Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-003243
(1382 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001069002.1| epoxide hydrolase 2 [Bos taurus]. 660 0.0
Alignment gi|NP_001180105.1| epoxide hydrolase 3 [Bos taurus]. 124 2e-28
Alignment gi|XP_002688608.1| PREDICTED: epoxide hydrolase 3 [Bos taurus]. 124 2e-28
Alignment gi|NP_001069323.2| abhydrolase domain containing 7 [Bos taurus]. 124 2e-28
Alignment gi|NP_001179221.1| acyl-CoA dehydrogenase family member 10 [Bos... 114 3e-25
Alignment gi|XP_002694547.1| PREDICTED: acyl-Coenzyme A dehydrogenase fam... 114 3e-25
Alignment gi|XP_002694625.1| PREDICTED: acyl-Coenzyme A dehydrogenase fam... 110 4e-24
Alignment gi|XP_001788796.1| PREDICTED: acyl-Coenzyme A dehydrogenase fam... 110 4e-24
Alignment gi|NP_001071591.1| abhydrolase domain-containing protein 8 [Bos... 57 5e-08
Alignment gi|NP_001029544.1| abhydrolase domain-containing protein 11 [Bo... 55 1e-07
>ref|NP_001069002.1| epoxide hydrolase 2 [Bos taurus].
Length = 555
Score = 660 bits (1702), Expect = 0.0
Identities = 322/441 (73%), Positives = 370/441 (83%), Gaps = 3/441 (0%)
Frame = +1
Query: 67 VFDLDGVLALPSITTSWARAEEKLALPRGFLNEAFKKGGQDGSVARVMTGEITFSQWVPF 246
VF+L G+L LPS T+ W RAEE+LALP GFL++AF +GG DG RVM GEITFSQWVPF
Sbjct: 7 VFELGGILTLPSATSFWDRAEEELALPGGFLSKAFLRGGPDGPSIRVMKGEITFSQWVPF 66
Query: 247 MEEDCRKCAEDSGIRLSENFSVKHIFDKALSEKKINYPMLQAALTLKKKGFSTCILTNNW 426
MEEDCRKC++D GI L ENFS+K IF+K LS +KINYPMLQAA+TLK+KGF+TCILTN W
Sbjct: 67 MEEDCRKCSKDCGICLPENFSIKQIFEKILSSRKINYPMLQAAVTLKQKGFTTCILTNTW 126
Query: 427 LDDSAQRGSRAQLMCELRPHFDFLIESCRVGMAKPDPQIYKLMLDTLKAEPNEVVFLDDV 606
LDDSA+RGS AQ++CEL+PHFDFLIESC++GM KPDPQIYK +LDTLK P+EVVFLD+
Sbjct: 127 LDDSAERGSLAQVLCELKPHFDFLIESCQIGMVKPDPQIYKFVLDTLKISPSEVVFLDNF 186
Query: 607 GTHLKPVRDLGMATILVRDTDTALRELEKVTGVQLLQTPALPPTSCDPSALSHGYVLIKP 786
T+LKP ++GM TI V DTD AL+ELEKVTGVQLLQT A P SCDPS ++HGYV IKP
Sbjct: 187 ETNLKPAHEMGMVTIFVHDTDAALKELEKVTGVQLLQTSAPQPISCDPSTMTHGYVPIKP 246
Query: 787 GVRLHFVEMGSGPAVCLCHGFPESWFSWRYQIPALAQAGFRVLAVDMKGYGESSAPPEIE 966
GVRLHFVE+GSGP VCLCHGFPESWFSWRYQIPALAQAGFRVLAVDMKGYGESSAPPEIE
Sbjct: 247 GVRLHFVELGSGPVVCLCHGFPESWFSWRYQIPALAQAGFRVLAVDMKGYGESSAPPEIE 306
Query: 967 EYSLEVLCKDMVTFLNKLGLSQAVFIGHDWGSVLVWNMALFYPERVRAVASLNTPFMPSN 1146
EYSLEVL KDM+TFL+KLG+SQAVFIGHDWG +LVW +ALF+PERVRAVASLNTPFMPSN
Sbjct: 307 EYSLEVLSKDMITFLDKLGISQAVFIGHDWGGMLVWTIALFHPERVRAVASLNTPFMPSN 366
Query: 1147 PNVSPMEIIKANPVFDYQLYFKEPGVAEAELEQNLDRTFKT---SSEHMMRLFSHRTKP* 1317
P VS MEIIKA P F+YQLYF+EPGVAEAELE+NL RTFK+ S++ S +
Sbjct: 367 PKVSTMEIIKATPTFNYQLYFQEPGVAEAELEKNLSRTFKSFFRSNDETFITVSRTCE-- 424
Query: 1318 IGKTFLWDPRGTRLSRLFTEE 1380
+G + P LS++ TEE
Sbjct: 425 MGGLLVNTPEEPTLSKMVTEE 445
>ref|NP_001180105.1| epoxide hydrolase 3 [Bos taurus].
Length = 360
Score = 124 bits (312), Expect = 2e-28
Identities = 75/218 (34%), Positives = 120/218 (55%), Gaps = 8/218 (3%)
Frame = +1
Query: 712 LQTPALPPTSC--DPSALSHGYVLIKP-GVRLHFVEMG--SGPAVCLCHGFPESWFSWRY 876
L P P C DP+ H +++++ G+RLH+V G GP + HGFPE+WFSWRY
Sbjct: 56 LGRPRHTPPVCLSDPTLGEHCFLILRSSGLRLHYVSAGRGKGPLMLFLHGFPENWFSWRY 115
Query: 877 QIPALAQAGFRVLAVDMKGYGESSAPPEIEEYSLEVLCKDMVTFLNKLGLSQAVFIGHDW 1056
Q+ Q+ F V+AVD++GYG S AP +++ Y++++L D+ + LG S+ + + HDW
Sbjct: 116 QLREF-QSRFHVVAVDLRGYGPSDAPKDVDCYTIDLLMADIQDVILGLGYSKCILVAHDW 174
Query: 1057 GSVLVWNMALFYPERVRAVASLNTPFMPSNPNVSPMEI---IKANPVFDYQLYFKEPGVA 1227
G++L WN +++YP V + ++ M + S I ++N VF +QL P +
Sbjct: 175 GALLAWNFSIYYPSLVERMVVVSAAPMSVYQDYSLHHIGQFFRSNYVFLFQL----PWLP 230
Query: 1228 EAELEQNLDRTFKTSSEHMMRLFSHRTKP*IGKTFLWD 1341
E L + + KT+ H R T P + FL+D
Sbjct: 231 EKLLSMSDFQILKTTLTHRKRGIPQLT-PSELEAFLYD 267
>ref|XP_002688608.1| PREDICTED: epoxide hydrolase 3 [Bos taurus].
Length = 360
Score = 124 bits (312), Expect = 2e-28
Identities = 75/218 (34%), Positives = 120/218 (55%), Gaps = 8/218 (3%)
Frame = +1
Query: 712 LQTPALPPTSC--DPSALSHGYVLIKP-GVRLHFVEMG--SGPAVCLCHGFPESWFSWRY 876
L P P C DP+ H +++++ G+RLH+V G GP + HGFPE+WFSWRY
Sbjct: 56 LGRPRHTPPVCLSDPTLGEHCFLILRSSGLRLHYVSAGRGKGPLMLFLHGFPENWFSWRY 115
Query: 877 QIPALAQAGFRVLAVDMKGYGESSAPPEIEEYSLEVLCKDMVTFLNKLGLSQAVFIGHDW 1056
Q+ Q+ F V+AVD++GYG S AP +++ Y++++L D+ + LG S+ + + HDW
Sbjct: 116 QLREF-QSRFHVVAVDLRGYGPSDAPKDVDCYTIDLLMADIQDVILGLGYSKCILVAHDW 174
Query: 1057 GSVLVWNMALFYPERVRAVASLNTPFMPSNPNVSPMEI---IKANPVFDYQLYFKEPGVA 1227
G++L WN +++YP V + ++ M + S I ++N VF +QL P +
Sbjct: 175 GALLAWNFSIYYPSLVERMVVVSAAPMSVYQDYSLHHIGQFFRSNYVFLFQL----PWLP 230
Query: 1228 EAELEQNLDRTFKTSSEHMMRLFSHRTKP*IGKTFLWD 1341
E L + + KT+ H R T P + FL+D
Sbjct: 231 EKLLSMSDFQILKTTLTHRKRGIPQLT-PSELEAFLYD 267
>ref|NP_001069323.2| abhydrolase domain containing 7 [Bos taurus].
Length = 362
Score = 124 bits (311), Expect = 2e-28
Identities = 68/169 (40%), Positives = 100/169 (59%), Gaps = 12/169 (7%)
Frame = +1
Query: 733 PTSC--DPSALSHGYVLIKP-GVRLHFVEMGSG--PAVCLCHGFPESWFSWRYQIPALAQ 897
P +C DPS +H YV IK G+R H+V G P + L HGFPE W+SWR+Q+ +
Sbjct: 59 PPACLNDPSLGTHCYVRIKDSGLRFHYVAAGERGKPLMLLLHGFPEFWYSWRHQLREF-K 117
Query: 898 AGFRVLAVDMKGYGESSAPPEIEEYSLEVLCKDMVTFLNKLGLSQAVFIGHDWGSVLVWN 1077
+ +RV+A+D++GYGES AP E Y L+ L D+ L LG S+ V IGHDWG ++ W
Sbjct: 118 SEYRVVALDLRGYGESDAPVHRENYKLDCLITDIKDILESLGYSKCVLIGHDWGGMIAWL 177
Query: 1078 MALFYPERVRAVASLNTPFMPSNPNV-------SPMEIIKANPVFDYQL 1203
+A+ YPE V + +N P +PNV P ++ K++ + +Q+
Sbjct: 178 IAICYPEMVMKLIVINFP----HPNVFTEYILRHPAQLFKSSYYYFFQI 222
>ref|NP_001179221.1| acyl-CoA dehydrogenase family member 10 [Bos taurus].
Length = 1055
Score = 114 bits (284), Expect = 3e-25
Identities = 77/217 (35%), Positives = 119/217 (54%), Gaps = 2/217 (0%)
Frame = +1
Query: 67 VFDLDGVLALPSITTSWARAEEKLALPRGFLNEAFKKGGQDGSVARVMTGEITFSQWVPF 246
+FD+ GVL LPS A E + +P G + +A GG++G + M EIT F
Sbjct: 46 IFDMGGVL-LPSPGRVAAEWEVQNHIPSGTIVKALISGGENGPWMKFMRAEITTED---F 101
Query: 247 MEEDCRKCAEDSGIRLSENFSVKHIFDKALSEKKIN-YPMLQAALT-LKKKGFSTCILTN 420
++E R C+E S + V F SE+ +P++ A+T ++ KG T +L+N
Sbjct: 102 LQEFGRLCSEIS----KTSVPVDSFFSLLTSERVAKQFPVMTEAITQIRAKGLQTAVLSN 157
Query: 421 NWLDDSAQRGSRAQLMCELRPHFDFLIESCRVGMAKPDPQIYKLMLDTLKAEPNEVVFLD 600
N+ + + + R FD ++ESC G+ KPDP++YKL L+ L +P+E +FLD
Sbjct: 158 NFYLPNGK-----SFLPLDRKQFDVVVESCLEGVCKPDPRMYKLCLERLGRQPSESIFLD 212
Query: 601 DVGTHLKPVRDLGMATILVRDTDTALRELEKVTGVQL 711
D+G +LK LG+ TI V D +TA++ELE + G L
Sbjct: 213 DLGPNLKAAAGLGIHTIKVDDPETAVKELETLLGFPL 249
>ref|XP_002694547.1| PREDICTED: acyl-Coenzyme A dehydrogenase family, member 10 [Bos
taurus].
Length = 1055
Score = 114 bits (284), Expect = 3e-25
Identities = 77/217 (35%), Positives = 119/217 (54%), Gaps = 2/217 (0%)
Frame = +1
Query: 67 VFDLDGVLALPSITTSWARAEEKLALPRGFLNEAFKKGGQDGSVARVMTGEITFSQWVPF 246
+FD+ GVL LPS A E + +P G + +A GG++G + M EIT F
Sbjct: 46 IFDMGGVL-LPSPGRVAAEWEVQNHIPSGTIVKALISGGENGPWMKFMRAEITTED---F 101
Query: 247 MEEDCRKCAEDSGIRLSENFSVKHIFDKALSEKKIN-YPMLQAALT-LKKKGFSTCILTN 420
++E R C+E S + V F SE+ +P++ A+T ++ KG T +L+N
Sbjct: 102 LQEFGRLCSEIS----KTSVPVDSFFSLLTSERVAKQFPVMTEAITQIRAKGLQTAVLSN 157
Query: 421 NWLDDSAQRGSRAQLMCELRPHFDFLIESCRVGMAKPDPQIYKLMLDTLKAEPNEVVFLD 600
N+ + + + R FD ++ESC G+ KPDP++YKL L+ L +P+E +FLD
Sbjct: 158 NFYLPNGK-----SFLPLDRKQFDVVVESCLEGVCKPDPRMYKLCLERLGRQPSESIFLD 212
Query: 601 DVGTHLKPVRDLGMATILVRDTDTALRELEKVTGVQL 711
D+G +LK LG+ TI V D +TA++ELE + G L
Sbjct: 213 DLGPNLKAAAGLGIHTIKVDDPETAVKELETLLGFPL 249
>ref|XP_002694625.1| PREDICTED: acyl-Coenzyme A dehydrogenase family, member 10-like
[Bos taurus].
Length = 905
Score = 110 bits (274), Expect = 4e-24
Identities = 77/217 (35%), Positives = 119/217 (54%), Gaps = 2/217 (0%)
Frame = +1
Query: 67 VFDLDGVLALPSITTSWARAEEKLALPRGFLNEAFKKGGQDGSVARVMTGEITFSQWVPF 246
+FD+ GVL LPS A E + +P G + +A GG++G + M EIT F
Sbjct: 46 IFDMGGVL-LPSPGRVAAEWEVQNHIPSGTIVKALISGGENGPWMKFMRAEITTED---F 101
Query: 247 MEEDCRKCAEDSGIRLSENFSVKHIFDKALSEKKIN-YPMLQAALT-LKKKGFSTCILTN 420
++E R C E S + V F SE+ +P++ A+T ++ KG +L+N
Sbjct: 102 LQEFGRLCPEIS----KTSMPVDSFFSLLTSERVAKQFPVMTEAITQIRAKGLQIAVLSN 157
Query: 421 NWLDDSAQRGSRAQLMCELRPHFDFLIESCRVGMAKPDPQIYKLMLDTLKAEPNEVVFLD 600
N+ + ++ L + + FD +IESC G+ KPDP++YKL L+ L +P+E +FLD
Sbjct: 158 NFYLPNG----KSFLPLDWK-QFDVIIESCLEGVCKPDPRMYKLCLEQLGWQPSESIFLD 212
Query: 601 DVGTHLKPVRDLGMATILVRDTDTALRELEKVTGVQL 711
D+G +LK LG+ TI V D +TA++ELE + G L
Sbjct: 213 DLGPNLKAAAGLGIHTIKVNDPETAVKELETLLGFPL 249
>ref|XP_001788796.1| PREDICTED: acyl-Coenzyme A dehydrogenase family, member 10 [Bos
taurus].
Length = 905
Score = 110 bits (274), Expect = 4e-24
Identities = 77/217 (35%), Positives = 119/217 (54%), Gaps = 2/217 (0%)
Frame = +1
Query: 67 VFDLDGVLALPSITTSWARAEEKLALPRGFLNEAFKKGGQDGSVARVMTGEITFSQWVPF 246
+FD+ GVL LPS A E + +P G + +A GG++G + M EIT F
Sbjct: 46 IFDMGGVL-LPSPGRVAAEWEVQNHIPSGTIVKALISGGENGPWMKFMRAEITTED---F 101
Query: 247 MEEDCRKCAEDSGIRLSENFSVKHIFDKALSEKKIN-YPMLQAALT-LKKKGFSTCILTN 420
++E R C E S + V F SE+ +P++ A+T ++ KG +L+N
Sbjct: 102 LQEFGRLCPEIS----KTSMPVDSFFSLLTSERVAKQFPVMTEAITQIRAKGLQIAVLSN 157
Query: 421 NWLDDSAQRGSRAQLMCELRPHFDFLIESCRVGMAKPDPQIYKLMLDTLKAEPNEVVFLD 600
N+ + ++ L + + FD +IESC G+ KPDP++YKL L+ L +P+E +FLD
Sbjct: 158 NFYLPNG----KSFLPLDWK-QFDVIIESCLEGVCKPDPRMYKLCLEQLGWQPSESIFLD 212
Query: 601 DVGTHLKPVRDLGMATILVRDTDTALRELEKVTGVQL 711
D+G +LK LG+ TI V D +TA++ELE + G L
Sbjct: 213 DLGPNLKAAAGLGIHTIKVNDPETAVKELETLLGFPL 249
>ref|NP_001071591.1| abhydrolase domain-containing protein 8 [Bos taurus].
Length = 432
Score = 56.6 bits (135), Expect = 5e-08
Identities = 30/95 (31%), Positives = 45/95 (47%)
Frame = +1
Query: 841 HGFPESWFSWRYQIPALAQAGFRVLAVDMKGYGESSAPPEIEEYSLEVLCKDMVTFLNKL 1020
HG S W+ Q+ + G+ V+A D+ G+G SSAP Y+ L +DM +
Sbjct: 175 HGVGGSLAIWKEQLDFFVRLGYEVVAPDLAGHGASSAPQVAAAYTFYALAEDMRAIFKRY 234
Query: 1021 GLSQAVFIGHDWGSVLVWNMALFYPERVRAVASLN 1125
+ V IGH +G +A YP+ V V +N
Sbjct: 235 AKKRNVLIGHSYGVSFCTFLAHEYPDLVHKVIMIN 269
>ref|NP_001029544.1| abhydrolase domain-containing protein 11 [Bos taurus].
Length = 303
Score = 55.5 bits (132), Expect = 1e-07
Identities = 37/104 (35%), Positives = 53/104 (50%), Gaps = 1/104 (0%)
Frame = +1
Query: 817 SGPAVCLCHGFPESWFSWRYQIPALAQ-AGFRVLAVDMKGYGESSAPPEIEEYSLEVLCK 993
+ PA+ HG S ++ + LAQ G RVL VD + +GESS P++ S E + K
Sbjct: 53 ASPALVFLHGLFGSKTNFNFVAKTLAQQTGRRVLTVDARNHGESSHSPDM---SYEAMSK 109
Query: 994 DMVTFLNKLGLSQAVFIGHDWGSVLVWNMALFYPERVRAVASLN 1125
D+ L LGL V IGH G +AL PE V + +++
Sbjct: 110 DLQDLLPHLGLVPCVLIGHSMGGRTAMLLALQRPELVERLIAVD 153
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 54,274,959
Number of extensions: 1492593
Number of successful extensions: 5107
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 5089
Number of HSP's successfully gapped: 10
Length of query: 460
Length of database: 17,681,374
Length adjustment: 106
Effective length of query: 354
Effective length of database: 14,174,046
Effective search space: 5017612284
Effective search space used: 5017612284
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-003243
(1382 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_534566.1| PREDICTED: similar to epoxide hydrolase 2, cyto... 657 0.0
Alignment gi|XP_857471.1| PREDICTED: similar to epoxide hydrolase 2, cyto... 657 0.0
Alignment gi|XP_857430.1| PREDICTED: similar to epoxide hydrolase 2, cyto... 647 0.0
Alignment gi|XP_857554.1| PREDICTED: similar to epoxide hydrolase 2, cyto... 644 0.0
Alignment gi|XP_547281.2| PREDICTED: similar to abhydrolase domain contai... 113 4e-25
Alignment gi|XP_543398.2| PREDICTED: similar to acyl-Coenzyme A dehydroge... 108 2e-23
Alignment gi|XP_853035.1| PREDICTED: similar to abhydrolase domain contai... 88 2e-17
Alignment gi|XP_541956.2| PREDICTED: similar to abhydrolase domain contai... 57 5e-08
Alignment gi|XP_546921.1| PREDICTED: similar to abhydrolase domain contai... 52 1e-06
Alignment gi|XP_857286.1| PREDICTED: similar to abhydrolase domain contai... 52 1e-06
>ref|XP_534566.1| PREDICTED: similar to epoxide hydrolase 2, cytoplasmic isoform 1
[Canis familiaris].
Length = 556
Score = 657 bits (1696), Expect = 0.0
Identities = 318/401 (79%), Positives = 356/401 (88%)
Frame = +1
Query: 67 VFDLDGVLALPSITTSWARAEEKLALPRGFLNEAFKKGGQDGSVARVMTGEITFSQWVPF 246
VFDLDGVLALPS+ + R E +LALPRGFLNEA + GG DGS AR+M GEITFSQWVP
Sbjct: 7 VFDLDGVLALPSVVGALRRTEAELALPRGFLNEASQTGGPDGSSARLMRGEITFSQWVPL 66
Query: 247 MEEDCRKCAEDSGIRLSENFSVKHIFDKALSEKKINYPMLQAALTLKKKGFSTCILTNNW 426
MEE CRKCAE SGI L ENFSV IF +A + +KIN+PMLQAAL L+KKG++TCILTNNW
Sbjct: 67 MEEGCRKCAEVSGICLPENFSVSQIFGRAAAARKINHPMLQAALALRKKGYTTCILTNNW 126
Query: 427 LDDSAQRGSRAQLMCELRPHFDFLIESCRVGMAKPDPQIYKLMLDTLKAEPNEVVFLDDV 606
LDDS+QRGS AQL+C+L PHF+F+IESCR+ MAKPDPQIYK +LDTLKA P+EVVFLDD+
Sbjct: 127 LDDSSQRGSLAQLVCQLSPHFNFVIESCRISMAKPDPQIYKFVLDTLKASPSEVVFLDDI 186
Query: 607 GTHLKPVRDLGMATILVRDTDTALRELEKVTGVQLLQTPALPPTSCDPSALSHGYVLIKP 786
G +LKP RDLGMATILVRDTD AL EL+KVTGVQLLQT A P C+PS +SH YV IKP
Sbjct: 187 GANLKPARDLGMATILVRDTDPALTELQKVTGVQLLQTAAALPVPCNPSDMSHVYVPIKP 246
Query: 787 GVRLHFVEMGSGPAVCLCHGFPESWFSWRYQIPALAQAGFRVLAVDMKGYGESSAPPEIE 966
GVRLH VE+GSGPAVCLCHGFPESWFSWRYQIPALAQAGFRVLA+DMKGYGESS+PPEIE
Sbjct: 247 GVRLHCVELGSGPAVCLCHGFPESWFSWRYQIPALAQAGFRVLALDMKGYGESSSPPEIE 306
Query: 967 EYSLEVLCKDMVTFLNKLGLSQAVFIGHDWGSVLVWNMALFYPERVRAVASLNTPFMPSN 1146
EYS+EVLC++MVTFL+KLG+ QAVFIGHDWG +LVWNMALFYPERVRAVASLNTPF+P+N
Sbjct: 307 EYSMEVLCQEMVTFLDKLGIPQAVFIGHDWGGMLVWNMALFYPERVRAVASLNTPFVPAN 366
Query: 1147 PNVSPMEIIKANPVFDYQLYFKEPGVAEAELEQNLDRTFKT 1269
PNVS ME IKANPVFDYQLYF+EPGVAEAELEQNL RTFK+
Sbjct: 367 PNVSTMEKIKANPVFDYQLYFQEPGVAEAELEQNLSRTFKS 407
>ref|XP_857471.1| PREDICTED: similar to epoxide hydrolase 2, cytoplasmic isoform 3
[Canis familiaris].
Length = 555
Score = 657 bits (1696), Expect = 0.0
Identities = 318/401 (79%), Positives = 356/401 (88%)
Frame = +1
Query: 67 VFDLDGVLALPSITTSWARAEEKLALPRGFLNEAFKKGGQDGSVARVMTGEITFSQWVPF 246
VFDLDGVLALPS+ + R E +LALPRGFLNEA + GG DGS AR+M GEITFSQWVP
Sbjct: 7 VFDLDGVLALPSVVGALRRTEAELALPRGFLNEASQTGGPDGSSARLMRGEITFSQWVPL 66
Query: 247 MEEDCRKCAEDSGIRLSENFSVKHIFDKALSEKKINYPMLQAALTLKKKGFSTCILTNNW 426
MEE CRKCAE SGI L ENFSV IF +A + +KIN+PMLQAAL L+KKG++TCILTNNW
Sbjct: 67 MEEGCRKCAEVSGICLPENFSVSQIFGRAAAARKINHPMLQAALALRKKGYTTCILTNNW 126
Query: 427 LDDSAQRGSRAQLMCELRPHFDFLIESCRVGMAKPDPQIYKLMLDTLKAEPNEVVFLDDV 606
LDDS+QRGS AQL+C+L PHF+F+IESCR+ MAKPDPQIYK +LDTLKA P+EVVFLDD+
Sbjct: 127 LDDSSQRGSLAQLVCQLSPHFNFVIESCRISMAKPDPQIYKFVLDTLKASPSEVVFLDDI 186
Query: 607 GTHLKPVRDLGMATILVRDTDTALRELEKVTGVQLLQTPALPPTSCDPSALSHGYVLIKP 786
G +LKP RDLGMATILVRDTD AL EL+KVTGVQLLQT A P C+PS +SH YV IKP
Sbjct: 187 GANLKPARDLGMATILVRDTDPALTELQKVTGVQLLQTAAALPVPCNPSDMSHVYVPIKP 246
Query: 787 GVRLHFVEMGSGPAVCLCHGFPESWFSWRYQIPALAQAGFRVLAVDMKGYGESSAPPEIE 966
GVRLH VE+GSGPAVCLCHGFPESWFSWRYQIPALAQAGFRVLA+DMKGYGESS+PPEIE
Sbjct: 247 GVRLHCVELGSGPAVCLCHGFPESWFSWRYQIPALAQAGFRVLALDMKGYGESSSPPEIE 306
Query: 967 EYSLEVLCKDMVTFLNKLGLSQAVFIGHDWGSVLVWNMALFYPERVRAVASLNTPFMPSN 1146
EYS+EVLC++MVTFL+KLG+ QAVFIGHDWG +LVWNMALFYPERVRAVASLNTPF+P+N
Sbjct: 307 EYSMEVLCQEMVTFLDKLGIPQAVFIGHDWGGMLVWNMALFYPERVRAVASLNTPFVPAN 366
Query: 1147 PNVSPMEIIKANPVFDYQLYFKEPGVAEAELEQNLDRTFKT 1269
PNVS ME IKANPVFDYQLYF+EPGVAEAELEQNL RTFK+
Sbjct: 367 PNVSTMEKIKANPVFDYQLYFQEPGVAEAELEQNLSRTFKS 407
>ref|XP_857430.1| PREDICTED: similar to epoxide hydrolase 2, cytoplasmic isoform 2
[Canis familiaris].
Length = 556
Score = 647 bits (1670), Expect = 0.0
Identities = 322/442 (72%), Positives = 366/442 (82%), Gaps = 4/442 (0%)
Frame = +1
Query: 67 VFDLDGVLALPSITTSWARAEEKLALPRGFLNEAFKKGGQDGSVARVMTGEITFSQWVPF 246
VFDLDGVLALPS+ + R E +LALPRGFLNEA + GG DGS AR+M GEITFSQWVP
Sbjct: 7 VFDLDGVLALPSVVGALRRTEAELALPRGFLNEASQTGGPDGSSARLMRGEITFSQWVPL 66
Query: 247 MEEDCRKCAEDSGIRLSENFSVKHIFDKALSEKKINYPMLQAALTLKKKGFSTCILTNNW 426
MEE CRKCAE SGI L ENFSV IF +A + +KIN+PMLQAAL L+KKG++TCILTNNW
Sbjct: 67 MEEGCRKCAEVSGICLPENFSVSQIFGRAAAARKINHPMLQAALALRKKGYTTCILTNNW 126
Query: 427 LDDSAQRGSRAQLMCELRPHFDFLIESCRVGMAKPDPQIYKLMLDTLKAEPNEVVFLDDV 606
LDDS+QRGS AQL+C+L PHF+F+IESCR+ MAKPDPQIYK +LDTLKA P+EVVFLDD+
Sbjct: 127 LDDSSQRGSLAQLVCQLSPHFNFVIESCRISMAKPDPQIYKFVLDTLKASPSEVVFLDDI 186
Query: 607 GTHLKPVRDLGMATILVRDTDTALRELEKVTGVQLLQTPALPPTSCDPSALSHGYVLIKP 786
G +LKP RDLGMATILVRDTD AL EL+KVTGVQ + P C+PS +SH YV IKP
Sbjct: 187 GANLKPARDLGMATILVRDTDPALTELQKVTGVQ--SPKSALPVPCNPSDMSHVYVPIKP 244
Query: 787 GVRLHFVEMGSGPAVCLCHGFPESWFSWRYQIPALAQAGFRVLAVDMKGYGESSAPPEIE 966
GVRLH VE+GSGPAVCLCHGFPESWFSWRYQIPALAQAGFRVLA+DMKGYGESS+PPEIE
Sbjct: 245 GVRLHCVELGSGPAVCLCHGFPESWFSWRYQIPALAQAGFRVLALDMKGYGESSSPPEIE 304
Query: 967 EYSLEVLCKDMVTFLNKLGLSQAVFIGHDWGSVLVWNMALFYPERVRAVASLNTPFMPSN 1146
EYS+EVLC++MVTFL+KLG+ QAVFIGHDWG +LVWNMALFYPERVRAVASLNTPF+P+N
Sbjct: 305 EYSMEVLCQEMVTFLDKLGIPQAVFIGHDWGGMLVWNMALFYPERVRAVASLNTPFVPAN 364
Query: 1147 PNVSPMEIIKANPVFDYQLYFKEPGVAEAELEQNLDRTFKT----SSEHMMRLFSHRTKP 1314
PNVS ME IKANPVFDYQLYF+EPGVAEAELEQNL RTFK+ S ++R
Sbjct: 365 PNVSTMEKIKANPVFDYQLYFQEPGVAEAELEQNLSRTFKSFFRASDGKGFETCANRPAT 424
Query: 1315 *IGKTFLWDPRGTRLSRLFTEE 1380
+G + P LS + TEE
Sbjct: 425 AVGGLLVKTPEEPSLSSIVTEE 446
>ref|XP_857554.1| PREDICTED: similar to epoxide hydrolase 2, cytoplasmic isoform 4
[Canis familiaris].
Length = 554
Score = 644 bits (1661), Expect = 0.0
Identities = 313/401 (78%), Positives = 352/401 (87%)
Frame = +1
Query: 67 VFDLDGVLALPSITTSWARAEEKLALPRGFLNEAFKKGGQDGSVARVMTGEITFSQWVPF 246
VFDLDGVLALPS+ + R E +LALPRGFLNEA + GG DGS AR+M GEITFSQWVP
Sbjct: 7 VFDLDGVLALPSVVGALRRTEAELALPRGFLNEASQTGGPDGSSARLMRGEITFSQWVPL 66
Query: 247 MEEDCRKCAEDSGIRLSENFSVKHIFDKALSEKKINYPMLQAALTLKKKGFSTCILTNNW 426
MEE CRKCAE SGI L ENFSV IF +A + +KIN+PMLQAAL L+KKG++TCILTNNW
Sbjct: 67 MEEGCRKCAEVSGICLPENFSVSQIFGRAAAARKINHPMLQAALALRKKGYTTCILTNNW 126
Query: 427 LDDSAQRGSRAQLMCELRPHFDFLIESCRVGMAKPDPQIYKLMLDTLKAEPNEVVFLDDV 606
LDDS+QRGS AQL+C+L PHF+F+IESCR+ MAKPDPQIYK +LDTLKA P+EVVFLDD+
Sbjct: 127 LDDSSQRGSLAQLVCQLSPHFNFVIESCRISMAKPDPQIYKFVLDTLKASPSEVVFLDDI 186
Query: 607 GTHLKPVRDLGMATILVRDTDTALRELEKVTGVQLLQTPALPPTSCDPSALSHGYVLIKP 786
G +LKP RDLGMATILVRDTD AL EL+KVTGVQ + P C+PS +SH YV IKP
Sbjct: 187 GANLKPARDLGMATILVRDTDPALTELQKVTGVQ--SPKSALPVPCNPSDMSHVYVPIKP 244
Query: 787 GVRLHFVEMGSGPAVCLCHGFPESWFSWRYQIPALAQAGFRVLAVDMKGYGESSAPPEIE 966
GVRLH VE+GSGPAVCLCHGFPESWFSWRYQIPALAQAGFRVLA+DMKGYGESS+PPEIE
Sbjct: 245 GVRLHCVELGSGPAVCLCHGFPESWFSWRYQIPALAQAGFRVLALDMKGYGESSSPPEIE 304
Query: 967 EYSLEVLCKDMVTFLNKLGLSQAVFIGHDWGSVLVWNMALFYPERVRAVASLNTPFMPSN 1146
EYS+EVLC++MVTFL+KLG+ QAVFIGHDWG +LVWNMALFYPERVRAVASLNTPF+P+N
Sbjct: 305 EYSMEVLCQEMVTFLDKLGIPQAVFIGHDWGGMLVWNMALFYPERVRAVASLNTPFVPAN 364
Query: 1147 PNVSPMEIIKANPVFDYQLYFKEPGVAEAELEQNLDRTFKT 1269
PNVS ME IKANPVFDYQLYF+EPGVAEAELEQNL RTFK+
Sbjct: 365 PNVSTMEKIKANPVFDYQLYFQEPGVAEAELEQNLSRTFKS 405
>ref|XP_547281.2| PREDICTED: similar to abhydrolase domain containing 7 [Canis
familiaris].
Length = 327
Score = 113 bits (283), Expect = 4e-25
Identities = 57/148 (38%), Positives = 89/148 (60%), Gaps = 9/148 (6%)
Frame = +1
Query: 787 GVRLHFVEMGSG--PAVCLCHGFPESWFSWRYQIPALAQAGFRVLAVDMKGYGESSAPPE 960
G+R H+V G P + L HGFPE W+SWR+Q+ ++ +RV+A+D++GYGE+ AP
Sbjct: 45 GLRFHYVAAGERGKPLMLLLHGFPEFWYSWRHQLREF-KSEYRVVALDLRGYGETDAPIH 103
Query: 961 IEEYSLEVLCKDMVTFLNKLGLSQAVFIGHDWGSVLVWNMALFYPERVRAVASLNTPFMP 1140
E Y L+ L D+ L+ LG S+ V IGHDWG ++ W +A+ YPE V + +N P
Sbjct: 104 RENYKLDCLITDIKDILDSLGYSKCVLIGHDWGGMIAWLIAICYPEMVMKLIVINFP--- 160
Query: 1141 SNPNV-------SPMEIIKANPVFDYQL 1203
+PNV P ++ K++ + +Q+
Sbjct: 161 -HPNVFTEYILRHPAQLFKSSHYYFFQI 187
>ref|XP_543398.2| PREDICTED: similar to acyl-Coenzyme A dehydrogenase family, member
10 [Canis familiaris].
Length = 619
Score = 108 bits (269), Expect = 2e-23
Identities = 71/216 (32%), Positives = 121/216 (56%), Gaps = 1/216 (0%)
Frame = +1
Query: 67 VFDLDGVLALPSITTSWARAEEKLALPRGFLNEAFKKGGQDGSVARVMTGEITFSQWVPF 246
+FD+ GVL +PS A E + + G + +A+ GG++G + M G IT F
Sbjct: 46 IFDMGGVL-IPSPGRVAAEWELQNHILPGTIQKAWILGGENGPWIKFMRGAITTED---F 101
Query: 247 MEEDCRKCAEDSGIRLSENFSVKHIFDKALSEKKINYPMLQAALT-LKKKGFSTCILTNN 423
++E R C+E S + + + + ++++ +P++ A+T ++ KG T +L+NN
Sbjct: 102 LQEFGRLCSEISKTSVPVGSFLSLLTSEQVAKQ---FPVMTDAITQIRAKGLRTAVLSNN 158
Query: 424 WLDDSAQRGSRAQLMCELRPHFDFLIESCRVGMAKPDPQIYKLMLDTLKAEPNEVVFLDD 603
+ + + + R FD ++ESC G+ KPDP+IY+L L+ L +P+E +FLDD
Sbjct: 159 FYLPNGK-----SFLPLDRKQFDVVVESCLEGVCKPDPRIYRLCLERLGLQPSESIFLDD 213
Query: 604 VGTHLKPVRDLGMATILVRDTDTALRELEKVTGVQL 711
+G +LK LG+ TI V D +TA++ELE + G L
Sbjct: 214 LGPNLKAAASLGIHTIQVNDPETAIKELEALLGFTL 249
>ref|XP_853035.1| PREDICTED: similar to abhydrolase domain containing 9 [Canis
familiaris].
Length = 596
Score = 87.8 bits (216), Expect = 2e-17
Identities = 47/152 (30%), Positives = 84/152 (55%), Gaps = 3/152 (1%)
Frame = +1
Query: 862 FSWRYQIPALAQAGFRVLAVDMKGYGESSAPPEIEEYSLEVLCKDMVTFLNKLGLSQAVF 1041
FSWRYQ+ Q+ F V+A+D++GYG S AP +++ Y++++L D+ + LG S+ +
Sbjct: 347 FSWRYQLWEF-QSRFHVVALDLRGYGPSDAPRDVDCYTIDLLMTDIQDVILGLGYSKCIL 405
Query: 1042 IGHDWGSVLVWNMALFYPERVRAVASLNTPFMPSNPNVSPMEI---IKANPVFDYQLYFK 1212
+ HDWG +L WN +++YP V + ++ M + S + +++N +F +QL
Sbjct: 406 VAHDWGGLLAWNFSIYYPSLVERMVIVSAAPMSVYQDYSVRHVGQFLRSNYIFLFQL--- 462
Query: 1213 EPGVAEAELEQNLDRTFKTSSEHMMRLFSHRT 1308
P + E L + + K++ H R H T
Sbjct: 463 -PWLPEKLLSMSDFQILKSTLTHRKRGIPHLT 493
>ref|XP_541956.2| PREDICTED: similar to abhydrolase domain containing 8 [Canis
familiaris].
Length = 441
Score = 56.6 bits (135), Expect = 5e-08
Identities = 30/95 (31%), Positives = 45/95 (47%)
Frame = +1
Query: 841 HGFPESWFSWRYQIPALAQAGFRVLAVDMKGYGESSAPPEIEEYSLEVLCKDMVTFLNKL 1020
HG S W+ Q+ + G+ V+A D+ G+G SSAP Y+ L +DM +
Sbjct: 184 HGVGGSLAIWKEQLDFFVRLGYEVVAPDLAGHGASSAPQVAAAYTFYALAEDMRAIFKRY 243
Query: 1021 GLSQAVFIGHDWGSVLVWNMALFYPERVRAVASLN 1125
+ V IGH +G +A YP+ V V +N
Sbjct: 244 AKKRNVLIGHSYGVSFCTFLAHEYPDLVHKVIMIN 278
>ref|XP_546921.1| PREDICTED: similar to abhydrolase domain containing 11 isoform 1
isoform 1 [Canis familiaris].
Length = 304
Score = 52.4 bits (124), Expect = 1e-06
Identities = 40/126 (31%), Positives = 60/126 (47%), Gaps = 1/126 (0%)
Frame = +1
Query: 823 PAVCLCHGFPESWFSWRYQIPALAQ-AGFRVLAVDMKGYGESSAPPEIEEYSLEVLCKDM 999
PA+ HG S ++ ALAQ G RVL VD + +G+S PE+ S E + +D+
Sbjct: 56 PALVFLHGLFGSKTNFNSIAKALAQQTGRRVLTVDARNHGDSPHSPEM---SYEAMSQDL 112
Query: 1000 VTFLNKLGLSQAVFIGHDWGSVLVWNMALFYPERVRAVASLNTPFMPSNPNVSPMEIIKA 1179
L +LGL V IGH G +AL PE V + ++ ++SP+E +
Sbjct: 113 QDLLPQLGLVPCVLIGHSMGGKTAMLLALQRPELVERLIAV---------DISPVETTSS 163
Query: 1180 NPVFDY 1197
+ Y
Sbjct: 164 SDFPSY 169
>ref|XP_857286.1| PREDICTED: similar to abhydrolase domain containing 11 isoform 2
isoform 3 [Canis familiaris].
Length = 298
Score = 52.4 bits (124), Expect = 1e-06
Identities = 40/126 (31%), Positives = 60/126 (47%), Gaps = 1/126 (0%)
Frame = +1
Query: 823 PAVCLCHGFPESWFSWRYQIPALAQ-AGFRVLAVDMKGYGESSAPPEIEEYSLEVLCKDM 999
PA+ HG S ++ ALAQ G RVL VD + +G+S PE+ S E + +D+
Sbjct: 50 PALVFLHGLFGSKTNFNSIAKALAQQTGRRVLTVDARNHGDSPHSPEM---SYEAMSQDL 106
Query: 1000 VTFLNKLGLSQAVFIGHDWGSVLVWNMALFYPERVRAVASLNTPFMPSNPNVSPMEIIKA 1179
L +LGL V IGH G +AL PE V + ++ ++SP+E +
Sbjct: 107 QDLLPQLGLVPCVLIGHSMGGKTAMLLALQRPELVERLIAV---------DISPVETTSS 157
Query: 1180 NPVFDY 1197
+ Y
Sbjct: 158 SDFPSY 163
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 56,664,154
Number of extensions: 1537603
Number of successful extensions: 5064
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 5052
Number of HSP's successfully gapped: 10
Length of query: 460
Length of database: 18,874,504
Length adjustment: 106
Effective length of query: 354
Effective length of database: 15,340,888
Effective search space: 5430674352
Effective search space used: 5430674352
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-003243
(1382 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001970.2| epoxide hydrolase 2 [Homo sapiens]. 657 0.0
Alignment gi|NP_775838.3| epoxide hydrolase 4 [Homo sapiens]. 124 2e-28
Alignment gi|NP_001136358.1| epoxide hydrolase 3 precursor [Homo sapiens]. 121 1e-27
Alignment gi|NP_079070.1| epoxide hydrolase 3 precursor [Homo sapiens]. 121 1e-27
Alignment gi|NP_079523.3| acyl-CoA dehydrogenase family member 10 isoform... 119 5e-27
Alignment gi|NP_001130010.1| acyl-CoA dehydrogenase family member 10 isof... 103 4e-22
Alignment gi|NP_078803.4| abhydrolase domain-containing protein 8 [Homo s... 57 5e-08
Alignment gi|NP_683711.1| abhydrolase domain-containing protein 11 isofor... 50 4e-06
Alignment gi|NP_683710.1| abhydrolase domain-containing protein 11 isofor... 50 4e-06
>ref|NP_001970.2| epoxide hydrolase 2 [Homo sapiens].
Length = 555
Score = 657 bits (1696), Expect = 0.0
Identities = 321/442 (72%), Positives = 373/442 (84%), Gaps = 4/442 (0%)
Frame = +1
Query: 67 VFDLDGVLALPSITTSWARAEEKLALPRGFLNEAFKKGGQDGSVARVMTGEITFSQWVPF 246
VFDLDGVLALP++ R EE LALPRG LN+AF+KGG +G+ R+M GEIT SQW+P
Sbjct: 7 VFDLDGVLALPAVFGVLGRTEEALALPRGLLNDAFQKGGPEGATTRLMKGEITLSQWIPL 66
Query: 247 MEEDCRKCAEDSGIRLSENFSVKHIFDKALSEKKINYPMLQAALTLKKKGFSTCILTNNW 426
MEE+CRKC+E + + L +NFS+K IFDKA+S +KIN PMLQAAL L+KKGF+T ILTN W
Sbjct: 67 MEENCRKCSETAKVCLPKNFSIKEIFDKAISARKINRPMLQAALMLRKKGFTTAILTNTW 126
Query: 427 LDDSAQRGSRAQLMCELRPHFDFLIESCRVGMAKPDPQIYKLMLDTLKAEPNEVVFLDDV 606
LDD A+R AQLMCEL+ HFDFLIESC+VGM KP+PQIYK +LDTLKA P+EVVFLDD+
Sbjct: 127 LDDRAERDGLAQLMCELKMHFDFLIESCQVGMVKPEPQIYKFLLDTLKASPSEVVFLDDI 186
Query: 607 GTHLKPVRDLGMATILVRDTDTALRELEKVTGVQLLQTPALPPTSCDPSALSHGYVLIKP 786
G +LKP RDLGM TILV+DTDTAL+ELEKVTG+QLL TPA PTSC+PS +SHGYV +KP
Sbjct: 187 GANLKPARDLGMVTILVQDTDTALKELEKVTGIQLLNTPAPLPTSCNPSDMSHGYVTVKP 246
Query: 787 GVRLHFVEMGSGPAVCLCHGFPESWFSWRYQIPALAQAGFRVLAVDMKGYGESSAPPEIE 966
VRLHFVE+GSGPAVCLCHGFPESW+SWRYQIPALAQAG+RVLA+DMKGYGESSAPPEIE
Sbjct: 247 RVRLHFVELGSGPAVCLCHGFPESWYSWRYQIPALAQAGYRVLAMDMKGYGESSAPPEIE 306
Query: 967 EYSLEVLCKDMVTFLNKLGLSQAVFIGHDWGSVLVWNMALFYPERVRAVASLNTPFMPSN 1146
EY +EVLCK+MVTFL+KLGLSQAVFIGHDWG +LVW MALFYPERVRAVASLNTPF+P+N
Sbjct: 307 EYCMEVLCKEMVTFLDKLGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPFIPAN 366
Query: 1147 PNVSPMEIIKANPVFDYQLYFKEPGVAEAELEQNLDRTFKT----SSEHMMRLFSHRTKP 1314
PN+SP+E IKANPVFDYQLYF+EPGVAEAELEQNL RTFK+ S E ++ + H+
Sbjct: 367 PNMSPLESIKANPVFDYQLYFQEPGVAEAELEQNLSRTFKSLFRASDESVLSM--HKVCE 424
Query: 1315 *IGKTFLWDPRGTRLSRLFTEE 1380
G F+ P LSR+ TEE
Sbjct: 425 -AGGLFVNSPEEPSLSRMVTEE 445
>ref|NP_775838.3| epoxide hydrolase 4 [Homo sapiens].
Length = 362
Score = 124 bits (312), Expect = 2e-28
Identities = 67/169 (39%), Positives = 102/169 (60%), Gaps = 12/169 (7%)
Frame = +1
Query: 733 PTSC--DPSALSHGYVLIKP-GVRLHFVEMGSG--PAVCLCHGFPESWFSWRYQIPALAQ 897
P +C DPS +H YV IK G+R H+V G P + L HGFPE W+SWRYQ+ +
Sbjct: 59 PPACLSDPSLGTHCYVRIKDSGLRFHYVAAGERGKPLMLLLHGFPEFWYSWRYQLREF-K 117
Query: 898 AGFRVLAVDMKGYGESSAPPEIEEYSLEVLCKDMVTFLNKLGLSQAVFIGHDWGSVLVWN 1077
+ +RV+A+D++GYGE+ AP + Y L+ L D+ L+ LG S+ V IGHDWG ++ W
Sbjct: 118 SEYRVVALDLRGYGETDAPIHRQNYKLDCLITDIKDILDSLGYSKCVLIGHDWGGMIAWL 177
Query: 1078 MALFYPERVRAVASLNTPFMPSNPNV-------SPMEIIKANPVFDYQL 1203
+A+ YPE V + +N P +PNV P +++K++ + +Q+
Sbjct: 178 IAICYPEMVMKLIVINFP----HPNVFTEYILRHPAQLLKSSYYYFFQI 222
>ref|NP_001136358.1| epoxide hydrolase 3 precursor [Homo sapiens].
Length = 360
Score = 121 bits (304), Expect = 1e-27
Identities = 66/189 (34%), Positives = 107/189 (56%), Gaps = 3/189 (1%)
Frame = +1
Query: 724 ALPPTSCDPSALSHGYVLIKP-GVRLHFVEMG--SGPAVCLCHGFPESWFSWRYQIPALA 894
A P DPS HG++ +K G+RLH+V G +GP + HGFPE+WFSWRYQ+
Sbjct: 62 ASPACLSDPSLGEHGFLNLKSSGLRLHYVSAGRGNGPLMLFLHGFPENWFSWRYQLREF- 120
Query: 895 QAGFRVLAVDMKGYGESSAPPEIEEYSLEVLCKDMVTFLNKLGLSQAVFIGHDWGSVLVW 1074
Q+ F V+AVD++GYG S AP +++ Y++++L D+ + LG S+ + + HDWG++L W
Sbjct: 121 QSRFHVVAVDLRGYGPSDAPRDVDCYTIDLLLVDIKDVILGLGYSKCILVAHDWGALLAW 180
Query: 1075 NMALFYPERVRAVASLNTPFMPSNPNVSPMEIIKANPVFDYQLYFKEPGVAEAELEQNLD 1254
+ +++YP V + ++ M + S + I Y F+ P + E L +
Sbjct: 181 HFSIYYPSLVERMVVVSGAPMSVYQDYS-LHHISQFFRSHYMFLFQLPWLPEKLLSMSDF 239
Query: 1255 RTFKTSSEH 1281
+ KT+ H
Sbjct: 240 QILKTTLTH 248
>ref|NP_079070.1| epoxide hydrolase 3 precursor [Homo sapiens].
Length = 360
Score = 121 bits (304), Expect = 1e-27
Identities = 66/189 (34%), Positives = 107/189 (56%), Gaps = 3/189 (1%)
Frame = +1
Query: 724 ALPPTSCDPSALSHGYVLIKP-GVRLHFVEMG--SGPAVCLCHGFPESWFSWRYQIPALA 894
A P DPS HG++ +K G+RLH+V G +GP + HGFPE+WFSWRYQ+
Sbjct: 62 ASPACLSDPSLGEHGFLNLKSSGLRLHYVSAGRGNGPLMLFLHGFPENWFSWRYQLREF- 120
Query: 895 QAGFRVLAVDMKGYGESSAPPEIEEYSLEVLCKDMVTFLNKLGLSQAVFIGHDWGSVLVW 1074
Q+ F V+AVD++GYG S AP +++ Y++++L D+ + LG S+ + + HDWG++L W
Sbjct: 121 QSRFHVVAVDLRGYGPSDAPRDVDCYTIDLLLVDIKDVILGLGYSKCILVAHDWGALLAW 180
Query: 1075 NMALFYPERVRAVASLNTPFMPSNPNVSPMEIIKANPVFDYQLYFKEPGVAEAELEQNLD 1254
+ +++YP V + ++ M + S + I Y F+ P + E L +
Sbjct: 181 HFSIYYPSLVERMVVVSGAPMSVYQDYS-LHHISQFFRSHYMFLFQLPWLPEKLLSMSDF 239
Query: 1255 RTFKTSSEH 1281
+ KT+ H
Sbjct: 240 QILKTTLTH 248
>ref|NP_079523.3| acyl-CoA dehydrogenase family member 10 isoform b [Homo sapiens].
Length = 1059
Score = 119 bits (299), Expect = 5e-27
Identities = 79/217 (36%), Positives = 120/217 (55%), Gaps = 2/217 (0%)
Frame = +1
Query: 67 VFDLDGVLALPSITTSWARAEEKLALPRGFLNEAFKKGGQDGSVARVMTGEITFSQWVPF 246
+FD+ GVL +PS A E + +P G + +A +GG++G R M EIT F
Sbjct: 46 IFDMGGVL-IPSPGRVAAEWEVQNRIPSGTILKALMEGGENGPWMRFMRAEITAEG---F 101
Query: 247 MEEDCRKCAEDSGIRLSENFSVKHIFDKALSEKKIN-YPMLQAALT-LKKKGFSTCILTN 420
+ E R C+E L + V F SE+ +P++ A+T ++ KG T +L+N
Sbjct: 102 LREFGRLCSE----MLKTSVPVDSFFSLLTSERVAKQFPVMTEAITQIRAKGLQTAVLSN 157
Query: 421 NWLDDSAQRGSRAQLMCELRPHFDFLIESCRVGMAKPDPQIYKLMLDTLKAEPNEVVFLD 600
N+ ++ + R FD ++ESC G+ KPDP+IYKL L+ L +P+E +FLD
Sbjct: 158 NFY-----LPNQKSFLPLDRKQFDVIVESCMEGICKPDPRIYKLCLEQLGLQPSESIFLD 212
Query: 601 DVGTHLKPVRDLGMATILVRDTDTALRELEKVTGVQL 711
D+GT+LK LG+ TI V D +TA++ELE + G L
Sbjct: 213 DLGTNLKEAARLGIHTIKVNDPETAVKELEALLGFTL 249
>ref|NP_001130010.1| acyl-CoA dehydrogenase family member 10 isoform a [Homo sapiens].
Length = 1090
Score = 103 bits (257), Expect = 4e-22
Identities = 70/197 (35%), Positives = 107/197 (54%), Gaps = 2/197 (1%)
Frame = +1
Query: 67 VFDLDGVLALPSITTSWARAEEKLALPRGFLNEAFKKGGQDGSVARVMTGEITFSQWVPF 246
+FD+ GVL +PS A E + +P G + +A +GG++G R M EIT F
Sbjct: 46 IFDMGGVL-IPSPGRVAAEWEVQNRIPSGTILKALMEGGENGPWMRFMRAEITAEG---F 101
Query: 247 MEEDCRKCAEDSGIRLSENFSVKHIFDKALSEKKIN-YPMLQAALT-LKKKGFSTCILTN 420
+ E R C+E L + V F SE+ +P++ A+T ++ KG T +L+N
Sbjct: 102 LREFGRLCSE----MLKTSVPVDSFFSLLTSERVAKQFPVMTEAITQIRAKGLQTAVLSN 157
Query: 421 NWLDDSAQRGSRAQLMCELRPHFDFLIESCRVGMAKPDPQIYKLMLDTLKAEPNEVVFLD 600
N+ ++ + R FD ++ESC G+ KPDP+IYKL L+ L +P+E +FLD
Sbjct: 158 NFY-----LPNQKSFLPLDRKQFDVIVESCMEGICKPDPRIYKLCLEQLGLQPSESIFLD 212
Query: 601 DVGTHLKPVRDLGMATI 651
D+GT+LK LG+ TI
Sbjct: 213 DLGTNLKEAARLGIHTI 229
>ref|NP_078803.4| abhydrolase domain-containing protein 8 [Homo sapiens].
Length = 439
Score = 56.6 bits (135), Expect = 5e-08
Identities = 30/95 (31%), Positives = 45/95 (47%)
Frame = +1
Query: 841 HGFPESWFSWRYQIPALAQAGFRVLAVDMKGYGESSAPPEIEEYSLEVLCKDMVTFLNKL 1020
HG S W+ Q+ + G+ V+A D+ G+G SSAP Y+ L +DM +
Sbjct: 182 HGVGGSLAIWKEQLDFFVRLGYEVVAPDLAGHGASSAPQVAAAYTFYALAEDMRAIFKRY 241
Query: 1021 GLSQAVFIGHDWGSVLVWNMALFYPERVRAVASLN 1125
+ V IGH +G +A YP+ V V +N
Sbjct: 242 AKKRNVLIGHSYGVSFCTFLAHEYPDLVHKVIMIN 276
>ref|NP_683711.1| abhydrolase domain-containing protein 11 isoform 2 [Homo sapiens].
Length = 308
Score = 50.4 bits (119), Expect = 4e-06
Identities = 34/102 (33%), Positives = 52/102 (50%), Gaps = 1/102 (0%)
Frame = +1
Query: 823 PAVCLCHGFPESWFSWRYQIPALAQ-AGFRVLAVDMKGYGESSAPPEIEEYSLEVLCKDM 999
PAV HG S ++ LAQ G RVL VD + +G+S P++ S E++ +D+
Sbjct: 60 PAVVFLHGLFGSKTNFNSIAKILAQQTGRRVLTVDARNHGDSPHSPDM---SYEIMSQDL 116
Query: 1000 VTFLNKLGLSQAVFIGHDWGSVLVWNMALFYPERVRAVASLN 1125
L +LGL V +GH G +AL PE V + +++
Sbjct: 117 QDLLPQLGLVPCVVVGHSMGGKTAMLLALQRPELVERLIAVD 158
>ref|NP_683710.1| abhydrolase domain-containing protein 11 isoform 1 [Homo sapiens].
Length = 315
Score = 50.4 bits (119), Expect = 4e-06
Identities = 34/102 (33%), Positives = 52/102 (50%), Gaps = 1/102 (0%)
Frame = +1
Query: 823 PAVCLCHGFPESWFSWRYQIPALAQ-AGFRVLAVDMKGYGESSAPPEIEEYSLEVLCKDM 999
PAV HG S ++ LAQ G RVL VD + +G+S P++ S E++ +D+
Sbjct: 67 PAVVFLHGLFGSKTNFNSIAKILAQQTGRRVLTVDARNHGDSPHSPDM---SYEIMSQDL 123
Query: 1000 VTFLNKLGLSQAVFIGHDWGSVLVWNMALFYPERVRAVASLN 1125
L +LGL V +GH G +AL PE V + +++
Sbjct: 124 QDLLPQLGLVPCVVVGHSMGGKTAMLLALQRPELVERLIAVD 165
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 55,672,550
Number of extensions: 1517785
Number of successful extensions: 5046
Number of sequences better than 1.0e-05: 9
Number of HSP's gapped: 5027
Number of HSP's successfully gapped: 9
Length of query: 460
Length of database: 18,297,164
Length adjustment: 106
Effective length of query: 354
Effective length of database: 14,802,980
Effective search space: 5240254920
Effective search space used: 5240254920
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-003243
(1382 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_031966.2| epoxide hydrolase 2 [Mus musculus]. 596 e-170
Alignment gi|NP_001001804.2| epoxide hydrolase 4 [Mus musculus]. 121 1e-27
Alignment gi|NP_001028335.1| epoxide hydrolase 3 [Mus musculus]. 117 3e-26
Alignment gi|NP_082313.2| acyl-CoA dehydrogenase family member 10 [Mus mu... 113 4e-25
Alignment gi|NP_071864.2| abhydrolase domain-containing protein 8 [Mus mu... 57 4e-08
>ref|NP_031966.2| epoxide hydrolase 2 [Mus musculus].
Length = 554
Score = 596 bits (1536), Expect = e-170
Identities = 289/440 (65%), Positives = 355/440 (80%), Gaps = 3/440 (0%)
Frame = +1
Query: 70 FDLDGVLALPSITTSWARAEEKLALPRGFLNEAFKKGGQDGSVARVMTGEITFSQWVPFM 249
FDLDGVLALPSI ++ R+EE LALPR FL A++ +G ++M G+ITFSQWVP M
Sbjct: 8 FDLDGVLALPSIAGAFRRSEEALALPRDFLLGAYQTEFPEGPTEQLMKGKITFSQWVPLM 67
Query: 250 EEDCRKCAEDSGIRLSENFSVKHIFDKALSEKKINYPMLQAALTLKKKGFSTCILTNNWL 429
+E RK ++ G L ENFS+ IF +A++ + IN PMLQAA+ LKKKGF+TCI+TNNWL
Sbjct: 68 DESYRKSSKACGANLPENFSISQIFSQAMAARSINRPMLQAAIALKKKGFTTCIVTNNWL 127
Query: 430 DDSAQRGSRAQLMCELRPHFDFLIESCRVGMAKPDPQIYKLMLDTLKAEPNEVVFLDDVG 609
DD +R S AQ+MCEL HFDFLIESC+VGM KP+PQIY +LDTLKA+PNEVVFLDD G
Sbjct: 128 DDGDKRDSLAQMMCELSQHFDFLIESCQVGMIKPEPQIYNFLLDTLKAKPNEVVFLDDFG 187
Query: 610 THLKPVRDLGMATILVRDTDTALRELEKVTGVQLLQTPALPPTSCDPSALSHGYVLIKPG 789
++LKP RD+GM TILV +T +ALRELEKVTG Q + P P C+P+ +SHGYV +KPG
Sbjct: 188 SNLKPARDMGMVTILVHNTASALRELEKVTGTQFPEAPL--PVPCNPNDVSHGYVTVKPG 245
Query: 790 VRLHFVEMGSGPAVCLCHGFPESWFSWRYQIPALAQAGFRVLAVDMKGYGESSAPPEIEE 969
+RLHFVEMGSGPA+CLCHGFPESWFSWRYQIPALAQAGFRVLA+DMKGYG+SS+PPEIEE
Sbjct: 246 IRLHFVEMGSGPALCLCHGFPESWFSWRYQIPALAQAGFRVLAIDMKGYGDSSSPPEIEE 305
Query: 970 YSLEVLCKDMVTFLNKLGLSQAVFIGHDWGSVLVWNMALFYPERVRAVASLNTPFMPSNP 1149
Y++E+LCK+MVTFL+KLG+ QAVFIGHDW V+VWNMALFYPERVRAVASLNTPFMP +P
Sbjct: 306 YAMELLCKEMVTFLDKLGIPQAVFIGHDWAGVMVWNMALFYPERVRAVASLNTPFMPPDP 365
Query: 1150 NVSPMEIIKANPVFDYQLYFKEPGVAEAELEQNLDRTFKT---SSEHMMRLFSHRTKP*I 1320
+VSPM++I++ PVF+YQLYF+EPGVAEAELE+N+ RTFK+ +S+ + H+ I
Sbjct: 366 DVSPMKVIRSIPVFNYQLYFQEPGVAEAELEKNMSRTFKSFFRASDETGFIAVHKATE-I 424
Query: 1321 GKTFLWDPRGTRLSRLFTEE 1380
G + P LS++ TEE
Sbjct: 425 GGILVNTPEDPNLSKITTEE 444
>ref|NP_001001804.2| epoxide hydrolase 4 [Mus musculus].
Length = 359
Score = 121 bits (304), Expect = 1e-27
Identities = 61/138 (44%), Positives = 87/138 (63%), Gaps = 5/138 (3%)
Frame = +1
Query: 733 PTSC--DPSALSHGYVLIKP-GVRLHFVEMGSG--PAVCLCHGFPESWFSWRYQIPALAQ 897
P +C DPS +H YV IK G+R H+V G P + L HGFPE W+SWR+Q+ +
Sbjct: 57 PPACLNDPSLGTHCYVRIKDSGLRFHYVAAGERGKPLMLLLHGFPEFWYSWRHQLREF-K 115
Query: 898 AGFRVLAVDMKGYGESSAPPEIEEYSLEVLCKDMVTFLNKLGLSQAVFIGHDWGSVLVWN 1077
+ +RV+A+D++GYGES AP E Y L+ L D+ L+ LG S+ V IGHDWG ++ W
Sbjct: 116 SEYRVVALDLRGYGESDAPAHQESYKLDCLIADIKDILDSLGYSKCVLIGHDWGGMIAWL 175
Query: 1078 MALFYPERVRAVASLNTP 1131
+A+ YPE + + +N P
Sbjct: 176 IAVCYPEMIMKLIVINFP 193
>ref|NP_001028335.1| epoxide hydrolase 3 [Mus musculus].
Length = 424
Score = 117 bits (292), Expect = 3e-26
Identities = 63/174 (36%), Positives = 98/174 (56%), Gaps = 15/174 (8%)
Frame = +1
Query: 727 LPPTSC--DPSALSHGYVLIK--------PGVRLHFVEMG--SGPAVCLCHGFPESWFSW 870
L P C DP+ H ++ ++ G+RLH+V G +GP + HGFPE+WFSW
Sbjct: 118 LSPPECLRDPTLGEHCFLTLRVSVPPVKSSGLRLHYVSAGHGNGPLMLFLHGFPENWFSW 177
Query: 871 RYQIPALAQAGFRVLAVDMKGYGESSAPPEIEEYSLEVLCKDMVTFLNKLGLSQAVFIGH 1050
RYQ+ Q+ F V+AVDM+GY S AP E++ Y++++L D+ + LG S+ + + H
Sbjct: 178 RYQLREF-QSHFHVVAVDMRGYSPSDAPKEVDCYTIDLLLDDIKDTILGLGYSKCILVSH 236
Query: 1051 DWGSVLVWNMALFYPERVRAVASLNTPFMPSNPNVSPM---EIIKANPVFDYQL 1203
DWG+ L W +++YP V + N P M S +I ++N +F +QL
Sbjct: 237 DWGASLAWEFSIYYPSLVERMVVANGPPMSVIQEYSIHHIGQIFRSNYMFLFQL 290
>ref|NP_082313.2| acyl-CoA dehydrogenase family member 10 [Mus musculus].
Length = 1069
Score = 113 bits (282), Expect = 4e-25
Identities = 79/220 (35%), Positives = 121/220 (55%), Gaps = 5/220 (2%)
Frame = +1
Query: 67 VFDLDGVLALPSITTSWARAEEKLALPRGFLNEAFKKGGQDGSVARVMTGEITFSQWVPF 246
+FD GVL +PS T E + +P G + +AF +GG G R + GEIT F
Sbjct: 46 IFDTGGVL-VPSPGTVAVGWEVQNHVPSGTIVKAFIRGGDSGPWIRFIKGEITTEH---F 101
Query: 247 MEEDCRKCAE--DSGIRLSENFSVKHIFDKALSEKKIN--YP-MLQAALTLKKKGFSTCI 411
+EE R C+E + + +S FS+ L+ +++ +P M QA ++ KG T +
Sbjct: 102 LEEFGRLCSEIAKTSVPVSSYFSL-------LTSEQVTKQFPVMTQAISQIRAKGLQTAV 154
Query: 412 LTNNWLDDSAQRGSRAQLMCELRPHFDFLIESCRVGMAKPDPQIYKLMLDTLKAEPNEVV 591
LTNN+ S + + R FD ++ESC G+ KPDP+I++L L L +P+E +
Sbjct: 155 LTNNFHLSSGE-----SFLPLDRKQFDVVVESCLEGICKPDPRIFQLCLQRLSLQPSEAI 209
Query: 592 FLDDVGTHLKPVRDLGMATILVRDTDTALRELEKVTGVQL 711
FLDD+G++LK LG+ TI V +TA++ELE + G L
Sbjct: 210 FLDDLGSNLKVAASLGIHTIKVDRPETAVKELEALLGFPL 249
>ref|NP_071864.2| abhydrolase domain-containing protein 8 [Mus musculus].
Length = 439
Score = 56.6 bits (135), Expect = 4e-08
Identities = 30/95 (31%), Positives = 45/95 (47%)
Frame = +1
Query: 841 HGFPESWFSWRYQIPALAQAGFRVLAVDMKGYGESSAPPEIEEYSLEVLCKDMVTFLNKL 1020
HG S W+ Q+ + G+ V+A D+ G+G SSAP Y+ L +DM +
Sbjct: 174 HGVGGSLAIWKEQLDFFVRLGYEVVAPDLAGHGASSAPQVAAAYTFYALAEDMRAIFTRY 233
Query: 1021 GLSQAVFIGHDWGSVLVWNMALFYPERVRAVASLN 1125
+ V IGH +G +A YP+ V V +N
Sbjct: 234 AKKRNVLIGHSYGVSFCTFLAHEYPDLVHKVIMIN 268
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 47,086,034
Number of extensions: 1267013
Number of successful extensions: 4102
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 4085
Number of HSP's successfully gapped: 5
Length of query: 460
Length of database: 15,617,559
Length adjustment: 105
Effective length of query: 355
Effective length of database: 12,463,779
Effective search space: 4424641545
Effective search space used: 4424641545
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-003243
(1382 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001001641.1| epoxide hydrolase 2 [Sus scrofa]. 818 0.0
Alignment gi|XP_003354164.1| PREDICTED: epoxide hydrolase 3-like [Sus scr... 129 3e-30
Alignment gi|XP_003361889.1| PREDICTED: acyl-CoA dehydrogenase family mem... 99 6e-21
Alignment gi|XP_003124460.1| PREDICTED: abhydrolase domain-containing pro... 50 4e-06
Alignment gi|XP_003124459.1| PREDICTED: abhydrolase domain-containing pro... 49 7e-06
>ref|NP_001001641.1| epoxide hydrolase 2 [Sus scrofa].
Length = 555
Score = 818 bits (2112), Expect = 0.0
Identities = 409/440 (92%), Positives = 416/440 (94%), Gaps = 2/440 (0%)
Frame = +1
Query: 67 VFDLDGVLALPSITTSWARAEEKLALPRGFLNEAFKKGGQDGSVARVMTGEITFSQWVPF 246
VFDLDGVLALPSITTSWARAEEKLALPRGFLNEAFKKGGQDGSVARVMTGEITFSQWVPF
Sbjct: 7 VFDLDGVLALPSITTSWARAEEKLALPRGFLNEAFKKGGQDGSVARVMTGEITFSQWVPF 66
Query: 247 MEEDCRKCAEDSGIRLSENFSVKHIFDKALSEKKINYPMLQAALTLKKKGFSTCILTNNW 426
MEEDCRKCAEDSGIRL ENFSVKHIFDKALSEKKINYPMLQAALTLKKKGFSTCILTNNW
Sbjct: 67 MEEDCRKCAEDSGIRLPENFSVKHIFDKALSEKKINYPMLQAALTLKKKGFSTCILTNNW 126
Query: 427 LDDSAQRGSRAQLMCELRPHFDFLIESCRVGMAKPDPQIYKLMLDTLKAEPNEVVFLDDV 606
LDDSAQRGSRAQLMCELRPHFDFLIESCRVGMAKPDPQIYKLMLDTLKAEPNEVVFLDDV
Sbjct: 127 LDDSAQRGSRAQLMCELRPHFDFLIESCRVGMAKPDPQIYKLMLDTLKAEPNEVVFLDDV 186
Query: 607 GTHLKPVRDLGMATILVRDTDTALRELEKVTGVQLLQTPALPPTSCDPSALSHGYVLIKP 786
GTHLKPVRDLGMATILVRDTDTALRELEKVTGVQLLQTPALPPTSCDPSALSHGYVLIKP
Sbjct: 187 GTHLKPVRDLGMATILVRDTDTALRELEKVTGVQLLQTPALPPTSCDPSALSHGYVLIKP 246
Query: 787 GVRLHFVEMGSGPAVCLCHGFPESWFSWRYQIPALAQAGFRVLAVDMKGYGESSAPPEIE 966
GVRLHFVEMGSGPAVCLCHGFPESWFSWRYQIPALAQAGFRVLAVDMKGYGESSAPPEIE
Sbjct: 247 GVRLHFVEMGSGPAVCLCHGFPESWFSWRYQIPALAQAGFRVLAVDMKGYGESSAPPEIE 306
Query: 967 EYSLEVLCKDMVTFLNKLGLSQAVFIGHDWGSVLVWNMALFYPERVRAVASLNTPFMPSN 1146
EYSLEVLCKDMVTFLNKLGLSQAVFIGHDWG VLVWNMALFYPERVRAVASLNTPFMPSN
Sbjct: 307 EYSLEVLCKDMVTFLNKLGLSQAVFIGHDWGGVLVWNMALFYPERVRAVASLNTPFMPSN 366
Query: 1147 PNVSPMEIIKANPVFDYQLYFKEPGVAEAELEQNLDRTFKT--SSEHMMRLFSHRTKP*I 1320
PNVSPMEIIKANPVFDYQLYF+EPGVAEAELEQNLDRTFK + L ++R + +
Sbjct: 367 PNVSPMEIIKANPVFDYQLYFQEPGVAEAELEQNLDRTFKNFFRAHDETFLTTNRVRE-L 425
Query: 1321 GKTFLWDPRGTRLSRLFTEE 1380
G F+ P LSRL TEE
Sbjct: 426 GGLFVGTPEEPSLSRLVTEE 445
>ref|XP_003354164.1| PREDICTED: epoxide hydrolase 3-like [Sus scrofa].
Length = 360
Score = 129 bits (325), Expect = 3e-30
Identities = 77/215 (35%), Positives = 120/215 (55%), Gaps = 8/215 (3%)
Frame = +1
Query: 721 PALPPTSC--DPSALSHGYVLIKP-GVRLHFVEMG--SGPAVCLCHGFPESWFSWRYQIP 885
P P +C DP+ H ++ +K GV LH+V G +GP + HGFPE+WFSWRYQI
Sbjct: 59 PRRTPPACLNDPTLGEHCFLTLKSSGVHLHYVSAGRGNGPLMLFLHGFPENWFSWRYQIR 118
Query: 886 ALAQAGFRVLAVDMKGYGESSAPPEIEEYSLEVLCKDMVTFLNKLGLSQAVFIGHDWGSV 1065
Q+ F V+AVD++GYG S AP +++ Y++++L D+ + LG S+ + + HDWG++
Sbjct: 119 EF-QSHFHVVAVDLRGYGSSDAPSDMDCYTIDLLMADIQDVILGLGYSKCILVAHDWGAL 177
Query: 1066 LVWNMALFYPERVRAVASLNTPFMPSNPNVSPMEI---IKANPVFDYQLYFKEPGVAEAE 1236
L WN +++YP V + ++ M + S I ++N VF +QL P + E
Sbjct: 178 LAWNFSIYYPSLVERMVVVSAAPMSVYQDYSMRHISQFFRSNYVFLFQL----PWLPEKL 233
Query: 1237 LEQNLDRTFKTSSEHMMRLFSHRTKP*IGKTFLWD 1341
L + + KT+ H R H T P + FL+D
Sbjct: 234 LSMSDFQILKTTLTHRKRGIPHLT-PNELEAFLYD 267
>ref|XP_003361889.1| PREDICTED: acyl-CoA dehydrogenase family member 10-like, partial
[Sus scrofa].
Length = 230
Score = 99.0 bits (245), Expect = 6e-21
Identities = 65/198 (32%), Positives = 109/198 (55%), Gaps = 3/198 (1%)
Frame = +1
Query: 67 VFDLDGVLALPSITTSWARAEEKLALPRGFLNEAFKKGGQDGSVARVMTGEITFSQWVPF 246
+FD+ GVL +PS A E + +P G + +A GG++G + M EIT F
Sbjct: 46 IFDMGGVL-IPSPGKMAAEWEVRNHIPSGTVLKALSSGGENGPWMKFMRAEITIED---F 101
Query: 247 MEEDCRKCAEDSGIRLSENFSVKHIFDKALSEKKI--NYPMLQAALT-LKKKGFSTCILT 417
++E + C+E S +S +F F L+ +++ +P++ A+T ++ KG T +L+
Sbjct: 102 LQEFRKLCSEISKTDMSVDF-----FSFLLTNEQVVKQFPVMTEAITQIRAKGLQTALLS 156
Query: 418 NNWLDDSAQRGSRAQLMCELRPHFDFLIESCRVGMAKPDPQIYKLMLDTLKAEPNEVVFL 597
NN+ + + + R FD ++ESC G+ KPDP+IYKL L+ L +P+E + L
Sbjct: 157 NNFFLPNGK-----SFLPLDRKQFDVVVESCLEGICKPDPRIYKLCLERLGRKPSECILL 211
Query: 598 DDVGTHLKPVRDLGMATI 651
+D+G +LK LG+ TI
Sbjct: 212 EDLGPNLKAAASLGIHTI 229
>ref|XP_003124460.1| PREDICTED: abhydrolase domain-containing protein 11-like isoform 2
[Sus scrofa].
Length = 297
Score = 49.7 bits (117), Expect = 4e-06
Identities = 46/136 (33%), Positives = 65/136 (47%), Gaps = 1/136 (0%)
Frame = +1
Query: 721 PALPPTSCDPSALSHGYVLIKPGVRLHFVEMGSGPAVCLCHGFPESWFSWRYQIPALAQ- 897
P+ P S P ALS +P L E+ P V L HG S ++ ALAQ
Sbjct: 17 PSSPSFSRVPVALSSSQGGTEPRSLLDG-EVARPPLVFL-HGLFGSKANFSSIAKALAQQ 74
Query: 898 AGFRVLAVDMKGYGESSAPPEIEEYSLEVLCKDMVTFLNKLGLSQAVFIGHDWGSVLVWN 1077
G RVL VD + +G+S P++ S E + +D+ L +LGL V IGH G
Sbjct: 75 TGRRVLTVDARNHGDSPHSPDM---SYEAMSQDLQDLLPQLGLVPCVLIGHSMGGKTAML 131
Query: 1078 MALFYPERVRAVASLN 1125
+AL PE V + +++
Sbjct: 132 LALQRPELVERLIAVD 147
>ref|XP_003124459.1| PREDICTED: abhydrolase domain-containing protein 11-like isoform 1
[Sus scrofa].
Length = 303
Score = 48.9 bits (115), Expect = 7e-06
Identities = 46/141 (32%), Positives = 66/141 (46%), Gaps = 6/141 (4%)
Frame = +1
Query: 721 PALPPTSCDPSALSHGYVLIKP-----GVRLHFVEMGSGPAVCLCHGFPESWFSWRYQIP 885
P+ P S P ALS +P +L E+ P V L HG S ++
Sbjct: 17 PSSPSFSRVPVALSSSQGGTEPRPVPLSYKLLDGEVARPPLVFL-HGLFGSKANFSSIAK 75
Query: 886 ALAQ-AGFRVLAVDMKGYGESSAPPEIEEYSLEVLCKDMVTFLNKLGLSQAVFIGHDWGS 1062
ALAQ G RVL VD + +G+S P++ S E + +D+ L +LGL V IGH G
Sbjct: 76 ALAQQTGRRVLTVDARNHGDSPHSPDM---SYEAMSQDLQDLLPQLGLVPCVLIGHSMGG 132
Query: 1063 VLVWNMALFYPERVRAVASLN 1125
+AL PE V + +++
Sbjct: 133 KTAMLLALQRPELVERLIAVD 153
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 34,983,904
Number of extensions: 957814
Number of successful extensions: 3187
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 3180
Number of HSP's successfully gapped: 5
Length of query: 460
Length of database: 11,343,932
Length adjustment: 102
Effective length of query: 358
Effective length of database: 8,804,438
Effective search space: 3151988804
Effective search space used: 3151988804
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-003243
(1382 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr14 385 e-104
>Sscrofa_Chr14
|| Length = 153851969
Score = 385 bits (194), Expect = e-104
Identities = 194/194 (100%)
Strand = Plus / Plus
Query: 394 ggattttcaacctgcatcctcaccaacaactggctggatgacagcgcccagagaggcagc 453
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12430431 ggattttcaacctgcatcctcaccaacaactggctggatgacagcgcccagagaggcagc 12430490
Query: 454 cgggcccagttgatgtgtgagctcagaccacacttcgacttcctgattgagtcatgcagg 513
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12430491 cgggcccagttgatgtgtgagctcagaccacacttcgacttcctgattgagtcatgcagg 12430550
Query: 514 gtcggaatggccaagcctgaccctcagatctacaagctcatgctggacaccttgaaggcc 573
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12430551 gtcggaatggccaagcctgaccctcagatctacaagctcatgctggacaccttgaaggcc 12430610
Query: 574 gaacccaacgaggt 587
||||||||||||||
Sbjct: 12430611 gaacccaacgaggt 12430624
Score = 317 bits (160), Expect = 9e-84
Identities = 163/164 (99%)
Strand = Plus / Plus
Query: 232 cagtgggtgcccttcatggaagaagactgcaggaagtgtgctgaggactcgggaatacgc 291
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12428765 cagtgggtgcccttcatggaagaagactgcaggaagtgtgctgaggactcgggaatacgc 12428824
Query: 292 ctgtctgagaatttctccgtaaagcacatctttgacaaggcgctttcagagaaaaagatc 351
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12428825 ctgcctgagaatttctccgtaaagcacatctttgacaaggcgctttcagagaaaaagatc 12428884
Query: 352 aactaccccatgctgcaggccgctctcactctcaaaaagaaggg 395
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12428885 aactaccccatgctgcaggccgctctcactctcaaaaagaaggg 12428928
Score = 270 bits (136), Expect = 2e-69
Identities = 145/148 (97%)
Strand = Plus / Plus
Query: 2 ctttttgcgactcctccgagcgcttcgagtccgaggcggaggccgccatggcgctgcgag 61
||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||
Sbjct: 12397734 ctttttgcgactcctccaagcgcttcgagtccgaggaggaggccgccatggcgctgcgag 12397793
Query: 62 cagcggtgttcgacctggacggggtcctggcactgccatcgatcaccacctcctgggccc 121
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12397794 cggcggtgttcgacctggacggggtcctggcactgccatcgatcaccacctcctgggccc 12397853
Query: 122 gcgccgaggagaagctggcgctgcccag 149
||||||||||||||||||||||||||||
Sbjct: 12397854 gcgccgaggagaagctggcgctgcccag 12397881
Score = 232 bits (117), Expect = 4e-58
Identities = 123/125 (98%)
Strand = Plus / Plus
Query: 584 aggttgttttcctggatgatgtcgggactcatctgaagccagtccgtgacctgggcatgg 643
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12433379 aggttgttttcctggatgatgtcgggactcatctgaagccagtccgtgacctgggcatgg 12433438
Query: 644 ccaccattctcgtccgcgacactgacacggccctgagggagctggagaaagtgactggag 703
||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12433439 ccaccatcctcgtccacgacactgacacggccctgagggagctggagaaagtgactggag 12433498
Query: 704 tgcag 708
|||||
Sbjct: 12433499 tgcag 12433503
Score = 212 bits (107), Expect = 4e-52
Identities = 113/115 (98%)
Strand = Plus / Plus
Query: 1105 agggcggtggccagtctgaatactcccttcatgccatcaaatcccaatgtgtcccccatg 1164
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 12452917 agggcggtggccagtctgaatactcccttcatgccatcaaatcccaatgtgtccccaatg 12452976
Query: 1165 gagatcatcaaagccaatcctgtctttgattaccagctctacttcaaagagccgg 1219
||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 12452977 gagatcatcaaagccaatcctgtctttgattaccagctctacttccaagagccgg 12453031
Score = 178 bits (90), Expect = 5e-42
Identities = 96/98 (97%)
Strand = Plus / Plus
Query: 782 agcctggggtacgtctgcattttgtggagatgggctccggccctgctgtgtgcctctgcc 841
||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||
Sbjct: 12439795 agcctggggtacgtctgcattttgtggagatgggctctggccctgccgtgtgcctctgcc 12439854
Query: 842 atggatttcctgagagctggttctcttggaggtaccag 879
||||||||||||||||||||||||||||||||||||||
Sbjct: 12439855 atggatttcctgagagctggttctcttggaggtaccag 12439892
Score = 176 bits (89), Expect = 2e-41
Identities = 89/89 (100%)
Strand = Plus / Plus
Query: 146 ccagaggttttctgaatgaagctttcaagaaaggaggccaggatggctccgttgctcgcg 205
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12418362 ccagaggttttctgaatgaagctttcaagaaaggaggccaggatggctccgttgctcgcg 12418421
Query: 206 tgatgacgggagagatcacgttttcgcag 234
|||||||||||||||||||||||||||||
Sbjct: 12418422 tgatgacgggagagatcacgttttcgcag 12418450
Score = 167 bits (84), Expect = 2e-38
Identities = 87/88 (98%)
Strand = Plus / Plus
Query: 1020 gggcctctctcaagccgtgttcattggccacgactggggaagcgtgctggtgtggaacat 1079
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 12449322 gggcctctctcaagccgtgttcattggccacgactggggaggcgtgctggtgtggaacat 12449381
Query: 1080 ggctctcttctaccctgagagagtgagg 1107
||||||||||||||||||||||||||||
Sbjct: 12449382 ggctctcttctaccctgagagagtgagg 12449409
Score = 161 bits (81), Expect = 1e-36
Identities = 81/81 (100%)
Strand = Plus / Plus
Query: 878 agatccctgccctggcccaggcgggcttccgggtgctggctgtggacatgaaaggctatg 937
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12440414 agatccctgccctggcccaggcgggcttccgggtgctggctgtggacatgaaaggctatg 12440473
Query: 938 gagagtcatctgctcctcccg 958
|||||||||||||||||||||
Sbjct: 12440474 gagagtcatctgctcctcccg 12440494
Score = 155 bits (78), Expect = 8e-35
Identities = 78/78 (100%)
Strand = Plus / Plus
Query: 706 cagcttctccaaactccagcccttcctcccacctcctgcgatccgagcgccctgagccac 765
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12437801 cagcttctccaaactccagcccttcctcccacctcctgcgatccgagcgccctgagccac 12437860
Query: 766 gggtacgtgctcatcaag 783
||||||||||||||||||
Sbjct: 12437861 gggtacgtgctcatcaag 12437878
Score = 121 bits (61), Expect = 1e-24
Identities = 71/73 (97%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 1218 gggagtggcggaagctgaactggaacagaacctggatcggactttc-aaaacttcttcag 1276
|||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 12462775 gggagtggcggaggctgaactggaacagaacctggatcggactttcaaaaacttcttcag 12462834
Query: 1277 agcacatgatgag 1289
|||||||||||||
Sbjct: 12462835 agcacatgatgag 12462847
Score = 61.9 bits (31), Expect = 9e-07
Identities = 44/47 (93%), Gaps = 1/47 (2%)
Strand = Plus / Plus
Query: 1337 gggaccccagaggaaccc-gcctcagcaggctattcaccgaggagga 1382
|||||||||||||| ||| |||||||||||||| |||||||||||||
Sbjct: 12466962 gggaccccagaggagcccagcctcagcaggctagtcaccgaggagga 12467008
Score = 60.0 bits (30), Expect = 3e-06
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 992 aggacatggtgaccttcctgaataagttgg 1021
||||||||||||||||||||||||||||||
Sbjct: 12447508 aggacatggtgaccttcctgaataagttgg 12447537
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 38,777,867
Number of extensions: 333
Number of successful extensions: 333
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 332
Number of HSP's successfully gapped: 13
Length of query: 1382
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1361
Effective length of database: 2,808,413,156
Effective search space: 3822250305316
Effective search space used: 3822250305316
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)