Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-003420
(1087 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_777226.2| protein phosphatase 1G [Bos taurus]. 489 e-138
Alignment gi|NP_776855.1| protein phosphatase 1B [Bos taurus]. 117 2e-26
Alignment gi|XP_001789385.1| PREDICTED: protein phosphatase 1B-like [Bos ... 117 2e-26
Alignment gi|NP_776854.1| protein phosphatase 1A [Bos taurus]. 111 1e-24
Alignment gi|XP_002686361.1| PREDICTED: protein phosphatase 1A-like [Bos ... 109 5e-24
Alignment gi|XP_001250612.3| PREDICTED: protein phosphatase 1A-like [Bos ... 109 5e-24
Alignment gi|NP_001092588.1| protein phosphatase 1L [Bos taurus]. 97 2e-20
Alignment gi|NP_001069123.1| integrin-linked kinase-associated serine/thr... 89 5e-18
Alignment gi|XP_002694747.1| PREDICTED: protein phosphatase 1F-like [Bos ... 85 1e-16
Alignment gi|XP_875630.3| PREDICTED: protein phosphatase 1F-like [Bos tau... 85 1e-16
>ref|NP_777226.2| protein phosphatase 1G [Bos taurus].
Length = 543
Score = 489 bits (1259), Expect = e-138
Identities = 262/346 (75%), Positives = 266/346 (76%)
Frame = +1
Query: 40 LLHEEATMTIEELLTRYGQNCHKGAPHSKSGAGTGEEAGSQGLNGEAGPEDPSRETSSEE 219
LLHEEATMTIEELLTRYGQNCHKGAPHSKSGAGTGEE GSQGLNGEAGPEDPSRETS+EE
Sbjct: 144 LLHEEATMTIEELLTRYGQNCHKGAPHSKSGAGTGEEPGSQGLNGEAGPEDPSRETSAEE 203
Query: 220 NGPTAKAHTGLSSNSERXXXXXXXXXXXXXXXXXXXSCSSASDKLPRVAKSKFFXXXXXX 399
NGPTAKAHTGLSSNSE SCSSASDKLPRVAKSKFF
Sbjct: 204 NGPTAKAHTGLSSNSECGTEAGQGGEPGTPTGEAGPSCSSASDKLPRVAKSKFFEDSEDE 263
Query: 400 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMMVPGMEGKEEPG 579
MMVPGMEGKEEPG
Sbjct: 264 SDEAEEEEEDSEECSEEEDGYSSEEAENEEDEDDTEEAEEDDEEEE-MMVPGMEGKEEPG 322
Query: 580 SDSGTTAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGKV 759
SDSGTTAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGKV
Sbjct: 323 SDSGTTAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGKV 382
Query: 760 TMDGRVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLTDDHEFMVIACDGIW 939
TMDGRVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLTDDHEFMVIACDGIW
Sbjct: 383 TMDGRVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLTDDHEFMVIACDGIW 442
Query: 940 NVMSSQEIIDFIQSKISQRDENGELSVMSSIVEELLDQWLAQTLLG 1077
NVMSSQE+IDFIQSKISQRDENGEL ++SSIVEELLDQ LA G
Sbjct: 443 NVMSSQEVIDFIQSKISQRDENGELRLLSSIVEELLDQCLAPDTSG 488
>ref|NP_776855.1| protein phosphatase 1B [Bos taurus].
Length = 387
Score = 117 bits (293), Expect = 2e-26
Identities = 58/139 (41%), Positives = 91/139 (65%)
Frame = +1
Query: 586 SGTTAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGKVTM 765
SG+TAV +I K + N GDSR V+ +G+ + DHKP + E RI+NAGG V +
Sbjct: 130 SGSTAVGVMISPKHIYFINCGDSRAVLYRSGQVCFSTQDHKPCNPREKERIQNAGGSVMI 189
Query: 766 DGRVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLTDDHEFMVIACDGIWNV 945
RVNG L +SRA+GD+ YK P EQ++S P++ + ++ EF+++ACDGIW+V
Sbjct: 190 Q-RVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEILRAEEDEFIILACDGIWDV 248
Query: 946 MSSQEIIDFIQSKISQRDE 1002
MS++E+ +F++S++ D+
Sbjct: 249 MSNEELCEFVKSRLEVSDD 267
>ref|XP_001789385.1| PREDICTED: protein phosphatase 1B-like [Bos taurus].
Length = 375
Score = 117 bits (293), Expect = 2e-26
Identities = 58/139 (41%), Positives = 91/139 (65%)
Frame = +1
Query: 586 SGTTAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGKVTM 765
SG+TAV +I K + N GDSR V+ +G+ + DHKP + E RI+NAGG V +
Sbjct: 130 SGSTAVGVMISPKHIYFINCGDSRAVLYRSGQVCFSTQDHKPCNPREKERIQNAGGSVMI 189
Query: 766 DGRVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLTDDHEFMVIACDGIWNV 945
RVNG L +SRA+GD+ YK P EQ++S P++ + ++ EF+++ACDGIW+V
Sbjct: 190 Q-RVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEILRAEEDEFIILACDGIWDV 248
Query: 946 MSSQEIIDFIQSKISQRDE 1002
MS++E+ +F++S++ D+
Sbjct: 249 MSNEELCEFVKSRLEVSDD 267
>ref|NP_776854.1| protein phosphatase 1A [Bos taurus].
Length = 382
Score = 111 bits (278), Expect = 1e-24
Identities = 63/169 (37%), Positives = 98/169 (57%), Gaps = 1/169 (0%)
Frame = +1
Query: 556 MEGKEEPGSDSGTTAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELAR 735
M K+ SG+TAV LI + N GDSR ++ K + DHKP + +E R
Sbjct: 115 MSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVYFFTQDHKPSNPLEKER 174
Query: 736 IKNAGGKVTMDGRVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLT-DDHEF 912
I+NAGG V M RVNG L +SRA+GD YK P EQ++S P++ + + +D +F
Sbjct: 175 IQNAGGSV-MIQRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQF 233
Query: 913 MVIACDGIWNVMSSQEIIDFIQSKISQRDENGELSVMSSIVEELLDQWL 1059
+++ACDGIW+VM ++E+ DF++S++ D+ + + E++D L
Sbjct: 234 IILACDGIWDVMGNEELCDFVRSRLEVTDD------LEKVCNEVVDTCL 276
>ref|XP_002686361.1| PREDICTED: protein phosphatase 1A-like [Bos taurus].
Length = 308
Score = 109 bits (272), Expect = 5e-24
Identities = 63/169 (37%), Positives = 97/169 (57%), Gaps = 1/169 (0%)
Frame = +1
Query: 556 MEGKEEPGSDSGTTAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELAR 735
M K+ SG+TAV LI + N GDSR ++ K + DHKP + +E R
Sbjct: 42 MSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVYFFTQDHKPSNPLEKER 101
Query: 736 IKNAGGKVTMDGRVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLT-DDHEF 912
I+NAGG V M RVNG L +SRA+GD YK P EQ++S P++ + + +D +F
Sbjct: 102 IQNAGGSV-MIQRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQF 160
Query: 913 MVIACDGIWNVMSSQEIIDFIQSKISQRDENGELSVMSSIVEELLDQWL 1059
+++ACDGIW+VM ++E+ DF +S++ D+ + + E++D L
Sbjct: 161 IILACDGIWDVMGNEELCDFERSRLEVTDD------LEKVCNEVVDTCL 203
>ref|XP_001250612.3| PREDICTED: protein phosphatase 1A-like [Bos taurus].
Length = 309
Score = 109 bits (272), Expect = 5e-24
Identities = 63/169 (37%), Positives = 97/169 (57%), Gaps = 1/169 (0%)
Frame = +1
Query: 556 MEGKEEPGSDSGTTAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELAR 735
M K+ SG+TAV LI + N GDSR ++ K + DHKP + +E R
Sbjct: 43 MSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVYFFTQDHKPSNPLEKER 102
Query: 736 IKNAGGKVTMDGRVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLT-DDHEF 912
I+NAGG V M RVNG L +SRA+GD YK P EQ++S P++ + + +D +F
Sbjct: 103 IQNAGGSV-MIQRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQF 161
Query: 913 MVIACDGIWNVMSSQEIIDFIQSKISQRDENGELSVMSSIVEELLDQWL 1059
+++ACDGIW+VM ++E+ DF +S++ D+ + + E++D L
Sbjct: 162 IILACDGIWDVMGNEELCDFERSRLEVTDD------LEKVCNEVVDTCL 204
>ref|NP_001092588.1| protein phosphatase 1L [Bos taurus].
Length = 360
Score = 97.4 bits (241), Expect = 2e-20
Identities = 57/155 (36%), Positives = 91/155 (58%), Gaps = 6/155 (3%)
Frame = +1
Query: 583 DSGTTAVVALIRGKQLIVANAGDSRCVVSEA-GKALDMSYDHKPEDEVELARIKNAGGKV 759
++GTT ++AL+ K L VAN GDSR V+ + G A+ +S+DHKP E RIK AGG +
Sbjct: 190 EAGTTCLIALLSDKDLTVANVGDSRGVLCDKDGNAIPLSHDHKPYQLKERKRIKRAGGFI 249
Query: 760 TMDG--RVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLTDDH---EFMVIA 924
+ +G RV G L +SR++GD+ P + + +PD +LT D EFM++A
Sbjct: 250 SFNGSWRVQGILAMSRSLGDY---------PLKNLNVVIPDPDILTFDLDKLQPEFMILA 300
Query: 925 CDGIWNVMSSQEIIDFIQSKISQRDENGELSVMSS 1029
DG+W+ S++E + FI+ ++ + + V+ S
Sbjct: 301 SDGLWDAFSNEEAVRFIKDRLDEPHFGAKSIVLQS 335
>ref|NP_001069123.1| integrin-linked kinase-associated serine/threonine phosphatase 2C
[Bos taurus].
Length = 370
Score = 89.4 bits (220), Expect = 5e-18
Identities = 57/155 (36%), Positives = 86/155 (55%), Gaps = 11/155 (7%)
Frame = +1
Query: 568 EEPGSDSGTTAVVALIRGKQLIVANAGDSRCVV------SEAGKALDMSYDHKPEDEVEL 729
++P G+TA L L +AN GDSR ++ S+ AL +S +H P E
Sbjct: 187 QKPAWKDGSTATCVLAVDNTLYIANLGDSRAILCRYNEESQKHAALSLSKEHNPTQYEER 246
Query: 730 ARIKNAGGKVTMDGRVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLTDDHE 909
RI+ AGG V DGRV G L +SR+IGD YKR ++++PDI+ LT +
Sbjct: 247 MRIQKAGGNVR-DGRVLGVLEVSRSIGDGQYKRCG--------VTSVPDIRRCQLTPNDR 297
Query: 910 FMVIACDGIWNVMSSQEIIDFIQS-----KISQRD 999
F+++ACDG++ V + +E ++FI S KI +R+
Sbjct: 298 FILLACDGLFKVFTPEEAVNFILSCLEDEKIQRRE 332
>ref|XP_002694747.1| PREDICTED: protein phosphatase 1F-like [Bos taurus].
Length = 551
Score = 84.7 bits (208), Expect = 1e-16
Identities = 55/143 (38%), Positives = 81/143 (56%), Gaps = 2/143 (1%)
Frame = +1
Query: 586 SGTTAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGKVT- 762
SGTT V ALI G L VA GDS+ ++ G+A+ + H+PE + E RI+ GG V+
Sbjct: 375 SGTTGVCALIAGNTLHVAWLGDSQVLLVRQGQAVKLMEPHRPERQDEKDRIEALGGFVSH 434
Query: 763 MD-GRVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLTDDHEFMVIACDGIW 939
MD RVNG L +SRAIGD F K +S D LT E++++ACDG +
Sbjct: 435 MDCWRVNGTLAVSRAIGDVFQK---------PYVSGEADAASWELTGSEEYLLLACDGFF 485
Query: 940 NVMSSQEIIDFIQSKISQRDENG 1008
+V+ QE+ ++S+++ +G
Sbjct: 486 DVVPHQEVASLVRSRLAGPQGSG 508
>ref|XP_875630.3| PREDICTED: protein phosphatase 1F-like [Bos taurus].
Length = 542
Score = 84.7 bits (208), Expect = 1e-16
Identities = 55/143 (38%), Positives = 81/143 (56%), Gaps = 2/143 (1%)
Frame = +1
Query: 586 SGTTAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGKVT- 762
SGTT V ALI G L VA GDS+ ++ G+A+ + H+PE + E RI+ GG V+
Sbjct: 366 SGTTGVCALIAGNTLHVAWLGDSQVLLVRQGQAVKLMEPHRPERQDEKDRIEALGGFVSH 425
Query: 763 MD-GRVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLTDDHEFMVIACDGIW 939
MD RVNG L +SRAIGD F K +S D LT E++++ACDG +
Sbjct: 426 MDCWRVNGTLAVSRAIGDVFQK---------PYVSGEADAASWELTGSEEYLLLACDGFF 476
Query: 940 NVMSSQEIIDFIQSKISQRDENG 1008
+V+ QE+ ++S+++ +G
Sbjct: 477 DVVPHQEVASLVRSRLAGPQGSG 499
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.310 0.128 0.361
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 38,206,013
Number of extensions: 1166351
Number of successful extensions: 4755
Number of sequences better than 1.0e-05: 17
Number of HSP's gapped: 4675
Number of HSP's successfully gapped: 18
Length of query: 362
Length of database: 17,681,374
Length adjustment: 103
Effective length of query: 259
Effective length of database: 14,273,310
Effective search space: 3696787290
Effective search space used: 3696787290
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.3 bits)
S2: 35 (18.1 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-003420
(1087 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_532910.2| PREDICTED: similar to protein phosphatase 1G is... 486 e-137
Alignment gi|XP_861277.1| PREDICTED: similar to protein phosphatase 1G is... 476 e-134
Alignment gi|XP_861247.1| PREDICTED: similar to protein phosphatase 1G is... 473 e-133
Alignment gi|XP_861306.1| PREDICTED: similar to protein phosphatase 1G is... 456 e-128
Alignment gi|XP_864335.1| PREDICTED: similar to Protein phosphatase 2C be... 116 3e-26
Alignment gi|XP_864313.1| PREDICTED: similar to protein phosphatase 1B is... 116 3e-26
Alignment gi|XP_864293.1| PREDICTED: similar to Protein phosphatase 2C be... 116 3e-26
Alignment gi|XP_531801.2| PREDICTED: similar to Protein phosphatase 2C be... 116 3e-26
Alignment gi|XP_864247.1| PREDICTED: similar to Protein phosphatase 2C be... 116 3e-26
Alignment gi|XP_851683.1| PREDICTED: similar to Protein phosphatase 2C be... 116 3e-26
>ref|XP_532910.2| PREDICTED: similar to protein phosphatase 1G isoform 2 [Canis
familiaris].
Length = 544
Score = 486 bits (1252), Expect = e-137
Identities = 260/346 (75%), Positives = 263/346 (76%)
Frame = +1
Query: 40 LLHEEATMTIEELLTRYGQNCHKGAPHSKSGAGTGEEAGSQGLNGEAGPEDPSRETSSEE 219
LLHEEATMTIEELLTRYGQNCHKG PHSKSG GTGEE GSQGLNGEAGPEDPSRETSSEE
Sbjct: 144 LLHEEATMTIEELLTRYGQNCHKGVPHSKSGTGTGEEPGSQGLNGEAGPEDPSRETSSEE 203
Query: 220 NGPTAKAHTGLSSNSERXXXXXXXXXXXXXXXXXXXSCSSASDKLPRVAKSKFFXXXXXX 399
NGPT KAH GLSSNSER SCSSASDKLPRVAKSKFF
Sbjct: 204 NGPTIKAHAGLSSNSERGTEAGQGGEPGTPTGEAGPSCSSASDKLPRVAKSKFFEDSEDE 263
Query: 400 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMMVPGMEGKEEPG 579
MMVPGMEGKEEPG
Sbjct: 264 SDEAEEEEEDSEECSEEEDGYSSEEAENEEDEDDTEEAEEDEEEEE-MMVPGMEGKEEPG 322
Query: 580 SDSGTTAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGKV 759
SDSGTTAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGKV
Sbjct: 323 SDSGTTAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGKV 382
Query: 760 TMDGRVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLTDDHEFMVIACDGIW 939
TMDGRVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLTDDHEFMVIACDGIW
Sbjct: 383 TMDGRVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLTDDHEFMVIACDGIW 442
Query: 940 NVMSSQEIIDFIQSKISQRDENGELSVMSSIVEELLDQWLAQTLLG 1077
NVMSSQE+IDFIQSKISQRDENGEL ++SSIVEELLDQ LA G
Sbjct: 443 NVMSSQEVIDFIQSKISQRDENGELRLLSSIVEELLDQCLAPDTSG 488
>ref|XP_861277.1| PREDICTED: similar to protein phosphatase 1G isoform 5 [Canis
familiaris].
Length = 516
Score = 476 bits (1226), Expect = e-134
Identities = 253/334 (75%), Positives = 256/334 (76%)
Frame = +1
Query: 40 LLHEEATMTIEELLTRYGQNCHKGAPHSKSGAGTGEEAGSQGLNGEAGPEDPSRETSSEE 219
LLHEEATMTIEELLTRYGQNCHKG PHSKSG GTGEE GSQGLNGEAGPEDPSRETSSEE
Sbjct: 144 LLHEEATMTIEELLTRYGQNCHKGVPHSKSGTGTGEEPGSQGLNGEAGPEDPSRETSSEE 203
Query: 220 NGPTAKAHTGLSSNSERXXXXXXXXXXXXXXXXXXXSCSSASDKLPRVAKSKFFXXXXXX 399
NGPT KAH GLSSNSER SCSSASDKLPRVAKSKFF
Sbjct: 204 NGPTIKAHAGLSSNSERGTEAGQGGEPGTPTGEAGPSCSSASDKLPRVAKSKFFEDSEDE 263
Query: 400 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMMVPGMEGKEEPG 579
MMVPGMEGKEEPG
Sbjct: 264 SDEAEEEEEDSEECSEEEDGYSSEEAENEEDEDDTEEAEEDEEEEE-MMVPGMEGKEEPG 322
Query: 580 SDSGTTAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGKV 759
SDSGTTAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGKV
Sbjct: 323 SDSGTTAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGKV 382
Query: 760 TMDGRVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLTDDHEFMVIACDGIW 939
TMDGRVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLTDDHEFMVIACDGIW
Sbjct: 383 TMDGRVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLTDDHEFMVIACDGIW 442
Query: 940 NVMSSQEIIDFIQSKISQRDENGELSVMSSIVEE 1041
NVMSSQE+IDFIQSKISQRDENGEL ++SSIVEE
Sbjct: 443 NVMSSQEVIDFIQSKISQRDENGELRLLSSIVEE 476
>ref|XP_861247.1| PREDICTED: similar to protein phosphatase 1G isoform 4 [Canis
familiaris].
Length = 394
Score = 473 bits (1217), Expect = e-133
Identities = 253/339 (74%), Positives = 256/339 (75%)
Frame = +1
Query: 61 MTIEELLTRYGQNCHKGAPHSKSGAGTGEEAGSQGLNGEAGPEDPSRETSSEENGPTAKA 240
MTIEELLTRYGQNCHKG PHSKSG GTGEE GSQGLNGEAGPEDPSRETSSEENGPT KA
Sbjct: 1 MTIEELLTRYGQNCHKGVPHSKSGTGTGEEPGSQGLNGEAGPEDPSRETSSEENGPTIKA 60
Query: 241 HTGLSSNSERXXXXXXXXXXXXXXXXXXXSCSSASDKLPRVAKSKFFXXXXXXXXXXXXX 420
H GLSSNSER SCSSASDKLPRVAKSKFF
Sbjct: 61 HAGLSSNSERGTEAGQGGEPGTPTGEAGPSCSSASDKLPRVAKSKFFEDSEDESDEAEEE 120
Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMMVPGMEGKEEPGSDSGTTA 600
MMVPGMEGKEEPGSDSGTTA
Sbjct: 121 EEDSEECSEEEDGYSSEEAENEEDEDDTEEAEEDEEEEE-MMVPGMEGKEEPGSDSGTTA 179
Query: 601 VVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGKVTMDGRVN 780
VVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGKVTMDGRVN
Sbjct: 180 VVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGKVTMDGRVN 239
Query: 781 GGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLTDDHEFMVIACDGIWNVMSSQE 960
GGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLTDDHEFMVIACDGIWNVMSSQE
Sbjct: 240 GGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLTDDHEFMVIACDGIWNVMSSQE 299
Query: 961 IIDFIQSKISQRDENGELSVMSSIVEELLDQWLAQTLLG 1077
+IDFIQSKISQRDENGEL ++SSIVEELLDQ LA G
Sbjct: 300 VIDFIQSKISQRDENGELRLLSSIVEELLDQCLAPDTSG 338
>ref|XP_861306.1| PREDICTED: similar to protein phosphatase 1G isoform 6 [Canis
familiaris].
Length = 534
Score = 456 bits (1174), Expect = e-128
Identities = 249/346 (71%), Positives = 252/346 (72%)
Frame = +1
Query: 40 LLHEEATMTIEELLTRYGQNCHKGAPHSKSGAGTGEEAGSQGLNGEAGPEDPSRETSSEE 219
LLHEEATMTIEELLTRYGQNCHKG PHSKSG GTGEE GSQGLNGEAGPEDPSRETSSEE
Sbjct: 144 LLHEEATMTIEELLTRYGQNCHKGVPHSKSGTGTGEEPGSQGLNGEAGPEDPSRETSSEE 203
Query: 220 NGPTAKAHTGLSSNSERXXXXXXXXXXXXXXXXXXXSCSSASDKLPRVAKSKFFXXXXXX 399
NGPT KAH GLSSNSER SCSSASDKLPRVAKSKFF
Sbjct: 204 NGPTIKAHAGLSSNSERGTEAGQGGEPGTPTGEAGPSCSSASDKLPRVAKSKFFEDSEDE 263
Query: 400 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMMVPGMEGKEEPG 579
MMVPGMEGKEEPG
Sbjct: 264 SDEAEEEEEDSEECSEEEDGYSSEEAENEEDEDDTEEAEEDEEEEE-MMVPGMEGKEEPG 322
Query: 580 SDSGTTAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGKV 759
SDSGTTAVVALIRGKQLIVANAGDSR MSYDHKPEDEVELARIKNAGGKV
Sbjct: 323 SDSGTTAVVALIRGKQLIVANAGDSRY----------MSYDHKPEDEVELARIKNAGGKV 372
Query: 760 TMDGRVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLTDDHEFMVIACDGIW 939
TMDGRVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLTDDHEFMVIACDGIW
Sbjct: 373 TMDGRVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLTDDHEFMVIACDGIW 432
Query: 940 NVMSSQEIIDFIQSKISQRDENGELSVMSSIVEELLDQWLAQTLLG 1077
NVMSSQE+IDFIQSKISQRDENGEL ++SSIVEELLDQ LA G
Sbjct: 433 NVMSSQEVIDFIQSKISQRDENGELRLLSSIVEELLDQCLAPDTSG 478
>ref|XP_864335.1| PREDICTED: similar to Protein phosphatase 2C beta isoform (PP2C-beta)
isoform 9 [Canis familiaris].
Length = 479
Score = 116 bits (291), Expect = 3e-26
Identities = 59/139 (42%), Positives = 90/139 (64%)
Frame = +1
Query: 586 SGTTAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGKVTM 765
SG+TAV LI K + N GDSR V+ G+ + DHKP + E RI+NAGG V +
Sbjct: 130 SGSTAVGVLISPKHVYFINCGDSRAVLYRNGQVCFSTQDHKPCNPREKERIQNAGGSVMI 189
Query: 766 DGRVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLTDDHEFMVIACDGIWNV 945
RVNG L +SRA+GD+ YK P EQ++S P++ + ++ EF+++ACDGIW+V
Sbjct: 190 Q-RVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEILRAEEDEFIILACDGIWDV 248
Query: 946 MSSQEIIDFIQSKISQRDE 1002
MS++E+ +F++S++ D+
Sbjct: 249 MSNEELCEFVKSRLEVSDD 267
>ref|XP_864313.1| PREDICTED: similar to protein phosphatase 1B isoform 2 isoform 8
[Canis familiaris].
Length = 387
Score = 116 bits (291), Expect = 3e-26
Identities = 59/139 (42%), Positives = 90/139 (64%)
Frame = +1
Query: 586 SGTTAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGKVTM 765
SG+TAV LI K + N GDSR V+ G+ + DHKP + E RI+NAGG V +
Sbjct: 130 SGSTAVGVLISPKHVYFINCGDSRAVLYRNGQVCFSTQDHKPCNPREKERIQNAGGSVMI 189
Query: 766 DGRVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLTDDHEFMVIACDGIWNV 945
RVNG L +SRA+GD+ YK P EQ++S P++ + ++ EF+++ACDGIW+V
Sbjct: 190 Q-RVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEILRAEEDEFIILACDGIWDV 248
Query: 946 MSSQEIIDFIQSKISQRDE 1002
MS++E+ +F++S++ D+
Sbjct: 249 MSNEELCEFVKSRLEVSDD 267
>ref|XP_864293.1| PREDICTED: similar to Protein phosphatase 2C beta isoform (PP2C-beta)
isoform 7 [Canis familiaris].
Length = 389
Score = 116 bits (291), Expect = 3e-26
Identities = 59/139 (42%), Positives = 90/139 (64%)
Frame = +1
Query: 586 SGTTAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGKVTM 765
SG+TAV LI K + N GDSR V+ G+ + DHKP + E RI+NAGG V +
Sbjct: 130 SGSTAVGVLISPKHVYFINCGDSRAVLYRNGQVCFSTQDHKPCNPREKERIQNAGGSVMI 189
Query: 766 DGRVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLTDDHEFMVIACDGIWNV 945
RVNG L +SRA+GD+ YK P EQ++S P++ + ++ EF+++ACDGIW+V
Sbjct: 190 Q-RVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEILRAEEDEFIILACDGIWDV 248
Query: 946 MSSQEIIDFIQSKISQRDE 1002
MS++E+ +F++S++ D+
Sbjct: 249 MSNEELCEFVKSRLEVSDD 267
>ref|XP_531801.2| PREDICTED: similar to Protein phosphatase 2C beta isoform (PP2C-beta)
isoform 1 [Canis familiaris].
Length = 510
Score = 116 bits (291), Expect = 3e-26
Identities = 59/139 (42%), Positives = 90/139 (64%)
Frame = +1
Query: 586 SGTTAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGKVTM 765
SG+TAV LI K + N GDSR V+ G+ + DHKP + E RI+NAGG V +
Sbjct: 130 SGSTAVGVLISPKHVYFINCGDSRAVLYRNGQVCFSTQDHKPCNPREKERIQNAGGSVMI 189
Query: 766 DGRVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLTDDHEFMVIACDGIWNV 945
RVNG L +SRA+GD+ YK P EQ++S P++ + ++ EF+++ACDGIW+V
Sbjct: 190 Q-RVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEILRAEEDEFIILACDGIWDV 248
Query: 946 MSSQEIIDFIQSKISQRDE 1002
MS++E+ +F++S++ D+
Sbjct: 249 MSNEELCEFVKSRLEVSDD 267
>ref|XP_864247.1| PREDICTED: similar to Protein phosphatase 2C beta isoform (PP2C-beta)
isoform 6 [Canis familiaris].
Length = 512
Score = 116 bits (291), Expect = 3e-26
Identities = 59/139 (42%), Positives = 90/139 (64%)
Frame = +1
Query: 586 SGTTAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGKVTM 765
SG+TAV LI K + N GDSR V+ G+ + DHKP + E RI+NAGG V +
Sbjct: 130 SGSTAVGVLISPKHVYFINCGDSRAVLYRNGQVCFSTQDHKPCNPREKERIQNAGGSVMI 189
Query: 766 DGRVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLTDDHEFMVIACDGIWNV 945
RVNG L +SRA+GD+ YK P EQ++S P++ + ++ EF+++ACDGIW+V
Sbjct: 190 Q-RVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEILRAEEDEFIILACDGIWDV 248
Query: 946 MSSQEIIDFIQSKISQRDE 1002
MS++E+ +F++S++ D+
Sbjct: 249 MSNEELCEFVKSRLEVSDD 267
>ref|XP_851683.1| PREDICTED: similar to Protein phosphatase 2C beta isoform (PP2C-beta)
isoform 2 [Canis familiaris].
Length = 479
Score = 116 bits (291), Expect = 3e-26
Identities = 59/139 (42%), Positives = 90/139 (64%)
Frame = +1
Query: 586 SGTTAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGKVTM 765
SG+TAV LI K + N GDSR V+ G+ + DHKP + E RI+NAGG V +
Sbjct: 130 SGSTAVGVLISPKHVYFINCGDSRAVLYRNGQVCFSTQDHKPCNPREKERIQNAGGSVMI 189
Query: 766 DGRVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLTDDHEFMVIACDGIWNV 945
RVNG L +SRA+GD+ YK P EQ++S P++ + ++ EF+++ACDGIW+V
Sbjct: 190 Q-RVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEILRAEEDEFIILACDGIWDV 248
Query: 946 MSSQEIIDFIQSKISQRDE 1002
MS++E+ +F++S++ D+
Sbjct: 249 MSNEELCEFVKSRLEVSDD 267
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.310 0.128 0.361
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 38,948,010
Number of extensions: 1039158
Number of successful extensions: 4728
Number of sequences better than 1.0e-05: 29
Number of HSP's gapped: 4621
Number of HSP's successfully gapped: 33
Length of query: 362
Length of database: 18,874,504
Length adjustment: 104
Effective length of query: 258
Effective length of database: 15,407,560
Effective search space: 3975150480
Effective search space used: 3975150480
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.3 bits)
S2: 35 (18.1 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-003420
(1087 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_817092.1| protein phosphatase 1G [Homo sapiens]. 474 e-134
Alignment gi|NP_001028729.1| protein phosphatase 1B isoform 5 [Homo sapie... 115 9e-26
Alignment gi|NP_001028728.1| protein phosphatase 1B isoform 4 [Homo sapie... 115 9e-26
Alignment gi|NP_808907.1| protein phosphatase 1B isoform 2 [Homo sapiens]. 115 9e-26
Alignment gi|NP_002697.1| protein phosphatase 1B isoform 1 [Homo sapiens]. 115 9e-26
Alignment gi|NP_066283.1| protein phosphatase 1A isoform 1 [Homo sapiens]. 110 2e-24
Alignment gi|NP_808820.1| protein phosphatase 1A isoform 2 [Homo sapiens]. 110 2e-24
Alignment gi|NP_808821.2| protein phosphatase 1A isoform 3 [Homo sapiens]. 110 2e-24
Alignment gi|NP_001073870.1| probable protein phosphatase 1N [Homo sapien... 98 1e-20
Alignment gi|NP_640338.2| protein phosphatase 1L [Homo sapiens]. 97 2e-20
>ref|NP_817092.1| protein phosphatase 1G [Homo sapiens].
Length = 546
Score = 474 bits (1221), Expect = e-134
Identities = 254/347 (73%), Positives = 261/347 (75%), Gaps = 1/347 (0%)
Frame = +1
Query: 40 LLHEEATMTIEELLTRYGQNCHKGAPHSKSGAGTGEEAGSQGLNGEAGPEDPSRETSSEE 219
LLHEEATMTIEELLTRYGQNCHKG PHSKSG GTGEE GSQGLNGEAGPED +RET S+E
Sbjct: 144 LLHEEATMTIEELLTRYGQNCHKGPPHSKSGGGTGEEPGSQGLNGEAGPEDSTRETPSQE 203
Query: 220 NGPTAKAHTGLSSNSERXXXXXXXXXXXXXXXXXXXSCSSASDKLPRVAKSK-FFXXXXX 396
NGPTAKA+TG SSNSER SCSSASDKLPRVAKSK F
Sbjct: 204 NGPTAKAYTGFSSNSERGTEAGQVGEPGIPTGEAGPSCSSASDKLPRVAKSKFFEDSEDE 263
Query: 397 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMMVPGMEGKEEP 576
MMVPGMEGKEEP
Sbjct: 264 SDEAEEEEEDSEECSEEEDGYSSEEAENEEDEDDTEEAEEDDEEEEEEMMVPGMEGKEEP 323
Query: 577 GSDSGTTAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGK 756
GSDSGTTAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGK
Sbjct: 324 GSDSGTTAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGK 383
Query: 757 VTMDGRVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLTDDHEFMVIACDGI 936
VTMDGRVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLTDDHEFMVIACDGI
Sbjct: 384 VTMDGRVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLTDDHEFMVIACDGI 443
Query: 937 WNVMSSQEIIDFIQSKISQRDENGELSVMSSIVEELLDQWLAQTLLG 1077
WNVMSSQE++DFIQSKISQRDENGEL ++SSIVEELLDQ LA G
Sbjct: 444 WNVMSSQEVVDFIQSKISQRDENGELRLLSSIVEELLDQCLAPDTSG 490
>ref|NP_001028729.1| protein phosphatase 1B isoform 5 [Homo sapiens].
Length = 380
Score = 115 bits (287), Expect = 9e-26
Identities = 57/139 (41%), Positives = 90/139 (64%)
Frame = +1
Query: 586 SGTTAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGKVTM 765
SG+TAV +I K + N GDSR V+ G+ + DHKP + E RI+NAGG V +
Sbjct: 130 SGSTAVGVMISPKHIYFINCGDSRAVLYRNGQVCFSTQDHKPCNPREKERIQNAGGSVMI 189
Query: 766 DGRVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLTDDHEFMVIACDGIWNV 945
RVNG L +SRA+GD+ YK P EQ++S P++ + ++ EF+++ACDGIW+V
Sbjct: 190 Q-RVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEILRAEEDEFIILACDGIWDV 248
Query: 946 MSSQEIIDFIQSKISQRDE 1002
MS++E+ ++++S++ D+
Sbjct: 249 MSNEELCEYVKSRLEVSDD 267
>ref|NP_001028728.1| protein phosphatase 1B isoform 4 [Homo sapiens].
Length = 327
Score = 115 bits (287), Expect = 9e-26
Identities = 57/139 (41%), Positives = 90/139 (64%)
Frame = +1
Query: 586 SGTTAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGKVTM 765
SG+TAV +I K + N GDSR V+ G+ + DHKP + E RI+NAGG V +
Sbjct: 130 SGSTAVGVMISPKHIYFINCGDSRAVLYRNGQVCFSTQDHKPCNPREKERIQNAGGSVMI 189
Query: 766 DGRVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLTDDHEFMVIACDGIWNV 945
RVNG L +SRA+GD+ YK P EQ++S P++ + ++ EF+++ACDGIW+V
Sbjct: 190 Q-RVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEILRAEEDEFIILACDGIWDV 248
Query: 946 MSSQEIIDFIQSKISQRDE 1002
MS++E+ ++++S++ D+
Sbjct: 249 MSNEELCEYVKSRLEVSDD 267
>ref|NP_808907.1| protein phosphatase 1B isoform 2 [Homo sapiens].
Length = 387
Score = 115 bits (287), Expect = 9e-26
Identities = 57/139 (41%), Positives = 90/139 (64%)
Frame = +1
Query: 586 SGTTAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGKVTM 765
SG+TAV +I K + N GDSR V+ G+ + DHKP + E RI+NAGG V +
Sbjct: 130 SGSTAVGVMISPKHIYFINCGDSRAVLYRNGQVCFSTQDHKPCNPREKERIQNAGGSVMI 189
Query: 766 DGRVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLTDDHEFMVIACDGIWNV 945
RVNG L +SRA+GD+ YK P EQ++S P++ + ++ EF+++ACDGIW+V
Sbjct: 190 Q-RVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEILRAEEDEFIILACDGIWDV 248
Query: 946 MSSQEIIDFIQSKISQRDE 1002
MS++E+ ++++S++ D+
Sbjct: 249 MSNEELCEYVKSRLEVSDD 267
>ref|NP_002697.1| protein phosphatase 1B isoform 1 [Homo sapiens].
Length = 479
Score = 115 bits (287), Expect = 9e-26
Identities = 57/139 (41%), Positives = 90/139 (64%)
Frame = +1
Query: 586 SGTTAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGKVTM 765
SG+TAV +I K + N GDSR V+ G+ + DHKP + E RI+NAGG V +
Sbjct: 130 SGSTAVGVMISPKHIYFINCGDSRAVLYRNGQVCFSTQDHKPCNPREKERIQNAGGSVMI 189
Query: 766 DGRVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLTDDHEFMVIACDGIWNV 945
RVNG L +SRA+GD+ YK P EQ++S P++ + ++ EF+++ACDGIW+V
Sbjct: 190 Q-RVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEILRAEEDEFIILACDGIWDV 248
Query: 946 MSSQEIIDFIQSKISQRDE 1002
MS++E+ ++++S++ D+
Sbjct: 249 MSNEELCEYVKSRLEVSDD 267
>ref|NP_066283.1| protein phosphatase 1A isoform 1 [Homo sapiens].
Length = 382
Score = 110 bits (276), Expect = 2e-24
Identities = 63/169 (37%), Positives = 98/169 (57%), Gaps = 1/169 (0%)
Frame = +1
Query: 556 MEGKEEPGSDSGTTAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELAR 735
M K+ SG+TAV LI + N GDSR ++ K + DHKP + +E R
Sbjct: 115 MSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKER 174
Query: 736 IKNAGGKVTMDGRVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLT-DDHEF 912
I+NAGG V M RVNG L +SRA+GD YK P EQ++S P++ + + +D +F
Sbjct: 175 IQNAGGSV-MIQRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQF 233
Query: 913 MVIACDGIWNVMSSQEIIDFIQSKISQRDENGELSVMSSIVEELLDQWL 1059
+++ACDGIW+VM ++E+ DF++S++ D+ + + E++D L
Sbjct: 234 IILACDGIWDVMGNEELCDFVRSRLEVTDD------LEKVCNEVVDTCL 276
>ref|NP_808820.1| protein phosphatase 1A isoform 2 [Homo sapiens].
Length = 324
Score = 110 bits (276), Expect = 2e-24
Identities = 63/169 (37%), Positives = 98/169 (57%), Gaps = 1/169 (0%)
Frame = +1
Query: 556 MEGKEEPGSDSGTTAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELAR 735
M K+ SG+TAV LI + N GDSR ++ K + DHKP + +E R
Sbjct: 115 MSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKER 174
Query: 736 IKNAGGKVTMDGRVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLT-DDHEF 912
I+NAGG V M RVNG L +SRA+GD YK P EQ++S P++ + + +D +F
Sbjct: 175 IQNAGGSV-MIQRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQF 233
Query: 913 MVIACDGIWNVMSSQEIIDFIQSKISQRDENGELSVMSSIVEELLDQWL 1059
+++ACDGIW+VM ++E+ DF++S++ D+ + + E++D L
Sbjct: 234 IILACDGIWDVMGNEELCDFVRSRLEVTDD------LEKVCNEVVDTCL 276
>ref|NP_808821.2| protein phosphatase 1A isoform 3 [Homo sapiens].
Length = 455
Score = 110 bits (276), Expect = 2e-24
Identities = 63/169 (37%), Positives = 98/169 (57%), Gaps = 1/169 (0%)
Frame = +1
Query: 556 MEGKEEPGSDSGTTAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELAR 735
M K+ SG+TAV LI + N GDSR ++ K + DHKP + +E R
Sbjct: 188 MSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKER 247
Query: 736 IKNAGGKVTMDGRVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLT-DDHEF 912
I+NAGG V M RVNG L +SRA+GD YK P EQ++S P++ + + +D +F
Sbjct: 248 IQNAGGSV-MIQRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQF 306
Query: 913 MVIACDGIWNVMSSQEIIDFIQSKISQRDENGELSVMSSIVEELLDQWL 1059
+++ACDGIW+VM ++E+ DF++S++ D+ + + E++D L
Sbjct: 307 IILACDGIWDVMGNEELCDFVRSRLEVTDD------LEKVCNEVVDTCL 349
>ref|NP_001073870.1| probable protein phosphatase 1N [Homo sapiens].
Length = 430
Score = 98.2 bits (243), Expect = 1e-20
Identities = 53/133 (39%), Positives = 77/133 (57%)
Frame = +1
Query: 589 GTTAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGKVTMD 768
G TAVV L+ + L +A+ GDSR V+S AG + DH+P E RI AGG +
Sbjct: 162 GCTAVVLLVSPRFLYLAHCGDSRAVLSRAGAVAFSTEDHRPLRPRERERIHAAGGTIRRR 221
Query: 769 GRVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLTDDHEFMVIACDGIWNVM 948
RV G L +SRA+GD YK PPE Q++SA P++ L + EFM++A DG+W+ +
Sbjct: 222 -RVEGSLAVSRALGDFTYKEAPGRPPELQLVSAEPEVAALARQAEDEFMLLASDGVWDTV 280
Query: 949 SSQEIIDFIQSKI 987
S + + S++
Sbjct: 281 SGAALAGLVASRL 293
>ref|NP_640338.2| protein phosphatase 1L [Homo sapiens].
Length = 360
Score = 97.4 bits (241), Expect = 2e-20
Identities = 57/155 (36%), Positives = 91/155 (58%), Gaps = 6/155 (3%)
Frame = +1
Query: 583 DSGTTAVVALIRGKQLIVANAGDSRCVVSEA-GKALDMSYDHKPEDEVELARIKNAGGKV 759
++GTT ++AL+ K L VAN GDSR V+ + G A+ +S+DHKP E RIK AGG +
Sbjct: 190 EAGTTCLIALLSDKDLTVANVGDSRGVLCDKDGNAIPLSHDHKPYQLKERKRIKRAGGFI 249
Query: 760 TMDG--RVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLTDDH---EFMVIA 924
+ +G RV G L +SR++GD+ P + + +PD +LT D EFM++A
Sbjct: 250 SFNGSWRVQGILAMSRSLGDY---------PLKNLNVVIPDPDILTFDLDKLQPEFMILA 300
Query: 925 CDGIWNVMSSQEIIDFIQSKISQRDENGELSVMSS 1029
DG+W+ S++E + FI+ ++ + + V+ S
Sbjct: 301 SDGLWDAFSNEEAVRFIKERLDEPHFGAKSIVLQS 335
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.310 0.128 0.361
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 38,338,628
Number of extensions: 1020990
Number of successful extensions: 4955
Number of sequences better than 1.0e-05: 22
Number of HSP's gapped: 4868
Number of HSP's successfully gapped: 23
Length of query: 362
Length of database: 18,297,164
Length adjustment: 104
Effective length of query: 258
Effective length of database: 14,868,908
Effective search space: 3836178264
Effective search space used: 3836178264
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.3 bits)
S2: 35 (18.1 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-003420
(1087 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_032040.1| protein phosphatase 1G [Mus musculus]. 469 e-132
Alignment gi|NP_001152970.1| protein phosphatase 1B isoform 4 [Mus muscul... 117 2e-26
Alignment gi|NP_001152969.1| protein phosphatase 1B isoform 3 [Mus muscul... 117 2e-26
Alignment gi|NP_001152968.1| protein phosphatase 1B isoform 1 [Mus muscul... 117 2e-26
Alignment gi|NP_035281.1| protein phosphatase 1B isoform 2 [Mus musculus]. 117 2e-26
Alignment gi|NP_032936.1| protein phosphatase 1A [Mus musculus]. 110 1e-24
Alignment gi|NP_808359.1| probable protein phosphatase 1N [Mus musculus]. 103 2e-22
Alignment gi|NP_848841.2| protein phosphatase 1L [Mus musculus]. 97 2e-20
Alignment gi|NP_075832.1| integrin-linked kinase-associated serine/threon... 88 1e-17
Alignment gi|NP_789803.1| protein phosphatase 1F [Mus musculus]. 84 1e-16
>ref|NP_032040.1| protein phosphatase 1G [Mus musculus].
Length = 542
Score = 469 bits (1207), Expect = e-132
Identities = 250/346 (72%), Positives = 258/346 (74%)
Frame = +1
Query: 40 LLHEEATMTIEELLTRYGQNCHKGAPHSKSGAGTGEEAGSQGLNGEAGPEDPSRETSSEE 219
LLHEEATMTIEELLTRYGQNC K PH+KSG GTG+E G QGLNGEAGPEDPSRET S+E
Sbjct: 144 LLHEEATMTIEELLTRYGQNCQKVPPHTKSGIGTGDEPGPQGLNGEAGPEDPSRETPSQE 203
Query: 220 NGPTAKAHTGLSSNSERXXXXXXXXXXXXXXXXXXXSCSSASDKLPRVAKSKFFXXXXXX 399
NGPTAK HTG SSNSE SCSSASDKLPRVAKSKFF
Sbjct: 204 NGPTAKGHTGFSSNSEHGTEAGQISEPGTATGEAGPSCSSASDKLPRVAKSKFFEDSEDE 263
Query: 400 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMMVPGMEGKEEPG 579
MMVPGMEGKEEPG
Sbjct: 264 SDEVEEEEDDSEECSEDEDGYSSEEAENEEDEDDTEEAEEDDDEE--MMVPGMEGKEEPG 321
Query: 580 SDSGTTAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGKV 759
SDSGTTAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGKV
Sbjct: 322 SDSGTTAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGKV 381
Query: 760 TMDGRVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLTDDHEFMVIACDGIW 939
TMDGRVNGGLNLSRAIGDHFYKRNKNLPP+EQMISALPDIKVLTLTDDHEFMVIACDGIW
Sbjct: 382 TMDGRVNGGLNLSRAIGDHFYKRNKNLPPQEQMISALPDIKVLTLTDDHEFMVIACDGIW 441
Query: 940 NVMSSQEIIDFIQSKISQRDENGELSVMSSIVEELLDQWLAQTLLG 1077
NVMSSQE++DFIQSKISQRDENGEL ++SSIVEELLDQ LA G
Sbjct: 442 NVMSSQEVVDFIQSKISQRDENGELRLLSSIVEELLDQCLAPDTSG 487
>ref|NP_001152970.1| protein phosphatase 1B isoform 4 [Mus musculus].
Length = 393
Score = 117 bits (293), Expect = 2e-26
Identities = 58/139 (41%), Positives = 90/139 (64%)
Frame = +1
Query: 586 SGTTAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGKVTM 765
SG+TAV ++ + N GDSR V+ G+ + DHKP + VE RI+NAGG V +
Sbjct: 130 SGSTAVGVMVSPTHMYFINCGDSRAVLCRNGQVCFSTQDHKPCNPVEKERIQNAGGSVMI 189
Query: 766 DGRVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLTDDHEFMVIACDGIWNV 945
RVNG L +SRA+GD+ YK P EQ++S P++ + ++ EF+V+ACDGIW+V
Sbjct: 190 Q-RVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEIVRAEEDEFVVLACDGIWDV 248
Query: 946 MSSQEIIDFIQSKISQRDE 1002
MS++E+ +F++S++ D+
Sbjct: 249 MSNEELCEFVKSRLEVSDD 267
>ref|NP_001152969.1| protein phosphatase 1B isoform 3 [Mus musculus].
Length = 390
Score = 117 bits (293), Expect = 2e-26
Identities = 58/139 (41%), Positives = 90/139 (64%)
Frame = +1
Query: 586 SGTTAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGKVTM 765
SG+TAV ++ + N GDSR V+ G+ + DHKP + VE RI+NAGG V +
Sbjct: 130 SGSTAVGVMVSPTHMYFINCGDSRAVLCRNGQVCFSTQDHKPCNPVEKERIQNAGGSVMI 189
Query: 766 DGRVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLTDDHEFMVIACDGIWNV 945
RVNG L +SRA+GD+ YK P EQ++S P++ + ++ EF+V+ACDGIW+V
Sbjct: 190 Q-RVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEIVRAEEDEFVVLACDGIWDV 248
Query: 946 MSSQEIIDFIQSKISQRDE 1002
MS++E+ +F++S++ D+
Sbjct: 249 MSNEELCEFVKSRLEVSDD 267
>ref|NP_001152968.1| protein phosphatase 1B isoform 1 [Mus musculus].
Length = 477
Score = 117 bits (293), Expect = 2e-26
Identities = 58/139 (41%), Positives = 90/139 (64%)
Frame = +1
Query: 586 SGTTAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGKVTM 765
SG+TAV ++ + N GDSR V+ G+ + DHKP + VE RI+NAGG V +
Sbjct: 130 SGSTAVGVMVSPTHMYFINCGDSRAVLCRNGQVCFSTQDHKPCNPVEKERIQNAGGSVMI 189
Query: 766 DGRVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLTDDHEFMVIACDGIWNV 945
RVNG L +SRA+GD+ YK P EQ++S P++ + ++ EF+V+ACDGIW+V
Sbjct: 190 Q-RVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEIVRAEEDEFVVLACDGIWDV 248
Query: 946 MSSQEIIDFIQSKISQRDE 1002
MS++E+ +F++S++ D+
Sbjct: 249 MSNEELCEFVKSRLEVSDD 267
>ref|NP_035281.1| protein phosphatase 1B isoform 2 [Mus musculus].
Length = 390
Score = 117 bits (293), Expect = 2e-26
Identities = 58/139 (41%), Positives = 90/139 (64%)
Frame = +1
Query: 586 SGTTAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGKVTM 765
SG+TAV ++ + N GDSR V+ G+ + DHKP + VE RI+NAGG V +
Sbjct: 130 SGSTAVGVMVSPTHMYFINCGDSRAVLCRNGQVCFSTQDHKPCNPVEKERIQNAGGSVMI 189
Query: 766 DGRVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLTDDHEFMVIACDGIWNV 945
RVNG L +SRA+GD+ YK P EQ++S P++ + ++ EF+V+ACDGIW+V
Sbjct: 190 Q-RVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEIVRAEEDEFVVLACDGIWDV 248
Query: 946 MSSQEIIDFIQSKISQRDE 1002
MS++E+ +F++S++ D+
Sbjct: 249 MSNEELCEFVKSRLEVSDD 267
>ref|NP_032936.1| protein phosphatase 1A [Mus musculus].
Length = 382
Score = 110 bits (276), Expect = 1e-24
Identities = 63/169 (37%), Positives = 98/169 (57%), Gaps = 1/169 (0%)
Frame = +1
Query: 556 MEGKEEPGSDSGTTAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELAR 735
M K+ SG+TAV LI + N GDSR ++ K + DHKP + +E R
Sbjct: 115 MSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKER 174
Query: 736 IKNAGGKVTMDGRVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLT-DDHEF 912
I+NAGG V M RVNG L +SRA+GD YK P EQ++S P++ + + +D +F
Sbjct: 175 IQNAGGSV-MIQRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQF 233
Query: 913 MVIACDGIWNVMSSQEIIDFIQSKISQRDENGELSVMSSIVEELLDQWL 1059
+++ACDGIW+VM ++E+ DF++S++ D+ + + E++D L
Sbjct: 234 IILACDGIWDVMGNEELCDFVRSRLEVTDD------LEKVCNEVVDTCL 276
>ref|NP_808359.1| probable protein phosphatase 1N [Mus musculus].
Length = 404
Score = 103 bits (257), Expect = 2e-22
Identities = 52/137 (37%), Positives = 82/137 (59%)
Frame = +1
Query: 577 GSDSGTTAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGK 756
G G+TAV L+ + L +A+ GDSR ++S +G + DH+P E RI +AGG
Sbjct: 151 GDPGGSTAVALLVSPRFLYLAHCGDSRALLSRSGSVAFCTEDHRPHRPRERERIHDAGGT 210
Query: 757 VTMDGRVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLTDDHEFMVIACDGI 936
V RV G L +SRA+GD YK+ PPE Q++SA P++ L D+ EF+++A DG+
Sbjct: 211 VRRR-RVEGSLAVSRALGDFAYKQAPGRPPELQLVSAEPEVAALARQDEDEFVLLASDGV 269
Query: 937 WNVMSSQEIIDFIQSKI 987
W+ +S ++ + S++
Sbjct: 270 WDALSGADLAGLVTSRL 286
>ref|NP_848841.2| protein phosphatase 1L [Mus musculus].
Length = 360
Score = 97.4 bits (241), Expect = 2e-20
Identities = 57/155 (36%), Positives = 91/155 (58%), Gaps = 6/155 (3%)
Frame = +1
Query: 583 DSGTTAVVALIRGKQLIVANAGDSRCVVSEA-GKALDMSYDHKPEDEVELARIKNAGGKV 759
++GTT ++AL+ K L VAN GDSR V+ + G A+ +S+DHKP E RIK AGG +
Sbjct: 190 EAGTTCLIALLSDKDLTVANVGDSRGVLCDKDGNAIPLSHDHKPYQLKERKRIKRAGGFI 249
Query: 760 TMDG--RVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLTDDH---EFMVIA 924
+ +G RV G L +SR++GD+ P + + +PD +LT D EFM++A
Sbjct: 250 SFNGSWRVQGILAMSRSLGDY---------PLKNLNVVIPDPDILTFDLDKLQPEFMILA 300
Query: 925 CDGIWNVMSSQEIIDFIQSKISQRDENGELSVMSS 1029
DG+W+ S++E + FI+ ++ + + V+ S
Sbjct: 301 SDGLWDAFSNEEAVRFIKERLDEPHFGAKSIVLQS 335
>ref|NP_075832.1| integrin-linked kinase-associated serine/threonine phosphatase 2C
[Mus musculus].
Length = 392
Score = 88.2 bits (217), Expect = 1e-17
Identities = 54/144 (37%), Positives = 81/144 (56%), Gaps = 6/144 (4%)
Frame = +1
Query: 568 EEPGSDSGTTAVVALIRGKQLIVANAGDSRCVV------SEAGKALDMSYDHKPEDEVEL 729
++P G+TA L L +AN GDSR ++ S+ AL +S +H P E
Sbjct: 209 QKPAWKDGSTATCVLAVDNILYIANLGDSRAILCRYNEESQKHAALSLSKEHNPTQYEER 268
Query: 730 ARIKNAGGKVTMDGRVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLTDDHE 909
RI+ AGG V DGRV G L +SR+IGD YKR ++++PDI+ LT +
Sbjct: 269 MRIQKAGGNVR-DGRVLGVLEVSRSIGDGQYKRCG--------VTSVPDIRRCQLTPNDR 319
Query: 910 FMVIACDGIWNVMSSQEIIDFIQS 981
F+++ACDG++ V + +E ++FI S
Sbjct: 320 FILLACDGLFKVFTPEEAVNFILS 343
>ref|NP_789803.1| protein phosphatase 1F [Mus musculus].
Length = 452
Score = 84.3 bits (207), Expect = 1e-16
Identities = 58/156 (37%), Positives = 83/156 (53%), Gaps = 2/156 (1%)
Frame = +1
Query: 586 SGTTAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGKVT- 762
SGTT V ALI G L VA GDS+ ++ + G+ + + HKPE + E ARI+ GG V+
Sbjct: 250 SGTTGVCALIAGAALHVAWLGDSQVILVQQGRVVKLMEPHKPERQDEKARIEALGGFVSL 309
Query: 763 MD-GRVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLTDDHEFMVIACDGIW 939
MD RVNG L +SRAIGD F K +S D LT +++++ACDG +
Sbjct: 310 MDCWRVNGTLAVSRAIGDVFQK---------PYVSGEADAASRELTGSEDYLLLACDGFF 360
Query: 940 NVMSSQEIIDFIQSKISQRDENGELSVMSSIVEELL 1047
+V+ E+ + + + NG I EEL+
Sbjct: 361 DVVPHHEVTGLVHGHLLRHKGNG-----MRIAEELV 391
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.310 0.128 0.361
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 32,514,736
Number of extensions: 862592
Number of successful extensions: 3957
Number of sequences better than 1.0e-05: 18
Number of HSP's gapped: 3889
Number of HSP's successfully gapped: 19
Length of query: 362
Length of database: 15,617,559
Length adjustment: 103
Effective length of query: 259
Effective length of database: 12,523,851
Effective search space: 3243677409
Effective search space used: 3243677409
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.3 bits)
S2: 34 (17.7 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-003420
(1087 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_003125227.1| PREDICTED: LOW QUALITY PROTEIN: protein phos... 116 2e-26
Alignment gi|XP_003353545.1| PREDICTED: hypothetical protein LOC100623395... 110 1e-24
Alignment gi|XP_003358705.1| PREDICTED: protein phosphatase 1L-like [Sus ... 97 1e-20
Alignment gi|XP_003133820.2| PREDICTED: integrin-linked kinase-associated... 88 7e-18
Alignment gi|XP_001926892.2| PREDICTED: protein phosphatase 1F [Sus scrof... 83 2e-16
Alignment gi|XP_003131709.1| PREDICTED: protein phosphatase 1E [Sus scrof... 81 9e-16
Alignment gi|XP_003362203.1| PREDICTED: [Pyruvate dehydrogenase [acetyl-t... 60 2e-09
Alignment gi|XP_001924873.3| PREDICTED: Pyruvate dehydrogenase [acetyl-tr... 60 3e-09
Alignment gi|XP_003359225.1| PREDICTED: protein phosphatase 1F-like [Sus ... 55 5e-08
Alignment gi|XP_001925065.3| PREDICTED: PH domain leucine-rich repeat-con... 55 5e-08
>ref|XP_003125227.1| PREDICTED: LOW QUALITY PROTEIN: protein phosphatase 1B-like [Sus
scrofa].
Length = 479
Score = 116 bits (290), Expect = 2e-26
Identities = 58/139 (41%), Positives = 90/139 (64%)
Frame = +1
Query: 586 SGTTAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGKVTM 765
SG+TAV +I K + N GDSR V+ G+ + DHKP + E RI+NAGG V +
Sbjct: 130 SGSTAVGVMISPKHIYFINCGDSRAVLYRNGQVCFSTQDHKPCNPREKERIQNAGGSVMI 189
Query: 766 DGRVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLTDDHEFMVIACDGIWNV 945
RVNG L +SRA+GD+ YK P EQ++S P++ + ++ EF+++ACDGIW+V
Sbjct: 190 Q-RVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEILRAEEDEFIILACDGIWDV 248
Query: 946 MSSQEIIDFIQSKISQRDE 1002
MS++E+ +F++S++ D+
Sbjct: 249 MSNEELCEFVKSRLEVSDD 267
>ref|XP_003353545.1| PREDICTED: hypothetical protein LOC100623395 [Sus scrofa].
Length = 682
Score = 110 bits (276), Expect = 1e-24
Identities = 63/169 (37%), Positives = 98/169 (57%), Gaps = 1/169 (0%)
Frame = +1
Query: 556 MEGKEEPGSDSGTTAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELAR 735
M K+ SG+TAV LI + N GDSR ++ K + DHKP + +E R
Sbjct: 166 MSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKER 225
Query: 736 IKNAGGKVTMDGRVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLT-DDHEF 912
I+NAGG V M RVNG L +SRA+GD YK P EQ++S P++ + + +D +F
Sbjct: 226 IQNAGGSV-MIQRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQF 284
Query: 913 MVIACDGIWNVMSSQEIIDFIQSKISQRDENGELSVMSSIVEELLDQWL 1059
+++ACDGIW+VM ++E+ DF++S++ D+ + + E++D L
Sbjct: 285 IILACDGIWDVMGNEELCDFVRSRLEVTDD------LEKVCNEVVDTCL 327
>ref|XP_003358705.1| PREDICTED: protein phosphatase 1L-like [Sus scrofa].
Length = 241
Score = 97.4 bits (241), Expect = 1e-20
Identities = 57/155 (36%), Positives = 91/155 (58%), Gaps = 6/155 (3%)
Frame = +1
Query: 583 DSGTTAVVALIRGKQLIVANAGDSRCVVSEA-GKALDMSYDHKPEDEVELARIKNAGGKV 759
++GTT ++AL+ K L VAN GDSR V+ + G A+ +S+DHKP E RIK AGG +
Sbjct: 71 EAGTTCLIALLSDKDLTVANVGDSRGVLCDKDGNAIPLSHDHKPYQLKERKRIKRAGGFI 130
Query: 760 TMDG--RVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLTDDH---EFMVIA 924
+ +G RV G L +SR++GD+ P + + +PD +LT D EFM++A
Sbjct: 131 SFNGSWRVQGILAMSRSLGDY---------PLKNLNVVIPDPDILTFDLDKLQPEFMILA 181
Query: 925 CDGIWNVMSSQEIIDFIQSKISQRDENGELSVMSS 1029
DG+W+ S++E + FI+ ++ + + V+ S
Sbjct: 182 SDGLWDAFSNEEAVRFIKDRLDEPHFGAKSIVLQS 216
>ref|XP_003133820.2| PREDICTED: integrin-linked kinase-associated serine/threonine
phosphatase 2C isoform 1 [Sus scrofa].
Length = 348
Score = 88.2 bits (217), Expect = 7e-18
Identities = 54/144 (37%), Positives = 80/144 (55%), Gaps = 6/144 (4%)
Frame = +1
Query: 568 EEPGSDSGTTAVVALIRGKQLIVANAGDSRCVV------SEAGKALDMSYDHKPEDEVEL 729
++P G+TA L L +AN GDSR ++ S+ AL +S +H P E
Sbjct: 165 QKPAWKDGSTATCVLAVDNTLYIANLGDSRAILCRYNEESQKHAALSLSKEHNPTQYEER 224
Query: 730 ARIKNAGGKVTMDGRVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLTDDHE 909
RI+ AGG V DGRV G L +SR+IGD YKR ++++PDI+ LT +
Sbjct: 225 MRIQKAGGNVR-DGRVLGVLEVSRSIGDGQYKRCG--------VTSVPDIRRCQLTPNDR 275
Query: 910 FMVIACDGIWNVMSSQEIIDFIQS 981
F+++ACDG++ V + +E + FI S
Sbjct: 276 FILLACDGLFKVFTPEEAVHFILS 299
>ref|XP_001926892.2| PREDICTED: protein phosphatase 1F [Sus scrofa].
Length = 436
Score = 83.2 bits (204), Expect = 2e-16
Identities = 56/156 (35%), Positives = 87/156 (55%), Gaps = 2/156 (1%)
Frame = +1
Query: 586 SGTTAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGKVT- 762
SGTT V ALI G L VA GDS+ ++ + G+ + + H+PE + E RI+ GG V+
Sbjct: 249 SGTTGVCALIAGSTLHVAWLGDSQVLLVQQGQVVKLMEPHRPERQDEKDRIEALGGFVSH 308
Query: 763 MD-GRVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLTDDHEFMVIACDGIW 939
+D RVNG L +SRAIGD F K +S D LT +++++ACDG +
Sbjct: 309 VDCWRVNGTLAVSRAIGDVFQK---------PYVSGEADAASRELTGSEDYLLLACDGFF 359
Query: 940 NVMSSQEIIDFIQSKISQRDENGELSVMSSIVEELL 1047
+V+ QE+ +QS + ++ +G+ + EEL+
Sbjct: 360 DVVPHQEVAGLVQSHLVGQEGSGQ-----RVAEELV 390
>ref|XP_003131709.1| PREDICTED: protein phosphatase 1E [Sus scrofa].
Length = 750
Score = 81.3 bits (199), Expect = 9e-16
Identities = 50/148 (33%), Positives = 80/148 (54%), Gaps = 2/148 (1%)
Frame = +1
Query: 589 GTTAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGKVTMD 768
GTT VV IRG L VA GDS+ ++ G+A+++ HKP+ E E RI+ GG V
Sbjct: 324 GTTGVVTFIRGNMLHVAWVGDSQVMLVRKGQAVELMKPHKPDREDEKQRIEALGGCVVWF 383
Query: 769 G--RVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLTDDHEFMVIACDGIWN 942
G RVNG L++SRAIGD +K I D L +++++ACDG ++
Sbjct: 384 GAWRVNGSLSVSRAIGDAEHK---------PYICGDADSASTVLDGTEDYLILACDGFYD 434
Query: 943 VMSSQEIIDFIQSKISQRDENGELSVMS 1026
++ E + + + ++ NG+ S+++
Sbjct: 435 TVNPDEAVKVVSDHL--KENNGDSSMVA 460
>ref|XP_003362203.1| PREDICTED: [Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase
2, mitochondrial [Sus scrofa].
Length = 531
Score = 60.1 bits (144), Expect = 2e-09
Identities = 49/191 (25%), Positives = 86/191 (45%), Gaps = 41/191 (21%)
Frame = +1
Query: 586 SGTTAVVALIRGKQLIVANAGDSRCVV-----SEAGKALDMSYDHKPEDEVELARIKNAG 750
SG TA +A + G L VANAGD R ++ + L ++ DH + EL+R+K
Sbjct: 267 SGATACIAHVDGIHLHVANAGDCRAILGVQEDNGMWSCLPLTRDHNAWNPSELSRLKREH 326
Query: 751 GK-----VTMDGRVNGGLNLSRAIGDHFYKRNKNL--------------------PPE-- 849
+ V +D R+ G L RA GD K +K L PP
Sbjct: 327 PESEDRTVILDNRLLGVLMPCRAFGDVQLKWSKELQQSVLERGFDTEALNIYQFTPPNYY 386
Query: 850 -EQMISALPDIKVLTLTDDHEFMVIACDGIWNVMSSQEIIDFIQSKISQRDEN------- 1005
++A P++ L +F+V+A DG+W+V+ +++++ + +++ +
Sbjct: 387 TPPYLTAKPEVTYHRLRPQDKFLVLASDGLWDVLGNEDVVRLVVEHLAEGGRHKPDLAQR 446
Query: 1006 -GELSVMSSIV 1035
G L +M S++
Sbjct: 447 PGNLGLMQSLL 457
>ref|XP_001924873.3| PREDICTED: Pyruvate dehydrogenase [acetyl-transferring]-phosphatase
1-like [Sus scrofa].
Length = 588
Score = 59.7 bits (143), Expect = 3e-09
Identities = 49/164 (29%), Positives = 74/164 (45%), Gaps = 34/164 (20%)
Frame = +1
Query: 586 SGTTAVVALIRGKQLIVANAGDSRCVVS---EAGK--ALDMSYDHKPEDEVELARIK--- 741
SG TA VA + G L VAN GDSR ++ E G A+ +S DH ++E E+ R+K
Sbjct: 321 SGATACVAHVDGVDLHVANTGDSRAMLGVQEEDGSWSAVTLSNDHNAQNEREVERLKLEH 380
Query: 742 --NAGGKVTMDGRVNGGLNLSRAIGDHFYKRN---------------------KNLPPE- 849
N V R+ G L RA GD +K + K +PP
Sbjct: 381 PKNEAKSVVKQDRLLGLLMPFRAFGDVKFKWSIDLQKRVIESGPDQLNDNEYTKFIPPNY 440
Query: 850 --EQMISALPDIKVLTLTDDHEFMVIACDGIWNVMSSQEIIDFI 975
++A P++ L +F+V+A DG+W M Q+++ +
Sbjct: 441 YTPPYLTAEPEVTYHRLRPQDKFLVLATDGLWETMHRQDVVRIV 484
>ref|XP_003359225.1| PREDICTED: protein phosphatase 1F-like [Sus scrofa].
Length = 665
Score = 55.5 bits (132), Expect = 5e-08
Identities = 47/168 (27%), Positives = 77/168 (45%), Gaps = 14/168 (8%)
Frame = +1
Query: 586 SGTTAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPE---DEVELARIKNA--G 750
SGTT V ALI G L VA GDS+ ++ + G+ + + H+PE EV A + G
Sbjct: 249 SGTTGVCALIAGSTLHVAWLGDSQVLLVQQGQVVKLMEPHRPERQPPEVFWAFLATGHWG 308
Query: 751 GKV---------TMDGRVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLTDD 903
G V G + + + GD F K +S D LT
Sbjct: 309 GGVWRLGGPAYSKKRGLLGSCVTRGHSRGDVFQK---------PYVSGEADAASRELTGS 359
Query: 904 HEFMVIACDGIWNVMSSQEIIDFIQSKISQRDENGELSVMSSIVEELL 1047
+++++ACDG ++V+ QE+ +QS + ++ +G+ + EEL+
Sbjct: 360 EDYLLLACDGFFDVVPHQEVAGLVQSHLVGQEGSGQ-----RVAEELV 402
>ref|XP_001925065.3| PREDICTED: PH domain leucine-rich repeat-containing protein
phosphatase 1 [Sus scrofa].
Length = 1244
Score = 55.5 bits (132), Expect = 5e-08
Identities = 35/118 (29%), Positives = 57/118 (48%)
Frame = +1
Query: 628 LIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGKVTMDGRVNGGLNLSRAI 807
L AN G + V+ GK L +S + E EL RIK +T DG+VNG +R +
Sbjct: 819 LTSANVGKCQTVLCRNGKPLPLSRSYLMSSEEELKRIKRHKAIITEDGKVNGVTESTRIL 878
Query: 808 GDHFYKRNKNLPPEEQMISALPDIKVLTLTDDHEFMVIACDGIWNVMSSQEIIDFIQS 981
G F L P + P ++ + LT EF ++ G+W+ +S +E + +++
Sbjct: 879 GYTF------LHPS---VVPRPHVQSVPLTPQDEFFILGSKGLWDSLSIEEAVGAVRN 927
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.310 0.128 0.361
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 25,998,631
Number of extensions: 981869
Number of successful extensions: 3152
Number of sequences better than 1.0e-05: 11
Number of HSP's gapped: 3087
Number of HSP's successfully gapped: 11
Length of query: 362
Length of database: 11,343,932
Length adjustment: 100
Effective length of query: 262
Effective length of database: 8,854,232
Effective search space: 2319808784
Effective search space used: 2319808784
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.3 bits)
S2: 34 (17.7 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-003420
(1087 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr03 720 0.0
>Sscrofa_Chr03
|| Length = 144787322
Score = 720 bits (363), Expect = 0.0
Identities = 363/363 (100%)
Strand = Plus / Minus
Query: 19 gtggacaacgaggaggctgcactactgcatgaagaggctaccatgactattgaagagctg 78
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118707144 gtggacaacgaggaggctgcactactgcatgaagaggctaccatgactattgaagagctg 118707085
Query: 79 ctgacacgctatgggcagaactgtcacaagggtgctccccacagcaaatctggagctggg 138
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118707084 ctgacacgctatgggcagaactgtcacaagggtgctccccacagcaaatctggagctggg 118707025
Query: 139 acaggcgaggaagcagggtcccagggcctcaatggggaggcgggacctgaggacccatct 198
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118707024 acaggcgaggaagcagggtcccagggcctcaatggggaggcgggacctgaggacccatct 118706965
Query: 199 agggaaacttcttcagaggaaaatggccccacagccaaggctcacacaggcctttcctcc 258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118706964 agggaaacttcttcagaggaaaatggccccacagccaaggctcacacaggcctttcctcc 118706905
Query: 259 aactcggaacgtgggactgaggcaggccaagggggtgagcctggcactcccactggtgag 318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118706904 aactcggaacgtgggactgaggcaggccaagggggtgagcctggcactcccactggtgag 118706845
Query: 319 gctgggccttcctgctcttcagcctctgacaagctgcctcgagttgctaagtccaagttc 378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118706844 gctgggccttcctgctcttcagcctctgacaagctgcctcgagttgctaagtccaagttc 118706785
Query: 379 ttt 381
|||
Sbjct: 118706784 ttt 118706782
Score = 464 bits (234), Expect = e-128
Identities = 237/238 (99%)
Strand = Plus / Minus
Query: 572 agcctggctctgacagtggcacaacagcggtggtggctctgatacgagggaagcagttga 631
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118705687 agcctggctctgacagtggcacaacagcggtggtggctctgatacgagggaagcagttga 118705628
Query: 632 ttgtagccaatgcaggagactcccgctgtgtggtgtctgaggctggcaaagctttagaca 691
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118705627 ttgtagccaatgcaggagactcccgctgtgtggtgtctgaggctggcaaagctttagaca 118705568
Query: 692 tgtcctatgaccacaaaccagaggatgaagtggagctggcacgcatcaagaatgctggtg 751
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118705567 tgtcctatgaccacaaaccagaggatgaagtggagctggcacgcatcaagaatgctggtg 118705508
Query: 752 gcaaggtcaccatggacgggcgagtcaacggtggcctcaacctctccagagccattgg 809
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118705507 gcaaggtgaccatggacgggcgagtcaacggtggcctcaacctctccagagccattgg 118705450
Score = 262 bits (132), Expect = 4e-67
Identities = 132/132 (100%)
Strand = Plus / Minus
Query: 808 ggagaccacttctataagagaaacaagaacttaccacctgaggaacagatgatttcggcc 867
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118704946 ggagaccacttctataagagaaacaagaacttaccacctgaggaacagatgatttcggcc 118704887
Query: 868 ctccctgacatcaaggtgctgactctcactgatgatcacgaattcatggtcattgcctgt 927
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118704886 ctccctgacatcaaggtgctgactctcactgatgatcacgaattcatggtcattgcctgt 118704827
Query: 928 gatggcatctgg 939
||||||||||||
Sbjct: 118704826 gatggcatctgg 118704815
Score = 168 bits (85), Expect = 4e-39
Identities = 102/105 (97%), Gaps = 2/105 (1%)
Strand = Plus / Minus
Query: 938 ggaatgtgatgagcagccaggaaattatagactttattcagtccaagatcagccagcgtg 997
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 118704529 ggaatgtgatgagcagccaggaagttatagactttattcagtccaagatcagccagcgtg 118704470
Query: 998 atgaaaatggggagctttcggtta-tgtcatccatcgtggaagag 1041
||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 118704469 atgaaaatggggagc-ttcggttattgtcatccatcgtggaagag 118704426
Score = 65.9 bits (33), Expect = 4e-08
Identities = 46/49 (93%), Gaps = 1/49 (2%)
Strand = Plus / Minus
Query: 1040 agctgctggatcagtggctggcac-agacacttctggggacggtacagg 1087
|||||||||||||||| ||||||| |||||| |||||||||||||||||
Sbjct: 118704119 agctgctggatcagtgcctggcaccagacacctctggggacggtacagg 118704071
Score = 65.9 bits (33), Expect = 4e-08
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 541 atgatggtccctgggatggaaggcaaagaggag 573
|||||||||||||||||||||||||||||||||
Sbjct: 118706050 atgatggtccctgggatggaaggcaaagaggag 118706018
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 26,955,278
Number of extensions: 141
Number of successful extensions: 141
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 139
Number of HSP's successfully gapped: 6
Length of query: 1087
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1066
Effective length of database: 2,808,413,156
Effective search space: 2993768424296
Effective search space used: 2993768424296
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)