Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-003186
(1535 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001069526.1| lysosomal acid phosphatase precursor [Bos ta... 768 0.0
Alignment gi|NP_001092336.1| prostatic acid phosphatase precursor [Bos ta... 391 e-108
Alignment gi|NP_001193896.1| testicular acid phosphatase [Bos taurus]. 308 6e-84
Alignment gi|NP_001092843.1| lysophosphatidic acid phosphatase type 6 [Bo... 95 1e-19
Alignment gi|XP_001790670.1| PREDICTED: testicular acid phosphatase-like ... 74 5e-13
>ref|NP_001069526.1| lysosomal acid phosphatase precursor [Bos taurus].
Length = 423
Score = 768 bits (1984), Expect = 0.0
Identities = 369/423 (87%), Positives = 386/423 (91%)
Frame = +1
Query: 37 MAGRQFGWRQPAXXXXXXGVNLMVMPPIQARSLRFVTLLYRHGDRSPVKTYPKDPYQEDK 216
MAGR+FGW + A GVNLMVMP QAR+LRFVTLLYRHGDRSPVK YPKDP+QEDK
Sbjct: 1 MAGRRFGWSRAALLQLILGVNLMVMPRTQARTLRFVTLLYRHGDRSPVKAYPKDPHQEDK 60
Query: 217 WPQGFGQLTKEGMLQHWELGRALRQRYLGFLNTSYHRQEVYVRSTDFDRTLMSAEANLAG 396
WPQGFGQLTKEGMLQHWELG+ALRQRY GFLNTSYHRQEVYVRSTDFDRTLMSAEANLAG
Sbjct: 61 WPQGFGQLTKEGMLQHWELGQALRQRYHGFLNTSYHRQEVYVRSTDFDRTLMSAEANLAG 120
Query: 397 LFPPNGMQRFNPNISWQPIPVHTVPVTEDRLLKFPLGPCPRFEQLQNETRRTPEYQNESI 576
LFPP+G+QRFNPNISWQPIPVHTVPV EDRLLKFPLGPCPRFEQLQNETRR PEYQNES+
Sbjct: 121 LFPPDGIQRFNPNISWQPIPVHTVPVAEDRLLKFPLGPCPRFEQLQNETRRMPEYQNESV 180
Query: 577 QNAQFLEMVANETGLTDLTLETVWNVYDTLFCEQTHGLVLPPWASPQTMQRLSRLKDFSF 756
QNAQFL+MVANETGLTDL+LETVWNVYDTLFCEQTHGL LPPWASPQTMQRLSRLKDFSF
Sbjct: 181 QNAQFLDMVANETGLTDLSLETVWNVYDTLFCEQTHGLPLPPWASPQTMQRLSRLKDFSF 240
Query: 757 RFLFGIYEQAEKARLQGGVLLAQIRKNLTLMATTSQLPKLLVYSAHDTTLVALQMALDVY 936
RFLFGIY+QAEKARLQGGVLLAQIRKNLTLMATTSQLPKLLVYSAHDTTLVAL MAL VY
Sbjct: 241 RFLFGIYKQAEKARLQGGVLLAQIRKNLTLMATTSQLPKLLVYSAHDTTLVALHMALGVY 300
Query: 937 NGEQAPYAACHIFELYQEDNGNFSVEMYFRNESDKAPWPLILPGCPHRCPLQDFLRLTEP 1116
NGEQAPYA+CH+FELYQED+GNFSVEMYFRNES +APWPL LPGC HRCPLQDFLRLTEP
Sbjct: 301 NGEQAPYASCHMFELYQEDSGNFSVEMYFRNESHRAPWPLTLPGCSHRCPLQDFLRLTEP 360
Query: 1117 VIPKDWQQECQLASGPADTEVIVALAVCGSXXXXXXXXXXXXXXRMQAQPPGYRHVADGE 1296
V+PKDW QECQLA GPADTEVIVALAVCGS R+QAQPPGYRHV DGE
Sbjct: 361 VVPKDWLQECQLAGGPADTEVIVALAVCGSILFLLIVLLLTVLFRVQAQPPGYRHVPDGE 420
Query: 1297 DHA 1305
DHA
Sbjct: 421 DHA 423
>ref|NP_001092336.1| prostatic acid phosphatase precursor [Bos taurus].
Length = 387
Score = 391 bits (1004), Expect = e-108
Identities = 187/356 (52%), Positives = 247/356 (69%), Gaps = 1/356 (0%)
Frame = +1
Query: 118 IQARSLRFVTLLYRHGDRSPVKTYPKDPYQEDKWPQGFGQLTKEGMLQHWELGRALRQRY 297
++A+ LRFVTL++RHGDRSP++T+P DP +E WPQGFGQLT+ GM QH+ELG+ +R+RY
Sbjct: 32 VRAKELRFVTLVFRHGDRSPIETFPNDPIKESSWPQGFGQLTQLGMAQHYELGQYIRKRY 91
Query: 298 LGFLNTSYHRQEVYVRSTDFDRTLMSAEANLAGLFPPNGMQRFNPNISWQPIPVHTVPVT 477
FLN SY R++V+VRSTD DRTLMSA NLA LFPP G+ +NP++ WQPIPVHTVPV+
Sbjct: 92 ENFLNESYKREQVHVRSTDIDRTLMSAMTNLAALFPPEGISIWNPSLPWQPIPVHTVPVS 151
Query: 478 EDRLLKFPLGPCPRFEQLQNETRRTPEYQNESIQNAQFLEMVANETGLTDLTLETVWN-V 654
ED+LL P CPRF++LQ+ET + E+Q F+E++ TG D L +W+ V
Sbjct: 152 EDQLLYLPFRNCPRFQELQSETLISEEFQKRLQPYKDFIEVLPKLTGYHDQDLLGIWSKV 211
Query: 655 YDTLFCEQTHGLVLPPWASPQTMQRLSRLKDFSFRFLFGIYEQAEKARLQGGVLLAQIRK 834
YD LFCE H LP WA+ TM +L + + S L+GI++Q EK+RLQGGVL+ +I
Sbjct: 212 YDPLFCEGVHNFTLPSWATEDTMTKLKEISELSLLSLYGIHKQKEKSRLQGGVLINEILN 271
Query: 835 NLTLMATTSQLPKLLVYSAHDTTLVALQMALDVYNGEQAPYAACHIFELYQEDNGNFSVE 1014
++ S KL++YSAHDTT+ LQMALDVYNG PYA+CH+ ELY +D G + VE
Sbjct: 272 HMKSATQPSNRRKLIMYSAHDTTVSGLQMALDVYNGILPPYASCHMMELYFQD-GEYFVE 330
Query: 1015 MYFRNESDKAPWPLILPGCPHRCPLQDFLRLTEPVIPKDWQQECQLASGPADTEVI 1182
MY+RNE+ P PL LPGC CPL F+ L PVI +DW EC + + ++I
Sbjct: 331 MYYRNETRYEPHPLTLPGCTPSCPLAKFVELVAPVISQDWSMECAIRNHKGTEDII 386
>ref|NP_001193896.1| testicular acid phosphatase [Bos taurus].
Length = 431
Score = 308 bits (790), Expect = 6e-84
Identities = 170/386 (44%), Positives = 226/386 (58%), Gaps = 17/386 (4%)
Frame = +1
Query: 100 LMVMPPIQARSLRFVTLLYRHGDRSPVKTYPKDPYQE---DKWPQGFGQLTKEGMLQHWE 270
L++ P + L FV +++RHGDR+P+ +YP DP++E WP+G GQLT+EG+ Q E
Sbjct: 20 LLLPPALTEGPLVFVAVVFRHGDRAPLASYPTDPHKEVASTLWPRGLGQLTEEGVRQQLE 79
Query: 271 LGRALRQRYLGFLNTSYHRQEVYVRSTDFDRTLMSAEANLAGLFPPNGMQRFNPNISWQP 450
LGR LR RY FL+ Y R+EVY+RSTDFDRTL SA+ANLAGLFP R +W+P
Sbjct: 80 LGRFLRSRYEDFLSPEYRREEVYIRSTDFDRTLESAQANLAGLFPEAAPGR--SEATWRP 137
Query: 451 IPVHTVPVTEDRLLKFPLGPCPRFEQLQNETRRTPEYQNESIQNAQFLEMVANETGLTDL 630
IPVHTVPVTED+LL+FP CPR+ +L E EY+ FL + N TGL +
Sbjct: 138 IPVHTVPVTEDKLLRFPTRSCPRYRELLREATEAAEYKTALKGWTDFLTRLENFTGLPLV 197
Query: 631 --TLETVWNVYDTLFCEQTHGLVLPPWASPQTMQRLSRLKDFSFRFLFGIYEQAEKARLQ 804
L W V DTL C+Q HGL LP WASP +Q L+++ G + AEKA+L
Sbjct: 198 GEPLRKAWKVLDTLICQQAHGLSLPSWASPDVLQTLAQISALDIGAHVGPPQAAEKAQLS 257
Query: 805 GGVLLAQIRKNLTLMATTSQLPKLLVYSAHDTTLVALQMALDVYNGEQAPYAACHIFELY 984
GG+LL I N + + K+++YSAHD+TL+ALQ AL +Y+G PYAAC FE
Sbjct: 258 GGILLDAILANFSRVQRLGLPLKMVMYSAHDSTLLALQGALGLYDGHTPPYAACLGFEFR 317
Query: 985 Q------------EDNGNFSVEMYFRNESDKAPWPLILPGCPHRCPLQDFLRLTEPVIPK 1128
+ + +GN +V +++RN+S P L LPGCP CPL F +LT P P
Sbjct: 318 RRLGDADRDNADGDHSGNVTVSLFYRNDSAGLPLTLRLPGCPAPCPLSRFRQLTAPARPP 377
Query: 1129 DWQQECQLASGPADTEVIVALAVCGS 1206
C + PA V + G+
Sbjct: 378 AHGIPCHGSHEPATPAATVVPLLAGA 403
>ref|NP_001092843.1| lysophosphatidic acid phosphatase type 6 [Bos taurus].
Length = 429
Score = 95.1 bits (235), Expect = 1e-19
Identities = 101/375 (26%), Positives = 155/375 (41%), Gaps = 52/375 (13%)
Frame = +1
Query: 133 LRFVTLLYRHGDRSPVKTYPKDPYQED--------------------------------- 213
L+ V +++RHG RSP+K P++ Q +
Sbjct: 50 LKMVQVVFRHGARSPLKPLPQEDQQVEWKSQLLEVPPQTQLEYTVTNLAGGPKPHSPFDS 109
Query: 214 -------KWPQGFGQLTKEGMLQHWELGRALRQRY---LGFLNTSYHRQEVYVRSTDFDR 363
K GQLTK GM Q + LG LR+ Y + FL+ +++ EV++RST+ R
Sbjct: 110 QYHETTLKGGMFAGQLTKVGMEQMFALGERLRKNYVEDIPFLSPTFNPLEVFIRSTNIYR 169
Query: 364 TLMSAEANLAGLFPPNGMQRFNPNISWQPIPVHTVPVTEDRLLKFPLGPCPRFEQLQNET 543
L S LAGLF QR PI +HT + + L P ++ N
Sbjct: 170 NLESTRCLLAGLF-----QRQKEG----PIVIHTDEASSEVLY-------PNYQYCWNLQ 213
Query: 544 RRTP-EYQNESIQN--AQFLEMVANETGLTDLTLETVWNVYDTLFCEQTHGLVLPPWASP 714
+RT Q S+Q ++ L+ V G+ + D + EQ H L P
Sbjct: 214 KRTRGRRQAASLQPGISEDLKKVKEGMGIASSDEVDFLVLLDNMAAEQVHSLPSCPTLKR 273
Query: 715 QTMQRLSRLKDFSFRFLFGIYEQAEKARLQGGVLLAQIRKNLTLMATTSQLP----KLLV 882
R D + L +E E ++ G L + NL + + P KL +
Sbjct: 274 FAWMIEQRAVDTALYILQ--WEDREGLQMAVGPFLHILESNLLKVVDPATPPSKTRKLYL 331
Query: 883 YSAHDTTLVALQMALDVYNGEQAPYAACHIFELYQ-EDNGNFSVEMYFRNESDKAPWPLI 1059
Y+AHD TL+ L M L +++ + P+A ELYQ ++ + V++Y+R + +
Sbjct: 332 YAAHDVTLMPLLMTLGIFDHKWPPFAVDLTMELYQHRESKEWFVQLYYRGKEQ------V 385
Query: 1060 LPGCPH-RCPLQDFL 1101
GCP CPL FL
Sbjct: 386 PKGCPDGLCPLDKFL 400
>ref|XP_001790670.1| PREDICTED: testicular acid phosphatase-like [Bos taurus].
Length = 171
Score = 73.6 bits (179), Expect = 5e-13
Identities = 48/143 (33%), Positives = 65/143 (45%), Gaps = 32/143 (22%)
Frame = +1
Query: 874 LLVYSAHDTTLVALQMALDVYNGEQAPYAACHIFELYQ------EDNG------------ 999
+++YSAHD+TL+ALQ AL +Y+G PYAAC FE + DN
Sbjct: 1 MVMYSAHDSTLLALQGALGLYDGHTPPYAACLGFEFRRRLGDADRDNADGDHSGFKVSGR 60
Query: 1000 --------------NFSVEMYFRNESDKAPWPLILPGCPHRCPLQDFLRLTEPVIPKDWQ 1137
N +V +++RN+S P L LPGCP CPL F +LT P P
Sbjct: 61 EGEDGPRYLLSSSRNVTVSLFYRNDSAGLPLTLRLPGCPAPCPLSRFRQLTAPARPPAHG 120
Query: 1138 QECQLASGPADTEVIVALAVCGS 1206
C + PA V + G+
Sbjct: 121 IPCHGSHEPATPAATVVPLLAGA 143
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 63,857,904
Number of extensions: 1871651
Number of successful extensions: 6725
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 6698
Number of HSP's successfully gapped: 5
Length of query: 511
Length of database: 17,681,374
Length adjustment: 107
Effective length of query: 404
Effective length of database: 14,140,958
Effective search space: 5712947032
Effective search space used: 5712947032
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-003186
(1535 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_850233.1| PREDICTED: similar to Lysosomal acid phosphatas... 788 0.0
Alignment gi|XP_861048.1| PREDICTED: similar to Lysosomal acid phosphatas... 755 0.0
Alignment gi|XP_533190.2| PREDICTED: similar to Lysosomal acid phosphatas... 402 e-112
Alignment gi|XP_542782.2| PREDICTED: similar to acid phosphatase, prostat... 391 e-108
Alignment gi|XP_541473.2| PREDICTED: similar to testicular acid phosphata... 321 1e-87
Alignment gi|XP_533030.2| PREDICTED: similar to acid phosphatase 6, lysop... 102 1e-21
Alignment gi|XP_854027.1| PREDICTED: similar to acid phosphatase-like 2 [... 60 4e-09
>ref|XP_850233.1| PREDICTED: similar to Lysosomal acid phosphatase precursor (LAP)
isoform 2 [Canis familiaris].
Length = 423
Score = 788 bits (2035), Expect = 0.0
Identities = 378/423 (89%), Positives = 392/423 (92%)
Frame = +1
Query: 37 MAGRQFGWRQPAXXXXXXGVNLMVMPPIQARSLRFVTLLYRHGDRSPVKTYPKDPYQEDK 216
MAG F W A G NL+V+PP QARSLRFVTLLYRHGDRSPVKTYPKDPYQED+
Sbjct: 1 MAGGPFAWSGAALLQLLLGANLLVVPPTQARSLRFVTLLYRHGDRSPVKTYPKDPYQEDE 60
Query: 217 WPQGFGQLTKEGMLQHWELGRALRQRYLGFLNTSYHRQEVYVRSTDFDRTLMSAEANLAG 396
WPQGFGQLTKEGMLQHWELG+ALRQRY GFLNTSYHRQEVYVRSTDFDRTLMSAEANLAG
Sbjct: 61 WPQGFGQLTKEGMLQHWELGQALRQRYHGFLNTSYHRQEVYVRSTDFDRTLMSAEANLAG 120
Query: 397 LFPPNGMQRFNPNISWQPIPVHTVPVTEDRLLKFPLGPCPRFEQLQNETRRTPEYQNESI 576
LFPPNGMQRFNPNISWQPIPVHTVP+TEDRLLKFPLGPCPR+EQLQNETR+TPEYQNES+
Sbjct: 121 LFPPNGMQRFNPNISWQPIPVHTVPITEDRLLKFPLGPCPRYEQLQNETRQTPEYQNESV 180
Query: 577 QNAQFLEMVANETGLTDLTLETVWNVYDTLFCEQTHGLVLPPWASPQTMQRLSRLKDFSF 756
QNAQFL+MVANETGLTD+TLETVWNVYDTLFCEQTHGLVLPPWASPQTMQRLSRLKDFSF
Sbjct: 181 QNAQFLDMVANETGLTDVTLETVWNVYDTLFCEQTHGLVLPPWASPQTMQRLSRLKDFSF 240
Query: 757 RFLFGIYEQAEKARLQGGVLLAQIRKNLTLMATTSQLPKLLVYSAHDTTLVALQMALDVY 936
RFLFGIYEQAEKARLQGGVLLAQIRKNLTLMAT+SQLPKLLVYSAHDTTLVALQMALDVY
Sbjct: 241 RFLFGIYEQAEKARLQGGVLLAQIRKNLTLMATSSQLPKLLVYSAHDTTLVALQMALDVY 300
Query: 937 NGEQAPYAACHIFELYQEDNGNFSVEMYFRNESDKAPWPLILPGCPHRCPLQDFLRLTEP 1116
NGEQAPYA+CHIFELYQEDNGNFSVEMYFRNES+KAPWPLILPGC HRCPLQDFL LTEP
Sbjct: 301 NGEQAPYASCHIFELYQEDNGNFSVEMYFRNESNKAPWPLILPGCLHRCPLQDFLHLTEP 360
Query: 1117 VIPKDWQQECQLASGPADTEVIVALAVCGSXXXXXXXXXXXXXXRMQAQPPGYRHVADGE 1296
V+PKDWQQECQLASGPADTEVIVALAVCGS RMQAQPPGYRHVADGE
Sbjct: 361 VVPKDWQQECQLASGPADTEVIVALAVCGSILFLLIVLLLTVLFRMQAQPPGYRHVADGE 420
Query: 1297 DHA 1305
DHA
Sbjct: 421 DHA 423
>ref|XP_861048.1| PREDICTED: similar to Lysosomal acid phosphatase precursor (LAP)
isoform 3 [Canis familiaris].
Length = 396
Score = 755 bits (1949), Expect = 0.0
Identities = 365/423 (86%), Positives = 379/423 (89%)
Frame = +1
Query: 37 MAGRQFGWRQPAXXXXXXGVNLMVMPPIQARSLRFVTLLYRHGDRSPVKTYPKDPYQEDK 216
MAG F W A G NL+V+PP QARSLRFVTLLYRHGDRSPVKTYPKDPYQED+
Sbjct: 1 MAGGPFAWSGAALLQLLLGANLLVVPPTQARSLRFVTLLYRHGDRSPVKTYPKDPYQEDE 60
Query: 217 WPQGFGQLTKEGMLQHWELGRALRQRYLGFLNTSYHRQEVYVRSTDFDRTLMSAEANLAG 396
WPQGFGQLTKEGMLQHWELG+ALRQRY GFLNTSYHRQEVYVRSTDFDRTLMSAEANLAG
Sbjct: 61 WPQGFGQLTKEGMLQHWELGQALRQRYHGFLNTSYHRQEVYVRSTDFDRTLMSAEANLAG 120
Query: 397 LFPPNGMQRFNPNISWQPIPVHTVPVTEDRLLKFPLGPCPRFEQLQNETRRTPEYQNESI 576
LFPPNGMQRFNPNISWQPIPVHTVP+TEDRLLKFPLGPCPR+EQLQNETR+TPEYQNES+
Sbjct: 121 LFPPNGMQRFNPNISWQPIPVHTVPITEDRLLKFPLGPCPRYEQLQNETRQTPEYQNESV 180
Query: 577 QNAQFLEMVANETGLTDLTLETVWNVYDTLFCEQTHGLVLPPWASPQTMQRLSRLKDFSF 756
QNAQFL+MVANETGLTD+TLETVWNVYDTLFCEQTHGLVLPPWASPQTMQRLSRLKDFSF
Sbjct: 181 QNAQFLDMVANETGLTDVTLETVWNVYDTLFCEQTHGLVLPPWASPQTMQRLSRLKDFSF 240
Query: 757 RFLFGIYEQAEKARLQGGVLLAQIRKNLTLMATTSQLPKLLVYSAHDTTLVALQMALDVY 936
RFLFGIYEQAEKARLQGGVLLAQIRKNLTLMAT+SQLPKLLVYSAHDTTLVALQMALDVY
Sbjct: 241 RFLFGIYEQAEKARLQGGVLLAQIRKNLTLMATSSQLPKLLVYSAHDTTLVALQMALDVY 300
Query: 937 NGEQAPYAACHIFELYQEDNGNFSVEMYFRNESDKAPWPLILPGCPHRCPLQDFLRLTEP 1116
NGEQAPYA+CHIFELYQEDNGNFSVEMYFRNES+KAPWPLILPGC HRCPLQDFL LTEP
Sbjct: 301 NGEQAPYASCHIFELYQEDNGNFSVEMYFRNESNKAPWPLILPGCLHRCPLQDFLHLTEP 360
Query: 1117 VIPKDWQQECQLASGPADTEVIVALAVCGSXXXXXXXXXXXXXXRMQAQPPGYRHVADGE 1296
V+PKDWQQECQLASGPADTE AQPPGYRHVADGE
Sbjct: 361 VVPKDWQQECQLASGPADTE---------------------------AQPPGYRHVADGE 393
Query: 1297 DHA 1305
DHA
Sbjct: 394 DHA 396
>ref|XP_533190.2| PREDICTED: similar to Lysosomal acid phosphatase precursor (LAP)
isoform 1 [Canis familiaris].
Length = 223
Score = 402 bits (1034), Expect = e-112
Identities = 188/214 (87%), Positives = 199/214 (92%)
Frame = +1
Query: 37 MAGRQFGWRQPAXXXXXXGVNLMVMPPIQARSLRFVTLLYRHGDRSPVKTYPKDPYQEDK 216
MAG F W A G NL+V+PP QARSLRFVTLLYRHGDRSPVKTYPKDPYQED+
Sbjct: 1 MAGGPFAWSGAALLQLLLGANLLVVPPTQARSLRFVTLLYRHGDRSPVKTYPKDPYQEDE 60
Query: 217 WPQGFGQLTKEGMLQHWELGRALRQRYLGFLNTSYHRQEVYVRSTDFDRTLMSAEANLAG 396
WPQGFGQLTKEGMLQHWELG+ALRQRY GFLNTSYHRQEVYVRSTDFDRTLMSAEANLAG
Sbjct: 61 WPQGFGQLTKEGMLQHWELGQALRQRYHGFLNTSYHRQEVYVRSTDFDRTLMSAEANLAG 120
Query: 397 LFPPNGMQRFNPNISWQPIPVHTVPVTEDRLLKFPLGPCPRFEQLQNETRRTPEYQNESI 576
LFPPNGMQRFNPNISWQPIPVHTVP+TEDRLLKFPLGPCPR+EQLQNETR+TPEYQNES+
Sbjct: 121 LFPPNGMQRFNPNISWQPIPVHTVPITEDRLLKFPLGPCPRYEQLQNETRQTPEYQNESV 180
Query: 577 QNAQFLEMVANETGLTDLTLETVWNVYDTLFCEQ 678
QNAQFL+MVANETGLTD+TLETVWNVYDTLFCE+
Sbjct: 181 QNAQFLDMVANETGLTDVTLETVWNVYDTLFCEE 214
>ref|XP_542782.2| PREDICTED: similar to acid phosphatase, prostate isoform 1 [Canis
familiaris].
Length = 624
Score = 391 bits (1004), Expect = e-108
Identities = 187/360 (51%), Positives = 246/360 (68%), Gaps = 1/360 (0%)
Frame = +1
Query: 124 ARSLRFVTLLYRHGDRSPVKTYPKDPYQEDKWPQGFGQLTKEGMLQHWELGRALRQRYLG 303
A+ L+FVTL++RHGDRSP++T+P DP +E WPQGFGQLT+ GM QH+ELG+ +++RY
Sbjct: 238 AKELKFVTLVFRHGDRSPIETFPNDPIKEASWPQGFGQLTQLGMEQHYELGQYIKKRYGK 297
Query: 304 FLNTSYHRQEVYVRSTDFDRTLMSAEANLAGLFPPNGMQRFNPNISWQPIPVHTVPVTED 483
FLN SY R++VY++STD DRTLMSA NLAGLFPP G+ +NP++ WQPIPVHT+ ++ED
Sbjct: 298 FLNESYKREQVYIQSTDVDRTLMSAMTNLAGLFPPEGISIWNPSLPWQPIPVHTLSLSED 357
Query: 484 RLLKFPLGPCPRFEQLQNETRRTPEYQNESIQNAQFLEMVANETGLTDLTLETVW-NVYD 660
RLL P CPRF++L ET ++ E+Q F+E + TG L +W VYD
Sbjct: 358 RLLYLPFRDCPRFKELTEETLKSEEFQKRLHPYKDFIETLPTLTGYHTQDLFGMWTKVYD 417
Query: 661 TLFCEQTHGLVLPPWASPQTMQRLSRLKDFSFRFLFGIYEQAEKARLQGGVLLAQIRKNL 840
LFCE H LP WA+ TM +L L + S ++GI++Q EK+RLQGGVL+++I ++
Sbjct: 418 PLFCESVHNFTLPSWATEDTMTKLKELSELSILSIYGIHKQKEKSRLQGGVLVSEILNHM 477
Query: 841 TLMATTSQLPKLLVYSAHDTTLVALQMALDVYNGEQAPYAACHIFELYQEDNGNFSVEMY 1020
+ S KL++YSAHDTT+ LQMALDVYNG PYA+CHI ELY E G + VEMY
Sbjct: 478 KIATQPSNHRKLIMYSAHDTTVSGLQMALDVYNGILPPYASCHIMELYLE-KGEYFVEMY 536
Query: 1021 FRNESDKAPWPLILPGCPHRCPLQDFLRLTEPVIPKDWQQECQLASGPADTEVIVALAVC 1200
+RNE+ P+PL LPGC CPL +F L PVIP+DW EC S V +A+A C
Sbjct: 537 YRNETQHEPYPLTLPGCTPSCPLTEFAELVAPVIPQDWSTECMTTSNDQVLRVYLAVAFC 596
>ref|XP_541473.2| PREDICTED: similar to testicular acid phosphatase isoform a precursor
[Canis familiaris].
Length = 427
Score = 321 bits (822), Expect = 1e-87
Identities = 177/383 (46%), Positives = 231/383 (60%), Gaps = 14/383 (3%)
Frame = +1
Query: 100 LMVMPPIQARS---LRFVTLLYRHGDRSPVKTYPKDPYQED---KWPQGFGQLTKEGMLQ 261
L++ PP QA + L FV +++RHGDR+P+ +YP DP++E WP+G GQLT EG+ Q
Sbjct: 19 LLLPPPPQALTEGPLVFVAVVFRHGDRAPLASYPTDPHKEAITALWPRGLGQLTTEGVRQ 78
Query: 262 HWELGRALRQRYLGFLNTSYHRQEVYVRSTDFDRTLMSAEANLAGLFPPNGMQRFNPNIS 441
ELGR LR RY FL+ Y R+EVYVRSTDFDRTL SA+ANLAGLFP R P +
Sbjct: 79 QLELGRFLRSRYEAFLSPEYRREEVYVRSTDFDRTLESAQANLAGLFPEAAPGR--PEAA 136
Query: 442 WQPIPVHTVPVTEDRLLKFPLGPCPRFEQLQNETRRTPEYQNESIQNAQFLEMVANETGL 621
W+PIPVHTVPVTED+LL+FP CPR+ +L E EYQ FL + N TGL
Sbjct: 137 WRPIPVHTVPVTEDKLLRFPTRSCPRYHELLREATEATEYQTALEGWTDFLTHLENYTGL 196
Query: 622 TDL--TLETVWNVYDTLFCEQTHGLVLPPWASPQTMQRLSRLKDFSFRFLFGIYEQAEKA 795
+ + L W V DTL C+Q HGL LP WASP ++ L+++ G AEKA
Sbjct: 197 SLVGEPLRRAWKVLDTLMCQQAHGLPLPSWASPNVLRTLAQISALDIGAHVGPPRAAEKA 256
Query: 796 RLQGGVLLAQIRKNLTLMATTSQLPKLLVYSAHDTTLVALQMALDVYNGEQAPYAACHIF 975
+L GG+LL I N + + + K+++YSAHD+TL+ALQ AL +Y+G PYAAC F
Sbjct: 257 QLTGGILLDAILANFSRVQRLALPLKMVMYSAHDSTLLALQGALGLYDGHTPPYAACLGF 316
Query: 976 ELYQ------EDNGNFSVEMYFRNESDKAPWPLILPGCPHRCPLQDFLRLTEPVIPKDWQ 1137
E + ED GN ++ +++RN+S P PL LPGCP CPL F +LT P P
Sbjct: 317 EFRRRLGDPDEDAGNITISLFYRNDSTGLPLPLSLPGCPGACPLGRFRQLTAPARPPAHG 376
Query: 1138 QECQLASGPADTEVIVALAVCGS 1206
C + PA V + G+
Sbjct: 377 VPCHGSHEPATPAATVVPLLAGA 399
>ref|XP_533030.2| PREDICTED: similar to acid phosphatase 6, lysophosphatidic [Canis
familiaris].
Length = 427
Score = 102 bits (254), Expect = 1e-21
Identities = 101/374 (27%), Positives = 157/374 (41%), Gaps = 51/374 (13%)
Frame = +1
Query: 133 LRFVTLLYRHGDRSPVKTYPK-------------------------------------DP 201
L+ V +++RHG RSP+K P+
Sbjct: 50 LKMVQVVFRHGARSPLKPLPQKQQAEWNLQLLEVPPHTQFDYTITNLAGGPKPHSPFDSQ 109
Query: 202 YQEDKWPQGF--GQLTKEGMLQHWELGRALRQRY---LGFLNTSYHRQEVYVRSTDFDRT 366
Y+E K G GQLT GM Q + LG LR+ Y + FL+ +++ EV+VRST+ R
Sbjct: 110 YRETKLKGGMFAGQLTNVGMQQMFALGERLRKNYVEDIPFLSPTFNPLEVFVRSTNIYRN 169
Query: 367 LMSAEANLAGLFPPNGMQRFNPNISWQPIPVHTVPVTEDRLLKFPLGPCPRFEQ---LQN 537
L S LAGLF PI +HT + + L P ++ LQ
Sbjct: 170 LESTRCLLAGLFQCQ---------KEGPIIIHTDEASSEVLY-------PNYQNCWNLQE 213
Query: 538 ETRRTPEYQNESIQNAQFLEMVANETGLTDLTLETVWNVYDTLFCEQTHGLVLPPWASPQ 717
TR + + ++ L+ V G+T +++ D + EQ H L+ P
Sbjct: 214 RTRGRRKAASLQPGISEDLQKVKEGMGITSNDGVDFFSLLDNVAAEQVHSLLSCPTLKRF 273
Query: 718 TMQRLSRLKDFSFRFLFGIYEQAEKARLQGGVLLAQIRKNLTLMATTSQLP----KLLVY 885
R D + + G E E ++ G L + NL + + P KL +Y
Sbjct: 274 ARMIEQRAVDTALYVIQG--EDRESLQMAVGPFLHILESNLLKVVDPATPPDKTRKLYLY 331
Query: 886 SAHDTTLVALQMALDVYNGEQAPYAACHIFELYQ-EDNGNFSVEMYFRNESDKAPWPLIL 1062
+AHD TL+ L + L +++ + P+A ELYQ +++ + V++Y+R E +
Sbjct: 332 AAHDVTLMPLLITLGIFDHKWPPFAVDLTMELYQHQESKEWFVQLYYRGEEQ------VP 385
Query: 1063 PGCPHR-CPLQDFL 1101
GCP R CPL FL
Sbjct: 386 KGCPDRLCPLDKFL 399
>ref|XP_854027.1| PREDICTED: similar to acid phosphatase-like 2 [Canis familiaris].
Length = 481
Score = 60.5 bits (145), Expect = 4e-09
Identities = 73/280 (26%), Positives = 113/280 (40%), Gaps = 12/280 (4%)
Frame = +1
Query: 187 YPKDPYQEDKWPQGFGQLTKEGMLQHWELGRALRQRYLG---FLNTSYHRQEVYVRSTDF 357
YP P E G+LT+ G++QH + G+ LR YL L + ++Y+ +T
Sbjct: 154 YPNHPLCE------MGELTQTGVVQHLQNGQLLRDIYLKKHKLLPNDWSTDQLYLETTGK 207
Query: 358 DRTLMSAEANLAGLFPPNGMQRFNPNISWQPIPVHTVPVTEDRLLKFPLGPC---PRFEQ 528
RTL S A L G F P+ W+ I P F G C R +
Sbjct: 208 SRTLQSGLALLYG---------FLPDFDWKKIHFRHQPSA-----LFCSGNCYCPVRNQY 253
Query: 529 LQNETRRTPEYQNESIQNAQFLEMVANETGLTDLTLETVWNVYDTLFCEQTHGLVLPPWA 708
L+ E RR + ++ Q + E +A + L N D++ C H + P
Sbjct: 254 LEKEQRRQYLLRLKNSQLERTYEDMARIVDVPTKQLRAA-NPIDSMLCHFCHNVSFP--C 310
Query: 709 SPQTMQRLSRLKDFSFRFLFGIYEQAEKARLQGGVLLAQ---IRKNLTLMATTSQLPK-- 873
+ + K + E+ EK G LL + + ++ M T++ K
Sbjct: 311 TRNGCIDMEHFKVIKTHQIEDERERREKKLYLGYALLGAHPILNQTISRMQRTAEGRKEE 370
Query: 874 -LLVYSAHDTTLVALQMALDVYNGEQAPYAACHIFELYQE 990
+YSAHD TL + AL + +AA IFEL+Q+
Sbjct: 371 VFALYSAHDVTLSPVLSALGLMEARFPRFAARLIFELWQD 410
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 66,381,411
Number of extensions: 1919102
Number of successful extensions: 7022
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 6983
Number of HSP's successfully gapped: 8
Length of query: 511
Length of database: 18,874,504
Length adjustment: 107
Effective length of query: 404
Effective length of database: 15,307,552
Effective search space: 6184251008
Effective search space used: 6184251008
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-003186
(1535 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001601.1| lysosomal acid phosphatase isoform 1 precursor ... 789 0.0
Alignment gi|NP_001127666.1| prostatic acid phosphatase isoform TM-PAP pr... 385 e-107
Alignment gi|NP_001090.2| prostatic acid phosphatase isoform PAP precurso... 381 e-105
Alignment gi|NP_149059.1| testicular acid phosphatase precursor [Homo sap... 317 1e-86
Alignment gi|NP_001124536.1| lysosomal acid phosphatase isoform 2 [Homo s... 280 3e-75
Alignment gi|NP_057445.3| lysophosphatidic acid phosphatase type 6 precur... 93 6e-19
Alignment gi|NP_001032249.1| acid phosphatase-like protein 2 precursor [H... 57 6e-08
Alignment gi|NP_689495.1| acid phosphatase-like protein 2 precursor [Homo... 57 6e-08
>ref|NP_001601.1| lysosomal acid phosphatase isoform 1 precursor [Homo sapiens].
Length = 423
Score = 789 bits (2038), Expect = 0.0
Identities = 378/423 (89%), Positives = 395/423 (93%)
Frame = +1
Query: 37 MAGRQFGWRQPAXXXXXXGVNLMVMPPIQARSLRFVTLLYRHGDRSPVKTYPKDPYQEDK 216
MAG++ GW + A GVNL+VMPP +ARSLRFVTLLYRHGDRSPVKTYPKDPYQE++
Sbjct: 1 MAGKRSGWSRAALLQLLLGVNLVVMPPTRARSLRFVTLLYRHGDRSPVKTYPKDPYQEEE 60
Query: 217 WPQGFGQLTKEGMLQHWELGRALRQRYLGFLNTSYHRQEVYVRSTDFDRTLMSAEANLAG 396
WPQGFGQLTKEGMLQHWELG+ALRQRY GFLNTSYHRQEVYVRSTDFDRTLMSAEANLAG
Sbjct: 61 WPQGFGQLTKEGMLQHWELGQALRQRYHGFLNTSYHRQEVYVRSTDFDRTLMSAEANLAG 120
Query: 397 LFPPNGMQRFNPNISWQPIPVHTVPVTEDRLLKFPLGPCPRFEQLQNETRRTPEYQNESI 576
LFPPNGMQRFNPNISWQPIPVHTVP+TEDRLLKFPLGPCPR+EQLQNETR+TPEYQNES
Sbjct: 121 LFPPNGMQRFNPNISWQPIPVHTVPITEDRLLKFPLGPCPRYEQLQNETRQTPEYQNESS 180
Query: 577 QNAQFLEMVANETGLTDLTLETVWNVYDTLFCEQTHGLVLPPWASPQTMQRLSRLKDFSF 756
+NAQFL+MVANETGLTDLTLETVWNVYDTLFCEQTHGL LPPWASPQTMQRLSRLKDFSF
Sbjct: 181 RNAQFLDMVANETGLTDLTLETVWNVYDTLFCEQTHGLRLPPWASPQTMQRLSRLKDFSF 240
Query: 757 RFLFGIYEQAEKARLQGGVLLAQIRKNLTLMATTSQLPKLLVYSAHDTTLVALQMALDVY 936
RFLFGIY+QAEKARLQGGVLLAQIRKNLTLMATTSQLPKLLVYSAHDTTLVALQMALDVY
Sbjct: 241 RFLFGIYQQAEKARLQGGVLLAQIRKNLTLMATTSQLPKLLVYSAHDTTLVALQMALDVY 300
Query: 937 NGEQAPYAACHIFELYQEDNGNFSVEMYFRNESDKAPWPLILPGCPHRCPLQDFLRLTEP 1116
NGEQAPYA+CHIFELYQED+GNFSVEMYFRNESDKAPWPL LPGCPHRCPLQDFLRLTEP
Sbjct: 301 NGEQAPYASCHIFELYQEDSGNFSVEMYFRNESDKAPWPLSLPGCPHRCPLQDFLRLTEP 360
Query: 1117 VIPKDWQQECQLASGPADTEVIVALAVCGSXXXXXXXXXXXXXXRMQAQPPGYRHVADGE 1296
V+PKDWQQECQLASGPADTEVIVALAVCGS RMQAQPPGYRHVADGE
Sbjct: 361 VVPKDWQQECQLASGPADTEVIVALAVCGSILFLLIVLLLTVLFRMQAQPPGYRHVADGE 420
Query: 1297 DHA 1305
DHA
Sbjct: 421 DHA 423
>ref|NP_001127666.1| prostatic acid phosphatase isoform TM-PAP precursor [Homo sapiens].
Length = 418
Score = 385 bits (990), Expect = e-107
Identities = 185/362 (51%), Positives = 245/362 (67%), Gaps = 1/362 (0%)
Frame = +1
Query: 118 IQARSLRFVTLLYRHGDRSPVKTYPKDPYQEDKWPQGFGQLTKEGMLQHWELGRALRQRY 297
+ A+ L+FVTL++RHGDRSP+ T+P DP +E WPQGFGQLT+ GM QH+ELG +R+RY
Sbjct: 30 VLAKELKFVTLVFRHGDRSPIDTFPTDPIKESSWPQGFGQLTQLGMEQHYELGEYIRKRY 89
Query: 298 LGFLNTSYHRQEVYVRSTDFDRTLMSAEANLAGLFPPNGMQRFNPNISWQPIPVHTVPVT 477
FLN SY ++VY+RSTD DRTLMSA NLA LFPP G+ +NP + WQPIPVHTVP++
Sbjct: 90 RKFLNESYKHEQVYIRSTDVDRTLMSAMTNLAALFPPEGVSIWNPILLWQPIPVHTVPLS 149
Query: 478 EDRLLKFPLGPCPRFEQLQNETRRTPEYQNESIQNAQFLEMVANETGLTDLTLETVWN-V 654
ED+LL P CPRF++L++ET ++ E+Q F+ + +GL L +W+ V
Sbjct: 150 EDQLLYLPFRNCPRFQELESETLKSEEFQKRLHPYKDFIATLGKLSGLHGQDLFGIWSKV 209
Query: 655 YDTLFCEQTHGLVLPPWASPQTMQRLSRLKDFSFRFLFGIYEQAEKARLQGGVLLAQIRK 834
YD L+CE H LP WA+ TM +L L + S L+GI++Q EK+RLQGGVL+ +I
Sbjct: 210 YDPLYCESVHNFTLPSWATEDTMTKLRELSELSLLSLYGIHKQKEKSRLQGGVLVNEILN 269
Query: 835 NLTLMATTSQLPKLLVYSAHDTTLVALQMALDVYNGEQAPYAACHIFELYQEDNGNFSVE 1014
++ KL++YSAHDTT+ LQMALDVYNG PYA+CH+ ELY E G + VE
Sbjct: 270 HMKRATQIPSYKKLIMYSAHDTTVSGLQMALDVYNGLLPPYASCHLTELYFE-KGEYFVE 328
Query: 1015 MYFRNESDKAPWPLILPGCPHRCPLQDFLRLTEPVIPKDWQQECQLASGPADTEVIVALA 1194
MY+RNE+ P+PL+LPGC CPL+ F L PVIP+DW EC + +VI A+A
Sbjct: 329 MYYRNETQHEPYPLMLPGCSPSCPLERFAELVGPVIPQDWSTECMTTNSHQVLKVIFAVA 388
Query: 1195 VC 1200
C
Sbjct: 389 FC 390
>ref|NP_001090.2| prostatic acid phosphatase isoform PAP precursor [Homo sapiens].
Length = 386
Score = 381 bits (978), Expect = e-105
Identities = 182/354 (51%), Positives = 240/354 (67%), Gaps = 1/354 (0%)
Frame = +1
Query: 118 IQARSLRFVTLLYRHGDRSPVKTYPKDPYQEDKWPQGFGQLTKEGMLQHWELGRALRQRY 297
+ A+ L+FVTL++RHGDRSP+ T+P DP +E WPQGFGQLT+ GM QH+ELG +R+RY
Sbjct: 30 VLAKELKFVTLVFRHGDRSPIDTFPTDPIKESSWPQGFGQLTQLGMEQHYELGEYIRKRY 89
Query: 298 LGFLNTSYHRQEVYVRSTDFDRTLMSAEANLAGLFPPNGMQRFNPNISWQPIPVHTVPVT 477
FLN SY ++VY+RSTD DRTLMSA NLA LFPP G+ +NP + WQPIPVHTVP++
Sbjct: 90 RKFLNESYKHEQVYIRSTDVDRTLMSAMTNLAALFPPEGVSIWNPILLWQPIPVHTVPLS 149
Query: 478 EDRLLKFPLGPCPRFEQLQNETRRTPEYQNESIQNAQFLEMVANETGLTDLTLETVWN-V 654
ED+LL P CPRF++L++ET ++ E+Q F+ + +GL L +W+ V
Sbjct: 150 EDQLLYLPFRNCPRFQELESETLKSEEFQKRLHPYKDFIATLGKLSGLHGQDLFGIWSKV 209
Query: 655 YDTLFCEQTHGLVLPPWASPQTMQRLSRLKDFSFRFLFGIYEQAEKARLQGGVLLAQIRK 834
YD L+CE H LP WA+ TM +L L + S L+GI++Q EK+RLQGGVL+ +I
Sbjct: 210 YDPLYCESVHNFTLPSWATEDTMTKLRELSELSLLSLYGIHKQKEKSRLQGGVLVNEILN 269
Query: 835 NLTLMATTSQLPKLLVYSAHDTTLVALQMALDVYNGEQAPYAACHIFELYQEDNGNFSVE 1014
++ KL++YSAHDTT+ LQMALDVYNG PYA+CH+ ELY E G + VE
Sbjct: 270 HMKRATQIPSYKKLIMYSAHDTTVSGLQMALDVYNGLLPPYASCHLTELYFE-KGEYFVE 328
Query: 1015 MYFRNESDKAPWPLILPGCPHRCPLQDFLRLTEPVIPKDWQQECQLASGPADTE 1176
MY+RNE+ P+PL+LPGC CPL+ F L PVIP+DW EC + TE
Sbjct: 329 MYYRNETQHEPYPLMLPGCSPSCPLERFAELVGPVIPQDWSTECMTTNSHQGTE 382
>ref|NP_149059.1| testicular acid phosphatase precursor [Homo sapiens].
Length = 426
Score = 317 bits (813), Expect = 1e-86
Identities = 183/404 (45%), Positives = 238/404 (58%), Gaps = 17/404 (4%)
Frame = +1
Query: 37 MAGRQFGWRQPAXXXXXXGVNLMVMPP--IQARSLRFVTLLYRHGDRSPVKTYPKDPYQE 210
MAG F W PA + L+V+PP + L FV L++RHGDR+P+ +YP DP++E
Sbjct: 1 MAGLGF-WGHPAGPLLL--LLLLVLPPRALPEGPLVFVALVFRHGDRAPLASYPMDPHKE 57
Query: 211 ---DKWPQGFGQLTKEGMLQHWELGRALRQRYLGFLNTSYHRQEVYVRSTDFDRTLMSAE 381
WP+G GQLT EG+ Q ELGR LR RY FL+ Y R+EVY+RSTDFDRTL SA+
Sbjct: 58 VASTLWPRGLGQLTTEGVRQQLELGRFLRSRYEAFLSPEYRREEVYIRSTDFDRTLESAQ 117
Query: 382 ANLAGLFPPNGMQRFNPNISWQPIPVHTVPVTEDRLLKFPLGPCPRFEQLQNETRRTPEY 561
ANLAGLFP +P W+PIPVHTVPV ED+LL+FP+ CPR+ +L E EY
Sbjct: 118 ANLAGLFPEAAPG--SPEARWRPIPVHTVPVAEDKLLRFPMRSCPRYHELLREATEAAEY 175
Query: 562 QNESIQNAQFLEMVANETGLTDL--TLETVWNVYDTLFCEQTHGLVLPPWASPQTMQRLS 735
Q FL + N TGL+ + L W V DTL C+Q HGL LP WASP ++ L+
Sbjct: 176 QEALEGWTGFLSRLENFTGLSLVGEPLRRAWKVLDTLMCQQAHGLPLPAWASPDVLRTLA 235
Query: 736 RLKDFSFRFLFGIYEQAEKARLQGGVLLAQIRKNLTLMATTSQLPKLLVYSAHDTTLVAL 915
++ G AEKA+L GG+LL I N + + K+++YSAHD+TL+AL
Sbjct: 236 QISALDIGAHVGPPRAAEKAQLTGGILLNAILANFSRVQRLGLPLKMVMYSAHDSTLLAL 295
Query: 916 QMALDVYNGEQAPYAACHIFELYQ------EDNGNFSVEMYFRNESDKAPWPLILPGCPH 1077
Q AL +Y+G PYAAC FE + +D GN +V +++RN+S P PL LPGCP
Sbjct: 296 QGALGLYDGHTPPYAACLGFEFRKHLGNPAKDGGNVTVSLFYRNDSAHLPLPLSLPGCPA 355
Query: 1078 RCPLQDFLRLTEPVIPKDWQQEC----QLASGPADTEVIVALAV 1197
CPL F +LT P P C + A PA ++A AV
Sbjct: 356 PCPLGRFYQLTAPARPPAHGVSCHGPYEAAIPPAPVVPLLAGAV 399
>ref|NP_001124536.1| lysosomal acid phosphatase isoform 2 [Homo sapiens].
Length = 160
Score = 280 bits (715), Expect = 3e-75
Identities = 130/151 (86%), Positives = 140/151 (92%)
Frame = +1
Query: 37 MAGRQFGWRQPAXXXXXXGVNLMVMPPIQARSLRFVTLLYRHGDRSPVKTYPKDPYQEDK 216
MAG++ GW + A GVNL+VMPP +ARSLRFVTLLYRHGDRSPVKTYPKDPYQE++
Sbjct: 1 MAGKRSGWSRAALLQLLLGVNLVVMPPTRARSLRFVTLLYRHGDRSPVKTYPKDPYQEEE 60
Query: 217 WPQGFGQLTKEGMLQHWELGRALRQRYLGFLNTSYHRQEVYVRSTDFDRTLMSAEANLAG 396
WPQGFGQLTKEGMLQHWELG+ALRQRY GFLNTSYHRQEVYVRSTDFDRTLMSAEANLAG
Sbjct: 61 WPQGFGQLTKEGMLQHWELGQALRQRYHGFLNTSYHRQEVYVRSTDFDRTLMSAEANLAG 120
Query: 397 LFPPNGMQRFNPNISWQPIPVHTVPVTEDRL 489
LFPPNGMQRFNPNISWQPIPVHTVP+TEDR+
Sbjct: 121 LFPPNGMQRFNPNISWQPIPVHTVPITEDRV 151
>ref|NP_057445.3| lysophosphatidic acid phosphatase type 6 precursor [Homo sapiens].
Length = 428
Score = 93.2 bits (230), Expect = 6e-19
Identities = 99/374 (26%), Positives = 151/374 (40%), Gaps = 51/374 (13%)
Frame = +1
Query: 133 LRFVTLLYRHGDRSPVKTYPKDP------------------------------------- 201
L+ V +++RHG RSP+K P +
Sbjct: 50 LKMVQVVFRHGARSPLKPLPLEEQVEWNPQLLEVPPQTQFDYTVTNLAGGPKPYSPYDSQ 109
Query: 202 YQEDKWPQGF--GQLTKEGMLQHWELGRALRQRY---LGFLNTSYHRQEVYVRSTDFDRT 366
Y E G GQLTK GM Q + LG LR+ Y + FL+ +++ QEV++RST+ R
Sbjct: 110 YHETTLKGGMFAGQLTKVGMQQMFALGERLRKNYVEDIPFLSPTFNPQEVFIRSTNIFRN 169
Query: 367 LMSAEANLAGLFPPNGMQRFNPNISWQPIPVHTVPVTEDRLLKFPLGPCPRFEQLQNETR 546
L S LAGLF PI +HT + L P ++ + +
Sbjct: 170 LESTRCLLAGLFQCQ---------KEGPIIIHTDEADSEVLY-------PNYQSCWSLRQ 213
Query: 547 RTP-EYQNESIQN--AQFLEMVANETGLTDLTLETVWNVYDTLFCEQTHGLVLPPWASPQ 717
RT Q S+Q ++ L+ V + G+ + + D + EQ H L P
Sbjct: 214 RTRGRRQTASLQPGISEDLKKVKDRMGIDSSDKVDFFILLDNVAAEQAHNLPSCPMLKRF 273
Query: 718 TMQRLSRLKDFSFRFLFGIYEQAEKARLQGGVLLAQIRKNLTLMATTSQLP----KLLVY 885
R D S L E E ++ G L + NL ++ P KL +Y
Sbjct: 274 ARMIEQRAVDTSLYIL--PKEDRESLQMAVGPFLHILESNLLKAVDSATAPDKIRKLYLY 331
Query: 886 SAHDTTLVALQMALDVYNGEQAPYAACHIFELYQE-DNGNFSVEMYFRNESDKAPWPLIL 1062
+AHD T + L M L +++ + P+A ELYQ ++ + V++Y+ + +
Sbjct: 332 AAHDVTFIPLLMTLGIFDHKWPPFAVDLTMELYQHLESKEWFVQLYYHGKEQ------VP 385
Query: 1063 PGCPH-RCPLQDFL 1101
GCP CPL FL
Sbjct: 386 RGCPDGLCPLDMFL 399
>ref|NP_001032249.1| acid phosphatase-like protein 2 precursor [Homo sapiens].
Length = 480
Score = 56.6 bits (135), Expect = 6e-08
Identities = 84/337 (24%), Positives = 134/337 (39%), Gaps = 28/337 (8%)
Frame = +1
Query: 187 YPKDPYQEDKWPQGFGQLTKEGMLQHWELGRALRQRYLG---FLNTSYHRQEVYVRSTDF 357
YP P E G+LT+ G++QH + G+ LR YL L + ++Y+ +T
Sbjct: 154 YPNHPLCE------MGELTQTGVVQHLQNGQLLRDIYLKKHKLLPNDWSADQLYLETTGK 207
Query: 358 DRTLMSAEANLAGLFPPNGMQRFNPNISWQPIPVHTVPVTEDRLLKFPLGPC---PRFEQ 528
RTL S A L G F P+ W+ I P F G C R +
Sbjct: 208 SRTLQSGLALLYG---------FLPDFDWKKIYFRHQPSA-----LFCSGSCYCPVRNQY 253
Query: 529 LQNETRRTPEYQNESIQNAQFLEMVANETGLTDLTLETVW--NVYDTLFCEQTHGLVLPP 702
L+ E RR + ++N+Q + + D+ + + N D++ C H + P
Sbjct: 254 LEKEQRRQYLLR---LKNSQLEKTYGEMAKIVDVPTKQLRAANPIDSMLCHFCHNVSFP- 309
Query: 703 WASPQTMQRLSRLKDFSFRFLFGIYEQAEKARLQGGVLL-AQIRKNLTL----MATTSQL 867
+ + K + E+ EK G LL A N T+ AT +
Sbjct: 310 -CTRNGCVDMEHFKVIKTHQIEDERERREKKLYFGYSLLGAHPILNQTIGRMQRATEGRK 368
Query: 868 PKLL-VYSAHDTTLVALQMALDVYNGEQAPYAACHIFELYQ--EDNGNFSVEMYF----- 1023
+L +YSAHD TL + AL + +AA IFEL+Q E SV + +
Sbjct: 369 EELFALYSAHDVTLSPVLSALGLSEARFPRFAARLIFELWQDREKPSEHSVRILYNGVDV 428
Query: 1024 -------RNESDKAPWPLILPGCPHRCPLQDFLRLTE 1113
++ ++P P+ CPL++ +R +
Sbjct: 429 TFHTSFCQDHHKRSPKPM--------CPLENLVRFVK 457
>ref|NP_689495.1| acid phosphatase-like protein 2 precursor [Homo sapiens].
Length = 480
Score = 56.6 bits (135), Expect = 6e-08
Identities = 84/337 (24%), Positives = 134/337 (39%), Gaps = 28/337 (8%)
Frame = +1
Query: 187 YPKDPYQEDKWPQGFGQLTKEGMLQHWELGRALRQRYLG---FLNTSYHRQEVYVRSTDF 357
YP P E G+LT+ G++QH + G+ LR YL L + ++Y+ +T
Sbjct: 154 YPNHPLCE------MGELTQTGVVQHLQNGQLLRDIYLKKHKLLPNDWSADQLYLETTGK 207
Query: 358 DRTLMSAEANLAGLFPPNGMQRFNPNISWQPIPVHTVPVTEDRLLKFPLGPC---PRFEQ 528
RTL S A L G F P+ W+ I P F G C R +
Sbjct: 208 SRTLQSGLALLYG---------FLPDFDWKKIYFRHQPSA-----LFCSGSCYCPVRNQY 253
Query: 529 LQNETRRTPEYQNESIQNAQFLEMVANETGLTDLTLETVW--NVYDTLFCEQTHGLVLPP 702
L+ E RR + ++N+Q + + D+ + + N D++ C H + P
Sbjct: 254 LEKEQRRQYLLR---LKNSQLEKTYGEMAKIVDVPTKQLRAANPIDSMLCHFCHNVSFP- 309
Query: 703 WASPQTMQRLSRLKDFSFRFLFGIYEQAEKARLQGGVLL-AQIRKNLTL----MATTSQL 867
+ + K + E+ EK G LL A N T+ AT +
Sbjct: 310 -CTRNGCVDMEHFKVIKTHQIEDERERREKKLYFGYSLLGAHPILNQTIGRMQRATEGRK 368
Query: 868 PKLL-VYSAHDTTLVALQMALDVYNGEQAPYAACHIFELYQ--EDNGNFSVEMYF----- 1023
+L +YSAHD TL + AL + +AA IFEL+Q E SV + +
Sbjct: 369 EELFALYSAHDVTLSPVLSALGLSEARFPRFAARLIFELWQDREKPSEHSVRILYNGVDV 428
Query: 1024 -------RNESDKAPWPLILPGCPHRCPLQDFLRLTE 1113
++ ++P P+ CPL++ +R +
Sbjct: 429 TFHTSFCQDHHKRSPKPM--------CPLENLVRFVK 457
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 65,191,228
Number of extensions: 1884501
Number of successful extensions: 7030
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 6976
Number of HSP's successfully gapped: 8
Length of query: 511
Length of database: 18,297,164
Length adjustment: 107
Effective length of query: 404
Effective length of database: 14,770,016
Effective search space: 5967086464
Effective search space used: 5967086464
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-003186
(1535 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_031413.1| lysosomal acid phosphatase precursor [Mus muscu... 756 0.0
Alignment gi|NP_997551.1| prostatic acid phosphatase isoform 1 precursor ... 394 e-110
Alignment gi|NP_062781.2| prostatic acid phosphatase isoform 2 precursor ... 389 e-108
Alignment gi|XP_003084746.1| PREDICTED: testicular acid phosphatase-like ... 316 3e-86
Alignment gi|XP_003086645.1| PREDICTED: testicular acid phosphatase-like ... 316 3e-86
Alignment gi|NP_001181963.1| testicular acid phosphatase [Mus musculus]. 316 3e-86
Alignment gi|NP_062774.2| lysophosphatidic acid phosphatase type 6 precur... 89 1e-17
Alignment gi|NP_700469.1| acid phosphatase-like protein 2 precursor [Mus ... 52 1e-06
>ref|NP_031413.1| lysosomal acid phosphatase precursor [Mus musculus].
Length = 423
Score = 756 bits (1952), Expect = 0.0
Identities = 363/423 (85%), Positives = 384/423 (90%)
Frame = +1
Query: 37 MAGRQFGWRQPAXXXXXXGVNLMVMPPIQARSLRFVTLLYRHGDRSPVKTYPKDPYQEDK 216
MAGRQ GW Q A G+ L VMPPIQARSLRFVTLLYRHGDRSPVKTYPKDPYQE+K
Sbjct: 1 MAGRQTGWSQAALLQFLLGMCLTVMPPIQARSLRFVTLLYRHGDRSPVKTYPKDPYQEEK 60
Query: 217 WPQGFGQLTKEGMLQHWELGRALRQRYLGFLNTSYHRQEVYVRSTDFDRTLMSAEANLAG 396
WPQGFGQLTKEGMLQHWELG+ALRQRY GFLNTSYHRQEVYVRSTDFDRTLMSAEANLAG
Sbjct: 61 WPQGFGQLTKEGMLQHWELGQALRQRYHGFLNTSYHRQEVYVRSTDFDRTLMSAEANLAG 120
Query: 397 LFPPNGMQRFNPNISWQPIPVHTVPVTEDRLLKFPLGPCPRFEQLQNETRRTPEYQNESI 576
LFPPN +Q FNPNISWQPIPVHTVP+TEDRLLKFPLGPCPR+EQLQNETR+TPEYQN SI
Sbjct: 121 LFPPNEVQHFNPNISWQPIPVHTVPITEDRLLKFPLGPCPRYEQLQNETRQTPEYQNRSI 180
Query: 577 QNAQFLEMVANETGLTDLTLETVWNVYDTLFCEQTHGLVLPPWASPQTMQRLSRLKDFSF 756
QNAQFL MVANETGLT++TLET+WNVYDTLFCEQTHGL+LPPWASPQT+QRLS+LKDFSF
Sbjct: 181 QNAQFLNMVANETGLTNVTLETIWNVYDTLFCEQTHGLLLPPWASPQTVQRLSQLKDFSF 240
Query: 757 RFLFGIYEQAEKARLQGGVLLAQIRKNLTLMATTSQLPKLLVYSAHDTTLVALQMALDVY 936
FLFGI+EQ +KARLQGGVLLAQI KNLTLMATTSQ PKLLVYSAHDTTLVALQMAL+VY
Sbjct: 241 LFLFGIHEQVQKARLQGGVLLAQILKNLTLMATTSQFPKLLVYSAHDTTLVALQMALNVY 300
Query: 937 NGEQAPYAACHIFELYQEDNGNFSVEMYFRNESDKAPWPLILPGCPHRCPLQDFLRLTEP 1116
NG+QAPYA+CHIFELYQEDNGNFSVEMYFRN+S KAPWPLILPGCPHRCPLQDFLRLTEP
Sbjct: 301 NGKQAPYASCHIFELYQEDNGNFSVEMYFRNDSKKAPWPLILPGCPHRCPLQDFLRLTEP 360
Query: 1117 VIPKDWQQECQLASGPADTEVIVALAVCGSXXXXXXXXXXXXXXRMQAQPPGYRHVADGE 1296
VIPKDWQ+ECQLA+ ADTEVIVALAVCGS RMQAQPPGY HVAD E
Sbjct: 361 VIPKDWQKECQLANDTADTEVIVALAVCGSILFLLIVLLLTILFRMQAQPPGYHHVADRE 420
Query: 1297 DHA 1305
DHA
Sbjct: 421 DHA 423
>ref|NP_997551.1| prostatic acid phosphatase isoform 1 precursor [Mus musculus].
Length = 417
Score = 394 bits (1013), Expect = e-110
Identities = 188/367 (51%), Positives = 247/367 (67%), Gaps = 1/367 (0%)
Frame = +1
Query: 103 MVMPPIQARSLRFVTLLYRHGDRSPVKTYPKDPYQEDKWPQGFGQLTKEGMLQHWELGRA 282
+ + P QA+ L+FVTL++RHGDR P++T+P DP E WPQGFGQLT+ GM QH+ELG
Sbjct: 24 LCLDPGQAKELKFVTLVFRHGDRGPIETFPTDPITESSWPQGFGQLTQWGMEQHYELGSY 83
Query: 283 LRQRYLGFLNTSYHRQEVYVRSTDFDRTLMSAEANLAGLFPPNGMQRFNPNISWQPIPVH 462
+R+RY FLN +Y ++Y+RSTD DRTLMSA NLA LFPP G+ +NP + WQPIPVH
Sbjct: 84 IRKRYGRFLNDTYKHDQIYIRSTDVDRTLMSAMTNLAALFPPEGISIWNPRLLWQPIPVH 143
Query: 463 TVPVTEDRLLKFPLGPCPRFEQLQNETRRTPEYQNESIQNAQFLEMVANETGLTDLTLET 642
TV ++EDRLL P CPRFE+L++ET + E+ FL+ +++ +G D L
Sbjct: 144 TVSLSEDRLLYLPFRDCPRFEELKSETLESEEFLKRLHPYKSFLDTLSSLSGFDDQDLFG 203
Query: 643 VWN-VYDTLFCEQTHGLVLPPWASPQTMQRLSRLKDFSFRFLFGIYEQAEKARLQGGVLL 819
+W+ VYD LFCE H LP WA+ M +L L + S L+GI++Q EK+RLQGGVL+
Sbjct: 204 IWSKVYDPLFCESVHNFTLPSWATEDAMIKLKELSELSLLSLYGIHKQKEKSRLQGGVLV 263
Query: 820 AQIRKNLTLMATTSQLPKLLVYSAHDTTLVALQMALDVYNGEQAPYAACHIFELYQEDNG 999
+I KN+ L + KL++YSAHDTT+ LQMALDVYNG PYA+CH+ ELY + G
Sbjct: 264 NEILKNMKLATQPQKYKKLVMYSAHDTTVSGLQMALDVYNGVLPPYASCHMMELYHDKGG 323
Query: 1000 NFSVEMYFRNESDKAPWPLILPGCPHRCPLQDFLRLTEPVIPKDWQQECQLASGPADTEV 1179
+F VEMY+RNE+ P+PL LPGC H CPL+ F L +PVI +DW EC S V
Sbjct: 324 HF-VEMYYRNETQNEPYPLTLPGCTHSCPLEKFAELLDPVISQDWATECMATSSHQVLRV 382
Query: 1180 IVALAVC 1200
I+A C
Sbjct: 383 ILATTFC 389
>ref|NP_062781.2| prostatic acid phosphatase isoform 2 precursor [Mus musculus].
Length = 381
Score = 389 bits (1000), Expect = e-108
Identities = 184/353 (52%), Positives = 242/353 (68%), Gaps = 1/353 (0%)
Frame = +1
Query: 103 MVMPPIQARSLRFVTLLYRHGDRSPVKTYPKDPYQEDKWPQGFGQLTKEGMLQHWELGRA 282
+ + P QA+ L+FVTL++RHGDR P++T+P DP E WPQGFGQLT+ GM QH+ELG
Sbjct: 24 LCLDPGQAKELKFVTLVFRHGDRGPIETFPTDPITESSWPQGFGQLTQWGMEQHYELGSY 83
Query: 283 LRQRYLGFLNTSYHRQEVYVRSTDFDRTLMSAEANLAGLFPPNGMQRFNPNISWQPIPVH 462
+R+RY FLN +Y ++Y+RSTD DRTLMSA NLA LFPP G+ +NP + WQPIPVH
Sbjct: 84 IRKRYGRFLNDTYKHDQIYIRSTDVDRTLMSAMTNLAALFPPEGISIWNPRLLWQPIPVH 143
Query: 463 TVPVTEDRLLKFPLGPCPRFEQLQNETRRTPEYQNESIQNAQFLEMVANETGLTDLTLET 642
TV ++EDRLL P CPRFE+L++ET + E+ FL+ +++ +G D L
Sbjct: 144 TVSLSEDRLLYLPFRDCPRFEELKSETLESEEFLKRLHPYKSFLDTLSSLSGFDDQDLFG 203
Query: 643 VWN-VYDTLFCEQTHGLVLPPWASPQTMQRLSRLKDFSFRFLFGIYEQAEKARLQGGVLL 819
+W+ VYD LFCE H LP WA+ M +L L + S L+GI++Q EK+RLQGGVL+
Sbjct: 204 IWSKVYDPLFCESVHNFTLPSWATEDAMIKLKELSELSLLSLYGIHKQKEKSRLQGGVLV 263
Query: 820 AQIRKNLTLMATTSQLPKLLVYSAHDTTLVALQMALDVYNGEQAPYAACHIFELYQEDNG 999
+I KN+ L + KL++YSAHDTT+ LQMALDVYNG PYA+CH+ ELY + G
Sbjct: 264 NEILKNMKLATQPQKYKKLVMYSAHDTTVSGLQMALDVYNGVLPPYASCHMMELYHDKGG 323
Query: 1000 NFSVEMYFRNESDKAPWPLILPGCPHRCPLQDFLRLTEPVIPKDWQQECQLAS 1158
+F VEMY+RNE+ P+PL LPGC H CPL+ F L +PVI +DW EC S
Sbjct: 324 HF-VEMYYRNETQNEPYPLTLPGCTHSCPLEKFAELLDPVISQDWATECMATS 375
>ref|XP_003084746.1| PREDICTED: testicular acid phosphatase-like [Mus musculus].
Length = 425
Score = 316 bits (810), Expect = 3e-86
Identities = 169/365 (46%), Positives = 222/365 (60%), Gaps = 12/365 (3%)
Frame = +1
Query: 133 LRFVTLLYRHGDRSPVKTYPKDPYQEDK---WPQGFGQLTKEGMLQHWELGRALRQRYLG 303
L FV L++RHGDR+P+ +YP DP++E WP+G GQLTKEG+ Q ELGR LR+RY
Sbjct: 31 LLFVALVFRHGDRAPLASYPTDPHKEAASTLWPRGLGQLTKEGIRQQLELGRFLRRRYKA 90
Query: 304 FLNTSYHRQEVYVRSTDFDRTLMSAEANLAGLFPPNGMQRFNPNISWQPIPVHTVPVTED 483
FL+ Y R+EVY+RSTDFDRTL SA+ANLAGLFP +P W+PIPVHTVPV+ED
Sbjct: 91 FLSPEYKREEVYIRSTDFDRTLESAQANLAGLFPEAAPG--SPETDWKPIPVHTVPVSED 148
Query: 484 RLLKFPLGPCPRFEQLQNETRRTPEYQNESIQNAQFLEMVANETGLTDL--TLETVWNVY 657
+LL+FP+ CPR+ +L E+ +YQ FL + N TGL+ + L W V
Sbjct: 149 KLLRFPMRSCPRYHELLRESTEAADYQEALEGWTDFLTRLGNFTGLSLVGEPLRRAWKVL 208
Query: 658 DTLFCEQTHGLVLPPWASPQTMQRLSRLKDFSFRFLFGIYEQAEKARLQGGVLLAQIRKN 837
DTL C++ HGL LP WASP ++ LS++ R G AEKA+L GG+LL I N
Sbjct: 209 DTLICQRAHGLDLPSWASPDVLRTLSQISALDIRAHVGPPRAAEKAQLTGGILLDAILSN 268
Query: 838 LTLMATTSQLPKLLVYSAHDTTLVALQMALDVYNGEQAPYAACHIFEL-------YQEDN 996
+ K+++YSAHD+TL+ALQ AL +Y+G PYAAC FE +ED
Sbjct: 269 FSRTQRLGLPLKMVMYSAHDSTLLALQGALGLYDGNTPPYAACMAFEFRGSSREPEEEDG 328
Query: 997 GNFSVEMYFRNESDKAPWPLILPGCPHRCPLQDFLRLTEPVIPKDWQQECQLASGPADTE 1176
N +V + +RN++ + P PL +PGCP CPL F +LT P P C + PA
Sbjct: 329 ENVTVSLIYRNDTSRPPLPLRVPGCPAPCPLGRFQQLTAPARPPAHGAPCHGSYEPASPP 388
Query: 1177 VIVAL 1191
V L
Sbjct: 389 ATVPL 393
>ref|XP_003086645.1| PREDICTED: testicular acid phosphatase-like [Mus musculus].
Length = 425
Score = 316 bits (810), Expect = 3e-86
Identities = 169/365 (46%), Positives = 222/365 (60%), Gaps = 12/365 (3%)
Frame = +1
Query: 133 LRFVTLLYRHGDRSPVKTYPKDPYQEDK---WPQGFGQLTKEGMLQHWELGRALRQRYLG 303
L FV L++RHGDR+P+ +YP DP++E WP+G GQLTKEG+ Q ELGR LR+RY
Sbjct: 31 LLFVALVFRHGDRAPLASYPTDPHKEAASTLWPRGLGQLTKEGIRQQLELGRFLRRRYKA 90
Query: 304 FLNTSYHRQEVYVRSTDFDRTLMSAEANLAGLFPPNGMQRFNPNISWQPIPVHTVPVTED 483
FL+ Y R+EVY+RSTDFDRTL SA+ANLAGLFP +P W+PIPVHTVPV+ED
Sbjct: 91 FLSPEYKREEVYIRSTDFDRTLESAQANLAGLFPEAAPG--SPETDWKPIPVHTVPVSED 148
Query: 484 RLLKFPLGPCPRFEQLQNETRRTPEYQNESIQNAQFLEMVANETGLTDL--TLETVWNVY 657
+LL+FP+ CPR+ +L E+ +YQ FL + N TGL+ + L W V
Sbjct: 149 KLLRFPMRSCPRYHELLRESTEAADYQEALEGWTDFLTRLGNFTGLSLVGEPLRRAWKVL 208
Query: 658 DTLFCEQTHGLVLPPWASPQTMQRLSRLKDFSFRFLFGIYEQAEKARLQGGVLLAQIRKN 837
DTL C++ HGL LP WASP ++ LS++ R G AEKA+L GG+LL I N
Sbjct: 209 DTLICQRAHGLDLPSWASPDVLRTLSQISALDIRAHVGPPRAAEKAQLTGGILLDAILSN 268
Query: 838 LTLMATTSQLPKLLVYSAHDTTLVALQMALDVYNGEQAPYAACHIFEL-------YQEDN 996
+ K+++YSAHD+TL+ALQ AL +Y+G PYAAC FE +ED
Sbjct: 269 FSRTQRLGLPLKMVMYSAHDSTLLALQGALGLYDGNTPPYAACMAFEFRGSSREPEEEDG 328
Query: 997 GNFSVEMYFRNESDKAPWPLILPGCPHRCPLQDFLRLTEPVIPKDWQQECQLASGPADTE 1176
N +V + +RN++ + P PL +PGCP CPL F +LT P P C + PA
Sbjct: 329 ENVTVSLIYRNDTSRPPLPLRVPGCPAPCPLGRFQQLTAPARPPAHGAPCHGSYEPASPP 388
Query: 1177 VIVAL 1191
V L
Sbjct: 389 ATVPL 393
>ref|NP_001181963.1| testicular acid phosphatase [Mus musculus].
Length = 425
Score = 316 bits (810), Expect = 3e-86
Identities = 169/365 (46%), Positives = 222/365 (60%), Gaps = 12/365 (3%)
Frame = +1
Query: 133 LRFVTLLYRHGDRSPVKTYPKDPYQEDK---WPQGFGQLTKEGMLQHWELGRALRQRYLG 303
L FV L++RHGDR+P+ +YP DP++E WP+G GQLTKEG+ Q ELGR LR+RY
Sbjct: 31 LLFVALVFRHGDRAPLASYPTDPHKEAASTLWPRGLGQLTKEGIRQQLELGRFLRRRYKA 90
Query: 304 FLNTSYHRQEVYVRSTDFDRTLMSAEANLAGLFPPNGMQRFNPNISWQPIPVHTVPVTED 483
FL+ Y R+EVY+RSTDFDRTL SA+ANLAGLFP +P W+PIPVHTVPV+ED
Sbjct: 91 FLSPEYKREEVYIRSTDFDRTLESAQANLAGLFPEAAPG--SPETDWKPIPVHTVPVSED 148
Query: 484 RLLKFPLGPCPRFEQLQNETRRTPEYQNESIQNAQFLEMVANETGLTDL--TLETVWNVY 657
+LL+FP+ CPR+ +L E+ +YQ FL + N TGL+ + L W V
Sbjct: 149 KLLRFPMRSCPRYHELLRESTEAADYQEALEGWTDFLTRLGNFTGLSLVGEPLRRAWKVL 208
Query: 658 DTLFCEQTHGLVLPPWASPQTMQRLSRLKDFSFRFLFGIYEQAEKARLQGGVLLAQIRKN 837
DTL C++ HGL LP WASP ++ LS++ R G AEKA+L GG+LL I N
Sbjct: 209 DTLICQRAHGLDLPSWASPDVLRTLSQISALDIRAHVGPPRAAEKAQLTGGILLDAILSN 268
Query: 838 LTLMATTSQLPKLLVYSAHDTTLVALQMALDVYNGEQAPYAACHIFEL-------YQEDN 996
+ K+++YSAHD+TL+ALQ AL +Y+G PYAAC FE +ED
Sbjct: 269 FSRTQRLGLPLKMVMYSAHDSTLLALQGALGLYDGNTPPYAACMAFEFRGSSREPEEEDG 328
Query: 997 GNFSVEMYFRNESDKAPWPLILPGCPHRCPLQDFLRLTEPVIPKDWQQECQLASGPADTE 1176
N +V + +RN++ + P PL +PGCP CPL F +LT P P C + PA
Sbjct: 329 ENVTVSLIYRNDTSRPPLPLRVPGCPAPCPLGRFQQLTAPARPPAHGAPCHGSYEPASPP 388
Query: 1177 VIVAL 1191
V L
Sbjct: 389 ATVPL 393
>ref|NP_062774.2| lysophosphatidic acid phosphatase type 6 precursor [Mus musculus].
Length = 418
Score = 88.6 bits (218), Expect = 1e-17
Identities = 97/395 (24%), Positives = 160/395 (40%), Gaps = 57/395 (14%)
Frame = +1
Query: 133 LRFVTLLYRHGDRSPVKTYPKDPYQEDKW--------PQG-------------------- 228
L+ V +++RHG RSP+K P + ++ +W PQ
Sbjct: 43 LKMVQVVFRHGARSPLKPLPLE--EQVEWNPKLLEIPPQTRFDYTVTNLAGGPKPHSHYD 100
Query: 229 -------------FGQLTKEGMLQHWELGRALRQRY---LGFLNTSYHRQEVYVRSTDFD 360
GQLTK GM Q + LG LR+ Y + FL+ Y+ QEV++RST+
Sbjct: 101 TEYRKTTLRGGVLAGQLTKVGMQQMFALGEKLRKNYVEDIPFLSPVYNPQEVFIRSTNMF 160
Query: 361 RTLMSAEANLAGLFPPNGMQRFNPNISWQPIPVHTVPVTEDRLLKFPLGPCPRFEQ---L 531
R L S LAGLF +HT + + L P ++ L
Sbjct: 161 RNLESTRCLLAGLFQHQKGSAV----------IHTDEASSEVLY-------PNYQSCWVL 203
Query: 532 QNETRRTPEYQNESIQNAQFLEMVANETGLTDLTLETVWNVYDTLFCEQTHGLVLPPWAS 711
+ +TR + ++ LE V G+ + + + D + EQ H L+ P
Sbjct: 204 KEKTRGRKKAAISQPGISEDLEKVKTGVGINNGDDVDFFVLLDNVAAEQVHSLLNCP--- 260
Query: 712 PQTMQRLSRL-KDFSFRFLFGIYEQAEKARLQGGV------LLAQIRKNLTLMATTSQLP 870
++R ++L + + + EQ ++ +Q V L + K + S+
Sbjct: 261 --ALERFAQLIEQRAVDMALYVVEQEDRESIQMAVGPFLHILEGNLLKTVDPTTAPSKTR 318
Query: 871 KLLVYSAHDTTLVALQMALDVYNGEQAPYAACHIFELYQEDNGNFSVEMYFRNESDKAPW 1050
K+ +Y+ HD TL+ + +AL +++ + P+A ELYQ F N ++ P
Sbjct: 319 KMYLYATHDVTLLPMLLALGIFDQKWPPFAVDLTMELYQHQESKEWFVQLFYNGKEQVP- 377
Query: 1051 PLILPGCPHR-CPLQDFLRLTE--PVIPKDWQQEC 1146
GCP + CPL FL V P+ ++ C
Sbjct: 378 ----RGCPDKLCPLDKFLNTMSVYSVSPEKYRTLC 408
>ref|NP_700469.1| acid phosphatase-like protein 2 precursor [Mus musculus].
Length = 480
Score = 52.0 bits (123), Expect = 1e-06
Identities = 70/282 (24%), Positives = 108/282 (38%), Gaps = 14/282 (4%)
Frame = +1
Query: 187 YPKDPYQEDKWPQGFGQLTKEGMLQHWELGRALRQRYLG---FLNTSYHRQEVYVRSTDF 357
YP P E G+LT+ G++QH G+ LR YL L ++ ++Y+ ST
Sbjct: 154 YPNHPLCET------GELTQTGVVQHLLNGQLLRDIYLRKHKLLPNNWSSDQLYLESTGK 207
Query: 358 DRTLMSAEANLAGLFPPNGMQRFNPNISWQPIPVHTVPVTEDRLLKFPLGPCP---RFEQ 528
RTL S A L G F P W+ + P F G C R +
Sbjct: 208 SRTLQSGLALLYG---------FLPEFDWKKVYFKHQPSA-----LFCSGSCYCPLRNQY 253
Query: 529 LQNETRRTPEYQNESIQNAQFLEMVANETGLTDLTLETVW--NVYDTLFCEQTHGLVLPP 702
L+ E RR + ++N+ + D+ + + N D++ C H + P
Sbjct: 254 LEKEQRRQYLLR---LKNSDLERTYGEMAKIVDIPTKQLRAANPIDSMLCHFCHNVSFP- 309
Query: 703 WASPQTMQRLSRLKDFSFRFLFGIYEQAEKARLQGGVLLA------QIRKNLTLMATTSQ 864
S + K + E+ EK G LL Q + A+ +
Sbjct: 310 -CSRSGCLGMEHFKVIKTHQIEDERERHEKLLYFGYSLLGAHPILNQTVNRMQRAASGWR 368
Query: 865 LPKLLVYSAHDTTLVALQMALDVYNGEQAPYAACHIFELYQE 990
+YSAHD TL + AL + +AA +FEL+Q+
Sbjct: 369 DELFTLYSAHDVTLSPILSALGLLEARFPRFAARLVFELWQD 410
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 55,029,343
Number of extensions: 1572415
Number of successful extensions: 5612
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 5545
Number of HSP's successfully gapped: 8
Length of query: 511
Length of database: 15,617,559
Length adjustment: 106
Effective length of query: 405
Effective length of database: 12,433,743
Effective search space: 5035665915
Effective search space used: 5035665915
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-003186
(1535 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_003122860.1| PREDICTED: lysosomal acid phosphatase-like i... 832 0.0
Alignment gi|XP_003361177.1| PREDICTED: lysosomal acid phosphatase-like [... 769 0.0
Alignment gi|XP_003353920.1| PREDICTED: lysosomal acid phosphatase-like i... 744 0.0
Alignment gi|XP_003356059.1| PREDICTED: testicular acid phosphatase [Sus ... 305 3e-83
Alignment gi|XP_003132467.2| PREDICTED: prostatic acid phosphatase, parti... 216 2e-56
Alignment gi|XP_003358602.1| PREDICTED: prostatic acid phosphatase-like [... 129 6e-30
Alignment gi|XP_003358603.1| PREDICTED: prostatic acid phosphatase-like [... 124 1e-28
Alignment gi|XP_001928381.3| PREDICTED: lysophosphatidic acid phosphatase... 96 5e-20
Alignment gi|XP_003132500.2| PREDICTED: acid phosphatase-like protein 2 [... 56 6e-08
>ref|XP_003122860.1| PREDICTED: lysosomal acid phosphatase-like isoform 1 [Sus scrofa].
Length = 423
Score = 832 bits (2149), Expect = 0.0
Identities = 403/423 (95%), Positives = 403/423 (95%)
Frame = +1
Query: 37 MAGRQFGWRQPAXXXXXXGVNLMVMPPIQARSLRFVTLLYRHGDRSPVKTYPKDPYQEDK 216
MAGRQFGWRQPA GVNLMVMPPIQARSLRFVTLLYRHGDRSPVKTYPKDPYQEDK
Sbjct: 1 MAGRQFGWRQPALLQLLLGVNLMVMPPIQARSLRFVTLLYRHGDRSPVKTYPKDPYQEDK 60
Query: 217 WPQGFGQLTKEGMLQHWELGRALRQRYLGFLNTSYHRQEVYVRSTDFDRTLMSAEANLAG 396
WPQGFGQLTKEGMLQHWELGRALRQRYLGFLNTSYHRQEVYVRSTDFDRTLMSAEANLAG
Sbjct: 61 WPQGFGQLTKEGMLQHWELGRALRQRYLGFLNTSYHRQEVYVRSTDFDRTLMSAEANLAG 120
Query: 397 LFPPNGMQRFNPNISWQPIPVHTVPVTEDRLLKFPLGPCPRFEQLQNETRRTPEYQNESI 576
LFPPNGMQRFNPNISWQPIPVHTVPVTEDRLLKFPLGPCPRFEQLQNETRRTPEYQNESI
Sbjct: 121 LFPPNGMQRFNPNISWQPIPVHTVPVTEDRLLKFPLGPCPRFEQLQNETRRTPEYQNESI 180
Query: 577 QNAQFLEMVANETGLTDLTLETVWNVYDTLFCEQTHGLVLPPWASPQTMQRLSRLKDFSF 756
QNAQFLEMVANETGLTDLTLETVWNVYDTLFCEQTHGLVLPPWASPQTMQRLSRLKDFSF
Sbjct: 181 QNAQFLEMVANETGLTDLTLETVWNVYDTLFCEQTHGLVLPPWASPQTMQRLSRLKDFSF 240
Query: 757 RFLFGIYEQAEKARLQGGVLLAQIRKNLTLMATTSQLPKLLVYSAHDTTLVALQMALDVY 936
RFLFGIYEQAEKARLQGGVLLAQIRKNLTLMATTSQLPKLLVYSAHDTTLVALQMALDVY
Sbjct: 241 RFLFGIYEQAEKARLQGGVLLAQIRKNLTLMATTSQLPKLLVYSAHDTTLVALQMALDVY 300
Query: 937 NGEQAPYAACHIFELYQEDNGNFSVEMYFRNESDKAPWPLILPGCPHRCPLQDFLRLTEP 1116
NGEQAPYAACHIFELYQEDNGNFSVEMYFRNESDKAPWPLILPGCPHRCPLQDFLRLTEP
Sbjct: 301 NGEQAPYAACHIFELYQEDNGNFSVEMYFRNESDKAPWPLILPGCPHRCPLQDFLRLTEP 360
Query: 1117 VIPKDWQQECQLASGPADTEVIVALAVCGSXXXXXXXXXXXXXXRMQAQPPGYRHVADGE 1296
VIPKDWQQECQLASGPADTEVIVALAVCGS RMQAQPPGYRHVADGE
Sbjct: 361 VIPKDWQQECQLASGPADTEVIVALAVCGSILFLLIVLLLTVLFRMQAQPPGYRHVADGE 420
Query: 1297 DHA 1305
DHA
Sbjct: 421 DHA 423
>ref|XP_003361177.1| PREDICTED: lysosomal acid phosphatase-like [Sus scrofa].
Length = 452
Score = 769 bits (1987), Expect = 0.0
Identities = 371/372 (99%), Positives = 371/372 (99%)
Frame = +1
Query: 91 GVNLMVMPPIQARSLRFVTLLYRHGDRSPVKTYPKDPYQEDKWPQGFGQLTKEGMLQHWE 270
GVNLMVMPPIQARSLRF TLLYRHGDRSPVKTYPKDPYQEDKWPQGFGQLTKEGMLQHWE
Sbjct: 21 GVNLMVMPPIQARSLRFETLLYRHGDRSPVKTYPKDPYQEDKWPQGFGQLTKEGMLQHWE 80
Query: 271 LGRALRQRYLGFLNTSYHRQEVYVRSTDFDRTLMSAEANLAGLFPPNGMQRFNPNISWQP 450
LGRALRQRYLGFLNTSYHRQEVYVRSTDFDRTLMSAEANLAGLFPPNGMQRFNPNISWQP
Sbjct: 81 LGRALRQRYLGFLNTSYHRQEVYVRSTDFDRTLMSAEANLAGLFPPNGMQRFNPNISWQP 140
Query: 451 IPVHTVPVTEDRLLKFPLGPCPRFEQLQNETRRTPEYQNESIQNAQFLEMVANETGLTDL 630
IPVHTVPVTEDRLLKFPLGPCPRFEQLQNETRRTPEYQNESIQNAQFLEMVANETGLTDL
Sbjct: 141 IPVHTVPVTEDRLLKFPLGPCPRFEQLQNETRRTPEYQNESIQNAQFLEMVANETGLTDL 200
Query: 631 TLETVWNVYDTLFCEQTHGLVLPPWASPQTMQRLSRLKDFSFRFLFGIYEQAEKARLQGG 810
TLETVWNVYDTLFCEQTHGLVLPPWASPQTMQRLSRLKDFSFRFLFGIYEQAEKARLQGG
Sbjct: 201 TLETVWNVYDTLFCEQTHGLVLPPWASPQTMQRLSRLKDFSFRFLFGIYEQAEKARLQGG 260
Query: 811 VLLAQIRKNLTLMATTSQLPKLLVYSAHDTTLVALQMALDVYNGEQAPYAACHIFELYQE 990
VLLAQIRKNLTLMATTSQLPKLLVYSAHDTTLVALQMALDVYNGEQAPYAACHIFELYQE
Sbjct: 261 VLLAQIRKNLTLMATTSQLPKLLVYSAHDTTLVALQMALDVYNGEQAPYAACHIFELYQE 320
Query: 991 DNGNFSVEMYFRNESDKAPWPLILPGCPHRCPLQDFLRLTEPVIPKDWQQECQLASGPAD 1170
DNGNFSVEMYFRNESDKAPWPLILPGCPHRCPLQDFLRLTEPVIPKDWQQECQLASGPAD
Sbjct: 321 DNGNFSVEMYFRNESDKAPWPLILPGCPHRCPLQDFLRLTEPVIPKDWQQECQLASGPAD 380
Query: 1171 TEVIVALAVCGS 1206
TEVIVALAVCGS
Sbjct: 381 TEVIVALAVCGS 392
Score = 60.1 bits (144), Expect = 3e-09
Identities = 27/29 (93%), Positives = 27/29 (93%)
Frame = +2
Query: 1427 FPSLDEQLGLSLAHGTCHSAFMCLMFTKY 1513
F LDEQLGLSLAHGTCHSAFMCLMFTKY
Sbjct: 406 FRILDEQLGLSLAHGTCHSAFMCLMFTKY 434
>ref|XP_003353920.1| PREDICTED: lysosomal acid phosphatase-like isoform 2 [Sus scrofa].
Length = 391
Score = 744 bits (1920), Expect = 0.0
Identities = 371/423 (87%), Positives = 371/423 (87%)
Frame = +1
Query: 37 MAGRQFGWRQPAXXXXXXGVNLMVMPPIQARSLRFVTLLYRHGDRSPVKTYPKDPYQEDK 216
MAGRQFGWRQPA GVNLMVMPPIQARSLRFVTL
Sbjct: 1 MAGRQFGWRQPALLQLLLGVNLMVMPPIQARSLRFVTL---------------------- 38
Query: 217 WPQGFGQLTKEGMLQHWELGRALRQRYLGFLNTSYHRQEVYVRSTDFDRTLMSAEANLAG 396
EGMLQHWELGRALRQRYLGFLNTSYHRQEVYVRSTDFDRTLMSAEANLAG
Sbjct: 39 ----------EGMLQHWELGRALRQRYLGFLNTSYHRQEVYVRSTDFDRTLMSAEANLAG 88
Query: 397 LFPPNGMQRFNPNISWQPIPVHTVPVTEDRLLKFPLGPCPRFEQLQNETRRTPEYQNESI 576
LFPPNGMQRFNPNISWQPIPVHTVPVTEDRLLKFPLGPCPRFEQLQNETRRTPEYQNESI
Sbjct: 89 LFPPNGMQRFNPNISWQPIPVHTVPVTEDRLLKFPLGPCPRFEQLQNETRRTPEYQNESI 148
Query: 577 QNAQFLEMVANETGLTDLTLETVWNVYDTLFCEQTHGLVLPPWASPQTMQRLSRLKDFSF 756
QNAQFLEMVANETGLTDLTLETVWNVYDTLFCEQTHGLVLPPWASPQTMQRLSRLKDFSF
Sbjct: 149 QNAQFLEMVANETGLTDLTLETVWNVYDTLFCEQTHGLVLPPWASPQTMQRLSRLKDFSF 208
Query: 757 RFLFGIYEQAEKARLQGGVLLAQIRKNLTLMATTSQLPKLLVYSAHDTTLVALQMALDVY 936
RFLFGIYEQAEKARLQGGVLLAQIRKNLTLMATTSQLPKLLVYSAHDTTLVALQMALDVY
Sbjct: 209 RFLFGIYEQAEKARLQGGVLLAQIRKNLTLMATTSQLPKLLVYSAHDTTLVALQMALDVY 268
Query: 937 NGEQAPYAACHIFELYQEDNGNFSVEMYFRNESDKAPWPLILPGCPHRCPLQDFLRLTEP 1116
NGEQAPYAACHIFELYQEDNGNFSVEMYFRNESDKAPWPLILPGCPHRCPLQDFLRLTEP
Sbjct: 269 NGEQAPYAACHIFELYQEDNGNFSVEMYFRNESDKAPWPLILPGCPHRCPLQDFLRLTEP 328
Query: 1117 VIPKDWQQECQLASGPADTEVIVALAVCGSXXXXXXXXXXXXXXRMQAQPPGYRHVADGE 1296
VIPKDWQQECQLASGPADTEVIVALAVCGS RMQAQPPGYRHVADGE
Sbjct: 329 VIPKDWQQECQLASGPADTEVIVALAVCGSILFLLIVLLLTVLFRMQAQPPGYRHVADGE 388
Query: 1297 DHA 1305
DHA
Sbjct: 389 DHA 391
>ref|XP_003356059.1| PREDICTED: testicular acid phosphatase [Sus scrofa].
Length = 445
Score = 305 bits (782), Expect = 3e-83
Identities = 168/380 (44%), Positives = 224/380 (58%), Gaps = 11/380 (2%)
Frame = +1
Query: 100 LMVMPPIQARSLRFVTLLYRHGDRSPVKTYPKDPYQED---KWPQGFGQLTKEGMLQHWE 270
L++ + L FV +++RHGDR+P+ +YP DP++E+ WP+G GQLT+EG+ Q E
Sbjct: 40 LLLRQALTEGPLVFVAVVFRHGDRAPLASYPTDPHKENIATLWPRGLGQLTREGVHQQLE 99
Query: 271 LGRALRQRYLGFLNTSYHRQEVYVRSTDFDRTLMSAEANLAGLFPPNGMQRFNPNISWQP 450
LGR LR RY FL+ Y R+EVY+RSTDFDRTL SA+ANLAGLFP R +WQP
Sbjct: 100 LGRFLRSRYESFLSPQYRREEVYIRSTDFDRTLESAQANLAGLFPEASPGR--SEATWQP 157
Query: 451 IPVHTVPVTEDRLLKFPLGPCPRFEQLQNETRRTPEYQNESIQNAQFLEMVANETGLTDL 630
IPVHTVPVTED+LL+FP CPR+ +L E EY+ FL + N TGL+ +
Sbjct: 158 IPVHTVPVTEDKLLRFPTRSCPRYRELLREATEAAEYKAALEGWTDFLTRLENFTGLSLV 217
Query: 631 --TLETVWNVYDTLFCEQTHGLVLPPWASPQTMQRLSRLKDFSFRFLFGIYEQAEKARLQ 804
L W V DTL C+Q HGL LP WASP +Q L+++ G AEKA+L
Sbjct: 218 GEPLRKAWKVLDTLICQQAHGLPLPSWASPDVLQTLAQISALDIGAHVGPPRAAEKAQLT 277
Query: 805 GGVLLAQIRKNLTLMATTSQLPKLLVYSAHDTTLVALQMALDVYNGEQAPYAACHIFEL- 981
GG+LL I N + + K+++YSAHD+TL+ALQ AL +Y+G PYAAC FE
Sbjct: 278 GGILLDAILANFSRVQHLGLPLKMVMYSAHDSTLLALQGALGLYDGHTPPYAACLGFEFR 337
Query: 982 -----YQEDNGNFSVEMYFRNESDKAPWPLILPGCPHRCPLQDFLRLTEPVIPKDWQQEC 1146
++ GN ++ +++RN+S P L LPGCP C L F +LT P P C
Sbjct: 338 RHLGDLDDNRGNVTISLFYRNDSTGLPLTLKLPGCPAPCSLGRFRQLTAPARPSVQGIPC 397
Query: 1147 QLASGPADTEVIVALAVCGS 1206
+ PA V + G+
Sbjct: 398 HGSHEPATPAATVVPLLSGA 417
>ref|XP_003132467.2| PREDICTED: prostatic acid phosphatase, partial [Sus scrofa].
Length = 236
Score = 216 bits (551), Expect = 2e-56
Identities = 101/176 (57%), Positives = 129/176 (73%), Gaps = 1/176 (0%)
Frame = +1
Query: 151 LYRHGDRSPVKTYPKDPYQEDKWPQGFGQLTKEGMLQHWELGRALRQRYLGFLNTSYHRQ 330
++RHGDRSP++T+PKDP +E WPQGFGQLT+ GM QH+ELG +R+RY FLN SY +
Sbjct: 61 VFRHGDRSPIETFPKDPIKESSWPQGFGQLTQLGMEQHYELGEYIRKRYEKFLNESYKHE 120
Query: 331 EVYVRSTDFDRTLMSAEANLAGLFPPNGMQRFNPNISWQPIPVHTVPVTEDRLLKFPLGP 510
+VYVRSTD DRTLMSA NLAGLFPP G+ +NPN+ WQPIPVHTVP++ED+LL P
Sbjct: 121 QVYVRSTDIDRTLMSAMTNLAGLFPPEGISIWNPNLLWQPIPVHTVPLSEDQLLYLPFRN 180
Query: 511 CPRFEQLQNETRRTPEYQNESIQNAQFLEMVANETGLTDLTLETVW-NVYDTLFCE 675
CPRF++L++ET ++ E+Q F+E + TG L +W NVYD LFCE
Sbjct: 181 CPRFQELESETLKSEEFQKRLHPYKDFIENLPKLTGYHGQNLFGIWSNVYDPLFCE 236
>ref|XP_003358602.1| PREDICTED: prostatic acid phosphatase-like [Sus scrofa].
Length = 191
Score = 129 bits (323), Expect = 6e-30
Identities = 65/127 (51%), Positives = 81/127 (63%)
Frame = +1
Query: 802 QGGVLLAQIRKNLTLMATTSQLPKLLVYSAHDTTLVALQMALDVYNGEQAPYAACHIFEL 981
Q GVL+ I ++ S KL++YSAHDTT+ ALQMALDVYNG PYA+CH+ EL
Sbjct: 65 QPGVLVKDILSHMKNATQPSNRRKLIMYSAHDTTVSALQMALDVYNGILPPYASCHLMEL 124
Query: 982 YQEDNGNFSVEMYFRNESDKAPWPLILPGCPHRCPLQDFLRLTEPVIPKDWQQECQLASG 1161
Y E G + VEMY+RNE+ P PL LPGC CPL+ F L PVIP+DW EC +S
Sbjct: 125 YFE-KGEYFVEMYYRNETWHEPHPLTLPGCTPSCPLKKFAELVAPVIPQDWSAECATSSH 183
Query: 1162 PADTEVI 1182
+V+
Sbjct: 184 EGTKDVM 190
>ref|XP_003358603.1| PREDICTED: prostatic acid phosphatase-like [Sus scrofa].
Length = 145
Score = 124 bits (311), Expect = 1e-28
Identities = 62/124 (50%), Positives = 79/124 (63%)
Frame = +1
Query: 811 VLLAQIRKNLTLMATTSQLPKLLVYSAHDTTLVALQMALDVYNGEQAPYAACHIFELYQE 990
VL+ I ++ S KL++YSAHDTT+ ALQMALDVYNG PYA+CH+ ELY E
Sbjct: 22 VLVKDILSHMKNATQPSNRRKLIMYSAHDTTVSALQMALDVYNGILPPYASCHLMELYFE 81
Query: 991 DNGNFSVEMYFRNESDKAPWPLILPGCPHRCPLQDFLRLTEPVIPKDWQQECQLASGPAD 1170
G + VEMY+RNE+ P PL LPGC CPL+ F L PVIP+DW EC ++
Sbjct: 82 -KGEYFVEMYYRNETWHEPHPLTLPGCTPSCPLKKFAELVAPVIPQDWSAECATSNHEGT 140
Query: 1171 TEVI 1182
+V+
Sbjct: 141 KDVM 144
>ref|XP_001928381.3| PREDICTED: lysophosphatidic acid phosphatase type 6 isoform 1 [Sus
scrofa].
Length = 428
Score = 95.9 bits (237), Expect = 5e-20
Identities = 102/377 (27%), Positives = 157/377 (41%), Gaps = 54/377 (14%)
Frame = +1
Query: 133 LRFVTLLYRHGDRSPVKTYPKDP------------------------------------- 201
L+ V +++RHG RSP+K P++
Sbjct: 50 LKMVQVVFRHGARSPLKPLPQEEQVEWKPQLLEVPPQTQFDYTVTNLVGGPKPHSPFDSQ 109
Query: 202 YQEDKWPQGF--GQLTKEGMLQHWELGRALRQRYLG---FLNTSYHRQEVYVRSTDFDRT 366
YQ+ G GQLTK GM Q + LG LR++Y+ FL+ +++ EV++RST+ R
Sbjct: 110 YQKTTLKGGVFAGQLTKVGMQQMFALGERLRKKYVEDTPFLSPTFNPVEVFIRSTNIYRN 169
Query: 367 LMSAEANLAGLFPPNGMQRFNPNISWQPIPVHTVPVTEDRLLKFPLGPCPRFEQ---LQN 537
L S LAGLF QR PI +HT + + L P ++ LQ
Sbjct: 170 LESTRCLLAGLF-----QRQKEG----PIVIHTDEASSEVLY-------PNYQNCWSLQE 213
Query: 538 ETRRTPEYQNESIQNAQFLEMVANETGLTDLTLETVWNVYDTLFCEQTHGLVLPPWASPQ 717
TR + ++ LE V G+ ++D + EQ H L P
Sbjct: 214 RTRGRKQAAALQPGISEDLETVKEGMGIASGDRVDFLILFDNVAAEQVHSLPSCP----- 268
Query: 718 TMQRLSRL---KDFSFRFLFGIYEQAEKARLQGGVLLAQIRKNLTLMAT----TSQLPKL 876
T++R +R+ + E E ++ G L + NL A + + KL
Sbjct: 269 TLRRFARMIERRAVDTALYILQREDREGLQMAVGPFLHILESNLLKAADPATPSGKTRKL 328
Query: 877 LVYSAHDTTLVALQMALDVYNGEQAPYAACHIFELYQ-EDNGNFSVEMYFRNESDKAPWP 1053
+Y+AHD TL+ L M L +++ + P+A ELYQ + + V++Y+ E
Sbjct: 329 YLYAAHDVTLMPLLMVLGIFDHKWPPFAVDLTMELYQHRKSKEWFVQLYYHGEEQ----- 383
Query: 1054 LILPGCPHR-CPLQDFL 1101
+ GCP R CPL FL
Sbjct: 384 -VPKGCPDRLCPLDKFL 399
>ref|XP_003132500.2| PREDICTED: acid phosphatase-like protein 2 [Sus scrofa].
Length = 479
Score = 55.8 bits (133), Expect = 6e-08
Identities = 71/282 (25%), Positives = 110/282 (39%), Gaps = 14/282 (4%)
Frame = +1
Query: 187 YPKDPYQEDKWPQGFGQLTKEGMLQHWELGRALRQRYLG---FLNTSYHRQEVYVRSTDF 357
YP P E G+LT+ G++QH + G+ LR YL L + ++Y+ +T
Sbjct: 154 YPSHPLCE------MGELTQTGVVQHLQNGQLLRDIYLKKHKLLPGDWSTDQLYLETTGK 207
Query: 358 DRTLMSAEANLAGLFPPNGMQRFNPNISWQPIPVHTVPVTEDRLLKFPLGPC---PRFEQ 528
RTL S A L G F P+ W+ I P F G C R +
Sbjct: 208 SRTLQSGLALLYG---------FLPDFDWKKIYFRHQPSA-----LFCSGNCYCPVRNQY 253
Query: 529 LQNETRRTPEYQNESIQNAQFLEMVANETGLTDLTLETVW--NVYDTLFCEQTHGLVLPP 702
L+ E RR + ++N+Q + + D+ + + N D++ C H + P
Sbjct: 254 LEKEQRRQYLLR---LKNSQLEKTYGEMARIVDIPTKQLRAANPIDSMLCHFCHNVSFP- 309
Query: 703 WASPQTMQRLSRLKDFSFRFLFGIYEQAEKARLQGGVLLA------QIRKNLTLMATTSQ 864
+ + K + E+ EK G LL Q + A +
Sbjct: 310 -CTKNGCIDMEHFKVIKMHQIEDERERQEKKLYLGYALLGAHPILNQTVGRMQRAAEGRR 368
Query: 865 LPKLLVYSAHDTTLVALQMALDVYNGEQAPYAACHIFELYQE 990
+YSAHD TL + AL + +AA IFEL+Q+
Sbjct: 369 EELFALYSAHDVTLSPVLSALGLTEARFPRFAARLIFELWQD 410
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 41,231,562
Number of extensions: 1209411
Number of successful extensions: 4525
Number of sequences better than 1.0e-05: 9
Number of HSP's gapped: 4503
Number of HSP's successfully gapped: 11
Length of query: 511
Length of database: 11,343,932
Length adjustment: 103
Effective length of query: 408
Effective length of database: 8,779,541
Effective search space: 3582052728
Effective search space used: 3582052728
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-003186
(1535 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr02 666 0.0
gb|GL893675.2| Sus scrofa unplaced genomic scaffold ChrUScaf1560 456 e-125
>Sscrofa_Chr02
|| Length = 162569375
Score = 666 bits (336), Expect = 0.0
Identities = 359/364 (98%), Gaps = 2/364 (0%)
Strand = Plus / Plus
Query: 1172 cagaggtgatcgtggccttggctgtgtgtggctccatcctcttccttctcatagtgctgc 1231
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16565162 cagaggtgatcgtggccttggctgtgtgtggctccatcctcttccttctcatagtgctgc 16565221
Query: 1232 tcctcaccgtcctcttccggatgcaggcccagcctcccgggtaccgccacgtcgcagatg 1291
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16565222 tcctcaccgtcctcttccggatgcaggcccagcctcccgggtaccgccacgtcgcagatg 16565281
Query: 1292 gggaagatcatgcctgacaaccactcagccccctcccctccacctcttaggagaggtggc 1351
||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||
Sbjct: 16565282 gggaagatcatgcctgacaaccactcagccccctcccctccgcctcctaggagaggtggg 16565341
Query: 1352 ctgggcccttgttcctcaccattgctgctccccagcccatgcacaggagacccctgggtt 1411
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 16565342 ctgggcccttgttcctcaccattgctgctccccagcccatgcacaggaga-ccctgggtt 16565400
Query: 1412 gggcctccctctgatttccccagcctagatgaacaattggggctcagcttggcccatggc 1471
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16565401 gggcctccctctgatttccccagcctagatgaacaattggggctcagcttggcccatggc 16565460
Query: 1472 acctgtcactcagcattcatgtgcctgatgtttaccaagtacccgtgttggacatcagct 1531
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 16565461 acctgtcactcagcattcatgtgcctgatgtttaccaagta-ccgtgttggacatcagct 16565519
Query: 1532 ctct 1535
||||
Sbjct: 16565520 ctct 16565523
Score = 351 bits (177), Expect = 7e-94
Identities = 177/177 (100%)
Strand = Plus / Plus
Query: 998 ggaatttctcagtggagatgtactttcggaatgagagtgacaaggccccctggccgctga 1057
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16562004 ggaatttctcagtggagatgtactttcggaatgagagtgacaaggccccctggccgctga 16562063
Query: 1058 tcctgcccggctgccctcaccgctgcccgctgcaggacttccttcgcctcaccgagcctg 1117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16562064 tcctgcccggctgccctcaccgctgcccgctgcaggacttccttcgcctcaccgagcctg 16562123
Query: 1118 tcatacccaaggattggcagcaggagtgccagctggcaagtggtcctgcagacacag 1174
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16562124 tcatacccaaggattggcagcaggagtgccagctggcaagtggtcctgcagacacag 16562180
Score = 307 bits (155), Expect = 1e-80
Identities = 155/155 (100%)
Strand = Plus / Plus
Query: 332 aggtttatgttcgaagcacagactttgaccggactctcatgagtgctgaggccaacttgg 391
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16559692 aggtttatgttcgaagcacagactttgaccggactctcatgagtgctgaggccaacttgg 16559751
Query: 392 ctggactcttcccccctaatgggatgcagcgctttaatccaaacatctcttggcagccta 451
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16559752 ctggactcttcccccctaatgggatgcagcgctttaatccaaacatctcttggcagccta 16559811
Query: 452 ttcctgtccatactgtgcctgttaccgaggacaga 486
|||||||||||||||||||||||||||||||||||
Sbjct: 16559812 ttcctgtccatactgtgcctgttaccgaggacaga 16559846
Score = 287 bits (145), Expect = 9e-75
Identities = 145/145 (100%)
Strand = Plus / Plus
Query: 6 cagcccttctgctgtctagactgcagcggtgatggcgggcagacagtttggctggaggca 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16557578 cagcccttctgctgtctagactgcagcggtgatggcgggcagacagtttggctggaggca 16557637
Query: 66 gccggctctactccagctccttcttggtgtgaacctgatggtgatgccacctatccaggc 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16557638 gccggctctactccagctccttcttggtgtgaacctgatggtgatgccacctatccaggc 16557697
Query: 126 ccggagtctgcgcttcgttaccttg 150
|||||||||||||||||||||||||
Sbjct: 16557698 ccggagtctgcgcttcgttaccttg 16557722
Score = 270 bits (136), Expect = 2e-69
Identities = 136/136 (100%)
Strand = Plus / Plus
Query: 674 agcagacacacgggctggtcctgcctccctgggcctcaccccaaaccatgcagcgtctga 733
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16560664 agcagacacacgggctggtcctgcctccctgggcctcaccccaaaccatgcagcgtctga 16560723
Query: 734 gccggctaaaggacttcagcttccgcttcctcttcgggatctacgagcaggcagagaagg 793
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16560724 gccggctaaaggacttcagcttccgcttcctcttcgggatctacgagcaggcagagaagg 16560783
Query: 794 cccggctgcagggggg 809
||||||||||||||||
Sbjct: 16560784 cccggctgcagggggg 16560799
Score = 216 bits (109), Expect = 3e-53
Identities = 109/109 (100%)
Strand = Plus / Plus
Query: 891 gcatgacaccaccctggttgccctgcaaatggcactggatgtctacaacggtgaacaagc 950
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16561775 gcatgacaccaccctggttgccctgcaaatggcactggatgtctacaacggtgaacaagc 16561834
Query: 951 tccctatgcggcctgccacatatttgaactgtaccaggaagataatggg 999
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16561835 tccctatgcggcctgccacatatttgaactgtaccaggaagataatggg 16561883
Score = 196 bits (99), Expect = 3e-47
Identities = 99/99 (100%)
Strand = Plus / Plus
Query: 487 ctgctgaagttcccgttgggcccatgtccccgttttgagcagctgcagaacgagacccgg 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16559955 ctgctgaagttcccgttgggcccatgtccccgttttgagcagctgcagaacgagacccgg 16560014
Query: 547 cggacaccagagtatcagaatgagagtattcagaatgca 585
|||||||||||||||||||||||||||||||||||||||
Sbjct: 16560015 cggacaccagagtatcagaatgagagtattcagaatgca 16560053
Score = 194 bits (98), Expect = 1e-46
Identities = 98/98 (100%)
Strand = Plus / Plus
Query: 150 gctgtaccgacatggagaccgctcgccagtaaagacatatcccaaggacccctatcaaga 209
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16558338 gctgtaccgacatggagaccgctcgccagtaaagacatatcccaaggacccctatcaaga 16558397
Query: 210 agacaaatggccccagggctttggtcagctaaccaagg 247
||||||||||||||||||||||||||||||||||||||
Sbjct: 16558398 agacaaatggccccagggctttggtcagctaaccaagg 16558435
Score = 180 bits (91), Expect = 2e-42
Identities = 91/91 (100%)
Strand = Plus / Plus
Query: 245 aggaggggatgctacagcactgggagctgggccgggctctgcgacagcgataccttggct 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16558744 aggaggggatgctacagcactgggagctgggccgggctctgcgacagcgataccttggct 16558803
Query: 305 ttctgaacacctcctaccaccggcaagaggt 335
|||||||||||||||||||||||||||||||
Sbjct: 16558804 ttctgaacacctcctaccaccggcaagaggt 16558834
Score = 178 bits (90), Expect = 6e-42
Identities = 90/90 (100%)
Strand = Plus / Plus
Query: 586 caatttctggaaatggtggccaacgagacagggcttacggacctgacactggagaccgtc 645
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16560134 caatttctggaaatggtggccaacgagacagggcttacggacctgacactggagaccgtc 16560193
Query: 646 tggaatgtctatgacacactcttctgtgag 675
||||||||||||||||||||||||||||||
Sbjct: 16560194 tggaatgtctatgacacactcttctgtgag 16560223
Score = 167 bits (84), Expect = 2e-38
Identities = 84/84 (100%)
Strand = Plus / Plus
Query: 808 ggagtcctgctggcccagatacggaagaacctgaccctgatggcaaccacctcccagctc 867
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16561577 ggagtcctgctggcccagatacggaagaacctgaccctgatggcaaccacctcccagctc 16561636
Query: 868 cccaagctgctggtctactcagcg 891
||||||||||||||||||||||||
Sbjct: 16561637 cccaagctgctggtctactcagcg 16561660
>gb|GL893675.2| Sus scrofa unplaced genomic scaffold ChrUScaf1560
Length = 118150
Score = 456 bits (230), Expect = e-125
Identities = 253/258 (98%), Gaps = 2/258 (0%)
Strand = Plus / Minus
Query: 1278 ccacgtcgcagatggggaagatcatgcctgacaaccactcagccccctcccctccacctc 1337
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 104490 ccacgtcgcagatggggaagatcatgcctgacaaccactcagccccctcccctccgcctc 104431
Query: 1338 ttaggagaggtggcctgggcccttgttcctcaccattgctgctccccagcccatgcacag 1397
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104430 ctaggagaggtgggctgggcccttgttcctcaccattgctgctccccagcccatgcacag 104371
Query: 1398 gagacccctgggttgggcctccctctgatttccccagcctagatgaacaattggggctca 1457
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104370 gaga-ccctgggttgggcctccctctgatttccccagcctagatgaacaattggggctca 104312
Query: 1458 gcttggcccatggcacctgtcactcagcattcatgtgcctgatgtttaccaagtacccgt 1517
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 104311 gcttggcccatggcacctgtcactcagcattcatgtgcctgatgtttaccaagta-ccgt 104253
Query: 1518 gttggacatcagctctct 1535
||||||||||||||||||
Sbjct: 104252 gttggacatcagctctct 104235
Score = 351 bits (177), Expect = 7e-94
Identities = 177/177 (100%)
Strand = Plus / Minus
Query: 998 ggaatttctcagtggagatgtactttcggaatgagagtgacaaggccccctggccgctga 1057
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107761 ggaatttctcagtggagatgtactttcggaatgagagtgacaaggccccctggccgctga 107702
Query: 1058 tcctgcccggctgccctcaccgctgcccgctgcaggacttccttcgcctcaccgagcctg 1117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107701 tcctgcccggctgccctcaccgctgcccgctgcaggacttccttcgcctcaccgagcctg 107642
Query: 1118 tcatacccaaggattggcagcaggagtgccagctggcaagtggtcctgcagacacag 1174
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107641 tcatacccaaggattggcagcaggagtgccagctggcaagtggtcctgcagacacag 107585
Score = 307 bits (155), Expect = 1e-80
Identities = 155/155 (100%)
Strand = Plus / Minus
Query: 332 aggtttatgttcgaagcacagactttgaccggactctcatgagtgctgaggccaacttgg 391
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110092 aggtttatgttcgaagcacagactttgaccggactctcatgagtgctgaggccaacttgg 110033
Query: 392 ctggactcttcccccctaatgggatgcagcgctttaatccaaacatctcttggcagccta 451
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110032 ctggactcttcccccctaatgggatgcagcgctttaatccaaacatctcttggcagccta 109973
Query: 452 ttcctgtccatactgtgcctgttaccgaggacaga 486
|||||||||||||||||||||||||||||||||||
Sbjct: 109972 ttcctgtccatactgtgcctgttaccgaggacaga 109938
Score = 270 bits (136), Expect = 2e-69
Identities = 136/136 (100%)
Strand = Plus / Minus
Query: 674 agcagacacacgggctggtcctgcctccctgggcctcaccccaaaccatgcagcgtctga 733
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109101 agcagacacacgggctggtcctgcctccctgggcctcaccccaaaccatgcagcgtctga 109042
Query: 734 gccggctaaaggacttcagcttccgcttcctcttcgggatctacgagcaggcagagaagg 793
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109041 gccggctaaaggacttcagcttccgcttcctcttcgggatctacgagcaggcagagaagg 108982
Query: 794 cccggctgcagggggg 809
||||||||||||||||
Sbjct: 108981 cccggctgcagggggg 108966
Score = 216 bits (109), Expect = 3e-53
Identities = 109/109 (100%)
Strand = Plus / Minus
Query: 891 gcatgacaccaccctggttgccctgcaaatggcactggatgtctacaacggtgaacaagc 950
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107990 gcatgacaccaccctggttgccctgcaaatggcactggatgtctacaacggtgaacaagc 107931
Query: 951 tccctatgcggcctgccacatatttgaactgtaccaggaagataatggg 999
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107930 tccctatgcggcctgccacatatttgaactgtaccaggaagataatggg 107882
Score = 196 bits (99), Expect = 3e-47
Identities = 99/99 (100%)
Strand = Plus / Minus
Query: 487 ctgctgaagttcccgttgggcccatgtccccgttttgagcagctgcagaacgagacccgg 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109825 ctgctgaagttcccgttgggcccatgtccccgttttgagcagctgcagaacgagacccgg 109766
Query: 547 cggacaccagagtatcagaatgagagtattcagaatgca 585
|||||||||||||||||||||||||||||||||||||||
Sbjct: 109765 cggacaccagagtatcagaatgagagtattcagaatgca 109727
Score = 194 bits (98), Expect = 1e-46
Identities = 98/98 (100%)
Strand = Plus / Minus
Query: 150 gctgtaccgacatggagaccgctcgccagtaaagacatatcccaaggacccctatcaaga 209
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111446 gctgtaccgacatggagaccgctcgccagtaaagacatatcccaaggacccctatcaaga 111387
Query: 210 agacaaatggccccagggctttggtcagctaaccaagg 247
||||||||||||||||||||||||||||||||||||||
Sbjct: 111386 agacaaatggccccagggctttggtcagctaaccaagg 111349
Score = 180 bits (91), Expect = 2e-42
Identities = 91/91 (100%)
Strand = Plus / Minus
Query: 245 aggaggggatgctacagcactgggagctgggccgggctctgcgacagcgataccttggct 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111040 aggaggggatgctacagcactgggagctgggccgggctctgcgacagcgataccttggct 110981
Query: 305 ttctgaacacctcctaccaccggcaagaggt 335
|||||||||||||||||||||||||||||||
Sbjct: 110980 ttctgaacacctcctaccaccggcaagaggt 110950
Score = 178 bits (90), Expect = 6e-42
Identities = 90/90 (100%)
Strand = Plus / Minus
Query: 586 caatttctggaaatggtggccaacgagacagggcttacggacctgacactggagaccgtc 645
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109646 caatttctggaaatggtggccaacgagacagggcttacggacctgacactggagaccgtc 109587
Query: 646 tggaatgtctatgacacactcttctgtgag 675
||||||||||||||||||||||||||||||
Sbjct: 109586 tggaatgtctatgacacactcttctgtgag 109557
Score = 167 bits (84), Expect = 2e-38
Identities = 84/84 (100%)
Strand = Plus / Minus
Query: 1172 cagaggtgatcgtggccttggctgtgtgtggctccatcctcttccttctcatagtgctgc 1231
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104674 cagaggtgatcgtggccttggctgtgtgtggctccatcctcttccttctcatagtgctgc 104615
Query: 1232 tcctcaccgtcctcttccggatgc 1255
||||||||||||||||||||||||
Sbjct: 104614 tcctcaccgtcctcttccggatgc 104591
Score = 167 bits (84), Expect = 2e-38
Identities = 84/84 (100%)
Strand = Plus / Minus
Query: 808 ggagtcctgctggcccagatacggaagaacctgaccctgatggcaaccacctcccagctc 867
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108188 ggagtcctgctggcccagatacggaagaacctgaccctgatggcaaccacctcccagctc 108129
Query: 868 cccaagctgctggtctactcagcg 891
||||||||||||||||||||||||
Sbjct: 108128 cccaagctgctggtctactcagcg 108105
Score = 153 bits (77), Expect = 3e-34
Identities = 77/77 (100%)
Strand = Plus / Minus
Query: 68 cggctctactccagctccttcttggtgtgaacctgatggtgatgccacctatccaggccc 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 112202 cggctctactccagctccttcttggtgtgaacctgatggtgatgccacctatccaggccc 112143
Query: 128 ggagtctgcgcttcgtt 144
|||||||||||||||||
Sbjct: 112142 ggagtctgcgcttcgtt 112126
Score = 81.8 bits (41), Expect = 1e-12
Identities = 41/41 (100%)
Strand = Plus / Minus
Query: 6 cagcccttctgctgtctagactgcagcggtgatggcgggca 46
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 112343 cagcccttctgctgtctagactgcagcggtgatggcgggca 112303
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 41,396,954
Number of extensions: 295
Number of successful extensions: 295
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 291
Number of HSP's successfully gapped: 24
Length of query: 1535
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1514
Effective length of database: 2,808,413,156
Effective search space: 4251937518184
Effective search space used: 4251937518184
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)