Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-003361
(1110 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001156611.1| glutathione peroxidase 2 [Bos taurus]. 389 e-108
Alignment gi|NP_776501.1| glutathione peroxidase 1 [Bos taurus]. 248 5e-66
Alignment gi|NP_001020506.2| epididymal secretory glutathione peroxidase ... 156 3e-38
Alignment gi|NP_001156614.1| glutathione peroxidase 6 [Bos taurus]. 150 2e-36
Alignment gi|NP_776502.1| glutathione peroxidase 3 precursor [Bos taurus]. 149 3e-36
Alignment gi|NP_777195.1| phospholipid hydroperoxide glutathione peroxida... 90 3e-18
Alignment gi|NP_001094583.1| glutathione peroxidase 7 precursor [Bos taur... 86 8e-17
Alignment gi|NP_001039553.1| probable glutathione peroxidase 8 [Bos tauru... 80 4e-15
>ref|NP_001156611.1| glutathione peroxidase 2 [Bos taurus].
Length = 190
Score = 389 bits (1000), Expect = e-108
Identities = 187/190 (98%), Positives = 188/190 (98%)
Frame = +3
Query: 168 MAYIAKSFYDLSAISLDGEKVDFNTFRGRAVLIENVASL*GTTTRDFTQLNELQCRFPRR 347
MAYIAKSFYDLSAISLDGEKVDFNTFRGRAVLIENVASL GTTTRDFTQLNELQCRFPRR
Sbjct: 1 MAYIAKSFYDLSAISLDGEKVDFNTFRGRAVLIENVASLUGTTTRDFTQLNELQCRFPRR 60
Query: 348 LVVLGFPCNQFGHQENCQNEEILNSLKYVRPGGGFQPTFTLIQKCDVNGQNEHPVFAYLK 527
LVVLGFPCNQFGHQENCQNEEILNSLKYVRPGGGFQPTFTL+QKCDVNGQNEHPVFAYLK
Sbjct: 61 LVVLGFPCNQFGHQENCQNEEILNSLKYVRPGGGFQPTFTLVQKCDVNGQNEHPVFAYLK 120
Query: 528 DKLPYPYDDPFSLMTDPKFIIWSPVRRSDVSWNFEKFLIGPEGEPFRRYSRTFPTINIEP 707
DKLPYPYDDPFSLMTDPKFIIWSPVRRSDVSWNFEKFLIGPEGEPFRRYSRTF TINIEP
Sbjct: 121 DKLPYPYDDPFSLMTDPKFIIWSPVRRSDVSWNFEKFLIGPEGEPFRRYSRTFQTINIEP 180
Query: 708 DIKRLLKVAI 737
DIKRLLKVAI
Sbjct: 181 DIKRLLKVAI 190
>ref|NP_776501.1| glutathione peroxidase 1 [Bos taurus].
Length = 205
Score = 248 bits (634), Expect = 5e-66
Identities = 121/183 (66%), Positives = 146/183 (79%), Gaps = 2/183 (1%)
Frame = +3
Query: 183 KSFYDLSAISL-DGEKVDFNTFRGRAVLIENVASL*GTTTRDFTQLNELQCRF-PRRLVV 356
++ Y SA L GE + ++ RG+ +LIENVASL GTT RD+TQ+N+LQ R PR LVV
Sbjct: 17 RTVYAFSARPLAGGEPFNLSSLRGKVLLIENVASLUGTTVRDYTQMNDLQRRLGPRGLVV 76
Query: 357 LGFPCNQFGHQENCQNEEILNSLKYVRPGGGFQPTFTLIQKCDVNGQNEHPVFAYLKDKL 536
LGFPCNQFGHQEN +NEEILN LKYVRPGGGF+P F L +KC+VNG+ HP+FA+L++ L
Sbjct: 77 LGFPCNQFGHQENAKNEEILNCLKYVRPGGGFEPNFMLFEKCEVNGEKAHPLFAFLREVL 136
Query: 537 PYPYDDPFSLMTDPKFIIWSPVRRSDVSWNFEKFLIGPEGEPFRRYSRTFPTINIEPDIK 716
P P DD +LMTDPKFI WSPV R+DVSWNFEKFL+GP+G P RRYSR F TI+IEPDI+
Sbjct: 137 PTPSDDATALMTDPKFITWSPVCRNDVSWNFEKFLVGPDGVPVRRYSRRFLTIDIEPDIE 196
Query: 717 RLL 725
LL
Sbjct: 197 TLL 199
>ref|NP_001020506.2| epididymal secretory glutathione peroxidase [Bos taurus].
Length = 219
Score = 156 bits (395), Expect = 3e-38
Identities = 84/183 (45%), Positives = 110/183 (60%), Gaps = 2/183 (1%)
Frame = +3
Query: 186 SFYDLSAISLDG-EKVDFNTFRGRAVLIENVASL*GTTTRDFTQLNELQCRF-PRRLVVL 359
+ YD A +L+G E + F + G+ VL NVA+ G T + + +LN LQ P LVVL
Sbjct: 37 TIYDYDAFTLNGKEHIQFKQYAGKHVLFVNVATYCGLTAQ-YPELNALQEELKPFGLVVL 95
Query: 360 GFPCNQFGHQENCQNEEILNSLKYVRPGGGFQPTFTLIQKCDVNGQNEHPVFAYLKDKLP 539
GFPCNQFG QE +N EIL LKYVRPGGG+ P F L +K DVNG+ E VF +LK P
Sbjct: 96 GFPCNQFGKQEPGENSEILPGLKYVRPGGGYVPNFQLFEKGDVNGETEQKVFTFLKQSCP 155
Query: 540 YPYDDPFSLMTDPKFIIWSPVRRSDVSWNFEKFLIGPEGEPFRRYSRTFPTINIEPDIKR 719
+P + +M K I W P+ D+ WNFEKFL+GP+G P R+ P ++ DI
Sbjct: 156 HPSE----IMGSIKHISWEPIMVRDIRWNFEKFLVGPDGIPVMRWFHRTPVSTVKTDILA 211
Query: 720 LLK 728
+K
Sbjct: 212 YMK 214
>ref|NP_001156614.1| glutathione peroxidase 6 [Bos taurus].
Length = 221
Score = 150 bits (379), Expect = 2e-36
Identities = 83/201 (41%), Positives = 115/201 (57%), Gaps = 2/201 (0%)
Frame = +3
Query: 132 LTPLCHSLCTSTMAYIAKSFYDLSAISLDGEK-VDFNTFRGRAVLIENVASL*GTTTRDF 308
LTP + + + Y+ A++L+GE+ + F + G+ VL NVA+ G T + +
Sbjct: 21 LTPKQQQMKVDCYKGVTGTIYEYGALTLNGEEYIQFKQYVGKHVLFVNVATYUGLTAQ-Y 79
Query: 309 TQLNELQCRF-PRRLVVLGFPCNQFGHQENCQNEEILNSLKYVRPGGGFQPTFTLIQKCD 485
+LN LQ P +VVLGFPCNQFG QE +N EIL LKYVRPGGGF P F L +K D
Sbjct: 80 PELNALQEELKPFGVVVLGFPCNQFGKQEPAKNSEILMGLKYVRPGGGFVPNFQLFEKGD 139
Query: 486 VNGQNEHPVFAYLKDKLPYPYDDPFSLMTDPKFIIWSPVRRSDVSWNFEKFLIGPEGEPF 665
VNG+ E VF +LK+ P D L+ + W P++ D+ WNFEKFL+GP+G P
Sbjct: 140 VNGEKEQKVFTFLKNACPPTSD----LLGSSSQLFWEPMKVHDIRWNFEKFLVGPDGVPV 195
Query: 666 RRYSRTFPTINIEPDIKRLLK 728
R+ ++ D+ LK
Sbjct: 196 MRWYHRASVSTVKSDMLEYLK 216
>ref|NP_776502.1| glutathione peroxidase 3 precursor [Bos taurus].
Length = 226
Score = 149 bits (377), Expect = 3e-36
Identities = 79/187 (42%), Positives = 112/187 (59%), Gaps = 2/187 (1%)
Frame = +3
Query: 159 TSTMAYIAKSFYDLSAISLDGEK-VDFNTFRGRAVLIENVASL*GTTTRDFTQLNELQCR 335
T A + + Y+ A+++DGE+ + F + G+ +L NVAS G T + + +LN LQ
Sbjct: 30 TDCHAGVGGTIYEYGALTIDGEEYIPFKQYAGKYILFVNVASYUGLTGQ-YVELNALQEE 88
Query: 336 F-PRRLVVLGFPCNQFGHQENCQNEEILNSLKYVRPGGGFQPTFTLIQKCDVNGQNEHPV 512
P LV+LGFPCNQFG QE +N EIL +LKYVRPGGGF P F L +K DVNG+ E
Sbjct: 89 LEPFGLVILGFPCNQFGKQEPGENSEILATLKYVRPGGGFTPNFQLFEKGDVNGEKEQKF 148
Query: 513 FAYLKDKLPYPYDDPFSLMTDPKFIIWSPVRRSDVSWNFEKFLIGPEGEPFRRYSRTFPT 692
+ +LK+ P L+ P + W P++ D+ WNFEKFL+GP+G P R+
Sbjct: 149 YTFLKNSCP----PTSELLGSPDRLFWEPMKVHDIRWNFEKFLVGPDGIPIMRWYHRTTV 204
Query: 693 INIEPDI 713
+++ DI
Sbjct: 205 NSVKMDI 211
>ref|NP_777195.1| phospholipid hydroperoxide glutathione peroxidase, mitochondrial
precursor [Bos taurus].
Length = 197
Score = 90.1 bits (222), Expect = 3e-18
Identities = 62/193 (32%), Positives = 91/193 (47%), Gaps = 2/193 (1%)
Frame = +3
Query: 141 LCHSLCTSTMAY-IAKSFYDLSAISLDGEKVDFNTFRGRAVLIENVASL*GTTTRDFTQL 317
L ++C S + A+S ++ SA +DG V+ + +RG ++ NVAS G T ++TQL
Sbjct: 24 LASTMCASRDDWRCARSMHEFSAKDIDGRMVNLDKYRGHVCIVTNVASQUGKTDVNYTQL 83
Query: 318 NELQCRFPR-RLVVLGFPCNQFGHQENCQNEEILNSLKYVRPGGGFQPTFTLIQKCDVNG 494
+L R+ L +L FPCNQFG QE N EI G+ F L K VNG
Sbjct: 84 VDLHARYAECGLRILAFPCNQFGRQEPGSNAEIKEF------AAGYNVKFDLFSKICVNG 137
Query: 495 QNEHPVFAYLKDKLPYPYDDPFSLMTDPKFIIWSPVRRSDVSWNFEKFLIGPEGEPFRRY 674
+ HP++ ++K PK + + + WNF KFLI G +RY
Sbjct: 138 DDAHPLWKWMK--------------VQPK---GRGMLGNAIKWNFTKFLIDKNGCVVKRY 180
Query: 675 SRTFPTINIEPDI 713
+ IE D+
Sbjct: 181 GPMEEPLVIEKDL 193
>ref|NP_001094583.1| glutathione peroxidase 7 precursor [Bos taurus].
Length = 186
Score = 85.5 bits (210), Expect = 8e-17
Identities = 57/196 (29%), Positives = 84/196 (42%), Gaps = 1/196 (0%)
Frame = +3
Query: 153 LCTSTMAYIAKSFYDLSAISLDGEKVDFNTFRGRAVLIENVASL*GTTTRDFTQLNELQC 332
L + A + FYD A+++ G+ V +RG L+ NVAS G T + + L +LQ
Sbjct: 12 LAAAACAPREQDFYDFKAVNIRGKLVSLEKYRGSVSLVVNVASECGFTDQHYRALQQLQR 71
Query: 333 RF-PRRLVVLGFPCNQFGHQENCQNEEILNSLKYVRPGGGFQPTFTLIQKCDVNGQNEHP 509
P VL FPCNQFG QE N+EI + + + +F + K V G HP
Sbjct: 72 DLGPHHFNVLAFPCNQFGQQEPDSNKEIESFARRT-----YSVSFPMFSKIAVTGTGAHP 126
Query: 510 VFAYLKDKLPYPYDDPFSLMTDPKFIIWSPVRRSDVSWNFEKFLIGPEGEPFRRYSRTFP 689
F YL + + +WNF K+L+ P+G+ + T
Sbjct: 127 AFKYLTE-----------------------TSGKEPTWNFWKYLVAPDGKVIGAWDPTVS 163
Query: 690 TINIEPDIKRLLKVAI 737
I P I L++ I
Sbjct: 164 VEEIRPQITALVRKLI 179
>ref|NP_001039553.1| probable glutathione peroxidase 8 [Bos taurus].
Length = 209
Score = 79.7 bits (195), Expect = 4e-15
Identities = 53/185 (28%), Positives = 78/185 (42%), Gaps = 1/185 (0%)
Frame = +3
Query: 186 SFYDLSAISLDGEKVDFNTFRGRAVLIENVASL*GTTTRDFTQLNELQCRF-PRRLVVLG 362
SFY +G V F+G+ L+ NVAS T R++ L EL F P VL
Sbjct: 46 SFYTFEVKDANGRVVSLEKFKGKVALVVNVASDCQLTDRNYLALQELHKEFGPFHFSVLA 105
Query: 363 FPCNQFGHQENCQNEEILNSLKYVRPGGGFQPTFTLIQKCDVNGQNEHPVFAYLKDKLPY 542
FPCNQFG E ++E+++ + F TF + K + G P F +L D
Sbjct: 106 FPCNQFGESEPRPSKEVVSFAR-----NNFGVTFPIFHKIKILGSEAEPAFRFLVDS--- 157
Query: 543 PYDDPFSLMTDPKFIIWSPVRRSDVSWNFEKFLIGPEGEPFRRYSRTFPTINIEPDIKRL 722
+ + WNF K+L+ PEG+ + + P I P+I L
Sbjct: 158 --------------------SKKEPRWNFWKYLVNPEGQVVKTWRPEEPIEVIRPEIAAL 197
Query: 723 LKVAI 737
++ I
Sbjct: 198 IRQMI 202
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 47,127,958
Number of extensions: 1391499
Number of successful extensions: 4214
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 4197
Number of HSP's successfully gapped: 8
Length of query: 370
Length of database: 17,681,374
Length adjustment: 104
Effective length of query: 266
Effective length of database: 14,240,222
Effective search space: 3787899052
Effective search space used: 3787899052
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-003361
(1110 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001108607.1| glutathione peroxidase 2 [Canis lupus famili... 387 e-108
Alignment gi|NP_001108591.1| glutathione peroxidase 1 [Canis lupus famili... 260 2e-69
Alignment gi|NP_001157926.1| glutathione peroxidase 3 [Canis lupus famili... 147 2e-35
Alignment gi|NP_001003213.1| epididymal secretory glutathione peroxidase ... 145 9e-35
Alignment gi|XP_545450.2| PREDICTED: similar to glutathione peroxidase 6 ... 129 5e-30
Alignment gi|XP_855017.1| PREDICTED: similar to Plasma glutathione peroxi... 126 3e-29
Alignment gi|XP_535237.1| PREDICTED: similar to F26E4.12 isoform 1 [Canis... 78 2e-14
Alignment gi|XP_848225.1| PREDICTED: similar to F26E4.12 [Canis familiari... 70 3e-12
Alignment gi|XP_532572.2| PREDICTED: similar to glutathione peroxidase 7 ... 66 7e-11
Alignment gi|XP_859275.1| PREDICTED: similar to F26E4.12 isoform 2 [Canis... 66 7e-11
>ref|NP_001108607.1| glutathione peroxidase 2 [Canis lupus familiaris].
Length = 190
Score = 387 bits (995), Expect = e-108
Identities = 185/190 (97%), Positives = 188/190 (98%)
Frame = +3
Query: 168 MAYIAKSFYDLSAISLDGEKVDFNTFRGRAVLIENVASL*GTTTRDFTQLNELQCRFPRR 347
MAYIAKSFYDLSAISLDGEKVDFNTFRGRAVLIENVASL GTTTRDFTQLNELQCRFPRR
Sbjct: 1 MAYIAKSFYDLSAISLDGEKVDFNTFRGRAVLIENVASLUGTTTRDFTQLNELQCRFPRR 60
Query: 348 LVVLGFPCNQFGHQENCQNEEILNSLKYVRPGGGFQPTFTLIQKCDVNGQNEHPVFAYLK 527
LVVLGFPCNQFGHQENCQNEEILNSLKYVRPGGGFQPTFTL+QKC+VNGQNEHPVFAYLK
Sbjct: 61 LVVLGFPCNQFGHQENCQNEEILNSLKYVRPGGGFQPTFTLVQKCEVNGQNEHPVFAYLK 120
Query: 528 DKLPYPYDDPFSLMTDPKFIIWSPVRRSDVSWNFEKFLIGPEGEPFRRYSRTFPTINIEP 707
DKLPYPYDDP SLMTDPKFIIWSPVRRSDV+WNFEKFLIGPEGEPFRRYSRTFPTINIEP
Sbjct: 121 DKLPYPYDDPLSLMTDPKFIIWSPVRRSDVAWNFEKFLIGPEGEPFRRYSRTFPTINIEP 180
Query: 708 DIKRLLKVAI 737
DIKRLLKVAI
Sbjct: 181 DIKRLLKVAI 190
>ref|NP_001108591.1| glutathione peroxidase 1 [Canis lupus familiaris].
Length = 205
Score = 260 bits (664), Expect = 2e-69
Identities = 127/194 (65%), Positives = 152/194 (78%), Gaps = 2/194 (1%)
Frame = +3
Query: 150 SLCTSTMAYIAKSFYDLSAISL-DGEKVDFNTFRGRAVLIENVASL*GTTTRDFTQLNEL 326
+L + +A +S Y SA L GE + + RG+ +LIENVASL GTT RD+TQ+NEL
Sbjct: 5 ALAAAAVAAAPRSVYAFSARPLAGGEPMSLGSLRGKVLLIENVASLUGTTVRDYTQMNEL 64
Query: 327 QCRF-PRRLVVLGFPCNQFGHQENCQNEEILNSLKYVRPGGGFQPTFTLIQKCDVNGQNE 503
Q R PR LVVLGFPCNQFGHQEN +NEEILNSLKYVRPGGGF+P FTL +KC+VNG
Sbjct: 65 QRRLGPRGLVVLGFPCNQFGHQENAKNEEILNSLKYVRPGGGFEPNFTLFEKCEVNGAQA 124
Query: 504 HPVFAYLKDKLPYPYDDPFSLMTDPKFIIWSPVRRSDVSWNFEKFLIGPEGEPFRRYSRT 683
HP+FA+L++ LP P DD +LMTDPKFI WSPV R+DV+WNFEKFL+GP+G P RRYSR
Sbjct: 125 HPLFAFLRESLPAPSDDTTALMTDPKFITWSPVCRNDVAWNFEKFLVGPDGVPVRRYSRR 184
Query: 684 FPTINIEPDIKRLL 725
FPTI+IEPDI+ LL
Sbjct: 185 FPTIDIEPDIEALL 198
>ref|NP_001157926.1| glutathione peroxidase 3 [Canis lupus familiaris].
Length = 226
Score = 147 bits (370), Expect = 2e-35
Identities = 77/181 (42%), Positives = 110/181 (60%), Gaps = 2/181 (1%)
Frame = +3
Query: 177 IAKSFYDLSAISLDGEK-VDFNTFRGRAVLIENVASL*GTTTRDFTQLNELQCRF-PRRL 350
++ + Y+ A++++GE+ + F + G+ +L NVAS G T + + +LN LQ P L
Sbjct: 36 VSGTIYEYGALTINGEEYIPFKQYAGKYILFVNVASYUGLTGQ-YLELNALQEELAPFGL 94
Query: 351 VVLGFPCNQFGHQENCQNEEILNSLKYVRPGGGFQPTFTLIQKCDVNGQNEHPVFAYLKD 530
V+LGFPCNQFG QE +N EIL SLKYVRPGGGF P F L +K DVNG+ E + +LK+
Sbjct: 95 VILGFPCNQFGKQEPGENSEILPSLKYVRPGGGFVPNFQLFEKGDVNGEKEQKFYTFLKN 154
Query: 531 KLPYPYDDPFSLMTDPKFIIWSPVRRSDVSWNFEKFLIGPEGEPFRRYSRTFPTINIEPD 710
P L+ P + W P++ D+ WNFEKFL+GP+G P R+ ++ D
Sbjct: 155 SCP----PTSELLGSPGRLFWEPMKVHDIRWNFEKFLVGPDGIPIMRWYHRTTVSTVKMD 210
Query: 711 I 713
I
Sbjct: 211 I 211
>ref|NP_001003213.1| epididymal secretory glutathione peroxidase precursor [Canis lupus
familiaris].
Length = 221
Score = 145 bits (365), Expect = 9e-35
Identities = 80/183 (43%), Positives = 110/183 (60%), Gaps = 2/183 (1%)
Frame = +3
Query: 186 SFYDLSAISLDG-EKVDFNTFRGRAVLIENVASL*GTTTRDFTQLNELQCRF-PRRLVVL 359
+ Y+ A++L+G E++ F + + VL NVA+ G T + + +LN LQ P LVVL
Sbjct: 39 TIYEYEALTLNGNERIQFKQYPRKHVLFVNVATYCGLTAQ-YPELNSLQEELKPLGLVVL 97
Query: 360 GFPCNQFGHQENCQNEEILNSLKYVRPGGGFQPTFTLIQKCDVNGQNEHPVFAYLKDKLP 539
GFPCNQFG Q +N EIL LKYVRPG G+ P F L +K DVNG+ E VF +LK P
Sbjct: 98 GFPCNQFGKQGPGENSEILPGLKYVRPGRGYVPNFQLFEKGDVNGEKEQKVFTFLKLSCP 157
Query: 540 YPYDDPFSLMTDPKFIIWSPVRRSDVSWNFEKFLIGPEGEPFRRYSRTFPTINIEPDIKR 719
+P + ++ + I W PV+ D+ WNFEKFL+GP+G P R+ P ++ DI
Sbjct: 158 HPSE----VLGSFRHISWDPVKVHDIRWNFEKFLVGPDGVPVLRWFHRTPISTVKEDILV 213
Query: 720 LLK 728
LK
Sbjct: 214 YLK 216
>ref|XP_545450.2| PREDICTED: similar to glutathione peroxidase 6 [Canis familiaris].
Length = 154
Score = 129 bits (324), Expect = 5e-30
Identities = 67/144 (46%), Positives = 86/144 (59%)
Frame = +3
Query: 297 TRDFTQLNELQCRFPRRLVVLGFPCNQFGHQENCQNEEILNSLKYVRPGGGFQPTFTLIQ 476
TR+ L E F +VVLGFPCNQFG QE +N EIL+ LK+VRPGGGF P F L +
Sbjct: 12 TRELNALQEELKSFG--VVVLGFPCNQFGKQEPGKNSEILSGLKHVRPGGGFVPNFQLFE 69
Query: 477 KCDVNGQNEHPVFAYLKDKLPYPYDDPFSLMTDPKFIIWSPVRRSDVSWNFEKFLIGPEG 656
K DVNG+ E VF +LK+ P D L+ + W P++ D+ WNFEKFL+GP+G
Sbjct: 70 KGDVNGEKEQKVFTFLKNSCPPTSD----LLGSSNQLFWEPMKVHDIRWNFEKFLVGPDG 125
Query: 657 EPFRRYSRTFPTINIEPDIKRLLK 728
P R+ P ++ DI LK
Sbjct: 126 VPVMRWFHQAPVSTVKADILAYLK 149
>ref|XP_855017.1| PREDICTED: similar to Plasma glutathione peroxidase precursor
(GSHPx-P) [Canis familiaris].
Length = 147
Score = 126 bits (317), Expect = 3e-29
Identities = 64/135 (47%), Positives = 82/135 (60%), Gaps = 1/135 (0%)
Frame = +3
Query: 312 QLNELQCRF-PRRLVVLGFPCNQFGHQENCQNEEILNSLKYVRPGGGFQPTFTLIQKCDV 488
+LN LQ P LV+LGFPCNQFG QE +N EIL SLKYVRPGGGF P F L +K DV
Sbjct: 2 ELNALQEELAPFGLVILGFPCNQFGKQEPGENSEILPSLKYVRPGGGFVPNFQLFEKGDV 61
Query: 489 NGQNEHPVFAYLKDKLPYPYDDPFSLMTDPKFIIWSPVRRSDVSWNFEKFLIGPEGEPFR 668
NG+ E + +LK+ P L+ P + W P++ D+ WNFEKFL+GP+G P
Sbjct: 62 NGEKEQKFYTFLKNSCP----PTSELLGSPGRLFWEPMKVHDIRWNFEKFLVGPDGIPIM 117
Query: 669 RYSRTFPTINIEPDI 713
R+ ++ DI
Sbjct: 118 RWYHRTTVSTVKMDI 132
>ref|XP_535237.1| PREDICTED: similar to F26E4.12 isoform 1 [Canis familiaris].
Length = 209
Score = 77.8 bits (190), Expect = 2e-14
Identities = 52/185 (28%), Positives = 77/185 (41%), Gaps = 1/185 (0%)
Frame = +3
Query: 186 SFYDLSAISLDGEKVDFNTFRGRAVLIENVASL*GTTTRDFTQLNELQCRF-PRRLVVLG 362
SFY G V F+G+ L+ NVAS T R++ L EL F P VL
Sbjct: 46 SFYTFEVKDAKGRTVSLEKFKGKVTLVVNVASDCQLTDRNYLALQELHKEFGPFHFSVLA 105
Query: 363 FPCNQFGHQENCQNEEILNSLKYVRPGGGFQPTFTLIQKCDVNGQNEHPVFAYLKDKLPY 542
FPCNQFG E ++E+++ + + TF + K + G P F +L D
Sbjct: 106 FPCNQFGESEPRPSKEVVSFAR-----NNYGATFPIFHKIKILGSEADPAFRFLVDS--- 157
Query: 543 PYDDPFSLMTDPKFIIWSPVRRSDVSWNFEKFLIGPEGEPFRRYSRTFPTINIEPDIKRL 722
+ + WNF K+L+ PEG+ + + P I P+I L
Sbjct: 158 --------------------SKKEPRWNFWKYLVNPEGQVVKSWRPEEPIEVIRPEIAAL 197
Query: 723 LKVAI 737
++ I
Sbjct: 198 VRQMI 202
>ref|XP_848225.1| PREDICTED: similar to F26E4.12 [Canis familiaris].
Length = 209
Score = 70.5 bits (171), Expect = 3e-12
Identities = 48/181 (26%), Positives = 73/181 (40%), Gaps = 1/181 (0%)
Frame = +3
Query: 186 SFYDLSAISLDGEKVDFNTFRGRAVLIENVASL*GTTTRDFTQLNELQCRF-PRRLVVLG 362
SFY G V F+G+ L+ NVAS R++ + EL F P VL
Sbjct: 46 SFYTFEVKDAKGRTVSLEKFKGKVTLVVNVASDCQLRDRNYLAVQELHKEFGPFHFSVLA 105
Query: 363 FPCNQFGHQENCQNEEILNSLKYVRPGGGFQPTFTLIQKCDVNGQNEHPVFAYLKDKLPY 542
FPCNQFG E ++E+++ + + TF + K + G P F +L D
Sbjct: 106 FPCNQFGESEPFPSKEVVSFAR-----NNYGATFPIFHKIKILGSEADPAFRFLVDS--- 157
Query: 543 PYDDPFSLMTDPKFIIWSPVRRSDVSWNFEKFLIGPEGEPFRRYSRTFPTINIEPDIKRL 722
+ + WNF K+L+ PE + + + P I P+I L
Sbjct: 158 --------------------SKKEPRWNFWKYLVNPEEQVVKSWRPEEPIEVIRPEIAAL 197
Query: 723 L 725
+
Sbjct: 198 V 198
>ref|XP_532572.2| PREDICTED: similar to glutathione peroxidase 7 [Canis familiaris].
Length = 222
Score = 65.9 bits (159), Expect = 7e-11
Identities = 47/160 (29%), Positives = 67/160 (41%), Gaps = 1/160 (0%)
Frame = +3
Query: 261 LIENVASL*GTTTRDFTQLNELQCRF-PRRLVVLGFPCNQFGHQENCQNEEILNSLKYVR 437
L+ NVAS G T + L +LQ PR VL FPCNQFG QE + EI + +
Sbjct: 84 LVVNVASACGFTDGHYRSLQQLQRDLGPRHFTVLAFPCNQFGQQEPDGDREIESFARRT- 142
Query: 438 PGGGFQPTFTLIQKCDVNGQNEHPVFAYLKDKLPYPYDDPFSLMTDPKFIIWSPVRRSDV 617
+ +F + K V G HP F YL + +
Sbjct: 143 ----YGVSFPMFSKVAVTGTGAHPAFKYL-----------------------TQTSGKEP 175
Query: 618 SWNFEKFLIGPEGEPFRRYSRTFPTINIEPDIKRLLKVAI 737
+WNF K+L+ P+G+ + T +I P I L++ I
Sbjct: 176 TWNFWKYLVAPDGKVVGAWDPTVSVEDIRPQITALVRKLI 215
>ref|XP_859275.1| PREDICTED: similar to F26E4.12 isoform 2 [Canis familiaris].
Length = 158
Score = 65.9 bits (159), Expect = 7e-11
Identities = 45/165 (27%), Positives = 70/165 (42%), Gaps = 1/165 (0%)
Frame = +3
Query: 246 RGRAVLIENVASL*GTTTRDFTQLNELQCRF-PRRLVVLGFPCNQFGHQENCQNEEILNS 422
+ + L+ NVAS T R++ L EL F P VL FPCNQFG E ++E+++
Sbjct: 15 KAKVTLVVNVASDCQLTDRNYLALQELHKEFGPFHFSVLAFPCNQFGESEPRPSKEVVSF 74
Query: 423 LKYVRPGGGFQPTFTLIQKCDVNGQNEHPVFAYLKDKLPYPYDDPFSLMTDPKFIIWSPV 602
+ + TF + K + G P F +L D
Sbjct: 75 AR-----NNYGATFPIFHKIKILGSEADPAFRFLVDS----------------------- 106
Query: 603 RRSDVSWNFEKFLIGPEGEPFRRYSRTFPTINIEPDIKRLLKVAI 737
+ + WNF K+L+ PEG+ + + P I P+I L++ I
Sbjct: 107 SKKEPRWNFWKYLVNPEGQVVKSWRPEEPIEVIRPEIAALVRQMI 151
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 49,056,932
Number of extensions: 1399992
Number of successful extensions: 4367
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 4354
Number of HSP's successfully gapped: 10
Length of query: 370
Length of database: 18,874,504
Length adjustment: 104
Effective length of query: 266
Effective length of database: 15,407,560
Effective search space: 4098410960
Effective search space used: 4098410960
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-003361
(1110 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_002074.2| glutathione peroxidase 2 [Homo sapiens]. 385 e-107
Alignment gi|NP_000572.2| glutathione peroxidase 1 isoform 1 [Homo sapien... 252 4e-67
Alignment gi|NP_001500.1| epididymal secretory glutathione peroxidase iso... 155 5e-38
Alignment gi|NP_002075.2| glutathione peroxidase 3 precursor [Homo sapien... 148 1e-35
Alignment gi|NP_874360.1| glutathione peroxidase 6 precursor [Homo sapien... 139 4e-33
Alignment gi|NP_002076.2| phospholipid hydroperoxide glutathione peroxida... 91 2e-18
Alignment gi|NP_001034937.1| phospholipid hydroperoxide glutathione perox... 91 2e-18
Alignment gi|NP_958799.1| glutathione peroxidase 1 isoform 2 [Homo sapien... 86 6e-17
Alignment gi|NP_056511.2| glutathione peroxidase 7 precursor [Homo sapien... 84 2e-16
Alignment gi|NP_001034936.1| phospholipid hydroperoxide glutathione perox... 81 2e-15
>ref|NP_002074.2| glutathione peroxidase 2 [Homo sapiens].
Length = 190
Score = 385 bits (988), Expect = e-107
Identities = 183/190 (96%), Positives = 188/190 (98%)
Frame = +3
Query: 168 MAYIAKSFYDLSAISLDGEKVDFNTFRGRAVLIENVASL*GTTTRDFTQLNELQCRFPRR 347
MA+IAKSFYDLSAISLDGEKVDFNTFRGRAVLIENVASL GTTTRDFTQLNELQCRFPRR
Sbjct: 1 MAFIAKSFYDLSAISLDGEKVDFNTFRGRAVLIENVASLUGTTTRDFTQLNELQCRFPRR 60
Query: 348 LVVLGFPCNQFGHQENCQNEEILNSLKYVRPGGGFQPTFTLIQKCDVNGQNEHPVFAYLK 527
LVVLGFPCNQFGHQENCQNEEILNSLKYVRPGGG+QPTFTL+QKC+VNGQNEHPVFAYLK
Sbjct: 61 LVVLGFPCNQFGHQENCQNEEILNSLKYVRPGGGYQPTFTLVQKCEVNGQNEHPVFAYLK 120
Query: 528 DKLPYPYDDPFSLMTDPKFIIWSPVRRSDVSWNFEKFLIGPEGEPFRRYSRTFPTINIEP 707
DKLPYPYDDPFSLMTDPK IIWSPVRRSDV+WNFEKFLIGPEGEPFRRYSRTFPTINIEP
Sbjct: 121 DKLPYPYDDPFSLMTDPKLIIWSPVRRSDVAWNFEKFLIGPEGEPFRRYSRTFPTINIEP 180
Query: 708 DIKRLLKVAI 737
DIKRLLKVAI
Sbjct: 181 DIKRLLKVAI 190
>ref|NP_000572.2| glutathione peroxidase 1 isoform 1 [Homo sapiens].
Length = 203
Score = 252 bits (644), Expect = 4e-67
Identities = 125/187 (66%), Positives = 146/187 (78%), Gaps = 2/187 (1%)
Frame = +3
Query: 171 AYIAKSFYDLSAISL-DGEKVDFNTFRGRAVLIENVASL*GTTTRDFTQLNELQCRF-PR 344
A A+S Y SA L GE V + RG+ +LIENVASL GTT RD+TQ+NELQ R PR
Sbjct: 10 AAAAQSVYAFSARPLAGGEPVSLGSLRGKVLLIENVASLUGTTVRDYTQMNELQRRLGPR 69
Query: 345 RLVVLGFPCNQFGHQENCQNEEILNSLKYVRPGGGFQPTFTLIQKCDVNGQNEHPVFAYL 524
LVVLGFPCNQFGHQEN +NEEILNSLKYVRPGGGF+P F L +KC+VNG HP+FA+L
Sbjct: 70 GLVVLGFPCNQFGHQENAKNEEILNSLKYVRPGGGFEPNFMLFEKCEVNGAGAHPLFAFL 129
Query: 525 KDKLPYPYDDPFSLMTDPKFIIWSPVRRSDVSWNFEKFLIGPEGEPFRRYSRTFPTINIE 704
++ LP P DD +LMTDPK I WSPV R+DV+WNFEKFL+GP+G P RRYSR F TI+IE
Sbjct: 130 REALPAPSDDATALMTDPKLITWSPVCRNDVAWNFEKFLVGPDGVPLRRYSRRFQTIDIE 189
Query: 705 PDIKRLL 725
PDI+ LL
Sbjct: 190 PDIEALL 196
>ref|NP_001500.1| epididymal secretory glutathione peroxidase isoform 1 precursor
[Homo sapiens].
Length = 221
Score = 155 bits (393), Expect = 5e-38
Identities = 86/183 (46%), Positives = 114/183 (62%), Gaps = 2/183 (1%)
Frame = +3
Query: 186 SFYDLSAISLD-GEKVDFNTFRGRAVLIENVASL*GTTTRDFTQLNELQCRF-PRRLVVL 359
+ YD AI+L+ E V F + G+ +L NVA+ G T + + +LN LQ P LVVL
Sbjct: 39 TIYDYEAIALNKNEYVSFKQYVGKHILFVNVATYCGLTAQ-YPELNALQEELKPYGLVVL 97
Query: 360 GFPCNQFGHQENCQNEEILNSLKYVRPGGGFQPTFTLIQKCDVNGQNEHPVFAYLKDKLP 539
GFPCNQFG QE N+EIL LKYVRPGGGF P+F L +K DVNG+ E VF++LK P
Sbjct: 98 GFPCNQFGKQEPGDNKEILPGLKYVRPGGGFVPSFQLFEKGDVNGEKEQKVFSFLKHSCP 157
Query: 540 YPYDDPFSLMTDPKFIIWSPVRRSDVSWNFEKFLIGPEGEPFRRYSRTFPTINIEPDIKR 719
+P + ++ K I W PV+ D+ WNFEKFL+GP+G P R+S +++ DI
Sbjct: 158 HPSE----ILGTFKSISWDPVKVHDIRWNFEKFLVGPDGIPVMRWSHRATVSSVKTDILA 213
Query: 720 LLK 728
LK
Sbjct: 214 YLK 216
>ref|NP_002075.2| glutathione peroxidase 3 precursor [Homo sapiens].
Length = 226
Score = 148 bits (373), Expect = 1e-35
Identities = 79/181 (43%), Positives = 110/181 (60%), Gaps = 2/181 (1%)
Frame = +3
Query: 177 IAKSFYDLSAISLDGEK-VDFNTFRGRAVLIENVASL*GTTTRDFTQLNELQCRF-PRRL 350
I+ + Y+ A+++DGE+ + F + G+ VL NVAS G T + + +LN LQ P L
Sbjct: 36 ISGTIYEYGALTIDGEEYIPFKQYAGKYVLFVNVASYUGLTGQ-YIELNALQEELAPFGL 94
Query: 351 VVLGFPCNQFGHQENCQNEEILNSLKYVRPGGGFQPTFTLIQKCDVNGQNEHPVFAYLKD 530
V+LGFPCNQFG QE +N EIL +LKYVRPGGGF P F L +K DVNG+ E + +LK+
Sbjct: 95 VILGFPCNQFGKQEPGENSEILPTLKYVRPGGGFVPNFQLFEKGDVNGEKEQKFYTFLKN 154
Query: 531 KLPYPYDDPFSLMTDPKFIIWSPVRRSDVSWNFEKFLIGPEGEPFRRYSRTFPTINIEPD 710
P L+ + W P++ D+ WNFEKFL+GP+G P R+ N++ D
Sbjct: 155 SCP----PTSELLGTSDRLFWEPMKVHDIRWNFEKFLVGPDGIPIMRWHHRTTVSNVKMD 210
Query: 711 I 713
I
Sbjct: 211 I 211
>ref|NP_874360.1| glutathione peroxidase 6 precursor [Homo sapiens].
Length = 221
Score = 139 bits (351), Expect = 4e-33
Identities = 76/186 (40%), Positives = 106/186 (56%), Gaps = 2/186 (1%)
Frame = +3
Query: 177 IAKSFYDLSAISLDGEK-VDFNTFRGRAVLIENVASL*GTTTRDFTQLNELQCRFPR-RL 350
+ + Y+ A++L+GE+ + F F G+ VL NVA+ G + + +LN LQ +
Sbjct: 36 VTGTIYEYGALTLNGEEYIQFKQFAGKHVLFVNVAAYUGLAAQ-YPELNALQEELKNFGV 94
Query: 351 VVLGFPCNQFGHQENCQNEEILNSLKYVRPGGGFQPTFTLIQKCDVNGQNEHPVFAYLKD 530
+VL FPCNQFG QE N EIL LKYV PG GF P+F L +K DVNG+ E VF +LK+
Sbjct: 95 IVLAFPCNQFGKQEPGTNSEILLGLKYVCPGSGFVPSFQLFEKGDVNGEKEQKVFTFLKN 154
Query: 531 KLPYPYDDPFSLMTDPKFIIWSPVRRSDVSWNFEKFLIGPEGEPFRRYSRTFPTINIEPD 710
P D L+ + W P++ D+ WNFEKFL+GP+G P + P ++ D
Sbjct: 155 SCPPTSD----LLGSSSQLFWEPMKVHDIRWNFEKFLVGPDGVPVMHWFHQAPVSTVKSD 210
Query: 711 IKRLLK 728
I LK
Sbjct: 211 ILEYLK 216
>ref|NP_002076.2| phospholipid hydroperoxide glutathione peroxidase, mitochondrial
isoform A precursor [Homo sapiens].
Length = 197
Score = 90.9 bits (224), Expect = 2e-18
Identities = 62/193 (32%), Positives = 94/193 (48%), Gaps = 2/193 (1%)
Frame = +3
Query: 141 LCHSLCTSTMAY-IAKSFYDLSAISLDGEKVDFNTFRGRAVLIENVASL*GTTTRDFTQL 317
L ++C S + A+S ++ SA +DG V+ + +RG ++ NVAS G T ++TQL
Sbjct: 24 LAGTMCASRDDWRCARSMHEFSAKDIDGHMVNLDKYRGFVCIVTNVASQUGKTEVNYTQL 83
Query: 318 NELQCRFPR-RLVVLGFPCNQFGHQENCQNEEILNSLKYVRPGGGFQPTFTLIQKCDVNG 494
+L R+ L +L FPCNQFG QE NEEI G+ F + K VNG
Sbjct: 84 VDLHARYAECGLRILAFPCNQFGKQEPGSNEEIKEF------AAGYNVKFDMFSKICVNG 137
Query: 495 QNEHPVFAYLKDKLPYPYDDPFSLMTDPKFIIWSPVRRSDVSWNFEKFLIGPEGEPFRRY 674
+ HP++ ++K + K I+ + ++ WNF KFLI G +RY
Sbjct: 138 DDAHPLWKWMK------------IQPKGKGILGNAIK-----WNFTKFLIDKNGCVVKRY 180
Query: 675 SRTFPTINIEPDI 713
+ IE D+
Sbjct: 181 GPMEEPLVIEKDL 193
>ref|NP_001034937.1| phospholipid hydroperoxide glutathione peroxidase, mitochondrial
isoform C precursor [Homo sapiens].
Length = 234
Score = 90.5 bits (223), Expect = 2e-18
Identities = 59/179 (32%), Positives = 88/179 (49%), Gaps = 1/179 (0%)
Frame = +3
Query: 180 AKSFYDLSAISLDGEKVDFNTFRGRAVLIENVASL*GTTTRDFTQLNELQCRFPR-RLVV 356
A+S ++ SA +DG V+ + +RG ++ NVAS G T ++TQL +L R+ L +
Sbjct: 75 ARSMHEFSAKDIDGHMVNLDKYRGFVCIVTNVASQUGKTEVNYTQLVDLHARYAECGLRI 134
Query: 357 LGFPCNQFGHQENCQNEEILNSLKYVRPGGGFQPTFTLIQKCDVNGQNEHPVFAYLKDKL 536
L FPCNQFG QE NEEI G+ F + K VNG + HP++ ++K
Sbjct: 135 LAFPCNQFGKQEPGSNEEIKEF------AAGYNVKFDMFSKICVNGDDAHPLWKWMK--- 185
Query: 537 PYPYDDPFSLMTDPKFIIWSPVRRSDVSWNFEKFLIGPEGEPFRRYSRTFPTINIEPDI 713
+ K I+ + ++ WNF KFLI G +RY + IE D+
Sbjct: 186 ---------IQPKGKGILGNAIK-----WNFTKFLIDKNGCVVKRYGPMEEPLVIEKDL 230
>ref|NP_958799.1| glutathione peroxidase 1 isoform 2 [Homo sapiens].
Length = 98
Score = 85.9 bits (211), Expect = 6e-17
Identities = 48/75 (64%), Positives = 54/75 (72%), Gaps = 2/75 (2%)
Frame = +3
Query: 171 AYIAKSFYDLSAISL-DGEKVDFNTFRGRAVLIENVASL*GTTTRDFTQLNELQCRF-PR 344
A A+S Y SA L GE V + RG+ +LIENVASL GTT RD+TQ+NELQ R PR
Sbjct: 10 AAAAQSVYAFSARPLAGGEPVSLGSLRGKVLLIENVASLUGTTVRDYTQMNELQRRLGPR 69
Query: 345 RLVVLGFPCNQFGHQ 389
LVVLGFPCNQFGHQ
Sbjct: 70 GLVVLGFPCNQFGHQ 84
>ref|NP_056511.2| glutathione peroxidase 7 precursor [Homo sapiens].
Length = 187
Score = 84.3 bits (207), Expect = 2e-16
Identities = 56/196 (28%), Positives = 84/196 (42%), Gaps = 1/196 (0%)
Frame = +3
Query: 153 LCTSTMAYIAKSFYDLSAISLDGEKVDFNTFRGRAVLIENVASL*GTTTRDFTQLNELQC 332
L + A + FYD A+++ G+ V +RG L+ NVAS G T + + L +LQ
Sbjct: 13 LWAAACAQQEQDFYDFKAVNIRGKLVSLEKYRGSVSLVVNVASECGFTDQHYRALQQLQR 72
Query: 333 RF-PRRLVVLGFPCNQFGHQENCQNEEILNSLKYVRPGGGFQPTFTLIQKCDVNGQNEHP 509
P VL FPCNQFG QE N+EI + + + +F + K V G HP
Sbjct: 73 DLGPHHFNVLAFPCNQFGQQEPDSNKEIESFARRT-----YSVSFPMFSKIAVTGTGAHP 127
Query: 510 VFAYLKDKLPYPYDDPFSLMTDPKFIIWSPVRRSDVSWNFEKFLIGPEGEPFRRYSRTFP 689
F YL + + +WNF K+L+ P+G+ + T
Sbjct: 128 AFKYL-----------------------AQTSGKEPTWNFWKYLVAPDGKVVGAWDPTVS 164
Query: 690 TINIEPDIKRLLKVAI 737
+ P I L++ I
Sbjct: 165 VEEVRPQITALVRKLI 180
>ref|NP_001034936.1| phospholipid hydroperoxide glutathione peroxidase, mitochondrial
isoform B precursor [Homo sapiens].
Length = 227
Score = 80.9 bits (198), Expect = 2e-15
Identities = 54/168 (32%), Positives = 83/168 (49%), Gaps = 2/168 (1%)
Frame = +3
Query: 141 LCHSLCTSTMAY-IAKSFYDLSAISLDGEKVDFNTFRGRAVLIENVASL*GTTTRDFTQL 317
L ++C S + A+S ++ SA +DG V+ + +RG ++ NVAS G T ++TQL
Sbjct: 24 LAGTMCASRDDWRCARSMHEFSAKDIDGHMVNLDKYRGFVCIVTNVASQUGKTEVNYTQL 83
Query: 318 NELQCRFPR-RLVVLGFPCNQFGHQENCQNEEILNSLKYVRPGGGFQPTFTLIQKCDVNG 494
+L R+ L +L FPCNQFG QE NEEI G+ F + K VNG
Sbjct: 84 VDLHARYAECGLRILAFPCNQFGKQEPGSNEEIKEF------AAGYNVKFDMFSKICVNG 137
Query: 495 QNEHPVFAYLKDKLPYPYDDPFSLMTDPKFIIWSPVRRSDVSWNFEKF 638
+ HP++ ++K + K I+ + ++ WNF KF
Sbjct: 138 DDAHPLWKWMK------------IQPKGKGILGNAIK-----WNFTKF 168
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 48,074,899
Number of extensions: 1371941
Number of successful extensions: 4302
Number of sequences better than 1.0e-05: 11
Number of HSP's gapped: 4283
Number of HSP's successfully gapped: 11
Length of query: 370
Length of database: 18,297,164
Length adjustment: 104
Effective length of query: 266
Effective length of database: 14,868,908
Effective search space: 3955129528
Effective search space used: 3955129528
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-003361
(1110 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_109602.2| glutathione peroxidase 2 [Mus musculus]. 376 e-104
Alignment gi|NP_032186.2| glutathione peroxidase 1 [Mus musculus]. 254 8e-68
Alignment gi|NP_663426.2| glutathione peroxidase 6 precursor [Mus musculu... 150 2e-36
Alignment gi|NP_034473.2| epididymal secretory glutathione peroxidase pre... 149 3e-36
Alignment gi|NP_001077398.1| glutathione peroxidase 3 isoform 1 [Mus musc... 146 2e-35
Alignment gi|NP_032187.2| glutathione peroxidase 3 isoform 2 [Mus musculu... 146 2e-35
Alignment gi|NP_077160.1| glutathione peroxidase 7 precursor [Mus musculu... 88 1e-17
Alignment gi|NP_032188.3| phospholipid hydroperoxide glutathione peroxida... 85 9e-17
Alignment gi|NP_001032830.2| phospholipid hydroperoxide glutathione perox... 85 1e-16
Alignment gi|NP_081403.1| probable glutathione peroxidase 8 [Mus musculus]. 72 6e-13
>ref|NP_109602.2| glutathione peroxidase 2 [Mus musculus].
Length = 190
Score = 376 bits (965), Expect = e-104
Identities = 178/190 (93%), Positives = 184/190 (96%)
Frame = +3
Query: 168 MAYIAKSFYDLSAISLDGEKVDFNTFRGRAVLIENVASL*GTTTRDFTQLNELQCRFPRR 347
MAYIAKSFYDLSA+ LDGEK+DFNTFRGRAVLIENVASL GTTTRD+ QLNELQCRFPRR
Sbjct: 1 MAYIAKSFYDLSAVGLDGEKIDFNTFRGRAVLIENVASLUGTTTRDYNQLNELQCRFPRR 60
Query: 348 LVVLGFPCNQFGHQENCQNEEILNSLKYVRPGGGFQPTFTLIQKCDVNGQNEHPVFAYLK 527
LVVLGFPCNQFGHQENCQNEEILNSLKYVRPGGG+QPTF+L QKCDVNGQNEHPVFAYLK
Sbjct: 61 LVVLGFPCNQFGHQENCQNEEILNSLKYVRPGGGYQPTFSLTQKCDVNGQNEHPVFAYLK 120
Query: 528 DKLPYPYDDPFSLMTDPKFIIWSPVRRSDVSWNFEKFLIGPEGEPFRRYSRTFPTINIEP 707
DKLPYPYDDPFSLMTDPK IIWSPVRRSDVSWNFEKFLIGPEGEPFRRYSR+F TINIEP
Sbjct: 121 DKLPYPYDDPFSLMTDPKLIIWSPVRRSDVSWNFEKFLIGPEGEPFRRYSRSFQTINIEP 180
Query: 708 DIKRLLKVAI 737
DIKRLLKVAI
Sbjct: 181 DIKRLLKVAI 190
>ref|NP_032186.2| glutathione peroxidase 1 [Mus musculus].
Length = 201
Score = 254 bits (649), Expect = 8e-68
Identities = 124/194 (63%), Positives = 154/194 (79%), Gaps = 3/194 (1%)
Frame = +3
Query: 153 LCTSTMAYIAKS-FYDLSAISLDG-EKVDFNTFRGRAVLIENVASL*GTTTRDFTQLNEL 326
+C + ++ A+S Y SA L G E V + RG+ +LIENVASL GTT RD+T++N+L
Sbjct: 1 MCAARLSAAAQSTVYAFSARPLTGGEPVSLGSLRGKVLLIENVASLUGTTIRDYTEMNDL 60
Query: 327 QCRF-PRRLVVLGFPCNQFGHQENCQNEEILNSLKYVRPGGGFQPTFTLIQKCDVNGQNE 503
Q R PR LVVLGFPCNQFGHQEN +NEEILNSLKYVRPGGGF+P FTL +KC+VNG+
Sbjct: 61 QKRLGPRGLVVLGFPCNQFGHQENGKNEEILNSLKYVRPGGGFEPNFTLFEKCEVNGEKA 120
Query: 504 HPVFAYLKDKLPYPYDDPFSLMTDPKFIIWSPVRRSDVSWNFEKFLIGPEGEPFRRYSRT 683
HP+F +L++ LP P DDP +LMTDPK+IIWSPV R+D++WNFEKFL+GP+G P RRYSR
Sbjct: 121 HPLFTFLRNALPTPSDDPTALMTDPKYIIWSPVCRNDIAWNFEKFLVGPDGVPVRRYSRR 180
Query: 684 FPTINIEPDIKRLL 725
F TI+IEPDI+ LL
Sbjct: 181 FRTIDIEPDIETLL 194
>ref|NP_663426.2| glutathione peroxidase 6 precursor [Mus musculus].
Length = 221
Score = 150 bits (379), Expect = 2e-36
Identities = 82/185 (44%), Positives = 111/185 (60%), Gaps = 2/185 (1%)
Frame = +3
Query: 177 IAKSFYDLSAISLDG-EKVDFNTFRGRAVLIENVASL*GTTTRDFTQLNELQCRF-PRRL 350
+ + Y+ A ++DG E V+F + G+ +L NVAS G T + +LN LQ P +
Sbjct: 36 VTGTVYEYGANTIDGGEFVNFQQYAGKHILFVNVASFCGLTAT-YPELNTLQEELKPFNV 94
Query: 351 VVLGFPCNQFGHQENCQNEEILNSLKYVRPGGGFQPTFTLIQKCDVNGQNEHPVFAYLKD 530
VLGFPCNQFG QE +N EIL LKYVRPGGG+ P F L +K DVNG NE VF++LK+
Sbjct: 95 TVLGFPCNQFGKQEPGKNSEILLGLKYVRPGGGYVPNFQLFEKGDVNGDNEQKVFSFLKN 154
Query: 531 KLPYPYDDPFSLMTDPKFIIWSPVRRSDVSWNFEKFLIGPEGEPFRRYSRTFPTINIEPD 710
P P + F P+ + W P++ D+ WNFEKFL+GP+G P R+ P ++ D
Sbjct: 155 SCP-PTSELFG---SPEHLFWDPMKVHDIRWNFEKFLVGPDGVPVMRWFHHTPVRIVQSD 210
Query: 711 IKRLL 725
I L
Sbjct: 211 IMEYL 215
>ref|NP_034473.2| epididymal secretory glutathione peroxidase precursor [Mus
musculus].
Length = 221
Score = 149 bits (377), Expect = 3e-36
Identities = 82/182 (45%), Positives = 107/182 (58%), Gaps = 2/182 (1%)
Frame = +3
Query: 186 SFYDLSAISLDG-EKVDFNTFRGRAVLIENVASL*GTTTRDFTQLNELQCRF-PRRLVVL 359
+ YD A+SL+G E + F + G+ VL NVA+ G T + + +LN LQ P LV+L
Sbjct: 39 TIYDYEALSLNGKEHIPFKQYAGKHVLFVNVATYCGLTIQ-YPELNALQEDLKPFGLVIL 97
Query: 360 GFPCNQFGHQENCQNEEILNSLKYVRPGGGFQPTFTLIQKCDVNGQNEHPVFAYLKDKLP 539
GFPCNQFG QE N EIL LKYVRPG GF P F L K DVNG+NE +F +LK P
Sbjct: 98 GFPCNQFGKQEPGDNLEILPGLKYVRPGKGFLPNFQLFAKGDVNGENEQKIFTFLKRSCP 157
Query: 540 YPYDDPFSLMTDPKFIIWSPVRRSDVSWNFEKFLIGPEGEPFRRYSRTFPTINIEPDIKR 719
+P + + K W P++ D+ WNFEKFL+GP+G P R+ P ++ DI
Sbjct: 158 HPSE----TVVMSKHTFWEPIKVHDIRWNFEKFLVGPDGIPVMRWFHQAPVSTVKSDIMA 213
Query: 720 LL 725
L
Sbjct: 214 YL 215
>ref|NP_001077398.1| glutathione peroxidase 3 isoform 1 [Mus musculus].
Length = 248
Score = 146 bits (369), Expect = 2e-35
Identities = 78/178 (43%), Positives = 108/178 (60%), Gaps = 2/178 (1%)
Frame = +3
Query: 186 SFYDLSAISLDGEK-VDFNTFRGRAVLIENVASL*GTTTRDFTQLNELQCRF-PRRLVVL 359
+ Y+ A+++DGE+ + F + G+ +L NVAS G T + + +LN LQ P LV+L
Sbjct: 61 TIYEYGALTIDGEEYIPFKQYAGKYILFVNVASYUGLTDQ-YLELNALQEELGPFGLVIL 119
Query: 360 GFPCNQFGHQENCQNEEILNSLKYVRPGGGFQPTFTLIQKCDVNGQNEHPVFAYLKDKLP 539
GFP NQFG QE +N EIL SLKYVRPGGGF P F L +K DVNG+ E + +LK+ P
Sbjct: 120 GFPSNQFGKQEPGENSEILPSLKYVRPGGGFVPNFQLFEKGDVNGEKEQKFYTFLKNSCP 179
Query: 540 YPYDDPFSLMTDPKFIIWSPVRRSDVSWNFEKFLIGPEGEPFRRYSRTFPTINIEPDI 713
L+ P + W P++ D+ WNFEKFL+GP+G P R+ N++ DI
Sbjct: 180 ----PTAELLGSPGRLFWEPMKIHDIRWNFEKFLVGPDGIPVMRWYHRTTVSNVKMDI 233
>ref|NP_032187.2| glutathione peroxidase 3 isoform 2 [Mus musculus].
Length = 226
Score = 146 bits (369), Expect = 2e-35
Identities = 78/178 (43%), Positives = 108/178 (60%), Gaps = 2/178 (1%)
Frame = +3
Query: 186 SFYDLSAISLDGEK-VDFNTFRGRAVLIENVASL*GTTTRDFTQLNELQCRF-PRRLVVL 359
+ Y+ A+++DGE+ + F + G+ +L NVAS G T + + +LN LQ P LV+L
Sbjct: 39 TIYEYGALTIDGEEYIPFKQYAGKYILFVNVASYUGLTDQ-YLELNALQEELGPFGLVIL 97
Query: 360 GFPCNQFGHQENCQNEEILNSLKYVRPGGGFQPTFTLIQKCDVNGQNEHPVFAYLKDKLP 539
GFP NQFG QE +N EIL SLKYVRPGGGF P F L +K DVNG+ E + +LK+ P
Sbjct: 98 GFPSNQFGKQEPGENSEILPSLKYVRPGGGFVPNFQLFEKGDVNGEKEQKFYTFLKNSCP 157
Query: 540 YPYDDPFSLMTDPKFIIWSPVRRSDVSWNFEKFLIGPEGEPFRRYSRTFPTINIEPDI 713
L+ P + W P++ D+ WNFEKFL+GP+G P R+ N++ DI
Sbjct: 158 ----PTAELLGSPGRLFWEPMKIHDIRWNFEKFLVGPDGIPVMRWYHRTTVSNVKMDI 211
>ref|NP_077160.1| glutathione peroxidase 7 precursor [Mus musculus].
Length = 186
Score = 87.8 bits (216), Expect = 1e-17
Identities = 57/188 (30%), Positives = 82/188 (43%), Gaps = 1/188 (0%)
Frame = +3
Query: 153 LCTSTMAYIAKSFYDLSAISLDGEKVDFNTFRGRAVLIENVASL*GTTTRDFTQLNELQC 332
L + A + FYD A+++ G+ V +RG L+ NVAS G T +++ L +LQ
Sbjct: 12 LWAAACAQSEQDFYDFKAVNIRGKLVSLEKYRGSVSLVVNVASECGFTDQNYRALQQLQR 71
Query: 333 RF-PRRLVVLGFPCNQFGHQENCQNEEILNSLKYVRPGGGFQPTFTLIQKCDVNGQNEHP 509
P VL FPCNQFG QE N EI N + + +F + K V G HP
Sbjct: 72 DLGPHHFNVLAFPCNQFGQQEPDTNREIENFARRT-----YSVSFPMFSKIAVTGTGAHP 126
Query: 510 VFAYLKDKLPYPYDDPFSLMTDPKFIIWSPVRRSDVSWNFEKFLIGPEGEPFRRYSRTFP 689
F YL + + +WNF K+L+ P+G+ + T P
Sbjct: 127 AFKYL-----------------------TQTSGKEPTWNFWKYLVDPDGKVVGAWDPTVP 163
Query: 690 TINIEPDI 713
I+P I
Sbjct: 164 VAEIKPRI 171
>ref|NP_032188.3| phospholipid hydroperoxide glutathione peroxidase, nuclear isoform
2 precursor [Mus musculus].
Length = 197
Score = 85.1 bits (209), Expect = 9e-17
Identities = 61/193 (31%), Positives = 90/193 (46%), Gaps = 2/193 (1%)
Frame = +3
Query: 141 LCHSLCTSTMAY-IAKSFYDLSAISLDGEKVDFNTFRGRAVLIENVASL*GTTTRDFTQL 317
L ++C S + A+S ++ SA +DG V + +RG ++ NVAS G T ++TQL
Sbjct: 24 LAGTMCASRDDWRCARSMHEFSAKDIDGHMVCLDKYRGFVCIVTNVASQUGKTDVNYTQL 83
Query: 318 NELQCRFPR-RLVVLGFPCNQFGHQENCQNEEILNSLKYVRPGGGFQPTFTLIQKCDVNG 494
+L R+ L +L FPCNQFG QE N+EI G+ F + K VNG
Sbjct: 84 VDLHARYAECGLRILAFPCNQFGRQEPGSNQEIKEF------AAGYNVKFDMYSKICVNG 137
Query: 495 QNEHPVFAYLKDKLPYPYDDPFSLMTDPKFIIWSPVRRSDVSWNFEKFLIGPEGEPFRRY 674
+ HP++ ++K PK + + + WNF KFLI G +RY
Sbjct: 138 DDAHPLWKWMK--------------VQPK---GRGMLGNAIKWNFTKFLIDKNGCVVKRY 180
Query: 675 SRTFPTINIEPDI 713
IE D+
Sbjct: 181 GPMEEPQVIEKDL 193
>ref|NP_001032830.2| phospholipid hydroperoxide glutathione peroxidase, nuclear isoform
1 precursor [Mus musculus].
Length = 253
Score = 84.7 bits (208), Expect = 1e-16
Identities = 58/179 (32%), Positives = 84/179 (46%), Gaps = 1/179 (0%)
Frame = +3
Query: 180 AKSFYDLSAISLDGEKVDFNTFRGRAVLIENVASL*GTTTRDFTQLNELQCRFPR-RLVV 356
A+S ++ SA +DG V + +RG ++ NVAS G T ++TQL +L R+ L +
Sbjct: 94 ARSMHEFSAKDIDGHMVCLDKYRGFVCIVTNVASQUGKTDVNYTQLVDLHARYAECGLRI 153
Query: 357 LGFPCNQFGHQENCQNEEILNSLKYVRPGGGFQPTFTLIQKCDVNGQNEHPVFAYLKDKL 536
L FPCNQFG QE N+EI G+ F + K VNG + HP++ ++K
Sbjct: 154 LAFPCNQFGRQEPGSNQEIKEF------AAGYNVKFDMYSKICVNGDDAHPLWKWMK--- 204
Query: 537 PYPYDDPFSLMTDPKFIIWSPVRRSDVSWNFEKFLIGPEGEPFRRYSRTFPTINIEPDI 713
PK + + + WNF KFLI G +RY IE D+
Sbjct: 205 -----------VQPK---GRGMLGNAIKWNFTKFLIDKNGCVVKRYGPMEEPQVIEKDL 249
>ref|NP_081403.1| probable glutathione peroxidase 8 [Mus musculus].
Length = 209
Score = 72.4 bits (176), Expect = 6e-13
Identities = 50/181 (27%), Positives = 75/181 (41%), Gaps = 1/181 (0%)
Frame = +3
Query: 186 SFYDLSAISLDGEKVDFNTFRGRAVLIENVASL*GTTTRDFTQLNELQCRF-PRRLVVLG 362
SFY G V F+G+A L+ NVAS T + + L EL F P VL
Sbjct: 46 SFYSFEVKDAKGRTVSLEKFKGKASLVVNVASDCRFTDKSYQTLRELHKEFGPYHFNVLA 105
Query: 363 FPCNQFGHQENCQNEEILNSLKYVRPGGGFQPTFTLIQKCDVNGQNEHPVFAYLKDKLPY 542
FPCNQFG E ++E+ + + R G TF + K + G P F ++ D
Sbjct: 106 FPCNQFGESEPKSSKEVES---FARQNYGV--TFPIFHKIKILGPEAEPAFRFIVDS--- 157
Query: 543 PYDDPFSLMTDPKFIIWSPVRRSDVSWNFEKFLIGPEGEPFRRYSRTFPTINIEPDIKRL 722
+ + WNF K+L+ PEG+ + + P I P + ++
Sbjct: 158 --------------------SKKEPRWNFWKYLVNPEGQVVKFWRPEEPLEAIRPHVSQM 197
Query: 723 L 725
+
Sbjct: 198 I 198
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 40,509,108
Number of extensions: 1138623
Number of successful extensions: 3468
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 3451
Number of HSP's successfully gapped: 10
Length of query: 370
Length of database: 15,617,559
Length adjustment: 103
Effective length of query: 267
Effective length of database: 12,523,851
Effective search space: 3343868217
Effective search space used: 3343868217
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-003361
(1110 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001108608.1| glutathione peroxidase 2 [Sus scrofa]. 393 e-109
Alignment gi|NP_999366.1| glutathione peroxidase 1 [Sus scrofa]. 249 1e-66
Alignment gi|NP_999051.1| epididymal secretory glutathione peroxidase pre... 157 1e-38
Alignment gi|NP_001131079.1| glutathione peroxidase 6 [Sus scrofa]. 150 9e-37
Alignment gi|NP_001108627.1| glutathione peroxidase 3 [Sus scrofa]. 150 2e-36
Alignment gi|NP_999572.1| phospholipid hydroperoxide glutathione peroxida... 84 1e-16
Alignment gi|XP_003134018.1| PREDICTED: probable glutathione peroxidase 8... 80 3e-15
Alignment gi|XP_003133997.2| PREDICTED: probable glutathione peroxidase 8... 67 1e-11
Alignment gi|XP_003361726.1| PREDICTED: glutathione peroxidase 7-like [Su... 57 2e-08
>ref|NP_001108608.1| glutathione peroxidase 2 [Sus scrofa].
Length = 190
Score = 393 bits (1009), Expect = e-109
Identities = 189/190 (99%), Positives = 189/190 (99%)
Frame = +3
Query: 168 MAYIAKSFYDLSAISLDGEKVDFNTFRGRAVLIENVASL*GTTTRDFTQLNELQCRFPRR 347
MAYIAKSFYDLSAISLDGEKVDFNTFRGRAVLIENVASL GTTTRDFTQLNELQCRFPRR
Sbjct: 1 MAYIAKSFYDLSAISLDGEKVDFNTFRGRAVLIENVASLUGTTTRDFTQLNELQCRFPRR 60
Query: 348 LVVLGFPCNQFGHQENCQNEEILNSLKYVRPGGGFQPTFTLIQKCDVNGQNEHPVFAYLK 527
LVVLGFPCNQFGHQENCQNEEILNSLKYVRPGGGFQPTFTLIQKCDVNGQNEHPVFAYLK
Sbjct: 61 LVVLGFPCNQFGHQENCQNEEILNSLKYVRPGGGFQPTFTLIQKCDVNGQNEHPVFAYLK 120
Query: 528 DKLPYPYDDPFSLMTDPKFIIWSPVRRSDVSWNFEKFLIGPEGEPFRRYSRTFPTINIEP 707
DKLPYPYDDPFSLMTDPKFIIWSPVRRSDVSWNFEKFLIGPEGEPFRRYSRTFPTINIEP
Sbjct: 121 DKLPYPYDDPFSLMTDPKFIIWSPVRRSDVSWNFEKFLIGPEGEPFRRYSRTFPTINIEP 180
Query: 708 DIKRLLKVAI 737
DIKRLLKVAI
Sbjct: 181 DIKRLLKVAI 190
>ref|NP_999366.1| glutathione peroxidase 1 [Sus scrofa].
Length = 206
Score = 249 bits (637), Expect = 1e-66
Identities = 122/187 (65%), Positives = 145/187 (77%), Gaps = 2/187 (1%)
Frame = +3
Query: 171 AYIAKSFYDLSAISL-DGEKVDFNTFRGRAVLIENVASL*GTTTRDFTQLNELQCRF-PR 344
A +S Y SA L GE + + RG+ +LIENVASL GTT RD+TQ+NELQ R PR
Sbjct: 13 AVAPRSVYAFSARPLAGGEPISLGSLRGKVLLIENVASLUGTTVRDYTQMNELQRRLGPR 72
Query: 345 RLVVLGFPCNQFGHQENCQNEEILNSLKYVRPGGGFQPTFTLIQKCDVNGQNEHPVFAYL 524
LVVLGFPCNQFGHQEN +N EILN LKYVRPGGGF+P F L +KC+VNG N HP+FA+L
Sbjct: 73 GLVVLGFPCNQFGHQENAKNGEILNCLKYVRPGGGFEPNFMLFEKCEVNGANAHPLFAFL 132
Query: 525 KDKLPYPYDDPFSLMTDPKFIIWSPVRRSDVSWNFEKFLIGPEGEPFRRYSRTFPTINIE 704
++ LP P DD +LMTDPKFI WSPV R+D++WNFEKFL+GP+G P RRYSR F TI+IE
Sbjct: 133 REALPTPSDDATALMTDPKFITWSPVCRNDIAWNFEKFLVGPDGVPLRRYSRRFLTIDIE 192
Query: 705 PDIKRLL 725
PDI+ LL
Sbjct: 193 PDIEALL 199
>ref|NP_999051.1| epididymal secretory glutathione peroxidase precursor [Sus scrofa].
Length = 219
Score = 157 bits (397), Expect = 1e-38
Identities = 85/186 (45%), Positives = 112/186 (60%), Gaps = 2/186 (1%)
Frame = +3
Query: 177 IAKSFYDLSAISLDG-EKVDFNTFRGRAVLIENVASL*GTTTRDFTQLNELQCRF-PRRL 350
+ + YD A +L+G E + F + G+ VL NVA+ G T + + +LN LQ P L
Sbjct: 34 VTGTIYDYDAFTLNGNEHIQFKQYAGKHVLFVNVATYCGLTAQ-YPELNTLQEELKPFGL 92
Query: 351 VVLGFPCNQFGHQENCQNEEILNSLKYVRPGGGFQPTFTLIQKCDVNGQNEHPVFAYLKD 530
VVLGFPCNQFG QE +N EIL LKYVRPGGG+ P F L +K DVNG+ E VF +LK
Sbjct: 93 VVLGFPCNQFGKQEPGENSEILLGLKYVRPGGGYVPNFQLFEKGDVNGEKEQKVFTFLKH 152
Query: 531 KLPYPYDDPFSLMTDPKFIIWSPVRRSDVSWNFEKFLIGPEGEPFRRYSRTFPTINIEPD 710
P+P + L+ +I W P+R D+ WNFEKFL+GP+G P R+ P ++ D
Sbjct: 153 SCPHPSE----LIGSIGYISWEPIRVHDIRWNFEKFLVGPDGVPVMRWVHETPISTVKSD 208
Query: 711 IKRLLK 728
I LK
Sbjct: 209 ILAYLK 214
>ref|NP_001131079.1| glutathione peroxidase 6 [Sus scrofa].
Length = 221
Score = 150 bits (380), Expect = 9e-37
Identities = 81/186 (43%), Positives = 111/186 (59%), Gaps = 2/186 (1%)
Frame = +3
Query: 177 IAKSFYDLSAISLDGEK-VDFNTFRGRAVLIENVASL*GTTTRDFTQLNELQCRF-PRRL 350
+ + Y+ A++L+GE+ + F + G+ VL NVA+ G T + + +LN LQ P +
Sbjct: 36 VTGTIYEYGALTLNGEEYIPFKQYAGKHVLFVNVATYUGLTAQ-YPELNALQEELKPFGV 94
Query: 351 VVLGFPCNQFGHQENCQNEEILNSLKYVRPGGGFQPTFTLIQKCDVNGQNEHPVFAYLKD 530
VVLGFPCNQFG QE +N EIL LKYVRPGGGF P F L +K DVNG+ E VF +LK+
Sbjct: 95 VVLGFPCNQFGKQEPAKNSEILLGLKYVRPGGGFVPNFQLFEKGDVNGEKEQKVFTFLKN 154
Query: 531 KLPYPYDDPFSLMTDPKFIIWSPVRRSDVSWNFEKFLIGPEGEPFRRYSRTFPTINIEPD 710
P D L+ + W P++ D+ WNFEKFL+GP+G P R+ ++ D
Sbjct: 155 SCPPTSD----LLGSSNQLFWEPMKVHDIRWNFEKFLVGPDGVPVMRWYHRASVSTVKSD 210
Query: 711 IKRLLK 728
I LK
Sbjct: 211 IMEYLK 216
>ref|NP_001108627.1| glutathione peroxidase 3 [Sus scrofa].
Length = 226
Score = 150 bits (378), Expect = 2e-36
Identities = 82/177 (46%), Positives = 112/177 (63%), Gaps = 3/177 (1%)
Frame = +3
Query: 177 IAKSFYDLSAISLDGEK-VDFNTFRGRAVLIENVASL*GTTTRDFTQLNELQCRF-PRRL 350
++ + Y+ A+++DGE+ + F + G+ VL NVAS G T + + +LN LQ F P L
Sbjct: 36 VSGTIYEYGALTIDGEEYIPFKKYAGKYVLFVNVASYUGLTGQ-YVELNALQEEFEPFGL 94
Query: 351 VVLGFPCNQFGHQENCQNEEILNSLKYVRPGGGFQPTFTLIQKCDVNGQNEHPVFAYLKD 530
V+LGFPCNQFG QE N EIL++L+YVRPGGGF P F L +K DVNG+ E + +LK+
Sbjct: 95 VILGFPCNQFGKQEPGDNSEILSTLRYVRPGGGFIPNFQLFEKGDVNGEKEQKFYTFLKN 154
Query: 531 KLPYPYDDPFSLMTDPKFIIWSPVRRSDVSWNFEKFLIGPEGEPFRR-YSRTFPTIN 698
P L+ P + W P++ D+ WNFEKFL+GP+G P R Y RT TIN
Sbjct: 155 ACP----PTSELLGSPSRLFWEPMKVHDIRWNFEKFLVGPDGVPVMRWYHRT--TIN 205
>ref|NP_999572.1| phospholipid hydroperoxide glutathione peroxidase, mitochondrial
precursor [Sus scrofa].
Length = 197
Score = 84.3 bits (207), Expect = 1e-16
Identities = 60/193 (31%), Positives = 90/193 (46%), Gaps = 2/193 (1%)
Frame = +3
Query: 141 LCHSLCTSTMAY-IAKSFYDLSAISLDGEKVDFNTFRGRAVLIENVASL*GTTTRDFTQL 317
L ++C S + A+S ++ SA +DG V+ + +RG ++ NVAS G T ++TQL
Sbjct: 24 LAGTMCASRDDWRCARSMHEFSAKDIDGHMVNLDKYRGYVCIVTNVASQUGKTEVNYTQL 83
Query: 318 NELQCRFPR-RLVVLGFPCNQFGHQENCQNEEILNSLKYVRPGGGFQPTFTLIQKCDVNG 494
+L R+ L +L FPCNQFG QE + EI G+ F + K VNG
Sbjct: 84 VDLHARYAECGLRILAFPCNQFGRQEPGSDAEIKEF------AAGYNVKFDMFSKICVNG 137
Query: 495 QNEHPVFAYLKDKLPYPYDDPFSLMTDPKFIIWSPVRRSDVSWNFEKFLIGPEGEPFRRY 674
+ HP++ ++K PK + + + WNF KFLI G +RY
Sbjct: 138 DDAHPLWKWMK--------------VQPK---GRGMLGNAIKWNFTKFLIDKNGCVVKRY 180
Query: 675 SRTFPTINIEPDI 713
IE D+
Sbjct: 181 GPMEEPQVIEKDL 193
>ref|XP_003134018.1| PREDICTED: probable glutathione peroxidase 8-like [Sus scrofa].
Length = 209
Score = 79.7 bits (195), Expect = 3e-15
Identities = 53/185 (28%), Positives = 78/185 (42%), Gaps = 1/185 (0%)
Frame = +3
Query: 186 SFYDLSAISLDGEKVDFNTFRGRAVLIENVASL*GTTTRDFTQLNELQCRF-PRRLVVLG 362
SFY+ G V F+G+ L+ NVAS T R++ L EL F P VL
Sbjct: 46 SFYNFEVKDAKGRTVSLEKFKGKVALVVNVASDCQLTDRNYLALQELHKEFGPFHFSVLA 105
Query: 363 FPCNQFGHQENCQNEEILNSLKYVRPGGGFQPTFTLIQKCDVNGQNEHPVFAYLKDKLPY 542
FPCNQFG E ++E+L+ + + TF + K + G P F +L D
Sbjct: 106 FPCNQFGESEPRPSKEVLSFAR-----NNYGVTFPIFHKIKILGSEAEPAFRFLVDS--- 157
Query: 543 PYDDPFSLMTDPKFIIWSPVRRSDVSWNFEKFLIGPEGEPFRRYSRTFPTINIEPDIKRL 722
+ + WNF K+L+ PEG+ + + P I P+I L
Sbjct: 158 --------------------SKKEPRWNFWKYLVNPEGQVVKYWRPEEPIEVIRPEIAAL 197
Query: 723 LKVAI 737
++ I
Sbjct: 198 IRQMI 202
>ref|XP_003133997.2| PREDICTED: probable glutathione peroxidase 8-like [Sus scrofa].
Length = 209
Score = 67.4 bits (163), Expect = 1e-11
Identities = 50/185 (27%), Positives = 73/185 (39%), Gaps = 1/185 (0%)
Frame = +3
Query: 186 SFYDLSAISLDGEKVDFNTFRGRAVLIENVASL*GTTTRDFTQLNELQCRF-PRRLVVLG 362
SFY+ G F L+ NVAS T R++ L EL F P VL
Sbjct: 46 SFYNFEVKDAKGRTXXXXXFFREVALVVNVASDCQLTDRNYLALQELHKEFGPFHFSVLA 105
Query: 363 FPCNQFGHQENCQNEEILNSLKYVRPGGGFQPTFTLIQKCDVNGQNEHPVFAYLKDKLPY 542
FPCNQFG E ++E+L+ + + TF + K + G P F +L D
Sbjct: 106 FPCNQFGESEPRPSKEVLSFAR-----NNYGVTFPIFHKIKILGSEAEPAFRFLVDS--- 157
Query: 543 PYDDPFSLMTDPKFIIWSPVRRSDVSWNFEKFLIGPEGEPFRRYSRTFPTINIEPDIKRL 722
+ + WNF K+L+ PEG+ + + P P+I L
Sbjct: 158 --------------------SKKEPRWNFWKYLVNPEGQVVKYWRPEEPIEVNRPEIAVL 197
Query: 723 LKVAI 737
++ I
Sbjct: 198 IRQMI 202
>ref|XP_003361726.1| PREDICTED: glutathione peroxidase 7-like [Sus scrofa].
Length = 242
Score = 57.0 bits (136), Expect = 2e-08
Identities = 43/151 (28%), Positives = 62/151 (41%), Gaps = 1/151 (0%)
Frame = +3
Query: 288 GTTTRDFTQLNELQCRFPRRL-VVLGFPCNQFGHQENCQNEEILNSLKYVRPGGGFQPTF 464
G T + + L +LQ R L VL FPCNQFG QE N+EI + + + +F
Sbjct: 117 GFTDQHYRALQQLQ----RDLGXVLAFPCNQFGQQEPDSNKEIESFARRT-----YSVSF 167
Query: 465 TLIQKCDVNGQNEHPVFAYLKDKLPYPYDDPFSLMTDPKFIIWSPVRRSDVSWNFEKFLI 644
+ K V G HP F YL + + +WNF K+L+
Sbjct: 168 PMFSKIAVTGTGAHPAFKYL-----------------------TQTSGKEPTWNFWKYLV 204
Query: 645 GPEGEPFRRYSRTFPTINIEPDIKRLLKVAI 737
P+G+ + T I P I L++ I
Sbjct: 205 APDGKVVGAWDPTVSVEEIRPQITALVRKLI 235
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 30,766,403
Number of extensions: 949601
Number of successful extensions: 2737
Number of sequences better than 1.0e-05: 9
Number of HSP's gapped: 2722
Number of HSP's successfully gapped: 9
Length of query: 370
Length of database: 11,343,932
Length adjustment: 100
Effective length of query: 270
Effective length of database: 8,854,232
Effective search space: 2390642640
Effective search space used: 2390642640
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-003361
(1110 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr07 1229 0.0
Sscrofa_Chr13 60 3e-06
>Sscrofa_Chr07
|| Length = 134764511
Score = 1229 bits (620), Expect = 0.0
Identities = 673/684 (98%), Gaps = 5/684 (0%)
Strand = Plus / Minus
Query: 387 caggagaactgtcagaatgaggagatcctgaacagcctcaagtacgtccgccctgggggt 446
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95388974 caggagaactgtcagaatgaggagatcctgaacagcctcaagtacgtccgccctgggggt 95388915
Query: 447 ggattccagcccacctttacccttatccagaagtgtgacgtgaatggtcagaatgagcat 506
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95388914 ggattccagcccacctttacccttatccagaagtgtgacgtgaatggtcagaatgagcat 95388855
Query: 507 cctgtcttcgcctacctgaaggacaagctgccctacccttatgacgacccgttttccctc 566
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95388854 cctgtcttcgcctacctgaaggacaagctgccctacccttatgacgacccgttttccctc 95388795
Query: 567 atgactgatcccaagttcatcatctggagccctgtgcgccgctcagatgtgtcctggaac 626
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95388794 atgactgatcccaagttcatcatctggagccctgtgcgccgctcagatgtgtcctggaac 95388735
Query: 627 tttgagaagttcctcatcgggccagagggggagcccttccgacgctacagccgcaccttc 686
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95388734 tttgagaagttcctcatcgggccagagggggagcccttccgacgctacagccgcaccttc 95388675
Query: 687 cccaccatcaacatcgagcctgacatcaagcgcctcctcaaagttgccatataaacactg 746
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95388674 cccaccatcaacatcgagcctgacatcaagcgcctcctcaaagttgccatataaacactg 95388615
Query: 747 accgctcagcacacagatctcctacttcctcctgcccctgagtatccatccttagcattc 806
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95388614 gccgctcagcacacagatctcctacttcctcctgcccctgagtatccatccttagcattc 95388555
Query: 807 agtgtgccctcagaacactgagctggacccaggctttcccttgagatccgtccccttcat 866
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95388554 agtgtgccctcagaacactgagctggacccaggctttcccttgagatccgtccccttcat 95388495
Query: 867 caaagaaccttgcctttctgggtctgttt-cttcccatccctccaaccttcttgttggtg 925
||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||
Sbjct: 95388494 caaagaaccttgcctttct-ggtctgtttccttcccatccctccaaccttcttgttggtg 95388436
Query: 926 attc-acccggggactctgagacctgggtgggctctgggctgtcacagaatgatggcacc 984
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95388435 attcaacccggggactctgagacctgggtgggctctgggctgtcacagaatgatggcacc 95388376
Query: 985 ttcctaaat-catatgggaagtgtttgaaaagtgtgaggggcctggagccagccctgcag 1043
||||||||| ||||||||| |||||||| ||||||||||||||||||||||||| |||
Sbjct: 95388375 ttcctaaatccatatgggaggtgtttgagaagtgtgaggggcctggagccagcctgccag 95388316
Query: 1044 ctgagt-caataaagggtgggtgt 1066
|||||| |||||||||||||||||
Sbjct: 95388315 ctgagtccaataaagggtgggtgt 95388292
Score = 765 bits (386), Expect = 0.0
Identities = 389/390 (99%)
Strand = Plus / Minus
Query: 1 ccttgctcaaacagcacttacaggtgggtggctgcttttgctaagtcatcctggggatgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95392551 ccttgctcaaacagcacttacaggtgggtggctgcttttgctaagtcatcctggggatgc 95392492
Query: 61 tcaaagccccactgtgaaattcttcctggctcctccttcctcattcccactttaatagac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95392491 tcaaagccccactgtgaaattcttcctggctcctccttcctcattcccactttaatagac 95392432
Query: 121 cctcaggtacgctcacaccactctgccactcactctgcacttccaccatggcttacattg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95392431 cctcaggtacgctcacaccactctgccactcactctgcacttccaccatggcttacattg 95392372
Query: 181 ccaagtccttctacgacctcagtgctatcagcctggacggggagaaggtagatttcaaca 240
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95392371 ccaagtccttctatgacctcagtgctatcagcctggacggggagaaggtagatttcaaca 95392312
Query: 241 cattccgaggcagggcagtgctgattgagaatgtggcctcgctctgaggcacaaccaccc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95392311 cattccgaggcagggcagtgctgattgagaatgtggcctcgctctgaggcacaaccaccc 95392252
Query: 301 gggacttcacccaactcaacgagctgcaatgccgctttcccaggcgcctggtggttcttg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95392251 gggacttcacccaactcaacgagctgcaatgccgctttcccaggcgcctggtggttcttg 95392192
Query: 361 gcttcccttgcaaccaatttggacatcagg 390
||||||||||||||||||||||||||||||
Sbjct: 95392191 gcttcccttgcaaccaatttggacatcagg 95392162
>Sscrofa_Chr13
|| Length = 218635234
Score = 60.0 bits (30), Expect = 3e-06
Identities = 78/94 (82%)
Strand = Plus / Minus
Query: 400 agaatgaggagatcctgaacagcctcaagtacgtccgccctgggggtggattccagccca 459
||||||||||||||||||| |||||||||||||||| || || || || ||| ||||||
Sbjct: 35147802 agaatgaggagatcctgaattgcctcaagtacgtccgaccaggcggcgggttcgagccca 35147743
Query: 460 cctttacccttatccagaagtgtgacgtgaatgg 493
||| | || || |||||||||| ||||||||
Sbjct: 35147742 acttcatgctcttcgagaagtgtgaggtgaatgg 35147709
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 30,853,361
Number of extensions: 214
Number of successful extensions: 214
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 211
Number of HSP's successfully gapped: 3
Length of query: 1110
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1089
Effective length of database: 2,808,413,156
Effective search space: 3058361926884
Effective search space used: 3058361926884
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)