Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-003362
(980 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001075916.1| septin-11 [Bos taurus]. 518 e-148
Alignment gi|NP_001030507.1| septin-6 [Bos taurus]. 433 e-122
Alignment gi|NP_001069698.1| septin-8 [Bos taurus]. 431 e-122
Alignment gi|NP_001039641.1| septin-10 [Bos taurus]. 426 e-120
Alignment gi|NP_001095557.1| septin-14 [Bos taurus]. 363 e-101
Alignment gi|NP_001070417.1| neuronal-specific septin-3 [Bos taurus]. 222 3e-58
Alignment gi|NP_001001168.1| septin-7 [Bos taurus]. 222 4e-58
Alignment gi|XP_002696247.1| PREDICTED: OVARIAN/Breast septin gamma-like ... 217 1e-56
Alignment gi|XP_001790165.2| PREDICTED: septin 9 [Bos taurus]. 217 1e-56
Alignment gi|NP_001039557.1| septin-2 [Bos taurus]. 212 5e-55
>ref|NP_001075916.1| septin-11 [Bos taurus].
Length = 425
Score = 518 bits (1335), Expect(2) = e-148
Identities = 259/261 (99%), Positives = 261/261 (100%)
Frame = +2
Query: 167 RPSNEELRNLSLSGHVGFDSLPDQLVNKSTSQGFCFNILCVGETGIGKSTLMDTLFNTKF 346
RPSNEELRNLSLSGHVGFDSLPDQLVNKSTSQGFCFNILCVGETGIGKSTLMDTLFNTKF
Sbjct: 7 RPSNEELRNLSLSGHVGFDSLPDQLVNKSTSQGFCFNILCVGETGIGKSTLMDTLFNTKF 66
Query: 347 ESDPATHNEPGVRLKARSYELQESNVRLKLTIVDTVGFGDQINKDDSYKPIVEYIDAQFE 526
ESDPATHNEPGVRLKARSYELQESNVRLKLTIVDTVGFGDQINKDDSYKPIVEYIDAQFE
Sbjct: 67 ESDPATHNEPGVRLKARSYELQESNVRLKLTIVDTVGFGDQINKDDSYKPIVEYIDAQFE 126
Query: 527 AYLQEELKIKRSLFNYHDTRIHACLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIAKAD 706
AYLQEELKIKRSLFNYHDTRIHACLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIAKAD
Sbjct: 127 AYLQEELKIKRSLFNYHDTRIHACLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIAKAD 186
Query: 707 TIAKNELHKFKSKIMSELVSNGVQIYQFPTDEETVAEINATMSVHLPFAVVGSTEEVKIG 886
TIAKNELHKFKSKIMSELVSNGVQIYQFPTDEETVAEINATMSVHLPFAVVGSTEEVKIG
Sbjct: 187 TIAKNELHKFKSKIMSELVSNGVQIYQFPTDEETVAEINATMSVHLPFAVVGSTEEVKIG 246
Query: 887 HQMAKARQYPWGVVQVENENH 949
++MAKARQYPWGVVQVENENH
Sbjct: 247 NKMAKARQYPWGVVQVENENH 267
Score = 25.0 bits (53), Expect(2) = e-148
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 949 CDFVKLREML 978
CDFVKLREML
Sbjct: 268 CDFVKLREML 277
>ref|NP_001030507.1| septin-6 [Bos taurus].
Length = 427
Score = 433 bits (1114), Expect(2) = e-122
Identities = 211/261 (80%), Positives = 236/261 (90%)
Frame = +2
Query: 167 RPSNEELRNLSLSGHVGFDSLPDQLVNKSTSQGFCFNILCVGETGIGKSTLMDTLFNTKF 346
R E R + L+GHVGFDSLPDQLVNKS SQGFCFNILCVGETG+GKSTLMDTLFNTKF
Sbjct: 8 RQVGEGCRTVPLAGHVGFDSLPDQLVNKSVSQGFCFNILCVGETGLGKSTLMDTLFNTKF 67
Query: 347 ESDPATHNEPGVRLKARSYELQESNVRLKLTIVDTVGFGDQINKDDSYKPIVEYIDAQFE 526
E +PATH +PGV+L++ +Y+LQESNV LKLTIV TVGFGDQINK+DSYKPIVE+IDAQFE
Sbjct: 68 EGEPATHTQPGVQLRSNTYDLQESNVGLKLTIVSTVGFGDQINKEDSYKPIVEFIDAQFE 127
Query: 527 AYLQEELKIKRSLFNYHDTRIHACLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIAKAD 706
AYLQEELKI+R L YHD+RIHACLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIAK+D
Sbjct: 128 AYLQEELKIRRVLHTYHDSRIHACLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIAKSD 187
Query: 707 TIAKNELHKFKSKIMSELVSNGVQIYQFPTDEETVAEINATMSVHLPFAVVGSTEEVKIG 886
I+K+EL KFK KI SELV+NGVQIYQFPTD+E+VAEIN TM+ HLPFAV+GSTEE+KIG
Sbjct: 188 AISKSELTKFKIKITSELVNNGVQIYQFPTDDESVAEINGTMNAHLPFAVIGSTEELKIG 247
Query: 887 HQMAKARQYPWGVVQVENENH 949
++M KARQYPWG VQVENE H
Sbjct: 248 NKMMKARQYPWGTVQVENEAH 268
Score = 25.0 bits (53), Expect(2) = e-122
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 949 CDFVKLREML 978
CDFVKLREML
Sbjct: 269 CDFVKLREML 278
>ref|NP_001069698.1| septin-8 [Bos taurus].
Length = 442
Score = 431 bits (1109), Expect(2) = e-122
Identities = 210/256 (82%), Positives = 237/256 (92%)
Frame = +2
Query: 182 ELRNLSLSGHVGFDSLPDQLVNKSTSQGFCFNILCVGETGIGKSTLMDTLFNTKFESDPA 361
E R+LSL GHVGFDSLPDQLV+KS +QGF FNILCVGETGIGKSTLM+TLFNT FE++ A
Sbjct: 15 EPRSLSLGGHVGFDSLPDQLVSKSVTQGFSFNILCVGETGIGKSTLMNTLFNTTFETEEA 74
Query: 362 THNEPGVRLKARSYELQESNVRLKLTIVDTVGFGDQINKDDSYKPIVEYIDAQFEAYLQE 541
+H+E VRL+ ++Y+LQESNV+LKLTIVD VGFGDQINKD+SY+PIV+YIDAQFE YLQE
Sbjct: 75 SHHEECVRLRPQTYDLQESNVQLKLTIVDAVGFGDQINKDESYRPIVDYIDAQFENYLQE 134
Query: 542 ELKIKRSLFNYHDTRIHACLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIAKADTIAKN 721
ELKI+RSLF+YHDTRIH CLYFI PTGHSLKSLDLVTMKKLDSKVNIIPIIAKADTI+K+
Sbjct: 135 ELKIRRSLFDYHDTRIHVCLYFITPTGHSLKSLDLVTMKKLDSKVNIIPIIAKADTISKS 194
Query: 722 ELHKFKSKIMSELVSNGVQIYQFPTDEETVAEINATMSVHLPFAVVGSTEEVKIGHQMAK 901
ELHKFK KIM ELVSNGVQIYQFPTD+E VAEINA M+ HLPFAVVGSTEEVK+G+++ +
Sbjct: 195 ELHKFKIKIMGELVSNGVQIYQFPTDDEAVAEINAVMNAHLPFAVVGSTEEVKVGNKLVR 254
Query: 902 ARQYPWGVVQVENENH 949
ARQYPWGVVQVENENH
Sbjct: 255 ARQYPWGVVQVENENH 270
Score = 25.0 bits (53), Expect(2) = e-122
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 949 CDFVKLREML 978
CDFVKLREML
Sbjct: 271 CDFVKLREML 280
>ref|NP_001039641.1| septin-10 [Bos taurus].
Length = 453
Score = 426 bits (1096), Expect(2) = e-120
Identities = 204/254 (80%), Positives = 236/254 (92%)
Frame = +2
Query: 188 RNLSLSGHVGFDSLPDQLVNKSTSQGFCFNILCVGETGIGKSTLMDTLFNTKFESDPATH 367
R+L++SGHVGF+SLPDQLVN+S QGFCFNILCVGETGIGKSTL+DTLFNT FE ++H
Sbjct: 38 RSLTMSGHVGFESLPDQLVNRSIQQGFCFNILCVGETGIGKSTLIDTLFNTNFEDHESSH 97
Query: 368 NEPGVRLKARSYELQESNVRLKLTIVDTVGFGDQINKDDSYKPIVEYIDAQFEAYLQEEL 547
P VRLKA++YELQESNVRLKLTIV+TVGFGDQINK++SY+PIV+YIDAQFEAYLQEEL
Sbjct: 98 FYPHVRLKAQTYELQESNVRLKLTIVNTVGFGDQINKEESYQPIVDYIDAQFEAYLQEEL 157
Query: 548 KIKRSLFNYHDTRIHACLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIAKADTIAKNEL 727
KIKRSLFNYHD+R+H CLYFI+PTGHSLK+LDL+TMK LDSKVNIIP+IAKAD I+K EL
Sbjct: 158 KIKRSLFNYHDSRVHVCLYFISPTGHSLKTLDLLTMKSLDSKVNIIPVIAKADAISKTEL 217
Query: 728 HKFKSKIMSELVSNGVQIYQFPTDEETVAEINATMSVHLPFAVVGSTEEVKIGHQMAKAR 907
KFK K+MSELVSNGVQIYQFPTD+ET+A+INA+M+ HLPFAVVGS +EVK+G++M KAR
Sbjct: 218 QKFKIKLMSELVSNGVQIYQFPTDDETIAKINASMNGHLPFAVVGSMDEVKVGNKMVKAR 277
Query: 908 QYPWGVVQVENENH 949
QYPWGVVQVENENH
Sbjct: 278 QYPWGVVQVENENH 291
Score = 25.0 bits (53), Expect(2) = e-120
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 949 CDFVKLREML 978
CDFVKLREML
Sbjct: 292 CDFVKLREML 301
>ref|NP_001095557.1| septin-14 [Bos taurus].
Length = 432
Score = 363 bits (931), Expect(2) = e-101
Identities = 172/257 (66%), Positives = 215/257 (83%)
Frame = +2
Query: 179 EELRNLSLSGHVGFDSLPDQLVNKSTSQGFCFNILCVGETGIGKSTLMDTLFNTKFESDP 358
+ +R L++ GH GFD L QLV+KS QGF FNILCVGETGIGKSTL+DTLFNT +
Sbjct: 22 DNIRCLNMLGHFGFDCLAHQLVDKSVQQGFFFNILCVGETGIGKSTLIDTLFNTSLKDKK 81
Query: 359 ATHNEPGVRLKARSYELQESNVRLKLTIVDTVGFGDQINKDDSYKPIVEYIDAQFEAYLQ 538
++H V LK ++YELQE+NV+LKLT+V TVG+GDQINK+ SY+PIV+Y+DAQFE+YLQ
Sbjct: 82 SSHFYASVGLKIQTYELQENNVQLKLTVVKTVGYGDQINKEASYQPIVDYLDAQFESYLQ 141
Query: 539 EELKIKRSLFNYHDTRIHACLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIAKADTIAK 718
EELKIKRSL NY D+R+H CLYFI+PTGHSLKSLD++TMK +DSKVNIIP+IAKAD I+K
Sbjct: 142 EELKIKRSLGNYRDSRVHVCLYFISPTGHSLKSLDILTMKNIDSKVNIIPVIAKADAISK 201
Query: 719 NELHKFKSKIMSELVSNGVQIYQFPTDEETVAEINATMSVHLPFAVVGSTEEVKIGHQMA 898
++L FK IM+EL+SNG+Q+YQFPTD ET +N++M+ LPFAVVGSTEEVK+G +
Sbjct: 202 SDLQTFKCAIMNELISNGIQMYQFPTDNETSTHMNSSMNGLLPFAVVGSTEEVKVGKRTV 261
Query: 899 KARQYPWGVVQVENENH 949
+ RQYPWG++QVENENH
Sbjct: 262 RGRQYPWGILQVENENH 278
Score = 23.9 bits (50), Expect(2) = e-101
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +1
Query: 949 CDFVKLREML 978
CDFVKLR+ML
Sbjct: 279 CDFVKLRDML 288
>ref|NP_001070417.1| neuronal-specific septin-3 [Bos taurus].
Length = 357
Score = 222 bits (566), Expect = 3e-58
Identities = 114/261 (43%), Positives = 171/261 (65%), Gaps = 8/261 (3%)
Frame = +2
Query: 191 NLSLSGHVGFDSLPDQLVNKSTSQGFCFNILCVGETGIGKSTLMDTLFNTKFESDPATHN 370
N +L G++G D++ +Q+ K+ GF FNI+ VG++G+GKSTL++TLF ++ ++ N
Sbjct: 35 NPNLLGYIGIDTIIEQMRKKTMKTGFDFNIMVVGQSGLGKSTLVNTLFKSQVSRKASSWN 94
Query: 371 EPG-----VRLKARSYELQESNVRLKLTIVDTVGFGDQINKDDSYKPIVEYIDAQFEAYL 535
V +KA + ++E V++KLT++DT GFGDQIN ++ ++PI +YI+ Q+E +L
Sbjct: 95 REEKIPKTVEIKAIGHVIEEGGVKMKLTVIDTPGFGDQINNENCWEPIEKYINEQYEKFL 154
Query: 536 QEELKIKRSLFNYHDTRIHACLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIAKADTIA 715
+EE+ I R DTR+H CLYFI+PTGHSL+ LDL MK L VNIIP+IAKADT+
Sbjct: 155 KEEVNIARKK-RIPDTRVHCCLYFISPTGHSLRPLDLEFMKHLSKVVNIIPVIAKADTMT 213
Query: 716 KNELHKFKSKIMSELVSNGVQIY---QFPTDEETVAEINATMSVHLPFAVVGSTEEVKIG 886
E +FK ++ EL NG++ Y +F D E E N + +PFAVVGS +E ++
Sbjct: 214 LEEKSEFKQRVRKELEVNGIEFYPQKEFDEDLEDKTE-NDKIRESMPFAVVGSDKEYQVN 272
Query: 887 HQMAKARQYPWGVVQVENENH 949
+ R+ PWG+++VEN NH
Sbjct: 273 GKRVLGRKTPWGIIEVENLNH 293
>ref|NP_001001168.1| septin-7 [Bos taurus].
Length = 418
Score = 222 bits (565), Expect = 4e-58
Identities = 112/256 (43%), Positives = 168/256 (65%), Gaps = 5/256 (1%)
Frame = +2
Query: 197 SLSGHVGFDSLPDQLVNKSTSQGFCFNILCVGETGIGKSTLMDTLFNTKFESD----PAT 364
+L G+VGF +LP+Q+ KS +GF F ++ VGE+G+GKSTL+++LF T S P+
Sbjct: 7 NLEGYVGFANLPNQVYRKSVKRGFEFTLMVVGESGLGKSTLINSLFLTDLYSPEYPGPSH 66
Query: 365 HNEPGVRLKARSYELQESNVRLKLTIVDTVGFGDQINKDDSYKPIVEYIDAQFEAYLQEE 544
+ V+++ ++E V+L LTIVDT GFGD ++ + ++P+++YID++FE YL E
Sbjct: 67 RIKKTVQVEQSKVLIKEGGVQLLLTIVDTPGFGDAVDNSNCWQPVIDYIDSKFEDYLNAE 126
Query: 545 LKIKRSLFNYHDTRIHACLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIAKADTIAKNE 724
++ R D R+ CLYFIAP+GH LK LD+ MK+L KVNIIP+IAKADT+ E
Sbjct: 127 SRVNRR--QMPDNRVQCCLYFIAPSGHGLKPLDIEFMKRLHEKVNIIPLIAKADTLTPEE 184
Query: 725 LHKFKSKIMSELVSNGVQIYQFP-TDEETVAEINATMSVHLPFAVVGSTEEVKIGHQMAK 901
+FK +IM E+ + ++IY+FP TD+E ++ + LP AVVGS +++ + +
Sbjct: 185 CQQFKKQIMKEIQEHKIKIYEFPETDDEEENKLVKKIKDRLPLAVVGSNTIIEVNGKRVR 244
Query: 902 ARQYPWGVVQVENENH 949
RQYPWGV +VEN H
Sbjct: 245 GRQYPWGVAEVENGEH 260
>ref|XP_002696247.1| PREDICTED: OVARIAN/Breast septin gamma-like [Bos taurus].
Length = 686
Score = 217 bits (552), Expect = 1e-56
Identities = 112/256 (43%), Positives = 168/256 (65%), Gaps = 8/256 (3%)
Frame = +2
Query: 206 GHVGFDSLPDQLVNKSTSQGFCFNILCVGETGIGKSTLMDTLFNTKF--ESDPATHNE-- 373
G+VG DS+ +Q+ K+ QGF FNI+ VG++G+GKSTL++TLF +K +S T E
Sbjct: 377 GYVGIDSILEQMRRKAMKQGFEFNIMVVGQSGLGKSTLINTLFKSKISRKSVQPTSEERI 436
Query: 374 -PGVRLKARSYELQESNVRLKLTIVDTVGFGDQINKDDSYKPIVEYIDAQFEAYLQEELK 550
+ +K+ +++++E VR+KLT++DT GFGD IN ++ ++PI+++I+ Q+E YLQEE+
Sbjct: 437 PKTIEIKSITHDIEEKGVRMKLTVIDTPGFGDHINNENCWQPIMQFINDQYEKYLQEEVN 496
Query: 551 IKRSLFNYHDTRIHACLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIAKADTIAKNELH 730
I R DTR+H CLYFI TGHSL+ LD+ MK+L VNI+P+IAKADT+ E
Sbjct: 497 INRKK-RIPDTRVHCCLYFIPATGHSLRPLDIEFMKRLSKVVNIVPVIAKADTLTLEERV 555
Query: 731 KFKSKIMSELVSNGVQIY---QFPTDEETVAEINATMSVHLPFAVVGSTEEVKIGHQMAK 901
FK +I ++L+SNG+ +Y +F D E +N +PFAVVGS E ++ +
Sbjct: 556 YFKQRITADLLSNGIDVYPQKEFDEDSED-RLVNEKFREMIPFAVVGSDHEYQVNGKRIL 614
Query: 902 ARQYPWGVVQVENENH 949
R+ WG ++VEN H
Sbjct: 615 GRKTKWGTIEVENTTH 630
>ref|XP_001790165.2| PREDICTED: septin 9 [Bos taurus].
Length = 686
Score = 217 bits (552), Expect = 1e-56
Identities = 112/256 (43%), Positives = 168/256 (65%), Gaps = 8/256 (3%)
Frame = +2
Query: 206 GHVGFDSLPDQLVNKSTSQGFCFNILCVGETGIGKSTLMDTLFNTKF--ESDPATHNE-- 373
G+VG DS+ +Q+ K+ QGF FNI+ VG++G+GKSTL++TLF +K +S T E
Sbjct: 377 GYVGIDSILEQMRRKAMKQGFEFNIMVVGQSGLGKSTLINTLFKSKISRKSVQPTSEERI 436
Query: 374 -PGVRLKARSYELQESNVRLKLTIVDTVGFGDQINKDDSYKPIVEYIDAQFEAYLQEELK 550
+ +K+ +++++E VR+KLT++DT GFGD IN ++ ++PI+++I+ Q+E YLQEE+
Sbjct: 437 PKTIEIKSITHDIEEKGVRMKLTVIDTPGFGDHINNENCWQPIMQFINDQYEKYLQEEVN 496
Query: 551 IKRSLFNYHDTRIHACLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIAKADTIAKNELH 730
I R DTR+H CLYFI TGHSL+ LD+ MK+L VNI+P+IAKADT+ E
Sbjct: 497 INRKK-RIPDTRVHCCLYFIPATGHSLRPLDIEFMKRLSKVVNIVPVIAKADTLTLEERV 555
Query: 731 KFKSKIMSELVSNGVQIY---QFPTDEETVAEINATMSVHLPFAVVGSTEEVKIGHQMAK 901
FK +I ++L+SNG+ +Y +F D E +N +PFAVVGS E ++ +
Sbjct: 556 YFKQRITADLLSNGIDVYPQKEFDEDSED-RLVNEKFREMIPFAVVGSDHEYQVNGKRIL 614
Query: 902 ARQYPWGVVQVENENH 949
R+ WG ++VEN H
Sbjct: 615 GRKTKWGTIEVENTTH 630
>ref|NP_001039557.1| septin-2 [Bos taurus].
Length = 361
Score = 212 bits (539), Expect = 5e-55
Identities = 109/262 (41%), Positives = 163/262 (62%), Gaps = 9/262 (3%)
Frame = +2
Query: 191 NLSLSGHVGFDSLPDQLVNKSTSQGFCFNILCVGETGIGKSTLMDTLFNTKFESD----- 355
N G+VGF +LP+Q+ KS +GF F ++ VGE+G+GKSTL+++LF T +
Sbjct: 11 NPETPGYVGFANLPNQVHRKSVKKGFEFTLMVVGESGLGKSTLINSLFLTDLYPERVIPG 70
Query: 356 PATHNEPGVRLKARSYELQESNVRLKLTIVDTVGFGDQINKDDSYKPIVEYIDAQFEAYL 535
A E V+++A + E++E V+L+LT+VDT G+GD IN D +K I+ YID QFE YL
Sbjct: 71 AAEKIERTVQIEASTVEIEERGVKLRLTVVDTPGYGDAINCRDCFKTIICYIDEQFERYL 130
Query: 536 QEELKIKRSLFNYHDTRIHACLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIAKADTIA 715
+E + R + D R+H C YFI+P GH LK LD+ MK + +KVNI+P+IAKADT+
Sbjct: 131 HDESGLNRR--HIIDNRVHCCFYFISPFGHGLKPLDVAFMKAIHNKVNIVPVIAKADTLT 188
Query: 716 KNELHKFKSKIMSELVSNGVQIYQFP----TDEETVAEINATMSVHLPFAVVGSTEEVKI 883
E + K +I+ E+ + ++IY P ++E E + +PF+VVGS + ++
Sbjct: 189 LKERERLKKRILDEIEEHNIKIYHLPDAESDEDEDFKEQTRLLKASIPFSVVGSNQLIEA 248
Query: 884 GHQMAKARQYPWGVVQVENENH 949
+ + R YPWGVV+VEN H
Sbjct: 249 KGKKVRGRLYPWGVVEVENPEH 270
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 32,374,271
Number of extensions: 817074
Number of successful extensions: 2557
Number of sequences better than 1.0e-05: 14
Number of HSP's gapped: 2527
Number of HSP's successfully gapped: 21
Length of query: 326
Length of database: 17,681,374
Length adjustment: 102
Effective length of query: 224
Effective length of database: 14,306,398
Effective search space: 3204633152
Effective search space used: 3204633152
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-003362
(980 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_535616.2| PREDICTED: similar to Septin-11 [Canis familiar... 512 e-146
Alignment gi|XP_864332.1| PREDICTED: similar to Septin-6 isoform 2 [Canis... 434 e-122
Alignment gi|XP_851778.1| PREDICTED: similar to Septin-6 isoform 1 [Canis... 434 e-122
Alignment gi|XP_864397.1| PREDICTED: similar to septin 6 isoform D isofor... 434 e-122
Alignment gi|XP_864456.1| PREDICTED: similar to Septin-6 isoform 7 [Canis... 434 e-122
Alignment gi|XP_864438.1| PREDICTED: similar to Septin-6 isoform 6 [Canis... 434 e-122
Alignment gi|XP_531903.2| PREDICTED: similar to Septin-8 [Canis familiari... 433 e-122
Alignment gi|XP_864374.1| PREDICTED: similar to Septin-6 isoform 4 [Canis... 425 e-119
Alignment gi|XP_864355.1| PREDICTED: similar to Septin-6 isoform 3 [Canis... 424 e-119
Alignment gi|XP_540501.2| PREDICTED: similar to septin 10 isoform 1 [Cani... 374 e-104
>ref|XP_535616.2| PREDICTED: similar to Septin-11 [Canis familiaris].
Length = 453
Score = 512 bits (1319), Expect(2) = e-146
Identities = 256/258 (99%), Positives = 258/258 (100%)
Frame = +2
Query: 176 NEELRNLSLSGHVGFDSLPDQLVNKSTSQGFCFNILCVGETGIGKSTLMDTLFNTKFESD 355
NEELRNLSLSGHVGFDSLPDQLVNKSTSQGFCFNILCVGETGIGKSTLMDTLFNTKFESD
Sbjct: 34 NEELRNLSLSGHVGFDSLPDQLVNKSTSQGFCFNILCVGETGIGKSTLMDTLFNTKFESD 93
Query: 356 PATHNEPGVRLKARSYELQESNVRLKLTIVDTVGFGDQINKDDSYKPIVEYIDAQFEAYL 535
PATHNEPGVRLKARSYELQESNVRLKLTIVDTVGFGDQINKDDSYKPIVEYIDAQFEAYL
Sbjct: 94 PATHNEPGVRLKARSYELQESNVRLKLTIVDTVGFGDQINKDDSYKPIVEYIDAQFEAYL 153
Query: 536 QEELKIKRSLFNYHDTRIHACLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIAKADTIA 715
QEELKIKRSLFNYHDTRIHACLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIAKADTIA
Sbjct: 154 QEELKIKRSLFNYHDTRIHACLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIAKADTIA 213
Query: 716 KNELHKFKSKIMSELVSNGVQIYQFPTDEETVAEINATMSVHLPFAVVGSTEEVKIGHQM 895
KNELHKFKSKIMSELVSNGVQIYQFPTDEETVAEINATMSVHLPFAVVGSTEEVKIG++M
Sbjct: 214 KNELHKFKSKIMSELVSNGVQIYQFPTDEETVAEINATMSVHLPFAVVGSTEEVKIGNKM 273
Query: 896 AKARQYPWGVVQVENENH 949
AKARQYPWGVVQVENENH
Sbjct: 274 AKARQYPWGVVQVENENH 291
Score = 25.0 bits (53), Expect(2) = e-146
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 949 CDFVKLREML 978
CDFVKLREML
Sbjct: 292 CDFVKLREML 301
>ref|XP_864332.1| PREDICTED: similar to Septin-6 isoform 2 [Canis familiaris].
Length = 470
Score = 434 bits (1117), Expect(2) = e-122
Identities = 212/261 (81%), Positives = 236/261 (90%)
Frame = +2
Query: 167 RPSNEELRNLSLSGHVGFDSLPDQLVNKSTSQGFCFNILCVGETGIGKSTLMDTLFNTKF 346
R E R + L+GHVGFDSLPDQLVNKS SQGFCFNILCVGETG+GKSTLMDTLFNTKF
Sbjct: 8 RQVGEGCRTVPLAGHVGFDSLPDQLVNKSVSQGFCFNILCVGETGLGKSTLMDTLFNTKF 67
Query: 347 ESDPATHNEPGVRLKARSYELQESNVRLKLTIVDTVGFGDQINKDDSYKPIVEYIDAQFE 526
E +PATH +PGV+L++ +Y+LQESNV LKLTIV TVGFGDQINK+DSYKPIVE+IDAQFE
Sbjct: 68 EGEPATHTQPGVQLRSNTYDLQESNVGLKLTIVSTVGFGDQINKEDSYKPIVEFIDAQFE 127
Query: 527 AYLQEELKIKRSLFNYHDTRIHACLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIAKAD 706
AYLQEELKI+R L YHD+RIHACLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIAK+D
Sbjct: 128 AYLQEELKIRRVLHTYHDSRIHACLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIAKSD 187
Query: 707 TIAKNELHKFKSKIMSELVSNGVQIYQFPTDEETVAEINATMSVHLPFAVVGSTEEVKIG 886
I+K+EL KFK KI SELVSNGVQIYQFPTD+E+VAEIN TM+ HLPFAV+GSTEE+KIG
Sbjct: 188 AISKSELTKFKIKITSELVSNGVQIYQFPTDDESVAEINGTMNAHLPFAVIGSTEELKIG 247
Query: 887 HQMAKARQYPWGVVQVENENH 949
++M KARQYPWG VQVENE H
Sbjct: 248 NKMMKARQYPWGTVQVENEAH 268
Score = 25.0 bits (53), Expect(2) = e-122
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 949 CDFVKLREML 978
CDFVKLREML
Sbjct: 269 CDFVKLREML 278
>ref|XP_851778.1| PREDICTED: similar to Septin-6 isoform 1 [Canis familiaris].
Length = 434
Score = 434 bits (1117), Expect(2) = e-122
Identities = 212/261 (81%), Positives = 236/261 (90%)
Frame = +2
Query: 167 RPSNEELRNLSLSGHVGFDSLPDQLVNKSTSQGFCFNILCVGETGIGKSTLMDTLFNTKF 346
R E R + L+GHVGFDSLPDQLVNKS SQGFCFNILCVGETG+GKSTLMDTLFNTKF
Sbjct: 8 RQVGEGCRTVPLAGHVGFDSLPDQLVNKSVSQGFCFNILCVGETGLGKSTLMDTLFNTKF 67
Query: 347 ESDPATHNEPGVRLKARSYELQESNVRLKLTIVDTVGFGDQINKDDSYKPIVEYIDAQFE 526
E +PATH +PGV+L++ +Y+LQESNV LKLTIV TVGFGDQINK+DSYKPIVE+IDAQFE
Sbjct: 68 EGEPATHTQPGVQLRSNTYDLQESNVGLKLTIVSTVGFGDQINKEDSYKPIVEFIDAQFE 127
Query: 527 AYLQEELKIKRSLFNYHDTRIHACLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIAKAD 706
AYLQEELKI+R L YHD+RIHACLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIAK+D
Sbjct: 128 AYLQEELKIRRVLHTYHDSRIHACLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIAKSD 187
Query: 707 TIAKNELHKFKSKIMSELVSNGVQIYQFPTDEETVAEINATMSVHLPFAVVGSTEEVKIG 886
I+K+EL KFK KI SELVSNGVQIYQFPTD+E+VAEIN TM+ HLPFAV+GSTEE+KIG
Sbjct: 188 AISKSELTKFKIKITSELVSNGVQIYQFPTDDESVAEINGTMNAHLPFAVIGSTEELKIG 247
Query: 887 HQMAKARQYPWGVVQVENENH 949
++M KARQYPWG VQVENE H
Sbjct: 248 NKMMKARQYPWGTVQVENEAH 268
Score = 25.0 bits (53), Expect(2) = e-122
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 949 CDFVKLREML 978
CDFVKLREML
Sbjct: 269 CDFVKLREML 278
>ref|XP_864397.1| PREDICTED: similar to septin 6 isoform D isoform 5 [Canis
familiaris].
Length = 429
Score = 434 bits (1117), Expect(2) = e-122
Identities = 212/261 (81%), Positives = 236/261 (90%)
Frame = +2
Query: 167 RPSNEELRNLSLSGHVGFDSLPDQLVNKSTSQGFCFNILCVGETGIGKSTLMDTLFNTKF 346
R E R + L+GHVGFDSLPDQLVNKS SQGFCFNILCVGETG+GKSTLMDTLFNTKF
Sbjct: 8 RQVGEGCRTVPLAGHVGFDSLPDQLVNKSVSQGFCFNILCVGETGLGKSTLMDTLFNTKF 67
Query: 347 ESDPATHNEPGVRLKARSYELQESNVRLKLTIVDTVGFGDQINKDDSYKPIVEYIDAQFE 526
E +PATH +PGV+L++ +Y+LQESNV LKLTIV TVGFGDQINK+DSYKPIVE+IDAQFE
Sbjct: 68 EGEPATHTQPGVQLRSNTYDLQESNVGLKLTIVSTVGFGDQINKEDSYKPIVEFIDAQFE 127
Query: 527 AYLQEELKIKRSLFNYHDTRIHACLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIAKAD 706
AYLQEELKI+R L YHD+RIHACLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIAK+D
Sbjct: 128 AYLQEELKIRRVLHTYHDSRIHACLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIAKSD 187
Query: 707 TIAKNELHKFKSKIMSELVSNGVQIYQFPTDEETVAEINATMSVHLPFAVVGSTEEVKIG 886
I+K+EL KFK KI SELVSNGVQIYQFPTD+E+VAEIN TM+ HLPFAV+GSTEE+KIG
Sbjct: 188 AISKSELTKFKIKITSELVSNGVQIYQFPTDDESVAEINGTMNAHLPFAVIGSTEELKIG 247
Query: 887 HQMAKARQYPWGVVQVENENH 949
++M KARQYPWG VQVENE H
Sbjct: 248 NKMMKARQYPWGTVQVENEAH 268
Score = 25.0 bits (53), Expect(2) = e-122
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 949 CDFVKLREML 978
CDFVKLREML
Sbjct: 269 CDFVKLREML 278
>ref|XP_864456.1| PREDICTED: similar to Septin-6 isoform 7 [Canis familiaris].
Length = 427
Score = 434 bits (1117), Expect(2) = e-122
Identities = 212/261 (81%), Positives = 236/261 (90%)
Frame = +2
Query: 167 RPSNEELRNLSLSGHVGFDSLPDQLVNKSTSQGFCFNILCVGETGIGKSTLMDTLFNTKF 346
R E R + L+GHVGFDSLPDQLVNKS SQGFCFNILCVGETG+GKSTLMDTLFNTKF
Sbjct: 8 RQVGEGCRTVPLAGHVGFDSLPDQLVNKSVSQGFCFNILCVGETGLGKSTLMDTLFNTKF 67
Query: 347 ESDPATHNEPGVRLKARSYELQESNVRLKLTIVDTVGFGDQINKDDSYKPIVEYIDAQFE 526
E +PATH +PGV+L++ +Y+LQESNV LKLTIV TVGFGDQINK+DSYKPIVE+IDAQFE
Sbjct: 68 EGEPATHTQPGVQLRSNTYDLQESNVGLKLTIVSTVGFGDQINKEDSYKPIVEFIDAQFE 127
Query: 527 AYLQEELKIKRSLFNYHDTRIHACLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIAKAD 706
AYLQEELKI+R L YHD+RIHACLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIAK+D
Sbjct: 128 AYLQEELKIRRVLHTYHDSRIHACLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIAKSD 187
Query: 707 TIAKNELHKFKSKIMSELVSNGVQIYQFPTDEETVAEINATMSVHLPFAVVGSTEEVKIG 886
I+K+EL KFK KI SELVSNGVQIYQFPTD+E+VAEIN TM+ HLPFAV+GSTEE+KIG
Sbjct: 188 AISKSELTKFKIKITSELVSNGVQIYQFPTDDESVAEINGTMNAHLPFAVIGSTEELKIG 247
Query: 887 HQMAKARQYPWGVVQVENENH 949
++M KARQYPWG VQVENE H
Sbjct: 248 NKMMKARQYPWGTVQVENEAH 268
Score = 25.0 bits (53), Expect(2) = e-122
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 949 CDFVKLREML 978
CDFVKLREML
Sbjct: 269 CDFVKLREML 278
>ref|XP_864438.1| PREDICTED: similar to Septin-6 isoform 6 [Canis familiaris].
Length = 427
Score = 434 bits (1117), Expect(2) = e-122
Identities = 212/261 (81%), Positives = 236/261 (90%)
Frame = +2
Query: 167 RPSNEELRNLSLSGHVGFDSLPDQLVNKSTSQGFCFNILCVGETGIGKSTLMDTLFNTKF 346
R E R + L+GHVGFDSLPDQLVNKS SQGFCFNILCVGETG+GKSTLMDTLFNTKF
Sbjct: 8 RQVGEGCRTVPLAGHVGFDSLPDQLVNKSVSQGFCFNILCVGETGLGKSTLMDTLFNTKF 67
Query: 347 ESDPATHNEPGVRLKARSYELQESNVRLKLTIVDTVGFGDQINKDDSYKPIVEYIDAQFE 526
E +PATH +PGV+L++ +Y+LQESNV LKLTIV TVGFGDQINK+DSYKPIVE+IDAQFE
Sbjct: 68 EGEPATHTQPGVQLRSNTYDLQESNVGLKLTIVSTVGFGDQINKEDSYKPIVEFIDAQFE 127
Query: 527 AYLQEELKIKRSLFNYHDTRIHACLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIAKAD 706
AYLQEELKI+R L YHD+RIHACLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIAK+D
Sbjct: 128 AYLQEELKIRRVLHTYHDSRIHACLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIAKSD 187
Query: 707 TIAKNELHKFKSKIMSELVSNGVQIYQFPTDEETVAEINATMSVHLPFAVVGSTEEVKIG 886
I+K+EL KFK KI SELVSNGVQIYQFPTD+E+VAEIN TM+ HLPFAV+GSTEE+KIG
Sbjct: 188 AISKSELTKFKIKITSELVSNGVQIYQFPTDDESVAEINGTMNAHLPFAVIGSTEELKIG 247
Query: 887 HQMAKARQYPWGVVQVENENH 949
++M KARQYPWG VQVENE H
Sbjct: 248 NKMMKARQYPWGTVQVENEAH 268
Score = 25.0 bits (53), Expect(2) = e-122
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 949 CDFVKLREML 978
CDFVKLREML
Sbjct: 269 CDFVKLREML 278
>ref|XP_531903.2| PREDICTED: similar to Septin-8 [Canis familiaris].
Length = 531
Score = 433 bits (1113), Expect(2) = e-122
Identities = 211/256 (82%), Positives = 236/256 (92%)
Frame = +2
Query: 182 ELRNLSLSGHVGFDSLPDQLVNKSTSQGFCFNILCVGETGIGKSTLMDTLFNTKFESDPA 361
E RNLSL GHVGFDSLPDQLV+KS +QGF FNILCVGETGIGKSTLM+TLFNT FE++ A
Sbjct: 63 EPRNLSLGGHVGFDSLPDQLVSKSVTQGFSFNILCVGETGIGKSTLMNTLFNTTFETEEA 122
Query: 362 THNEPGVRLKARSYELQESNVRLKLTIVDTVGFGDQINKDDSYKPIVEYIDAQFEAYLQE 541
+H+E VRL+ ++Y+LQESNV LKLTIVD VGFGDQINKD+SY+PIV+YIDAQFE YLQE
Sbjct: 123 SHHEECVRLRPQTYDLQESNVHLKLTIVDAVGFGDQINKDESYRPIVDYIDAQFENYLQE 182
Query: 542 ELKIKRSLFNYHDTRIHACLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIAKADTIAKN 721
ELKI+RSLF+YHDTRIH CLYFI PTGHSLKSLDLVTMKKLDSKVNIIPIIAKADTI+K+
Sbjct: 183 ELKIRRSLFDYHDTRIHVCLYFITPTGHSLKSLDLVTMKKLDSKVNIIPIIAKADTISKS 242
Query: 722 ELHKFKSKIMSELVSNGVQIYQFPTDEETVAEINATMSVHLPFAVVGSTEEVKIGHQMAK 901
ELHKFK KIM ELVSNGVQIYQFPTD+E VAEINA M+ HLPFAVVGSTEEVK+G+++ +
Sbjct: 243 ELHKFKIKIMGELVSNGVQIYQFPTDDEAVAEINAVMNAHLPFAVVGSTEEVKVGNKLVR 302
Query: 902 ARQYPWGVVQVENENH 949
ARQYPWGVVQVENENH
Sbjct: 303 ARQYPWGVVQVENENH 318
Score = 25.0 bits (53), Expect(2) = e-122
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 949 CDFVKLREML 978
CDFVKLREML
Sbjct: 319 CDFVKLREML 328
>ref|XP_864374.1| PREDICTED: similar to Septin-6 isoform 4 [Canis familiaris].
Length = 284
Score = 425 bits (1093), Expect = e-119
Identities = 208/257 (80%), Positives = 232/257 (90%)
Frame = +2
Query: 167 RPSNEELRNLSLSGHVGFDSLPDQLVNKSTSQGFCFNILCVGETGIGKSTLMDTLFNTKF 346
R E R + L+GHVGFDSLPDQLVNKS SQGFCFNILCVGETG+GKSTLMDTLFNTKF
Sbjct: 8 RQVGEGCRTVPLAGHVGFDSLPDQLVNKSVSQGFCFNILCVGETGLGKSTLMDTLFNTKF 67
Query: 347 ESDPATHNEPGVRLKARSYELQESNVRLKLTIVDTVGFGDQINKDDSYKPIVEYIDAQFE 526
E +PATH +PGV+L++ +Y+LQESNV LKLTIV TVGFGDQINK+DSYKPIVE+IDAQFE
Sbjct: 68 EGEPATHTQPGVQLRSNTYDLQESNVGLKLTIVSTVGFGDQINKEDSYKPIVEFIDAQFE 127
Query: 527 AYLQEELKIKRSLFNYHDTRIHACLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIAKAD 706
AYLQEELKI+R L YHD+RIHACLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIAK+D
Sbjct: 128 AYLQEELKIRRVLHTYHDSRIHACLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIAKSD 187
Query: 707 TIAKNELHKFKSKIMSELVSNGVQIYQFPTDEETVAEINATMSVHLPFAVVGSTEEVKIG 886
I+K+EL KFK KI SELVSNGVQIYQFPTD+E+VAEIN TM+ HLPFAV+GSTEE+KIG
Sbjct: 188 AISKSELTKFKIKITSELVSNGVQIYQFPTDDESVAEINGTMNAHLPFAVIGSTEELKIG 247
Query: 887 HQMAKARQYPWGVVQVE 937
++M KARQYPWG VQ E
Sbjct: 248 NKMMKARQYPWGTVQGE 264
>ref|XP_864355.1| PREDICTED: similar to Septin-6 isoform 3 [Canis familiaris].
Length = 264
Score = 424 bits (1091), Expect = e-119
Identities = 207/255 (81%), Positives = 231/255 (90%)
Frame = +2
Query: 167 RPSNEELRNLSLSGHVGFDSLPDQLVNKSTSQGFCFNILCVGETGIGKSTLMDTLFNTKF 346
R E R + L+GHVGFDSLPDQLVNKS SQGFCFNILCVGETG+GKSTLMDTLFNTKF
Sbjct: 8 RQVGEGCRTVPLAGHVGFDSLPDQLVNKSVSQGFCFNILCVGETGLGKSTLMDTLFNTKF 67
Query: 347 ESDPATHNEPGVRLKARSYELQESNVRLKLTIVDTVGFGDQINKDDSYKPIVEYIDAQFE 526
E +PATH +PGV+L++ +Y+LQESNV LKLTIV TVGFGDQINK+DSYKPIVE+IDAQFE
Sbjct: 68 EGEPATHTQPGVQLRSNTYDLQESNVGLKLTIVSTVGFGDQINKEDSYKPIVEFIDAQFE 127
Query: 527 AYLQEELKIKRSLFNYHDTRIHACLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIAKAD 706
AYLQEELKI+R L YHD+RIHACLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIAK+D
Sbjct: 128 AYLQEELKIRRVLHTYHDSRIHACLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIAKSD 187
Query: 707 TIAKNELHKFKSKIMSELVSNGVQIYQFPTDEETVAEINATMSVHLPFAVVGSTEEVKIG 886
I+K+EL KFK KI SELVSNGVQIYQFPTD+E+VAEIN TM+ HLPFAV+GSTEE+KIG
Sbjct: 188 AISKSELTKFKIKITSELVSNGVQIYQFPTDDESVAEINGTMNAHLPFAVIGSTEELKIG 247
Query: 887 HQMAKARQYPWGVVQ 931
++M KARQYPWG VQ
Sbjct: 248 NKMMKARQYPWGTVQ 262
>ref|XP_540501.2| PREDICTED: similar to septin 10 isoform 1 [Canis familiaris].
Length = 432
Score = 374 bits (961), Expect(2) = e-104
Identities = 178/257 (69%), Positives = 219/257 (85%)
Frame = +2
Query: 179 EELRNLSLSGHVGFDSLPDQLVNKSTSQGFCFNILCVGETGIGKSTLMDTLFNTKFESDP 358
+ +R L++ GH GF+ LP QLVN+S QGF FNILCVGETGIGKSTL+DTLFNT +
Sbjct: 22 DSVRCLTMLGHFGFECLPHQLVNRSIQQGFSFNILCVGETGIGKSTLIDTLFNTNLKDKK 81
Query: 359 ATHNEPGVRLKARSYELQESNVRLKLTIVDTVGFGDQINKDDSYKPIVEYIDAQFEAYLQ 538
++H V LK ++YELQE+NV+LKLT+V TVG+GDQINK+ SY+PIV+Y+DAQFEAYLQ
Sbjct: 82 SSHFYSNVGLKIQTYELQENNVQLKLTVVRTVGYGDQINKEASYQPIVDYVDAQFEAYLQ 141
Query: 539 EELKIKRSLFNYHDTRIHACLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIAKADTIAK 718
EELKIKRS +YHD+RIH CLYFI+PTGHSLKSLDL+TMK +DSKVNI+P+IAKADTI+K
Sbjct: 142 EELKIKRSFTDYHDSRIHVCLYFISPTGHSLKSLDLLTMKNIDSKVNIVPLIAKADTISK 201
Query: 719 NELHKFKSKIMSELVSNGVQIYQFPTDEETVAEINATMSVHLPFAVVGSTEEVKIGHQMA 898
+L KFK KIM+ELVSNG+QIYQFPTD+E A+ N++M+ LPFAVVGS +EVK+G +M
Sbjct: 202 YDLQKFKCKIMTELVSNGIQIYQFPTDDEPTAQANSSMNGQLPFAVVGSMDEVKVGKRMV 261
Query: 899 KARQYPWGVVQVENENH 949
+ RQYPWGV+QVENENH
Sbjct: 262 RGRQYPWGVLQVENENH 278
Score = 23.5 bits (49), Expect(2) = e-104
Identities = 8/10 (80%), Positives = 10/10 (100%)
Frame = +1
Query: 949 CDFVKLREML 978
CDF+KLR+ML
Sbjct: 279 CDFIKLRDML 288
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 33,874,071
Number of extensions: 846536
Number of successful extensions: 2768
Number of sequences better than 1.0e-05: 27
Number of HSP's gapped: 2726
Number of HSP's successfully gapped: 39
Length of query: 326
Length of database: 18,874,504
Length adjustment: 103
Effective length of query: 223
Effective length of database: 15,440,896
Effective search space: 3443319808
Effective search space used: 3443319808
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-003362
(980 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_060713.1| septin-11 [Homo sapiens]. 518 e-148
Alignment gi|NP_055944.2| septin-6 isoform B [Homo sapiens]. 435 e-123
Alignment gi|NP_665801.1| septin-6 isoform D [Homo sapiens]. 435 e-123
Alignment gi|NP_665799.1| septin-6 isoform A [Homo sapiens]. 435 e-123
Alignment gi|NP_665798.1| septin-6 isoform A [Homo sapiens]. 435 e-123
Alignment gi|NP_001092281.1| septin-8 isoform a [Homo sapiens]. 431 e-122
Alignment gi|NP_001092282.1| septin-8 isoform c [Homo sapiens]. 431 e-122
Alignment gi|NP_055961.1| septin-8 isoform b [Homo sapiens]. 431 e-122
Alignment gi|NP_653311.1| septin-10 isoform 1 [Homo sapiens]. 420 e-118
Alignment gi|NP_848699.1| septin-10 isoform 2 [Homo sapiens]. 420 e-118
>ref|NP_060713.1| septin-11 [Homo sapiens].
Length = 429
Score = 518 bits (1335), Expect(2) = e-148
Identities = 259/261 (99%), Positives = 261/261 (100%)
Frame = +2
Query: 167 RPSNEELRNLSLSGHVGFDSLPDQLVNKSTSQGFCFNILCVGETGIGKSTLMDTLFNTKF 346
RPSNEELRNLSLSGHVGFDSLPDQLVNKSTSQGFCFNILCVGETGIGKSTLMDTLFNTKF
Sbjct: 7 RPSNEELRNLSLSGHVGFDSLPDQLVNKSTSQGFCFNILCVGETGIGKSTLMDTLFNTKF 66
Query: 347 ESDPATHNEPGVRLKARSYELQESNVRLKLTIVDTVGFGDQINKDDSYKPIVEYIDAQFE 526
ESDPATHNEPGVRLKARSYELQESNVRLKLTIVDTVGFGDQINKDDSYKPIVEYIDAQFE
Sbjct: 67 ESDPATHNEPGVRLKARSYELQESNVRLKLTIVDTVGFGDQINKDDSYKPIVEYIDAQFE 126
Query: 527 AYLQEELKIKRSLFNYHDTRIHACLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIAKAD 706
AYLQEELKIKRSLFNYHDTRIHACLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIAKAD
Sbjct: 127 AYLQEELKIKRSLFNYHDTRIHACLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIAKAD 186
Query: 707 TIAKNELHKFKSKIMSELVSNGVQIYQFPTDEETVAEINATMSVHLPFAVVGSTEEVKIG 886
TIAKNELHKFKSKIMSELVSNGVQIYQFPTDEETVAEINATMSVHLPFAVVGSTEEVKIG
Sbjct: 187 TIAKNELHKFKSKIMSELVSNGVQIYQFPTDEETVAEINATMSVHLPFAVVGSTEEVKIG 246
Query: 887 HQMAKARQYPWGVVQVENENH 949
++MAKARQYPWGVVQVENENH
Sbjct: 247 NKMAKARQYPWGVVQVENENH 267
Score = 25.0 bits (53), Expect(2) = e-148
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 949 CDFVKLREML 978
CDFVKLREML
Sbjct: 268 CDFVKLREML 277
>ref|NP_055944.2| septin-6 isoform B [Homo sapiens].
Length = 434
Score = 435 bits (1119), Expect(2) = e-123
Identities = 212/261 (81%), Positives = 236/261 (90%)
Frame = +2
Query: 167 RPSNEELRNLSLSGHVGFDSLPDQLVNKSTSQGFCFNILCVGETGIGKSTLMDTLFNTKF 346
R E R + L+GHVGFDSLPDQLVNKS SQGFCFNILCVGETG+GKSTLMDTLFNTKF
Sbjct: 8 RQVGEGCRTVPLAGHVGFDSLPDQLVNKSVSQGFCFNILCVGETGLGKSTLMDTLFNTKF 67
Query: 347 ESDPATHNEPGVRLKARSYELQESNVRLKLTIVDTVGFGDQINKDDSYKPIVEYIDAQFE 526
E +PATH +PGV+L++ +Y+LQESNVRLKLTIV TVGFGDQINK+DSYKPIVE+IDAQFE
Sbjct: 68 EGEPATHTQPGVQLQSNTYDLQESNVRLKLTIVSTVGFGDQINKEDSYKPIVEFIDAQFE 127
Query: 527 AYLQEELKIKRSLFNYHDTRIHACLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIAKAD 706
AYLQEELKI+R L YHD+RIH CLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIAKAD
Sbjct: 128 AYLQEELKIRRVLHTYHDSRIHVCLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIAKAD 187
Query: 707 TIAKNELHKFKSKIMSELVSNGVQIYQFPTDEETVAEINATMSVHLPFAVVGSTEEVKIG 886
I+K+EL KFK KI SELVSNGVQIYQFPTD+E+VAEIN TM+ HLPFAV+GSTEE+KIG
Sbjct: 188 AISKSELTKFKIKITSELVSNGVQIYQFPTDDESVAEINGTMNAHLPFAVIGSTEELKIG 247
Query: 887 HQMAKARQYPWGVVQVENENH 949
++M +ARQYPWG VQVENE H
Sbjct: 248 NKMMRARQYPWGTVQVENEAH 268
Score = 25.0 bits (53), Expect(2) = e-123
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 949 CDFVKLREML 978
CDFVKLREML
Sbjct: 269 CDFVKLREML 278
>ref|NP_665801.1| septin-6 isoform D [Homo sapiens].
Length = 429
Score = 435 bits (1119), Expect(2) = e-123
Identities = 212/261 (81%), Positives = 236/261 (90%)
Frame = +2
Query: 167 RPSNEELRNLSLSGHVGFDSLPDQLVNKSTSQGFCFNILCVGETGIGKSTLMDTLFNTKF 346
R E R + L+GHVGFDSLPDQLVNKS SQGFCFNILCVGETG+GKSTLMDTLFNTKF
Sbjct: 8 RQVGEGCRTVPLAGHVGFDSLPDQLVNKSVSQGFCFNILCVGETGLGKSTLMDTLFNTKF 67
Query: 347 ESDPATHNEPGVRLKARSYELQESNVRLKLTIVDTVGFGDQINKDDSYKPIVEYIDAQFE 526
E +PATH +PGV+L++ +Y+LQESNVRLKLTIV TVGFGDQINK+DSYKPIVE+IDAQFE
Sbjct: 68 EGEPATHTQPGVQLQSNTYDLQESNVRLKLTIVSTVGFGDQINKEDSYKPIVEFIDAQFE 127
Query: 527 AYLQEELKIKRSLFNYHDTRIHACLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIAKAD 706
AYLQEELKI+R L YHD+RIH CLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIAKAD
Sbjct: 128 AYLQEELKIRRVLHTYHDSRIHVCLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIAKAD 187
Query: 707 TIAKNELHKFKSKIMSELVSNGVQIYQFPTDEETVAEINATMSVHLPFAVVGSTEEVKIG 886
I+K+EL KFK KI SELVSNGVQIYQFPTD+E+VAEIN TM+ HLPFAV+GSTEE+KIG
Sbjct: 188 AISKSELTKFKIKITSELVSNGVQIYQFPTDDESVAEINGTMNAHLPFAVIGSTEELKIG 247
Query: 887 HQMAKARQYPWGVVQVENENH 949
++M +ARQYPWG VQVENE H
Sbjct: 248 NKMMRARQYPWGTVQVENEAH 268
Score = 25.0 bits (53), Expect(2) = e-123
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 949 CDFVKLREML 978
CDFVKLREML
Sbjct: 269 CDFVKLREML 278
>ref|NP_665799.1| septin-6 isoform A [Homo sapiens].
Length = 427
Score = 435 bits (1119), Expect(2) = e-123
Identities = 212/261 (81%), Positives = 236/261 (90%)
Frame = +2
Query: 167 RPSNEELRNLSLSGHVGFDSLPDQLVNKSTSQGFCFNILCVGETGIGKSTLMDTLFNTKF 346
R E R + L+GHVGFDSLPDQLVNKS SQGFCFNILCVGETG+GKSTLMDTLFNTKF
Sbjct: 8 RQVGEGCRTVPLAGHVGFDSLPDQLVNKSVSQGFCFNILCVGETGLGKSTLMDTLFNTKF 67
Query: 347 ESDPATHNEPGVRLKARSYELQESNVRLKLTIVDTVGFGDQINKDDSYKPIVEYIDAQFE 526
E +PATH +PGV+L++ +Y+LQESNVRLKLTIV TVGFGDQINK+DSYKPIVE+IDAQFE
Sbjct: 68 EGEPATHTQPGVQLQSNTYDLQESNVRLKLTIVSTVGFGDQINKEDSYKPIVEFIDAQFE 127
Query: 527 AYLQEELKIKRSLFNYHDTRIHACLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIAKAD 706
AYLQEELKI+R L YHD+RIH CLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIAKAD
Sbjct: 128 AYLQEELKIRRVLHTYHDSRIHVCLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIAKAD 187
Query: 707 TIAKNELHKFKSKIMSELVSNGVQIYQFPTDEETVAEINATMSVHLPFAVVGSTEEVKIG 886
I+K+EL KFK KI SELVSNGVQIYQFPTD+E+VAEIN TM+ HLPFAV+GSTEE+KIG
Sbjct: 188 AISKSELTKFKIKITSELVSNGVQIYQFPTDDESVAEINGTMNAHLPFAVIGSTEELKIG 247
Query: 887 HQMAKARQYPWGVVQVENENH 949
++M +ARQYPWG VQVENE H
Sbjct: 248 NKMMRARQYPWGTVQVENEAH 268
Score = 25.0 bits (53), Expect(2) = e-123
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 949 CDFVKLREML 978
CDFVKLREML
Sbjct: 269 CDFVKLREML 278
>ref|NP_665798.1| septin-6 isoform A [Homo sapiens].
Length = 427
Score = 435 bits (1119), Expect(2) = e-123
Identities = 212/261 (81%), Positives = 236/261 (90%)
Frame = +2
Query: 167 RPSNEELRNLSLSGHVGFDSLPDQLVNKSTSQGFCFNILCVGETGIGKSTLMDTLFNTKF 346
R E R + L+GHVGFDSLPDQLVNKS SQGFCFNILCVGETG+GKSTLMDTLFNTKF
Sbjct: 8 RQVGEGCRTVPLAGHVGFDSLPDQLVNKSVSQGFCFNILCVGETGLGKSTLMDTLFNTKF 67
Query: 347 ESDPATHNEPGVRLKARSYELQESNVRLKLTIVDTVGFGDQINKDDSYKPIVEYIDAQFE 526
E +PATH +PGV+L++ +Y+LQESNVRLKLTIV TVGFGDQINK+DSYKPIVE+IDAQFE
Sbjct: 68 EGEPATHTQPGVQLQSNTYDLQESNVRLKLTIVSTVGFGDQINKEDSYKPIVEFIDAQFE 127
Query: 527 AYLQEELKIKRSLFNYHDTRIHACLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIAKAD 706
AYLQEELKI+R L YHD+RIH CLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIAKAD
Sbjct: 128 AYLQEELKIRRVLHTYHDSRIHVCLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIAKAD 187
Query: 707 TIAKNELHKFKSKIMSELVSNGVQIYQFPTDEETVAEINATMSVHLPFAVVGSTEEVKIG 886
I+K+EL KFK KI SELVSNGVQIYQFPTD+E+VAEIN TM+ HLPFAV+GSTEE+KIG
Sbjct: 188 AISKSELTKFKIKITSELVSNGVQIYQFPTDDESVAEINGTMNAHLPFAVIGSTEELKIG 247
Query: 887 HQMAKARQYPWGVVQVENENH 949
++M +ARQYPWG VQVENE H
Sbjct: 248 NKMMRARQYPWGTVQVENEAH 268
Score = 25.0 bits (53), Expect(2) = e-123
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 949 CDFVKLREML 978
CDFVKLREML
Sbjct: 269 CDFVKLREML 278
>ref|NP_001092281.1| septin-8 isoform a [Homo sapiens].
Length = 483
Score = 431 bits (1109), Expect(2) = e-122
Identities = 210/256 (82%), Positives = 237/256 (92%)
Frame = +2
Query: 182 ELRNLSLSGHVGFDSLPDQLVNKSTSQGFCFNILCVGETGIGKSTLMDTLFNTKFESDPA 361
E R+LSL GHVGFDSLPDQLV+KS +QGF FNILCVGETGIGKSTLM+TLFNT FE++ A
Sbjct: 15 EPRSLSLGGHVGFDSLPDQLVSKSVTQGFSFNILCVGETGIGKSTLMNTLFNTTFETEEA 74
Query: 362 THNEPGVRLKARSYELQESNVRLKLTIVDTVGFGDQINKDDSYKPIVEYIDAQFEAYLQE 541
+H+E VRL+ ++Y+LQESNV+LKLTIVD VGFGDQINKD+SY+PIV+YIDAQFE YLQE
Sbjct: 75 SHHEACVRLRPQTYDLQESNVQLKLTIVDAVGFGDQINKDESYRPIVDYIDAQFENYLQE 134
Query: 542 ELKIKRSLFNYHDTRIHACLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIAKADTIAKN 721
ELKI+RSLF+YHDTRIH CLYFI PTGHSLKSLDLVTMKKLDSKVNIIPIIAKADTI+K+
Sbjct: 135 ELKIRRSLFDYHDTRIHVCLYFITPTGHSLKSLDLVTMKKLDSKVNIIPIIAKADTISKS 194
Query: 722 ELHKFKSKIMSELVSNGVQIYQFPTDEETVAEINATMSVHLPFAVVGSTEEVKIGHQMAK 901
ELHKFK KIM ELVSNGVQIYQFPTD+E VAEINA M+ HLPFAVVGSTEEVK+G+++ +
Sbjct: 195 ELHKFKIKIMGELVSNGVQIYQFPTDDEAVAEINAVMNAHLPFAVVGSTEEVKVGNKLVR 254
Query: 902 ARQYPWGVVQVENENH 949
ARQYPWGVVQVENENH
Sbjct: 255 ARQYPWGVVQVENENH 270
Score = 25.0 bits (53), Expect(2) = e-122
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 949 CDFVKLREML 978
CDFVKLREML
Sbjct: 271 CDFVKLREML 280
>ref|NP_001092282.1| septin-8 isoform c [Homo sapiens].
Length = 442
Score = 431 bits (1109), Expect(2) = e-122
Identities = 210/256 (82%), Positives = 237/256 (92%)
Frame = +2
Query: 182 ELRNLSLSGHVGFDSLPDQLVNKSTSQGFCFNILCVGETGIGKSTLMDTLFNTKFESDPA 361
E R+LSL GHVGFDSLPDQLV+KS +QGF FNILCVGETGIGKSTLM+TLFNT FE++ A
Sbjct: 15 EPRSLSLGGHVGFDSLPDQLVSKSVTQGFSFNILCVGETGIGKSTLMNTLFNTTFETEEA 74
Query: 362 THNEPGVRLKARSYELQESNVRLKLTIVDTVGFGDQINKDDSYKPIVEYIDAQFEAYLQE 541
+H+E VRL+ ++Y+LQESNV+LKLTIVD VGFGDQINKD+SY+PIV+YIDAQFE YLQE
Sbjct: 75 SHHEACVRLRPQTYDLQESNVQLKLTIVDAVGFGDQINKDESYRPIVDYIDAQFENYLQE 134
Query: 542 ELKIKRSLFNYHDTRIHACLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIAKADTIAKN 721
ELKI+RSLF+YHDTRIH CLYFI PTGHSLKSLDLVTMKKLDSKVNIIPIIAKADTI+K+
Sbjct: 135 ELKIRRSLFDYHDTRIHVCLYFITPTGHSLKSLDLVTMKKLDSKVNIIPIIAKADTISKS 194
Query: 722 ELHKFKSKIMSELVSNGVQIYQFPTDEETVAEINATMSVHLPFAVVGSTEEVKIGHQMAK 901
ELHKFK KIM ELVSNGVQIYQFPTD+E VAEINA M+ HLPFAVVGSTEEVK+G+++ +
Sbjct: 195 ELHKFKIKIMGELVSNGVQIYQFPTDDEAVAEINAVMNAHLPFAVVGSTEEVKVGNKLVR 254
Query: 902 ARQYPWGVVQVENENH 949
ARQYPWGVVQVENENH
Sbjct: 255 ARQYPWGVVQVENENH 270
Score = 25.0 bits (53), Expect(2) = e-122
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 949 CDFVKLREML 978
CDFVKLREML
Sbjct: 271 CDFVKLREML 280
>ref|NP_055961.1| septin-8 isoform b [Homo sapiens].
Length = 429
Score = 431 bits (1109), Expect(2) = e-122
Identities = 210/256 (82%), Positives = 237/256 (92%)
Frame = +2
Query: 182 ELRNLSLSGHVGFDSLPDQLVNKSTSQGFCFNILCVGETGIGKSTLMDTLFNTKFESDPA 361
E R+LSL GHVGFDSLPDQLV+KS +QGF FNILCVGETGIGKSTLM+TLFNT FE++ A
Sbjct: 15 EPRSLSLGGHVGFDSLPDQLVSKSVTQGFSFNILCVGETGIGKSTLMNTLFNTTFETEEA 74
Query: 362 THNEPGVRLKARSYELQESNVRLKLTIVDTVGFGDQINKDDSYKPIVEYIDAQFEAYLQE 541
+H+E VRL+ ++Y+LQESNV+LKLTIVD VGFGDQINKD+SY+PIV+YIDAQFE YLQE
Sbjct: 75 SHHEACVRLRPQTYDLQESNVQLKLTIVDAVGFGDQINKDESYRPIVDYIDAQFENYLQE 134
Query: 542 ELKIKRSLFNYHDTRIHACLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIAKADTIAKN 721
ELKI+RSLF+YHDTRIH CLYFI PTGHSLKSLDLVTMKKLDSKVNIIPIIAKADTI+K+
Sbjct: 135 ELKIRRSLFDYHDTRIHVCLYFITPTGHSLKSLDLVTMKKLDSKVNIIPIIAKADTISKS 194
Query: 722 ELHKFKSKIMSELVSNGVQIYQFPTDEETVAEINATMSVHLPFAVVGSTEEVKIGHQMAK 901
ELHKFK KIM ELVSNGVQIYQFPTD+E VAEINA M+ HLPFAVVGSTEEVK+G+++ +
Sbjct: 195 ELHKFKIKIMGELVSNGVQIYQFPTDDEAVAEINAVMNAHLPFAVVGSTEEVKVGNKLVR 254
Query: 902 ARQYPWGVVQVENENH 949
ARQYPWGVVQVENENH
Sbjct: 255 ARQYPWGVVQVENENH 270
Score = 25.0 bits (53), Expect(2) = e-122
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 949 CDFVKLREML 978
CDFVKLREML
Sbjct: 271 CDFVKLREML 280
>ref|NP_653311.1| septin-10 isoform 1 [Homo sapiens].
Length = 454
Score = 420 bits (1080), Expect(2) = e-118
Identities = 200/257 (77%), Positives = 236/257 (91%)
Frame = +2
Query: 179 EELRNLSLSGHVGFDSLPDQLVNKSTSQGFCFNILCVGETGIGKSTLMDTLFNTKFESDP 358
E +R+L++SGHVGF+SLPDQLVN+S QGFCFNILCVGETGIGKSTL+DTLFNT FE
Sbjct: 36 ENIRSLTMSGHVGFESLPDQLVNRSIQQGFCFNILCVGETGIGKSTLIDTLFNTNFEDYE 95
Query: 359 ATHNEPGVRLKARSYELQESNVRLKLTIVDTVGFGDQINKDDSYKPIVEYIDAQFEAYLQ 538
++H P V+LKA++YELQESNV+LKLTIV+TVGFGDQINK++SY+PIV+YIDAQFEAYLQ
Sbjct: 96 SSHFCPNVKLKAQTYELQESNVQLKLTIVNTVGFGDQINKEESYQPIVDYIDAQFEAYLQ 155
Query: 539 EELKIKRSLFNYHDTRIHACLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIAKADTIAK 718
EELKIKRSLF YHD+RIH CLYFI+PTGHSLK+LDL+TMK LDSKVNIIP+IAKADT++K
Sbjct: 156 EELKIKRSLFTYHDSRIHVCLYFISPTGHSLKTLDLLTMKNLDSKVNIIPVIAKADTVSK 215
Query: 719 NELHKFKSKIMSELVSNGVQIYQFPTDEETVAEINATMSVHLPFAVVGSTEEVKIGHQMA 898
EL KFK K+MSELVSNGVQIYQFPTD++T+A++NA M+ LPFAVVGS +EVK+G++M
Sbjct: 216 TELQKFKIKLMSELVSNGVQIYQFPTDDDTIAKVNAAMNGQLPFAVVGSMDEVKVGNKMV 275
Query: 899 KARQYPWGVVQVENENH 949
KARQYPWGVVQVENENH
Sbjct: 276 KARQYPWGVVQVENENH 292
Score = 25.0 bits (53), Expect(2) = e-118
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 949 CDFVKLREML 978
CDFVKLREML
Sbjct: 293 CDFVKLREML 302
>ref|NP_848699.1| septin-10 isoform 2 [Homo sapiens].
Length = 431
Score = 420 bits (1080), Expect(2) = e-118
Identities = 200/257 (77%), Positives = 236/257 (91%)
Frame = +2
Query: 179 EELRNLSLSGHVGFDSLPDQLVNKSTSQGFCFNILCVGETGIGKSTLMDTLFNTKFESDP 358
E +R+L++SGHVGF+SLPDQLVN+S QGFCFNILCVGETGIGKSTL+DTLFNT FE
Sbjct: 13 ENIRSLTMSGHVGFESLPDQLVNRSIQQGFCFNILCVGETGIGKSTLIDTLFNTNFEDYE 72
Query: 359 ATHNEPGVRLKARSYELQESNVRLKLTIVDTVGFGDQINKDDSYKPIVEYIDAQFEAYLQ 538
++H P V+LKA++YELQESNV+LKLTIV+TVGFGDQINK++SY+PIV+YIDAQFEAYLQ
Sbjct: 73 SSHFCPNVKLKAQTYELQESNVQLKLTIVNTVGFGDQINKEESYQPIVDYIDAQFEAYLQ 132
Query: 539 EELKIKRSLFNYHDTRIHACLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIAKADTIAK 718
EELKIKRSLF YHD+RIH CLYFI+PTGHSLK+LDL+TMK LDSKVNIIP+IAKADT++K
Sbjct: 133 EELKIKRSLFTYHDSRIHVCLYFISPTGHSLKTLDLLTMKNLDSKVNIIPVIAKADTVSK 192
Query: 719 NELHKFKSKIMSELVSNGVQIYQFPTDEETVAEINATMSVHLPFAVVGSTEEVKIGHQMA 898
EL KFK K+MSELVSNGVQIYQFPTD++T+A++NA M+ LPFAVVGS +EVK+G++M
Sbjct: 193 TELQKFKIKLMSELVSNGVQIYQFPTDDDTIAKVNAAMNGQLPFAVVGSMDEVKVGNKMV 252
Query: 899 KARQYPWGVVQVENENH 949
KARQYPWGVVQVENENH
Sbjct: 253 KARQYPWGVVQVENENH 269
Score = 25.0 bits (53), Expect(2) = e-118
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 949 CDFVKLREML 978
CDFVKLREML
Sbjct: 270 CDFVKLREML 279
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 33,259,341
Number of extensions: 831968
Number of successful extensions: 2661
Number of sequences better than 1.0e-05: 37
Number of HSP's gapped: 2587
Number of HSP's successfully gapped: 54
Length of query: 326
Length of database: 18,297,164
Length adjustment: 103
Effective length of query: 223
Effective length of database: 14,901,872
Effective search space: 3323117456
Effective search space used: 3323117456
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-003362
(980 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001009818.1| septin-11 [Mus musculus]. 518 e-148
Alignment gi|NP_001170795.1| septin-6 isoform 1 [Mus musculus]. 433 e-122
Alignment gi|NP_064326.2| septin-6 isoform 2 [Mus musculus]. 433 e-122
Alignment gi|NP_149156.1| septin-8 [Mus musculus]. 432 e-122
Alignment gi|NP_001170794.1| septin-6 isoform 3 [Mus musculus]. 432 e-122
Alignment gi|NP_001020081.2| septin-10 isoform 1 [Mus musculus]. 407 e-114
Alignment gi|NP_001020082.1| septin-10 isoform 2 [Mus musculus]. 407 e-114
Alignment gi|NP_083102.1| septin-14 [Mus musculus]. 350 1e-96
Alignment gi|NP_036019.2| neuronal-specific septin-3 [Mus musculus]. 224 8e-59
Alignment gi|NP_001192296.1| septin-7 isoform 2 [Mus musculus]. 222 4e-58
>ref|NP_001009818.1| septin-11 [Mus musculus].
Length = 429
Score = 518 bits (1335), Expect(2) = e-148
Identities = 259/261 (99%), Positives = 261/261 (100%)
Frame = +2
Query: 167 RPSNEELRNLSLSGHVGFDSLPDQLVNKSTSQGFCFNILCVGETGIGKSTLMDTLFNTKF 346
RPSNEELRNLSLSGHVGFDSLPDQLVNKSTSQGFCFNILCVGETGIGKSTLMDTLFNTKF
Sbjct: 7 RPSNEELRNLSLSGHVGFDSLPDQLVNKSTSQGFCFNILCVGETGIGKSTLMDTLFNTKF 66
Query: 347 ESDPATHNEPGVRLKARSYELQESNVRLKLTIVDTVGFGDQINKDDSYKPIVEYIDAQFE 526
ESDPATHNEPGVRLKARSYELQESNVRLKLTIVDTVGFGDQINKDDSYKPIVEYIDAQFE
Sbjct: 67 ESDPATHNEPGVRLKARSYELQESNVRLKLTIVDTVGFGDQINKDDSYKPIVEYIDAQFE 126
Query: 527 AYLQEELKIKRSLFNYHDTRIHACLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIAKAD 706
AYLQEELKIKRSLFNYHDTRIHACLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIAKAD
Sbjct: 127 AYLQEELKIKRSLFNYHDTRIHACLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIAKAD 186
Query: 707 TIAKNELHKFKSKIMSELVSNGVQIYQFPTDEETVAEINATMSVHLPFAVVGSTEEVKIG 886
TIAKNELHKFKSKIMSELVSNGVQIYQFPTDEETVAEINATMSVHLPFAVVGSTEEVKIG
Sbjct: 187 TIAKNELHKFKSKIMSELVSNGVQIYQFPTDEETVAEINATMSVHLPFAVVGSTEEVKIG 246
Query: 887 HQMAKARQYPWGVVQVENENH 949
++MAKARQYPWGVVQVENENH
Sbjct: 247 NKMAKARQYPWGVVQVENENH 267
Score = 25.0 bits (53), Expect(2) = e-148
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 949 CDFVKLREML 978
CDFVKLREML
Sbjct: 268 CDFVKLREML 277
>ref|NP_001170795.1| septin-6 isoform 1 [Mus musculus].
Length = 434
Score = 433 bits (1114), Expect(2) = e-122
Identities = 210/261 (80%), Positives = 237/261 (90%)
Frame = +2
Query: 167 RPSNEELRNLSLSGHVGFDSLPDQLVNKSTSQGFCFNILCVGETGIGKSTLMDTLFNTKF 346
R E+ R + L+GHVGFDSLPDQLVNKS SQGFCFNILCVGETG+GKSTLMDTLFNTKF
Sbjct: 8 RQVGEDCRTVPLAGHVGFDSLPDQLVNKSVSQGFCFNILCVGETGLGKSTLMDTLFNTKF 67
Query: 347 ESDPATHNEPGVRLKARSYELQESNVRLKLTIVDTVGFGDQINKDDSYKPIVEYIDAQFE 526
E +PATH +PGV+L++ +Y+LQESNV LKLTIV TVGFGDQINK+DSYKPIVE+IDAQFE
Sbjct: 68 EGEPATHTQPGVQLQSNTYDLQESNVGLKLTIVSTVGFGDQINKEDSYKPIVEFIDAQFE 127
Query: 527 AYLQEELKIKRSLFNYHDTRIHACLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIAKAD 706
AYLQEELKI+R L +YHD+RIH CLYFIAPTGHSLKSLDLVTMKKLDSKVNIIP+IAK+D
Sbjct: 128 AYLQEELKIRRVLHSYHDSRIHVCLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPVIAKSD 187
Query: 707 TIAKNELHKFKSKIMSELVSNGVQIYQFPTDEETVAEINATMSVHLPFAVVGSTEEVKIG 886
I+K+EL KFK KI SELVSNGVQIYQFPTD+E+V+EIN TM+ HLPFAVVGSTEEVKIG
Sbjct: 188 AISKSELAKFKIKITSELVSNGVQIYQFPTDDESVSEINGTMNAHLPFAVVGSTEEVKIG 247
Query: 887 HQMAKARQYPWGVVQVENENH 949
++M +ARQYPWG VQVENE H
Sbjct: 248 NKMMRARQYPWGTVQVENEAH 268
Score = 25.0 bits (53), Expect(2) = e-122
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 949 CDFVKLREML 978
CDFVKLREML
Sbjct: 269 CDFVKLREML 278
>ref|NP_064326.2| septin-6 isoform 2 [Mus musculus].
Length = 429
Score = 433 bits (1114), Expect(2) = e-122
Identities = 210/261 (80%), Positives = 237/261 (90%)
Frame = +2
Query: 167 RPSNEELRNLSLSGHVGFDSLPDQLVNKSTSQGFCFNILCVGETGIGKSTLMDTLFNTKF 346
R E+ R + L+GHVGFDSLPDQLVNKS SQGFCFNILCVGETG+GKSTLMDTLFNTKF
Sbjct: 8 RQVGEDCRTVPLAGHVGFDSLPDQLVNKSVSQGFCFNILCVGETGLGKSTLMDTLFNTKF 67
Query: 347 ESDPATHNEPGVRLKARSYELQESNVRLKLTIVDTVGFGDQINKDDSYKPIVEYIDAQFE 526
E +PATH +PGV+L++ +Y+LQESNV LKLTIV TVGFGDQINK+DSYKPIVE+IDAQFE
Sbjct: 68 EGEPATHTQPGVQLQSNTYDLQESNVGLKLTIVSTVGFGDQINKEDSYKPIVEFIDAQFE 127
Query: 527 AYLQEELKIKRSLFNYHDTRIHACLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIAKAD 706
AYLQEELKI+R L +YHD+RIH CLYFIAPTGHSLKSLDLVTMKKLDSKVNIIP+IAK+D
Sbjct: 128 AYLQEELKIRRVLHSYHDSRIHVCLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPVIAKSD 187
Query: 707 TIAKNELHKFKSKIMSELVSNGVQIYQFPTDEETVAEINATMSVHLPFAVVGSTEEVKIG 886
I+K+EL KFK KI SELVSNGVQIYQFPTD+E+V+EIN TM+ HLPFAVVGSTEEVKIG
Sbjct: 188 AISKSELAKFKIKITSELVSNGVQIYQFPTDDESVSEINGTMNAHLPFAVVGSTEEVKIG 247
Query: 887 HQMAKARQYPWGVVQVENENH 949
++M +ARQYPWG VQVENE H
Sbjct: 248 NKMMRARQYPWGTVQVENEAH 268
Score = 25.0 bits (53), Expect(2) = e-122
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 949 CDFVKLREML 978
CDFVKLREML
Sbjct: 269 CDFVKLREML 278
>ref|NP_149156.1| septin-8 [Mus musculus].
Length = 430
Score = 432 bits (1112), Expect(2) = e-122
Identities = 211/256 (82%), Positives = 236/256 (92%)
Frame = +2
Query: 182 ELRNLSLSGHVGFDSLPDQLVNKSTSQGFCFNILCVGETGIGKSTLMDTLFNTKFESDPA 361
E R+LSL GHVGFDSLPDQLV+KS +QGF FNILCVGETGIGKSTLM+TLFNT FE++ A
Sbjct: 15 EPRSLSLGGHVGFDSLPDQLVSKSVTQGFSFNILCVGETGIGKSTLMNTLFNTTFETEEA 74
Query: 362 THNEPGVRLKARSYELQESNVRLKLTIVDTVGFGDQINKDDSYKPIVEYIDAQFEAYLQE 541
+H+E VRL+ ++Y+LQESNV LKLTIVD VGFGDQINKDDSY+PIV+YIDAQFE YLQE
Sbjct: 75 SHHEECVRLRPQTYDLQESNVHLKLTIVDAVGFGDQINKDDSYRPIVDYIDAQFENYLQE 134
Query: 542 ELKIKRSLFNYHDTRIHACLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIAKADTIAKN 721
ELKI+RSLF+YHDTRIH CLYFI PTGHSLKSLDLVTMKKLDSKVNIIPIIAKADTI+K+
Sbjct: 135 ELKIRRSLFDYHDTRIHVCLYFITPTGHSLKSLDLVTMKKLDSKVNIIPIIAKADTISKS 194
Query: 722 ELHKFKSKIMSELVSNGVQIYQFPTDEETVAEINATMSVHLPFAVVGSTEEVKIGHQMAK 901
ELHKFK KIM ELVSNGVQIYQFPTD+E VAEINA M+ HLPFAVVGSTEEVK+G+++ +
Sbjct: 195 ELHKFKIKIMGELVSNGVQIYQFPTDDEAVAEINAVMNAHLPFAVVGSTEEVKVGNKLVR 254
Query: 902 ARQYPWGVVQVENENH 949
ARQYPWGVVQVENENH
Sbjct: 255 ARQYPWGVVQVENENH 270
Score = 25.0 bits (53), Expect(2) = e-122
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 949 CDFVKLREML 978
CDFVKLREML
Sbjct: 271 CDFVKLREML 280
>ref|NP_001170794.1| septin-6 isoform 3 [Mus musculus].
Length = 428
Score = 432 bits (1112), Expect(2) = e-122
Identities = 209/257 (81%), Positives = 236/257 (91%)
Frame = +2
Query: 179 EELRNLSLSGHVGFDSLPDQLVNKSTSQGFCFNILCVGETGIGKSTLMDTLFNTKFESDP 358
E+ R + L+GHVGFDSLPDQLVNKS SQGFCFNILCVGETG+GKSTLMDTLFNTKFE +P
Sbjct: 11 EDCRTVPLAGHVGFDSLPDQLVNKSVSQGFCFNILCVGETGLGKSTLMDTLFNTKFEGEP 70
Query: 359 ATHNEPGVRLKARSYELQESNVRLKLTIVDTVGFGDQINKDDSYKPIVEYIDAQFEAYLQ 538
ATH +PGV+L++ +Y+LQESNV LKLTIV TVGFGDQINK+DSYKPIVE+IDAQFEAYLQ
Sbjct: 71 ATHTQPGVQLQSNTYDLQESNVGLKLTIVSTVGFGDQINKEDSYKPIVEFIDAQFEAYLQ 130
Query: 539 EELKIKRSLFNYHDTRIHACLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIAKADTIAK 718
EELKI+R L +YHD+RIH CLYFIAPTGHSLKSLDLVTMKKLDSKVNIIP+IAK+D I+K
Sbjct: 131 EELKIRRVLHSYHDSRIHVCLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPVIAKSDAISK 190
Query: 719 NELHKFKSKIMSELVSNGVQIYQFPTDEETVAEINATMSVHLPFAVVGSTEEVKIGHQMA 898
+EL KFK KI SELVSNGVQIYQFPTD+E+V+EIN TM+ HLPFAVVGSTEEVKIG++M
Sbjct: 191 SELAKFKIKITSELVSNGVQIYQFPTDDESVSEINGTMNAHLPFAVVGSTEEVKIGNKMM 250
Query: 899 KARQYPWGVVQVENENH 949
+ARQYPWG VQVENE H
Sbjct: 251 RARQYPWGTVQVENEAH 267
Score = 25.0 bits (53), Expect(2) = e-122
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 949 CDFVKLREML 978
CDFVKLREML
Sbjct: 268 CDFVKLREML 277
>ref|NP_001020081.2| septin-10 isoform 1 [Mus musculus].
Length = 452
Score = 407 bits (1047), Expect = e-114
Identities = 194/257 (75%), Positives = 232/257 (90%)
Frame = +2
Query: 179 EELRNLSLSGHVGFDSLPDQLVNKSTSQGFCFNILCVGETGIGKSTLMDTLFNTKFESDP 358
E R+LS+ GHVGF+SLPDQLV++S QGFCFNILCVGETGIGKSTL++TLFNT FE
Sbjct: 9 EHPRSLSMCGHVGFESLPDQLVDRSIEQGFCFNILCVGETGIGKSTLINTLFNTNFEELE 68
Query: 359 ATHNEPGVRLKARSYELQESNVRLKLTIVDTVGFGDQINKDDSYKPIVEYIDAQFEAYLQ 538
++H P VRL+A++YELQESNVRLKLTIV+TVGFGDQINK+DSY+PIV+YID QFEAYLQ
Sbjct: 69 SSHFCPCVRLRAQTYELQESNVRLKLTIVNTVGFGDQINKEDSYQPIVDYIDDQFEAYLQ 128
Query: 539 EELKIKRSLFNYHDTRIHACLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIAKADTIAK 718
EELKIKR+LFNYHD+RIH CLYFIAPTGHSL++LDL+TMK LD+KVNIIP+IAKADTI+K
Sbjct: 129 EELKIKRALFNYHDSRIHVCLYFIAPTGHSLRTLDLLTMKSLDNKVNIIPLIAKADTISK 188
Query: 719 NELHKFKSKIMSELVSNGVQIYQFPTDEETVAEINATMSVHLPFAVVGSTEEVKIGHQMA 898
+EL KFK K+M+ELV NGVQIYQFPTD++T ++IN M+ HLPFAVVGS +E+K+G++M
Sbjct: 189 SELQKFKMKLMNELVINGVQIYQFPTDDDTTSKINGAMNGHLPFAVVGSMDEIKVGNKMV 248
Query: 899 KARQYPWGVVQVENENH 949
K RQYPWG+VQVENENH
Sbjct: 249 KGRQYPWGIVQVENENH 265
>ref|NP_001020082.1| septin-10 isoform 2 [Mus musculus].
Length = 427
Score = 407 bits (1047), Expect = e-114
Identities = 194/257 (75%), Positives = 232/257 (90%)
Frame = +2
Query: 179 EELRNLSLSGHVGFDSLPDQLVNKSTSQGFCFNILCVGETGIGKSTLMDTLFNTKFESDP 358
E R+LS+ GHVGF+SLPDQLV++S QGFCFNILCVGETGIGKSTL++TLFNT FE
Sbjct: 9 EHPRSLSMCGHVGFESLPDQLVDRSIEQGFCFNILCVGETGIGKSTLINTLFNTNFEELE 68
Query: 359 ATHNEPGVRLKARSYELQESNVRLKLTIVDTVGFGDQINKDDSYKPIVEYIDAQFEAYLQ 538
++H P VRL+A++YELQESNVRLKLTIV+TVGFGDQINK+DSY+PIV+YID QFEAYLQ
Sbjct: 69 SSHFCPCVRLRAQTYELQESNVRLKLTIVNTVGFGDQINKEDSYQPIVDYIDDQFEAYLQ 128
Query: 539 EELKIKRSLFNYHDTRIHACLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIAKADTIAK 718
EELKIKR+LFNYHD+RIH CLYFIAPTGHSL++LDL+TMK LD+KVNIIP+IAKADTI+K
Sbjct: 129 EELKIKRALFNYHDSRIHVCLYFIAPTGHSLRTLDLLTMKSLDNKVNIIPLIAKADTISK 188
Query: 719 NELHKFKSKIMSELVSNGVQIYQFPTDEETVAEINATMSVHLPFAVVGSTEEVKIGHQMA 898
+EL KFK K+M+ELV NGVQIYQFPTD++T ++IN M+ HLPFAVVGS +E+K+G++M
Sbjct: 189 SELQKFKMKLMNELVINGVQIYQFPTDDDTTSKINGAMNGHLPFAVVGSMDEIKVGNKMV 248
Query: 899 KARQYPWGVVQVENENH 949
K RQYPWG+VQVENENH
Sbjct: 249 KGRQYPWGIVQVENENH 265
>ref|NP_083102.1| septin-14 [Mus musculus].
Length = 429
Score = 350 bits (897), Expect(2) = 1e-96
Identities = 169/260 (65%), Positives = 210/260 (80%)
Frame = +2
Query: 170 PSNEELRNLSLSGHVGFDSLPDQLVNKSTSQGFCFNILCVGETGIGKSTLMDTLFNTKFE 349
P E +R LS GH GF+ LP QLVNKS +GF FNILCVGETGIGK+TL++TLFNT +
Sbjct: 18 PQKENIRCLSTLGHFGFECLPTQLVNKSIQKGFSFNILCVGETGIGKTTLINTLFNTNLK 77
Query: 350 SDPATHNEPGVRLKARSYELQESNVRLKLTIVDTVGFGDQINKDDSYKPIVEYIDAQFEA 529
++H V L ++YEL E N+ L+LT+V TVG+GDQINK+ SY+P+V+Y+DAQFEA
Sbjct: 78 ETKSSHFYSKVGLTVKTYELLERNIPLRLTVVKTVGYGDQINKEASYQPVVDYLDAQFEA 137
Query: 530 YLQEELKIKRSLFNYHDTRIHACLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIAKADT 709
YLQEELKIKRSL +YHD+RIH CLYFI PTGHSLKSLDL+TMK +D +VNIIP+IAKAD+
Sbjct: 138 YLQEELKIKRSLADYHDSRIHVCLYFITPTGHSLKSLDLLTMKSIDRRVNIIPLIAKADS 197
Query: 710 IAKNELHKFKSKIMSELVSNGVQIYQFPTDEETVAEINATMSVHLPFAVVGSTEEVKIGH 889
++KN+L +FK+ IMSEL SNG+QIYQF D+E A++N+ S LPFAVVGS EEVK+G
Sbjct: 198 LSKNDLQRFKNNIMSELNSNGIQIYQFQVDDEASAQVNS--SGLLPFAVVGSMEEVKVGK 255
Query: 890 QMAKARQYPWGVVQVENENH 949
+M + R YPWGV+QVENENH
Sbjct: 256 RMVRGRHYPWGVLQVENENH 275
Score = 22.7 bits (47), Expect(2) = 1e-96
Identities = 8/10 (80%), Positives = 10/10 (100%)
Frame = +1
Query: 949 CDFVKLREML 978
CDFVKLR++L
Sbjct: 276 CDFVKLRDLL 285
>ref|NP_036019.2| neuronal-specific septin-3 [Mus musculus].
Length = 337
Score = 224 bits (571), Expect = 8e-59
Identities = 113/261 (43%), Positives = 170/261 (65%), Gaps = 8/261 (3%)
Frame = +2
Query: 191 NLSLSGHVGFDSLPDQLVNKSTSQGFCFNILCVGETGIGKSTLMDTLFNTKFESDPATHN 370
N +L G++G D++ +Q+ K+ GF FNI+ VG++G+GKSTL++TLF ++ ++ N
Sbjct: 22 NSNLLGYIGIDTIIEQMRKKTMKTGFDFNIMVVGQSGLGKSTLVNTLFKSQVSRKASSWN 81
Query: 371 EPG-----VRLKARSYELQESNVRLKLTIVDTVGFGDQINKDDSYKPIVEYIDAQFEAYL 535
V +KA + ++E V++KLT++DT GFGDQIN ++ ++PI +YI+ Q+E +L
Sbjct: 82 REEKIPKTVEIKAIGHVIEEGGVKMKLTVIDTPGFGDQINNENCWEPIEKYINEQYEKFL 141
Query: 536 QEELKIKRSLFNYHDTRIHACLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIAKADTIA 715
+EE+ I R DTR+H CLYFI+PTGHSL+ LDL MK L VNIIP+IAKADT+
Sbjct: 142 KEEVNIARKK-RIPDTRVHCCLYFISPTGHSLRPLDLEFMKHLSKVVNIIPVIAKADTMT 200
Query: 716 KNELHKFKSKIMSELVSNGVQIY---QFPTDEETVAEINATMSVHLPFAVVGSTEEVKIG 886
E +FK ++ EL NG++ Y +F D E E + +PFAVVGS +E ++
Sbjct: 201 LEEKSEFKQRVRKELEVNGIEFYPQKEFDEDLEDKTENDKIRQESMPFAVVGSDKEYQVN 260
Query: 887 HQMAKARQYPWGVVQVENENH 949
+ R+ PWG+++VEN NH
Sbjct: 261 GKRVLGRKTPWGIIEVENLNH 281
>ref|NP_001192296.1| septin-7 isoform 2 [Mus musculus].
Length = 436
Score = 222 bits (565), Expect = 4e-58
Identities = 112/256 (43%), Positives = 168/256 (65%), Gaps = 5/256 (1%)
Frame = +2
Query: 197 SLSGHVGFDSLPDQLVNKSTSQGFCFNILCVGETGIGKSTLMDTLFNTKFESD----PAT 364
+L G+VGF +LP+Q+ KS +GF F ++ VGE+G+GKSTL+++LF T S P+
Sbjct: 25 NLEGYVGFANLPNQVYRKSVKRGFEFTLMVVGESGLGKSTLINSLFLTDLYSPEYPGPSH 84
Query: 365 HNEPGVRLKARSYELQESNVRLKLTIVDTVGFGDQINKDDSYKPIVEYIDAQFEAYLQEE 544
+ V+++ ++E V+L LTIVDT GFGD ++ + ++P+++YID++FE YL E
Sbjct: 85 RIKKTVQVEQSKVLIKEGGVQLLLTIVDTPGFGDAVDNSNCWQPVIDYIDSKFEDYLNAE 144
Query: 545 LKIKRSLFNYHDTRIHACLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIAKADTIAKNE 724
++ R D R+ CLYFIAP+GH LK LD+ MK+L KVNIIP+IAKADT+ E
Sbjct: 145 SRVNRR--QMPDNRVQCCLYFIAPSGHGLKPLDIEFMKRLHEKVNIIPLIAKADTLTPEE 202
Query: 725 LHKFKSKIMSELVSNGVQIYQFP-TDEETVAEINATMSVHLPFAVVGSTEEVKIGHQMAK 901
+FK +IM E+ + ++IY+FP TD+E ++ + LP AVVGS +++ + +
Sbjct: 203 CQQFKKQIMKEIQEHKIKIYEFPETDDEEENKLVKKIKDRLPLAVVGSNTIIEVNGKRVR 262
Query: 902 ARQYPWGVVQVENENH 949
RQYPWGV +VEN H
Sbjct: 263 GRQYPWGVAEVENGEH 278
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 28,243,794
Number of extensions: 700023
Number of successful extensions: 2138
Number of sequences better than 1.0e-05: 24
Number of HSP's gapped: 2089
Number of HSP's successfully gapped: 32
Length of query: 326
Length of database: 15,617,559
Length adjustment: 102
Effective length of query: 224
Effective length of database: 12,553,887
Effective search space: 2812070688
Effective search space used: 2812070688
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-003362
(980 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_003129144.1| PREDICTED: septin-11 [Sus scrofa]. 518 e-148
Alignment gi|XP_003135393.1| PREDICTED: septin-6-like isoform 2 [Sus scro... 434 e-123
Alignment gi|XP_003360479.1| PREDICTED: septin-6-like [Sus scrofa]. 434 e-123
Alignment gi|XP_003135394.1| PREDICTED: septin-6-like isoform 3 [Sus scro... 434 e-123
Alignment gi|XP_003135392.1| PREDICTED: septin-6-like isoform 1 [Sus scro... 434 e-123
Alignment gi|XP_003123974.1| PREDICTED: septin-8 [Sus scrofa]. 431 e-122
Alignment gi|XP_003124877.2| PREDICTED: septin-10-like [Sus scrofa]. 360 e-100
Alignment gi|XP_003124499.2| PREDICTED: septin-14-like [Sus scrofa]. 240 1e-63
Alignment gi|XP_001928704.1| PREDICTED: neuronal-specific septin-3 [Sus s... 225 3e-59
Alignment gi|XP_003360219.1| PREDICTED: septin-7-like [Sus scrofa]. 222 3e-58
>ref|XP_003129144.1| PREDICTED: septin-11 [Sus scrofa].
Length = 429
Score = 518 bits (1335), Expect(2) = e-148
Identities = 259/261 (99%), Positives = 261/261 (100%)
Frame = +2
Query: 167 RPSNEELRNLSLSGHVGFDSLPDQLVNKSTSQGFCFNILCVGETGIGKSTLMDTLFNTKF 346
RPSNEELRNLSLSGHVGFDSLPDQLVNKSTSQGFCFNILCVGETGIGKSTLMDTLFNTKF
Sbjct: 7 RPSNEELRNLSLSGHVGFDSLPDQLVNKSTSQGFCFNILCVGETGIGKSTLMDTLFNTKF 66
Query: 347 ESDPATHNEPGVRLKARSYELQESNVRLKLTIVDTVGFGDQINKDDSYKPIVEYIDAQFE 526
ESDPATHNEPGVRLKARSYELQESNVRLKLTIVDTVGFGDQINKDDSYKPIVEYIDAQFE
Sbjct: 67 ESDPATHNEPGVRLKARSYELQESNVRLKLTIVDTVGFGDQINKDDSYKPIVEYIDAQFE 126
Query: 527 AYLQEELKIKRSLFNYHDTRIHACLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIAKAD 706
AYLQEELKIKRSLFNYHDTRIHACLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIAKAD
Sbjct: 127 AYLQEELKIKRSLFNYHDTRIHACLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIAKAD 186
Query: 707 TIAKNELHKFKSKIMSELVSNGVQIYQFPTDEETVAEINATMSVHLPFAVVGSTEEVKIG 886
TIAKNELHKFKSKIMSELVSNGVQIYQFPTDEETVAEINATMSVHLPFAVVGSTEEVKIG
Sbjct: 187 TIAKNELHKFKSKIMSELVSNGVQIYQFPTDEETVAEINATMSVHLPFAVVGSTEEVKIG 246
Query: 887 HQMAKARQYPWGVVQVENENH 949
++MAKARQYPWGVVQVENENH
Sbjct: 247 NKMAKARQYPWGVVQVENENH 267
Score = 25.0 bits (53), Expect(2) = e-148
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 949 CDFVKLREML 978
CDFVKLREML
Sbjct: 268 CDFVKLREML 277
>ref|XP_003135393.1| PREDICTED: septin-6-like isoform 2 [Sus scrofa].
Length = 429
Score = 434 bits (1117), Expect(2) = e-123
Identities = 212/261 (81%), Positives = 236/261 (90%)
Frame = +2
Query: 167 RPSNEELRNLSLSGHVGFDSLPDQLVNKSTSQGFCFNILCVGETGIGKSTLMDTLFNTKF 346
R E R + L+GHVGFDSLPDQLVNKS SQGFCFNILCVGETG+GKSTLMDTLFNTKF
Sbjct: 8 RQVGEGCRTVPLAGHVGFDSLPDQLVNKSVSQGFCFNILCVGETGLGKSTLMDTLFNTKF 67
Query: 347 ESDPATHNEPGVRLKARSYELQESNVRLKLTIVDTVGFGDQINKDDSYKPIVEYIDAQFE 526
E +PATH +PGV+L++ +Y+LQESNV LKLTIV TVGFGDQINK+DSYKPIVE+IDAQFE
Sbjct: 68 EGEPATHTQPGVQLRSNTYDLQESNVGLKLTIVSTVGFGDQINKEDSYKPIVEFIDAQFE 127
Query: 527 AYLQEELKIKRSLFNYHDTRIHACLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIAKAD 706
AYLQEELKI+R L YHD+RIHACLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIAK+D
Sbjct: 128 AYLQEELKIRRVLHTYHDSRIHACLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIAKSD 187
Query: 707 TIAKNELHKFKSKIMSELVSNGVQIYQFPTDEETVAEINATMSVHLPFAVVGSTEEVKIG 886
I+K+EL KFK KI SELVSNGVQIYQFPTD+E+VAEIN TM+ HLPFAV+GSTEE+KIG
Sbjct: 188 AISKSELTKFKIKITSELVSNGVQIYQFPTDDESVAEINGTMNAHLPFAVIGSTEELKIG 247
Query: 887 HQMAKARQYPWGVVQVENENH 949
++M KARQYPWG VQVENE H
Sbjct: 248 NKMMKARQYPWGTVQVENEAH 268
Score = 25.0 bits (53), Expect(2) = e-123
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 949 CDFVKLREML 978
CDFVKLREML
Sbjct: 269 CDFVKLREML 278
>ref|XP_003360479.1| PREDICTED: septin-6-like [Sus scrofa].
Length = 427
Score = 434 bits (1117), Expect(2) = e-123
Identities = 212/261 (81%), Positives = 236/261 (90%)
Frame = +2
Query: 167 RPSNEELRNLSLSGHVGFDSLPDQLVNKSTSQGFCFNILCVGETGIGKSTLMDTLFNTKF 346
R E R + L+GHVGFDSLPDQLVNKS SQGFCFNILCVGETG+GKSTLMDTLFNTKF
Sbjct: 8 RQVGEGCRTVPLAGHVGFDSLPDQLVNKSVSQGFCFNILCVGETGLGKSTLMDTLFNTKF 67
Query: 347 ESDPATHNEPGVRLKARSYELQESNVRLKLTIVDTVGFGDQINKDDSYKPIVEYIDAQFE 526
E +PATH +PGV+L++ +Y+LQESNV LKLTIV TVGFGDQINK+DSYKPIVE+IDAQFE
Sbjct: 68 EGEPATHTQPGVQLRSNTYDLQESNVGLKLTIVSTVGFGDQINKEDSYKPIVEFIDAQFE 127
Query: 527 AYLQEELKIKRSLFNYHDTRIHACLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIAKAD 706
AYLQEELKI+R L YHD+RIHACLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIAK+D
Sbjct: 128 AYLQEELKIRRVLHTYHDSRIHACLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIAKSD 187
Query: 707 TIAKNELHKFKSKIMSELVSNGVQIYQFPTDEETVAEINATMSVHLPFAVVGSTEEVKIG 886
I+K+EL KFK KI SELVSNGVQIYQFPTD+E+VAEIN TM+ HLPFAV+GSTEE+KIG
Sbjct: 188 AISKSELTKFKIKITSELVSNGVQIYQFPTDDESVAEINGTMNAHLPFAVIGSTEELKIG 247
Query: 887 HQMAKARQYPWGVVQVENENH 949
++M KARQYPWG VQVENE H
Sbjct: 248 NKMMKARQYPWGTVQVENEAH 268
Score = 25.0 bits (53), Expect(2) = e-123
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 949 CDFVKLREML 978
CDFVKLREML
Sbjct: 269 CDFVKLREML 278
>ref|XP_003135394.1| PREDICTED: septin-6-like isoform 3 [Sus scrofa].
Length = 427
Score = 434 bits (1117), Expect(2) = e-123
Identities = 212/261 (81%), Positives = 236/261 (90%)
Frame = +2
Query: 167 RPSNEELRNLSLSGHVGFDSLPDQLVNKSTSQGFCFNILCVGETGIGKSTLMDTLFNTKF 346
R E R + L+GHVGFDSLPDQLVNKS SQGFCFNILCVGETG+GKSTLMDTLFNTKF
Sbjct: 8 RQVGEGCRTVPLAGHVGFDSLPDQLVNKSVSQGFCFNILCVGETGLGKSTLMDTLFNTKF 67
Query: 347 ESDPATHNEPGVRLKARSYELQESNVRLKLTIVDTVGFGDQINKDDSYKPIVEYIDAQFE 526
E +PATH +PGV+L++ +Y+LQESNV LKLTIV TVGFGDQINK+DSYKPIVE+IDAQFE
Sbjct: 68 EGEPATHTQPGVQLRSNTYDLQESNVGLKLTIVSTVGFGDQINKEDSYKPIVEFIDAQFE 127
Query: 527 AYLQEELKIKRSLFNYHDTRIHACLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIAKAD 706
AYLQEELKI+R L YHD+RIHACLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIAK+D
Sbjct: 128 AYLQEELKIRRVLHTYHDSRIHACLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIAKSD 187
Query: 707 TIAKNELHKFKSKIMSELVSNGVQIYQFPTDEETVAEINATMSVHLPFAVVGSTEEVKIG 886
I+K+EL KFK KI SELVSNGVQIYQFPTD+E+VAEIN TM+ HLPFAV+GSTEE+KIG
Sbjct: 188 AISKSELTKFKIKITSELVSNGVQIYQFPTDDESVAEINGTMNAHLPFAVIGSTEELKIG 247
Query: 887 HQMAKARQYPWGVVQVENENH 949
++M KARQYPWG VQVENE H
Sbjct: 248 NKMMKARQYPWGTVQVENEAH 268
Score = 25.0 bits (53), Expect(2) = e-123
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 949 CDFVKLREML 978
CDFVKLREML
Sbjct: 269 CDFVKLREML 278
>ref|XP_003135392.1| PREDICTED: septin-6-like isoform 1 [Sus scrofa].
Length = 427
Score = 434 bits (1117), Expect(2) = e-123
Identities = 212/261 (81%), Positives = 236/261 (90%)
Frame = +2
Query: 167 RPSNEELRNLSLSGHVGFDSLPDQLVNKSTSQGFCFNILCVGETGIGKSTLMDTLFNTKF 346
R E R + L+GHVGFDSLPDQLVNKS SQGFCFNILCVGETG+GKSTLMDTLFNTKF
Sbjct: 8 RQVGEGCRTVPLAGHVGFDSLPDQLVNKSVSQGFCFNILCVGETGLGKSTLMDTLFNTKF 67
Query: 347 ESDPATHNEPGVRLKARSYELQESNVRLKLTIVDTVGFGDQINKDDSYKPIVEYIDAQFE 526
E +PATH +PGV+L++ +Y+LQESNV LKLTIV TVGFGDQINK+DSYKPIVE+IDAQFE
Sbjct: 68 EGEPATHTQPGVQLRSNTYDLQESNVGLKLTIVSTVGFGDQINKEDSYKPIVEFIDAQFE 127
Query: 527 AYLQEELKIKRSLFNYHDTRIHACLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIAKAD 706
AYLQEELKI+R L YHD+RIHACLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIAK+D
Sbjct: 128 AYLQEELKIRRVLHTYHDSRIHACLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIAKSD 187
Query: 707 TIAKNELHKFKSKIMSELVSNGVQIYQFPTDEETVAEINATMSVHLPFAVVGSTEEVKIG 886
I+K+EL KFK KI SELVSNGVQIYQFPTD+E+VAEIN TM+ HLPFAV+GSTEE+KIG
Sbjct: 188 AISKSELTKFKIKITSELVSNGVQIYQFPTDDESVAEINGTMNAHLPFAVIGSTEELKIG 247
Query: 887 HQMAKARQYPWGVVQVENENH 949
++M KARQYPWG VQVENE H
Sbjct: 248 NKMMKARQYPWGTVQVENEAH 268
Score = 25.0 bits (53), Expect(2) = e-123
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 949 CDFVKLREML 978
CDFVKLREML
Sbjct: 269 CDFVKLREML 278
>ref|XP_003123974.1| PREDICTED: septin-8 [Sus scrofa].
Length = 483
Score = 431 bits (1109), Expect(2) = e-122
Identities = 210/256 (82%), Positives = 237/256 (92%)
Frame = +2
Query: 182 ELRNLSLSGHVGFDSLPDQLVNKSTSQGFCFNILCVGETGIGKSTLMDTLFNTKFESDPA 361
E R+LSL GHVGFDSLPDQLV+KS +QGF FNILCVGETGIGKSTLM+TLFNT FE++ A
Sbjct: 15 EPRSLSLGGHVGFDSLPDQLVSKSVTQGFSFNILCVGETGIGKSTLMNTLFNTTFETEEA 74
Query: 362 THNEPGVRLKARSYELQESNVRLKLTIVDTVGFGDQINKDDSYKPIVEYIDAQFEAYLQE 541
+H+E VRL+ ++Y+LQESNV+LKLTIVD VGFGDQINKD+SY+PIV+YIDAQFE YLQE
Sbjct: 75 SHHEECVRLRPQTYDLQESNVQLKLTIVDAVGFGDQINKDESYRPIVDYIDAQFENYLQE 134
Query: 542 ELKIKRSLFNYHDTRIHACLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIAKADTIAKN 721
ELKI+RSLF+YHDTRIH CLYFI PTGHSLKSLDLVTMKKLDSKVNIIPIIAKADTI+K+
Sbjct: 135 ELKIRRSLFDYHDTRIHVCLYFITPTGHSLKSLDLVTMKKLDSKVNIIPIIAKADTISKS 194
Query: 722 ELHKFKSKIMSELVSNGVQIYQFPTDEETVAEINATMSVHLPFAVVGSTEEVKIGHQMAK 901
ELHKFK KIM ELVSNGVQIYQFPTD+E VAEINA M+ HLPFAVVGSTEEVK+G+++ +
Sbjct: 195 ELHKFKIKIMGELVSNGVQIYQFPTDDEAVAEINAVMNAHLPFAVVGSTEEVKVGNKLVR 254
Query: 902 ARQYPWGVVQVENENH 949
ARQYPWGVVQVENENH
Sbjct: 255 ARQYPWGVVQVENENH 270
Score = 25.0 bits (53), Expect(2) = e-122
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 949 CDFVKLREML 978
CDFVKLREML
Sbjct: 271 CDFVKLREML 280
>ref|XP_003124877.2| PREDICTED: septin-10-like [Sus scrofa].
Length = 320
Score = 360 bits (923), Expect = e-100
Identities = 173/224 (77%), Positives = 204/224 (91%)
Frame = +2
Query: 167 RPSNEELRNLSLSGHVGFDSLPDQLVNKSTSQGFCFNILCVGETGIGKSTLMDTLFNTKF 346
+ E R+L++SGHVGF+SLPDQLVN+S QGFCFNILCVGE+GIGKSTL+DTLFNT F
Sbjct: 95 KQKKENTRSLTMSGHVGFESLPDQLVNRSIQQGFCFNILCVGESGIGKSTLIDTLFNTNF 154
Query: 347 ESDPATHNEPGVRLKARSYELQESNVRLKLTIVDTVGFGDQINKDDSYKPIVEYIDAQFE 526
E ++H P VRLKA++Y+LQESNVRLKLTIV+TVGFGDQINK++SY+PIV+YIDAQFE
Sbjct: 155 EDHESSHFYPHVRLKAQTYDLQESNVRLKLTIVNTVGFGDQINKEESYQPIVDYIDAQFE 214
Query: 527 AYLQEELKIKRSLFNYHDTRIHACLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIAKAD 706
AYLQEELKI+RSLFNYHD+RIH CLYFI+PTGHSLK+LDL+TMK LDSKVNIIP+IAKAD
Sbjct: 215 AYLQEELKIQRSLFNYHDSRIHVCLYFISPTGHSLKTLDLLTMKSLDSKVNIIPVIAKAD 274
Query: 707 TIAKNELHKFKSKIMSELVSNGVQIYQFPTDEETVAEINATMSV 838
I+K EL KFK K+MSELVSNGVQIYQFPTD+ET+A+INA+M+V
Sbjct: 275 AISKTELQKFKIKLMSELVSNGVQIYQFPTDDETIAKINASMNV 318
>ref|XP_003124499.2| PREDICTED: septin-14-like [Sus scrofa].
Length = 197
Score = 240 bits (612), Expect = 1e-63
Identities = 115/166 (69%), Positives = 139/166 (83%)
Frame = +2
Query: 179 EELRNLSLSGHVGFDSLPDQLVNKSTSQGFCFNILCVGETGIGKSTLMDTLFNTKFESDP 358
+ +R L++ GH GFD LP QLVNKS QGF FNILCVGETGIGKSTL+DTLFNT +
Sbjct: 22 DNIRCLTMLGHFGFDCLPHQLVNKSVQQGFFFNILCVGETGIGKSTLIDTLFNTNLKDKK 81
Query: 359 ATHNEPGVRLKARSYELQESNVRLKLTIVDTVGFGDQINKDDSYKPIVEYIDAQFEAYLQ 538
++H V LK ++YELQES+V+LKLT+V TVG+GDQINK+ SY+PIV+YIDAQFE+YLQ
Sbjct: 82 SSHFYSNVGLKIQTYELQESSVQLKLTVVKTVGYGDQINKESSYQPIVDYIDAQFESYLQ 141
Query: 539 EELKIKRSLFNYHDTRIHACLYFIAPTGHSLKSLDLVTMKKLDSKV 676
EELKIKR +YHD+RIH CLYFI+PTGHSLKSLDL+TMK +D+KV
Sbjct: 142 EELKIKRCFADYHDSRIHVCLYFISPTGHSLKSLDLLTMKNIDTKV 187
>ref|XP_001928704.1| PREDICTED: neuronal-specific septin-3 [Sus scrofa].
Length = 358
Score = 225 bits (574), Expect = 3e-59
Identities = 114/261 (43%), Positives = 170/261 (65%), Gaps = 8/261 (3%)
Frame = +2
Query: 191 NLSLSGHVGFDSLPDQLVNKSTSQGFCFNILCVGETGIGKSTLMDTLFNTKFESDPATHN 370
N SL G++G D++ +Q+ K+ GF FNI+ VG++G+GKSTL++TLF ++ ++ N
Sbjct: 35 NSSLLGYIGIDTIIEQMRKKTMKTGFDFNIMVVGQSGLGKSTLVNTLFKSQVSRKASSWN 94
Query: 371 EPG-----VRLKARSYELQESNVRLKLTIVDTVGFGDQINKDDSYKPIVEYIDAQFEAYL 535
V +KA + ++E V++KLT++DT GFGDQIN ++ ++PI +YI+ Q+E +L
Sbjct: 95 REEKIPKTVEIKAIGHVIEEGGVKMKLTVIDTPGFGDQINNENCWEPIEKYINEQYEKFL 154
Query: 536 QEELKIKRSLFNYHDTRIHACLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIAKADTIA 715
+EE+ I R DTR+H CLYFI+PTGHSL+ LDL MK L VNIIP+IAKADT+
Sbjct: 155 KEEVNIARKK-RIPDTRVHCCLYFISPTGHSLRPLDLEFMKHLSKVVNIIPVIAKADTMT 213
Query: 716 KNELHKFKSKIMSELVSNGVQIY---QFPTDEETVAEINATMSVHLPFAVVGSTEEVKIG 886
E +FK ++ EL NG++ Y +F D E E + +PFAVVGS +E ++
Sbjct: 214 LEEKSEFKQRVRKELEVNGIEFYPQKEFDEDLEDKTENDKIRQESMPFAVVGSDKEYQVN 273
Query: 887 HQMAKARQYPWGVVQVENENH 949
+ R+ PWG+++VEN NH
Sbjct: 274 GKRVLGRKTPWGIIEVENLNH 294
>ref|XP_003360219.1| PREDICTED: septin-7-like [Sus scrofa].
Length = 436
Score = 222 bits (565), Expect = 3e-58
Identities = 112/256 (43%), Positives = 168/256 (65%), Gaps = 5/256 (1%)
Frame = +2
Query: 197 SLSGHVGFDSLPDQLVNKSTSQGFCFNILCVGETGIGKSTLMDTLFNTKFESD----PAT 364
+L G+VGF +LP+Q+ KS +GF F ++ VGE+G+GKSTL+++LF T S P+
Sbjct: 25 NLEGYVGFANLPNQVYRKSVKRGFEFTLMVVGESGLGKSTLINSLFLTDLYSPEYPGPSH 84
Query: 365 HNEPGVRLKARSYELQESNVRLKLTIVDTVGFGDQINKDDSYKPIVEYIDAQFEAYLQEE 544
+ V+++ ++E V+L LTIVDT GFGD ++ + ++P+++YID++FE YL E
Sbjct: 85 RIKKTVQVEQSKVLIKEGGVQLLLTIVDTPGFGDAVDNSNCWQPVIDYIDSKFEDYLNAE 144
Query: 545 LKIKRSLFNYHDTRIHACLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIAKADTIAKNE 724
++ R D R+ CLYFIAP+GH LK LD+ MK+L KVNIIP+IAKADT+ E
Sbjct: 145 SRVNRR--QMPDNRVQCCLYFIAPSGHGLKPLDIEFMKRLHEKVNIIPLIAKADTLTPEE 202
Query: 725 LHKFKSKIMSELVSNGVQIYQFP-TDEETVAEINATMSVHLPFAVVGSTEEVKIGHQMAK 901
+FK +IM E+ + ++IY+FP TD+E ++ + LP AVVGS +++ + +
Sbjct: 203 CQQFKKQIMKEIQEHKIKIYEFPETDDEEENKLVKKIKDRLPLAVVGSNTIIEVNGKRVR 262
Query: 902 ARQYPWGVVQVENENH 949
RQYPWGV +VEN H
Sbjct: 263 GRQYPWGVAEVENGEH 278
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 20,845,219
Number of extensions: 523225
Number of successful extensions: 1714
Number of sequences better than 1.0e-05: 24
Number of HSP's gapped: 1671
Number of HSP's successfully gapped: 36
Length of query: 326
Length of database: 11,343,932
Length adjustment: 99
Effective length of query: 227
Effective length of database: 8,879,129
Effective search space: 2015562283
Effective search space used: 2015562283
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-003362
(980 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr08 392 e-106
Sscrofa_Chr02 127 1e-26
Sscrofa_ChrX 74 2e-10
Sscrofa_Chr03 74 2e-10
>Sscrofa_Chr08
|| Length = 148491826
Score = 392 bits (198), Expect = e-106
Identities = 201/202 (99%)
Strand = Plus / Plus
Query: 290 ggcgagacgggcattggcaaatccacgctaatggacactttattcaacaccaaatttgaa 349
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76848828 ggcgagacgggcattggcaaatccacgctaatggacactttattcaacaccaaatttgaa 76848887
Query: 350 agtgacccagctactcacaatgaaccgggtgtccggttaaaagccagaagttatgagctt 409
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76848888 agtgacccagctactcacaatgaaccgggtgtccggttaaaagccagaagttatgagctt 76848947
Query: 410 caggaaagcaacgtgcggctgaagttaaccatcgtggacaccgtgggcttcggagaccag 469
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76848948 caggaaagcaacgtgcggctgaagttaaccatcgtggacaccgtgggcttcggagaccag 76849007
Query: 470 ataaataaggatgacagctaca 491
||||||||||||||||| ||||
Sbjct: 76849008 ataaataaggatgacaggtaca 76849029
Score = 379 bits (191), Expect = e-102
Identities = 191/191 (100%)
Strand = Plus / Plus
Query: 485 agctacaagcccatagtggaatatatcgatgcccagtttgaagcctacttgcaagaggaa 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76856230 agctacaagcccatagtggaatatatcgatgcccagtttgaagcctacttgcaagaggaa 76856289
Query: 545 ttgaagatcaaacgttccctcttcaactaccacgacaccaggatccacgcctgtctctac 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76856290 ttgaagatcaaacgttccctcttcaactaccacgacaccaggatccacgcctgtctctac 76856349
Query: 605 tttatcgccccaaccgggcactcgctgaagtccctggacctggtcaccatgaagaagctg 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76856350 tttatcgccccaaccgggcactcgctgaagtccctggacctggtcaccatgaagaagctg 76856409
Query: 665 gacagcaaggt 675
|||||||||||
Sbjct: 76856410 gacagcaaggt 76856420
Score = 329 bits (166), Expect = 2e-87
Identities = 166/166 (100%)
Strand = Plus / Plus
Query: 672 aggtgaacatcattccaatcattgcaaaagccgacaccatcgccaagaacgaactgcaca 731
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76861087 aggtgaacatcattccaatcattgcaaaagccgacaccatcgccaagaacgaactgcaca 76861146
Query: 732 agttcaagagtaagatcatgagtgaactggtcagcaatggcgtccagatatatcagttcc 791
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76861147 agttcaagagtaagatcatgagtgaactggtcagcaatggcgtccagatatatcagttcc 76861206
Query: 792 ccaccgatgaagaaacagtggcagagattaatgcaacgatgagtgt 837
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76861207 ccaccgatgaagaaacagtggcagagattaatgcaacgatgagtgt 76861252
Score = 230 bits (116), Expect = 1e-57
Identities = 116/116 (100%)
Strand = Plus / Plus
Query: 176 aatgaagagcttcgaaacttgtccctgtctggccatgttggattcgacagtctccccgac 235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76838267 aatgaagagcttcgaaacttgtccctgtctggccatgttggattcgacagtctccccgac 76838326
Query: 236 cagctggtcaacaagtctacgtctcaagggttctgtttcaacatcctgtgtgtcgg 291
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76838327 cagctggtcaacaagtctacgtctcaagggttctgtttcaacatcctgtgtgtcgg 76838382
Score = 194 bits (98), Expect = 6e-47
Identities = 98/98 (100%)
Strand = Plus / Plus
Query: 78 ccagagccggagtccaagcagcagcctgtgttggcggagagcacccgggcgcagccggag 137
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76788927 ccagagccggagtccaagcagcagcctgtgttggcggagagcacccgggcgcagccggag 76788986
Query: 138 ccgcagccgcgatggccgtggccgtggggagaccgtct 175
||||||||||||||||||||||||||||||||||||||
Sbjct: 76788987 ccgcagccgcgatggccgtggccgtggggagaccgtct 76789024
Score = 176 bits (89), Expect = 1e-41
Identities = 95/97 (97%)
Strand = Plus / Plus
Query: 836 gtccacctcccgttcgccgtggtgggcagcaccgaagaggtgaagattggccaccagatg 895
||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct: 76864502 gtccacctcccgttcgccgtggtgggcagcaccgaagaggtgaagattggcaacaagatg 76864561
Query: 896 gcaaaggccaggcagtacccctggggcgttgtgcagg 932
|||||||||||||||||||||||||||||||||||||
Sbjct: 76864562 gcaaaggccaggcagtacccctggggcgttgtgcagg 76864598
Score = 83.8 bits (42), Expect = 2e-13
Identities = 49/50 (98%), Gaps = 1/50 (2%)
Strand = Plus / Plus
Query: 932 gttgagaatgaaaaccat-gcgattttgtgaaactccgggagatgctgat 980
|||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 76865618 gttgagaatgaaaaccattgcgattttgtgaaactccgggagatgctgat 76865667
>Sscrofa_Chr02
|| Length = 162569375
Score = 127 bits (64), Expect = 1e-26
Identities = 157/188 (83%)
Strand = Plus / Minus
Query: 488 tacaagcccatagtggaatatatcgatgcccagtttgaagcctacttgcaagaggaattg 547
|||| |||||| || || || ||||| || ||||||||| |||| |||| ||||| ||
Sbjct: 140559477 tacaggcccatcgtcgactacatcgacgcgcagtttgaaaactacctgcaggaggagctg 140559418
Query: 548 aagatcaaacgttccctcttcaactaccacgacaccaggatccacgcctgtctctacttt 607
|||||| || || |||||| ||||||||||||| |||||||||| ||| ||||||||
Sbjct: 140559417 aagatccgccgctcgctcttcgactaccacgacacgaggatccacgtctgcctctacttc 140559358
Query: 608 atcgccccaaccgggcactcgctgaagtccctggacctggtcaccatgaagaagctggac 667
||| | || ||||||||||| || ||||||||||| ||||| ||||||||||| ||||||
Sbjct: 140559357 atcacgcccaccgggcactccctcaagtccctggatctggtgaccatgaagaaactggac 140559298
Query: 668 agcaaggt 675
||||||||
Sbjct: 140559297 agcaaggt 140559290
Score = 107 bits (54), Expect = 1e-20
Identities = 111/130 (85%)
Strand = Plus / Minus
Query: 672 aggtgaacatcattccaatcattgcaaaagccgacaccatcgccaagaacgaactgcaca 731
|||||||||||||||| |||||||| || || ||||||||| |||||| || || ||||
Sbjct: 140558280 aggtgaacatcattcccatcattgccaaggctgacaccatctccaagagtgagctccaca 140558221
Query: 732 agttcaagagtaagatcatgagtgaactggtcagcaatggcgtccagatatatcagttcc 791
||||||||| ||||||||| | || |||||||||||||| |||||||| || ||||| |
Sbjct: 140558220 agttcaagatcaagatcatgggcgagctggtcagcaatggggtccagatctaccagtttc 140558161
Query: 792 ccaccgatga 801
|||| |||||
Sbjct: 140558160 ccactgatga 140558151
Score = 63.9 bits (32), Expect = 2e-07
Identities = 59/68 (86%)
Strand = Plus / Minus
Query: 416 agcaacgtgcggctgaagttaaccatcgtggacaccgtgggcttcggagaccagataaat 475
|||||||||| ||| ||| | |||||||||||| ||||||||||||| || ||||| ||
Sbjct: 140559904 agcaacgtgcagcttaagctgaccatcgtggacgccgtgggcttcggggatcagatcaac 140559845
Query: 476 aaggatga 483
||||||||
Sbjct: 140559844 aaggatga 140559837
>Sscrofa_ChrX
|| Length = 144288218
Score = 73.8 bits (37), Expect = 2e-10
Identities = 88/105 (83%)
Strand = Plus / Plus
Query: 571 ctaccacgacaccaggatccacgcctgtctctactttatcgccccaaccgggcactcgct 630
|||||||||| || | ||||||||||| | ||||| |||||||| || || ||||| |
Sbjct: 113600240 ctaccacgactcccgcatccacgcctgcttgtacttcatcgcccccacgggtcactcctt 113600299
Query: 631 gaagtccctggacctggtcaccatgaagaagctggacagcaaggt 675
|||||| |||||||| || || ||||||||||||||||| |||||
Sbjct: 113600300 gaagtctctggacctagtgacgatgaagaagctggacagtaaggt 113600344
>Sscrofa_Chr03
|| Length = 144787322
Score = 73.8 bits (37), Expect = 2e-10
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 747 tcatgagtgaactggtcagcaatggcgtccagatatatcagttccccaccgatgaagaaa 806
||||||||||||||||||||||||| || |||||||| |||||||| || ||||| ||||
Sbjct: 47813261 tcatgagtgaactggtcagcaatggtgttcagatataccagttcccaacagatgatgaaa 47813320
Query: 807 c 807
|
Sbjct: 47813321 c 47813321
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 22,434,261
Number of extensions: 114
Number of successful extensions: 114
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 113
Number of HSP's successfully gapped: 12
Length of query: 980
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 959
Effective length of database: 2,808,413,156
Effective search space: 2693268216604
Effective search space used: 2693268216604
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 29 (58.0 bits)