Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-003145
(819 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001068760.1| protein transport protein Sec61 subunit beta... 131 8e-31
Alignment gi|NP_001033590.1| ATP synthase subunit b, mitochondrial precur... 87 2e-17
>ref|NP_001068760.1| protein transport protein Sec61 subunit beta [Bos taurus].
Length = 96
Score = 131 bits (329), Expect = 8e-31
Identities = 68/96 (70%), Positives = 68/96 (70%)
Frame = +2
Query: 104 MPGPTPSGTNVGSSGRSPSKAVAARAAGSTVRQRKNASCXXXXXXXXXXXXXXXMWRFYT 283
MPGP PSGTNVGSSGRSPSKAVAARAAGSTVRQRKNASC MWRFYT
Sbjct: 1 MPGPAPSGTNVGSSGRSPSKAVAARAAGSTVRQRKNASCGTRSAGRTTSAGTGGMWRFYT 60
Query: 284 EDSXXXXXXXXXXXXMSLLFIASVFMLHIWGKYTRS 391
EDS MSLLFIASVFMLHIWGKYTRS
Sbjct: 61 EDSPGLKVGPVPVLVMSLLFIASVFMLHIWGKYTRS 96
>ref|NP_001033590.1| ATP synthase subunit b, mitochondrial precursor [Bos taurus].
Length = 256
Score = 87.0 bits (214), Expect = 2e-17
Identities = 40/49 (81%), Positives = 44/49 (89%)
Frame = +3
Query: 672 KEIKNHLDYHISVQNMMRQKEQEHMIRWVEKHVVRSISSHYEKETIAKC 818
+E+KN LDYHISVQNMMRQKEQEHMI WVEK VV+SIS+ EKETIAKC
Sbjct: 191 REVKNRLDYHISVQNMMRQKEQEHMINWVEKRVVQSISAQQEKETIAKC 239
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 33,598,348
Number of extensions: 1010398
Number of successful extensions: 4449
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 4432
Number of HSP's successfully gapped: 2
Length of query: 273
Length of database: 17,681,374
Length adjustment: 101
Effective length of query: 172
Effective length of database: 14,339,486
Effective search space: 2466391592
Effective search space used: 2466391592
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 33 (17.3 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-003145
(819 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001003326.1| protein transport protein Sec61 subunit beta... 133 2e-31
Alignment gi|XP_537027.2| PREDICTED: similar to ATP synthase B chain, mit... 89 6e-18
>ref|NP_001003326.1| protein transport protein Sec61 subunit beta [Canis lupus
familiaris].
Length = 96
Score = 133 bits (334), Expect = 2e-31
Identities = 69/96 (71%), Positives = 69/96 (71%)
Frame = +2
Query: 104 MPGPTPSGTNVGSSGRSPSKAVAARAAGSTVRQRKNASCXXXXXXXXXXXXXXXMWRFYT 283
MPGPTPSGTNVGSSGRSPSKAVAARAAGSTVRQRKNASC MWRFYT
Sbjct: 1 MPGPTPSGTNVGSSGRSPSKAVAARAAGSTVRQRKNASCGTRSAGRTTSAGTGGMWRFYT 60
Query: 284 EDSXXXXXXXXXXXXMSLLFIASVFMLHIWGKYTRS 391
EDS MSLLFIASVFMLHIWGKYTRS
Sbjct: 61 EDSPGLKVGPVPVLVMSLLFIASVFMLHIWGKYTRS 96
>ref|XP_537027.2| PREDICTED: similar to ATP synthase B chain, mitochondrial precursor
[Canis familiaris].
Length = 256
Score = 88.6 bits (218), Expect = 6e-18
Identities = 40/49 (81%), Positives = 45/49 (91%)
Frame = +3
Query: 672 KEIKNHLDYHISVQNMMRQKEQEHMIRWVEKHVVRSISSHYEKETIAKC 818
+E+KN LDYHISVQNMMR+KEQEHMI WVEKHVV+SIS+ EKETIAKC
Sbjct: 191 REVKNRLDYHISVQNMMRRKEQEHMINWVEKHVVQSISAQQEKETIAKC 239
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 34,862,405
Number of extensions: 1030402
Number of successful extensions: 4515
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 4482
Number of HSP's successfully gapped: 2
Length of query: 273
Length of database: 18,874,504
Length adjustment: 101
Effective length of query: 172
Effective length of database: 15,507,568
Effective search space: 2667301696
Effective search space used: 2667301696
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-003145
(819 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_006799.1| protein transport protein Sec61 subunit beta [H... 133 2e-31
Alignment gi|NP_001679.2| ATP synthase subunit b, mitochondrial precursor... 90 3e-18
>ref|NP_006799.1| protein transport protein Sec61 subunit beta [Homo sapiens].
Length = 96
Score = 133 bits (334), Expect = 2e-31
Identities = 69/96 (71%), Positives = 69/96 (71%)
Frame = +2
Query: 104 MPGPTPSGTNVGSSGRSPSKAVAARAAGSTVRQRKNASCXXXXXXXXXXXXXXXMWRFYT 283
MPGPTPSGTNVGSSGRSPSKAVAARAAGSTVRQRKNASC MWRFYT
Sbjct: 1 MPGPTPSGTNVGSSGRSPSKAVAARAAGSTVRQRKNASCGTRSAGRTTSAGTGGMWRFYT 60
Query: 284 EDSXXXXXXXXXXXXMSLLFIASVFMLHIWGKYTRS 391
EDS MSLLFIASVFMLHIWGKYTRS
Sbjct: 61 EDSPGLKVGPVPVLVMSLLFIASVFMLHIWGKYTRS 96
>ref|NP_001679.2| ATP synthase subunit b, mitochondrial precursor [Homo sapiens].
Length = 256
Score = 89.7 bits (221), Expect = 3e-18
Identities = 41/49 (83%), Positives = 45/49 (91%)
Frame = +3
Query: 672 KEIKNHLDYHISVQNMMRQKEQEHMIRWVEKHVVRSISSHYEKETIAKC 818
KE+KN LDYHISVQNMMR+KEQEHMI WVEKHVV+SIS+ EKETIAKC
Sbjct: 191 KEVKNRLDYHISVQNMMRRKEQEHMINWVEKHVVQSISTQQEKETIAKC 239
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 34,275,113
Number of extensions: 1015996
Number of successful extensions: 4333
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 4308
Number of HSP's successfully gapped: 2
Length of query: 273
Length of database: 18,297,164
Length adjustment: 101
Effective length of query: 172
Effective length of database: 14,967,800
Effective search space: 2574461600
Effective search space used: 2574461600
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-003145
(819 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_077133.1| protein transport protein Sec61 subunit beta [M... 132 4e-31
Alignment gi|NP_033855.2| ATP synthase subunit b, mitochondrial precursor... 87 2e-17
>ref|NP_077133.1| protein transport protein Sec61 subunit beta [Mus musculus].
Length = 96
Score = 132 bits (331), Expect = 4e-31
Identities = 68/96 (70%), Positives = 69/96 (71%)
Frame = +2
Query: 104 MPGPTPSGTNVGSSGRSPSKAVAARAAGSTVRQRKNASCXXXXXXXXXXXXXXXMWRFYT 283
MPGPTPSGTNVGSSGRSPSKAVAARAAGSTVRQRKNASC MWRFYT
Sbjct: 1 MPGPTPSGTNVGSSGRSPSKAVAARAAGSTVRQRKNASCGTRSAGRTTSAGTGGMWRFYT 60
Query: 284 EDSXXXXXXXXXXXXMSLLFIASVFMLHIWGKYTRS 391
EDS MSLLFIA+VFMLHIWGKYTRS
Sbjct: 61 EDSPGLKVGPVPVLVMSLLFIAAVFMLHIWGKYTRS 96
>ref|NP_033855.2| ATP synthase subunit b, mitochondrial precursor [Mus musculus].
Length = 256
Score = 87.0 bits (214), Expect = 2e-17
Identities = 40/49 (81%), Positives = 44/49 (89%)
Frame = +3
Query: 672 KEIKNHLDYHISVQNMMRQKEQEHMIRWVEKHVVRSISSHYEKETIAKC 818
KE+KN LDYHISVQNMMR+KE+EHMI WVEKHVV+SIS EKETIAKC
Sbjct: 191 KEVKNRLDYHISVQNMMRRKEEEHMIDWVEKHVVKSISVQQEKETIAKC 239
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 29,240,300
Number of extensions: 862742
Number of successful extensions: 3671
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 3620
Number of HSP's successfully gapped: 2
Length of query: 273
Length of database: 15,617,559
Length adjustment: 100
Effective length of query: 173
Effective length of database: 12,613,959
Effective search space: 2182214907
Effective search space used: 2182214907
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 33 (17.3 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-003145
(819 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001230754.1| Sec61 beta subunit [Sus scrofa]. 133 1e-31
Alignment gi|XP_003355298.1| PREDICTED: ATP synthase subunit b, mitochond... 94 1e-19
Alignment gi|XP_003355292.1| PREDICTED: ATP synthase subunit b, mitochond... 94 1e-19
>ref|NP_001230754.1| Sec61 beta subunit [Sus scrofa].
Length = 96
Score = 133 bits (334), Expect = 1e-31
Identities = 69/96 (71%), Positives = 69/96 (71%)
Frame = +2
Query: 104 MPGPTPSGTNVGSSGRSPSKAVAARAAGSTVRQRKNASCXXXXXXXXXXXXXXXMWRFYT 283
MPGPTPSGTNVGSSGRSPSKAVAARAAGSTVRQRKNASC MWRFYT
Sbjct: 1 MPGPTPSGTNVGSSGRSPSKAVAARAAGSTVRQRKNASCGTRSAGRTTSAGTGGMWRFYT 60
Query: 284 EDSXXXXXXXXXXXXMSLLFIASVFMLHIWGKYTRS 391
EDS MSLLFIASVFMLHIWGKYTRS
Sbjct: 61 EDSPGLKVGPVPVLVMSLLFIASVFMLHIWGKYTRS 96
>ref|XP_003355298.1| PREDICTED: ATP synthase subunit b, mitochondrial-like [Sus scrofa].
Length = 256
Score = 93.6 bits (231), Expect = 1e-19
Identities = 44/49 (89%), Positives = 46/49 (93%)
Frame = +3
Query: 672 KEIKNHLDYHISVQNMMRQKEQEHMIRWVEKHVVRSISSHYEKETIAKC 818
KEIKN LDYHISVQNMMRQKEQEHMIRWVEKHVV+SIS+ EKETIAKC
Sbjct: 191 KEIKNRLDYHISVQNMMRQKEQEHMIRWVEKHVVQSISAQQEKETIAKC 239
>ref|XP_003355292.1| PREDICTED: ATP synthase subunit b, mitochondrial [Sus scrofa].
Length = 256
Score = 93.6 bits (231), Expect = 1e-19
Identities = 44/49 (89%), Positives = 46/49 (93%)
Frame = +3
Query: 672 KEIKNHLDYHISVQNMMRQKEQEHMIRWVEKHVVRSISSHYEKETIAKC 818
KEIKN LDYHISVQNMMRQKEQEHMIRWVEKHVV+SIS+ EKETIAKC
Sbjct: 191 KEIKNRLDYHISVQNMMRQKEQEHMIRWVEKHVVQSISAQQEKETIAKC 239
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 21,608,412
Number of extensions: 648222
Number of successful extensions: 2938
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 2919
Number of HSP's successfully gapped: 3
Length of query: 273
Length of database: 11,343,932
Length adjustment: 97
Effective length of query: 176
Effective length of database: 8,928,923
Effective search space: 1571490448
Effective search space used: 1571490448
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 33 (17.3 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-003145
(819 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr01 589 e-166
Sscrofa_Chr04 188 3e-45
Sscrofa_Chr13 58 8e-06
>Sscrofa_Chr01
|| Length = 315321322
Score = 589 bits (297), Expect = e-166
Identities = 343/366 (93%)
Strand = Plus / Plus
Query: 307 tggccctgttccagtattggttatgagtcttctgttcatcgcttctgtatttatgttgca 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269222397 tggccctgttccagtattggttatgagtcttctgttcatcgcttctgtatttatgttgca 269222456
Query: 367 catttggggcaagtacactcgttcatagattcggctacatccatctgtctgtcatctgaa 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269222457 catttggggcaagtacactcgttcatagattcggctacatccatctgtctgtcatctgaa 269222516
Query: 427 gaaggaaggnnnnnnncccaacatatcttggaccaaaaacatagtgattttctgtttatg 486
||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269222517 gaaggaaggaaaaaaacccaacatatcttggaccaaaaacatagtgattttctgtttatg 269222576
Query: 487 agaaaaattttctgtaagcttcctgttttacagggaacttaataagaaccgattttaagg 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269222577 agaaaaattttctgtaagcttcctgttttacagggaacttaataagaaccgattttaagg 269222636
Query: 547 aatcagnnnnnnnctatggctaataaactttttaattcatttataccaagnnnnnnnnnt 606
|||||| ||||||||||||||||||||||||||||||||||||| |
Sbjct: 269222637 aatcagtttttttctatggctaataaactttttaattcatttataccaagtctcattgct 269222696
Query: 607 gatgcctgactgctagggcccttattttctctgcctttagatttacaaataaatatgtag 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269222697 gatgcctgactgctagggcccttattttctctgcctttagatttacaaataaatatgtag 269222756
Query: 667 aaaaca 672
||||||
Sbjct: 269222757 aaaaca 269222762
Score = 208 bits (105), Expect = 3e-51
Identities = 105/105 (100%)
Strand = Plus / Plus
Query: 2 gggggcgggaccagaatcagtctctccggccgctggtctgttgagggctctaccgtttcc 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269216018 gggggcgggaccagaatcagtctctccggccgctggtctgttgagggctctaccgtttcc 269216077
Query: 62 ccgccatcaacttcagttgcctgcttctctccagtttccagcatg 106
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269216078 ccgccatcaacttcagttgcctgcttctctccagtttccagcatg 269216122
Score = 206 bits (104), Expect = 1e-50
Identities = 104/104 (100%)
Strand = Plus / Plus
Query: 203 aggaaaaatgccagctgtggaacaaggagcgcaggtcgcacaacctcagcaggcactggg 262
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269219155 aggaaaaatgccagctgtggaacaaggagcgcaggtcgcacaacctcagcaggcactggg 269219214
Query: 263 gggatgtggcgattctacacagaagattcaccagggctcaaagt 306
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269219215 gggatgtggcgattctacacagaagattcaccagggctcaaagt 269219258
Score = 198 bits (100), Expect = 3e-48
Identities = 100/100 (100%)
Strand = Plus / Plus
Query: 106 gcccggtccgacgcccagtggcaccaacgtgggctcctcaggacgctctcccagcaaagc 165
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269216313 gcccggtccgacgcccagtggcaccaacgtgggctcctcaggacgctctcccagcaaagc 269216372
Query: 166 agtggccgcccgggcggcaggatccacggtccggcagagg 205
||||||||||||||||||||||||||||||||||||||||
Sbjct: 269216373 agtggccgcccgggcggcaggatccacggtccggcagagg 269216412
>Sscrofa_Chr04
|| Length = 143465943
Score = 188 bits (95), Expect = 3e-45
Identities = 110/115 (95%)
Strand = Plus / Minus
Query: 670 acaaggagataaagaatcacctggactatcacatctctgtacaaaatatgatgcgtcaga 729
|||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||
Sbjct: 119081047 acaaggagataaagaatcgcctggactatcacatctctgtacagaatatgatgcgtcaga 119080988
Query: 730 aggaacaagagcacatgataagatgggtggaaaaacacgtggtgcggagcatctc 784
||||||||||||||||||||||||||||||| || |||||||||| |||||||||
Sbjct: 119080987 aggaacaagagcacatgataagatgggtggagaagcacgtggtgcagagcatctc 119080933
>Sscrofa_Chr13
|| Length = 218635234
Score = 58.0 bits (29), Expect = 8e-06
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 273 gattctacacagaagattcaccagggctcaaagttggccctgttccagtattggttatga 332
|||||||||||| || |||| |||||||||||||||| |||| |||||||||| |||
Sbjct: 60951078 gattctacacagtaggttcatgggggctcaaagttggcctggttctagtattggttctga 60951019
Query: 333 gtcttctgt 341
|| ||||||
Sbjct: 60951018 gttttctgt 60951010
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 25,512,022
Number of extensions: 188
Number of successful extensions: 188
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 186
Number of HSP's successfully gapped: 7
Length of query: 819
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 798
Effective length of database: 2,808,413,156
Effective search space: 2241113698488
Effective search space used: 2241113698488
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 29 (58.0 bits)