                                                             
Query: 3         agcttgcgctgtagggctgccgggctgctggggctgtgcagcgtgtgcaggcgccgccgc 62
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139248957 agcttgcgctgtagggctgccgggctgctggggctgtgcagcgtgtgcaggcgccgccgc 139248898

                                        
Query: 63        ctctagcctccgctgtccttcct 85
                 |||||||||||||||||| ||||
Sbjct: 139248897 ctctagcctccgctgtccatcct 139248875


>Sscrofa_Chr01 
||          Length = 315321322

 Score = 77.8 bits (39), Expect = 1e-11
 Identities = 63/71 (88%)
 Strand = Plus / Minus

                                                                             
Query: 1184      ccatcaaaggcaaattttgccaaaataacaagatcagaaaaccttcctgtttctcacatc 1243
                 ||||||||| |||||| ||| |||| | |||| |||||||||||||  ||||||||||||
Sbjct: 156269800 ccatcaaagacaaattctgcaaaaacagcaaggtcagaaaaccttcaagtttctcacatc 156269741

                            
Query: 1244      ttgcaaaaagc 1254
                 |||||||||||
Sbjct: 156269740 ttgcaaaaagc 156269730


  Database: Sscrofa_10.2.fasta
    Posted date:  Nov 16, 2011 10:34 AM
  Number of letters in database: 2,808,509,378
  Number of sequences in database:  4582
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 34,198,618
Number of extensions: 185
Number of successful extensions: 185
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 185
Number of HSP's successfully gapped: 9
Length of query: 1406
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1385
Effective length of database: 2,808,413,156
Effective search space: 3889652221060
Effective search space used: 3889652221060
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)