Animal-Genome cDNA 20110601C-003508

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-003508
         (1288 letters)

Database: RefSeq49_BP.fasta 
           33,088 sequences; 17,681,374 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_776706.2| coatomer subunit beta' [Bos taurus].                 793   0.0  
Alignment   gi|XP_002702344.1| PREDICTED: coatomer subunit beta-like [Bos t...   793   0.0  
Alignment   gi|NP_001099115.1| coatomer subunit alpha [Bos taurus].              212   7e-55
Alignment   gi|NP_777088.1| platelet-activating factor acetylhydrolase IB s...   117   2e-26
Alignment   gi|NP_001069717.1| F-box/WD repeat-containing protein 7 [Bos ta...   105   9e-23
Alignment   gi|NP_001092501.1| WD repeat-containing protein 51B [Bos taurus].    104   1e-22
Alignment   gi|XP_001251626.3| PREDICTED: WD repeat domain 51B-like, partia...   104   1e-22
Alignment   gi|XP_002685607.1| PREDICTED: sperm associated antigen 16 [Bos ...   101   2e-21
Alignment   gi|NP_001069398.1| WD repeat-containing protein 69 [Bos taurus].     100   3e-21
Alignment   gi|XP_002696296.1| PREDICTED: F-box and WD repeat domain contai...    99   6e-21

>ref|NP_776706.2| coatomer subunit beta' [Bos taurus].
          Length = 906

 Score =  793 bits (2049), Expect = 0.0
 Identities = 381/382 (99%), Positives = 381/382 (99%)
 Frame = +2

Query: 143  MPLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV 322
            MPLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV
Sbjct: 1    MPLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV 60

Query: 323  RAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDD 502
            RAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDD
Sbjct: 61   RAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDD 120

Query: 503  MLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT 682
            MLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT
Sbjct: 121  MLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT 180

Query: 683  LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPE 862
            LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPE
Sbjct: 181  LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPE 240

Query: 863  LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIVKLG 1042
            LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIVKLG
Sbjct: 241  LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIVKLG 300

Query: 1043 REEPAMSMDANGKIIWAKHSEVQQANLKAMGDAEIKDGERLPLAVKDMGSCEIYPQTIQH 1222
            REEPAMSMDANGKIIWAKHSEVQQANLKAMGDAEIKDGERLPLAVKDMGSCEIYPQTIQH
Sbjct: 301  REEPAMSMDANGKIIWAKHSEVQQANLKAMGDAEIKDGERLPLAVKDMGSCEIYPQTIQH 360

Query: 1223 NPNGPFVVVCGDGEYIIYTAMA 1288
            NPNG FVVVCGDGEYIIYTAMA
Sbjct: 361  NPNGRFVVVCGDGEYIIYTAMA 382


>ref|XP_002702344.1| PREDICTED: coatomer subunit beta-like [Bos taurus].
          Length = 737

 Score =  793 bits (2049), Expect = 0.0
 Identities = 381/382 (99%), Positives = 381/382 (99%)
 Frame = +2

Query: 143  MPLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV 322
            MPLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV
Sbjct: 1    MPLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV 60

Query: 323  RAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDD 502
            RAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDD
Sbjct: 61   RAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDD 120

Query: 503  MLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT 682
            MLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT
Sbjct: 121  MLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT 180

Query: 683  LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPE 862
            LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPE
Sbjct: 181  LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPE 240

Query: 863  LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIVKLG 1042
            LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIVKLG
Sbjct: 241  LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIVKLG 300

Query: 1043 REEPAMSMDANGKIIWAKHSEVQQANLKAMGDAEIKDGERLPLAVKDMGSCEIYPQTIQH 1222
            REEPAMSMDANGKIIWAKHSEVQQANLKAMGDAEIKDGERLPLAVKDMGSCEIYPQTIQH
Sbjct: 301  REEPAMSMDANGKIIWAKHSEVQQANLKAMGDAEIKDGERLPLAVKDMGSCEIYPQTIQH 360

Query: 1223 NPNGPFVVVCGDGEYIIYTAMA 1288
            NPNG FVVVCGDGEYIIYTAMA
Sbjct: 361  NPNGRFVVVCGDGEYIIYTAMA 382


>ref|NP_001099115.1| coatomer subunit alpha [Bos taurus].
          Length = 1224

 Score =  212 bits (539), Expect = 7e-55
 Identities = 124/367 (33%), Positives = 187/367 (50%), Gaps = 33/367 (8%)
 Frame = +2

Query: 170  KLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARK 349
            K   +S RVK +  HP  PW+L SL+NG + +W++   TL+  F+  D PVR   F  ++
Sbjct: 4    KFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQ 63

Query: 350  NWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWD 529
               V+G DD +I+V+NY     +     H DYIR    H   P+IL++SDD  I++W+W 
Sbjct: 64   PLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQ 123

Query: 530  KKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLG-----SSSP------- 673
             + +C  V  GH HYVM    +P + +   SASLD+T++VW +      + SP       
Sbjct: 124  SR-TCVCVLTGHNHYVMCAQFHPSE-DLVVSASLDQTVRVWDISGLRKKNLSPGAVESDV 181

Query: 674  ----------------NFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTC 805
                               LEGH++GVN   ++     P ++SGADDR VKIW       
Sbjct: 182  RGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHP--TMPLIVSGADDRQVKIWRMNESKA 239

Query: 806  --VQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVAS 979
              V T  GH  NVSCA FHP   +I++ SED ++R+W  S      T     +R W +A+
Sbjct: 240  WEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAA 299

Query: 980  LRGSNNVALGYDEGSIIVKLGREEPAMSMDANGKIIWAKHSEVQQANLKAMGDA---EIK 1150
                N  A G+D G I+ KL RE PA ++  N  + + K   ++Q +  +  D    +++
Sbjct: 300  HPNLNLFAAGHDGGMIVFKLERERPAYAVHGN-MLHYVKDRFLRQLDFNSSKDVAVMQLR 358

Query: 1151 DGERLPL 1171
             G + P+
Sbjct: 359  SGSKFPV 365


>ref|NP_777088.1| platelet-activating factor acetylhydrolase IB subunit alpha [Bos
           taurus].
          Length = 410

 Score =  117 bits (294), Expect = 2e-26
 Identities = 74/279 (26%), Positives = 126/279 (45%), Gaps = 18/279 (6%)
 Frame = +2

Query: 164 KRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVA 343
           K  L+     V  V  HP    M+++  + ++ VW++ET    +T +     V    F  
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVEDISFDH 160

Query: 344 RKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWD 523
               + + + DM I+++++   E +     H   +  +A+ P    I+++S D  IK+W+
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220

Query: 524 WDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKG 703
               + C + F GH  +V  +  N +D    AS S D+T++VW + +      L  HE  
Sbjct: 221 VQTGY-CVKTFTGHREWVRMVRPN-QDGTLIASCSNDQTVRVWVVATKECKAELREHEHV 278

Query: 704 VNCIDYY------------------SGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHA 829
           V CI +                   SG   P+L+SG+ D+ +K+WD     C+ TL GH 
Sbjct: 279 VECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHD 338

Query: 830 QNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLESTLN 946
             V    FH     I++ ++D T+R+W     R   TLN
Sbjct: 339 NWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLN 377



 Score =  115 bits (289), Expect = 6e-26
 Identities = 67/270 (24%), Positives = 126/270 (46%), Gaps = 19/270 (7%)
 Frame = +2

Query: 158 DIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKF 337
           D +R L   +D V+ +    +   + +   + ++ +W+ +    ++T    D  V +   
Sbjct: 141 DFERTLKGHTDSVEDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAI 200

Query: 338 VARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKL 517
           +   + +V+ + D  I+++   T   V  F  H +++R +  +     I + S+D  +++
Sbjct: 201 MPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRV 260

Query: 518 WDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQ-------------------FASASLDRT 640
           W    K  C      H H V  I   P+ +                       S S D+T
Sbjct: 261 WVVATK-ECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKT 319

Query: 641 IKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 820
           IK+W + +     TL GH+  V  + ++SGG   +++S ADD+ +++WDY+NK C++TL 
Sbjct: 320 IKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGK--FILSCADDKTLRVWDYKNKRCMKTLN 377

Query: 821 GHAQNVSCASFHPELPIIITGSEDGTVRIW 910
            H   V+   FH   P ++TGS D TV++W
Sbjct: 378 AHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407



 Score = 91.7 bits (226), Expect = 1e-18
 Identities = 58/223 (26%), Positives = 103/223 (46%)
 Frame = +2

Query: 419  HMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINP 598
            +    H   +  +  HP    ++++S+D  IK+WD++      +  +GHT  V  I  + 
Sbjct: 102  YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG-DFERTLKGHTDSVEDISFD- 159

Query: 599  KDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVK 778
                  AS S D TIK+W         T+ GH+  V+ +     GD  +++S + D+ +K
Sbjct: 160  HSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD--HIVSASRDKTIK 217

Query: 779  IWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLESTLNYGME 958
            +W+ Q   CV+T  GH + V     + +  +I + S D TVR+W  +T   ++ L     
Sbjct: 218  MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEH 277

Query: 959  RVWCVASLRGSNNVALGYDEGSIIVKLGREEPAMSMDANGKII 1087
             V C++    S+  ++    GS   K G+  P +   +  K I
Sbjct: 278  VVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTI 320



 Score = 70.9 bits (172), Expect = 2e-12
 Identities = 53/227 (23%), Positives = 96/227 (42%), Gaps = 20/227 (8%)
 Frame = +2

Query: 167 RKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVAR 346
           R +      V SV + P    ++++  + ++ +W  +T   VKTF      VR  +    
Sbjct: 186 RTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQD 245

Query: 347 KNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQ----------------- 475
              + + ++D  +RV+   T E       H   + CI+  P                   
Sbjct: 246 GTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSG 305

Query: 476 ---PFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIK 646
              PF+L+ S D  IK+WD      C     GH ++V  ++ +        S + D+T++
Sbjct: 306 KPGPFLLSGSRDKTIKMWDVSTGM-CLMTLVGHDNWVRGVLFH-SGGKFILSCADDKTLR 363

Query: 647 VWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWD 787
           VW   +     TL  HE  V  +D++     PY+++G+ D+ VK+W+
Sbjct: 364 VWDYKNKRCMKTLNAHEHFVTSLDFHKTA--PYVVTGSVDQTVKVWE 408


>ref|NP_001069717.1| F-box/WD repeat-containing protein 7 [Bos taurus].
          Length = 627

 Score =  105 bits (262), Expect = 9e-23
 Identities = 67/223 (30%), Positives = 113/223 (50%), Gaps = 3/223 (1%)
 Frame = +2

Query: 263 VWNHETQTLVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSD 442
           VWN ET   + T       VR      ++  VV+G+ D  +RV++  T + +H+   H  
Sbjct: 365 VWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWDIETGQCLHVLMGHVA 422

Query: 443 YIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFAS 622
            +RC+     +  +++ + D ++K+WD + + +C    +GHT+ V  +     D     S
Sbjct: 423 AVRCVQYDGRR--VVSGAYDFMVKVWDPETE-TCLHTLQGHTNRVYSLQF---DGIHVVS 476

Query: 623 ASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKT 802
            SLD +I+VW + + +   TL GH+   + ++         L+SG  D  VKIWD +   
Sbjct: 477 GSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN----ILVSGNADSTVKIWDIKTGQ 532

Query: 803 CVQTLEG---HAQNVSCASFHPELPIIITGSEDGTVRIWHSST 922
           C+QTL+G   H   V+C  F+     +IT S+DGTV++W   T
Sbjct: 533 CLQTLQGPNKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLKT 573



 Score = 87.4 bits (215), Expect = 2e-17
 Identities = 56/198 (28%), Positives = 98/198 (49%)
 Frame = +2

Query: 350 NWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWD 529
           N +V+G+DD  ++V++  T + +     H+  +    +      I++ S D  +K+W+ +
Sbjct: 312 NRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAE 369

Query: 530 KKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVN 709
               C     GHT  V  + ++ K   +  S S D T++VW + +      L GH   V 
Sbjct: 370 TG-ECIHTLYGHTSTVRCMHLHEK---RVVSGSRDATLRVWDIETGQCLHVLMGHVAAVR 425

Query: 710 CIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSE 889
           C+ Y    D   ++SGA D +VK+WD + +TC+ TL+GH   V    F  +   +++GS 
Sbjct: 426 CVQY----DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSL 479

Query: 890 DGTVRIWHSSTYRLESTL 943
           D ++R+W   T     TL
Sbjct: 480 DTSIRVWDVETGNCIHTL 497



 Score = 72.4 bits (176), Expect = 8e-13
 Identities = 49/156 (31%), Positives = 74/156 (47%)
 Frame = +2

Query: 548  QVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYS 727
            +V +GH  +V+  +      N+  S S D T+KVW   +     TL GH  GV    + S
Sbjct: 294  KVLKGHDDHVITCL--QFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV----WSS 347

Query: 728  GGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRI 907
                  +ISG+ DR +K+W+ +   C+ TL GH   V C   H +   +++GS D T+R+
Sbjct: 348  QMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRV 405

Query: 908  WHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYD 1015
            W   T +    L   +  V CV    G   V+  YD
Sbjct: 406  WDIETGQCLHVLMGHVAAVRCV-QYDGRRVVSGAYD 440



 Score = 68.2 bits (165), Expect = 2e-11
 Identities = 50/218 (22%), Positives = 103/218 (47%), Gaps = 3/218 (1%)
 Frame = +2

Query: 173 LTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARKN 352
           L   +  V+ + LH  E  +++   + ++ VW+ ET   +         VR  ++  R+ 
Sbjct: 377 LYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRR- 433

Query: 353 WVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDK 532
            VV+GA D  ++V++  T   +H  + H++ +  +        +++ S D  I++WD + 
Sbjct: 434 -VVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIH--VVSGSLDTSIRVWDVET 490

Query: 533 KWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEG---HEKG 703
             +C     GH      + +    +N   S + D T+K+W + +     TL+G   H+  
Sbjct: 491 G-NCIHTLTGHQSLTSGMELK---DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSA 546

Query: 704 VNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTL 817
           V C+ +    +K ++I+ +DD  VK+WD +    ++ L
Sbjct: 547 VTCLQF----NKNFVITSSDDGTVKLWDLKTGEFIRNL 580


>ref|NP_001092501.1| WD repeat-containing protein 51B [Bos taurus].
          Length = 478

 Score =  104 bits (260), Expect = 1e-22
 Identities = 62/250 (24%), Positives = 113/250 (45%)
 Frame = +2

Query: 170 KLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARK 349
           +     D + SV   P    + ++  + ++ +W  + +     F+    PVR+  F A  
Sbjct: 55  RYVGHKDVITSVQFSPLGNLLASASRDRTIRLWIPDKRGKSSEFKAHTAPVRSVDFSADG 114

Query: 350 NWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWD 529
            ++ + ++D  I+V+N      ++    H+ ++RC    P    I++ S+D  IK+WD  
Sbjct: 115 QFLASASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTT 174

Query: 530 KKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVN 709
            K  C   F     +   +  NP +    ASA  D T+K+W +  +      + H  GVN
Sbjct: 175 NK-QCVNNFSDFVGFANFVAFNP-NGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVN 232

Query: 710 CIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSE 889
           C+ ++  G+  YLI+ + D  +KI D      + TL+GH   V   SF     +  +G  
Sbjct: 233 CVSFHPSGN--YLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFTSGGA 290

Query: 890 DGTVRIWHSS 919
           D  V +W ++
Sbjct: 291 DAQVLLWRTN 300



 Score = 89.7 bits (221), Expect = 5e-18
 Identities = 67/291 (23%), Positives = 124/291 (42%)
 Frame = +2

Query: 161  IKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFV 340
            ++R        + SVD  P    +    ++  + +W+   Q     +      + + +F 
Sbjct: 10   LERYFKGHKAAITSVDFSPNGKQLATGSWDTFLMLWSLRPQARAFRYVGHKDVITSVQFS 69

Query: 341  ARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLW 520
               N + + + D  IR++  +   +   F+AH+  +R +       F+ ++S+D  IK+W
Sbjct: 70   PLGNLLASASRDRTIRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLASASEDKSIKVW 129

Query: 521  DWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEK 700
            +  ++     ++  HTH+V     +P D     S S D+TIK+W   +            
Sbjct: 130  NMYRQRFLYSLYR-HTHWVRCAKFSP-DGRLIVSCSEDKTIKIWDTTNKQCVNNFSDFVG 187

Query: 701  GVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIIT 880
              N + +   G    + S   D  VKIWD +    +Q  + H+  V+C SFHP    +IT
Sbjct: 188  FANFVAFNPNGT--CIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYLIT 245

Query: 881  GSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIV 1033
             S DGT++I      RL  TL      V+ V+  +G      G  +  +++
Sbjct: 246  ASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFTSGGADAQVLL 296



 Score = 89.4 bits (220), Expect = 6e-18
 Identities = 63/251 (25%), Positives = 107/251 (42%)
 Frame = +2

Query: 275  ETQTLVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRC 454
            E   L + F+     + +  F      + TG+ D  + +++     R   +  H D I  
Sbjct: 6    EDPVLERYFKGHKAAITSVDFSPNGKQLATGSWDTFLMLWSLRPQARAFRYVGHKDVITS 65

Query: 455  IAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLD 634
            +   P    + ++S D  I+LW  DK+   S+ F+ HT  V  +  +  D    ASAS D
Sbjct: 66   VQFSPLGNLLASASRDRTIRLWIPDKRGKSSE-FKAHTAPVRSVDFS-ADGQFLASASED 123

Query: 635  RTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQT 814
            ++IKVW +      ++L  H   V C  +    D   ++S ++D+ +KIWD  NK CV  
Sbjct: 124  KSIKVWNMYRQRFLYSLYRHTHWVRCAKF--SPDGRLIVSCSEDKTIKIWDTTNKQCVNN 181

Query: 815  LEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSN 994
                    +  +F+P    I +   D TV+IW     +L          V CV+     N
Sbjct: 182  FSDFVGFANFVAFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGN 241

Query: 995  NVALGYDEGSI 1027
             +     +G++
Sbjct: 242  YLITASSDGTL 252


>ref|XP_001251626.3| PREDICTED: WD repeat domain 51B-like, partial [Bos taurus].
          Length = 371

 Score =  104 bits (260), Expect = 1e-22
 Identities = 62/250 (24%), Positives = 113/250 (45%)
 Frame = +2

Query: 170 KLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARK 349
           +     D + SV   P    + ++  + ++ +W  + +     F+    PVR+  F A  
Sbjct: 55  RYVGHKDVITSVQFSPLGNLLASASRDRTIRLWIPDKRGKSSEFKAHTAPVRSVDFSADG 114

Query: 350 NWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWD 529
            ++ + ++D  I+V+N      ++    H+ ++RC    P    I++ S+D  IK+WD  
Sbjct: 115 QFLASASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTT 174

Query: 530 KKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVN 709
            K  C   F     +   +  NP +    ASA  D T+K+W +  +      + H  GVN
Sbjct: 175 NK-QCVNNFSDFVGFANFVAFNP-NGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVN 232

Query: 710 CIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSE 889
           C+ ++  G+  YLI+ + D  +KI D      + TL+GH   V   SF     +  +G  
Sbjct: 233 CVSFHPSGN--YLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFTSGGA 290

Query: 890 DGTVRIWHSS 919
           D  V +W ++
Sbjct: 291 DAQVLLWRTN 300



 Score = 89.7 bits (221), Expect = 5e-18
 Identities = 67/291 (23%), Positives = 124/291 (42%)
 Frame = +2

Query: 161  IKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFV 340
            ++R        + SVD  P    +    ++  + +W+   Q     +      + + +F 
Sbjct: 10   LERYFKGHKAAITSVDFSPNGKQLATGSWDTFLMLWSLRPQARAFRYVGHKDVITSVQFS 69

Query: 341  ARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLW 520
               N + + + D  IR++  +   +   F+AH+  +R +       F+ ++S+D  IK+W
Sbjct: 70   PLGNLLASASRDRTIRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLASASEDKSIKVW 129

Query: 521  DWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEK 700
            +  ++     ++  HTH+V     +P D     S S D+TIK+W   +            
Sbjct: 130  NMYRQRFLYSLYR-HTHWVRCAKFSP-DGRLIVSCSEDKTIKIWDTTNKQCVNNFSDFVG 187

Query: 701  GVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIIT 880
              N + +   G    + S   D  VKIWD +    +Q  + H+  V+C SFHP    +IT
Sbjct: 188  FANFVAFNPNGT--CIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYLIT 245

Query: 881  GSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIV 1033
             S DGT++I      RL  TL      V+ V+  +G      G  +  +++
Sbjct: 246  ASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFTSGGADAQVLL 296



 Score = 89.4 bits (220), Expect = 6e-18
 Identities = 63/251 (25%), Positives = 107/251 (42%)
 Frame = +2

Query: 275  ETQTLVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRC 454
            E   L + F+     + +  F      + TG+ D  + +++     R   +  H D I  
Sbjct: 6    EDPVLERYFKGHKAAITSVDFSPNGKQLATGSWDTFLMLWSLRPQARAFRYVGHKDVITS 65

Query: 455  IAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLD 634
            +   P    + ++S D  I+LW  DK+   S+ F+ HT  V  +  +  D    ASAS D
Sbjct: 66   VQFSPLGNLLASASRDRTIRLWIPDKRGKSSE-FKAHTAPVRSVDFS-ADGQFLASASED 123

Query: 635  RTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQT 814
            ++IKVW +      ++L  H   V C  +    D   ++S ++D+ +KIWD  NK CV  
Sbjct: 124  KSIKVWNMYRQRFLYSLYRHTHWVRCAKF--SPDGRLIVSCSEDKTIKIWDTTNKQCVNN 181

Query: 815  LEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSN 994
                    +  +F+P    I +   D TV+IW     +L          V CV+     N
Sbjct: 182  FSDFVGFANFVAFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGN 241

Query: 995  NVALGYDEGSI 1027
             +     +G++
Sbjct: 242  YLITASSDGTL 252


>ref|XP_002685607.1| PREDICTED: sperm associated antigen 16 [Bos taurus].
          Length = 628

 Score =  101 bits (251), Expect = 2e-21
 Identities = 66/210 (31%), Positives = 107/210 (50%), Gaps = 6/210 (2%)
 Frame = +2

Query: 299 FEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEA---HSDYIRCIAVHP 469
           F + +LPV        K+ +V+  +D   RV+    L + ++      H+D++     HP
Sbjct: 345 FRLHELPVSCIIMHPHKDLLVSCGED---RVWKMVGLPKGNVLLTGLGHTDWLSNCCFHP 401

Query: 470 TQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKV 649
           +   + TSS D  +KLWD  K  +C   FEGHTH V     +    +  AS+SLD T K+
Sbjct: 402 SGNKLATSSGDTTVKLWDVSKG-NCILTFEGHTHAVWSCTWH-SCGDFVASSSLDTTSKI 459

Query: 650 WQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPY---LISGADDRLVKIWDYQNKTCVQTLE 820
           W + S    +TL GH   VN I+++     PY   L++G+ D+ + IWD +   C Q+L 
Sbjct: 460 WDVNSERCRYTLYGHTDSVNSIEFF-----PYSNTLLTGSADKSLSIWDARTGKCEQSLY 514

Query: 821 GHAQNVSCASFHPELPIIITGSEDGTVRIW 910
           GH  +++ A+F P   +I +    G  ++W
Sbjct: 515 GHMHSINDATFTPRGHMIASCDACGVTKLW 544



 Score = 89.0 bits (219), Expect = 8e-18
 Identities = 53/178 (29%), Positives = 91/178 (51%)
 Frame = +2

Query: 419 HMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINP 598
           ++F  H   + CI +HP +  +++  +D + K+    K  +      GHT ++     +P
Sbjct: 343 NIFRLHELPVSCIIMHPHKDLLVSCGEDRVWKMVGLPKG-NVLLTGLGHTDWLSNCCFHP 401

Query: 599 KDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVK 778
              N+ A++S D T+K+W +   +   T EGH   V    ++S GD  ++ S + D   K
Sbjct: 402 S-GNKLATSSGDTTVKLWDVSKGNCILTFEGHTHAVWSCTWHSCGD--FVASSSLDTTSK 458

Query: 779 IWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLESTLNYG 952
           IWD  ++ C  TL GH  +V+   F P    ++TGS D ++ IW + T + E +L YG
Sbjct: 459 IWDVNSERCRYTLYGHTDSVNSIEFFPYSNTLLTGSADKSLSIWDARTGKCEQSL-YG 515



 Score = 64.3 bits (155), Expect = 2e-10
 Identities = 49/242 (20%), Positives = 99/242 (40%)
 Frame = +2

Query: 185  SDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARKNWVVT 364
            +D + +   HP+   +  S  + +V +W+      + TFE     V +  + +  ++V +
Sbjct: 391  TDWLSNCCFHPSGNKLATSSGDTTVKLWDVSKGNCILTFEGHTHAVWSCTWHSCGDFVAS 450

Query: 365  GADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSC 544
             + D   ++++ N+    +    H+D +  I   P    +LT S D  + +WD  +   C
Sbjct: 451  SSLDTTSKIWDVNSERCRYTLYGHTDSVNSIEFFPYSNTLLTGSADKSLSIWD-ARTGKC 509

Query: 545  SQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYY 724
             Q   GH H +      P+  +  AS       K+W      P  +++      N + + 
Sbjct: 510  EQSLYGHMHSINDATFTPR-GHMIASCDACGVTKLWDFRKLLPMVSIDVGPSPGNEVTFD 568

Query: 725  SGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVR 904
            S G    L   + + ++ + D ++   +  L GH        F  +   + +G  DGT+R
Sbjct: 569  SSGR--VLAQASGNGVIHLLDLKSGQ-IHKLMGHESEAHTVIFSRDGETLFSGGSDGTIR 625

Query: 905  IW 910
             W
Sbjct: 626  TW 627



 Score = 54.7 bits (130), Expect = 2e-07
 Identities = 41/166 (24%), Positives = 72/166 (43%)
 Frame = +2

Query: 536  WSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCI 715
            +  + +F  H   V  I+++P   +   S   DR  K+  L   +   T  GH   ++  
Sbjct: 339  YKLNNIFRLHELPVSCIIMHPH-KDLLVSCGEDRVWKMVGLPKGNVLLTGLGHTDWLSNC 397

Query: 716  DYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDG 895
             ++  G+K  L + + D  VK+WD     C+ T EGH   V   ++H     + + S D 
Sbjct: 398  CFHPSGNK--LATSSGDTTVKLWDVSKGNCILTFEGHTHAVWSCTWHSCGDFVASSSLDT 455

Query: 896  TVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIV 1033
            T +IW  ++ R   TL    + V  +     SN +  G  + S+ +
Sbjct: 456  TSKIWDVNSERCRYTLYGHTDSVNSIEFFPYSNTLLTGSADKSLSI 501


>ref|NP_001069398.1| WD repeat-containing protein 69 [Bos taurus].
          Length = 415

 Score =  100 bits (249), Expect = 3e-21
 Identities = 63/220 (28%), Positives = 107/220 (48%), Gaps = 1/220 (0%)
 Frame = +2

Query: 287 LVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVH 466
           L K      LP+         +  +TG+ D   ++++  + E +H  E H + +  IA +
Sbjct: 84  LFKVLRAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFN 143

Query: 467 -PTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTI 643
            P    I T S D   KLW  +    C   F GHT  ++ +  NP+ +   A+ S+D T 
Sbjct: 144 NPYGDKIATGSFDKTCKLWSVETG-KCYHTFRGHTAEIVCLSFNPQ-STLVATGSMDTTA 201

Query: 644 KVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEG 823
           K+W + S    FTL GH   +  + + + G++  +I+G+ D  V +W+      V TL G
Sbjct: 202 KLWDIQSGEEVFTLTGHSAEIISLSFNTSGNR--IITGSFDHTVTVWEADTGRKVYTLIG 259

Query: 824 HAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLESTL 943
           H   +S A F+ +  +I+TGS D T ++W +   +  +TL
Sbjct: 260 HCAEISSAVFNWDCSLILTGSMDKTCKLWDAVNGKCVATL 299



 Score = 95.9 bits (237), Expect = 7e-20
 Identities = 62/216 (28%), Positives = 101/216 (46%)
 Frame = +2

Query: 263 VWNHETQTLVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSD 442
           +W+ ++   V T       + +  F    N ++TG+ D  + V+  +T  +V+    H  
Sbjct: 203 LWDIQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTLIGHCA 262

Query: 443 YIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFAS 622
            I     +     ILT S D   KLWD      C     GH   ++    +       A+
Sbjct: 263 EISSAVFNWDCSLILTGSMDKTCKLWD-AVNGKCVATLTGHDDEILDSCFD-YTGKLIAT 320

Query: 623 ASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKT 802
           AS D T +++   +      LEGHE  ++ I +   G++  L++G+ D+  +IWD Q   
Sbjct: 321 ASADGTARIFSAATRECVTKLEGHEGEISKISFNPQGNR--LLTGSSDKTARIWDAQTGQ 378

Query: 803 CVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIW 910
           C+Q LEGH   +   +F+ +  IIITGS+D T RIW
Sbjct: 379 CLQVLEGHTDEIFSCAFNYKGDIIITGSKDNTCRIW 414



 Score = 92.8 bits (229), Expect = 6e-19
 Identities = 56/191 (29%), Positives = 94/191 (49%), Gaps = 2/191 (1%)
 Frame = +2

Query: 356 VVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKK 535
           + TG+ D   ++++  T +  H F  H+  I C++ +P    + T S D   KLWD    
Sbjct: 150 IATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQ-- 207

Query: 536 WSCSQVFE--GHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVN 709
            S  +VF   GH+  ++ +  N    N+  + S D T+ VW+  +    +TL GH   ++
Sbjct: 208 -SGEEVFTLTGHSAEIISLSFNTS-GNRIITGSFDHTVTVWEADTGRKVYTLIGHCAEIS 265

Query: 710 CIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSE 889
              +    D   +++G+ D+  K+WD  N  CV TL GH   +  + F     +I T S 
Sbjct: 266 SAVF--NWDCSLILTGSMDKTCKLWDAVNGKCVATLTGHDDEILDSCFDYTGKLIATASA 323

Query: 890 DGTVRIWHSST 922
           DGT RI+ ++T
Sbjct: 324 DGTARIFSAAT 334



 Score = 85.5 bits (210), Expect = 9e-17
 Identities = 62/245 (25%), Positives = 109/245 (44%), Gaps = 3/245 (1%)
 Frame = +2

Query: 263 VWNHETQTLVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSD 442
           +W+ ET     TF      +    F  +   V TG+ D   ++++  + E V     HS 
Sbjct: 161 LWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSGEEVFTLTGHSA 220

Query: 443 YIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFAS 622
            I  ++ + +   I+T S D  + +W+ D       +  GH   +   V N  D +   +
Sbjct: 221 EIISLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTLI-GHCAEISSAVFN-WDCSLILT 278

Query: 623 ASLDRTIKVWQLGSSSPNFTLEGHEKGV--NCIDYYSGGDKPYLISGADDRLVKIWDYQN 796
            S+D+T K+W   +     TL GH+  +  +C DY        + + + D   +I+    
Sbjct: 279 GSMDKTCKLWDAVNGKCVATLTGHDDEILDSCFDYTG----KLIATASADGTARIFSAAT 334

Query: 797 KTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVW-CV 973
           + CV  LEGH   +S  SF+P+   ++TGS D T RIW + T +    L    + ++ C 
Sbjct: 335 RECVTKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCA 394

Query: 974 ASLRG 988
            + +G
Sbjct: 395 FNYKG 399



 Score = 77.8 bits (190), Expect = 2e-14
 Identities = 41/127 (32%), Positives = 64/127 (50%), Gaps = 1/127 (0%)
 Frame = +2

Query: 533 KWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNC 712
           K+   +V   H   +  + +N K  + F + S DRT K+W   S     TLEGH   V  
Sbjct: 81  KFYLFKVLRAHILPLTNVALN-KSGSCFITGSYDRTCKLWDTASGEELHTLEGHRNVVYA 139

Query: 713 IDYYSG-GDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSE 889
           I + +  GDK  + +G+ D+  K+W  +   C  T  GH   + C SF+P+  ++ TGS 
Sbjct: 140 IAFNNPYGDK--IATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSM 197

Query: 890 DGTVRIW 910
           D T ++W
Sbjct: 198 DTTAKLW 204



 Score = 57.4 bits (137), Expect = 3e-08
 Identities = 48/205 (23%), Positives = 89/205 (43%), Gaps = 1/205 (0%)
 Frame = +2

Query: 173 LTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARKN 352
           LT  S  + S+  + +   ++   ++ +V VW  +T   V T       + +A F    +
Sbjct: 215 LTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTLIGHCAEISSAVFNWDCS 274

Query: 353 WVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDK 532
            ++TG+ D   ++++    + V     H D I       T   I T+S D   +++    
Sbjct: 275 LILTGSMDKTCKLWDAVNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAAT 334

Query: 533 KWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGV-N 709
           +  C    EGH   + +I  NP+  N+  + S D+T ++W   +      LEGH   + +
Sbjct: 335 R-ECVTKLEGHEGEISKISFNPQ-GNRLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFS 392

Query: 710 CIDYYSGGDKPYLISGADDRLVKIW 784
           C   Y G     +I+G+ D   +IW
Sbjct: 393 CAFNYKG---DIIITGSKDNTCRIW 414


>ref|XP_002696296.1| PREDICTED: F-box and WD repeat domain containing 11 [Bos taurus].
          Length = 542

 Score = 99.4 bits (246), Expect = 6e-21
 Identities = 67/251 (26%), Positives = 125/251 (49%), Gaps = 3/251 (1%)
 Frame = +2

Query: 167 RKLTARSDRVKSVD-LHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVA 343
           +++  RS+  K V  L   +  +++ L + S+ +W+  +   +K        V   ++  
Sbjct: 231 QRIQCRSENSKGVYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDE 290

Query: 344 RKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWD 523
           R   +VTG+ D  +RV++ NT E ++    H++ +  + +  +   ++T S D  I +WD
Sbjct: 291 RV--IVTGSSDSTVRVWDVNTGEVLNTLIHHNEAV--LHLRFSNGLMVTCSKDRSIAVWD 346

Query: 524 WDKKWSCS--QVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHE 697
                  +  +V  GH   V  +     D+    SAS DRTIKVW   +     TL GH+
Sbjct: 347 MASATDITLRRVLVGHRAAVNVVDF---DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHK 403

Query: 698 KGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIII 877
           +G+ C+ Y        ++SG+ D  +++WD +   C++ LEGH + V C  F  +   I+
Sbjct: 404 RGIACLQYRD----RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR--IV 457

Query: 878 TGSEDGTVRIW 910
           +G+ DG +++W
Sbjct: 458 SGAYDGKIKVW 468



 Score = 66.6 bits (161), Expect = 4e-11
 Identities = 48/194 (24%), Positives = 89/194 (45%), Gaps = 3/194 (1%)
 Frame = +2

Query: 401 NTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVM 580
           + L+R+     +S  + C+     +  I++   D  IK+WD      C +V  GHT  V+
Sbjct: 228 HNLQRIQCRSENSKGVYCLQYDDEK--IISGLRDNSIKIWD-KTSLECLKVLTGHTGSVL 284

Query: 581 QIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGA 760
            +     D     + S D T++VW + +     TL  H + V  + + +G     +++ +
Sbjct: 285 CLQY---DERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNG----LMVTCS 337

Query: 761 DDRLVKIWDYQNKTCV---QTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYRL 931
            DR + +WD  + T +   + L GH   V+   F  +   I++ S D T+++W +ST   
Sbjct: 338 KDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKY--IVSASGDRTIKVWSTSTCEF 395

Query: 932 ESTLNYGMERVWCV 973
             TLN     + C+
Sbjct: 396 VRTLNGHKRGIACL 409



 Score = 65.1 bits (157), Expect = 1e-10
 Identities = 38/103 (36%), Positives = 55/103 (53%)
 Frame = +2

Query: 692  HEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPI 871
            + KGV C+ Y    D   +ISG  D  +KIWD  +  C++ L GH  +V C  +     +
Sbjct: 239  NSKGVYCLQY----DDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDER--V 292

Query: 872  IITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNV 1000
            I+TGS D TVR+W  +T  + +TL +  E    V  LR SN +
Sbjct: 293  IVTGSSDSTVRVWDVNTGEVLNTLIHHNE---AVLHLRFSNGL 332


  Database: RefSeq49_BP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 17,681,374
  Number of sequences in database:  33,088
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 51,985,658
Number of extensions: 1406367
Number of successful extensions: 6208
Number of sequences better than 1.0e-05: 138
Number of HSP's gapped: 5080
Number of HSP's successfully gapped: 333
Length of query: 429
Length of database: 17,681,374
Length adjustment: 105
Effective length of query: 324
Effective length of database: 14,207,134
Effective search space: 4603111416
Effective search space used: 4603111416
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-003508
         (1288 letters)

Database: RefSeq49_CP.fasta 
           33,336 sequences; 18,874,504 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_534283.2| PREDICTED: similar to coatomer protein complex,...   793   0.0  
Alignment   gi|XP_536131.2| PREDICTED: similar to Coatomer alpha subunit (A...   207   1e-53
Alignment   gi|XP_537775.2| PREDICTED: similar to platelet-activating facto...   118   1e-26
Alignment   gi|XP_854482.1| PREDICTED: similar to platelet-activating facto...   118   1e-26
Alignment   gi|XP_868508.1| PREDICTED: similar to platelet-activating facto...   118   1e-26
Alignment   gi|XP_868519.1| PREDICTED: similar to platelet-activating facto...   116   5e-26
Alignment   gi|XP_532689.2| PREDICTED: similar to F-box protein FBW7 isofor...   105   9e-23
Alignment   gi|XP_867720.1| PREDICTED: similar to F-box protein FBW7 isofor...   105   9e-23
Alignment   gi|XP_867701.1| PREDICTED: similar to F-box protein FBW7 isofor...   105   9e-23
Alignment   gi|XP_853624.1| PREDICTED: similar to F-box protein FBW7 isofor...   105   9e-23

>ref|XP_534283.2| PREDICTED: similar to coatomer protein complex, subunit beta 2 (beta
            prime) [Canis familiaris].
          Length = 906

 Score =  793 bits (2049), Expect = 0.0
 Identities = 381/382 (99%), Positives = 381/382 (99%)
 Frame = +2

Query: 143  MPLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV 322
            MPLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV
Sbjct: 1    MPLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV 60

Query: 323  RAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDD 502
            RAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDD
Sbjct: 61   RAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDD 120

Query: 503  MLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT 682
            MLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT
Sbjct: 121  MLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT 180

Query: 683  LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPE 862
            LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPE
Sbjct: 181  LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPE 240

Query: 863  LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIVKLG 1042
            LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIVKLG
Sbjct: 241  LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIVKLG 300

Query: 1043 REEPAMSMDANGKIIWAKHSEVQQANLKAMGDAEIKDGERLPLAVKDMGSCEIYPQTIQH 1222
            REEPAMSMDANGKIIWAKHSEVQQANLKAMGDAEIKDGERLPLAVKDMGSCEIYPQTIQH
Sbjct: 301  REEPAMSMDANGKIIWAKHSEVQQANLKAMGDAEIKDGERLPLAVKDMGSCEIYPQTIQH 360

Query: 1223 NPNGPFVVVCGDGEYIIYTAMA 1288
            NPNG FVVVCGDGEYIIYTAMA
Sbjct: 361  NPNGRFVVVCGDGEYIIYTAMA 382


>ref|XP_536131.2| PREDICTED: similar to Coatomer alpha subunit (Alpha-coat protein)
            (Alpha-COP) (HEPCOP) (HEP-COP) [Canis familiaris].
          Length = 1241

 Score =  207 bits (528), Expect = 1e-53
 Identities = 123/363 (33%), Positives = 185/363 (50%), Gaps = 33/363 (9%)
 Frame = +2

Query: 182  RSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARKNWVV 361
            +S RVK +  HP  PW+L+SL+NG + +W     TL+  F+  D PVR   F  ++   V
Sbjct: 25   KSARVKGLSFHPKRPWILSSLHNGVIQLWTTGWCTLIDKFDEHDGPVRGIDFHKQQPLFV 84

Query: 362  TGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWS 541
            +G DD +I+V+NY     +     H DYIR    H   P+IL++SDD  I++W+W  + +
Sbjct: 85   SGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSR-T 143

Query: 542  CSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLG-----SSSP----------- 673
            C  V  GH HYVM    +P + +   SASLD+T++VW +      + SP           
Sbjct: 144  CVCVLTGHNHYVMCAQFHPSE-DLVVSASLDQTVRVWDISGLRKKNLSPGAVESDVRGIT 202

Query: 674  ------------NFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTC--VQ 811
                           LEGH++GVN   ++     P ++SGADDR VKIW         V 
Sbjct: 203  GVDLFGTTDAVVKHVLEGHDRGVNWAAFHP--TMPLIVSGADDRQVKIWRMNESKAWEVD 260

Query: 812  TLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGS 991
            T  GH  NVSCA FHP   +I++ SED ++R+W  S      T     +R W +A+    
Sbjct: 261  TCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAHPNL 320

Query: 992  NNVALGYDEGSIIVKLGREEPAMSMDANGKIIWAKHSEVQQANLKAMGDA---EIKDGER 1162
            N  A G+D G I+ KL RE PA ++  N  + + K   ++Q +  +  D    +++ G +
Sbjct: 321  NLFAAGHDGGMIVFKLERERPAYAVHGN-MLHYVKDRFLRQLDFNSSKDVAVMQLRSGSK 379

Query: 1163 LPL 1171
             P+
Sbjct: 380  FPV 382



 Score = 65.1 bits (157), Expect = 1e-10
 Identities = 46/192 (23%), Positives = 84/192 (43%), Gaps = 30/192 (15%)
 Frame = +2

Query: 173 LTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARKN 352
           L    D +++   H   PW+L++  + ++ VWN +++T V      +  V  A+F   ++
Sbjct: 106 LLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSED 165

Query: 353 WVVTGADDMQIRVFNYNTLER----------------------------VHMFEAHSDYI 448
            VV+ + D  +RV++ + L +                             H+ E H   +
Sbjct: 166 LVVSASLDQTVRVWDISGLRKKNLSPGAVESDVRGITGVDLFGTTDAVVKHVLEGHDRGV 225

Query: 449 RCIAVHPTQPFILTSSDDMLIKLW--DWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFAS 622
              A HPT P I++ +DD  +K+W  +  K W       GH + V   V +P+      S
Sbjct: 226 NWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEV-DTCRGHYNNVSCAVFHPR-QELILS 283

Query: 623 ASLDRTIKVWQL 658
            S D++I+VW +
Sbjct: 284 NSEDKSIRVWDM 295


>ref|XP_537775.2| PREDICTED: similar to platelet-activating factor acetylhydrolase
           beta subunit isoform 1 [Canis familiaris].
          Length = 372

 Score =  118 bits (295), Expect = 1e-26
 Identities = 74/279 (26%), Positives = 127/279 (45%), Gaps = 18/279 (6%)
 Frame = +2

Query: 164 KRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVA 343
           K  L+     V  V  HP    M+++  + ++ VW++ET    +T +     V+   F  
Sbjct: 63  KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 122

Query: 344 RKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWD 523
               + + + DM I+++++   E +     H   +  +A+ P    I+++S D  IK+W+
Sbjct: 123 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 182

Query: 524 WDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKG 703
               + C + F GH  +V  +  N +D    AS S D+T++VW + +      L  HE  
Sbjct: 183 VQTGY-CVKTFTGHREWVRMVRPN-QDGTLIASCSNDQTVRVWVVATKECKAELREHEHV 240

Query: 704 VNCIDYY------------------SGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHA 829
           V CI +                   SG   P+L+SG+ D+ +K+WD     C+ TL GH 
Sbjct: 241 VECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHD 300

Query: 830 QNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLESTLN 946
             V    FH     I++ ++D T+R+W     R   TLN
Sbjct: 301 NWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLN 339



 Score =  115 bits (289), Expect = 7e-26
 Identities = 67/270 (24%), Positives = 126/270 (46%), Gaps = 19/270 (7%)
 Frame = +2

Query: 158 DIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKF 337
           D +R L   +D V+ +    +   + +   + ++ +W+ +    ++T    D  V +   
Sbjct: 103 DFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAI 162

Query: 338 VARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKL 517
           +   + +V+ + D  I+++   T   V  F  H +++R +  +     I + S+D  +++
Sbjct: 163 MPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRV 222

Query: 518 WDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQ-------------------FASASLDRT 640
           W    K  C      H H V  I   P+ +                       S S D+T
Sbjct: 223 WVVATK-ECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKT 281

Query: 641 IKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 820
           IK+W + +     TL GH+  V  + ++SGG   +++S ADD+ +++WDY+NK C++TL 
Sbjct: 282 IKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGK--FILSCADDKTLRVWDYKNKRCMKTLN 339

Query: 821 GHAQNVSCASFHPELPIIITGSEDGTVRIW 910
            H   V+   FH   P ++TGS D TV++W
Sbjct: 340 AHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 369



 Score = 92.4 bits (228), Expect = 8e-19
 Identities = 58/223 (26%), Positives = 103/223 (46%)
 Frame = +2

Query: 419  HMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINP 598
            +    H   +  +  HP    ++++S+D  IK+WD++      +  +GHT  V  I  + 
Sbjct: 64   YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG-DFERTLKGHTDSVQDISFD- 121

Query: 599  KDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVK 778
                  AS S D TIK+W         T+ GH+  V+ +     GD  +++S + D+ +K
Sbjct: 122  HSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD--HIVSASRDKTIK 179

Query: 779  IWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLESTLNYGME 958
            +W+ Q   CV+T  GH + V     + +  +I + S D TVR+W  +T   ++ L     
Sbjct: 180  MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEH 239

Query: 959  RVWCVASLRGSNNVALGYDEGSIIVKLGREEPAMSMDANGKII 1087
             V C++    S+  ++    GS   K G+  P +   +  K I
Sbjct: 240  VVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTI 282



 Score = 70.9 bits (172), Expect = 3e-12
 Identities = 53/227 (23%), Positives = 96/227 (42%), Gaps = 20/227 (8%)
 Frame = +2

Query: 167 RKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVAR 346
           R +      V SV + P    ++++  + ++ +W  +T   VKTF      VR  +    
Sbjct: 148 RTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQD 207

Query: 347 KNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQ----------------- 475
              + + ++D  +RV+   T E       H   + CI+  P                   
Sbjct: 208 GTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSG 267

Query: 476 ---PFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIK 646
              PF+L+ S D  IK+WD      C     GH ++V  ++ +        S + D+T++
Sbjct: 268 KPGPFLLSGSRDKTIKMWDVSTGM-CLMTLVGHDNWVRGVLFH-SGGKFILSCADDKTLR 325

Query: 647 VWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWD 787
           VW   +     TL  HE  V  +D++     PY+++G+ D+ VK+W+
Sbjct: 326 VWDYKNKRCMKTLNAHEHFVTSLDFHKTA--PYVVTGSVDQTVKVWE 370


>ref|XP_854482.1| PREDICTED: similar to platelet-activating factor acetylhydrolase
           beta subunit isoform 2 [Canis familiaris].
          Length = 410

 Score =  118 bits (295), Expect = 1e-26
 Identities = 74/279 (26%), Positives = 127/279 (45%), Gaps = 18/279 (6%)
 Frame = +2

Query: 164 KRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVA 343
           K  L+     V  V  HP    M+++  + ++ VW++ET    +T +     V+   F  
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 160

Query: 344 RKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWD 523
               + + + DM I+++++   E +     H   +  +A+ P    I+++S D  IK+W+
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220

Query: 524 WDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKG 703
               + C + F GH  +V  +  N +D    AS S D+T++VW + +      L  HE  
Sbjct: 221 VQTGY-CVKTFTGHREWVRMVRPN-QDGTLIASCSNDQTVRVWVVATKECKAELREHEHV 278

Query: 704 VNCIDYY------------------SGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHA 829
           V CI +                   SG   P+L+SG+ D+ +K+WD     C+ TL GH 
Sbjct: 279 VECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHD 338

Query: 830 QNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLESTLN 946
             V    FH     I++ ++D T+R+W     R   TLN
Sbjct: 339 NWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLN 377



 Score =  115 bits (289), Expect = 7e-26
 Identities = 67/270 (24%), Positives = 126/270 (46%), Gaps = 19/270 (7%)
 Frame = +2

Query: 158 DIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKF 337
           D +R L   +D V+ +    +   + +   + ++ +W+ +    ++T    D  V +   
Sbjct: 141 DFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAI 200

Query: 338 VARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKL 517
           +   + +V+ + D  I+++   T   V  F  H +++R +  +     I + S+D  +++
Sbjct: 201 MPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRV 260

Query: 518 WDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQ-------------------FASASLDRT 640
           W    K  C      H H V  I   P+ +                       S S D+T
Sbjct: 261 WVVATK-ECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKT 319

Query: 641 IKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 820
           IK+W + +     TL GH+  V  + ++SGG   +++S ADD+ +++WDY+NK C++TL 
Sbjct: 320 IKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGK--FILSCADDKTLRVWDYKNKRCMKTLN 377

Query: 821 GHAQNVSCASFHPELPIIITGSEDGTVRIW 910
            H   V+   FH   P ++TGS D TV++W
Sbjct: 378 AHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407



 Score = 92.4 bits (228), Expect = 8e-19
 Identities = 58/223 (26%), Positives = 103/223 (46%)
 Frame = +2

Query: 419  HMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINP 598
            +    H   +  +  HP    ++++S+D  IK+WD++      +  +GHT  V  I  + 
Sbjct: 102  YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG-DFERTLKGHTDSVQDISFD- 159

Query: 599  KDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVK 778
                  AS S D TIK+W         T+ GH+  V+ +     GD  +++S + D+ +K
Sbjct: 160  HSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD--HIVSASRDKTIK 217

Query: 779  IWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLESTLNYGME 958
            +W+ Q   CV+T  GH + V     + +  +I + S D TVR+W  +T   ++ L     
Sbjct: 218  MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEH 277

Query: 959  RVWCVASLRGSNNVALGYDEGSIIVKLGREEPAMSMDANGKII 1087
             V C++    S+  ++    GS   K G+  P +   +  K I
Sbjct: 278  VVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTI 320



 Score = 70.9 bits (172), Expect = 3e-12
 Identities = 53/227 (23%), Positives = 96/227 (42%), Gaps = 20/227 (8%)
 Frame = +2

Query: 167 RKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVAR 346
           R +      V SV + P    ++++  + ++ +W  +T   VKTF      VR  +    
Sbjct: 186 RTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQD 245

Query: 347 KNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQ----------------- 475
              + + ++D  +RV+   T E       H   + CI+  P                   
Sbjct: 246 GTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSG 305

Query: 476 ---PFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIK 646
              PF+L+ S D  IK+WD      C     GH ++V  ++ +        S + D+T++
Sbjct: 306 KPGPFLLSGSRDKTIKMWDVSTGM-CLMTLVGHDNWVRGVLFH-SGGKFILSCADDKTLR 363

Query: 647 VWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWD 787
           VW   +     TL  HE  V  +D++     PY+++G+ D+ VK+W+
Sbjct: 364 VWDYKNKRCMKTLNAHEHFVTSLDFHKTA--PYVVTGSVDQTVKVWE 408


>ref|XP_868508.1| PREDICTED: similar to platelet-activating factor acetylhydrolase
           beta subunit isoform 3 [Canis familiaris].
          Length = 345

 Score =  118 bits (295), Expect = 1e-26
 Identities = 74/279 (26%), Positives = 127/279 (45%), Gaps = 18/279 (6%)
 Frame = +2

Query: 164 KRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVA 343
           K  L+     V  V  HP    M+++  + ++ VW++ET    +T +     V+   F  
Sbjct: 36  KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 95

Query: 344 RKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWD 523
               + + + DM I+++++   E +     H   +  +A+ P    I+++S D  IK+W+
Sbjct: 96  SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 155

Query: 524 WDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKG 703
               + C + F GH  +V  +  N +D    AS S D+T++VW + +      L  HE  
Sbjct: 156 VQTGY-CVKTFTGHREWVRMVRPN-QDGTLIASCSNDQTVRVWVVATKECKAELREHEHV 213

Query: 704 VNCIDYY------------------SGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHA 829
           V CI +                   SG   P+L+SG+ D+ +K+WD     C+ TL GH 
Sbjct: 214 VECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHD 273

Query: 830 QNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLESTLN 946
             V    FH     I++ ++D T+R+W     R   TLN
Sbjct: 274 NWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLN 312



 Score =  115 bits (289), Expect = 7e-26
 Identities = 67/270 (24%), Positives = 126/270 (46%), Gaps = 19/270 (7%)
 Frame = +2

Query: 158 DIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKF 337
           D +R L   +D V+ +    +   + +   + ++ +W+ +    ++T    D  V +   
Sbjct: 76  DFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAI 135

Query: 338 VARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKL 517
           +   + +V+ + D  I+++   T   V  F  H +++R +  +     I + S+D  +++
Sbjct: 136 MPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRV 195

Query: 518 WDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQ-------------------FASASLDRT 640
           W    K  C      H H V  I   P+ +                       S S D+T
Sbjct: 196 WVVATK-ECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKT 254

Query: 641 IKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 820
           IK+W + +     TL GH+  V  + ++SGG   +++S ADD+ +++WDY+NK C++TL 
Sbjct: 255 IKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGK--FILSCADDKTLRVWDYKNKRCMKTLN 312

Query: 821 GHAQNVSCASFHPELPIIITGSEDGTVRIW 910
            H   V+   FH   P ++TGS D TV++W
Sbjct: 313 AHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 342



 Score = 92.4 bits (228), Expect = 8e-19
 Identities = 58/223 (26%), Positives = 103/223 (46%)
 Frame = +2

Query: 419  HMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINP 598
            +    H   +  +  HP    ++++S+D  IK+WD++      +  +GHT  V  I  + 
Sbjct: 37   YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG-DFERTLKGHTDSVQDISFD- 94

Query: 599  KDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVK 778
                  AS S D TIK+W         T+ GH+  V+ +     GD  +++S + D+ +K
Sbjct: 95   HSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD--HIVSASRDKTIK 152

Query: 779  IWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLESTLNYGME 958
            +W+ Q   CV+T  GH + V     + +  +I + S D TVR+W  +T   ++ L     
Sbjct: 153  MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEH 212

Query: 959  RVWCVASLRGSNNVALGYDEGSIIVKLGREEPAMSMDANGKII 1087
             V C++    S+  ++    GS   K G+  P +   +  K I
Sbjct: 213  VVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTI 255



 Score = 70.9 bits (172), Expect = 3e-12
 Identities = 53/227 (23%), Positives = 96/227 (42%), Gaps = 20/227 (8%)
 Frame = +2

Query: 167 RKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVAR 346
           R +      V SV + P    ++++  + ++ +W  +T   VKTF      VR  +    
Sbjct: 121 RTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQD 180

Query: 347 KNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQ----------------- 475
              + + ++D  +RV+   T E       H   + CI+  P                   
Sbjct: 181 GTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSG 240

Query: 476 ---PFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIK 646
              PF+L+ S D  IK+WD      C     GH ++V  ++ +        S + D+T++
Sbjct: 241 KPGPFLLSGSRDKTIKMWDVSTGM-CLMTLVGHDNWVRGVLFH-SGGKFILSCADDKTLR 298

Query: 647 VWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWD 787
           VW   +     TL  HE  V  +D++     PY+++G+ D+ VK+W+
Sbjct: 299 VWDYKNKRCMKTLNAHEHFVTSLDFHKTA--PYVVTGSVDQTVKVWE 343


>ref|XP_868519.1| PREDICTED: similar to platelet-activating factor acetylhydrolase
           beta subunit isoform 5 [Canis familiaris].
          Length = 415

 Score =  116 bits (290), Expect = 5e-26
 Identities = 74/284 (26%), Positives = 127/284 (44%), Gaps = 23/284 (8%)
 Frame = +2

Query: 164 KRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVA 343
           K  L+     V  V  HP    M+++  + ++ VW++ET    +T +     V+   F  
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 160

Query: 344 RKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWD 523
               + + + DM I+++++   E +     H   +  +A+ P    I+++S D  IK+W+
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220

Query: 524 WDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKG 703
               + C + F GH  +V  +  N +D    AS S D+T++VW + +      L  HE  
Sbjct: 221 VQTGY-CVKTFTGHREWVRMVRPN-QDGTLIASCSNDQTVRVWVVATKECKAELREHEHV 278

Query: 704 VNCIDYY-----------------------SGGDKPYLISGADDRLVKIWDYQNKTCVQT 814
           V CI +                        SG   P+L+SG+ D+ +K+WD     C+ T
Sbjct: 279 VECISWAPESSYSSISEATGSEEENPRTKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMT 338

Query: 815 LEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLESTLN 946
           L GH   V    FH     I++ ++D T+R+W     R   TLN
Sbjct: 339 LVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLN 382



 Score =  114 bits (284), Expect = 3e-25
 Identities = 67/275 (24%), Positives = 126/275 (45%), Gaps = 24/275 (8%)
 Frame = +2

Query: 158 DIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKF 337
           D +R L   +D V+ +    +   + +   + ++ +W+ +    ++T    D  V +   
Sbjct: 141 DFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAI 200

Query: 338 VARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKL 517
           +   + +V+ + D  I+++   T   V  F  H +++R +  +     I + S+D  +++
Sbjct: 201 MPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRV 260

Query: 518 WDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQ------------------------FASA 625
           W    K  C      H H V  I   P+ +                            S 
Sbjct: 261 WVVATK-ECKAELREHEHVVECISWAPESSYSSISEATGSEEENPRTKKSGKPGPFLLSG 319

Query: 626 SLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTC 805
           S D+TIK+W + +     TL GH+  V  + ++SGG   +++S ADD+ +++WDY+NK C
Sbjct: 320 SRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGK--FILSCADDKTLRVWDYKNKRC 377

Query: 806 VQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIW 910
           ++TL  H   V+   FH   P ++TGS D TV++W
Sbjct: 378 MKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 412



 Score = 87.4 bits (215), Expect = 3e-17
 Identities = 53/202 (26%), Positives = 95/202 (47%)
 Frame = +2

Query: 419  HMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINP 598
            +    H   +  +  HP    ++++S+D  IK+WD++      +  +GHT  V  I  + 
Sbjct: 102  YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG-DFERTLKGHTDSVQDISFD- 159

Query: 599  KDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVK 778
                  AS S D TIK+W         T+ GH+  V+ +     GD  +++S + D+ +K
Sbjct: 160  HSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD--HIVSASRDKTIK 217

Query: 779  IWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLESTLNYGME 958
            +W+ Q   CV+T  GH + V     + +  +I + S D TVR+W  +T   ++ L     
Sbjct: 218  MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEH 277

Query: 959  RVWCVASLRGSNNVALGYDEGS 1024
             V C++    S+  ++    GS
Sbjct: 278  VVECISWAPESSYSSISEATGS 299



 Score = 68.9 bits (167), Expect = 1e-11
 Identities = 53/232 (22%), Positives = 96/232 (41%), Gaps = 25/232 (10%)
 Frame = +2

Query: 167 RKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVAR 346
           R +      V SV + P    ++++  + ++ +W  +T   VKTF      VR  +    
Sbjct: 186 RTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQD 245

Query: 347 KNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQ----------------- 475
              + + ++D  +RV+   T E       H   + CI+  P                   
Sbjct: 246 GTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSEEENPR 305

Query: 476 --------PFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASL 631
                   PF+L+ S D  IK+WD      C     GH ++V  ++ +        S + 
Sbjct: 306 TKKSGKPGPFLLSGSRDKTIKMWDVSTGM-CLMTLVGHDNWVRGVLFH-SGGKFILSCAD 363

Query: 632 DRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWD 787
           D+T++VW   +     TL  HE  V  +D++     PY+++G+ D+ VK+W+
Sbjct: 364 DKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTA--PYVVTGSVDQTVKVWE 413


>ref|XP_532689.2| PREDICTED: similar to F-box protein FBW7 isoform 3 isoform 1 [Canis
           familiaris].
          Length = 589

 Score =  105 bits (262), Expect = 9e-23
 Identities = 67/223 (30%), Positives = 113/223 (50%), Gaps = 3/223 (1%)
 Frame = +2

Query: 263 VWNHETQTLVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSD 442
           VWN ET   + T       VR      ++  VV+G+ D  +RV++  T + +H+   H  
Sbjct: 327 VWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWDIETGQCLHVLMGHVA 384

Query: 443 YIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFAS 622
            +RC+     +  +++ + D ++K+WD + + +C    +GHT+ V  +     D     S
Sbjct: 385 AVRCVQYDGRR--VVSGAYDFMVKVWDPETE-TCLHTLQGHTNRVYSLQF---DGIHVVS 438

Query: 623 ASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKT 802
            SLD +I+VW + + +   TL GH+   + ++         L+SG  D  VKIWD +   
Sbjct: 439 GSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN----ILVSGNADSTVKIWDIKTGQ 494

Query: 803 CVQTLEG---HAQNVSCASFHPELPIIITGSEDGTVRIWHSST 922
           C+QTL+G   H   V+C  F+     +IT S+DGTV++W   T
Sbjct: 495 CLQTLQGPNKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLKT 535



 Score = 87.4 bits (215), Expect = 3e-17
 Identities = 56/198 (28%), Positives = 98/198 (49%)
 Frame = +2

Query: 350 NWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWD 529
           N +V+G+DD  ++V++  T + +     H+  +    +      I++ S D  +K+W+ +
Sbjct: 274 NRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAE 331

Query: 530 KKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVN 709
               C     GHT  V  + ++ K   +  S S D T++VW + +      L GH   V 
Sbjct: 332 TG-ECIHTLYGHTSTVRCMHLHEK---RVVSGSRDATLRVWDIETGQCLHVLMGHVAAVR 387

Query: 710 CIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSE 889
           C+ Y    D   ++SGA D +VK+WD + +TC+ TL+GH   V    F  +   +++GS 
Sbjct: 388 CVQY----DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSL 441

Query: 890 DGTVRIWHSSTYRLESTL 943
           D ++R+W   T     TL
Sbjct: 442 DTSIRVWDVETGNCIHTL 459



 Score = 72.4 bits (176), Expect = 9e-13
 Identities = 49/156 (31%), Positives = 74/156 (47%)
 Frame = +2

Query: 548  QVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYS 727
            +V +GH  +V+  +      N+  S S D T+KVW   +     TL GH  GV    + S
Sbjct: 256  KVLKGHDDHVITCL--QFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV----WSS 309

Query: 728  GGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRI 907
                  +ISG+ DR +K+W+ +   C+ TL GH   V C   H +   +++GS D T+R+
Sbjct: 310  QMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRV 367

Query: 908  WHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYD 1015
            W   T +    L   +  V CV    G   V+  YD
Sbjct: 368  WDIETGQCLHVLMGHVAAVRCV-QYDGRRVVSGAYD 402



 Score = 68.2 bits (165), Expect = 2e-11
 Identities = 50/218 (22%), Positives = 103/218 (47%), Gaps = 3/218 (1%)
 Frame = +2

Query: 173 LTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARKN 352
           L   +  V+ + LH  E  +++   + ++ VW+ ET   +         VR  ++  R+ 
Sbjct: 339 LYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRR- 395

Query: 353 WVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDK 532
            VV+GA D  ++V++  T   +H  + H++ +  +        +++ S D  I++WD + 
Sbjct: 396 -VVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIH--VVSGSLDTSIRVWDVET 452

Query: 533 KWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEG---HEKG 703
             +C     GH      + +    +N   S + D T+K+W + +     TL+G   H+  
Sbjct: 453 G-NCIHTLTGHQSLTSGMELK---DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSA 508

Query: 704 VNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTL 817
           V C+ +    +K ++I+ +DD  VK+WD +    ++ L
Sbjct: 509 VTCLQF----NKNFVITSSDDGTVKLWDLKTGEFIRNL 542


>ref|XP_867720.1| PREDICTED: similar to F-box protein FBW7 isoform 2 isoform 5 [Canis
            familiaris].
          Length = 637

 Score =  105 bits (262), Expect = 9e-23
 Identities = 67/223 (30%), Positives = 113/223 (50%), Gaps = 3/223 (1%)
 Frame = +2

Query: 263  VWNHETQTLVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSD 442
            VWN ET   + T       VR      ++  VV+G+ D  +RV++  T + +H+   H  
Sbjct: 375  VWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWDIETGQCLHVLMGHVA 432

Query: 443  YIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFAS 622
             +RC+     +  +++ + D ++K+WD + + +C    +GHT+ V  +     D     S
Sbjct: 433  AVRCVQYDGRR--VVSGAYDFMVKVWDPETE-TCLHTLQGHTNRVYSLQF---DGIHVVS 486

Query: 623  ASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKT 802
             SLD +I+VW + + +   TL GH+   + ++         L+SG  D  VKIWD +   
Sbjct: 487  GSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN----ILVSGNADSTVKIWDIKTGQ 542

Query: 803  CVQTLEG---HAQNVSCASFHPELPIIITGSEDGTVRIWHSST 922
            C+QTL+G   H   V+C  F+     +IT S+DGTV++W   T
Sbjct: 543  CLQTLQGPNKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLKT 583



 Score = 87.4 bits (215), Expect = 3e-17
 Identities = 56/198 (28%), Positives = 98/198 (49%)
 Frame = +2

Query: 350 NWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWD 529
           N +V+G+DD  ++V++  T + +     H+  +    +      I++ S D  +K+W+ +
Sbjct: 322 NRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAE 379

Query: 530 KKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVN 709
               C     GHT  V  + ++ K   +  S S D T++VW + +      L GH   V 
Sbjct: 380 TG-ECIHTLYGHTSTVRCMHLHEK---RVVSGSRDATLRVWDIETGQCLHVLMGHVAAVR 435

Query: 710 CIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSE 889
           C+ Y    D   ++SGA D +VK+WD + +TC+ TL+GH   V    F  +   +++GS 
Sbjct: 436 CVQY----DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSL 489

Query: 890 DGTVRIWHSSTYRLESTL 943
           D ++R+W   T     TL
Sbjct: 490 DTSIRVWDVETGNCIHTL 507



 Score = 72.4 bits (176), Expect = 9e-13
 Identities = 49/156 (31%), Positives = 74/156 (47%)
 Frame = +2

Query: 548  QVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYS 727
            +V +GH  +V+  +      N+  S S D T+KVW   +     TL GH  GV    + S
Sbjct: 304  KVLKGHDDHVITCL--QFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV----WSS 357

Query: 728  GGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRI 907
                  +ISG+ DR +K+W+ +   C+ TL GH   V C   H +   +++GS D T+R+
Sbjct: 358  QMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRV 415

Query: 908  WHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYD 1015
            W   T +    L   +  V CV    G   V+  YD
Sbjct: 416  WDIETGQCLHVLMGHVAAVRCV-QYDGRRVVSGAYD 450



 Score = 68.2 bits (165), Expect = 2e-11
 Identities = 50/218 (22%), Positives = 103/218 (47%), Gaps = 3/218 (1%)
 Frame = +2

Query: 173 LTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARKN 352
           L   +  V+ + LH  E  +++   + ++ VW+ ET   +         VR  ++  R+ 
Sbjct: 387 LYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRR- 443

Query: 353 WVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDK 532
            VV+GA D  ++V++  T   +H  + H++ +  +        +++ S D  I++WD + 
Sbjct: 444 -VVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIH--VVSGSLDTSIRVWDVET 500

Query: 533 KWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEG---HEKG 703
             +C     GH      + +    +N   S + D T+K+W + +     TL+G   H+  
Sbjct: 501 G-NCIHTLTGHQSLTSGMELK---DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSA 556

Query: 704 VNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTL 817
           V C+ +    +K ++I+ +DD  VK+WD +    ++ L
Sbjct: 557 VTCLQF----NKNFVITSSDDGTVKLWDLKTGEFIRNL 590


>ref|XP_867701.1| PREDICTED: similar to F-box protein FBW7 isoform 2 isoform 3 [Canis
           familiaris].
          Length = 279

 Score =  105 bits (262), Expect = 9e-23
 Identities = 67/223 (30%), Positives = 113/223 (50%), Gaps = 3/223 (1%)
 Frame = +2

Query: 263 VWNHETQTLVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSD 442
           VWN ET   + T       VR      ++  VV+G+ D  +RV++  T + +H+   H  
Sbjct: 17  VWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWDIETGQCLHVLMGHVA 74

Query: 443 YIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFAS 622
            +RC+     +  +++ + D ++K+WD + + +C    +GHT+ V  +     D     S
Sbjct: 75  AVRCVQYDGRR--VVSGAYDFMVKVWDPETE-TCLHTLQGHTNRVYSLQF---DGIHVVS 128

Query: 623 ASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKT 802
            SLD +I+VW + + +   TL GH+   + ++         L+SG  D  VKIWD +   
Sbjct: 129 GSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN----ILVSGNADSTVKIWDIKTGQ 184

Query: 803 CVQTLEG---HAQNVSCASFHPELPIIITGSEDGTVRIWHSST 922
           C+QTL+G   H   V+C  F+     +IT S+DGTV++W   T
Sbjct: 185 CLQTLQGPNKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLKT 225



 Score = 80.9 bits (198), Expect = 2e-15
 Identities = 48/154 (31%), Positives = 78/154 (50%)
 Frame = +2

Query: 482 ILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLG 661
           I++ S D  +K+W+ +    C     GHT  V  + ++ K   +  S S D T++VW + 
Sbjct: 6   IISGSTDRTLKVWNAETG-ECIHTLYGHTSTVRCMHLHEK---RVVSGSRDATLRVWDIE 61

Query: 662 SSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVS 841
           +      L GH   V C+ Y    D   ++SGA D +VK+WD + +TC+ TL+GH   V 
Sbjct: 62  TGQCLHVLMGHVAAVRCVQY----DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVY 117

Query: 842 CASFHPELPIIITGSEDGTVRIWHSSTYRLESTL 943
              F  +   +++GS D ++R+W   T     TL
Sbjct: 118 SLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTL 149



 Score = 68.2 bits (165), Expect = 2e-11
 Identities = 50/218 (22%), Positives = 103/218 (47%), Gaps = 3/218 (1%)
 Frame = +2

Query: 173 LTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARKN 352
           L   +  V+ + LH  E  +++   + ++ VW+ ET   +         VR  ++  R+ 
Sbjct: 29  LYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRR- 85

Query: 353 WVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDK 532
            VV+GA D  ++V++  T   +H  + H++ +  +        +++ S D  I++WD + 
Sbjct: 86  -VVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIH--VVSGSLDTSIRVWDVET 142

Query: 533 KWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEG---HEKG 703
             +C     GH      + +    +N   S + D T+K+W + +     TL+G   H+  
Sbjct: 143 G-NCIHTLTGHQSLTSGMELK---DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSA 198

Query: 704 VNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTL 817
           V C+ +    +K ++I+ +DD  VK+WD +    ++ L
Sbjct: 199 VTCLQF----NKNFVITSSDDGTVKLWDLKTGEFIRNL 232



 Score = 64.3 bits (155), Expect = 2e-10
 Identities = 35/121 (28%), Positives = 57/121 (47%)
 Frame = +2

Query: 605 NNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIW 784
           +N   S S DRT+KVW   +     TL GH   V C+  +    +  ++SG+ D  +++W
Sbjct: 3   DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH----EKRVVSGSRDATLRVW 58

Query: 785 DYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLESTLNYGMERV 964
           D +   C+  L GH   V C  +      +++G+ D  V++W   T     TL     RV
Sbjct: 59  DIETGQCLHVLMGHVAAVRCVQYDGRR--VVSGAYDFMVKVWDPETETCLHTLQGHTNRV 116

Query: 965 W 967
           +
Sbjct: 117 Y 117



 Score = 56.2 bits (134), Expect = 7e-08
 Identities = 30/90 (33%), Positives = 46/90 (51%)
 Frame = +2

Query: 746  LISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTY 925
            +ISG+ DR +K+W+ +   C+ TL GH   V C   H +   +++GS D T+R+W   T 
Sbjct: 6    IISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWDIETG 63

Query: 926  RLESTLNYGMERVWCVASLRGSNNVALGYD 1015
            +    L   +  V CV    G   V+  YD
Sbjct: 64   QCLHVLMGHVAAVRCV-QYDGRRVVSGAYD 92


>ref|XP_853624.1| PREDICTED: similar to F-box protein FBW7 isoform 2 isoform 2 [Canis
           familiaris].
          Length = 627

 Score =  105 bits (262), Expect = 9e-23
 Identities = 67/223 (30%), Positives = 113/223 (50%), Gaps = 3/223 (1%)
 Frame = +2

Query: 263 VWNHETQTLVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSD 442
           VWN ET   + T       VR      ++  VV+G+ D  +RV++  T + +H+   H  
Sbjct: 365 VWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWDIETGQCLHVLMGHVA 422

Query: 443 YIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFAS 622
            +RC+     +  +++ + D ++K+WD + + +C    +GHT+ V  +     D     S
Sbjct: 423 AVRCVQYDGRR--VVSGAYDFMVKVWDPETE-TCLHTLQGHTNRVYSLQF---DGIHVVS 476

Query: 623 ASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKT 802
            SLD +I+VW + + +   TL GH+   + ++         L+SG  D  VKIWD +   
Sbjct: 477 GSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN----ILVSGNADSTVKIWDIKTGQ 532

Query: 803 CVQTLEG---HAQNVSCASFHPELPIIITGSEDGTVRIWHSST 922
           C+QTL+G   H   V+C  F+     +IT S+DGTV++W   T
Sbjct: 533 CLQTLQGPNKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLKT 573



 Score = 87.4 bits (215), Expect = 3e-17
 Identities = 56/198 (28%), Positives = 98/198 (49%)
 Frame = +2

Query: 350 NWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWD 529
           N +V+G+DD  ++V++  T + +     H+  +    +      I++ S D  +K+W+ +
Sbjct: 312 NRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAE 369

Query: 530 KKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVN 709
               C     GHT  V  + ++ K   +  S S D T++VW + +      L GH   V 
Sbjct: 370 TG-ECIHTLYGHTSTVRCMHLHEK---RVVSGSRDATLRVWDIETGQCLHVLMGHVAAVR 425

Query: 710 CIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSE 889
           C+ Y    D   ++SGA D +VK+WD + +TC+ TL+GH   V    F  +   +++GS 
Sbjct: 426 CVQY----DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSL 479

Query: 890 DGTVRIWHSSTYRLESTL 943
           D ++R+W   T     TL
Sbjct: 480 DTSIRVWDVETGNCIHTL 497



 Score = 72.4 bits (176), Expect = 9e-13
 Identities = 49/156 (31%), Positives = 74/156 (47%)
 Frame = +2

Query: 548  QVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYS 727
            +V +GH  +V+  +      N+  S S D T+KVW   +     TL GH  GV    + S
Sbjct: 294  KVLKGHDDHVITCL--QFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV----WSS 347

Query: 728  GGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRI 907
                  +ISG+ DR +K+W+ +   C+ TL GH   V C   H +   +++GS D T+R+
Sbjct: 348  QMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRV 405

Query: 908  WHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYD 1015
            W   T +    L   +  V CV    G   V+  YD
Sbjct: 406  WDIETGQCLHVLMGHVAAVRCV-QYDGRRVVSGAYD 440



 Score = 68.2 bits (165), Expect = 2e-11
 Identities = 50/218 (22%), Positives = 103/218 (47%), Gaps = 3/218 (1%)
 Frame = +2

Query: 173 LTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARKN 352
           L   +  V+ + LH  E  +++   + ++ VW+ ET   +         VR  ++  R+ 
Sbjct: 377 LYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRR- 433

Query: 353 WVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDK 532
            VV+GA D  ++V++  T   +H  + H++ +  +        +++ S D  I++WD + 
Sbjct: 434 -VVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIH--VVSGSLDTSIRVWDVET 490

Query: 533 KWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEG---HEKG 703
             +C     GH      + +    +N   S + D T+K+W + +     TL+G   H+  
Sbjct: 491 G-NCIHTLTGHQSLTSGMELK---DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSA 546

Query: 704 VNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTL 817
           V C+ +    +K ++I+ +DD  VK+WD +    ++ L
Sbjct: 547 VTCLQF----NKNFVITSSDDGTVKLWDLKTGEFIRNL 580


  Database: RefSeq49_CP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,874,504
  Number of sequences in database:  33,336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 54,205,626
Number of extensions: 1450967
Number of successful extensions: 6842
Number of sequences better than 1.0e-05: 181
Number of HSP's gapped: 5341
Number of HSP's successfully gapped: 432
Length of query: 429
Length of database: 18,874,504
Length adjustment: 106
Effective length of query: 323
Effective length of database: 15,340,888
Effective search space: 4955106824
Effective search space used: 4955106824
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-003508
         (1288 letters)

Database: RefSeq49_HP.fasta 
           32,964 sequences; 18,297,164 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_004757.1| coatomer subunit beta' [Homo sapiens].               793   0.0  
Alignment   gi|NP_001091868.1| coatomer subunit alpha isoform 1 [Homo sapie...   211   9e-55
Alignment   gi|NP_004362.2| coatomer subunit alpha isoform 2 [Homo sapiens].     211   9e-55
Alignment   gi|NP_000421.1| platelet-activating factor acetylhydrolase IB s...   118   1e-26
Alignment   gi|NP_001013433.1| F-box/WD repeat-containing protein 7 isoform...   105   9e-23
Alignment   gi|NP_361014.1| F-box/WD repeat-containing protein 7 isoform 1 ...   105   9e-23
Alignment   gi|NP_060785.2| F-box/WD repeat-containing protein 7 isoform 2 ...   105   9e-23
Alignment   gi|NP_001186706.1| POC1 centriolar protein homolog B isoform b ...   103   3e-22
Alignment   gi|NP_758440.1| POC1 centriolar protein homolog B isoform a [Ho...   103   3e-22
Alignment   gi|NP_849143.1| WD repeat-containing protein 69 [Homo sapiens].      101   1e-21

>ref|NP_004757.1| coatomer subunit beta' [Homo sapiens].
          Length = 906

 Score =  793 bits (2049), Expect = 0.0
 Identities = 381/382 (99%), Positives = 381/382 (99%)
 Frame = +2

Query: 143  MPLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV 322
            MPLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV
Sbjct: 1    MPLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV 60

Query: 323  RAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDD 502
            RAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDD
Sbjct: 61   RAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDD 120

Query: 503  MLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT 682
            MLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT
Sbjct: 121  MLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT 180

Query: 683  LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPE 862
            LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPE
Sbjct: 181  LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPE 240

Query: 863  LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIVKLG 1042
            LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIVKLG
Sbjct: 241  LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIVKLG 300

Query: 1043 REEPAMSMDANGKIIWAKHSEVQQANLKAMGDAEIKDGERLPLAVKDMGSCEIYPQTIQH 1222
            REEPAMSMDANGKIIWAKHSEVQQANLKAMGDAEIKDGERLPLAVKDMGSCEIYPQTIQH
Sbjct: 301  REEPAMSMDANGKIIWAKHSEVQQANLKAMGDAEIKDGERLPLAVKDMGSCEIYPQTIQH 360

Query: 1223 NPNGPFVVVCGDGEYIIYTAMA 1288
            NPNG FVVVCGDGEYIIYTAMA
Sbjct: 361  NPNGRFVVVCGDGEYIIYTAMA 382


>ref|NP_001091868.1| coatomer subunit alpha isoform 1 [Homo sapiens].
          Length = 1233

 Score =  211 bits (538), Expect = 9e-55
 Identities = 124/367 (33%), Positives = 187/367 (50%), Gaps = 33/367 (8%)
 Frame = +2

Query: 170  KLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARK 349
            K   +S RVK +  HP  PW+L SL+NG + +W++   TL+  F+  D PVR   F  ++
Sbjct: 4    KFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQ 63

Query: 350  NWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWD 529
               V+G DD +I+V+NY     +     H DYIR    H   P+IL++SDD  I++W+W 
Sbjct: 64   PLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQ 123

Query: 530  KKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLG-----SSSP------- 673
             + +C  V  GH HYVM    +P + +   SASLD+T++VW +      + SP       
Sbjct: 124  SR-TCVCVLTGHNHYVMCAQFHPTE-DLVVSASLDQTVRVWDISGLRKKNLSPGAVESDV 181

Query: 674  ----------------NFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTC 805
                               LEGH++GVN   ++     P ++SGADDR VKIW       
Sbjct: 182  RGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHP--TMPLIVSGADDRQVKIWRMNESKA 239

Query: 806  --VQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVAS 979
              V T  GH  NVSCA FHP   +I++ SED ++R+W  S      T     +R W +A+
Sbjct: 240  WEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAA 299

Query: 980  LRGSNNVALGYDEGSIIVKLGREEPAMSMDANGKIIWAKHSEVQQANLKAMGDA---EIK 1150
                N  A G+D G I+ KL RE PA ++  N  + + K   ++Q +  +  D    +++
Sbjct: 300  HPNLNLFAAGHDGGMIVFKLERERPAYAVHGN-MLHYVKDRFLRQLDFNSSKDVAVMQLR 358

Query: 1151 DGERLPL 1171
             G + P+
Sbjct: 359  SGSKFPV 365


>ref|NP_004362.2| coatomer subunit alpha isoform 2 [Homo sapiens].
          Length = 1224

 Score =  211 bits (538), Expect = 9e-55
 Identities = 124/367 (33%), Positives = 187/367 (50%), Gaps = 33/367 (8%)
 Frame = +2

Query: 170  KLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARK 349
            K   +S RVK +  HP  PW+L SL+NG + +W++   TL+  F+  D PVR   F  ++
Sbjct: 4    KFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQ 63

Query: 350  NWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWD 529
               V+G DD +I+V+NY     +     H DYIR    H   P+IL++SDD  I++W+W 
Sbjct: 64   PLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQ 123

Query: 530  KKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLG-----SSSP------- 673
             + +C  V  GH HYVM    +P + +   SASLD+T++VW +      + SP       
Sbjct: 124  SR-TCVCVLTGHNHYVMCAQFHPTE-DLVVSASLDQTVRVWDISGLRKKNLSPGAVESDV 181

Query: 674  ----------------NFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTC 805
                               LEGH++GVN   ++     P ++SGADDR VKIW       
Sbjct: 182  RGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHP--TMPLIVSGADDRQVKIWRMNESKA 239

Query: 806  --VQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVAS 979
              V T  GH  NVSCA FHP   +I++ SED ++R+W  S      T     +R W +A+
Sbjct: 240  WEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAA 299

Query: 980  LRGSNNVALGYDEGSIIVKLGREEPAMSMDANGKIIWAKHSEVQQANLKAMGDA---EIK 1150
                N  A G+D G I+ KL RE PA ++  N  + + K   ++Q +  +  D    +++
Sbjct: 300  HPNLNLFAAGHDGGMIVFKLERERPAYAVHGN-MLHYVKDRFLRQLDFNSSKDVAVMQLR 358

Query: 1151 DGERLPL 1171
             G + P+
Sbjct: 359  SGSKFPV 365


>ref|NP_000421.1| platelet-activating factor acetylhydrolase IB subunit alpha [Homo
           sapiens].
          Length = 410

 Score =  118 bits (295), Expect = 1e-26
 Identities = 74/279 (26%), Positives = 127/279 (45%), Gaps = 18/279 (6%)
 Frame = +2

Query: 164 KRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVA 343
           K  L+     V  V  HP    M+++  + ++ VW++ET    +T +     V+   F  
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 160

Query: 344 RKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWD 523
               + + + DM I+++++   E +     H   +  +A+ P    I+++S D  IK+W+
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220

Query: 524 WDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKG 703
               + C + F GH  +V  +  N +D    AS S D+T++VW + +      L  HE  
Sbjct: 221 VQTGY-CVKTFTGHREWVRMVRPN-QDGTLIASCSNDQTVRVWVVATKECKAELREHEHV 278

Query: 704 VNCIDYY------------------SGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHA 829
           V CI +                   SG   P+L+SG+ D+ +K+WD     C+ TL GH 
Sbjct: 279 VECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHD 338

Query: 830 QNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLESTLN 946
             V    FH     I++ ++D T+R+W     R   TLN
Sbjct: 339 NWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLN 377



 Score =  115 bits (289), Expect = 7e-26
 Identities = 67/270 (24%), Positives = 126/270 (46%), Gaps = 19/270 (7%)
 Frame = +2

Query: 158 DIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKF 337
           D +R L   +D V+ +    +   + +   + ++ +W+ +    ++T    D  V +   
Sbjct: 141 DFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAI 200

Query: 338 VARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKL 517
           +   + +V+ + D  I+++   T   V  F  H +++R +  +     I + S+D  +++
Sbjct: 201 MPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRV 260

Query: 518 WDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQ-------------------FASASLDRT 640
           W    K  C      H H V  I   P+ +                       S S D+T
Sbjct: 261 WVVATK-ECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKT 319

Query: 641 IKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 820
           IK+W + +     TL GH+  V  + ++SGG   +++S ADD+ +++WDY+NK C++TL 
Sbjct: 320 IKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGK--FILSCADDKTLRVWDYKNKRCMKTLN 377

Query: 821 GHAQNVSCASFHPELPIIITGSEDGTVRIW 910
            H   V+   FH   P ++TGS D TV++W
Sbjct: 378 AHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407



 Score = 92.4 bits (228), Expect = 8e-19
 Identities = 58/223 (26%), Positives = 103/223 (46%)
 Frame = +2

Query: 419  HMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINP 598
            +    H   +  +  HP    ++++S+D  IK+WD++      +  +GHT  V  I  + 
Sbjct: 102  YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG-DFERTLKGHTDSVQDISFD- 159

Query: 599  KDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVK 778
                  AS S D TIK+W         T+ GH+  V+ +     GD  +++S + D+ +K
Sbjct: 160  HSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD--HIVSASRDKTIK 217

Query: 779  IWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLESTLNYGME 958
            +W+ Q   CV+T  GH + V     + +  +I + S D TVR+W  +T   ++ L     
Sbjct: 218  MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEH 277

Query: 959  RVWCVASLRGSNNVALGYDEGSIIVKLGREEPAMSMDANGKII 1087
             V C++    S+  ++    GS   K G+  P +   +  K I
Sbjct: 278  VVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTI 320



 Score = 70.9 bits (172), Expect = 2e-12
 Identities = 53/227 (23%), Positives = 96/227 (42%), Gaps = 20/227 (8%)
 Frame = +2

Query: 167 RKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVAR 346
           R +      V SV + P    ++++  + ++ +W  +T   VKTF      VR  +    
Sbjct: 186 RTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQD 245

Query: 347 KNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQ----------------- 475
              + + ++D  +RV+   T E       H   + CI+  P                   
Sbjct: 246 GTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSG 305

Query: 476 ---PFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIK 646
              PF+L+ S D  IK+WD      C     GH ++V  ++ +        S + D+T++
Sbjct: 306 KPGPFLLSGSRDKTIKMWDVSTGM-CLMTLVGHDNWVRGVLFH-SGGKFILSCADDKTLR 363

Query: 647 VWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWD 787
           VW   +     TL  HE  V  +D++     PY+++G+ D+ VK+W+
Sbjct: 364 VWDYKNKRCMKTLNAHEHFVTSLDFHKTA--PYVVTGSVDQTVKVWE 408


>ref|NP_001013433.1| F-box/WD repeat-containing protein 7 isoform 3 [Homo sapiens].
          Length = 589

 Score =  105 bits (262), Expect = 9e-23
 Identities = 67/223 (30%), Positives = 113/223 (50%), Gaps = 3/223 (1%)
 Frame = +2

Query: 263 VWNHETQTLVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSD 442
           VWN ET   + T       VR      ++  VV+G+ D  +RV++  T + +H+   H  
Sbjct: 327 VWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWDIETGQCLHVLMGHVA 384

Query: 443 YIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFAS 622
            +RC+     +  +++ + D ++K+WD + + +C    +GHT+ V  +     D     S
Sbjct: 385 AVRCVQYDGRR--VVSGAYDFMVKVWDPETE-TCLHTLQGHTNRVYSLQF---DGIHVVS 438

Query: 623 ASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKT 802
            SLD +I+VW + + +   TL GH+   + ++         L+SG  D  VKIWD +   
Sbjct: 439 GSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN----ILVSGNADSTVKIWDIKTGQ 494

Query: 803 CVQTLEG---HAQNVSCASFHPELPIIITGSEDGTVRIWHSST 922
           C+QTL+G   H   V+C  F+     +IT S+DGTV++W   T
Sbjct: 495 CLQTLQGPNKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLKT 535



 Score = 87.4 bits (215), Expect = 3e-17
 Identities = 56/198 (28%), Positives = 98/198 (49%)
 Frame = +2

Query: 350 NWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWD 529
           N +V+G+DD  ++V++  T + +     H+  +    +      I++ S D  +K+W+ +
Sbjct: 274 NRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAE 331

Query: 530 KKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVN 709
               C     GHT  V  + ++ K   +  S S D T++VW + +      L GH   V 
Sbjct: 332 TG-ECIHTLYGHTSTVRCMHLHEK---RVVSGSRDATLRVWDIETGQCLHVLMGHVAAVR 387

Query: 710 CIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSE 889
           C+ Y    D   ++SGA D +VK+WD + +TC+ TL+GH   V    F  +   +++GS 
Sbjct: 388 CVQY----DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSL 441

Query: 890 DGTVRIWHSSTYRLESTL 943
           D ++R+W   T     TL
Sbjct: 442 DTSIRVWDVETGNCIHTL 459



 Score = 72.4 bits (176), Expect = 9e-13
 Identities = 49/156 (31%), Positives = 74/156 (47%)
 Frame = +2

Query: 548  QVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYS 727
            +V +GH  +V+  +      N+  S S D T+KVW   +     TL GH  GV    + S
Sbjct: 256  KVLKGHDDHVITCL--QFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV----WSS 309

Query: 728  GGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRI 907
                  +ISG+ DR +K+W+ +   C+ TL GH   V C   H +   +++GS D T+R+
Sbjct: 310  QMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRV 367

Query: 908  WHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYD 1015
            W   T +    L   +  V CV    G   V+  YD
Sbjct: 368  WDIETGQCLHVLMGHVAAVRCV-QYDGRRVVSGAYD 402



 Score = 68.2 bits (165), Expect = 2e-11
 Identities = 50/218 (22%), Positives = 103/218 (47%), Gaps = 3/218 (1%)
 Frame = +2

Query: 173 LTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARKN 352
           L   +  V+ + LH  E  +++   + ++ VW+ ET   +         VR  ++  R+ 
Sbjct: 339 LYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRR- 395

Query: 353 WVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDK 532
            VV+GA D  ++V++  T   +H  + H++ +  +        +++ S D  I++WD + 
Sbjct: 396 -VVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIH--VVSGSLDTSIRVWDVET 452

Query: 533 KWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEG---HEKG 703
             +C     GH      + +    +N   S + D T+K+W + +     TL+G   H+  
Sbjct: 453 G-NCIHTLTGHQSLTSGMELK---DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSA 508

Query: 704 VNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTL 817
           V C+ +    +K ++I+ +DD  VK+WD +    ++ L
Sbjct: 509 VTCLQF----NKNFVITSSDDGTVKLWDLKTGEFIRNL 542


>ref|NP_361014.1| F-box/WD repeat-containing protein 7 isoform 1 [Homo sapiens].
          Length = 707

 Score =  105 bits (262), Expect = 9e-23
 Identities = 67/223 (30%), Positives = 113/223 (50%), Gaps = 3/223 (1%)
 Frame = +2

Query: 263  VWNHETQTLVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSD 442
            VWN ET   + T       VR      ++  VV+G+ D  +RV++  T + +H+   H  
Sbjct: 445  VWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWDIETGQCLHVLMGHVA 502

Query: 443  YIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFAS 622
             +RC+     +  +++ + D ++K+WD + + +C    +GHT+ V  +     D     S
Sbjct: 503  AVRCVQYDGRR--VVSGAYDFMVKVWDPETE-TCLHTLQGHTNRVYSLQF---DGIHVVS 556

Query: 623  ASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKT 802
             SLD +I+VW + + +   TL GH+   + ++         L+SG  D  VKIWD +   
Sbjct: 557  GSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN----ILVSGNADSTVKIWDIKTGQ 612

Query: 803  CVQTLEG---HAQNVSCASFHPELPIIITGSEDGTVRIWHSST 922
            C+QTL+G   H   V+C  F+     +IT S+DGTV++W   T
Sbjct: 613  CLQTLQGPNKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLKT 653



 Score = 87.4 bits (215), Expect = 3e-17
 Identities = 56/198 (28%), Positives = 98/198 (49%)
 Frame = +2

Query: 350 NWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWD 529
           N +V+G+DD  ++V++  T + +     H+  +    +      I++ S D  +K+W+ +
Sbjct: 392 NRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAE 449

Query: 530 KKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVN 709
               C     GHT  V  + ++ K   +  S S D T++VW + +      L GH   V 
Sbjct: 450 TG-ECIHTLYGHTSTVRCMHLHEK---RVVSGSRDATLRVWDIETGQCLHVLMGHVAAVR 505

Query: 710 CIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSE 889
           C+ Y    D   ++SGA D +VK+WD + +TC+ TL+GH   V    F  +   +++GS 
Sbjct: 506 CVQY----DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSL 559

Query: 890 DGTVRIWHSSTYRLESTL 943
           D ++R+W   T     TL
Sbjct: 560 DTSIRVWDVETGNCIHTL 577



 Score = 72.4 bits (176), Expect = 9e-13
 Identities = 49/156 (31%), Positives = 74/156 (47%)
 Frame = +2

Query: 548  QVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYS 727
            +V +GH  +V+  +      N+  S S D T+KVW   +     TL GH  GV    + S
Sbjct: 374  KVLKGHDDHVITCL--QFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV----WSS 427

Query: 728  GGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRI 907
                  +ISG+ DR +K+W+ +   C+ TL GH   V C   H +   +++GS D T+R+
Sbjct: 428  QMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRV 485

Query: 908  WHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYD 1015
            W   T +    L   +  V CV    G   V+  YD
Sbjct: 486  WDIETGQCLHVLMGHVAAVRCV-QYDGRRVVSGAYD 520



 Score = 68.2 bits (165), Expect = 2e-11
 Identities = 50/218 (22%), Positives = 103/218 (47%), Gaps = 3/218 (1%)
 Frame = +2

Query: 173  LTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARKN 352
            L   +  V+ + LH  E  +++   + ++ VW+ ET   +         VR  ++  R+ 
Sbjct: 457  LYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRR- 513

Query: 353  WVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDK 532
             VV+GA D  ++V++  T   +H  + H++ +  +        +++ S D  I++WD + 
Sbjct: 514  -VVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIH--VVSGSLDTSIRVWDVET 570

Query: 533  KWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEG---HEKG 703
              +C     GH      + +    +N   S + D T+K+W + +     TL+G   H+  
Sbjct: 571  G-NCIHTLTGHQSLTSGMELK---DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSA 626

Query: 704  VNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTL 817
            V C+ +    +K ++I+ +DD  VK+WD +    ++ L
Sbjct: 627  VTCLQF----NKNFVITSSDDGTVKLWDLKTGEFIRNL 660


>ref|NP_060785.2| F-box/WD repeat-containing protein 7 isoform 2 [Homo sapiens].
          Length = 627

 Score =  105 bits (262), Expect = 9e-23
 Identities = 67/223 (30%), Positives = 113/223 (50%), Gaps = 3/223 (1%)
 Frame = +2

Query: 263 VWNHETQTLVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSD 442
           VWN ET   + T       VR      ++  VV+G+ D  +RV++  T + +H+   H  
Sbjct: 365 VWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWDIETGQCLHVLMGHVA 422

Query: 443 YIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFAS 622
            +RC+     +  +++ + D ++K+WD + + +C    +GHT+ V  +     D     S
Sbjct: 423 AVRCVQYDGRR--VVSGAYDFMVKVWDPETE-TCLHTLQGHTNRVYSLQF---DGIHVVS 476

Query: 623 ASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKT 802
            SLD +I+VW + + +   TL GH+   + ++         L+SG  D  VKIWD +   
Sbjct: 477 GSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN----ILVSGNADSTVKIWDIKTGQ 532

Query: 803 CVQTLEG---HAQNVSCASFHPELPIIITGSEDGTVRIWHSST 922
           C+QTL+G   H   V+C  F+     +IT S+DGTV++W   T
Sbjct: 533 CLQTLQGPNKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLKT 573



 Score = 87.4 bits (215), Expect = 3e-17
 Identities = 56/198 (28%), Positives = 98/198 (49%)
 Frame = +2

Query: 350 NWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWD 529
           N +V+G+DD  ++V++  T + +     H+  +    +      I++ S D  +K+W+ +
Sbjct: 312 NRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAE 369

Query: 530 KKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVN 709
               C     GHT  V  + ++ K   +  S S D T++VW + +      L GH   V 
Sbjct: 370 TG-ECIHTLYGHTSTVRCMHLHEK---RVVSGSRDATLRVWDIETGQCLHVLMGHVAAVR 425

Query: 710 CIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSE 889
           C+ Y    D   ++SGA D +VK+WD + +TC+ TL+GH   V    F  +   +++GS 
Sbjct: 426 CVQY----DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSL 479

Query: 890 DGTVRIWHSSTYRLESTL 943
           D ++R+W   T     TL
Sbjct: 480 DTSIRVWDVETGNCIHTL 497



 Score = 72.4 bits (176), Expect = 9e-13
 Identities = 49/156 (31%), Positives = 74/156 (47%)
 Frame = +2

Query: 548  QVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYS 727
            +V +GH  +V+  +      N+  S S D T+KVW   +     TL GH  GV    + S
Sbjct: 294  KVLKGHDDHVITCL--QFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV----WSS 347

Query: 728  GGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRI 907
                  +ISG+ DR +K+W+ +   C+ TL GH   V C   H +   +++GS D T+R+
Sbjct: 348  QMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRV 405

Query: 908  WHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYD 1015
            W   T +    L   +  V CV    G   V+  YD
Sbjct: 406  WDIETGQCLHVLMGHVAAVRCV-QYDGRRVVSGAYD 440



 Score = 68.2 bits (165), Expect = 2e-11
 Identities = 50/218 (22%), Positives = 103/218 (47%), Gaps = 3/218 (1%)
 Frame = +2

Query: 173 LTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARKN 352
           L   +  V+ + LH  E  +++   + ++ VW+ ET   +         VR  ++  R+ 
Sbjct: 377 LYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRR- 433

Query: 353 WVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDK 532
            VV+GA D  ++V++  T   +H  + H++ +  +        +++ S D  I++WD + 
Sbjct: 434 -VVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIH--VVSGSLDTSIRVWDVET 490

Query: 533 KWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEG---HEKG 703
             +C     GH      + +    +N   S + D T+K+W + +     TL+G   H+  
Sbjct: 491 G-NCIHTLTGHQSLTSGMELK---DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSA 546

Query: 704 VNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTL 817
           V C+ +    +K ++I+ +DD  VK+WD +    ++ L
Sbjct: 547 VTCLQF----NKNFVITSSDDGTVKLWDLKTGEFIRNL 580


>ref|NP_001186706.1| POC1 centriolar protein homolog B isoform b [Homo sapiens].
          Length = 436

 Score =  103 bits (257), Expect = 3e-22
 Identities = 66/250 (26%), Positives = 113/250 (45%)
 Frame = +2

Query: 170 KLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARK 349
           +     D V SV   P    + ++  + +V +W  + +     F+    PVR+  F A  
Sbjct: 13  RYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADG 72

Query: 350 NWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWD 529
            ++ T ++D  I+V++      ++    H+ ++RC    P    I++ S+D  IK+WD  
Sbjct: 73  QFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTT 132

Query: 530 KKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVN 709
            K  C   F     +   +  NP      ASA  D+T+KVW +  +      + H  GVN
Sbjct: 133 NK-QCVNNFSDSVGFANFVDFNP-SGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVN 190

Query: 710 CIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSE 889
           CI ++  G+  YLI+ + D  +KI D      + TL+GH   V   SF     +  +G  
Sbjct: 191 CISFHPSGN--YLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGA 248

Query: 890 DGTVRIWHSS 919
           D  V +W ++
Sbjct: 249 DTQVLLWRTN 258



 Score = 90.5 bits (223), Expect = 3e-18
 Identities = 62/238 (26%), Positives = 109/238 (45%)
 Frame = +2

Query: 320  VRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSD 499
            V + +F    N + + + D  +R++  +   +   F+AH+  +R +       F+ T+S+
Sbjct: 21   VTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASE 80

Query: 500  DMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNF 679
            D  IK+W   ++     ++  HTH+V     +P D     S S D+TIK+W   +     
Sbjct: 81   DKSIKVWSMYRQRFLYSLYR-HTHWVRCAKFSP-DGRLIVSCSEDKTIKIWDTTNKQCVN 138

Query: 680  TLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHP 859
                     N +D+   G    + S   D+ VK+WD +    +Q  + H+  V+C SFHP
Sbjct: 139  NFSDSVGFANFVDFNPSGT--CIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHP 196

Query: 860  ELPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIV 1033
                +IT S DGT++I      RL  TL      V+ V+  +G    A G  +  +++
Sbjct: 197  SGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLL 254



 Score = 83.6 bits (205), Expect = 4e-16
 Identities = 52/213 (24%), Positives = 94/213 (44%)
 Frame = +2

Query: 389  VFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHT 568
            ++N+    R + +  H D +  +   P    + ++S D  ++LW  DK+   S+ F+ HT
Sbjct: 2    LWNFKPHARAYRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSE-FKAHT 60

Query: 569  HYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYL 748
              V  +  +  D    A+AS D++IKVW +      ++L  H   V C  +    D   +
Sbjct: 61   APVRSVDFS-ADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKF--SPDGRLI 117

Query: 749  ISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYR 928
            +S ++D+ +KIWD  NK CV          +   F+P    I +   D TV++W     +
Sbjct: 118  VSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNK 177

Query: 929  LESTLNYGMERVWCVASLRGSNNVALGYDEGSI 1027
            L          V C++     N +     +G++
Sbjct: 178  LLQHYQVHSGGVNCISFHPSGNYLITASSDGTL 210


>ref|NP_758440.1| POC1 centriolar protein homolog B isoform a [Homo sapiens].
          Length = 478

 Score =  103 bits (257), Expect = 3e-22
 Identities = 66/250 (26%), Positives = 113/250 (45%)
 Frame = +2

Query: 170 KLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARK 349
           +     D V SV   P    + ++  + +V +W  + +     F+    PVR+  F A  
Sbjct: 55  RYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADG 114

Query: 350 NWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWD 529
            ++ T ++D  I+V++      ++    H+ ++RC    P    I++ S+D  IK+WD  
Sbjct: 115 QFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTT 174

Query: 530 KKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVN 709
            K  C   F     +   +  NP      ASA  D+T+KVW +  +      + H  GVN
Sbjct: 175 NK-QCVNNFSDSVGFANFVDFNP-SGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVN 232

Query: 710 CIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSE 889
           CI ++  G+  YLI+ + D  +KI D      + TL+GH   V   SF     +  +G  
Sbjct: 233 CISFHPSGN--YLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGA 290

Query: 890 DGTVRIWHSS 919
           D  V +W ++
Sbjct: 291 DTQVLLWRTN 300



 Score = 97.8 bits (242), Expect = 2e-20
 Identities = 69/291 (23%), Positives = 128/291 (43%)
 Frame = +2

Query: 161  IKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFV 340
            ++R        + S+DL P    +  + ++  + +WN +       +      V + +F 
Sbjct: 10   LERYFKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFS 69

Query: 341  ARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLW 520
               N + + + D  +R++  +   +   F+AH+  +R +       F+ T+S+D  IK+W
Sbjct: 70   PHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVW 129

Query: 521  DWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEK 700
               ++     ++  HTH+V     +P D     S S D+TIK+W   +            
Sbjct: 130  SMYRQRFLYSLYR-HTHWVRCAKFSP-DGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVG 187

Query: 701  GVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIIT 880
              N +D+   G    + S   D+ VK+WD +    +Q  + H+  V+C SFHP    +IT
Sbjct: 188  FANFVDFNPSGT--CIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLIT 245

Query: 881  GSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIV 1033
             S DGT++I      RL  TL      V+ V+  +G    A G  +  +++
Sbjct: 246  ASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLL 296


>ref|NP_849143.1| WD repeat-containing protein 69 [Homo sapiens].
          Length = 415

 Score =  101 bits (252), Expect = 1e-21
 Identities = 65/226 (28%), Positives = 112/226 (49%), Gaps = 1/226 (0%)
 Frame = +2

Query: 269 NHETQTLVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYI 448
           NH T  L K  +   LP+         +  +TG+ D   ++++  + E ++  E H + +
Sbjct: 79  NH-TFYLFKVLKAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELNTLEGHRNVV 137

Query: 449 RCIAVH-PTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASA 625
             IA + P    I T S D   KLW  +    C   F GHT  ++ +  NP+ +   A+ 
Sbjct: 138 YAIAFNNPYGDKIATGSFDKTCKLWSVETG-KCYHTFRGHTAEIVCLSFNPQ-STLVATG 195

Query: 626 SLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTC 805
           S+D T K+W + +    +TL GH   +  + + + GD+  +I+G+ D  V +WD      
Sbjct: 196 SMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGDR--IITGSFDHTVVVWDADTGRK 253

Query: 806 VQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLESTL 943
           V  L GH   +S ASF+ +  +I+TGS D T ++W ++  +  +TL
Sbjct: 254 VNILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDATNGKCVATL 299



 Score = 94.4 bits (233), Expect = 2e-19
 Identities = 60/216 (27%), Positives = 103/216 (47%)
 Frame = +2

Query: 263 VWNHETQTLVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSD 442
           +W+ +    V T       + +  F    + ++TG+ D  + V++ +T  +V++   H  
Sbjct: 203 LWDIQNGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRKVNILIGHCA 262

Query: 443 YIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFAS 622
            I   + +     ILT S D   KLWD      C     GH   ++    +       A+
Sbjct: 263 EISSASFNWDCSLILTGSMDKTCKLWD-ATNGKCVATLTGHDDEILDSCFD-YTGKLIAT 320

Query: 623 ASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKT 802
           AS D T +++   +      LEGHE  ++ I +   G+  +L++G+ D+  +IWD Q   
Sbjct: 321 ASADGTARIFSAATRKCIAKLEGHEGEISKISFNPQGN--HLLTGSSDKTARIWDAQTGQ 378

Query: 803 CVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIW 910
           C+Q LEGH   +   +F+ +  I+ITGS+D T RIW
Sbjct: 379 CLQVLEGHTDEIFSCAFNYKGNIVITGSKDNTCRIW 414



 Score = 87.4 bits (215), Expect = 3e-17
 Identities = 61/246 (24%), Positives = 110/246 (44%), Gaps = 3/246 (1%)
 Frame = +2

Query: 263 VWNHETQTLVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSD 442
           +W+ ET     TF      +    F  +   V TG+ D   ++++    E V+    HS 
Sbjct: 161 LWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGEEVYTLRGHSA 220

Query: 443 YIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFAS 622
            I  ++ + +   I+T S D  + +WD D     + +  GH   +     N  D +   +
Sbjct: 221 EIISLSFNTSGDRIITGSFDHTVVVWDADTGRKVN-ILIGHCAEISSASFN-WDCSLILT 278

Query: 623 ASLDRTIKVWQLGSSSPNFTLEGHEKGV--NCIDYYSGGDKPYLISGADDRLVKIWDYQN 796
            S+D+T K+W   +     TL GH+  +  +C DY        + + + D   +I+    
Sbjct: 279 GSMDKTCKLWDATNGKCVATLTGHDDEILDSCFDYTG----KLIATASADGTARIFSAAT 334

Query: 797 KTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVW-CV 973
           + C+  LEGH   +S  SF+P+   ++TGS D T RIW + T +    L    + ++ C 
Sbjct: 335 RKCIAKLEGHEGEISKISFNPQGNHLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCA 394

Query: 974 ASLRGS 991
            + +G+
Sbjct: 395 FNYKGN 400



 Score = 85.9 bits (211), Expect = 7e-17
 Identities = 55/211 (26%), Positives = 93/211 (44%)
 Frame = +2

Query: 356 VVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKK 535
           + TG+ D   ++++  T +  H F  H+  I C++ +P    + T S D   KLWD    
Sbjct: 150 IATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNG 209

Query: 536 WSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCI 715
                   GH+  ++ +  N    ++  + S D T+ VW   +      L GH   ++  
Sbjct: 210 EEV-YTLRGHSAEIISLSFNTS-GDRIITGSFDHTVVVWDADTGRKVNILIGHCAEISSA 267

Query: 716 DYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDG 895
            +    D   +++G+ D+  K+WD  N  CV TL GH   +  + F     +I T S DG
Sbjct: 268 SF--NWDCSLILTGSMDKTCKLWDATNGKCVATLTGHDDEILDSCFDYTGKLIATASADG 325

Query: 896 TVRIWHSSTYRLESTLNYGMERVWCVASLRG 988
           T RI+ ++T +             C+A L G
Sbjct: 326 TARIFSAATRK-------------CIAKLEG 343


  Database: RefSeq49_HP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,297,164
  Number of sequences in database:  32,964
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 53,566,781
Number of extensions: 1443453
Number of successful extensions: 6297
Number of sequences better than 1.0e-05: 161
Number of HSP's gapped: 5026
Number of HSP's successfully gapped: 355
Length of query: 429
Length of database: 18,297,164
Length adjustment: 105
Effective length of query: 324
Effective length of database: 14,835,944
Effective search space: 4806845856
Effective search space used: 4806845856
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-003508
         (1288 letters)

Database: RefSeq49_MP.fasta 
           30,036 sequences; 15,617,559 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_056642.1| coatomer subunit beta' [Mus musculus].               792   0.0  
Alignment   gi|NP_034068.3| coatomer subunit alpha [Mus musculus].               212   6e-55
Alignment   gi|NP_038653.1| platelet-activating factor acetylhydrolase IB s...   118   1e-26
Alignment   gi|NP_536353.2| F-box/WD repeat-containing protein 7 isoform 2 ...   105   8e-23
Alignment   gi|NP_001171245.1| F-box/WD repeat-containing protein 7 isoform...   105   8e-23
Alignment   gi|NP_001171244.1| F-box/WD repeat-containing protein 7 isoform...   105   8e-23
Alignment   gi|NP_083436.2| sperm-associated antigen 16 protein isoform 1 [...   102   5e-22
Alignment   gi|NP_080004.1| sperm-associated antigen 16 protein isoform 2 [...   100   3e-21
Alignment   gi|NP_598776.1| F-box/WD repeat-containing protein 11 [Mus musc...   100   4e-21
Alignment   gi|NP_082016.1| POC1 centriolar protein homolog B [Mus musculus].     99   9e-21

>ref|NP_056642.1| coatomer subunit beta' [Mus musculus].
          Length = 905

 Score =  792 bits (2045), Expect = 0.0
 Identities = 380/382 (99%), Positives = 380/382 (99%)
 Frame = +2

Query: 143  MPLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV 322
            MPLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV
Sbjct: 1    MPLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV 60

Query: 323  RAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDD 502
            RAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDD
Sbjct: 61   RAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDD 120

Query: 503  MLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT 682
            MLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT
Sbjct: 121  MLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT 180

Query: 683  LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPE 862
            LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPE
Sbjct: 181  LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPE 240

Query: 863  LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIVKLG 1042
            LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIVKLG
Sbjct: 241  LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIVKLG 300

Query: 1043 REEPAMSMDANGKIIWAKHSEVQQANLKAMGDAEIKDGERLPLAVKDMGSCEIYPQTIQH 1222
            REEPAMSMDANGKIIWAKHSEVQQANLKAMGD EIKDGERLPLAVKDMGSCEIYPQTIQH
Sbjct: 301  REEPAMSMDANGKIIWAKHSEVQQANLKAMGDTEIKDGERLPLAVKDMGSCEIYPQTIQH 360

Query: 1223 NPNGPFVVVCGDGEYIIYTAMA 1288
            NPNG FVVVCGDGEYIIYTAMA
Sbjct: 361  NPNGRFVVVCGDGEYIIYTAMA 382


>ref|NP_034068.3| coatomer subunit alpha [Mus musculus].
          Length = 1224

 Score =  212 bits (539), Expect = 6e-55
 Identities = 124/367 (33%), Positives = 187/367 (50%), Gaps = 33/367 (8%)
 Frame = +2

Query: 170  KLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARK 349
            K   +S RVK +  HP  PW+L SL+NG + +W++   TL+  F+  D PVR   F  ++
Sbjct: 4    KFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQ 63

Query: 350  NWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWD 529
               V+G DD +I+V+NY     +     H DYIR    H   P+IL++SDD  I++W+W 
Sbjct: 64   PLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQ 123

Query: 530  KKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLG-----SSSP------- 673
             + +C  V  GH HYVM    +P + +   SASLD+T++VW +      + SP       
Sbjct: 124  SR-TCVCVLTGHNHYVMCAQFHPSE-DLVVSASLDQTVRVWDISGLRKKNLSPGAVESDV 181

Query: 674  ----------------NFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTC 805
                               LEGH++GVN   ++     P ++SGADDR VKIW       
Sbjct: 182  RGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHP--TMPLIVSGADDRQVKIWRMNESKA 239

Query: 806  --VQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVAS 979
              V T  GH  NVSCA FHP   +I++ SED ++R+W  S      T     +R W +A+
Sbjct: 240  WEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAA 299

Query: 980  LRGSNNVALGYDEGSIIVKLGREEPAMSMDANGKIIWAKHSEVQQANLKAMGDA---EIK 1150
                N  A G+D G I+ KL RE PA ++  N  + + K   ++Q +  +  D    +++
Sbjct: 300  HPNLNLFAAGHDGGMIVFKLERERPAYAVHGN-MLHYVKDRFLRQLDFNSSKDVAVMQLR 358

Query: 1151 DGERLPL 1171
             G + P+
Sbjct: 359  SGSKFPV 365


>ref|NP_038653.1| platelet-activating factor acetylhydrolase IB subunit alpha [Mus
           musculus].
          Length = 410

 Score =  118 bits (295), Expect = 1e-26
 Identities = 74/279 (26%), Positives = 127/279 (45%), Gaps = 18/279 (6%)
 Frame = +2

Query: 164 KRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVA 343
           K  L+     V  V  HP    M+++  + ++ VW++ET    +T +     V+   F  
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 160

Query: 344 RKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWD 523
               + + + DM I+++++   E +     H   +  +A+ P    I+++S D  IK+W+
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220

Query: 524 WDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKG 703
               + C + F GH  +V  +  N +D    AS S D+T++VW + +      L  HE  
Sbjct: 221 VQTGY-CVKTFTGHREWVRMVRPN-QDGTLIASCSNDQTVRVWVVATKECKAELREHEHV 278

Query: 704 VNCIDYY------------------SGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHA 829
           V CI +                   SG   P+L+SG+ D+ +K+WD     C+ TL GH 
Sbjct: 279 VECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHD 338

Query: 830 QNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLESTLN 946
             V    FH     I++ ++D T+R+W     R   TLN
Sbjct: 339 NWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLN 377



 Score =  115 bits (289), Expect = 6e-26
 Identities = 67/270 (24%), Positives = 126/270 (46%), Gaps = 19/270 (7%)
 Frame = +2

Query: 158 DIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKF 337
           D +R L   +D V+ +    +   + +   + ++ +W+ +    ++T    D  V +   
Sbjct: 141 DFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAI 200

Query: 338 VARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKL 517
           +   + +V+ + D  I+++   T   V  F  H +++R +  +     I + S+D  +++
Sbjct: 201 MPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRV 260

Query: 518 WDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQ-------------------FASASLDRT 640
           W    K  C      H H V  I   P+ +                       S S D+T
Sbjct: 261 WVVATK-ECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKT 319

Query: 641 IKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 820
           IK+W + +     TL GH+  V  + ++SGG   +++S ADD+ +++WDY+NK C++TL 
Sbjct: 320 IKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGK--FILSCADDKTLRVWDYKNKRCMKTLN 377

Query: 821 GHAQNVSCASFHPELPIIITGSEDGTVRIW 910
            H   V+   FH   P ++TGS D TV++W
Sbjct: 378 AHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407



 Score = 92.4 bits (228), Expect = 7e-19
 Identities = 58/223 (26%), Positives = 103/223 (46%)
 Frame = +2

Query: 419  HMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINP 598
            +    H   +  +  HP    ++++S+D  IK+WD++      +  +GHT  V  I  + 
Sbjct: 102  YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG-DFERTLKGHTDSVQDISFD- 159

Query: 599  KDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVK 778
                  AS S D TIK+W         T+ GH+  V+ +     GD  +++S + D+ +K
Sbjct: 160  HSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD--HIVSASRDKTIK 217

Query: 779  IWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLESTLNYGME 958
            +W+ Q   CV+T  GH + V     + +  +I + S D TVR+W  +T   ++ L     
Sbjct: 218  MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEH 277

Query: 959  RVWCVASLRGSNNVALGYDEGSIIVKLGREEPAMSMDANGKII 1087
             V C++    S+  ++    GS   K G+  P +   +  K I
Sbjct: 278  VVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTI 320



 Score = 70.9 bits (172), Expect = 2e-12
 Identities = 53/227 (23%), Positives = 96/227 (42%), Gaps = 20/227 (8%)
 Frame = +2

Query: 167 RKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVAR 346
           R +      V SV + P    ++++  + ++ +W  +T   VKTF      VR  +    
Sbjct: 186 RTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQD 245

Query: 347 KNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQ----------------- 475
              + + ++D  +RV+   T E       H   + CI+  P                   
Sbjct: 246 GTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSG 305

Query: 476 ---PFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIK 646
              PF+L+ S D  IK+WD      C     GH ++V  ++ +        S + D+T++
Sbjct: 306 KPGPFLLSGSRDKTIKMWDVSTGM-CLMTLVGHDNWVRGVLFH-SGGKFILSCADDKTLR 363

Query: 647 VWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWD 787
           VW   +     TL  HE  V  +D++     PY+++G+ D+ VK+W+
Sbjct: 364 VWDYKNKRCMKTLNAHEHFVTSLDFHKTA--PYVVTGSVDQTVKVWE 408


>ref|NP_536353.2| F-box/WD repeat-containing protein 7 isoform 2 [Mus musculus].
          Length = 629

 Score =  105 bits (262), Expect = 8e-23
 Identities = 67/223 (30%), Positives = 113/223 (50%), Gaps = 3/223 (1%)
 Frame = +2

Query: 263 VWNHETQTLVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSD 442
           VWN ET   + T       VR      ++  VV+G+ D  +RV++  T + +H+   H  
Sbjct: 367 VWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWDIETGQCLHVLMGHVA 424

Query: 443 YIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFAS 622
            +RC+     +  +++ + D ++K+WD + + +C    +GHT+ V  +     D     S
Sbjct: 425 AVRCVQYDGRR--VVSGAYDFMVKVWDPETE-TCLHTLQGHTNRVYSLQF---DGIHVVS 478

Query: 623 ASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKT 802
            SLD +I+VW + + +   TL GH+   + ++         L+SG  D  VKIWD +   
Sbjct: 479 GSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN----ILVSGNADSTVKIWDIKTGQ 534

Query: 803 CVQTLEG---HAQNVSCASFHPELPIIITGSEDGTVRIWHSST 922
           C+QTL+G   H   V+C  F+     +IT S+DGTV++W   T
Sbjct: 535 CLQTLQGPSKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLKT 575



 Score = 87.4 bits (215), Expect = 2e-17
 Identities = 56/198 (28%), Positives = 98/198 (49%)
 Frame = +2

Query: 350 NWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWD 529
           N +V+G+DD  ++V++  T + +     H+  +    +      I++ S D  +K+W+ +
Sbjct: 314 NRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAE 371

Query: 530 KKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVN 709
               C     GHT  V  + ++ K   +  S S D T++VW + +      L GH   V 
Sbjct: 372 TG-ECIHTLYGHTSTVRCMHLHEK---RVVSGSRDATLRVWDIETGQCLHVLMGHVAAVR 427

Query: 710 CIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSE 889
           C+ Y    D   ++SGA D +VK+WD + +TC+ TL+GH   V    F  +   +++GS 
Sbjct: 428 CVQY----DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSL 481

Query: 890 DGTVRIWHSSTYRLESTL 943
           D ++R+W   T     TL
Sbjct: 482 DTSIRVWDVETGNCIHTL 499



 Score = 72.4 bits (176), Expect = 7e-13
 Identities = 49/156 (31%), Positives = 74/156 (47%)
 Frame = +2

Query: 548  QVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYS 727
            +V +GH  +V+  +      N+  S S D T+KVW   +     TL GH  GV    + S
Sbjct: 296  KVLKGHDDHVITCL--QFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV----WSS 349

Query: 728  GGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRI 907
                  +ISG+ DR +K+W+ +   C+ TL GH   V C   H +   +++GS D T+R+
Sbjct: 350  QMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRV 407

Query: 908  WHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYD 1015
            W   T +    L   +  V CV    G   V+  YD
Sbjct: 408  WDIETGQCLHVLMGHVAAVRCV-QYDGRRVVSGAYD 442



 Score = 68.2 bits (165), Expect = 1e-11
 Identities = 50/218 (22%), Positives = 103/218 (47%), Gaps = 3/218 (1%)
 Frame = +2

Query: 173 LTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARKN 352
           L   +  V+ + LH  E  +++   + ++ VW+ ET   +         VR  ++  R+ 
Sbjct: 379 LYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRR- 435

Query: 353 WVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDK 532
            VV+GA D  ++V++  T   +H  + H++ +  +        +++ S D  I++WD + 
Sbjct: 436 -VVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIH--VVSGSLDTSIRVWDVET 492

Query: 533 KWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEG---HEKG 703
             +C     GH      + +    +N   S + D T+K+W + +     TL+G   H+  
Sbjct: 493 G-NCIHTLTGHQSLTSGMELK---DNILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSA 548

Query: 704 VNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTL 817
           V C+ +    +K ++I+ +DD  VK+WD +    ++ L
Sbjct: 549 VTCLQF----NKNFVITSSDDGTVKLWDLKTGEFIRNL 582


>ref|NP_001171245.1| F-box/WD repeat-containing protein 7 isoform 1 [Mus musculus].
          Length = 710

 Score =  105 bits (262), Expect = 8e-23
 Identities = 67/223 (30%), Positives = 113/223 (50%), Gaps = 3/223 (1%)
 Frame = +2

Query: 263  VWNHETQTLVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSD 442
            VWN ET   + T       VR      ++  VV+G+ D  +RV++  T + +H+   H  
Sbjct: 448  VWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWDIETGQCLHVLMGHVA 505

Query: 443  YIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFAS 622
             +RC+     +  +++ + D ++K+WD + + +C    +GHT+ V  +     D     S
Sbjct: 506  AVRCVQYDGRR--VVSGAYDFMVKVWDPETE-TCLHTLQGHTNRVYSLQF---DGIHVVS 559

Query: 623  ASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKT 802
             SLD +I+VW + + +   TL GH+   + ++         L+SG  D  VKIWD +   
Sbjct: 560  GSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN----ILVSGNADSTVKIWDIKTGQ 615

Query: 803  CVQTLEG---HAQNVSCASFHPELPIIITGSEDGTVRIWHSST 922
            C+QTL+G   H   V+C  F+     +IT S+DGTV++W   T
Sbjct: 616  CLQTLQGPSKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLKT 656



 Score = 87.4 bits (215), Expect = 2e-17
 Identities = 56/198 (28%), Positives = 98/198 (49%)
 Frame = +2

Query: 350 NWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWD 529
           N +V+G+DD  ++V++  T + +     H+  +    +      I++ S D  +K+W+ +
Sbjct: 395 NRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAE 452

Query: 530 KKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVN 709
               C     GHT  V  + ++ K   +  S S D T++VW + +      L GH   V 
Sbjct: 453 TG-ECIHTLYGHTSTVRCMHLHEK---RVVSGSRDATLRVWDIETGQCLHVLMGHVAAVR 508

Query: 710 CIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSE 889
           C+ Y    D   ++SGA D +VK+WD + +TC+ TL+GH   V    F  +   +++GS 
Sbjct: 509 CVQY----DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSL 562

Query: 890 DGTVRIWHSSTYRLESTL 943
           D ++R+W   T     TL
Sbjct: 563 DTSIRVWDVETGNCIHTL 580



 Score = 72.4 bits (176), Expect = 7e-13
 Identities = 49/156 (31%), Positives = 74/156 (47%)
 Frame = +2

Query: 548  QVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYS 727
            +V +GH  +V+  +      N+  S S D T+KVW   +     TL GH  GV    + S
Sbjct: 377  KVLKGHDDHVITCL--QFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV----WSS 430

Query: 728  GGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRI 907
                  +ISG+ DR +K+W+ +   C+ TL GH   V C   H +   +++GS D T+R+
Sbjct: 431  QMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRV 488

Query: 908  WHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYD 1015
            W   T +    L   +  V CV    G   V+  YD
Sbjct: 489  WDIETGQCLHVLMGHVAAVRCV-QYDGRRVVSGAYD 523



 Score = 68.2 bits (165), Expect = 1e-11
 Identities = 50/218 (22%), Positives = 103/218 (47%), Gaps = 3/218 (1%)
 Frame = +2

Query: 173  LTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARKN 352
            L   +  V+ + LH  E  +++   + ++ VW+ ET   +         VR  ++  R+ 
Sbjct: 460  LYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRR- 516

Query: 353  WVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDK 532
             VV+GA D  ++V++  T   +H  + H++ +  +        +++ S D  I++WD + 
Sbjct: 517  -VVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIH--VVSGSLDTSIRVWDVET 573

Query: 533  KWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEG---HEKG 703
              +C     GH      + +    +N   S + D T+K+W + +     TL+G   H+  
Sbjct: 574  G-NCIHTLTGHQSLTSGMELK---DNILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSA 629

Query: 704  VNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTL 817
            V C+ +    +K ++I+ +DD  VK+WD +    ++ L
Sbjct: 630  VTCLQF----NKNFVITSSDDGTVKLWDLKTGEFIRNL 663


>ref|NP_001171244.1| F-box/WD repeat-containing protein 7 isoform 1 [Mus musculus].
          Length = 710

 Score =  105 bits (262), Expect = 8e-23
 Identities = 67/223 (30%), Positives = 113/223 (50%), Gaps = 3/223 (1%)
 Frame = +2

Query: 263  VWNHETQTLVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSD 442
            VWN ET   + T       VR      ++  VV+G+ D  +RV++  T + +H+   H  
Sbjct: 448  VWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWDIETGQCLHVLMGHVA 505

Query: 443  YIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFAS 622
             +RC+     +  +++ + D ++K+WD + + +C    +GHT+ V  +     D     S
Sbjct: 506  AVRCVQYDGRR--VVSGAYDFMVKVWDPETE-TCLHTLQGHTNRVYSLQF---DGIHVVS 559

Query: 623  ASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKT 802
             SLD +I+VW + + +   TL GH+   + ++         L+SG  D  VKIWD +   
Sbjct: 560  GSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN----ILVSGNADSTVKIWDIKTGQ 615

Query: 803  CVQTLEG---HAQNVSCASFHPELPIIITGSEDGTVRIWHSST 922
            C+QTL+G   H   V+C  F+     +IT S+DGTV++W   T
Sbjct: 616  CLQTLQGPSKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLKT 656



 Score = 87.4 bits (215), Expect = 2e-17
 Identities = 56/198 (28%), Positives = 98/198 (49%)
 Frame = +2

Query: 350 NWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWD 529
           N +V+G+DD  ++V++  T + +     H+  +    +      I++ S D  +K+W+ +
Sbjct: 395 NRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAE 452

Query: 530 KKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVN 709
               C     GHT  V  + ++ K   +  S S D T++VW + +      L GH   V 
Sbjct: 453 TG-ECIHTLYGHTSTVRCMHLHEK---RVVSGSRDATLRVWDIETGQCLHVLMGHVAAVR 508

Query: 710 CIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSE 889
           C+ Y    D   ++SGA D +VK+WD + +TC+ TL+GH   V    F  +   +++GS 
Sbjct: 509 CVQY----DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSL 562

Query: 890 DGTVRIWHSSTYRLESTL 943
           D ++R+W   T     TL
Sbjct: 563 DTSIRVWDVETGNCIHTL 580



 Score = 72.4 bits (176), Expect = 7e-13
 Identities = 49/156 (31%), Positives = 74/156 (47%)
 Frame = +2

Query: 548  QVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYS 727
            +V +GH  +V+  +      N+  S S D T+KVW   +     TL GH  GV    + S
Sbjct: 377  KVLKGHDDHVITCL--QFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV----WSS 430

Query: 728  GGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRI 907
                  +ISG+ DR +K+W+ +   C+ TL GH   V C   H +   +++GS D T+R+
Sbjct: 431  QMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRV 488

Query: 908  WHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYD 1015
            W   T +    L   +  V CV    G   V+  YD
Sbjct: 489  WDIETGQCLHVLMGHVAAVRCV-QYDGRRVVSGAYD 523



 Score = 68.2 bits (165), Expect = 1e-11
 Identities = 50/218 (22%), Positives = 103/218 (47%), Gaps = 3/218 (1%)
 Frame = +2

Query: 173  LTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARKN 352
            L   +  V+ + LH  E  +++   + ++ VW+ ET   +         VR  ++  R+ 
Sbjct: 460  LYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRR- 516

Query: 353  WVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDK 532
             VV+GA D  ++V++  T   +H  + H++ +  +        +++ S D  I++WD + 
Sbjct: 517  -VVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIH--VVSGSLDTSIRVWDVET 573

Query: 533  KWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEG---HEKG 703
              +C     GH      + +    +N   S + D T+K+W + +     TL+G   H+  
Sbjct: 574  G-NCIHTLTGHQSLTSGMELK---DNILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSA 629

Query: 704  VNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTL 817
            V C+ +    +K ++I+ +DD  VK+WD +    ++ L
Sbjct: 630  VTCLQF----NKNFVITSSDDGTVKLWDLKTGEFIRNL 663


>ref|NP_083436.2| sperm-associated antigen 16 protein isoform 1 [Mus musculus].
          Length = 639

 Score =  102 bits (255), Expect = 5e-22
 Identities = 66/243 (27%), Positives = 119/243 (48%)
 Frame = +2

Query: 182  RSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARKNWVV 361
            + D    VD+ P +P + +   N S   ++++   +   F + +LPV        +++++
Sbjct: 321  KKDSEFPVDMQP-DPNVTSCTENVSAAKFDYKLNNI---FRLHELPVSCIVMHPCRDYLI 376

Query: 362  TGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWS 541
            + ++D   ++        +     H+D++     HP+   + TSS D  IKLWD +K   
Sbjct: 377  SCSEDRLWKMVGLPQGNVLLTGSGHTDWLSGCCFHPSGSKLATSSGDSTIKLWDLNKG-E 435

Query: 542  CSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDY 721
            C+   EGH H V     +    +  ASASLD T K+W + S    +TL GH   VN I++
Sbjct: 436  CTLTLEGHNHAVWSCTWH-SCGDFVASASLDMTSKIWDVNSERCRYTLYGHTDSVNSIEF 494

Query: 722  YSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTV 901
            +   +   L++ + D+ + +WD +   C Q+L GH  +V+ A+F P   II +    G  
Sbjct: 495  FPFSN--ILLTASADKTLSVWDARTGKCEQSLYGHMHSVNDATFTPRGHIIASCDARGVT 552

Query: 902  RIW 910
            ++W
Sbjct: 553  KLW 555



 Score = 95.5 bits (236), Expect = 8e-20
 Identities = 56/178 (31%), Positives = 93/178 (52%)
 Frame = +2

Query: 419 HMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINP 598
           ++F  H   + CI +HP + ++++ S+D L K+    +  +      GHT ++     +P
Sbjct: 354 NIFRLHELPVSCIVMHPCRDYLISCSEDRLWKMVGLPQG-NVLLTGSGHTDWLSGCCFHP 412

Query: 599 KDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVK 778
              ++ A++S D TIK+W L       TLEGH   V    ++S GD  ++ S + D   K
Sbjct: 413 S-GSKLATSSGDSTIKLWDLNKGECTLTLEGHNHAVWSCTWHSCGD--FVASASLDMTSK 469

Query: 779 IWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLESTLNYG 952
           IWD  ++ C  TL GH  +V+   F P   I++T S D T+ +W + T + E +L YG
Sbjct: 470 IWDVNSERCRYTLYGHTDSVNSIEFFPFSNILLTASADKTLSVWDARTGKCEQSL-YG 526



 Score = 64.3 bits (155), Expect = 2e-10
 Identities = 49/245 (20%), Positives = 101/245 (41%)
 Frame = +2

Query: 176  TARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARKNW 355
            +  +D +     HP+   +  S  + ++ +W+        T E  +  V +  + +  ++
Sbjct: 399  SGHTDWLSGCCFHPSGSKLATSSGDSTIKLWDLNKGECTLTLEGHNHAVWSCTWHSCGDF 458

Query: 356  VVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKK 535
            V + + DM  ++++ N+    +    H+D +  I   P    +LT+S D  + +WD  + 
Sbjct: 459  VASASLDMTSKIWDVNSERCRYTLYGHTDSVNSIEFFPFSNILLTASADKTLSVWD-ART 517

Query: 536  WSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCI 715
              C Q   GH H V      P+  +  AS       K+W      P  +++      N +
Sbjct: 518  GKCEQSLYGHMHSVNDATFTPR-GHIIASCDARGVTKLWDFRKLIPIVSIDVGPSSGNEV 576

Query: 716  DYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDG 895
            ++   G    L   + + ++ + D ++   +  L GH   V    F      + +G  DG
Sbjct: 577  NFDQSG--RVLAQASANGIIHLLDLKSGQ-IHKLVGHESEVHSVVFSHLGENLYSGGSDG 633

Query: 896  TVRIW 910
            T+R+W
Sbjct: 634  TIRLW 638


>ref|NP_080004.1| sperm-associated antigen 16 protein isoform 2 [Mus musculus].
          Length = 310

 Score =  100 bits (248), Expect = 3e-21
 Identities = 59/204 (28%), Positives = 102/204 (50%)
 Frame = +2

Query: 299 FEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQP 478
           F + +LPV        ++++++ ++D   ++        +     H+D++     HP+  
Sbjct: 27  FRLHELPVSCIVMHPCRDYLISCSEDRLWKMVGLPQGNVLLTGSGHTDWLSGCCFHPSGS 86

Query: 479 FILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQL 658
            + TSS D  IKLWD +K   C+   EGH H V     +    +  ASASLD T K+W +
Sbjct: 87  KLATSSGDSTIKLWDLNKG-ECTLTLEGHNHAVWSCTWH-SCGDFVASASLDMTSKIWDV 144

Query: 659 GSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNV 838
            S    +TL GH   VN I+++   +   L++ + D+ + +WD +   C Q+L GH  +V
Sbjct: 145 NSERCRYTLYGHTDSVNSIEFFPFSN--ILLTASADKTLSVWDARTGKCEQSLYGHMHSV 202

Query: 839 SCASFHPELPIIITGSEDGTVRIW 910
           + A+F P   II +    G  ++W
Sbjct: 203 NDATFTPRGHIIASCDARGVTKLW 226



 Score = 95.5 bits (236), Expect = 8e-20
 Identities = 56/178 (31%), Positives = 93/178 (52%)
 Frame = +2

Query: 419 HMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINP 598
           ++F  H   + CI +HP + ++++ S+D L K+    +  +      GHT ++     +P
Sbjct: 25  NIFRLHELPVSCIVMHPCRDYLISCSEDRLWKMVGLPQG-NVLLTGSGHTDWLSGCCFHP 83

Query: 599 KDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVK 778
              ++ A++S D TIK+W L       TLEGH   V    ++S GD  ++ S + D   K
Sbjct: 84  S-GSKLATSSGDSTIKLWDLNKGECTLTLEGHNHAVWSCTWHSCGD--FVASASLDMTSK 140

Query: 779 IWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLESTLNYG 952
           IWD  ++ C  TL GH  +V+   F P   I++T S D T+ +W + T + E +L YG
Sbjct: 141 IWDVNSERCRYTLYGHTDSVNSIEFFPFSNILLTASADKTLSVWDARTGKCEQSL-YG 197



 Score = 64.3 bits (155), Expect = 2e-10
 Identities = 49/245 (20%), Positives = 101/245 (41%)
 Frame = +2

Query: 176 TARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARKNW 355
           +  +D +     HP+   +  S  + ++ +W+        T E  +  V +  + +  ++
Sbjct: 70  SGHTDWLSGCCFHPSGSKLATSSGDSTIKLWDLNKGECTLTLEGHNHAVWSCTWHSCGDF 129

Query: 356 VVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKK 535
           V + + DM  ++++ N+    +    H+D +  I   P    +LT+S D  + +WD  + 
Sbjct: 130 VASASLDMTSKIWDVNSERCRYTLYGHTDSVNSIEFFPFSNILLTASADKTLSVWD-ART 188

Query: 536 WSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCI 715
             C Q   GH H V      P+  +  AS       K+W      P  +++      N +
Sbjct: 189 GKCEQSLYGHMHSVNDATFTPR-GHIIASCDARGVTKLWDFRKLIPIVSIDVGPSSGNEV 247

Query: 716 DYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDG 895
           ++   G    L   + + ++ + D ++   +  L GH   V    F      + +G  DG
Sbjct: 248 NFDQSG--RVLAQASANGIIHLLDLKSGQ-IHKLVGHESEVHSVVFSHLGENLYSGGSDG 304

Query: 896 TVRIW 910
           T+R+W
Sbjct: 305 TIRLW 309


>ref|NP_598776.1| F-box/WD repeat-containing protein 11 [Mus musculus].
          Length = 563

 Score = 99.8 bits (247), Expect = 4e-21
 Identities = 67/251 (26%), Positives = 125/251 (49%), Gaps = 3/251 (1%)
 Frame = +2

Query: 167 RKLTARSDRVKSVD-LHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVA 343
           +++  RS+  K V  L   +  +++ L + S+ +W+  +   +K        V   ++  
Sbjct: 252 QRIQCRSENSKGVYCLQYDDDKIISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQYDE 311

Query: 344 RKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWD 523
           R   +VTG+ D  +RV++ NT E ++    H++ +  + +  +   ++T S D  I +WD
Sbjct: 312 RV--IVTGSSDSTVRVWDVNTGEVLNTLIHHNEAV--LHLRFSNGLMVTCSKDRSIAVWD 367

Query: 524 WDKKWSCS--QVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHE 697
                  +  +V  GH   V  +     D+    SAS DRTIKVW   +     TL GH+
Sbjct: 368 MASATDITLRRVLVGHRAAVNVVDF---DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHK 424

Query: 698 KGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIII 877
           +G+ C+ Y        ++SG+ D  +++WD +   C++ LEGH + V C  F  +   I+
Sbjct: 425 RGIACLQYRD----RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR--IV 478

Query: 878 TGSEDGTVRIW 910
           +G+ DG +++W
Sbjct: 479 SGAYDGKIKVW 489



 Score = 67.0 bits (162), Expect = 3e-11
 Identities = 48/194 (24%), Positives = 89/194 (45%), Gaps = 3/194 (1%)
 Frame = +2

Query: 401 NTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVM 580
           + L+R+     +S  + C+     +  I++   D  IK+WD      C +V  GHT  V+
Sbjct: 249 HNLQRIQCRSENSKGVYCLQYDDDK--IISGLRDNSIKIWD-KSSLECLKVLTGHTGSVL 305

Query: 581 QIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGA 760
            +     D     + S D T++VW + +     TL  H + V  + + +G     +++ +
Sbjct: 306 CLQY---DERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNG----LMVTCS 358

Query: 761 DDRLVKIWDYQNKTCV---QTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYRL 931
            DR + +WD  + T +   + L GH   V+   F  +   I++ S D T+++W +ST   
Sbjct: 359 KDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKY--IVSASGDRTIKVWSTSTCEF 416

Query: 932 ESTLNYGMERVWCV 973
             TLN     + C+
Sbjct: 417 VRTLNGHKRGIACL 430



 Score = 65.5 bits (158), Expect = 9e-11
 Identities = 38/103 (36%), Positives = 55/103 (53%)
 Frame = +2

Query: 692  HEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPI 871
            + KGV C+ Y    D   +ISG  D  +KIWD  +  C++ L GH  +V C  +     +
Sbjct: 260  NSKGVYCLQY----DDDKIISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQYDER--V 313

Query: 872  IITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNV 1000
            I+TGS D TVR+W  +T  + +TL +  E    V  LR SN +
Sbjct: 314  IVTGSSDSTVRVWDVNTGEVLNTLIHHNE---AVLHLRFSNGL 353


>ref|NP_082016.1| POC1 centriolar protein homolog B [Mus musculus].
          Length = 476

 Score = 98.6 bits (244), Expect = 9e-21
 Identities = 63/254 (24%), Positives = 114/254 (44%)
 Frame = +2

Query: 170 KLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARK 349
           +     D V S+   P    + ++  + +V +W  + +     F+    PVR+  F A  
Sbjct: 55  RYVGHKDVVTSLQFSPQGNLLASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADG 114

Query: 350 NWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWD 529
             +VT ++D  I+V++      ++    H+ ++RC    P    I++ S+D  IK+WD  
Sbjct: 115 QLLVTASEDKSIKVWSMFRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTT 174

Query: 530 KKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVN 709
            K  C   F     +   +  NP +    ASA  D  +K+W +  +      + H  GVN
Sbjct: 175 NK-QCVNNFSDSVGFANFVDFNP-NGTCIASAGSDHAVKIWDIRMNKLLQHYQVHSCGVN 232

Query: 710 CIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSE 889
           C+ ++  G+   L++ + D  VK+ D      + TL+GH   V   SF  +  ++ +G  
Sbjct: 233 CLSFHPLGNS--LVTASSDGTVKMLDLIEGRLIYTLQGHTGPVFTVSFSKDGELLTSGGA 290

Query: 890 DGTVRIWHSSTYRL 931
           D  V IW ++   L
Sbjct: 291 DAQVLIWRTNFIHL 304



 Score = 87.8 bits (216), Expect = 2e-17
 Identities = 64/291 (21%), Positives = 125/291 (42%)
 Frame = +2

Query: 161  IKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFV 340
            ++R        + S D  P    +  + ++  + +W+ +       +      V + +F 
Sbjct: 10   LERSFKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFS 69

Query: 341  ARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLW 520
             + N + + + D  +R++  +   +   F+AH+  +R +        ++T+S+D  IK+W
Sbjct: 70   PQGNLLASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQLLVTASEDKSIKVW 129

Query: 521  DWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEK 700
               ++     ++  HTH+V     +P D     S S D+TIK+W   +            
Sbjct: 130  SMFRQRFLYSLYR-HTHWVRCAKFSP-DGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVG 187

Query: 701  GVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIIT 880
              N +D+   G    + S   D  VKIWD +    +Q  + H+  V+C SFHP    ++T
Sbjct: 188  FANFVDFNPNGT--CIASAGSDHAVKIWDIRMNKLLQHYQVHSCGVNCLSFHPLGNSLVT 245

Query: 881  GSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIV 1033
             S DGTV++      RL  TL      V+ V+  +    +  G  +  +++
Sbjct: 246  ASSDGTVKMLDLIEGRLIYTLQGHTGPVFTVSFSKDGELLTSGGADAQVLI 296



 Score = 83.6 bits (205), Expect = 3e-16
 Identities = 52/212 (24%), Positives = 94/212 (44%)
 Frame = +2

Query: 275 ETQTLVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRC 454
           E   L ++F+     + +A F      + T + D  + +++     R + +  H D +  
Sbjct: 6   EDPILERSFKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTS 65

Query: 455 IAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLD 634
           +   P    + ++S D  ++LW  D+K   S+ F+ HT  V  +  +  D     +AS D
Sbjct: 66  LQFSPQGNLLASASRDRTVRLWVLDRKGKSSE-FKAHTAPVRSVDFS-ADGQLLVTASED 123

Query: 635 RTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQT 814
           ++IKVW +      ++L  H   V C  +    D   ++S ++D+ +KIWD  NK CV  
Sbjct: 124 KSIKVWSMFRQRFLYSLYRHTHWVRCAKF--SPDGRLIVSCSEDKTIKIWDTTNKQCVNN 181

Query: 815 LEGHAQNVSCASFHPELPIIITGSEDGTVRIW 910
                   +   F+P    I +   D  V+IW
Sbjct: 182 FSDSVGFANFVDFNPNGTCIASAGSDHAVKIW 213


  Database: RefSeq49_MP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 15,617,559
  Number of sequences in database:  30,036
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 45,807,841
Number of extensions: 1232581
Number of successful extensions: 5459
Number of sequences better than 1.0e-05: 139
Number of HSP's gapped: 4418
Number of HSP's successfully gapped: 323
Length of query: 429
Length of database: 15,617,559
Length adjustment: 104
Effective length of query: 325
Effective length of database: 12,493,815
Effective search space: 4060489875
Effective search space used: 4060489875
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-003508
         (1288 letters)

Database: RefSeq49_SP.fasta 
           24,897 sequences; 11,343,932 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_001926139.3| PREDICTED: coatomer subunit beta' [Sus scrof...   793   0.0  
Alignment   gi|XP_001928732.1| PREDICTED: coatomer subunit alpha isoform 1 ...   212   4e-55
Alignment   gi|XP_001928742.1| PREDICTED: coatomer subunit alpha isoform 2 ...   212   4e-55
Alignment   gi|NP_999415.1| platelet-activating factor acetylhydrolase IB s...   117   2e-26
Alignment   gi|XP_003362067.1| PREDICTED: f-box/WD repeat-containing protei...   105   5e-23
Alignment   gi|XP_003362066.1| PREDICTED: f-box/WD repeat-containing protei...   105   5e-23
Alignment   gi|XP_003362065.1| PREDICTED: f-box/WD repeat-containing protei...   105   5e-23
Alignment   gi|XP_003360782.1| PREDICTED: POC1 centriolar protein homolog B...   100   2e-21
Alignment   gi|XP_001927989.1| PREDICTED: TAF5-like RNA polymerase II p300/...    99   7e-21
Alignment   gi|XP_003132294.2| PREDICTED: POC1 centriolar protein homolog A...    98   9e-21

>ref|XP_001926139.3| PREDICTED: coatomer subunit beta' [Sus scrofa].
          Length = 906

 Score =  793 bits (2049), Expect = 0.0
 Identities = 381/382 (99%), Positives = 381/382 (99%)
 Frame = +2

Query: 143  MPLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV 322
            MPLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV
Sbjct: 1    MPLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV 60

Query: 323  RAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDD 502
            RAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDD
Sbjct: 61   RAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDD 120

Query: 503  MLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT 682
            MLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT
Sbjct: 121  MLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT 180

Query: 683  LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPE 862
            LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPE
Sbjct: 181  LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPE 240

Query: 863  LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIVKLG 1042
            LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIVKLG
Sbjct: 241  LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIVKLG 300

Query: 1043 REEPAMSMDANGKIIWAKHSEVQQANLKAMGDAEIKDGERLPLAVKDMGSCEIYPQTIQH 1222
            REEPAMSMDANGKIIWAKHSEVQQANLKAMGDAEIKDGERLPLAVKDMGSCEIYPQTIQH
Sbjct: 301  REEPAMSMDANGKIIWAKHSEVQQANLKAMGDAEIKDGERLPLAVKDMGSCEIYPQTIQH 360

Query: 1223 NPNGPFVVVCGDGEYIIYTAMA 1288
            NPNG FVVVCGDGEYIIYTAMA
Sbjct: 361  NPNGRFVVVCGDGEYIIYTAMA 382


>ref|XP_001928732.1| PREDICTED: coatomer subunit alpha isoform 1 [Sus scrofa].
          Length = 1233

 Score =  212 bits (539), Expect = 4e-55
 Identities = 124/367 (33%), Positives = 187/367 (50%), Gaps = 33/367 (8%)
 Frame = +2

Query: 170  KLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARK 349
            K   +S RVK +  HP  PW+L SL+NG + +W++   TL+  F+  D PVR   F  ++
Sbjct: 4    KFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQ 63

Query: 350  NWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWD 529
               V+G DD +I+V+NY     +     H DYIR    H   P+IL++SDD  I++W+W 
Sbjct: 64   PLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQ 123

Query: 530  KKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLG-----SSSP------- 673
             + +C  V  GH HYVM    +P + +   SASLD+T++VW +      + SP       
Sbjct: 124  SR-TCVCVLTGHNHYVMCAQFHPSE-DLVVSASLDQTVRVWDISGLRKKNLSPGAVESDV 181

Query: 674  ----------------NFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTC 805
                               LEGH++GVN   ++     P ++SGADDR VKIW       
Sbjct: 182  RGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHP--TMPLIVSGADDRQVKIWRMNESKA 239

Query: 806  --VQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVAS 979
              V T  GH  NVSCA FHP   +I++ SED ++R+W  S      T     +R W +A+
Sbjct: 240  WEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAA 299

Query: 980  LRGSNNVALGYDEGSIIVKLGREEPAMSMDANGKIIWAKHSEVQQANLKAMGDA---EIK 1150
                N  A G+D G I+ KL RE PA ++  N  + + K   ++Q +  +  D    +++
Sbjct: 300  HPNLNLFAAGHDGGMIVFKLERERPAYAVHGN-MLHYVKDRFLRQLDFNSSKDVAVMQLR 358

Query: 1151 DGERLPL 1171
             G + P+
Sbjct: 359  SGSKFPV 365


>ref|XP_001928742.1| PREDICTED: coatomer subunit alpha isoform 2 [Sus scrofa].
          Length = 1224

 Score =  212 bits (539), Expect = 4e-55
 Identities = 124/367 (33%), Positives = 187/367 (50%), Gaps = 33/367 (8%)
 Frame = +2

Query: 170  KLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARK 349
            K   +S RVK +  HP  PW+L SL+NG + +W++   TL+  F+  D PVR   F  ++
Sbjct: 4    KFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQ 63

Query: 350  NWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWD 529
               V+G DD +I+V+NY     +     H DYIR    H   P+IL++SDD  I++W+W 
Sbjct: 64   PLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQ 123

Query: 530  KKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLG-----SSSP------- 673
             + +C  V  GH HYVM    +P + +   SASLD+T++VW +      + SP       
Sbjct: 124  SR-TCVCVLTGHNHYVMCAQFHPSE-DLVVSASLDQTVRVWDISGLRKKNLSPGAVESDV 181

Query: 674  ----------------NFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTC 805
                               LEGH++GVN   ++     P ++SGADDR VKIW       
Sbjct: 182  RGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHP--TMPLIVSGADDRQVKIWRMNESKA 239

Query: 806  --VQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVAS 979
              V T  GH  NVSCA FHP   +I++ SED ++R+W  S      T     +R W +A+
Sbjct: 240  WEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAA 299

Query: 980  LRGSNNVALGYDEGSIIVKLGREEPAMSMDANGKIIWAKHSEVQQANLKAMGDA---EIK 1150
                N  A G+D G I+ KL RE PA ++  N  + + K   ++Q +  +  D    +++
Sbjct: 300  HPNLNLFAAGHDGGMIVFKLERERPAYAVHGN-MLHYVKDRFLRQLDFNSSKDVAVMQLR 358

Query: 1151 DGERLPL 1171
             G + P+
Sbjct: 359  SGSKFPV 365


>ref|NP_999415.1| platelet-activating factor acetylhydrolase IB subunit alpha [Sus
           scrofa].
          Length = 410

 Score =  117 bits (292), Expect = 2e-26
 Identities = 73/279 (26%), Positives = 127/279 (45%), Gaps = 18/279 (6%)
 Frame = +2

Query: 164 KRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVA 343
           K  L+     V  V  HP    M+++  + ++ VW++ET    +T +     V+   F  
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 160

Query: 344 RKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWD 523
               + + + DM I+++++   E +     H   +  +A+ P    I++++ D  IK+W+
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWE 220

Query: 524 WDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKG 703
               + C + F GH  +V  +  N +D    AS S D+T++VW + +      L  HE  
Sbjct: 221 VQTGY-CVKTFTGHREWVRMVRPN-QDGTLIASCSNDQTVRVWVVATKECKAELREHEHV 278

Query: 704 VNCIDYY------------------SGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHA 829
           V CI +                   SG   P+L+SG+ D+ +K+WD     C+ TL GH 
Sbjct: 279 VECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHD 338

Query: 830 QNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLESTLN 946
             V    FH     I++ ++D T+R+W     R   TLN
Sbjct: 339 NWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLN 377



 Score =  117 bits (292), Expect = 2e-26
 Identities = 68/270 (25%), Positives = 126/270 (46%), Gaps = 19/270 (7%)
 Frame = +2

Query: 158 DIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKF 337
           D +R L   +D V+ +    +   + +   + ++ +W+ +    ++T    D  V +   
Sbjct: 141 DFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAI 200

Query: 338 VARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKL 517
           +   + +V+ A D  I+++   T   V  F  H +++R +  +     I + S+D  +++
Sbjct: 201 MPNGDHIVSAARDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRV 260

Query: 518 WDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQ-------------------FASASLDRT 640
           W    K  C      H H V  I   P+ +                       S S D+T
Sbjct: 261 WVVATK-ECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKT 319

Query: 641 IKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 820
           IK+W + +     TL GH+  V  + ++SGG   +++S ADD+ +++WDY+NK C++TL 
Sbjct: 320 IKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGK--FILSCADDKTLRVWDYKNKRCMKTLN 377

Query: 821 GHAQNVSCASFHPELPIIITGSEDGTVRIW 910
            H   V+   FH   P ++TGS D TV++W
Sbjct: 378 AHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407



 Score = 93.6 bits (231), Expect = 2e-19
 Identities = 59/223 (26%), Positives = 103/223 (46%)
 Frame = +2

Query: 419  HMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINP 598
            +    H   +  +  HP    ++++S+D  IK+WD++      +  +GHT  V  I  + 
Sbjct: 102  YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG-DFERTLKGHTDSVQDISFD- 159

Query: 599  KDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVK 778
                  AS S D TIK+W         T+ GH+  V+ +     GD  +++S A D+ +K
Sbjct: 160  HSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD--HIVSAARDKTIK 217

Query: 779  IWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLESTLNYGME 958
            +W+ Q   CV+T  GH + V     + +  +I + S D TVR+W  +T   ++ L     
Sbjct: 218  MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEH 277

Query: 959  RVWCVASLRGSNNVALGYDEGSIIVKLGREEPAMSMDANGKII 1087
             V C++    S+  ++    GS   K G+  P +   +  K I
Sbjct: 278  VVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTI 320



 Score = 71.2 bits (173), Expect = 1e-12
 Identities = 53/227 (23%), Positives = 96/227 (42%), Gaps = 20/227 (8%)
 Frame = +2

Query: 167 RKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVAR 346
           R +      V SV + P    ++++  + ++ +W  +T   VKTF      VR  +    
Sbjct: 186 RTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQD 245

Query: 347 KNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQ----------------- 475
              + + ++D  +RV+   T E       H   + CI+  P                   
Sbjct: 246 GTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSG 305

Query: 476 ---PFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIK 646
              PF+L+ S D  IK+WD      C     GH ++V  ++ +        S + D+T++
Sbjct: 306 KPGPFLLSGSRDKTIKMWDVSTGM-CLMTLVGHDNWVRGVLFH-SGGKFILSCADDKTLR 363

Query: 647 VWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWD 787
           VW   +     TL  HE  V  +D++     PY+++G+ D+ VK+W+
Sbjct: 364 VWDYKNKRCMKTLNAHEHFVTSLDFHKTA--PYVVTGSVDQTVKVWE 408


>ref|XP_003362067.1| PREDICTED: f-box/WD repeat-containing protein 7 isoform 3 [Sus
           scrofa].
          Length = 589

 Score =  105 bits (262), Expect = 5e-23
 Identities = 67/223 (30%), Positives = 113/223 (50%), Gaps = 3/223 (1%)
 Frame = +2

Query: 263 VWNHETQTLVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSD 442
           VWN ET   + T       VR      ++  VV+G+ D  +RV++  T + +H+   H  
Sbjct: 327 VWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWDIETGQCLHVLMGHVA 384

Query: 443 YIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFAS 622
            +RC+     +  +++ + D ++K+WD + + +C    +GHT+ V  +     D     S
Sbjct: 385 AVRCVQYDGRR--VVSGAYDFMVKVWDPETE-TCLHTLQGHTNRVYSLQF---DGIHVVS 438

Query: 623 ASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKT 802
            SLD +I+VW + + +   TL GH+   + ++         L+SG  D  VKIWD +   
Sbjct: 439 GSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN----ILVSGNADSTVKIWDIKTGQ 494

Query: 803 CVQTLEG---HAQNVSCASFHPELPIIITGSEDGTVRIWHSST 922
           C+QTL+G   H   V+C  F+     +IT S+DGTV++W   T
Sbjct: 495 CLQTLQGPNKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLKT 535



 Score = 83.6 bits (205), Expect = 2e-16
 Identities = 54/194 (27%), Positives = 95/194 (48%)
 Frame = +2

Query: 362 TGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWS 541
           +G+DD  ++V++  T + +     H+  +    +      I++ S D  +K+W+ +    
Sbjct: 278 SGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAETG-E 334

Query: 542 CSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDY 721
           C     GHT  V  + ++ K   +  S S D T++VW + +      L GH   V C+ Y
Sbjct: 335 CIHTLYGHTSTVRCMHLHEK---RVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY 391

Query: 722 YSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTV 901
               D   ++SGA D +VK+WD + +TC+ TL+GH   V    F  +   +++GS D ++
Sbjct: 392 ----DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSI 445

Query: 902 RIWHSSTYRLESTL 943
           R+W   T     TL
Sbjct: 446 RVWDVETGNCIHTL 459



 Score = 70.1 bits (170), Expect = 3e-12
 Identities = 49/156 (31%), Positives = 71/156 (45%)
 Frame = +2

Query: 548  QVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYS 727
            +V +GH  +V  I           S S D T+KVW   +     TL GH  GV    + S
Sbjct: 256  KVLKGHDDHV--ITCXXXXXXXXXSGSDDNTLKVWSAVTGKCLRTLVGHTGGV----WSS 309

Query: 728  GGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRI 907
                  +ISG+ DR +K+W+ +   C+ TL GH   V C   H +   +++GS D T+R+
Sbjct: 310  QMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRV 367

Query: 908  WHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYD 1015
            W   T +    L   +  V CV    G   V+  YD
Sbjct: 368  WDIETGQCLHVLMGHVAAVRCV-QYDGRRVVSGAYD 402



 Score = 68.2 bits (165), Expect = 1e-11
 Identities = 50/218 (22%), Positives = 103/218 (47%), Gaps = 3/218 (1%)
 Frame = +2

Query: 173 LTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARKN 352
           L   +  V+ + LH  E  +++   + ++ VW+ ET   +         VR  ++  R+ 
Sbjct: 339 LYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRR- 395

Query: 353 WVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDK 532
            VV+GA D  ++V++  T   +H  + H++ +  +        +++ S D  I++WD + 
Sbjct: 396 -VVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIH--VVSGSLDTSIRVWDVET 452

Query: 533 KWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEG---HEKG 703
             +C     GH      + +    +N   S + D T+K+W + +     TL+G   H+  
Sbjct: 453 G-NCIHTLTGHQSLTSGMELK---DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSA 508

Query: 704 VNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTL 817
           V C+ +    +K ++I+ +DD  VK+WD +    ++ L
Sbjct: 509 VTCLQF----NKNFVITSSDDGTVKLWDLKTGEFIRNL 542


>ref|XP_003362066.1| PREDICTED: f-box/WD repeat-containing protein 7 isoform 2 [Sus
            scrofa].
          Length = 705

 Score =  105 bits (262), Expect = 5e-23
 Identities = 67/223 (30%), Positives = 113/223 (50%), Gaps = 3/223 (1%)
 Frame = +2

Query: 263  VWNHETQTLVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSD 442
            VWN ET   + T       VR      ++  VV+G+ D  +RV++  T + +H+   H  
Sbjct: 443  VWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWDIETGQCLHVLMGHVA 500

Query: 443  YIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFAS 622
             +RC+     +  +++ + D ++K+WD + + +C    +GHT+ V  +     D     S
Sbjct: 501  AVRCVQYDGRR--VVSGAYDFMVKVWDPETE-TCLHTLQGHTNRVYSLQF---DGIHVVS 554

Query: 623  ASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKT 802
             SLD +I+VW + + +   TL GH+   + ++         L+SG  D  VKIWD +   
Sbjct: 555  GSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN----ILVSGNADSTVKIWDIKTGQ 610

Query: 803  CVQTLEG---HAQNVSCASFHPELPIIITGSEDGTVRIWHSST 922
            C+QTL+G   H   V+C  F+     +IT S+DGTV++W   T
Sbjct: 611  CLQTLQGPNKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLKT 651



 Score = 83.6 bits (205), Expect = 2e-16
 Identities = 54/194 (27%), Positives = 95/194 (48%)
 Frame = +2

Query: 362 TGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWS 541
           +G+DD  ++V++  T + +     H+  +    +      I++ S D  +K+W+ +    
Sbjct: 394 SGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAETG-E 450

Query: 542 CSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDY 721
           C     GHT  V  + ++ K   +  S S D T++VW + +      L GH   V C+ Y
Sbjct: 451 CIHTLYGHTSTVRCMHLHEK---RVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY 507

Query: 722 YSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTV 901
               D   ++SGA D +VK+WD + +TC+ TL+GH   V    F  +   +++GS D ++
Sbjct: 508 ----DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSI 561

Query: 902 RIWHSSTYRLESTL 943
           R+W   T     TL
Sbjct: 562 RVWDVETGNCIHTL 575



 Score = 70.1 bits (170), Expect = 3e-12
 Identities = 49/156 (31%), Positives = 71/156 (45%)
 Frame = +2

Query: 548  QVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYS 727
            +V +GH  +V  I           S S D T+KVW   +     TL GH  GV    + S
Sbjct: 372  KVLKGHDDHV--ITCXXXXXXXXXSGSDDNTLKVWSAVTGKCLRTLVGHTGGV----WSS 425

Query: 728  GGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRI 907
                  +ISG+ DR +K+W+ +   C+ TL GH   V C   H +   +++GS D T+R+
Sbjct: 426  QMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRV 483

Query: 908  WHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYD 1015
            W   T +    L   +  V CV    G   V+  YD
Sbjct: 484  WDIETGQCLHVLMGHVAAVRCV-QYDGRRVVSGAYD 518



 Score = 68.2 bits (165), Expect = 1e-11
 Identities = 50/218 (22%), Positives = 103/218 (47%), Gaps = 3/218 (1%)
 Frame = +2

Query: 173  LTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARKN 352
            L   +  V+ + LH  E  +++   + ++ VW+ ET   +         VR  ++  R+ 
Sbjct: 455  LYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRR- 511

Query: 353  WVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDK 532
             VV+GA D  ++V++  T   +H  + H++ +  +        +++ S D  I++WD + 
Sbjct: 512  -VVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIH--VVSGSLDTSIRVWDVET 568

Query: 533  KWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEG---HEKG 703
              +C     GH      + +    +N   S + D T+K+W + +     TL+G   H+  
Sbjct: 569  G-NCIHTLTGHQSLTSGMELK---DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSA 624

Query: 704  VNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTL 817
            V C+ +    +K ++I+ +DD  VK+WD +    ++ L
Sbjct: 625  VTCLQF----NKNFVITSSDDGTVKLWDLKTGEFIRNL 658


>ref|XP_003362065.1| PREDICTED: f-box/WD repeat-containing protein 7 isoform 1 [Sus
           scrofa].
          Length = 627

 Score =  105 bits (262), Expect = 5e-23
 Identities = 67/223 (30%), Positives = 113/223 (50%), Gaps = 3/223 (1%)
 Frame = +2

Query: 263 VWNHETQTLVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSD 442
           VWN ET   + T       VR      ++  VV+G+ D  +RV++  T + +H+   H  
Sbjct: 365 VWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWDIETGQCLHVLMGHVA 422

Query: 443 YIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFAS 622
            +RC+     +  +++ + D ++K+WD + + +C    +GHT+ V  +     D     S
Sbjct: 423 AVRCVQYDGRR--VVSGAYDFMVKVWDPETE-TCLHTLQGHTNRVYSLQF---DGIHVVS 476

Query: 623 ASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKT 802
            SLD +I+VW + + +   TL GH+   + ++         L+SG  D  VKIWD +   
Sbjct: 477 GSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN----ILVSGNADSTVKIWDIKTGQ 532

Query: 803 CVQTLEG---HAQNVSCASFHPELPIIITGSEDGTVRIWHSST 922
           C+QTL+G   H   V+C  F+     +IT S+DGTV++W   T
Sbjct: 533 CLQTLQGPNKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLKT 573



 Score = 83.6 bits (205), Expect = 2e-16
 Identities = 54/194 (27%), Positives = 95/194 (48%)
 Frame = +2

Query: 362 TGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWS 541
           +G+DD  ++V++  T + +     H+  +    +      I++ S D  +K+W+ +    
Sbjct: 316 SGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAETG-E 372

Query: 542 CSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDY 721
           C     GHT  V  + ++ K   +  S S D T++VW + +      L GH   V C+ Y
Sbjct: 373 CIHTLYGHTSTVRCMHLHEK---RVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY 429

Query: 722 YSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTV 901
               D   ++SGA D +VK+WD + +TC+ TL+GH   V    F  +   +++GS D ++
Sbjct: 430 ----DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSI 483

Query: 902 RIWHSSTYRLESTL 943
           R+W   T     TL
Sbjct: 484 RVWDVETGNCIHTL 497



 Score = 70.1 bits (170), Expect = 3e-12
 Identities = 49/156 (31%), Positives = 71/156 (45%)
 Frame = +2

Query: 548  QVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYS 727
            +V +GH  +V  I           S S D T+KVW   +     TL GH  GV    + S
Sbjct: 294  KVLKGHDDHV--ITCXXXXXXXXXSGSDDNTLKVWSAVTGKCLRTLVGHTGGV----WSS 347

Query: 728  GGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRI 907
                  +ISG+ DR +K+W+ +   C+ TL GH   V C   H +   +++GS D T+R+
Sbjct: 348  QMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRV 405

Query: 908  WHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYD 1015
            W   T +    L   +  V CV    G   V+  YD
Sbjct: 406  WDIETGQCLHVLMGHVAAVRCV-QYDGRRVVSGAYD 440



 Score = 68.2 bits (165), Expect = 1e-11
 Identities = 50/218 (22%), Positives = 103/218 (47%), Gaps = 3/218 (1%)
 Frame = +2

Query: 173 LTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARKN 352
           L   +  V+ + LH  E  +++   + ++ VW+ ET   +         VR  ++  R+ 
Sbjct: 377 LYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRR- 433

Query: 353 WVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDK 532
            VV+GA D  ++V++  T   +H  + H++ +  +        +++ S D  I++WD + 
Sbjct: 434 -VVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIH--VVSGSLDTSIRVWDVET 490

Query: 533 KWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEG---HEKG 703
             +C     GH      + +    +N   S + D T+K+W + +     TL+G   H+  
Sbjct: 491 G-NCIHTLTGHQSLTSGMELK---DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSA 546

Query: 704 VNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTL 817
           V C+ +    +K ++I+ +DD  VK+WD +    ++ L
Sbjct: 547 VTCLQF----NKNFVITSSDDGTVKLWDLKTGEFIRNL 580


>ref|XP_003360782.1| PREDICTED: POC1 centriolar protein homolog B-like, partial [Sus
           scrofa].
          Length = 416

 Score =  100 bits (249), Expect = 2e-21
 Identities = 63/250 (25%), Positives = 110/250 (44%)
 Frame = +2

Query: 170 KLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARK 349
           +     D V SV   P    + ++  + +V +W  + +     F+    PVR+  F A  
Sbjct: 100 RYVGHKDVVTSVQFSPLGNLLASASRDRTVRLWIPDKRGKSSEFKAHTAPVRSVDFSADG 159

Query: 350 NWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWD 529
            ++ T ++D  I     +    ++    H+ ++RC    P    I++ S+D  IK+WD  
Sbjct: 160 QFLATASEDKSIXXXXXHRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTT 219

Query: 530 KKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVN 709
            K  C   F     +   +  NP +    ASA  D T+K+W +  +      + H  GVN
Sbjct: 220 NK-QCVNNFSDFVGFANFVDFNP-NGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVN 277

Query: 710 CIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSE 889
           C+ ++  G+  YLI+ + D  +KI D      + TL+GH   V   SF     +  +G  
Sbjct: 278 CVSFHPSGN--YLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFTSGGA 335

Query: 890 DGTVRIWHSS 919
           D  V +W ++
Sbjct: 336 DAQVLLWRTN 345



 Score = 82.8 bits (203), Expect = 4e-16
 Identities = 79/337 (23%), Positives = 132/337 (39%), Gaps = 7/337 (2%)
 Frame = +2

Query: 44   PRQSVGGSVVRWVCLGTASPVASEDARTWTDGAMPLRLDIKRKLTARSDRVKSVDLHPTE 223
            PR  +  S   W      SP        W     P RL   R L A S     +      
Sbjct: 10   PRSGIAASD-EWHFSYIGSPGPHARTXEWNTRLSPWRLASIRLLRASSPCSLFLPTPADT 68

Query: 224  PWMLASL-------YNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARKNWVVTGADDMQ 382
            P  L  L       ++  + +W+ + Q     +      V + +F    N + + + D  
Sbjct: 69   PVSLRFLRLPTTGSWDTFLMLWSFKPQARAFRYVGHKDVVTSVQFSPLGNLLASASRDRT 128

Query: 383  IRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEG 562
            +R++  +   +   F+AH+  +R +       F+ T+S+D  I      ++     ++  
Sbjct: 129  VRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLATASEDKSIXXXXXHRQRFLYSLYR- 187

Query: 563  HTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKP 742
            HTH+V     +P D     S S D+TIK+W   +              N +D+   G   
Sbjct: 188  HTHWVRCAKFSP-DGRLIVSCSEDKTIKIWDTTNKQCVNNFSDFVGFANFVDFNPNGT-- 244

Query: 743  YLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSST 922
             + S   D  VKIWD +    +Q  + H+  V+C SFHP    +IT S DGT++I     
Sbjct: 245  CIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYLITASSDGTLKILDLLE 304

Query: 923  YRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIV 1033
             RL  TL      V+ V+  +G      G  +  +++
Sbjct: 305  GRLIYTLQGHTGPVFTVSFSKGGELFTSGGADAQVLL 341


>ref|XP_001927989.1| PREDICTED: TAF5-like RNA polymerase II p300/CBP-associated
           factor-associated factor 65 kDa subunit 5L [Sus scrofa].
          Length = 589

 Score = 98.6 bits (244), Expect = 7e-21
 Identities = 54/200 (27%), Positives = 108/200 (54%), Gaps = 2/200 (1%)
 Frame = +2

Query: 317 PVRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSS 496
           PV + +F+A  + +++ ++DM IR ++  +     +++ H+  +  + + P   +  + S
Sbjct: 344 PVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDVDISPYSLYFASGS 403

Query: 497 DDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVW--QLGSSS 670
            D   +LW +D+ +   +++ GH   V  +  +P ++N  A+ S D+T+++W  Q G+S 
Sbjct: 404 HDRTARLWSFDRTYPL-RIYAGHLADVDCVKFHP-NSNYLATGSTDKTVRLWSAQQGNSV 461

Query: 671 PNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCAS 850
             FT  GH   V  + +   G   YL S  +D+ +K+WD  + T  + L GH  N++  +
Sbjct: 462 RLFT--GHRGPVLSLAFSPNGK--YLASAGEDQRLKLWDLASGTLFKELRGHTDNITSLT 517

Query: 851 FHPELPIIITGSEDGTVRIW 910
           F P+  +I + S D +VR+W
Sbjct: 518 FSPDSSLIASASMDNSVRVW 537



 Score = 77.0 bits (188), Expect = 2e-14
 Identities = 47/184 (25%), Positives = 90/184 (48%)
 Frame = +2

Query: 482  ILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLG 661
            +L+ S+DM I+ WD    ++ + +++GH + V  + I+P  +  FAS S DRT ++W   
Sbjct: 357  LLSCSEDMSIRYWDLGS-FTNTVLYQGHAYPVWDVDISPY-SLYFASGSHDRTARLWSFD 414

Query: 662  SSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVS 841
             + P     GH   V+C+ ++   +  YL +G+ D+ V++W  Q    V+   GH   V 
Sbjct: 415  RTYPLRIYAGHLADVDCVKFHPNSN--YLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVL 472

Query: 842  CASFHPELPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEG 1021
              +F P    + +  ED  +++W  ++  L   L    + +  +     S+ +A    + 
Sbjct: 473  SLAFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDNITSLTFSPDSSLIASASMDN 532

Query: 1022 SIIV 1033
            S+ V
Sbjct: 533  SVRV 536



 Score = 66.2 bits (160), Expect = 4e-11
 Identities = 36/166 (21%), Positives = 80/166 (48%)
 Frame = +2

Query: 194 VKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARKNWVVTGAD 373
           V  VD+ P   +  +  ++ +  +W+ +    ++ +      V   KF    N++ TG+ 
Sbjct: 387 VWDVDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGST 446

Query: 374 DMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQV 553
           D  +R+++      V +F  H   +  +A  P   ++ ++ +D  +KLWD     +  + 
Sbjct: 447 DKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDL-ASGTLFKE 505

Query: 554 FEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEG 691
             GHT  +  +  +P D++  ASAS+D +++VW + ++  +   +G
Sbjct: 506 LRGHTDNITSLTFSP-DSSLIASASMDNSVRVWDIRNTHCSAPTDG 550


>ref|XP_003132294.2| PREDICTED: POC1 centriolar protein homolog A-like [Sus scrofa].
          Length = 344

 Score = 98.2 bits (243), Expect = 9e-21
 Identities = 58/204 (28%), Positives = 92/204 (45%)
 Frame = +2

Query: 320 VRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSD 499
           V    F      + +G+ D  + V++     R + F  H D + C+   P+   + + S 
Sbjct: 22  VTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSR 81

Query: 500 DMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNF 679
           D  +++W  + K   S VF  HT  V  +     D   F +AS D+TIKVW        F
Sbjct: 82  DKTVRIWVPNIKGE-STVFRAHTATVRSVHFC-SDGQSFVTASDDKTIKVWSTHRQKFLF 139

Query: 680 TLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHP 859
           +L  H   V C  +   G    ++S +DD+ VK+WD  ++ CV +   H   V+   FHP
Sbjct: 140 SLSQHINWVRCAKFSPDGR--LIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHP 197

Query: 860 ELPIIITGSEDGTVRIWHSSTYRL 931
               +     D TV++W   T+RL
Sbjct: 198 SGTCVAAAGMDNTVKVWDVRTHRL 221



 Score = 94.7 bits (234), Expect = 1e-19
 Identities = 60/250 (24%), Positives = 110/250 (44%)
 Frame = +2

Query: 170 KLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARK 349
           + T   D V  V+  P+   + +   + +V +W    +     F      VR+  F +  
Sbjct: 56  RFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDG 115

Query: 350 NWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWD 529
              VT +DD  I+V++ +  + +     H +++RC    P    I+++SDD  +KLWD  
Sbjct: 116 QSFVTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKT 175

Query: 530 KKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVN 709
            +  C   +  H  +V  +  +P      A+A +D T+KVW + +       + H   VN
Sbjct: 176 SR-ECVHSYCEHGGFVTYVDFHP-SGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVN 233

Query: 710 CIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSE 889
            + ++  G+  YL++ + D  +KI D      + TL GH    +  +F        +G  
Sbjct: 234 ALSFHPSGN--YLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGS 291

Query: 890 DGTVRIWHSS 919
           D  V +W S+
Sbjct: 292 DEQVMVWKSN 301



 Score = 86.7 bits (213), Expect = 3e-17
 Identities = 72/294 (24%), Positives = 124/294 (42%), Gaps = 3/294 (1%)
 Frame = +2

Query: 161  IKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFV 340
            ++R      D V  VD       + +   +  + VW+ + Q+    F      V    F 
Sbjct: 11   LERHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFS 70

Query: 341  ARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLW 520
               + + +G+ D  +R++  N      +F AH+  +R +         +T+SDD  IK+W
Sbjct: 71   PSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVW 130

Query: 521  DWDKK---WSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEG 691
               ++   +S SQ    H ++V     +P D     SAS D+T+K+W   S     +   
Sbjct: 131  STHRQKFLFSLSQ----HINWVRCAKFSP-DGRLIVSASDDKTVKLWDKTSRECVHSYCE 185

Query: 692  HEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPI 871
            H   V  +D++  G    + +   D  VK+WD +    +Q  + H+  V+  SFHP    
Sbjct: 186  HGGFVTYVDFHPSGT--CVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNY 243

Query: 872  IITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIV 1033
            ++T S D T++I      RL  TL+        VA  R     A G  +  ++V
Sbjct: 244  LVTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMV 297


  Database: RefSeq49_SP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 11,343,932
  Number of sequences in database:  24,897
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 33,345,918
Number of extensions: 895553
Number of successful extensions: 4014
Number of sequences better than 1.0e-05: 105
Number of HSP's gapped: 3219
Number of HSP's successfully gapped: 227
Length of query: 429
Length of database: 11,343,932
Length adjustment: 102
Effective length of query: 327
Effective length of database: 8,804,438
Effective search space: 2879051226
Effective search space used: 2879051226
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-003508
         (1288 letters)

Database: Sscrofa_10.2.fasta 
           4582 sequences; 2,808,509,378 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Sscrofa_Chr13                                                         398   e-108

>Sscrofa_Chr13 
||          Length = 218635234

 Score =  398 bits (201), Expect = e-108
 Identities = 201/201 (100%)
 Strand = Plus / Minus

                                                                            
Query: 1035     agcttggtcgggaggaacctgccatgtccatggatgccaatggaaagataatttgggcca 1094
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87913378 agcttggtcgggaggaacctgccatgtccatggatgccaatggaaagataatttgggcca 87913319

                                                                            
Query: 1095     aacattcagaggtccagcaggccaacctaaaagcaatgggagatgctgaaattaaagatg 1154
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87913318 aacattcagaggtccagcaggccaacctaaaagcaatgggagatgctgaaattaaagatg 87913259

                                                                            
Query: 1155     gagaaagattgccactggcagtaaaggatatgggcagttgtgaaatataccctcagacta 1214
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87913258 gagaaagattgccactggcagtaaaggatatgggcagttgtgaaatataccctcagacta 87913199

                                     
Query: 1215     ttcagcacaatcctaatgggc 1235
                |||||||||||||||||||||
Sbjct: 87913198 ttcagcacaatcctaatgggc 87913178



 Score =  301 bits (152), Expect = 5e-79
 Identities = 152/152 (100%)
 Strand = Plus / Minus

                                                                            
Query: 497      gatgacatgcttattaaactctgggactgggataaaaaatggtcttgctcacaagtgttt 556
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87918777 gatgacatgcttattaaactctgggactgggataaaaaatggtcttgctcacaagtgttt 87918718

                                                                            
Query: 557      gaaggacacacccattatgttatgcagattgtgatcaaccccaaagataacaaccagttt 616
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87918717 gaaggacacacccattatgttatgcagattgtgatcaaccccaaagataacaaccagttt 87918658

                                                
Query: 617      gccagcgcttctttggacaggactatcaaggt 648
                ||||||||||||||||||||||||||||||||
Sbjct: 87918657 gccagcgcttctttggacaggactatcaaggt 87918626



 Score =  297 bits (150), Expect = 8e-78
 Identities = 150/150 (100%)
 Strand = Plus / Minus

                                                                            
Query: 644      aaggtgtggcagctgggctcctcatcaccaaacttcactctggagggacatgagaaaggc 703
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87916446 aaggtgtggcagctgggctcctcatcaccaaacttcactctggagggacatgagaaaggc 87916387

                                                                            
Query: 704      gtgaattgcatcgattactacagtggtggcgacaagccatacctcatttcaggtgcagat 763
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87916386 gtgaattgcatcgattactacagtggtggcgacaagccatacctcatttcaggtgcagat 87916327

                                              
Query: 764      gaccgtcttgtgaaaatatgggactatcag 793
                ||||||||||||||||||||||||||||||
Sbjct: 87916326 gaccgtcttgtgaaaatatgggactatcag 87916297



 Score =  285 bits (144), Expect = 3e-74
 Identities = 144/144 (100%)
 Strand = Plus / Minus

                                                                            
Query: 893      ggaactgtgcgaatttggcattcaagcacctatcgcctcgagagtaccttgaattatgga 952
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87913752 ggaactgtgcgaatttggcattcaagcacctatcgcctcgagagtaccttgaattatgga 87913693

                                                                            
Query: 953      atggagagggtgtggtgtgtggccagtctgagagggtccaacaacgttgctttgggctat 1012
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87913692 atggagagggtgtggtgtgtggccagtctgagagggtccaacaacgttgctttgggctat 87913633

                                        
Query: 1013     gatgaagggagcatcattgttaag 1036
                ||||||||||||||||||||||||
Sbjct: 87913632 gatgaagggagcatcattgttaag 87913609



 Score =  276 bits (139), Expect = 3e-71
 Identities = 139/139 (100%)
 Strand = Plus / Minus

                                                                            
Query: 145      gcctctgcgactcgatatcaagagaaagctaactgctcgatccgatagagttaagagtgt 204
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87924720 gcctctgcgactcgatatcaagagaaagctaactgctcgatccgatagagttaagagtgt 87924661

                                                                            
Query: 205      ggatttgcatcctacagagccatggatgttggcgagtctttacaatggcagtgtgtgtgt 264
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87924660 ggatttgcatcctacagagccatggatgttggcgagtctttacaatggcagtgtgtgtgt 87924601

                                   
Query: 265      ttggaatcatgaaacacag 283
                |||||||||||||||||||
Sbjct: 87924600 ttggaatcatgaaacacag 87924582



 Score =  254 bits (128), Expect = 1e-64
 Identities = 128/128 (100%)
 Strand = Plus / Minus

                                                                            
Query: 370      ggatgacatgcaaattagagtgttcaactacaacactctggagagagttcatatgtttga 429
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87920038 ggatgacatgcaaattagagtgttcaactacaacactctggagagagttcatatgtttga 87919979

                                                                            
Query: 430      agcgcattcagactacattcgatgtattgccgttcatccaacccagcctttcattctaac 489
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87919978 agcgcattcagactacattcgatgtattgccgttcatccaacccagcctttcattctaac 87919919

                        
Query: 490      tagcagtg 497
                ||||||||
Sbjct: 87919918 tagcagtg 87919911



 Score =  224 bits (113), Expect = 9e-56
 Identities = 122/125 (97%)
 Strand = Plus / Minus

                                                                            
Query: 17       ctatcgcgagaactcctcccggaagttccacgtcagtccgtcggcgggtcagtggttcgg 76
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||
Sbjct: 87931032 ctatcgcgagaactcctcccggaagttccacgtcagtccgtcggcgggtcagtggtaagg 87930973

                                                                            
Query: 77       tgggtctgtcttgggactgcttcgccggtagcaagcgaggacgcccggacttggaccgac 136
                |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 87930972 tgggtctgtcttgggactgctttgccggtagcaagcgaggacgcccggacttggaccgac 87930913

                     
Query: 137      ggagc 141
                |||||
Sbjct: 87930912 ggagc 87930908



 Score =  206 bits (104), Expect = 2e-50
 Identities = 104/104 (100%)
 Strand = Plus / Minus

                                                                            
Query: 791      cagaataaaacatgtgtgcaaacgctggaggggcacgcccaaaacgtgtcttgtgccagt 850
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87914484 cagaataaaacatgtgtgcaaacgctggaggggcacgcccaaaacgtgtcttgtgccagt 87914425

                                                            
Query: 851      tttcatcctgagctgccaatcatcatcacaggttcagaggatgg 894
                ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87914424 tttcatcctgagctgccaatcatcatcacaggttcagaggatgg 87914381



 Score =  178 bits (90), Expect = 5e-42
 Identities = 90/90 (100%)
 Strand = Plus / Minus

                                                                            
Query: 282      agacactggtgaaaacattcgaagtatgtgatcttcctgttcgagccgcaaagtttgttg 341
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87920318 agacactggtgaaaacattcgaagtatgtgatcttcctgttcgagccgcaaagtttgttg 87920259

                                              
Query: 342      caaggaagaattgggttgtgacaggagcgg 371
                ||||||||||||||||||||||||||||||
Sbjct: 87920258 caaggaagaattgggttgtgacaggagcgg 87920229



 Score =  103 bits (52), Expect = 2e-19
 Identities = 52/52 (100%)
 Strand = Plus / Minus

                                                                    
Query: 1237     gtttgttgtggtgtgtggtgatggcgagtatatcatctatacggcaatggcc 1288
                ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87911983 gtttgttgtggtgtgtggtgatggcgagtatatcatctatacggcaatggcc 87911932


  Database: Sscrofa_10.2.fasta
    Posted date:  Nov 16, 2011 10:34 AM
  Number of letters in database: 2,808,509,378
  Number of sequences in database:  4582
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 36,053,699
Number of extensions: 146
Number of successful extensions: 146
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 146
Number of HSP's successfully gapped: 10
Length of query: 1288
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1267
Effective length of database: 2,808,413,156
Effective search space: 3558259468652
Effective search space used: 3558259468652
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)