Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-003231
(981 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001039937.1| G-protein coupled receptor 183 [Bos taurus]. 473 e-134
Alignment gi|NP_001094754.1| lysophosphatidic acid receptor 6 [Bos taurus]. 124 2e-28
Alignment gi|NP_001095710.1| cysteinyl leukotriene receptor 2 [Bos taurus]. 117 1e-26
Alignment gi|NP_001033622.2| proteinase-activated receptor 3 precursor [B... 117 2e-26
Alignment gi|NP_001093196.1| cysteinyl leukotriene receptor 1 [Bos taurus]. 117 2e-26
Alignment gi|NP_001091574.1| lysophosphatidic acid receptor 4 [Bos taurus]. 115 8e-26
Alignment gi|XP_002692009.1| PREDICTED: purinergic receptor P2Y, G-protei... 114 2e-25
Alignment gi|XP_586409.1| PREDICTED: purinergic receptor P2Y, G-protein c... 114 2e-25
Alignment gi|NP_001075939.1| uracil nucleotide/cysteinyl leukotriene rece... 112 4e-25
Alignment gi|NP_001098912.1| G-protein coupled receptor 183 [Bos taurus]. 111 1e-24
>ref|NP_001039937.1| G-protein coupled receptor 183 [Bos taurus].
Length = 360
Score = 473 bits (1218), Expect = e-134
Identities = 239/301 (79%), Positives = 248/301 (82%)
Frame = +3
Query: 78 DIKMDNFTTPSQAPQESDCDLYAHHDTARILMPLHYSIVFXXXXXXXXXXXXXXXQNRKK 257
DIKMDNFTTPS A ESDCDLYAHH TARILMPLHYSIVF QNRKK
Sbjct: 2 DIKMDNFTTPSAASLESDCDLYAHHHTARILMPLHYSIVFIIGLVGNLLALIVIIQNRKK 61
Query: 258 INSTTLYSTNLVISDILFTTALPTRIAYYALGFDWRIGEALCRITALVFYINTYAGVNFM 437
INSTTLYSTNLVISDILFTTALPTRIAYYALGFDWRIG+ALCRITALVFYINTYAGVNFM
Sbjct: 62 INSTTLYSTNLVISDILFTTALPTRIAYYALGFDWRIGDALCRITALVFYINTYAGVNFM 121
Query: 438 TCLSIDRFFAVVHPLRYNKIKRIEHAKCICICVWILVFAQTLPLLIKPMSKQEAKRTTCM 617
TCLSIDRFFAVVHPLRYNKIKRIEHAKCICI VWILVF QTLPLLI PMSKQEA+RTTCM
Sbjct: 122 TCLSIDRFFAVVHPLRYNKIKRIEHAKCICIFVWILVFGQTLPLLINPMSKQEAERTTCM 181
Query: 618 EYPNFEETQSLPWILLGACFIGYVLPLLIILICYSQICCKLFKTAKQNPLTEKSGVNKKA 797
EYPNFEET+SLPWILLGACFIGYVLPL+IILICYSQICCKLFKTAKQNPLTEKSGVNKKA
Sbjct: 182 EYPNFEETKSLPWILLGACFIGYVLPLVIILICYSQICCKLFKTAKQNPLTEKSGVNKKA 241
Query: 798 LNTIIFINVGFVVGFXXXXXXXXXXXXRSFIFLTFGNVVKKNSFQIALPITGCLKKFNCC 977
LNTIIFI V FVV F + +++SFQI+L T CL FNCC
Sbjct: 242 LNTIIFIIVVFVVCFTPYHVAIIQHMIKKLRLPGLLECSQRHSFQISLHFTVCLMNFNCC 301
Query: 978 M 980
M
Sbjct: 302 M 302
>ref|NP_001094754.1| lysophosphatidic acid receptor 6 [Bos taurus].
Length = 341
Score = 124 bits (310), Expect = 2e-28
Identities = 70/239 (29%), Positives = 114/239 (47%)
Frame = +3
Query: 261 NSTTLYSTNLVISDILFTTALPTRIAYYALGFDWRIGEALCRITALVFYINTYAGVNFMT 440
N TT Y NL +SD+LF LP RI Y+A +W G+ LC+I+ + FY N Y + F+T
Sbjct: 50 NETTTYMINLAMSDLLFVFTLPFRIFYFATR-NWPFGDLLCKISVMSFYTNMYGSILFLT 108
Query: 441 CLSIDRFFAVVHPLRYNKIKRIEHAKCICICVWILVFAQTLPLLIKPMSKQEAKRTTCME 620
C+S DRF A+V+P + ++ +AK +CI VW+ V + P + P T
Sbjct: 109 CISADRFLAIVYPFKSKTLRTKRNAKIVCIAVWLTVMGGSAPAVFVPSPGSNTSATCFEN 168
Query: 621 YPNFEETQSLPWILLGACFIGYVLPLLIILICYSQICCKLFKTAKQNPLTEKSGVNKKAL 800
+P L I++ +G+ +PL++ + C S + +T + +S +NK +
Sbjct: 169 FPAATWKTFLSRIVIFIEIVGFFIPLILNVTCSSMV----LRTLNKPVTLSRSKINKTKV 224
Query: 801 NTIIFINVGFVVGFXXXXXXXXXXXXRSFIFLTFGNVVKKNSFQIALPITGCLKKFNCC 977
+IF+++ + F TF N + + PIT C+ NCC
Sbjct: 225 LRMIFVHL-VIFCFCFVPYNINLILYSLMRTQTFVNCSAAIAVRTTYPITLCIAVLNCC 282
>ref|NP_001095710.1| cysteinyl leukotriene receptor 2 [Bos taurus].
Length = 367
Score = 117 bits (294), Expect = 1e-26
Identities = 86/298 (28%), Positives = 131/298 (43%), Gaps = 8/298 (2%)
Frame = +3
Query: 108 SQAPQESDCDLYAHH--------DTARILMPLHYSIVFXXXXXXXXXXXXXXXQNRKKIN 263
S + E++ HH D R P+ Y ++F Q +K
Sbjct: 13 SASEMETNSTFSDHHSNRNCTAEDFKREFYPIVYLVIFIWGALGNGFSIYVFVQPYRKST 72
Query: 264 STTLYSTNLVISDILFTTALPTRIAYYALGFDWRIGEALCRITALVFYINTYAGVNFMTC 443
S ++ NL SD+LFT LP R+ YY G +W G+ CRI + Y+N Y+ + F+T
Sbjct: 73 SVNIFMLNLATSDLLFTATLPFRVDYYLRGSNWIFGDLSCRIMSYSMYVNMYSSIYFLTV 132
Query: 444 LSIDRFFAVVHPLRYNKIKRIEHAKCICICVWILVFAQTLPLLIKPMSKQEAKRTTCMEY 623
LS+ RF A VHP R + +A +C +WI + A + LL S+ + T C+E
Sbjct: 133 LSVVRFLATVHPFRLLHATSVRNAWIVCGIIWIFIMASSTTLL-NNGSELKGNVTLCLEL 191
Query: 624 PNFEETQSLPWILLGACFIGYVLPLLIILICYSQICCKLFKTAKQNPLTEKSGVNKKALN 803
N + L + A +G++LP + ICY I L K + P ++KAL
Sbjct: 192 -NRNKAPKLKTMNYIALVVGFLLPFCTLSICYMLIIRALLKA--EVPELGLRLSHRKALT 248
Query: 804 TIIFINVGFVVGFXXXXXXXXXXXXRSFIFLTFGNVVKKNSFQIALPITGCLKKFNCC 977
TII V F++ F R+ L + + ++S A+ IT L N C
Sbjct: 249 TIIIALVIFLLCF------LPYHILRTLHLLQWTADICRDSLHKAVAITLALAAANSC 300
>ref|NP_001033622.2| proteinase-activated receptor 3 precursor [Bos taurus].
Length = 377
Score = 117 bits (292), Expect = 2e-26
Identities = 69/222 (31%), Positives = 108/222 (48%), Gaps = 12/222 (5%)
Frame = +3
Query: 99 TTPSQAPQESDCDLYAHHDT--------ARILMPLHYSIVFXXXXXXXXXXXXXXXQNRK 254
T + P+E D +L+ ++ T + L+P Y +VF + R
Sbjct: 65 TVKIKCPEELDSNLHVNNATMGYLSSPLSTKLIPAIYILVFAVGMPANAVTLWMLFRTRT 124
Query: 255 KINSTTLYSTNLVISDILFTTALPTRIAYYALGFDWRIGEALCRITALVFYINTYAGVNF 434
T++ TNL I+D LF LP RIAY+ G +W GE +CR T ++FY N Y +
Sbjct: 125 I--RMTIFYTNLAIADFLFCVTLPFRIAYHLNGNNWVFGEVMCRATTVIFYGNMYCSILL 182
Query: 435 MTCLSIDRFFAVVHPLRYNKIKRIEHAKCICICVWILVFAQTLPLLIKPMSKQEAKR--T 608
+ C+SI+R+ A+VHP Y + + +A C VW VF LP I ++ T
Sbjct: 183 LACISINRYLAIVHPFTYRGLPKRTYALLTCGLVWTTVFLYMLPFFILKQEYYLVQQDIT 242
Query: 609 TCMEYPNFEETQS--LPWILLGACFIGYVLPLLIILICYSQI 728
TC + N E+ S + + F G+++P L+I+ CY+ I
Sbjct: 243 TCHDVHNTCESSSPFQLYYFISLAFFGFLIPFLVIIYCYTAI 284
>ref|NP_001093196.1| cysteinyl leukotriene receptor 1 [Bos taurus].
Length = 340
Score = 117 bits (292), Expect = 2e-26
Identities = 58/193 (30%), Positives = 102/193 (52%), Gaps = 3/193 (1%)
Frame = +3
Query: 273 LYSTNLVISDILFTTALPTRIAYYALGFDWRIGEALCRITALVFYINTYAGVNFMTCLSI 452
+Y NL ++D+L LP R+ YY W G+ LCR++ Y+N Y + FMT +S
Sbjct: 63 VYMINLAVADLLCVCTLPLRVVYYVHKGIWLFGDFLCRLSTYALYVNLYCSIFFMTAMSF 122
Query: 453 DRFFAVVHPLRYNKIKRIEHAKCICICVWILVFAQTLPLLIKPMSKQEAKRTTCMEYPNF 632
R A+V P++ + + A+ +C+ +WI V + P L+ K T C E P
Sbjct: 123 FRCIAIVFPVQNINLVTQKKARFVCVGIWIFVILTSSPFLMSKSYKDAKNNTKCFEPP-- 180
Query: 633 EETQSLPWILL---GACFIGYVLPLLIILICYSQICCKLFKTAKQNPLTEKSGVNKKALN 803
++ Q+ ++L+ + F G+++P +II++CY+ I L K + + L+ + KKA+
Sbjct: 181 QDNQAKYYVLVLHYVSLFFGFIIPFIIIIVCYTMIILTLLKKSMKKNLSSR----KKAIG 236
Query: 804 TIIFINVGFVVGF 842
II + F++ F
Sbjct: 237 MIIVVTAAFLISF 249
>ref|NP_001091574.1| lysophosphatidic acid receptor 4 [Bos taurus].
Length = 370
Score = 115 bits (287), Expect = 8e-26
Identities = 78/274 (28%), Positives = 125/274 (45%), Gaps = 9/274 (3%)
Frame = +3
Query: 183 YSIVFXXXXXXXXXXXXXXXQNRKKINSTTLYSTNLVISDILFTTALPTRIAYYALGFDW 362
YS+VF K + T ++ TNL +SD+LF LP +I +Y W
Sbjct: 46 YSVVFILGLITNSASLFVFCFRMKMRSETAIFITNLALSDLLFVCTLPFKI-FYNFNRHW 104
Query: 363 RIGEALCRITALVFYINTYAGVNFMTCLSIDRFFAVVHPLRYNKIKRIEHAKCICICVWI 542
G+ LC+I+ F N Y + F+TC+S+DRF A+V+P R I+ ++ +C VWI
Sbjct: 105 PFGDTLCKISGTAFLTNIYGSMLFLTCISVDRFLAIVYPFRSRTIRTRRNSAIVCAGVWI 164
Query: 543 LVFAQTLPLLIKPMSKQEAKRTTCME-YPNFEETQSLPWILLGACFIGYVLPLLIILICY 719
LV + + + + TTC E + L I + +G+++PL++ + C
Sbjct: 165 LVLSGGISASLFSTTNVNNATTTCFEGFSKRVWKTYLSKITIFIEVVGFIIPLILNVSCS 224
Query: 720 SQICCKLFKTAKQNPLTEKSGVNKKALNTIIFINVG-FVVGFXXXXXXXXXXXXRSFIFL 896
S + KT ++ + G NKK + +I +++ FVV F S +FL
Sbjct: 225 SVV----LKTLRKPATLSQIGTNKKKVLKMITVHMAVFVVCF---------VPYNSVLFL 271
Query: 897 -------TFGNVVKKNSFQIALPITGCLKKFNCC 977
N + + +I PIT CL NCC
Sbjct: 272 YALVRSQAITNCLLERFAKIMYPITLCLATLNCC 305
>ref|XP_002692009.1| PREDICTED: purinergic receptor P2Y, G-protein coupled 1-like [Bos
taurus].
Length = 337
Score = 114 bits (284), Expect = 2e-25
Identities = 60/221 (27%), Positives = 104/221 (47%)
Frame = +3
Query: 171 MPLHYSIVFXXXXXXXXXXXXXXXQNRKKINSTTLYSTNLVISDILFTTALPTRIAYYAL 350
+P+ YSI+F + S+T+ NL +D+L+ T+LP I YYA
Sbjct: 36 LPVIYSIIFLVGFPGNVIAISTYIFKMRPWRSSTIIMLNLACTDLLYLTSLPFLIHYYAG 95
Query: 351 GFDWRIGEALCRITALVFYINTYAGVNFMTCLSIDRFFAVVHPLRYNKIKRIEHAKCICI 530
G W G+ +C+ F+ N Y+ + F+TC SI R+F ++HP + + A C+
Sbjct: 96 GDHWVFGDFMCKFIRFGFHFNLYSSILFLTCFSIFRYFVIIHPTSCFSVHKKRWAMVACV 155
Query: 531 CVWILVFAQTLPLLIKPMSKQEAKRTTCMEYPNFEETQSLPWILLGACFIGYVLPLLIIL 710
VWI+ +P+ + R+TC++ + ++ ++ W L + LPL+I+
Sbjct: 156 VVWIVSLVAVIPMTFLITATTSTNRSTCLDLTSSDDLTTIKWYNLILTTTTFCLPLVIVT 215
Query: 711 ICYSQICCKLFKTAKQNPLTEKSGVNKKALNTIIFINVGFV 833
+CY+ I T Q P T K TI+ + V ++
Sbjct: 216 LCYTMI----IYTLTQGPQTHSCLKQKARRLTILLLLVFYI 252
>ref|XP_586409.1| PREDICTED: purinergic receptor P2Y, G-protein coupled 1-like [Bos
taurus].
Length = 337
Score = 114 bits (284), Expect = 2e-25
Identities = 60/221 (27%), Positives = 104/221 (47%)
Frame = +3
Query: 171 MPLHYSIVFXXXXXXXXXXXXXXXQNRKKINSTTLYSTNLVISDILFTTALPTRIAYYAL 350
+P+ YSI+F + S+T+ NL +D+L+ T+LP I YYA
Sbjct: 36 LPVIYSIIFLVGFPGNVIAISTYIFKMRPWRSSTIIMLNLACTDLLYLTSLPFLIHYYAG 95
Query: 351 GFDWRIGEALCRITALVFYINTYAGVNFMTCLSIDRFFAVVHPLRYNKIKRIEHAKCICI 530
G W G+ +C+ F+ N Y+ + F+TC SI R+F ++HP + + A C+
Sbjct: 96 GDHWVFGDFMCKFIRFGFHFNLYSSILFLTCFSIFRYFVIIHPTSCFSVHKKRWAMVACV 155
Query: 531 CVWILVFAQTLPLLIKPMSKQEAKRTTCMEYPNFEETQSLPWILLGACFIGYVLPLLIIL 710
VWI+ +P+ + R+TC++ + ++ ++ W L + LPL+I+
Sbjct: 156 VVWIVSLVAVIPMTFLITATTSTNRSTCLDLTSSDDLTTIKWYNLILTTTTFCLPLVIVT 215
Query: 711 ICYSQICCKLFKTAKQNPLTEKSGVNKKALNTIIFINVGFV 833
+CY+ I T Q P T K TI+ + V ++
Sbjct: 216 LCYTMI----IYTLTQGPQTHSCLKQKARRLTILLLLVFYI 252
>ref|NP_001075939.1| uracil nucleotide/cysteinyl leukotriene receptor [Bos taurus].
Length = 339
Score = 112 bits (281), Expect = 4e-25
Identities = 57/200 (28%), Positives = 102/200 (51%)
Frame = +3
Query: 243 QNRKKINSTTLYSTNLVISDILFTTALPTRIAYYALGFDWRIGEALCRITALVFYINTYA 422
++ K ++ +L ++D+ LPTR+ Y+ G W GE CR+T +FY+N YA
Sbjct: 58 RDHKSGTPANVFLMHLAVADLSCVLVLPTRLVYHFSGSHWPFGEIPCRLTGFLFYLNMYA 117
Query: 423 GVNFMTCLSIDRFFAVVHPLRYNKIKRIEHAKCICICVWILVFAQTLPLLIKPMSKQEAK 602
+ F+TC+S DRF A+VHP++ K++R HA C +W++V PLL+ P + +
Sbjct: 118 SIYFLTCISADRFLAIVHPVKSLKLRRPLHAHLACAFLWVVVAVAMAPLLVSPQTVRTNN 177
Query: 603 RTTCMEYPNFEETQSLPWILLGACFIGYVLPLLIILICYSQICCKLFKTAKQNPLTEKSG 782
C++ + +Q L + + + P + + CY I ++ +Q P E+
Sbjct: 178 TVVCLQLYREKASQH----ALASLAVAFTFPFVTTVTCYLLI----IRSLRQGPRVERR- 228
Query: 783 VNKKALNTIIFINVGFVVGF 842
+ KA+ I + F++ F
Sbjct: 229 LKNKAVRMIAAVLAIFLICF 248
>ref|NP_001098912.1| G-protein coupled receptor 183 [Bos taurus].
Length = 236
Score = 111 bits (277), Expect = 1e-24
Identities = 52/139 (37%), Positives = 80/139 (57%), Gaps = 2/139 (1%)
Frame = +3
Query: 147 HHD--TARILMPLHYSIVFXXXXXXXXXXXXXXXQNRKKINSTTLYSTNLVISDILFTTA 320
HH A +++ L Y+ + Q KKINST ++ +L +SD+LF
Sbjct: 21 HHPPRVASVMLSLFYTALLIFAVLGNILALRLAYQKDKKINSTGVFLVHLSVSDLLFALT 80
Query: 321 LPTRIAYYALGFDWRIGEALCRITALVFYINTYAGVNFMTCLSIDRFFAVVHPLRYNKIK 500
LP +I Y+ L F+W GE LCR+TA +F++NTY+G+ MTC+S+DR+ AVV + +++
Sbjct: 81 LPGKITYFLLDFNWPFGEGLCRLTAFIFFVNTYSGIYLMTCVSVDRYLAVVRAQQGPRLR 140
Query: 501 RIEHAKCICICVWILVFAQ 557
A+ IC VW+L Q
Sbjct: 141 EPGRAQLICAAVWVLATLQ 159
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 37,541,187
Number of extensions: 1013927
Number of successful extensions: 4535
Number of sequences better than 1.0e-05: 205
Number of HSP's gapped: 4313
Number of HSP's successfully gapped: 205
Length of query: 327
Length of database: 17,681,374
Length adjustment: 103
Effective length of query: 224
Effective length of database: 14,273,310
Effective search space: 3197221440
Effective search space used: 3197221440
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-003231
(981 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_542563.2| PREDICTED: similar to Cysteinyl leukotriene rec... 124 1e-28
Alignment gi|XP_549098.2| PREDICTED: similar to G protein-coupled recepto... 116 4e-26
Alignment gi|XP_850636.1| PREDICTED: similar to pyrimidinergic receptor P... 110 3e-24
Alignment gi|XP_546059.2| PREDICTED: similar to Proteinase activated rece... 109 3e-24
Alignment gi|XP_849866.1| PREDICTED: similar to Proteinase activated rece... 109 3e-24
Alignment gi|XP_542646.1| PREDICTED: similar to Probable G-protein couple... 109 5e-24
Alignment gi|XP_542321.2| PREDICTED: similar to P2Y purinoceptor 2 (P2Y2)... 103 2e-22
Alignment gi|XP_542320.1| PREDICTED: similar to P2Y purinoceptor 6 (P2Y6)... 101 1e-21
Alignment gi|XP_547943.1| PREDICTED: similar to G protein-coupled recepto... 99 6e-21
Alignment gi|XP_541555.1| PREDICTED: similar to Probable G-protein couple... 99 6e-21
>ref|XP_542563.2| PREDICTED: similar to Cysteinyl leukotriene receptor 2 (CysLTR2)
(HG57) (HPN321) (hGPCR21) [Canis familiaris].
Length = 357
Score = 124 bits (311), Expect = 1e-28
Identities = 75/223 (33%), Positives = 115/223 (51%)
Frame = +3
Query: 174 PLHYSIVFXXXXXXXXXXXXXXXQNRKKINSTTLYSTNLVISDILFTTALPTRIAYYALG 353
P+ Y ++F Q+ KK S ++ NL ISD LFT+ LP R YY
Sbjct: 55 PIVYLVIFVWGTLGNGFSIYVFLQSYKKSTSVNVFMLNLAISDFLFTSTLPFRADYYIRS 114
Query: 354 FDWRIGEALCRITALVFYINTYAGVNFMTCLSIDRFFAVVHPLRYNKIKRIEHAKCICIC 533
+W G+ CRI + Y+N Y+ + F+T LSI RF A VHP R + I+ A +C
Sbjct: 115 SNWIFGDLACRIMSYSMYVNMYSSIYFLTVLSIVRFLATVHPFRLLHVTSIKSAWILCGI 174
Query: 534 VWILVFAQTLPLLIKPMSKQEAKRTTCMEYPNFEETQSLPWILLGACFIGYVLPLLIILI 713
+WIL+ A ++ +L+K S+Q+ C+E N + L + A +G++LP ++ I
Sbjct: 175 IWILIMASSV-MLLKNGSEQKGSAVLCLEL-NINKIVKLKTMNYIALVMGFLLPFCMLSI 232
Query: 714 CYSQICCKLFKTAKQNPLTEKSGVNKKALNTIIFINVGFVVGF 842
CY I L K + P + S +KKAL T+I + F++ F
Sbjct: 233 CYLLIIRALLKV--EVPESGLSVSHKKALITVIIALIIFLLCF 273
>ref|XP_549098.2| PREDICTED: similar to G protein-coupled receptor 23 [Canis
familiaris].
Length = 370
Score = 116 bits (290), Expect = 4e-26
Identities = 78/274 (28%), Positives = 126/274 (45%), Gaps = 9/274 (3%)
Frame = +3
Query: 183 YSIVFXXXXXXXXXXXXXXXQNRKKINSTTLYSTNLVISDILFTTALPTRIAYYALGFDW 362
YS+VF KK + T ++ TNL +SD+LF LP +I +Y W
Sbjct: 46 YSVVFILGLITNSASLFVFCFRMKKRSETAIFITNLALSDLLFVCTLPFKI-FYNFNRHW 104
Query: 363 RIGEALCRITALVFYINTYAGVNFMTCLSIDRFFAVVHPLRYNKIKRIEHAKCICICVWI 542
G+ LC+I+ F N Y + F+TC+S+DRF A+V+P R I+ ++ +C VWI
Sbjct: 105 PFGDTLCKISGTAFLTNIYGSMLFLTCISVDRFLAIVYPFRSRTIRTRRNSAIVCAGVWI 164
Query: 543 LVFAQTLPLLIKPMSKQEAKRTTCME-YPNFEETQSLPWILLGACFIGYVLPLLIILICY 719
LV + + + + TTC E + L I + +G+++PL++ + C
Sbjct: 165 LVLSGGISASLFSTTNVNNATTTCFEGFSKRVWKTYLSKITIFIEVVGFIIPLILNVSCS 224
Query: 720 SQICCKLFKTAKQNPLTEKSGVNKKALNTIIFINVG-FVVGFXXXXXXXXXXXXRSFIFL 896
S + +T ++ + G NKK + +I +++ FVV F S +FL
Sbjct: 225 SVV----LRTLRKPATLSQIGTNKKKVLKMITVHMAVFVVCF---------VPYNSVLFL 271
Query: 897 -------TFGNVVKKNSFQIALPITGCLKKFNCC 977
N + + +I PIT CL NCC
Sbjct: 272 YALVRSQAITNCLLERFAKIMYPITLCLATLNCC 305
>ref|XP_850636.1| PREDICTED: similar to pyrimidinergic receptor P2Y, G-protein
coupled, 4-like [Canis familiaris].
Length = 330
Score = 110 bits (274), Expect = 3e-24
Identities = 68/226 (30%), Positives = 107/226 (47%), Gaps = 4/226 (1%)
Frame = +3
Query: 153 DTARILMPLHYSIVFXXXXXXXXXXXXXXXQNRKKINSTTLYSTNLVISDILFTTALPTR 332
D +I + L YSI+ + K+ + T+Y NL+++D+L+ LP
Sbjct: 20 DYKQIYLSLTYSIILMLGMPLNGMVLWLSWRQTKRWSCATIYLVNLMVADLLYVLTLPFL 79
Query: 333 IAYYALGFDWRIGEALCRITALVFYINTYAGVNFMTCLSIDRFFAVVHPLRYNKIKRIEH 512
I Y+LG W GE LCR+ +FY N Y + +TC+S+ RF V HPLR + H
Sbjct: 80 ITTYSLGDRWPFGELLCRLVRFLFYTNLYGSILLLTCISVHRFLGVCHPLRSLPYRTRRH 139
Query: 513 AKCICICVWILVFAQTLPLLIKPMSKQEAKRTTCMEY---PNFEETQSLPWILLGACFIG 683
A W LV Q LP L ++ + C + NF++ + +L G
Sbjct: 140 ALLGTATTWALVVLQLLPTLFFSHTEYIDGQMICYDMTGPENFDQFFAYGVVL---TLSG 196
Query: 684 YVLPLLIILICYSQICCKLFKTAKQNPLTEKSGVNK-KALNTIIFI 818
+V P L+IL+CYS + L K + L + V + K++ TI+ +
Sbjct: 197 FVFPSLVILVCYSLMVRSLIKPGE--ALMKTGNVTRAKSIRTILLV 240
>ref|XP_546059.2| PREDICTED: similar to Proteinase activated receptor 1 precursor
(PAR-1) (Thrombin receptor) (Coagulation factor II
receptor) [Canis familiaris].
Length = 464
Score = 109 bits (273), Expect = 3e-24
Identities = 67/241 (27%), Positives = 112/241 (46%), Gaps = 5/241 (2%)
Frame = +3
Query: 273 LYSTNLVISDILFTTALPTRIAYYALGFDWRIGEALCRITALVFYINTYAGVNFMTCLSI 452
+Y +L ++D+LF + LP +I+YY G DW+ G LCR FY N YA + MT +S+
Sbjct: 178 VYMLHLAVADVLFASVLPFKISYYFSGSDWKFGSELCRFVTAAFYCNMYASIMLMTVISV 237
Query: 453 DRFFAVVHPLRYNKIKRIEHAKCICICVWILVFAQTLPLLIKPMSKQ--EAKRTTCMEYP 626
DRF AVV+P++ + + A C+ +W + A +PLL+K + Q TTC +
Sbjct: 238 DRFLAVVYPIQSLSWRTLGRASFTCLAIWAMAIAGVVPLLLKEQTTQVPGLNITTCHDVL 297
Query: 627 N---FEETQSLPWILLGACFIGYVLPLLIILICYSQICCKLFKTAKQNPLTEKSGVNKKA 797
N E + + A F + +PL+I ICY I L+ + N+
Sbjct: 298 NETLLEGYYAYYFSSFSAVF--FFVPLIISTICYVSII---------RCLSSSTVANRSK 346
Query: 798 LNTIIFINVGFVVGFXXXXXXXXXXXXRSFIFLTFGNVVKKNSFQIALPITGCLKKFNCC 977
+ +F+++ F + FL+ +V + F L + C+ +CC
Sbjct: 347 KSRALFLSLAVFCIFIICFGPTNVLLILHYSFLSQDSVTEAAYFAYLLCV--CVSSISCC 404
Query: 978 M 980
+
Sbjct: 405 L 405
>ref|XP_849866.1| PREDICTED: similar to Proteinase activated receptor 3 precursor
(PAR-3) (Thrombin receptor-like 2) (Coagulation factor
II receptor-like 2) [Canis familiaris].
Length = 379
Score = 109 bits (273), Expect = 3e-24
Identities = 69/224 (30%), Positives = 107/224 (47%), Gaps = 14/224 (6%)
Frame = +3
Query: 99 TTPSQAPQESDCDLYAHHDT--------ARILMPLHYSIVFXXXXXXXXXXXXXXXQNRK 254
T + P+ES +L ++ T + L+P Y +VF +
Sbjct: 66 TIKFKCPEESVSNLQVNNATMGYLRSSLSTKLIPAIYILVFVVGVPANVVTLWRLFFRTR 125
Query: 255 KINSTTLYSTNLVISDILFTTALPTRIAYYALGFDWRIGEALCRITALVFYINTYAGVNF 434
I T Y TNL I+D LF LP +IAY+ G +W GE +CR T ++FY N Y +
Sbjct: 126 SICMTIFY-TNLAIADFLFCVTLPFKIAYHLNGNNWVFGEVMCRATTVIFYGNMYCSILL 184
Query: 435 MTCLSIDRFFAVVHPLRYNKIKRIEHAKCICICVWILVFAQTLPLLIKP----MSKQEAK 602
+ C+SI R+ A+VHP Y + + +A C VW VF LP I + +Q+ K
Sbjct: 185 LACISISRYLAIVHPFTYRVLPKRYYAFLTCGFVWATVFLYMLPFFILKQEYYLVQQDIK 244
Query: 603 RTTCMEYPNFEETQS--LPWILLGACFIGYVLPLLIILICYSQI 728
TC + N E+ S + + F G+++P ++I+ CY+ I
Sbjct: 245 --TCHDVHNTCESSSPFQLYYFISLAFFGFLIPFVVIIYCYTAI 286
>ref|XP_542646.1| PREDICTED: similar to Probable G-protein coupled receptor 80
(P2Y-like nucleotide receptor) (P2Y-like GPCR) [Canis
familiaris].
Length = 337
Score = 109 bits (272), Expect = 5e-24
Identities = 59/224 (26%), Positives = 102/224 (45%)
Frame = +3
Query: 162 RILMPLHYSIVFXXXXXXXXXXXXXXXQNRKKINSTTLYSTNLVISDILFTTALPTRIAY 341
R +P+ YSI+F + +T+ NL +D+L+ T+ P I Y
Sbjct: 33 RHYLPVIYSIIFLVGFPGNAVAISTYIFKMRPWKGSTVIMLNLACTDLLYLTSFPFLIHY 92
Query: 342 YALGFDWRIGEALCRITALVFYINTYAGVNFMTCLSIDRFFAVVHPLRYNKIKRIEHAKC 521
YA G +W G+ +C+ F+ N Y+ + F+TC SI R+F ++HP+ I + A
Sbjct: 93 YASGENWVFGDFMCKFIRFGFHFNLYSSILFLTCFSIFRYFVIIHPMSCFSIHKTRWAVV 152
Query: 522 ICICVWILVFAQTLPLLIKPMSKQEAKRTTCMEYPNFEETQSLPWILLGACFIGYVLPLL 701
C VWI+ +P+ S R+ C++ + ++ ++ W L + LPL+
Sbjct: 153 ACAVVWIISLVAVIPMTFLITSTTGTNRSACLDLTSSDDLTTIKWYNLILTATTFCLPLV 212
Query: 702 IILICYSQICCKLFKTAKQNPLTEKSGVNKKALNTIIFINVGFV 833
I+ +CY+ I T Q P K TI+ + V ++
Sbjct: 213 IVTLCYTMI----IYTLTQGPHNHSCLKQKARRLTILLLLVFYI 252
>ref|XP_542321.2| PREDICTED: similar to P2Y purinoceptor 2 (P2Y2) (P2U purinoceptor
1) (P2U1) (ATP receptor) (Purinergic receptor) [Canis
familiaris].
Length = 377
Score = 103 bits (257), Expect = 2e-22
Identities = 58/205 (28%), Positives = 96/205 (46%), Gaps = 3/205 (1%)
Frame = +3
Query: 147 HHDTARILMPLHYSIVFXXXXXXXXXXXXXXXQNRKKINSTTLYSTNLVISDILFTTALP 326
+ D +L+P+ Y +V K N++T Y +L +SD L+ +LP
Sbjct: 28 NEDFKYVLLPVSYGVVCVLGLCLNAVALYIFLCRLKTWNASTTYMFHLAVSDALYAASLP 87
Query: 327 TRIAYYALGFDWRIGEALCRITALVFYINTYAGVNFMTCLSIDRFFAVVHPLRYNKIKRI 506
+ YY+ G W LC++ +FY N Y + F+TC+S+ R V+ PLR + R
Sbjct: 88 LLVYYYSRGDHWPFSMVLCKLVRFLFYTNLYCSILFLTCISVHRCLGVLRPLRSLRWGRA 147
Query: 507 EHAKCICICVWILVFAQTLPLLIKPMSKQEAKRTTCMEYPN---FEETQSLPWILLGACF 677
+A+ + VW+LV A P+L + R TC + F + + ++LG F
Sbjct: 148 RYARRVAAAVWVLVLACQSPVLYFVTTSVRGSRITCHDTSAPELFGQFVAYSSVMLGLLF 207
Query: 678 IGYVLPLLIILICYSQICCKLFKTA 752
P +IL+CY+ + +L K A
Sbjct: 208 ---AAPFAVILVCYALMARRLLKPA 229
>ref|XP_542320.1| PREDICTED: similar to P2Y purinoceptor 6 (P2Y6) [Canis familiaris].
Length = 325
Score = 101 bits (251), Expect = 1e-21
Identities = 60/230 (26%), Positives = 109/230 (47%), Gaps = 3/230 (1%)
Frame = +3
Query: 162 RILMPLHYSIVFXXXXXXXXXXXXXXXQNRKKINSTTLYSTNLVISDILFTTALPTRIAY 341
R+L+P YS+V +R+ + T +Y+ NL ++D+L+ +LP I
Sbjct: 26 RLLLPPVYSVVLAAGLPLNACVIAQICTSRRALTRTAVYTLNLALADLLYACSLPLLIYN 85
Query: 342 YALGFDWRIGEALCRITALVFYINTYAGVNFMTCLSIDRFFAVVHPLR-YNKIKRIEHAK 518
YA G W G+ CR+ +FY N + + F+TC+S R+ + +PL ++K A
Sbjct: 86 YAQGDHWPFGDLACRLVRFLFYANLHGSILFLTCISFQRYLGICYPLAPWHKRGGRRAAW 145
Query: 519 CICICVWILVFAQTLPLLIKPMSKQEAKRTTCMEY-PNFEETQSLPWILLGACFIGYVLP 695
+C VW+ V Q LP + + + RT C + T+ +P+ + IG++LP
Sbjct: 146 LVCGAVWLAVTTQCLPTALFASTGIQRNRTVCYDLSAPALATRYMPY-GMALTVIGFLLP 204
Query: 696 LLIILICYSQICCKLFK-TAKQNPLTEKSGVNKKALNTIIFINVGFVVGF 842
+ +L CY ++ +L + P+ ++ KA + + F + F
Sbjct: 205 FIALLACYCRLAHRLCRQDGPAGPVAQER--RGKAARMAMVVAAAFAISF 252
>ref|XP_547943.1| PREDICTED: similar to G protein-coupled receptor 65 [Canis
familiaris].
Length = 341
Score = 99.0 bits (245), Expect = 6e-21
Identities = 62/203 (30%), Positives = 104/203 (51%), Gaps = 6/203 (2%)
Frame = +3
Query: 252 KKINSTTLYSTNLVISDILFTTALPTRIAYYALGFDWRIGEALCRITALVFYINTYAGVN 431
KK N +Y +L +SD+L+T LP I Y +W ALC+ +A Y+N Y+
Sbjct: 44 KKENELGIYLFSLSLSDLLYTLTLPLWIDYTLNNDNWTFSPALCKSSAFFMYMNFYSSTA 103
Query: 432 FMTCLSIDRFFAVVHPLRYNKIKRIEHAKCICICVWIL------VFAQTLPLLIKPMSKQ 593
F+TC++IDR+ AVVHPL+++ ++ A + +W+L V I+ +
Sbjct: 104 FLTCIAIDRYLAVVHPLKFSFVRTRRFAFVASLSIWVLETMFNGVILWEDETAIEYCDAK 163
Query: 594 EAKRTTCMEYPNFEETQSLPWILLGACFIGYVLPLLIILICYSQICCKLFKTAKQNPLTE 773
++ T C + E+ Q + L C GY +PL+II+IC K+++ + N TE
Sbjct: 164 KSNFTLCYDKYPLEKWQ-ISLNLFRTC-TGYAIPLVIIMICNQ----KVYQAVQHNQATE 217
Query: 774 KSGVNKKALNTIIFINVGFVVGF 842
G K+ + ++ I + FV+ F
Sbjct: 218 -DGEKKRIIKLLMSITLTFVLCF 239
>ref|XP_541555.1| PREDICTED: similar to Probable G-protein coupled receptor GPR4
(GPR19) [Canis familiaris].
Length = 363
Score = 99.0 bits (245), Expect = 6e-21
Identities = 54/191 (28%), Positives = 96/191 (50%), Gaps = 1/191 (0%)
Frame = +3
Query: 261 NSTTLYSTNLVISDILFTTALPTRIAYYALGFDWRIGEALCRITALVFYINTYAGVNFMT 440
N +Y NL I+D+L+ LP + Y+ +W G C++ +FY N Y + F+
Sbjct: 50 NELGVYLMNLSIADLLYICTLPLWVDYFLHHDNWIHGPGSCKLFGFIFYTNIYISIAFLC 109
Query: 441 CLSIDRFFAVVHPLRYNKIKRIEHAKCICICVWIL-VFAQTLPLLIKPMSKQEAKRTTCM 617
C+S+DR+ AV HPLR+ +++R++ A + VW + A + PL + + T C
Sbjct: 110 CISVDRYLAVAHPLRFARLRRVKTAVAVSSVVWATELGANSAPLFHDELFRDRYNHTFCF 169
Query: 618 EYPNFEETQSLPWILLGACFIGYVLPLLIILICYSQICCKLFKTAKQNPLTEKSGVNKKA 797
E F + W+ L F+G++ P ++L+ Y I + + + EK+ + + A
Sbjct: 170 E--KFPMEGWVAWMNLYRVFVGFLFPWALMLLSYRGI-LRAVRGSVSTERQEKAKIKRLA 226
Query: 798 LNTIIFINVGF 830
L+ I + V F
Sbjct: 227 LSLIAIVLVCF 237
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 39,074,599
Number of extensions: 1032881
Number of successful extensions: 3002
Number of sequences better than 1.0e-05: 140
Number of HSP's gapped: 2893
Number of HSP's successfully gapped: 141
Length of query: 327
Length of database: 18,874,504
Length adjustment: 103
Effective length of query: 224
Effective length of database: 15,440,896
Effective search space: 3458760704
Effective search space used: 3458760704
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-003231
(981 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_004942.1| G-protein coupled receptor 183 [Homo sapiens]. 454 e-128
Alignment gi|NP_006630.1| cysteinyl leukotriene receptor 1 [Homo sapiens]. 121 1e-27
Alignment gi|NP_065110.1| cysteinyl leukotriene receptor 2 [Homo sapiens]. 120 1e-27
Alignment gi|NP_001155970.1| lysophosphatidic acid receptor 6 [Homo sapie... 118 7e-27
Alignment gi|NP_001155969.1| lysophosphatidic acid receptor 6 [Homo sapie... 118 7e-27
Alignment gi|NP_005758.2| lysophosphatidic acid receptor 6 [Homo sapiens]. 118 7e-27
Alignment gi|NP_004092.1| proteinase-activated receptor 3 precursor [Homo... 114 1e-25
Alignment gi|NP_005287.1| lysophosphatidic acid receptor 4 [Homo sapiens]. 113 2e-25
Alignment gi|NP_543008.3| 2-oxoglutarate receptor 1 [Homo sapiens]. 111 1e-24
Alignment gi|NP_002556.1| P2Y purinoceptor 4 [Homo sapiens]. 110 3e-24
>ref|NP_004942.1| G-protein coupled receptor 183 [Homo sapiens].
Length = 361
Score = 454 bits (1169), Expect = e-128
Identities = 228/302 (75%), Positives = 246/302 (81%), Gaps = 1/302 (0%)
Frame = +3
Query: 78 DIKM-DNFTTPSQAPQESDCDLYAHHDTARILMPLHYSIVFXXXXXXXXXXXXXXXQNRK 254
DI+M +NFT PS PQ +DCDLYAHH TARI+MPLHYS+VF QNRK
Sbjct: 2 DIQMANNFTPPSATPQGNDCDLYAHHSTARIVMPLHYSLVFIIGLVGNLLALVVIVQNRK 61
Query: 255 KINSTTLYSTNLVISDILFTTALPTRIAYYALGFDWRIGEALCRITALVFYINTYAGVNF 434
KINSTTLYSTNLVISDILFTTALPTRIAYYA+GFDWRIG+ALCRITALVFYINTYAGVNF
Sbjct: 62 KINSTTLYSTNLVISDILFTTALPTRIAYYAMGFDWRIGDALCRITALVFYINTYAGVNF 121
Query: 435 MTCLSIDRFFAVVHPLRYNKIKRIEHAKCICICVWILVFAQTLPLLIKPMSKQEAKRTTC 614
MTCLSIDRF AVVHPLRYNKIKRIEHAK +CI VWILVFAQTLPLLI PMSKQEA+R TC
Sbjct: 122 MTCLSIDRFIAVVHPLRYNKIKRIEHAKGVCIFVWILVFAQTLPLLINPMSKQEAERITC 181
Query: 615 MEYPNFEETQSLPWILLGACFIGYVLPLLIILICYSQICCKLFKTAKQNPLTEKSGVNKK 794
MEYPNFEET+SLPWILLGACFIGYVLPL+IILICYSQICCKLF+TAKQNPLTEKSGVNKK
Sbjct: 182 MEYPNFEETKSLPWILLGACFIGYVLPLIIILICYSQICCKLFRTAKQNPLTEKSGVNKK 241
Query: 795 ALNTIIFINVGFVVGFXXXXXXXXXXXXRSFIFLTFGNVVKKNSFQIALPITGCLKKFNC 974
ALNTII I V FV+ F + F F +++SFQI+L T CL FNC
Sbjct: 242 ALNTIILIIVVFVLCFTPYHVAIIQHMIKKLRFSNFLECSQRHSFQISLHFTVCLMNFNC 301
Query: 975 CM 980
CM
Sbjct: 302 CM 303
>ref|NP_006630.1| cysteinyl leukotriene receptor 1 [Homo sapiens].
Length = 337
Score = 121 bits (303), Expect = 1e-27
Identities = 60/197 (30%), Positives = 105/197 (53%), Gaps = 1/197 (0%)
Frame = +3
Query: 255 KINSTTLYSTNLVISDILFTTALPTRIAYYALGFDWRIGEALCRITALVFYINTYAGVNF 434
K ++ +Y NL ++D+L LP R+ YY W G+ LCR++ Y+N Y + F
Sbjct: 54 KKSAFQVYMINLAVADLLCVCTLPLRVVYYVHKGIWLFGDFLCRLSTYALYVNLYCSIFF 113
Query: 435 MTCLSIDRFFAVVHPLRYNKIKRIEHAKCICICVWILVFAQTLPLLIKPMSKQEAKRTTC 614
MT +S R A+V P++ + + A+ +C+ +WI V + P L+ K E T C
Sbjct: 114 MTAMSFFRCIAIVFPVQNINLVTQKKARFVCVGIWIFVILTSSPFLMAKPQKDEKNNTKC 173
Query: 615 MEYPNFEETQSLPWIL-LGACFIGYVLPLLIILICYSQICCKLFKTAKQNPLTEKSGVNK 791
E P +T++ +L + F+G+++P +II++CY+ I L K + + L+ +K
Sbjct: 174 FEPPQDNQTKNHVLVLHYVSLFVGFIIPFVIIIVCYTMIILTLLKKSMKKNLSS----HK 229
Query: 792 KALNTIIFINVGFVVGF 842
KA+ I+ + F+V F
Sbjct: 230 KAIGMIMVVTAAFLVSF 246
>ref|NP_065110.1| cysteinyl leukotriene receptor 2 [Homo sapiens].
Length = 346
Score = 120 bits (302), Expect = 1e-27
Identities = 85/272 (31%), Positives = 126/272 (46%)
Frame = +3
Query: 162 RILMPLHYSIVFXXXXXXXXXXXXXXXQNRKKINSTTLYSTNLVISDILFTTALPTRIAY 341
R P+ Y I+F Q KK S ++ NL ISD+LF + LP R Y
Sbjct: 38 REFFPIVYLIIFFWGVLGNGLSIYVFLQPYKKSTSVNVFMLNLAISDLLFISTLPFRADY 97
Query: 342 YALGFDWRIGEALCRITALVFYINTYAGVNFMTCLSIDRFFAVVHPLRYNKIKRIEHAKC 521
Y G +W G+ CRI + Y+N Y+ + F+T LS+ RF A+VHP R + I A
Sbjct: 98 YLRGSNWIFGDLACRIMSYSLYVNMYSSIYFLTVLSVVRFLAMVHPFRLLHVTSIRSAWI 157
Query: 522 ICICVWILVFAQTLPLLIKPMSKQEAKRTTCMEYPNFEETQSLPWILLGACFIGYVLPLL 701
+C +WIL+ A ++ +L+ S+Q T+C+E N + L + A +G +LP
Sbjct: 158 LCGIIWILIMASSI-MLLDSGSEQNGSVTSCLEL-NLYKIAKLQTMNYIALVVGCLLPFF 215
Query: 702 IILICYSQICCKLFKTAKQNPLTEKSGVNKKALNTIIFINVGFVVGFXXXXXXXXXXXXR 881
+ ICY I L K + P + ++KAL TII + F + F R
Sbjct: 216 TLSICYLLIIRVLLKV--EVPESGLRVSHRKALTTIIITLIIFFLCF------LPYHTLR 267
Query: 882 SFIFLTFGNVVKKNSFQIALPITGCLKKFNCC 977
+ T+ + K+ AL IT L N C
Sbjct: 268 TVHLTTWKVGLCKDRLHKALVITLALAAANAC 299
>ref|NP_001155970.1| lysophosphatidic acid receptor 6 [Homo sapiens].
Length = 344
Score = 118 bits (296), Expect = 7e-27
Identities = 69/242 (28%), Positives = 117/242 (48%), Gaps = 3/242 (1%)
Frame = +3
Query: 261 NSTTLYSTNLVISDILFTTALPTRIAYYALGFDWRIGEALCRITALVFYINTYAGVNFMT 440
N TT Y NL +SD+LF LP RI Y+ +W G+ LC+I+ ++FY N Y + F+T
Sbjct: 50 NETTTYMINLAMSDLLFVFTLPFRIFYFTTR-NWPFGDLLCKISVMLFYTNMYGSILFLT 108
Query: 441 CLSIDRFFAVVHPLRYNKIKRIEHAKCICICVWILVFAQTLPLLIKPMSKQEAKRTTCME 620
C+S+DRF A+V+P + ++ +AK +C VW+ V + P + + + +
Sbjct: 109 CISVDRFLAIVYPFKSKTLRTKRNAKIVCTGVWLTVIGGSAPAVFVQSTHSQGNNASEAC 168
Query: 621 YPNFEET---QSLPWILLGACFIGYVLPLLIILICYSQICCKLFKTAKQNPLTEKSGVNK 791
+ NF E L I++ +G+ +PL++ + C S + KT + +S +NK
Sbjct: 169 FENFPEATWKTYLSRIVIFIEIVGFFIPLILNVTCSSMV----LKTLTKPVTLSRSKINK 224
Query: 792 KALNTIIFINVGFVVGFXXXXXXXXXXXXRSFIFLTFGNVVKKNSFQIALPITGCLKKFN 971
+ +IF+++ + F TF N + + PIT C+ N
Sbjct: 225 TKVLKMIFVHL-IIFCFCFVPYNINLILYSLVRTQTFVNCSVVAAVRTMYPITLCIAVSN 283
Query: 972 CC 977
CC
Sbjct: 284 CC 285
>ref|NP_001155969.1| lysophosphatidic acid receptor 6 [Homo sapiens].
Length = 344
Score = 118 bits (296), Expect = 7e-27
Identities = 69/242 (28%), Positives = 117/242 (48%), Gaps = 3/242 (1%)
Frame = +3
Query: 261 NSTTLYSTNLVISDILFTTALPTRIAYYALGFDWRIGEALCRITALVFYINTYAGVNFMT 440
N TT Y NL +SD+LF LP RI Y+ +W G+ LC+I+ ++FY N Y + F+T
Sbjct: 50 NETTTYMINLAMSDLLFVFTLPFRIFYFTTR-NWPFGDLLCKISVMLFYTNMYGSILFLT 108
Query: 441 CLSIDRFFAVVHPLRYNKIKRIEHAKCICICVWILVFAQTLPLLIKPMSKQEAKRTTCME 620
C+S+DRF A+V+P + ++ +AK +C VW+ V + P + + + +
Sbjct: 109 CISVDRFLAIVYPFKSKTLRTKRNAKIVCTGVWLTVIGGSAPAVFVQSTHSQGNNASEAC 168
Query: 621 YPNFEET---QSLPWILLGACFIGYVLPLLIILICYSQICCKLFKTAKQNPLTEKSGVNK 791
+ NF E L I++ +G+ +PL++ + C S + KT + +S +NK
Sbjct: 169 FENFPEATWKTYLSRIVIFIEIVGFFIPLILNVTCSSMV----LKTLTKPVTLSRSKINK 224
Query: 792 KALNTIIFINVGFVVGFXXXXXXXXXXXXRSFIFLTFGNVVKKNSFQIALPITGCLKKFN 971
+ +IF+++ + F TF N + + PIT C+ N
Sbjct: 225 TKVLKMIFVHL-IIFCFCFVPYNINLILYSLVRTQTFVNCSVVAAVRTMYPITLCIAVSN 283
Query: 972 CC 977
CC
Sbjct: 284 CC 285
>ref|NP_005758.2| lysophosphatidic acid receptor 6 [Homo sapiens].
Length = 344
Score = 118 bits (296), Expect = 7e-27
Identities = 69/242 (28%), Positives = 117/242 (48%), Gaps = 3/242 (1%)
Frame = +3
Query: 261 NSTTLYSTNLVISDILFTTALPTRIAYYALGFDWRIGEALCRITALVFYINTYAGVNFMT 440
N TT Y NL +SD+LF LP RI Y+ +W G+ LC+I+ ++FY N Y + F+T
Sbjct: 50 NETTTYMINLAMSDLLFVFTLPFRIFYFTTR-NWPFGDLLCKISVMLFYTNMYGSILFLT 108
Query: 441 CLSIDRFFAVVHPLRYNKIKRIEHAKCICICVWILVFAQTLPLLIKPMSKQEAKRTTCME 620
C+S+DRF A+V+P + ++ +AK +C VW+ V + P + + + +
Sbjct: 109 CISVDRFLAIVYPFKSKTLRTKRNAKIVCTGVWLTVIGGSAPAVFVQSTHSQGNNASEAC 168
Query: 621 YPNFEET---QSLPWILLGACFIGYVLPLLIILICYSQICCKLFKTAKQNPLTEKSGVNK 791
+ NF E L I++ +G+ +PL++ + C S + KT + +S +NK
Sbjct: 169 FENFPEATWKTYLSRIVIFIEIVGFFIPLILNVTCSSMV----LKTLTKPVTLSRSKINK 224
Query: 792 KALNTIIFINVGFVVGFXXXXXXXXXXXXRSFIFLTFGNVVKKNSFQIALPITGCLKKFN 971
+ +IF+++ + F TF N + + PIT C+ N
Sbjct: 225 TKVLKMIFVHL-IIFCFCFVPYNINLILYSLVRTQTFVNCSVVAAVRTMYPITLCIAVSN 283
Query: 972 CC 977
CC
Sbjct: 284 CC 285
>ref|NP_004092.1| proteinase-activated receptor 3 precursor [Homo sapiens].
Length = 374
Score = 114 bits (285), Expect = 1e-25
Identities = 69/222 (31%), Positives = 106/222 (47%), Gaps = 12/222 (5%)
Frame = +3
Query: 99 TTPSQAPQESDCDLYAHHDT--------ARILMPLHYSIVFXXXXXXXXXXXXXXXQNRK 254
T + P+ES L+ + T + L+P Y +VF +
Sbjct: 65 TVKIKCPEESASHLHVKNATMGYLTSSLSTKLIPAIYLLVFVVGVPANAVTLWMLFFRTR 124
Query: 255 KINSTTLYSTNLVISDILFTTALPTRIAYYALGFDWRIGEALCRITALVFYINTYAGVNF 434
I TT++ TNL I+D LF LP +IAY+ G +W GE LCR T ++FY N Y +
Sbjct: 125 SI-CTTVFYTNLAIADFLFCVTLPFKIAYHLNGNNWVFGEVLCRATTVIFYGNMYCSILL 183
Query: 435 MTCLSIDRFFAVVHPLRYNKIKRIEHAKCICICVWILVFAQTLPLLIKPMSKQ--EAKRT 608
+ C+SI+R+ A+VHP Y + + +A C VW VF LP I + T
Sbjct: 184 LACISINRYLAIVHPFTYRGLPKHTYALVTCGLVWATVFLYMLPFFILKQEYYLVQPDIT 243
Query: 609 TCMEYPNFEETQS--LPWILLGACFIGYVLPLLIILICYSQI 728
TC + N E+ S + + F G+++P ++I+ CY+ I
Sbjct: 244 TCHDVHNTCESSSPFQLYYFISLAFFGFLIPFVLIIYCYAAI 285
>ref|NP_005287.1| lysophosphatidic acid receptor 4 [Homo sapiens].
Length = 370
Score = 113 bits (283), Expect = 2e-25
Identities = 77/274 (28%), Positives = 124/274 (45%), Gaps = 9/274 (3%)
Frame = +3
Query: 183 YSIVFXXXXXXXXXXXXXXXQNRKKINSTTLYSTNLVISDILFTTALPTRIAYYALGFDW 362
YS+VF K + T ++ TNL +SD+LF LP +I +Y W
Sbjct: 46 YSVVFILGLITNSVSLFVFCFRMKMRSETAIFITNLAVSDLLFVCTLPFKI-FYNFNRHW 104
Query: 363 RIGEALCRITALVFYINTYAGVNFMTCLSIDRFFAVVHPLRYNKIKRIEHAKCICICVWI 542
G+ LC+I+ F N Y + F+TC+S+DRF A+V+P R I+ ++ +C VWI
Sbjct: 105 PFGDTLCKISGTAFLTNIYGSMLFLTCISVDRFLAIVYPFRSRTIRTRRNSAIVCAGVWI 164
Query: 543 LVFAQTLPLLIKPMSKQEAKRTTCME-YPNFEETQSLPWILLGACFIGYVLPLLIILICY 719
LV + + + + TTC E + L I + +G+++PL++ + C
Sbjct: 165 LVLSGGISASLFSTTNVNNATTTCFEGFSKRVWKTYLSKITIFIEVVGFIIPLILNVSCS 224
Query: 720 SQICCKLFKTAKQNPLTEKSGVNKKALNTIIFINVG-FVVGFXXXXXXXXXXXXRSFIFL 896
S + +T ++ + G NKK + +I +++ FVV F S +FL
Sbjct: 225 SVV----LRTLRKPATLSQIGTNKKKVLKMITVHMAVFVVCF---------VPYNSVLFL 271
Query: 897 -------TFGNVVKKNSFQIALPITGCLKKFNCC 977
N + +I PIT CL NCC
Sbjct: 272 YALVRSQAITNCFLERFAKIMYPITLCLATLNCC 305
>ref|NP_543008.3| 2-oxoglutarate receptor 1 [Homo sapiens].
Length = 337
Score = 111 bits (277), Expect = 1e-24
Identities = 61/224 (27%), Positives = 104/224 (46%)
Frame = +3
Query: 171 MPLHYSIVFXXXXXXXXXXXXXXXQNRKKINSTTLYSTNLVISDILFTTALPTRIAYYAL 350
+P+ Y I+F + S+T+ NL +D+L+ T+LP I YYA
Sbjct: 36 LPVIYGIIFLVGFPGNAVVISTYIFKMRPWKSSTIIMLNLACTDLLYLTSLPFLIHYYAS 95
Query: 351 GFDWRIGEALCRITALVFYINTYAGVNFMTCLSIDRFFAVVHPLRYNKIKRIEHAKCICI 530
G +W G+ +C+ F+ N Y+ + F+TC SI R+ ++HP+ I + A C
Sbjct: 96 GENWIFGDFMCKFIRFSFHFNLYSSILFLTCFSIFRYCVIIHPMSCFSIHKTRCAVVACA 155
Query: 531 CVWILVFAQTLPLLIKPMSKQEAKRTTCMEYPNFEETQSLPWILLGACFIGYVLPLLIIL 710
VWI+ +P+ S R+ C++ + +E ++ W L + LPL+I+
Sbjct: 156 VVWIISLVAVIPMTFLITSTNRTNRSACLDLTSSDELNTIKWYNLILTATTFCLPLVIVT 215
Query: 711 ICYSQICCKLFKTAKQNPLTEKSGVNKKALNTIIFINVGFVVGF 842
+CY+ I L + L S + +KA I + + F V F
Sbjct: 216 LCYTTIIHTL-----THGLQTDSCLKQKARRLTILLLLAFYVCF 254
>ref|NP_002556.1| P2Y purinoceptor 4 [Homo sapiens].
Length = 365
Score = 110 bits (274), Expect = 3e-24
Identities = 65/247 (26%), Positives = 110/247 (44%)
Frame = +3
Query: 102 TPSQAPQESDCDLYAHHDTARILMPLHYSIVFXXXXXXXXXXXXXXXQNRKKINSTTLYS 281
+P E + D + D IL+P+ Y++VF + ++T Y
Sbjct: 15 SPGPGSSEVELDCWFDEDFKFILLPVSYAVVFVLGLGLNAPTLWLFIFRLRPWDATATYM 74
Query: 282 TNLVISDILFTTALPTRIAYYALGFDWRIGEALCRITALVFYINTYAGVNFMTCLSIDRF 461
+L +SD L+ +LPT I YYA W G +C+ +FY N Y V F+TC+S+ R+
Sbjct: 75 FHLALSDTLYVLSLPTLIYYYAAHNHWPFGTEICKFVRFLFYWNLYCSVLFLTCISVHRY 134
Query: 462 FAVVHPLRYNKIKRIEHAKCICICVWILVFAQTLPLLIKPMSKQEAKRTTCMEYPNFEET 641
+ HPLR + R A +C+ VW++V +P L + + C + EE
Sbjct: 135 LGICHPLRALRWGRPRLAGLLCLAVWLVVAGCLVPNLFFVTTSNKGTTVLCHDTTRPEEF 194
Query: 642 QSLPWILLGACFIGYVLPLLIILICYSQICCKLFKTAKQNPLTEKSGVNKKALNTIIFIN 821
+ + +P L+ L+CY + +L++ P + +S ++L TI +
Sbjct: 195 DHYVHFSSAVMGLLFGVPCLVTLVCYGLMARRLYQPL---PGSAQSSSRLRSLRTIAVVL 251
Query: 822 VGFVVGF 842
F V F
Sbjct: 252 TVFAVCF 258
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 38,514,723
Number of extensions: 1034893
Number of successful extensions: 3134
Number of sequences better than 1.0e-05: 235
Number of HSP's gapped: 2932
Number of HSP's successfully gapped: 235
Length of query: 327
Length of database: 18,297,164
Length adjustment: 103
Effective length of query: 224
Effective length of database: 14,901,872
Effective search space: 3338019328
Effective search space used: 3338019328
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-003231
(981 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_898852.2| G-protein coupled receptor 183 [Mus musculus]. 423 e-118
Alignment gi|NP_780325.1| lysophosphatidic acid receptor 6 [Mus musculus]. 120 2e-27
Alignment gi|NP_034300.3| proteinase-activated receptor 3 precursor [Mus ... 117 1e-26
Alignment gi|NP_067451.2| cysteinyl leukotriene receptor 1 [Mus musculus]. 116 3e-26
Alignment gi|NP_780480.2| lysophosphatidic acid receptor 4 [Mus musculus]. 114 1e-25
Alignment gi|NP_001155884.1| cysteinyl leukotriene receptor 2 [Mus muscul... 113 3e-25
Alignment gi|NP_598481.2| cysteinyl leukotriene receptor 2 [Mus musculus]. 113 3e-25
Alignment gi|NP_001020552.1| uracil nucleotide/cysteinyl leukotriene rece... 111 1e-24
Alignment gi|NP_065646.1| P2Y purinoceptor 4 [Mus musculus]. 110 2e-24
Alignment gi|NP_001001490.1| 2-oxoglutarate receptor 1 [Mus musculus]. 109 3e-24
>ref|NP_898852.2| G-protein coupled receptor 183 [Mus musculus].
Length = 357
Score = 423 bits (1087), Expect = e-118
Identities = 208/297 (70%), Positives = 232/297 (78%)
Frame = +3
Query: 90 DNFTTPSQAPQESDCDLYAHHDTARILMPLHYSIVFXXXXXXXXXXXXXXXQNRKKINST 269
+NFTTP ++CDLYAHH TAR+LMPLHYS+VF QNRKKINST
Sbjct: 3 NNFTTPLATSHGNNCDLYAHHSTARVLMPLHYSLVFIIGLVGNLLALVVIVQNRKKINST 62
Query: 270 TLYSTNLVISDILFTTALPTRIAYYALGFDWRIGEALCRITALVFYINTYAGVNFMTCLS 449
TLYS NLVISDILFTTALPTRIAYYALGFDWRIG+ALCR+TALVFYINTYAGVNFMTCLS
Sbjct: 63 TLYSMNLVISDILFTTALPTRIAYYALGFDWRIGDALCRVTALVFYINTYAGVNFMTCLS 122
Query: 450 IDRFFAVVHPLRYNKIKRIEHAKCICICVWILVFAQTLPLLIKPMSKQEAKRTTCMEYPN 629
IDRFFAVVHPLRYNKIKRIE+AK +C+ VWILVFAQTLPLL+ PMSK+E +TTCMEYPN
Sbjct: 123 IDRFFAVVHPLRYNKIKRIEYAKGVCLSVWILVFAQTLPLLLTPMSKEEGDKTTCMEYPN 182
Query: 630 FEETQSLPWILLGACFIGYVLPLLIILICYSQICCKLFKTAKQNPLTEKSGVNKKALNTI 809
FE T SLPWILLGAC +GYVLP+ +IL+CYSQICCKLF+TAKQNPLTEKSGVNKKALNTI
Sbjct: 183 FEGTASLPWILLGACLLGYVLPITVILLCYSQICCKLFRTAKQNPLTEKSGVNKKALNTI 242
Query: 810 IFINVGFVVGFXXXXXXXXXXXXRSFIFLTFGNVVKKNSFQIALPITGCLKKFNCCM 980
I I V F++ F + ++SFQI+L T CL FNCCM
Sbjct: 243 ILIIVVFILCFTPYHVAIIQHMIKMLCSPGALECGARHSFQISLHFTVCLMNFNCCM 299
>ref|NP_780325.1| lysophosphatidic acid receptor 6 [Mus musculus].
Length = 344
Score = 120 bits (301), Expect = 2e-27
Identities = 71/242 (29%), Positives = 119/242 (49%), Gaps = 3/242 (1%)
Frame = +3
Query: 261 NSTTLYSTNLVISDILFTTALPTRIAYYALGFDWRIGEALCRITALVFYINTYAGVNFMT 440
N TT Y NL +SD+LF LP RI Y+A +W G+ LC+I+ ++FY N Y + F+T
Sbjct: 50 NETTTYMINLAMSDLLFVFTLPFRIFYFATR-NWPFGDLLCKISVMLFYTNMYGSILFLT 108
Query: 441 CLSIDRFFAVVHPLRYNKIKRIEHAKCICICVWILVFAQTLPLLIKPMSKQEAKRTT--C 614
C+S+DRF A+V+P + ++ +AK +CI VW V + P + + + T+ C
Sbjct: 109 CISVDRFLAIVYPFKSKTLRTKRNAKIVCIAVWFTVMGGSAPAVFFQSTHSQGNNTSEAC 168
Query: 615 ME-YPNFEETQSLPWILLGACFIGYVLPLLIILICYSQICCKLFKTAKQNPLTEKSGVNK 791
E +P L I++ +G+ +PL++ + C S + +T + +S +NK
Sbjct: 169 FENFPAATWKTYLSRIVIFIEIVGFFIPLILNVTCSSMV----LRTLNKPVTLSRSKMNK 224
Query: 792 KALNTIIFINVGFVVGFXXXXXXXXXXXXRSFIFLTFGNVVKKNSFQIALPITGCLKKFN 971
+ +IF+++ + F TF N + + PIT C+ N
Sbjct: 225 TKVLKMIFVHL-VIFCFCFVPYNINLILYSLMRTQTFVNCSVVAAVRTMYPITLCIAVSN 283
Query: 972 CC 977
CC
Sbjct: 284 CC 285
>ref|NP_034300.3| proteinase-activated receptor 3 precursor [Mus musculus].
Length = 369
Score = 117 bits (294), Expect = 1e-26
Identities = 71/229 (31%), Positives = 115/229 (50%), Gaps = 15/229 (6%)
Frame = +3
Query: 99 TTPSQAPQESDCDLYAHHDTARIL--------MPLHYSIVFXXXXXXXXXXXXXXXQNRK 254
T ++ P++S L+ ++ T L +P Y ++F K
Sbjct: 64 TIKAECPEDSISTLHVNNATIGYLRSSLSTQVIPAIYILLFVVGVPANIVTLWKLSLRTK 123
Query: 255 KINSTTLYSTNLVISDILFTTALPTRIAYYALGFDWRIGEALCRITALVFYINTYAGVNF 434
I S ++ TNL I+D+LF LP +IAY+ G +W GE CRIT +VFY N Y +
Sbjct: 124 SI-SLVIFHTNLAIADLLFCVTLPFKIAYHLNGNNWVFGEVTCRITTVVFYGNMYCAILI 182
Query: 435 MTCLSIDRFFAVVHPLRYNKIKRIEHAKCICICVWILVFAQTLPLLIKPMSKQE-----A 599
+TC+ I+R+ A HP Y K+ + + +C VW++VF LP +I KQE +
Sbjct: 183 LTCMGINRYLATAHPFTYQKLPKRSFSMLMCGMVWVMVFLYMLPFVI---LKQEYHLVHS 239
Query: 600 KRTTCMEYPNFEETQS--LPWILLGACFIGYVLPLLIILICYSQICCKL 740
+ TTC + + E+ S + + F G+++P +II+ CY+ + KL
Sbjct: 240 EITTCHDVVDACESPSSFRFYYFVSLAFFGFLIPFVIIIFCYTTLIHKL 288
>ref|NP_067451.2| cysteinyl leukotriene receptor 1 [Mus musculus].
Length = 352
Score = 116 bits (290), Expect = 3e-26
Identities = 60/191 (31%), Positives = 96/191 (50%), Gaps = 1/191 (0%)
Frame = +3
Query: 273 LYSTNLVISDILFTTALPTRIAYYALGFDWRIGEALCRITALVFYINTYAGVNFMTCLSI 452
+Y NL I+D+L LP R+ YY W G+ LCR+T Y+N Y + FMT +S
Sbjct: 75 VYMINLAIADLLCVCTLPLRVVYYVHKGKWLFGDFLCRLTTYALYVNLYCSIFFMTAMSF 134
Query: 453 DRFFAVVHPLRYNKIKRIEHAKCICICVWILVFAQTLPLLIKPMSKQEAKRTTCMEYPNF 632
R A+V P++ + + A+ +CI +WI V + P L+ + E T C E P
Sbjct: 135 FRCVAIVFPVQNINLVTQKKARFVCIGIWIFVILTSSPFLMYKSYQDEKNNTKCFEPPQN 194
Query: 633 EETQSLPWIL-LGACFIGYVLPLLIILICYSQICCKLFKTAKQNPLTEKSGVNKKALNTI 809
+ + IL + F G+++P + I++CY+ I L K N + + +KA+ I
Sbjct: 195 NQAKKYVLILHYVSLFFGFIIPFVTIIVCYTMIILTLLK----NTMKKNMPSRRKAIGMI 250
Query: 810 IFINVGFVVGF 842
I + F+V F
Sbjct: 251 IVVTAAFLVSF 261
>ref|NP_780480.2| lysophosphatidic acid receptor 4 [Mus musculus].
Length = 370
Score = 114 bits (284), Expect = 1e-25
Identities = 77/274 (28%), Positives = 125/274 (45%), Gaps = 9/274 (3%)
Frame = +3
Query: 183 YSIVFXXXXXXXXXXXXXXXQNRKKINSTTLYSTNLVISDILFTTALPTRIAYYALGFDW 362
YS+VF K + T ++ TNL +SD+LF LP +I +Y W
Sbjct: 46 YSVVFILGLITNSASLFVFCFRMKMRSETAIFITNLALSDLLFVCTLPFKI-FYNFNRHW 104
Query: 363 RIGEALCRITALVFYINTYAGVNFMTCLSIDRFFAVVHPLRYNKIKRIEHAKCICICVWI 542
G+ LC+I+ F N Y + F+TC+S+DRF A+V+P R I+ ++ +C VWI
Sbjct: 105 PFGDTLCKISGTAFLTNIYGSMLFLTCISVDRFLAIVYPFRSRTIRTRRNSAIVCAGVWI 164
Query: 543 LVFAQTLPLLIKPMSKQEAKRTTCME-YPNFEETQSLPWILLGACFIGYVLPLLIILICY 719
LV + + + + TTC E + L I + +G+++PL++ + C
Sbjct: 165 LVLSGGISASLFSTTNVNNATTTCFEGFSKRVWKTYLSKITIFIEVVGFIIPLILNVSCS 224
Query: 720 SQICCKLFKTAKQNPLTEKSGVNKKALNTIIFINVG-FVVGFXXXXXXXXXXXXRSFIFL 896
S + +T ++ + G NKK + +I +++ FVV F S +FL
Sbjct: 225 SVV----LRTLRKPATLSQIGTNKKKVLKMITVHMAVFVVCF---------VPYNSVLFL 271
Query: 897 -------TFGNVVKKNSFQIALPITGCLKKFNCC 977
N + + +I PIT CL NCC
Sbjct: 272 YALVRSQAITNCLLERFAKIMYPITLCLATLNCC 305
>ref|NP_001155884.1| cysteinyl leukotriene receptor 2 [Mus musculus].
Length = 309
Score = 113 bits (282), Expect = 3e-25
Identities = 66/223 (29%), Positives = 110/223 (49%)
Frame = +3
Query: 174 PLHYSIVFXXXXXXXXXXXXXXXQNRKKINSTTLYSTNLVISDILFTTALPTRIAYYALG 353
P+ Y I+F Q KK S ++ NL SD LF + LP R YY G
Sbjct: 26 PIIYLIIFFWGALGNGFSIYVFLQTCKKSTSVNVFMLNLATSDFLFISTLPFRADYYFRG 85
Query: 354 FDWRIGEALCRITALVFYINTYAGVNFMTCLSIDRFFAVVHPLRYNKIKRIEHAKCICIC 533
+W G+ CR+ + Y+N Y + F+T LS+ RF A VHP R + + A +C
Sbjct: 86 SNWIFGDLACRVMSYSLYVNMYTSIYFLTVLSVVRFLATVHPFRMFHVTSVRSAWILCGI 145
Query: 534 VWILVFAQTLPLLIKPMSKQEAKRTTCMEYPNFEETQSLPWILLGACFIGYVLPLLIILI 713
+W+ + A + LL+ +++ +C+E + ++ +SL + A +G++LP L + +
Sbjct: 146 IWVFIMASSALLLVNGQEEKD-NIISCLEL-SPQKFKSLLIMNHIAVAVGFLLPFLTLTV 203
Query: 714 CYSQICCKLFKTAKQNPLTEKSGVNKKALNTIIFINVGFVVGF 842
CY I L K + P + ++KAL TI+ + F++ F
Sbjct: 204 CYLLIIRILLKA--EIPESGPRAAHRKALTTIVIAMITFLLCF 244
>ref|NP_598481.2| cysteinyl leukotriene receptor 2 [Mus musculus].
Length = 309
Score = 113 bits (282), Expect = 3e-25
Identities = 66/223 (29%), Positives = 110/223 (49%)
Frame = +3
Query: 174 PLHYSIVFXXXXXXXXXXXXXXXQNRKKINSTTLYSTNLVISDILFTTALPTRIAYYALG 353
P+ Y I+F Q KK S ++ NL SD LF + LP R YY G
Sbjct: 26 PIIYLIIFFWGALGNGFSIYVFLQTCKKSTSVNVFMLNLATSDFLFISTLPFRADYYFRG 85
Query: 354 FDWRIGEALCRITALVFYINTYAGVNFMTCLSIDRFFAVVHPLRYNKIKRIEHAKCICIC 533
+W G+ CR+ + Y+N Y + F+T LS+ RF A VHP R + + A +C
Sbjct: 86 SNWIFGDLACRVMSYSLYVNMYTSIYFLTVLSVVRFLATVHPFRMFHVTSVRSAWILCGI 145
Query: 534 VWILVFAQTLPLLIKPMSKQEAKRTTCMEYPNFEETQSLPWILLGACFIGYVLPLLIILI 713
+W+ + A + LL+ +++ +C+E + ++ +SL + A +G++LP L + +
Sbjct: 146 IWVFIMASSALLLVNGQEEKD-NIISCLEL-SPQKFKSLLIMNHIAVAVGFLLPFLTLTV 203
Query: 714 CYSQICCKLFKTAKQNPLTEKSGVNKKALNTIIFINVGFVVGF 842
CY I L K + P + ++KAL TI+ + F++ F
Sbjct: 204 CYLLIIRILLKA--EIPESGPRAAHRKALTTIVIAMITFLLCF 244
>ref|NP_001020552.1| uracil nucleotide/cysteinyl leukotriene receptor [Mus musculus].
Length = 339
Score = 111 bits (277), Expect = 1e-24
Identities = 60/199 (30%), Positives = 101/199 (50%)
Frame = +3
Query: 246 NRKKINSTTLYSTNLVISDILFTTALPTRIAYYALGFDWRIGEALCRITALVFYINTYAG 425
+ K ++ +L ++D+ LPTR+ Y+ G W GE CR+T +FY+N YA
Sbjct: 59 DHKSGTPANVFLMHLAVADLSCVLVLPTRLVYHFSGNHWPFGEIPCRLTGFLFYLNMYAS 118
Query: 426 VNFMTCLSIDRFFAVVHPLRYNKIKRIEHAKCICICVWILVFAQTLPLLIKPMSKQEAKR 605
+ F+TC+S DRF A+VHP++ K++R +A C +WI+V PLL+ P + Q
Sbjct: 119 IYFLTCISADRFLAIVHPVKSLKLRRPLYAHLACAFLWIVVAVAMAPLLVSPQTVQTNHT 178
Query: 606 TTCMEYPNFEETQSLPWILLGACFIGYVLPLLIILICYSQICCKLFKTAKQNPLTEKSGV 785
C++ + E S L + + + P + + CY I ++ +Q P EK +
Sbjct: 179 VVCLQL--YREKAS--HHALASLAVAFTFPFITTVTCYLLI----IRSLRQGPRIEKH-L 229
Query: 786 NKKALNTIIFINVGFVVGF 842
KA+ I + F++ F
Sbjct: 230 KNKAVRMIAMVLAIFLICF 248
>ref|NP_065646.1| P2Y purinoceptor 4 [Mus musculus].
Length = 361
Score = 110 bits (274), Expect = 2e-24
Identities = 67/249 (26%), Positives = 109/249 (43%)
Frame = +3
Query: 96 FTTPSQAPQESDCDLYAHHDTARILMPLHYSIVFXXXXXXXXXXXXXXXQNRKKINSTTL 275
FT+ +P D D + + IL+PL Y++VF + ++T
Sbjct: 9 FTSLGPSPSSGDGDCKFNEEFKFILLPLSYAVVFVLGLALNAPTLWLFLFRLRPWDATAT 68
Query: 276 YSTNLVISDILFTTALPTRIAYYALGFDWRIGEALCRITALVFYINTYAGVNFMTCLSID 455
Y +L +SD L+ +LPT + YYA W G C+ +FY N Y V F+TC+S+
Sbjct: 69 YMFHLALSDTLYVLSLPTLVYYYAARNHWPFGTGFCKFVRFLFYWNLYCSVLFLTCISVH 128
Query: 456 RFFAVVHPLRYNKIKRIEHAKCICICVWILVFAQTLPLLIKPMSKQEAKRTTCMEYPNFE 635
R+ + HPLR + R A +C+ VW++V +P L + C + E
Sbjct: 129 RYMGICHPLRAIRWGRPRFAGLLCLGVWLVVAGCLVPNLFFVTTNANGTTILCHDTTLPE 188
Query: 636 ETQSLPWILLGACFIGYVLPLLIILICYSQICCKLFKTAKQNPLTEKSGVNKKALNTIIF 815
E + + + P LI L+CY + +L++ P +S ++L TI
Sbjct: 189 EFDHYVYFSSTIMVLLFGFPFLITLVCYGLMARRLYRPL---PGAGQSSSRLRSLRTIAV 245
Query: 816 INVGFVVGF 842
+ F V F
Sbjct: 246 VLTVFAVCF 254
>ref|NP_001001490.1| 2-oxoglutarate receptor 1 [Mus musculus].
Length = 337
Score = 109 bits (273), Expect = 3e-24
Identities = 56/221 (25%), Positives = 103/221 (46%)
Frame = +3
Query: 171 MPLHYSIVFXXXXXXXXXXXXXXXQNRKKINSTTLYSTNLVISDILFTTALPTRIAYYAL 350
+P+ YSI+F + +T+ NL ++D+L+ T+LP I YYA
Sbjct: 36 LPVIYSIIFLVGFPGNTVAISIYIFKMRPWRGSTVIMLNLALTDLLYLTSLPFLIHYYAS 95
Query: 351 GFDWRIGEALCRITALVFYINTYAGVNFMTCLSIDRFFAVVHPLRYNKIKRIEHAKCICI 530
G +W G+ +C+ F+ N Y+ + F+TC S+ R+ ++HP+ I++ A C
Sbjct: 96 GENWIFGDFMCKFIRFGFHFNLYSSILFLTCFSLFRYVVIIHPMSCFSIQKTRWAVVACA 155
Query: 531 CVWILVFAQTLPLLIKPMSKQEAKRTTCMEYPNFEETQSLPWILLGACFIGYVLPLLIIL 710
VW++ +P+ S R+ C++ + ++ ++ W L + LPL+I+
Sbjct: 156 GVWVISLVAVMPMTFLITSTTRTNRSACLDLTSSDDLTTIKWYNLILTATTFCLPLVIVT 215
Query: 711 ICYSQICCKLFKTAKQNPLTEKSGVNKKALNTIIFINVGFV 833
+CY+ I T P T K TI+ + V ++
Sbjct: 216 LCYTTI----ISTLTHGPRTHSCFKQKARRLTILLLLVFYI 252
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 33,043,495
Number of extensions: 889150
Number of successful extensions: 3360
Number of sequences better than 1.0e-05: 188
Number of HSP's gapped: 3158
Number of HSP's successfully gapped: 190
Length of query: 327
Length of database: 15,617,559
Length adjustment: 102
Effective length of query: 225
Effective length of database: 12,553,887
Effective search space: 2824624575
Effective search space used: 2824624575
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-003231
(981 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_003131111.1| PREDICTED: LOW QUALITY PROTEIN: G-protein co... 495 e-140
Alignment gi|XP_003131113.2| PREDICTED: G-protein coupled receptor 183-li... 174 5e-44
Alignment gi|NP_999294.1| cysteinyl leukotriene receptor 1 [Sus scrofa]. 122 4e-28
Alignment gi|XP_003123759.1| PREDICTED: proteinase-activated receptor 3-l... 120 9e-28
Alignment gi|XP_001928973.1| PREDICTED: lysophosphatidic acid receptor 4 ... 114 8e-26
Alignment gi|XP_003360424.1| PREDICTED: lysophosphatidic acid receptor 4 ... 114 8e-26
Alignment gi|NP_999295.1| cysteinyl leukotriene receptor 2 [Sus scrofa]. 114 8e-26
Alignment gi|XP_003361943.1| PREDICTED: 2-oxoglutarate receptor 1-like [S... 112 3e-25
Alignment gi|XP_003135202.2| PREDICTED: p2Y purinoceptor 4 [Sus scrofa]. 108 5e-24
Alignment gi|XP_003129674.1| PREDICTED: p2Y purinoceptor 6-like [Sus scro... 104 9e-23
>ref|XP_003131111.1| PREDICTED: LOW QUALITY PROTEIN: G-protein coupled receptor 183-like
[Sus scrofa].
Length = 356
Score = 495 bits (1275), Expect = e-140
Identities = 249/298 (83%), Positives = 253/298 (84%)
Frame = +3
Query: 87 MDNFTTPSQAPQESDCDLYAHHDTARILMPLHYSIVFXXXXXXXXXXXXXXXQNRKKINS 266
MDNFTTPSQAPQESDCDLY HHDTARILMPLHYSIVF QNRKKINS
Sbjct: 1 MDNFTTPSQAPQESDCDLYXHHDTARILMPLHYSIVFIIGLLGNLLALTVIIQNRKKINS 60
Query: 267 TTLYSTNLVISDILFTTALPTRIAYYALGFDWRIGEALCRITALVFYINTYAGVNFMTCL 446
TTLYSTNLVISDILFTTALPTRIAYYALGFDWRIGEALCRITALVFYINTYAGVNFMTCL
Sbjct: 61 TTLYSTNLVISDILFTTALPTRIAYYALGFDWRIGEALCRITALVFYINTYAGVNFMTCL 120
Query: 447 SIDRFFAVVHPLRYNKIKRIEHAKCICICVWILVFAQTLPLLIKPMSKQEAKRTTCMEYP 626
SIDRFFAVVHPLRYNKIKRIEHAKCICICVWILVFAQTLPLLIKPMSKQEAKRTTCMEYP
Sbjct: 121 SIDRFFAVVHPLRYNKIKRIEHAKCICICVWILVFAQTLPLLIKPMSKQEAKRTTCMEYP 180
Query: 627 NFEETQSLPWILLGACFIGYVLPLLIILICYSQICCKLFKTAKQNPLTEKSGVNKKALNT 806
NFEETQSLPWILLGACFIGYVLPLLIILICYSQICCKLFKTAKQNPLTEKSGVNKKALNT
Sbjct: 181 NFEETQSLPWILLGACFIGYVLPLLIILICYSQICCKLFKTAKQNPLTEKSGVNKKALNT 240
Query: 807 IIFINVGFVVGFXXXXXXXXXXXXRSFIFLTFGNVVKKNSFQIALPITGCLKKFNCCM 980
IIFI V FVV F + F +++SFQIAL IT CL FNCCM
Sbjct: 241 IIFIIVVFVVCFTPYHVAIIQHMIKKLHFPNLLECSERHSFQIALHITVCLMNFNCCM 298
>ref|XP_003131113.2| PREDICTED: G-protein coupled receptor 183-like [Sus scrofa].
Length = 444
Score = 174 bits (442), Expect = 5e-44
Identities = 96/279 (34%), Positives = 142/279 (50%), Gaps = 2/279 (0%)
Frame = +3
Query: 144 AHHD--TARILMPLHYSIVFXXXXXXXXXXXXXXXQNRKKINSTTLYSTNLVISDILFTT 317
+HH + + L Y+ + Q KKINST +Y +L +SD+LFT
Sbjct: 109 SHHPPRAVSVALSLFYAALLVFSALGNILALCLAYQKGKKINSTGIYLVHLAVSDLLFTL 168
Query: 318 ALPTRIAYYALGFDWRIGEALCRITALVFYINTYAGVNFMTCLSIDRFFAVVHPLRYNKI 497
ALP +I YY L F W G A CR+TAL+ Y+NTY+G+ MTC+S+DR AV +
Sbjct: 169 ALPGKIVYYMLDFSWPFGGAFCRLTALILYLNTYSGIYLMTCVSVDRSLAVARARPCPRP 228
Query: 498 KRIEHAKCICICVWILVFAQTLPLLIKPMSKQEAKRTTCMEYPNFEETQSLPWILLGACF 677
+ A+ C+ VW L QT PLL+ PMSK+ A R TCME+ + E LP ++LG
Sbjct: 229 REPGRARLACVAVWALASLQTAPLLLIPMSKRVAGRLTCMEFESVEPVLGLPVLVLGTSA 288
Query: 678 IGYVLPLLIILICYSQICCKLFKTAKQNPLTEKSGVNKKALNTIIFINVGFVVGFXXXXX 857
+ + P I+L CY ++ KL +TA+ +PLT ++A + + V V F
Sbjct: 289 VSFCGPAGILLFCYLKVTLKLCRTAQDSPLTSGKRHYRRACLLTLVVLVAVAVCFVPYHL 348
Query: 858 XXXXXXXRSFIFLTFGNVVKKNSFQIALPITGCLKKFNC 974
R L ++ +F++ L +T C+ NC
Sbjct: 349 NVIQFMVRK--LLRRPTCPEQRAFKLCLQLTVCIMNLNC 385
>ref|NP_999294.1| cysteinyl leukotriene receptor 1 [Sus scrofa].
Length = 340
Score = 122 bits (305), Expect = 4e-28
Identities = 59/191 (30%), Positives = 100/191 (52%), Gaps = 1/191 (0%)
Frame = +3
Query: 273 LYSTNLVISDILFTTALPTRIAYYALGFDWRIGEALCRITALVFYINTYAGVNFMTCLSI 452
+Y NL ++D+L LP R+ YY W G+ LCR++ Y+N Y + FMT +S
Sbjct: 63 VYMINLAVADLLCVCTLPLRVVYYVHKGIWLFGDFLCRLSTYALYVNLYCSIFFMTAMSF 122
Query: 453 DRFFAVVHPLRYNKIKRIEHAKCICICVWILVFAQTLPLLIKPMSKQEAKRTTCMEYPNF 632
R A+V P++ + + AK +CI +WI V + P L+ K E T C E P
Sbjct: 123 FRCIAIVFPVQNINLITHKKAKIVCIAIWIFVILTSSPFLMSTSYKDEKNNTKCFEPPQX 182
Query: 633 EETQSLPWIL-LGACFIGYVLPLLIILICYSQICCKLFKTAKQNPLTEKSGVNKKALNTI 809
+ + +L + F+G+++P +II++CY+ I L K + + ++ + KKA+ I
Sbjct: 183 NQAKYHVLVLHYVSLFVGFIIPFVIIIVCYTMIILTLLKNSMKKNISSR----KKAIGMI 238
Query: 810 IFINVGFVVGF 842
I + F++ F
Sbjct: 239 IVVTAAFLISF 249
>ref|XP_003123759.1| PREDICTED: proteinase-activated receptor 3-like [Sus scrofa].
Length = 378
Score = 120 bits (302), Expect = 9e-28
Identities = 73/224 (32%), Positives = 111/224 (49%), Gaps = 14/224 (6%)
Frame = +3
Query: 99 TTPSQ--APQESDCDLYAHHDT--------ARILMPLHYSIVFXXXXXXXXXXXXXXXQN 248
TTP + P+ES +L+ ++ T + L+P Y +VF
Sbjct: 63 TTPIKIKCPEESVSNLHVNNATMGYLSSSLSTKLIPAIYILVFAVGVPANAVTLWMLFFR 122
Query: 249 RKKINSTTLYSTNLVISDILFTTALPTRIAYYALGFDWRIGEALCRITALVFYINTYAGV 428
+ I T Y TNL I+D LF LP RIAY+ G +W GE +CR T ++FY N Y +
Sbjct: 123 TRSIRMTIFY-TNLAIADFLFCVTLPFRIAYHLNGNNWVFGEVMCRATTVIFYGNMYCSI 181
Query: 429 NFMTCLSIDRFFAVVHPLRYNKIKRIEHAKCICICVWILVFAQTLPLLIKPMSKQEAKR- 605
+ C+SI+R+ A+VHP Y + + +A C VW+ VF LPL I ++
Sbjct: 182 LLLACISINRYLAIVHPFTYRGLPKRTYALLTCGLVWVTVFLYMLPLFILKQEYYLVQQG 241
Query: 606 -TTCMEYPNFEETQS--LPWILLGACFIGYVLPLLIILICYSQI 728
TTC + N E+ S + + F G+++P L+I+ CY+ I
Sbjct: 242 ITTCHDVHNTCESSSPFQLYYFISLAFFGFLIPFLVIIYCYTAI 285
>ref|XP_001928973.1| PREDICTED: lysophosphatidic acid receptor 4 isoform 1 [Sus scrofa].
Length = 408
Score = 114 bits (285), Expect = 8e-26
Identities = 77/274 (28%), Positives = 125/274 (45%), Gaps = 9/274 (3%)
Frame = +3
Query: 183 YSIVFXXXXXXXXXXXXXXXQNRKKINSTTLYSTNLVISDILFTTALPTRIAYYALGFDW 362
YS+VF K + T ++ TNL +SD+LF LP +I +Y W
Sbjct: 84 YSVVFILGLITNSASLFVFCFRMKMRSETAIFITNLALSDLLFVCTLPFKI-FYNFNRHW 142
Query: 363 RIGEALCRITALVFYINTYAGVNFMTCLSIDRFFAVVHPLRYNKIKRIEHAKCICICVWI 542
G+ LC+I+ F N Y + F+TC+S+DRF A+V+P R I+ ++ +C VWI
Sbjct: 143 PFGDTLCKISGTAFLTNIYGSMLFLTCISVDRFLAIVYPFRSRTIRTRRNSAIVCAGVWI 202
Query: 543 LVFAQTLPLLIKPMSKQEAKRTTCME-YPNFEETQSLPWILLGACFIGYVLPLLIILICY 719
+V + + + + TTC E + L I + +G+++PL++ + C
Sbjct: 203 IVLSGGISASLFSTTNVNNATTTCFEGFSKRVWKTYLSKITIFIEVVGFIIPLILNVSCS 262
Query: 720 SQICCKLFKTAKQNPLTEKSGVNKKALNTIIFINVG-FVVGFXXXXXXXXXXXXRSFIFL 896
S + KT ++ + G NKK + +I +++ FVV F S +FL
Sbjct: 263 SVV----LKTLRKPATLSQIGTNKKKVLKMITVHMAVFVVCF---------VPYNSVLFL 309
Query: 897 -------TFGNVVKKNSFQIALPITGCLKKFNCC 977
N + + +I PIT CL NCC
Sbjct: 310 YALVRSQAITNCLLERFAKIMYPITLCLATLNCC 343
>ref|XP_003360424.1| PREDICTED: lysophosphatidic acid receptor 4 [Sus scrofa].
Length = 370
Score = 114 bits (285), Expect = 8e-26
Identities = 77/274 (28%), Positives = 125/274 (45%), Gaps = 9/274 (3%)
Frame = +3
Query: 183 YSIVFXXXXXXXXXXXXXXXQNRKKINSTTLYSTNLVISDILFTTALPTRIAYYALGFDW 362
YS+VF K + T ++ TNL +SD+LF LP +I +Y W
Sbjct: 46 YSVVFILGLITNSASLFVFCFRMKMRSETAIFITNLALSDLLFVCTLPFKI-FYNFNRHW 104
Query: 363 RIGEALCRITALVFYINTYAGVNFMTCLSIDRFFAVVHPLRYNKIKRIEHAKCICICVWI 542
G+ LC+I+ F N Y + F+TC+S+DRF A+V+P R I+ ++ +C VWI
Sbjct: 105 PFGDTLCKISGTAFLTNIYGSMLFLTCISVDRFLAIVYPFRSRTIRTRRNSAIVCAGVWI 164
Query: 543 LVFAQTLPLLIKPMSKQEAKRTTCME-YPNFEETQSLPWILLGACFIGYVLPLLIILICY 719
+V + + + + TTC E + L I + +G+++PL++ + C
Sbjct: 165 IVLSGGISASLFSTTNVNNATTTCFEGFSKRVWKTYLSKITIFIEVVGFIIPLILNVSCS 224
Query: 720 SQICCKLFKTAKQNPLTEKSGVNKKALNTIIFINVG-FVVGFXXXXXXXXXXXXRSFIFL 896
S + KT ++ + G NKK + +I +++ FVV F S +FL
Sbjct: 225 SVV----LKTLRKPATLSQIGTNKKKVLKMITVHMAVFVVCF---------VPYNSVLFL 271
Query: 897 -------TFGNVVKKNSFQIALPITGCLKKFNCC 977
N + + +I PIT CL NCC
Sbjct: 272 YALVRSQAITNCLLERFAKIMYPITLCLATLNCC 305
>ref|NP_999295.1| cysteinyl leukotriene receptor 2 [Sus scrofa].
Length = 345
Score = 114 bits (285), Expect = 8e-26
Identities = 73/227 (32%), Positives = 113/227 (49%)
Frame = +3
Query: 162 RILMPLHYSIVFXXXXXXXXXXXXXXXQNRKKINSTTLYSTNLVISDILFTTALPTRIAY 341
R P+ Y ++F + KK S ++ NL ISD+LFT LP R+ Y
Sbjct: 39 REFYPIVYLVIFIWGALGNGFSIYVFLKPYKKSTSVNVFMLNLAISDLLFTITLPFRVDY 98
Query: 342 YALGFDWRIGEALCRITALVFYINTYAGVNFMTCLSIDRFFAVVHPLRYNKIKRIEHAKC 521
Y G + G+ CRI + Y+N Y+ + F+T LS+ RF A VHP R I++A
Sbjct: 99 YLRGSNXIFGDTPCRIMSYSMYVNMYSSIYFLTVLSVVRFLATVHPFRLLHTTSIKNAWI 158
Query: 522 ICICVWILVFAQTLPLLIKPMSKQEAKRTTCMEYPNFEETQSLPWILLGACFIGYVLPLL 701
+C +WI + A + +L+K S+Q+ T C+E N + L + A +G+VLP
Sbjct: 159 LCGVIWIFIMASS-TVLLKNGSEQKDNVTLCLEL-NSNKVTKLKTMNYVALVVGFVLPFG 216
Query: 702 IILICYSQICCKLFKTAKQNPLTEKSGVNKKALNTIIFINVGFVVGF 842
+ ICY I L K + P + ++KAL T+I + F++ F
Sbjct: 217 TLSICYLLIIRALLKV--EVPESGLRLSHRKALITVIIALIIFLLCF 261
>ref|XP_003361943.1| PREDICTED: 2-oxoglutarate receptor 1-like [Sus scrofa].
Length = 335
Score = 112 bits (280), Expect = 3e-25
Identities = 61/224 (27%), Positives = 104/224 (46%)
Frame = +3
Query: 162 RILMPLHYSIVFXXXXXXXXXXXXXXXQNRKKINSTTLYSTNLVISDILFTTALPTRIAY 341
R +P+ YSI+F + S+T+ NL +D+L+ T+LP I Y
Sbjct: 33 RHYLPVIYSIIFLVGFPGNAVAISTYVFKMRPWRSSTIIMLNLACTDLLYLTSLPFLIHY 92
Query: 342 YALGFDWRIGEALCRITALVFYINTYAGVNFMTCLSIDRFFAVVHPLRYNKIKRIEHAKC 521
YA G +W G+ +C+ F+ N Y+ + F+TC SI R+ ++HP+ ++ A
Sbjct: 93 YASGENWIFGDFMCKFIRFGFHFNLYSSILFLTCFSIFRYLVIIHPMSCFSTRKTRWAAV 152
Query: 522 ICICVWILVFAQTLPLLIKPMSKQEAKRTTCMEYPNFEETQSLPWILLGACFIGYVLPLL 701
C VWI+ A +P+ S R+ C++ + ++ ++ W L + LPL
Sbjct: 153 ACAVVWIVSLAAVMPMTFLITSTTGTNRSACLDLTSSDDLTTIKWYNLILTATTFCLPLA 212
Query: 702 IILICYSQICCKLFKTAKQNPLTEKSGVNKKALNTIIFINVGFV 833
I+ +CY+ I T Q P T K TI+ + V ++
Sbjct: 213 IVTLCYTTI----IYTLTQGPQTHSCLKQKARRLTILLLLVFYI 252
>ref|XP_003135202.2| PREDICTED: p2Y purinoceptor 4 [Sus scrofa].
Length = 365
Score = 108 bits (270), Expect = 5e-24
Identities = 67/260 (25%), Positives = 117/260 (45%), Gaps = 4/260 (1%)
Frame = +3
Query: 75 TDIKMDNFTT--PSQAPQESDC--DLYAHHDTARILMPLHYSIVFXXXXXXXXXXXXXXX 242
T + FTT P P++S+ D + + IL+P+ Y++VF
Sbjct: 2 TSTESSLFTTLGPHSDPEDSEVEPDCRFNEEFKFILLPVSYAVVFVLGLGLNGPTIWLFL 61
Query: 243 QNRKKINSTTLYSTNLVISDILFTTALPTRIAYYALGFDWRIGEALCRITALVFYINTYA 422
+ ++T +Y +L +SD L+ +LPT + YYA W G LC+ +FY N Y
Sbjct: 62 FRLRPWDATAIYMFHLALSDTLYVLSLPTLVYYYAARNHWPFGTGLCKFIRFLFYWNLYC 121
Query: 423 GVNFMTCLSIDRFFAVVHPLRYNKIKRIEHAKCICICVWILVFAQTLPLLIKPMSKQEAK 602
V F+TC+S+ R+ + HPLR + R A +C+ VW++V +P L + +
Sbjct: 122 SVLFLTCISVHRYLGICHPLRALRWGRPRIASLLCLAVWLVVAGCLVPNLFFVTTSTKGD 181
Query: 603 RTTCMEYPNFEETQSLPWILLGACFIGYVLPLLIILICYSQICCKLFKTAKQNPLTEKSG 782
C + EE + + +P ++ L+CY + +L++ P +S
Sbjct: 182 TILCHDTTRPEEFDHYVHFSSAVMGLLFGVPCVVTLVCYGLMARRLYQPL---PGAAQSS 238
Query: 783 VNKKALNTIIFINVGFVVGF 842
++L TI + F + F
Sbjct: 239 TRVRSLRTIAVVLTVFAICF 258
>ref|XP_003129674.1| PREDICTED: p2Y purinoceptor 6-like [Sus scrofa].
Length = 330
Score = 104 bits (259), Expect = 9e-23
Identities = 63/230 (27%), Positives = 108/230 (46%), Gaps = 3/230 (1%)
Frame = +3
Query: 162 RILMPLHYSIVFXXXXXXXXXXXXXXXQNRKKINSTTLYSTNLVISDILFTTALPTRIAY 341
R+L+P YS+V +R+ + T +Y+ NL ++D+L+T +LP I
Sbjct: 28 RLLLPPVYSVVLAAGLPLNACVIAQICTSRRALTRTAVYTLNLALADLLYTCSLPLLIYN 87
Query: 342 YALGFDWRIGEALCRITALVFYINTYAGVNFMTCLSIDRFFAVVHPLR-YNKIKRIEHAK 518
YA G W G+ CR+ +FY N + + F+TC+S R+ + HPL ++K A
Sbjct: 88 YARGDYWPFGDLACRLVRFLFYANLHGSILFLTCISFQRYLGICHPLAPWHKRGGRRAAW 147
Query: 519 CICICVWILVFAQTLPLLIKPMSKQEAKRTTCMEY-PNFEETQSLPWILLGACFIGYVLP 695
+C VW+ V Q LP + + RT C + P T +P+ + IG++LP
Sbjct: 148 LVCGAVWLAVTTQCLPTAHFAATGIQRNRTVCYDLSPPSLATHYMPY-GMALTVIGFLLP 206
Query: 696 LLIILICYSQICCKLF-KTAKQNPLTEKSGVNKKALNTIIFINVGFVVGF 842
+L CY ++ +L + P+ ++ KA + + F + F
Sbjct: 207 FGALLACYCRLARRLCRRDGPAGPVAQER--RDKAARMAVVVAAAFAISF 254
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 24,083,189
Number of extensions: 643867
Number of successful extensions: 2824
Number of sequences better than 1.0e-05: 153
Number of HSP's gapped: 2673
Number of HSP's successfully gapped: 153
Length of query: 327
Length of database: 11,343,932
Length adjustment: 99
Effective length of query: 228
Effective length of database: 8,879,129
Effective search space: 2024441412
Effective search space used: 2024441412
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-003231
(981 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr11 1576 0.0
>Sscrofa_Chr11
|| Length = 87690581
Score = 1576 bits (795), Expect = 0.0
Identities = 894/928 (96%), Gaps = 4/928 (0%)
Strand = Plus / Minus
Query: 55 agagaccctgaacactgccgacggatataaaaatggacaatttcacgaccccctcgcaag 114
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75529880 agagaccctgaacactgccgacggatataaaaatggacaatttcacgaccccctcgcaag 75529821
Query: 115 ctcctcaggaaagtgactgtgacctctacgcccaccatgacacagccaggatcctcatgc 174
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 75529820 ctcctcaggaaagtgactgtgacctctac--ccaccatgacacagccaggatcctcatgc 75529763
Query: 175 ctctgcattacagcatcgtcttcataattgggctcctgggaaacttgttggccctgattg 234
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||
Sbjct: 75529762 ctctgcattacagcatcgtcttcataatcgggctcctgggaaacttgttggccctgactg 75529703
Query: 235 tcattattcaaaacaggnnnnnnntcaactctaccactctatattcaaccaacttggtga 294
||||||||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 75529702 tcattattcaaaacaggaaaaaaataaactctaccactctatattcaaccaacttggtga 75529643
Query: 295 tttcggatatactgtttaccactgctctgcctacacggatagcctactatgcgctgggct 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75529642 tttcggatatactgtttaccactgctctgcctacacggatagcctactatgcgctgggct 75529583
Query: 355 ttgactggagaattggcgaggccttgtgcaggataactgctctcgtgttttatatcaaca 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75529582 ttgactggagaattggcgaggccttgtgcaggataactgctctcgtgttttatatcaaca 75529523
Query: 415 catacgcaggcgtgaacttcatgacctgcctgagtattgaccggttctttgctgtggtgc 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75529522 catacgcaggcgtgaacttcatgacctgcctgagtattgaccggttctttgctgtggtgc 75529463
Query: 475 accccctgcggtacaacaagataaaaagaattgaacatgcaaagtgcatctgcatatgcg 534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75529462 accccctgcggtacaacaagataaaaagaattgaacatgcaaagtgcatctgcatatgcg 75529403
Query: 535 tctggattcttgtatttgctcaaacactccctctgctcataaaacccatgtcaaagcagg 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75529402 tctggattcttgtatttgctcaaacactccctctgctcataaaacccatgtcaaagcagg 75529343
Query: 595 aggctaaaaggactacgtgcatggagtatccaaactttgaggaaacacaatccctcccct 654
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75529342 aggctaaaaggactacgtgcatggagtatccaaactttgaggaaacacaatccctcccct 75529283
Query: 655 ggattctgcttggggcctgtttcatagggtatgtacttccgctcttaatcatcctcatct 714
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75529282 ggattctgcttggggcctgtttcatagggtatgtacttccgctcttaatcatcctcatct 75529223
Query: 715 gctactctcagatctgctgcaaactcttcaaaacggccaaacaaaacccgctaactgaga 774
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 75529222 gctactctcagatctgctgcaaactcttcaaaacggccaaacaaaacccgctaaccgaga 75529163
Query: 775 aatctggtgtaaacaaaaaggctctcaacacaatcattttcataaatgttggttttgttg 834
|||| |||||||||||||||||||||||||||||||||||||||| ||||| |||||||
Sbjct: 75529162 aatccggtgtaaacaaaaaggctctcaacacaatcattttcataattgttgtgtttgttg 75529103
Query: 835 tcggtttcaca-cttaccacgttgccattatccagcacatgattaagaagcttcattttc 893
|| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75529102 tctgtttcacaccttaccacgttgccattatccagcacatgattaagaagcttcattttc 75529043
Query: 894 ctaaccttcgggaatgtagtgnnnnnnnnttcattccaaatagctctgcccatcacgggg 953
|||| |||| ||||||||||| ||||||||| |||||||||| |||||||| |
Sbjct: 75529042 ctaatcttctggaatgtagtg-aaagacattcattccagatagctctgcacatcacggtg 75528984
Query: 954 tgcctgaagaaattcaactgctgcatgg 981
||||||| ||| ||||||||||||||||
Sbjct: 75528983 tgcctgatgaacttcaactgctgcatgg 75528956
Score = 111 bits (56), Expect = 7e-22
Identities = 56/56 (100%)
Strand = Plus / Minus
Query: 1 cagtttgggtgaatactgacggctaccacacagaggccccaacaaggcaccgagag 56
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75542046 cagtttgggtgaatactgacggctaccacacagaggccccaacaaggcaccgagag 75541991
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 29,721,510
Number of extensions: 137
Number of successful extensions: 137
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 135
Number of HSP's successfully gapped: 4
Length of query: 981
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 960
Effective length of database: 2,808,413,156
Effective search space: 2696076629760
Effective search space used: 2696076629760
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 29 (58.0 bits)