Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-003661
(1224 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_002695173.1| PREDICTED: napsin A aspartic peptidase [Bos ... 687 0.0
Alignment gi|XP_001790669.2| PREDICTED: napsin A [Bos taurus]. 687 0.0
Alignment gi|NP_001159993.1| cathepsin D [Bos taurus]. 367 e-102
Alignment gi|NP_001193438.1| renin [Bos taurus]. 319 3e-87
Alignment gi|NP_001001600.2| pepsin A preproprotein [Bos taurus]. 272 5e-73
Alignment gi|NP_001192720.1| gastricsin [Bos taurus]. 259 3e-69
Alignment gi|NP_851337.1| chymosin preproprotein [Bos taurus]. 244 1e-64
Alignment gi|NP_788799.1| pregnancy-associated glycoprotein 18 [Bos tauru... 244 1e-64
Alignment gi|NP_788798.1| pregnancy-associated glycoprotein 16 [Bos tauru... 240 2e-63
Alignment gi|NP_788797.1| pregnancy-associated glycoprotein 15 [Bos tauru... 239 5e-63
>ref|XP_002695173.1| PREDICTED: napsin A aspartic peptidase [Bos taurus].
Length = 408
Score = 687 bits (1773), Expect = 0.0
Identities = 330/388 (85%), Positives = 357/388 (92%), Gaps = 1/388 (0%)
Frame = +3
Query: 60 TSEPAGAMLIRIPLRRVHAGLRTLNPLRAWEKSAEPPRLGAPSPGDKT-FVPLSNYLNVQ 236
T EPA A LIRIPLRRV+ G + LNPLR WEK AEPPRLGAP+PG+K+ FVPLS+Y+NVQ
Sbjct: 18 TLEPARASLIRIPLRRVNIGFKALNPLRGWEKLAEPPRLGAPAPGNKSLFVPLSDYMNVQ 77
Query: 237 YYGEIGLGTPPQNFSVIFDTGSSNLWVPSGRCHFLSLPCWLHHRYHSKASSSFHSNETKF 416
YYGEIGLGTPPQNFSV+FDTGSSNLWVPS RCHF SLPCWLHHR++ KASSSF SN TKF
Sbjct: 78 YYGEIGLGTPPQNFSVVFDTGSSNLWVPSVRCHFFSLPCWLHHRFNPKASSSFRSNGTKF 137
Query: 417 AIQYGTGRLNGILSEDKLTIGGLTGASVIFGEALWEPSLVFAFAHFDGILGLGFPVLAVG 596
AIQYGTGRL GILSEDKLTIGG+TGA+V FGEALWEPSLVF FAHFDGILGLGFPVLAVG
Sbjct: 138 AIQYGTGRLAGILSEDKLTIGGITGATVTFGEALWEPSLVFTFAHFDGILGLGFPVLAVG 197
Query: 597 GVRPPLDSLVDQGLLDKPVFSFYLNRDPEAADGGELVLGGSDPAHYIPPLTFVPVTVPAY 776
GVRPPLD LVDQGLLDKPVFSFYLNR+PEAADGGELVLGGSDPAHYIPPLTFVPVT+PA+
Sbjct: 198 GVRPPLDRLVDQGLLDKPVFSFYLNRNPEAADGGELVLGGSDPAHYIPPLTFVPVTIPAF 257
Query: 777 WQVHVERVHVGTGLTLCAQGCAAILDTGTSLITGPTEEIQALQAAIGGIPLLMGEYLIQC 956
WQ+H+ERV VGTGLTLCA+GCAAILDTGTSLITGPTEEI+ALQ AIG +PLLMG+Y I+C
Sbjct: 258 WQIHMERVQVGTGLTLCARGCAAILDTGTSLITGPTEEIRALQKAIGAVPLLMGKYYIEC 317
Query: 957 SKIPTLPPVSFHLGGVWFNLTAXDYVIQITRGGASLCLSGFQALDMPPPTGPLWILGDVF 1136
SKIPTLPPVSF LGGVWFNLTA DYVIQITR G S+CLSGF ALD+PPP+GP WILGDVF
Sbjct: 318 SKIPTLPPVSFLLGGVWFNLTAQDYVIQITRSGFSVCLSGFMALDVPPPSGPFWILGDVF 377
Query: 1137 LGSYVAVFDRGDRKNDARVGLARARAHG 1220
LGSYVAVFDRGDRK+ A+VGLARAR G
Sbjct: 378 LGSYVAVFDRGDRKSGAQVGLARARPRG 405
>ref|XP_001790669.2| PREDICTED: napsin A [Bos taurus].
Length = 408
Score = 687 bits (1773), Expect = 0.0
Identities = 330/388 (85%), Positives = 357/388 (92%), Gaps = 1/388 (0%)
Frame = +3
Query: 60 TSEPAGAMLIRIPLRRVHAGLRTLNPLRAWEKSAEPPRLGAPSPGDKT-FVPLSNYLNVQ 236
T EPA A LIRIPLRRV+ G + LNPLR WEK AEPPRLGAP+PG+K+ FVPLS+Y+NVQ
Sbjct: 18 TLEPARASLIRIPLRRVNIGFKALNPLRGWEKLAEPPRLGAPAPGNKSLFVPLSDYMNVQ 77
Query: 237 YYGEIGLGTPPQNFSVIFDTGSSNLWVPSGRCHFLSLPCWLHHRYHSKASSSFHSNETKF 416
YYGEIGLGTPPQNFSV+FDTGSSNLWVPS RCHF SLPCWLHHR++ KASSSF SN TKF
Sbjct: 78 YYGEIGLGTPPQNFSVVFDTGSSNLWVPSVRCHFFSLPCWLHHRFNPKASSSFRSNGTKF 137
Query: 417 AIQYGTGRLNGILSEDKLTIGGLTGASVIFGEALWEPSLVFAFAHFDGILGLGFPVLAVG 596
AIQYGTGRL GILSEDKLTIGG+TGA+V FGEALWEPSLVF FAHFDGILGLGFPVLAVG
Sbjct: 138 AIQYGTGRLAGILSEDKLTIGGITGATVTFGEALWEPSLVFTFAHFDGILGLGFPVLAVG 197
Query: 597 GVRPPLDSLVDQGLLDKPVFSFYLNRDPEAADGGELVLGGSDPAHYIPPLTFVPVTVPAY 776
GVRPPLD LVDQGLLDKPVFSFYLNR+PEAADGGELVLGGSDPAHYIPPLTFVPVT+PA+
Sbjct: 198 GVRPPLDRLVDQGLLDKPVFSFYLNRNPEAADGGELVLGGSDPAHYIPPLTFVPVTIPAF 257
Query: 777 WQVHVERVHVGTGLTLCAQGCAAILDTGTSLITGPTEEIQALQAAIGGIPLLMGEYLIQC 956
WQ+H+ERV VGTGLTLCA+GCAAILDTGTSLITGPTEEI+ALQ AIG +PLLMG+Y I+C
Sbjct: 258 WQIHMERVQVGTGLTLCARGCAAILDTGTSLITGPTEEIRALQKAIGAVPLLMGKYYIEC 317
Query: 957 SKIPTLPPVSFHLGGVWFNLTAXDYVIQITRGGASLCLSGFQALDMPPPTGPLWILGDVF 1136
SKIPTLPPVSF LGGVWFNLTA DYVIQITR G S+CLSGF ALD+PPP+GP WILGDVF
Sbjct: 318 SKIPTLPPVSFLLGGVWFNLTAQDYVIQITRSGFSVCLSGFMALDVPPPSGPFWILGDVF 377
Query: 1137 LGSYVAVFDRGDRKNDARVGLARARAHG 1220
LGSYVAVFDRGDRK+ A+VGLARAR G
Sbjct: 378 LGSYVAVFDRGDRKSGAQVGLARARPRG 405
>ref|NP_001159993.1| cathepsin D [Bos taurus].
Length = 410
Score = 367 bits (943), Expect = e-102
Identities = 190/399 (47%), Positives = 260/399 (65%), Gaps = 22/399 (5%)
Frame = +3
Query: 78 AMLIRIPLRRVHAGLRTLN-------------PLRAWEKSAEPPRLGAPSPGDKTFVPLS 218
A +IRIPL + + RT++ P+ + + EP P P L
Sbjct: 21 AAVIRIPLHKFTSIRRTMSEAMGPVEHLIAKGPISKYA-TGEPAVRQGPIPE-----LLK 74
Query: 219 NYLNVQYYGEIGLGTPPQNFSVIFDTGSSNLWVPSGRCHFLSLPCWLHHRYHSKASSSFH 398
NY++ YYGEIG+GTPPQ F+V+FDTGS+NLWVPS C L + CW H +Y+S SS++
Sbjct: 75 NYMD--YYGEIGIGTPPQCFTVVFDTGSANLWVPSIHCKLLDIACWTHRKYNSDKSSTYV 132
Query: 399 SNETKFAIQYGTGRLNGILSEDKLTI---------GGLTGASVIFGEALWEPSLVFAFAH 551
N T F I YG+G L+G LS+D +++ GG+T FGEA+ +P +VF A
Sbjct: 133 KNGTTFDIHYGSGSLSGYLSQDTVSVPCNPSSSSPGGVTVQRQTFGEAIKQPGVVFIAAK 192
Query: 552 FDGILGLGFPVLAVGGVRPPLDSLVDQGLLDKPVFSFYLNRDPEAADGGELVLGGSDPAH 731
FDGILG+ +P ++V V P D+L+ Q L+DK VFSF+LNRDP+A GGEL+LGG+D +
Sbjct: 193 FDGILGMAYPRISVNNVLPVFDNLMQQKLVDKNVFSFFLNRDPKAQPGGELMLGGTDSKY 252
Query: 732 YIPPLTFVPVTVPAYWQVHVERVHVGTGLTLCAQGCAAILDTGTSLITGPTEEIQALQAA 911
Y L F VT AYWQ+H++++ VG+ LT+C GC AI+DTGTSLI GP EE++ LQ A
Sbjct: 253 YRGSLMFHNVTRQAYWQIHMDQLDVGSSLTVCKGGCEAIVDTGTSLIVGPVEEVRELQKA 312
Query: 912 IGGIPLLMGEYLIQCSKIPTLPPVSFHLGGVWFNLTAXDYVIQITRGGASLCLSGFQALD 1091
IG +PL+ GEY+I C K+ +LP V+ LGG + L+ DY +++++ G ++CLSGF +D
Sbjct: 313 IGAVPLIQGEYMIPCEKVSSLPQVTVKLGGKDYALSPEDYALKVSQAGTTVCLSGFMGMD 372
Query: 1092 MPPPTGPLWILGDVFLGSYVAVFDRGDRKNDARVGLARA 1208
+PPP GPLWILGDVF+G Y VFDR + RVGLA A
Sbjct: 373 IPPPGGPLWILGDVFIGRYYTVFDR----DQNRVGLAEA 407
>ref|NP_001193438.1| renin [Bos taurus].
Length = 398
Score = 319 bits (818), Expect = 3e-87
Identities = 166/363 (45%), Positives = 227/363 (62%), Gaps = 9/363 (2%)
Frame = +3
Query: 150 EKSAEPPRLGAP--------SPGDKTF-VPLSNYLNVQYYGEIGLGTPPQNFSVIFDTGS 302
E+ + RLGA S G++T V L+NYL+ QYYGEIG+GTPPQ F V+FDTGS
Sbjct: 42 ERGVDMARLGAEWSQLTKTLSFGNRTSPVVLTNYLDTQYYGEIGIGTPPQTFKVVFDTGS 101
Query: 303 SNLWVPSGRCHFLSLPCWLHHRYHSKASSSFHSNETKFAIQYGTGRLNGILSEDKLTIGG 482
+NLWVPS +C L C +H Y S SSS+ N T+F I YG+G++ G LS+D +T+GG
Sbjct: 102 ANLWVPSTKCSPLYTACEIHSLYDSLESSSYVENGTEFTIHYGSGKVKGFLSQDLVTVGG 161
Query: 483 LTGASVIFGEALWEPSLVFAFAHFDGILGLGFPVLAVGGVRPPLDSLVDQGLLDKPVFSF 662
+T + FGE P L F A FDG+LG+GFP AVGGV P D ++ Q +L VFS
Sbjct: 162 IT-VTQTFGEVTELPLLPFMLAKFDGVLGMGFPAQAVGGVTPVFDHILAQRVLTDDVFSV 220
Query: 663 YLNRDPEAADGGELVLGGSDPAHYIPPLTFVPVTVPAYWQVHVERVHVGTGLTLCAQGCA 842
Y +R+ GGE+VLGGSDP +Y +V ++ P WQ+ ++ V V + LC +GC
Sbjct: 221 YYSRNSHLL-GGEIVLGGSDPQYYQENFHYVSISKPGSWQIRMKGVSVRSTTLLCEEGCM 279
Query: 843 AILDTGTSLITGPTEEIQALQAAIGGIPLLMGEYLIQCSKIPTLPPVSFHLGGVWFNLTA 1022
I+DTG S I+GPT ++ L A+G L + +Y++ C+++PTLP +SFHLGG + LT+
Sbjct: 280 VIVDTGASYISGPTSSLRLLMEALGAKELSIDKYVVNCNQMPTLPDISFHLGGKAYTLTS 339
Query: 1023 XDYVIQITRGGASLCLSGFQALDMPPPTGPLWILGDVFLGSYVAVFDRGDRKNDARVGLA 1202
DYV+Q LC +D+PPPTGP+W+LG F+ + FDR R N R+G A
Sbjct: 340 ADYVLQDPYNNDDLCTLALHGMDIPPPTGPVWVLGATFIRKFYTEFDR--RNN--RIGFA 395
Query: 1203 RAR 1211
AR
Sbjct: 396 LAR 398
>ref|NP_001001600.2| pepsin A preproprotein [Bos taurus].
Length = 386
Score = 272 bits (695), Expect = 5e-73
Identities = 139/331 (41%), Positives = 204/331 (61%)
Frame = +3
Query: 210 PLSNYLNVQYYGEIGLGTPPQNFSVIFDTGSSNLWVPSGRCHFLSLPCWLHHRYHSKASS 389
PL NYL+ +Y+G IG+GTP Q+F+VIFDTGSSNLWVPS C S C H+R++ + SS
Sbjct: 65 PLQNYLDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSIYCS--SEACTNHNRFNPQDSS 122
Query: 390 SFHSNETKFAIQYGTGRLNGILSEDKLTIGGLTGASVIFGEALWEPSLVFAFAHFDGILG 569
++ + +I YGTG + GIL D + +GG++ + IFG + EP +A FDGILG
Sbjct: 123 TYEATSETLSITYGTGSMTGILGYDTVQVGGISDTNQIFGLSETEPGSFLYYAPFDGILG 182
Query: 570 LGFPVLAVGGVRPPLDSLVDQGLLDKPVFSFYLNRDPEAADGGELVLGGSDPAHYIPPLT 749
L +P ++ G P D++ DQGL+ + +FS YL+ + E+ G ++ G D ++Y L
Sbjct: 183 LAYPSISSSGATPVFDNIWDQGLVSQDLFSVYLSSNEES--GSVVIFGDIDSSYYSGSLN 240
Query: 750 FVPVTVPAYWQVHVERVHVGTGLTLCAQGCAAILDTGTSLITGPTEEIQALQAAIGGIPL 929
+VPV+V YWQ+ V+ + + C+ GC AI+DTGTSL+ GPT I +Q+ IG
Sbjct: 241 WVPVSVEGYWQITVDSITMNGESIACSDGCQAIVDTGTSLLAGPTTAISNIQSYIGASED 300
Query: 930 LMGEYLIQCSKIPTLPPVSFHLGGVWFNLTAXDYVIQITRGGASLCLSGFQALDMPPPTG 1109
GE +I CS I +LP + F + GV + + Y++Q +C SGF+ +D+ +G
Sbjct: 301 SSGEVVISCSSIDSLPDIVFTINGVQYPVPPSAYILQ----SNGICSSGFEGMDISTSSG 356
Query: 1110 PLWILGDVFLGSYVAVFDRGDRKNDARVGLA 1202
LWILGDVF+ Y VFDRG+ ++GLA
Sbjct: 357 DLWILGDVFIRQYFTVFDRGNN----QIGLA 383
>ref|NP_001192720.1| gastricsin [Bos taurus].
Length = 391
Score = 259 bits (663), Expect = 3e-69
Identities = 140/332 (42%), Positives = 194/332 (58%), Gaps = 2/332 (0%)
Frame = +3
Query: 219 NYLNVQYYGEIGLGTPPQNFSVIFDTGSSNLWVPSGRCHFLSLPCWLHHRYHSKASSSFH 398
+Y++ Y+GEI +GTPPQNF V+FDTGSSNLWVPS C S C H R++ SS++
Sbjct: 68 DYMDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQ--SQACTSHTRFNHSLSSTYS 125
Query: 399 SNETKFAIQYGTGRLNGILSEDKLTIGGLTGASVIFGEALWEPSLVFAFAHFDGILGLGF 578
+NE F++QYG+G L GIL D LT+ G+ + FG + EP F +A FDGI+G+ +
Sbjct: 126 TNEQTFSLQYGSGSLTGILGYDTLTVQGIKVPNQEFGLSKTEPGTNFLYAKFDGIMGMAY 185
Query: 579 PVLAVGGVRPPLDSLVDQGLLDKPVFSFYLNRDPEAADGGELVLGGSDPAHYIPPLTFVP 758
P L+V G L ++ +G L PVFSFYL+ + DGG ++ GG D Y + + P
Sbjct: 186 PSLSVDGATTVLQGMLQEGALTSPVFSFYLSSQQGSQDGGAVIFGGVDNCLYTGQIYWAP 245
Query: 759 VTVPAYWQVHVERVHVGTGLT-LCAQGCAAILDTGTSLITGPTEEIQALQAAIGGIPLLM 935
VT YWQ+ E +G T C+ GC AI+DTGTSL+T P + + AL A G
Sbjct: 246 VTQELYWQIGFEEFLIGDQATGWCSTGCQAIVDTGTSLLTVPQQFLSALLQATGAQEDQY 305
Query: 936 GEYLIQCSKIPTLPPVSFHLGGVWFNLTAXDYVIQITRGGASLCLSGFQALDMPPPTG-P 1112
G++ + C+ I LP ++ + GV F L Y++ S C+ G + +P G P
Sbjct: 306 GQFPVDCNNIQNLPTLTLVINGVQFPLPPASYIL---NNDDSYCILGVEVTYVPSQNGQP 362
Query: 1113 LWILGDVFLGSYVAVFDRGDRKNDARVGLARA 1208
LWILGDVFL SY +V+D G+ RVG A A
Sbjct: 363 LWILGDVFLRSYYSVYDLGNN----RVGFATA 390
>ref|NP_851337.1| chymosin preproprotein [Bos taurus].
Length = 381
Score = 244 bits (623), Expect = 1e-64
Identities = 147/382 (38%), Positives = 209/382 (54%), Gaps = 4/382 (1%)
Frame = +3
Query: 75 GAMLIRIPLRRVHAGLRTLNPLRAWEKSAEPPRLGAPSP----GDKTFVPLSNYLNVQYY 242
GA + RIPL + + + L E + + G S G+ VPL+NYL+ QY+
Sbjct: 16 GAEITRIPLYKGKSLRKALKEHGLLEDFLQKQQYGISSKYSGFGEVASVPLTNYLDSQYF 75
Query: 243 GEIGLGTPPQNFSVIFDTGSSNLWVPSGRCHFLSLPCWLHHRYHSKASSSFHSNETKFAI 422
G+I LGTPPQ F+V+FDTGSS+ WVPS C S C H R+ + SS+F + +I
Sbjct: 76 GKIYLGTPPQEFTVLFDTGSSDFWVPSIYCK--SNACKNHQRFDPRKSSTFQNLGKPLSI 133
Query: 423 QYGTGRLNGILSEDKLTIGGLTGASVIFGEALWEPSLVFAFAHFDGILGLGFPVLAVGGV 602
YGTG + GIL D +T+ + G + EP VF +A FDGILG+ +P LA
Sbjct: 134 HYGTGSMQGILGYDTVTVSNIVDIQQTVGLSTQEPGDVFTYAEFDGILGMAYPSLASEYS 193
Query: 603 RPPLDSLVDQGLLDKPVFSFYLNRDPEAADGGELVLGGSDPAHYIPPLTFVPVTVPAYWQ 782
P D+++++ L+ + +FS Y++R+ + + L LG +P++Y L +VPVTV YWQ
Sbjct: 194 IPVFDNMMNRHLVAQDLFSVYMDRNGQES---MLTLGAINPSYYTGSLHWVPVTVQQYWQ 250
Query: 783 VHVERVHVGTGLTLCAQGCAAILDTGTSLITGPTEEIQALQAAIGGIPLLMGEYLIQCSK 962
V+ V + + C GC AILDTGTS + GP+ +I +Q AIG GE+ I C
Sbjct: 251 FTVDSVTISGVVVACEGGCQAILDTGTSKLVGPSSDILNIQQAIGATQNQYGEFDIDCDN 310
Query: 963 IPTLPPVSFHLGGVWFNLTAXDYVIQITRGGASLCLSGFQALDMPPPTGPLWILGDVFLG 1142
+ +P V F + G + LT Y Q C SGFQ+ + WILGDVF+
Sbjct: 311 LSYMPTVVFEINGKMYPLTPSAYTSQ----DQGFCTSGFQSEN----HSQKWILGDVFIR 362
Query: 1143 SYVAVFDRGDRKNDARVGLARA 1208
Y +VFDR + VGLA+A
Sbjct: 363 EYYSVFDRANN----LVGLAKA 380
>ref|NP_788799.1| pregnancy-associated glycoprotein 18 [Bos taurus].
Length = 381
Score = 244 bits (623), Expect = 1e-64
Identities = 148/379 (39%), Positives = 214/379 (56%), Gaps = 4/379 (1%)
Frame = +3
Query: 84 LIRIPLRRVHAGLRTL---NPLRAWEKSAEPPRLGAPSPGDK-TFVPLSNYLNVQYYGEI 251
+++IPLRRV +TL N L + K S G TF PL N + Y G I
Sbjct: 16 IVKIPLRRVKTMRKTLSGKNILNNFLKEHAYRLSQISSCGSNLTFHPLRNIKDRLYVGNI 75
Query: 252 GLGTPPQNFSVIFDTGSSNLWVPSGRCHFLSLPCWLHHRYHSKASSSFHSNETKFAIQYG 431
+GTPPQ F VIFDTGSS+LWV S C S C H + SS+F + F+I YG
Sbjct: 76 TIGTPPQEFQVIFDTGSSDLWVTSVFC--TSPTCSTHVMFRHFDSSTFRPTKKTFSINYG 133
Query: 432 TGRLNGILSEDKLTIGGLTGASVIFGEALWEPSLVFAFAHFDGILGLGFPVLAVGGVRPP 611
+GR+ G++ D + IG L FG ++ E L F FDG++GL +P L+ G P
Sbjct: 134 SGRMKGVVVHDTVRIGDLVSTDQPFGLSVVE--LGFDGIPFDGVMGLNYPKLSFSGAIPI 191
Query: 612 LDSLVDQGLLDKPVFSFYLNRDPEAADGGELVLGGSDPAHYIPPLTFVPVTVPAYWQVHV 791
D+L +QG + +PVF+FYL++D + +G ++ GG D +Y L ++P+ W VH+
Sbjct: 192 FDNLRNQGAISEPVFAFYLSKDEQ--EGSVVMFGGVDHRYYKGELNWIPLIQAGDWSVHM 249
Query: 792 ERVHVGTGLTLCAQGCAAILDTGTSLITGPTEEIQALQAAIGGIPLLMGEYLIQCSKIPT 971
+ + + + C+ GC A++DTGTSLI GP + +Q I +P EY + CS + T
Sbjct: 250 DSISMKRKVIACSGGCKAVVDTGTSLIEGPRRLVNNIQKLIRAMP-RGSEYYVSCSAVNT 308
Query: 972 LPPVSFHLGGVWFNLTAXDYVIQITRGGASLCLSGFQALDMPPPTGPLWILGDVFLGSYV 1151
LPP+ F + G+ + + A Y+++ +RG C + F+ + PP+ WILGDVFL Y
Sbjct: 309 LPPIIFTIKGINYPVPAQAYILKDSRGH---CYTTFKEDRLSPPSTETWILGDVFLRRYF 365
Query: 1152 AVFDRGDRKNDARVGLARA 1208
+VFDRG ND R+GLARA
Sbjct: 366 SVFDRG---ND-RIGLARA 380
>ref|NP_788798.1| pregnancy-associated glycoprotein 16 [Bos taurus].
Length = 380
Score = 240 bits (613), Expect = 2e-63
Identities = 151/380 (39%), Positives = 212/380 (55%), Gaps = 5/380 (1%)
Frame = +3
Query: 84 LIRIPLRRVHAGLRTL---NPLRAWEKSAEPPRLGAPS--PGDKTFVPLSNYLNVQYYGE 248
+++IPLRRV +TL N L + K P RL S + T +PL N ++ Y G
Sbjct: 16 IVKIPLRRVKTMRKTLSGKNTLNNFLKE-HPYRLSHISFRGSNLTTLPLRNIRDMLYVGN 74
Query: 249 IGLGTPPQNFSVIFDTGSSNLWVPSGRCHFLSLPCWLHHRYHSKASSSFHSNETKFAIQY 428
I +GTPPQ F V+FDTGSS+LWVPS C S C H R+ SS+F F I Y
Sbjct: 75 ITIGTPPQEFQVVFDTGSSDLWVPSDFC--TSPACSTHVRFRHFQSSTFRPTTKTFRIIY 132
Query: 429 GTGRLNGILSEDKLTIGGLTGASVIFGEALWEPSLVFAFAHFDGILGLGFPVLAVGGVRP 608
G+GR+ G+++ D + IG L FG ++ E L FDGILGL +P L+ G P
Sbjct: 133 GSGRMKGVVAHDTVRIGNLVSTDQPFGLSMAEYGL--ESRRFDGILGLNYPNLSCSGAIP 190
Query: 609 PLDSLVDQGLLDKPVFSFYLNRDPEAADGGELVLGGSDPAHYIPPLTFVPVTVPAYWQVH 788
D L +QG + P+F+FYL++D +G ++ GG D +Y L +VP+ W VH
Sbjct: 191 IFDKLKNQGAISDPIFAFYLSKDKR--EGSVVMFGGVDHRYYKGELNWVPLIRAGDWIVH 248
Query: 789 VERVHVGTGLTLCAQGCAAILDTGTSLITGPTEEIQALQAAIGGIPLLMGEYLIQCSKIP 968
V+R+ + + C+ GCAA++DTGTSLI GP I + IG P Y + CS +
Sbjct: 249 VDRITMKREVIACSDGCAALVDTGTSLIQGPGRVIDNIHKLIGATPRGSKHY-VSCSVVN 307
Query: 969 TLPPVSFHLGGVWFNLTAXDYVIQITRGGASLCLSGFQALDMPPPTGPLWILGDVFLGSY 1148
TLP + F + G+ + + A Y+++ +RG C + F+ + T W+LGDVFL Y
Sbjct: 308 TLPSIIFTINGINYPVPAPAYILKDSRG---YCYTAFKEQRVRRST-ESWLLGDVFLRLY 363
Query: 1149 VAVFDRGDRKNDARVGLARA 1208
+VFDRG ND R+GLARA
Sbjct: 364 FSVFDRG---ND-RIGLARA 379
>ref|NP_788797.1| pregnancy-associated glycoprotein 15 [Bos taurus].
Length = 380
Score = 239 bits (609), Expect = 5e-63
Identities = 147/380 (38%), Positives = 214/380 (56%), Gaps = 5/380 (1%)
Frame = +3
Query: 84 LIRIPLRRVHAGLRTL---NPLRAWEKSAEPPRLGAPS--PGDKTFVPLSNYLNVQYYGE 248
+++IPLRRV +TL N L + K RL S + T PL N ++ Y G
Sbjct: 16 VVKIPLRRVKTMTKTLSGKNMLNNFLKE-HAYRLSQISFHGSNLTIHPLRNIRDLFYMGN 74
Query: 249 IGLGTPPQNFSVIFDTGSSNLWVPSGRCHFLSLPCWLHHRYHSKASSSFHSNETKFAIQY 428
I +GTPPQ F V+FDTGSS+LWVPS C S C H R+ SS+F F+I+Y
Sbjct: 75 ITIGTPPQEFLVVFDTGSSDLWVPSDFC--TSPACSKHFRFRHLQSSTFRLTNKTFSIEY 132
Query: 429 GTGRLNGILSEDKLTIGGLTGASVIFGEALWEPSLVFAFAHFDGILGLGFPVLAVGGVRP 608
G+G + GI++ D + IG L FG ++ E F FDG+LGL +P ++ G P
Sbjct: 133 GSGTMEGIVAHDTVRIGDLVSTDQPFGLSMTESG--FEGIPFDGVLGLNYPNISFSGAIP 190
Query: 609 PLDSLVDQGLLDKPVFSFYLNRDPEAADGGELVLGGSDPAHYIPPLTFVPVTVPAYWQVH 788
D L +QG + +PVF+FYL++D + +G ++ GG D +Y L +VP+ W VH
Sbjct: 191 IFDKLKNQGAISEPVFAFYLSKDEQ--EGSVVMFGGVDHRYYKGELKWVPLIEAGDWIVH 248
Query: 789 VERVHVGTGLTLCAQGCAAILDTGTSLITGPTEEIQALQAAIGGIPLLMGEYLIQCSKIP 968
++ + + + C+ GC A++DTG S+I GP + +Q IG L ++ + CS +
Sbjct: 249 MDCISMRRKVIACSGGCEAVVDTGVSMIKGPKTLVDNIQKLIGA-TLRGFKHYVSCSAVD 307
Query: 969 TLPPVSFHLGGVWFNLTAXDYVIQITRGGASLCLSGFQALDMPPPTGPLWILGDVFLGSY 1148
TLP ++F + G+ + + A Y+++ +RG C S FQ + P T WILGDVFL Y
Sbjct: 308 TLPSITFTINGINYRVPARAYILKDSRG---CCYSSFQETTVSPST-ETWILGDVFLRLY 363
Query: 1149 VAVFDRGDRKNDARVGLARA 1208
+VFDRG ND R+GLARA
Sbjct: 364 FSVFDRG---ND-RIGLARA 379
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 55,301,056
Number of extensions: 1865127
Number of successful extensions: 9353
Number of sequences better than 1.0e-05: 69
Number of HSP's gapped: 8999
Number of HSP's successfully gapped: 79
Length of query: 408
Length of database: 17,681,374
Length adjustment: 105
Effective length of query: 303
Effective length of database: 14,207,134
Effective search space: 4304761602
Effective search space used: 4304761602
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-003661
(1224 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_533610.2| PREDICTED: similar to napsin A preproprotein [C... 664 0.0
Alignment gi|NP_001020792.1| cathepsin D precursor [Canis lupus familiari... 394 e-109
Alignment gi|XP_545694.2| PREDICTED: similar to cathepsin E isoform a pre... 330 2e-90
Alignment gi|NP_001003194.1| renin precursor [Canis lupus familiaris]. 320 1e-87
Alignment gi|NP_001003117.1| pepsin A preproprotein [Canis lupus familiar... 276 2e-74
Alignment gi|XP_854465.1| PREDICTED: similar to Gastricsin precursor (Pep... 249 3e-66
Alignment gi|XP_547233.1| PREDICTED: similar to prochymosin [Canis famili... 245 5e-65
Alignment gi|NP_001003028.1| pepsin B precursor [Canis lupus familiaris]. 243 3e-64
Alignment gi|XP_540923.2| PREDICTED: similar to pepsinogen 5, group I (pe... 230 2e-60
Alignment gi|XP_852244.1| PREDICTED: similar to Gastricsin precursor (Pep... 107 2e-23
>ref|XP_533610.2| PREDICTED: similar to napsin A preproprotein [Canis familiaris].
Length = 422
Score = 664 bits (1712), Expect = 0.0
Identities = 323/382 (84%), Positives = 340/382 (89%), Gaps = 1/382 (0%)
Frame = +3
Query: 66 EPAGAMLIRIPLRRVHAGLRTLNPLRAWEKSAEPPRLGAPSPGDK-TFVPLSNYLNVQYY 242
EPA A LIRIPLRRV+ GL TLN LR W K PP LG PS GD FVPLSNY+NVQYY
Sbjct: 18 EPARASLIRIPLRRVYPGLETLNSLRGWGKPTVPPSLGVPSSGDNPVFVPLSNYMNVQYY 77
Query: 243 GEIGLGTPPQNFSVIFDTGSSNLWVPSGRCHFLSLPCWLHHRYHSKASSSFHSNETKFAI 422
GEIGLGTPPQNFSVIFDTGSSNLWVPS RCHF SLPCW HHRY+SKASSSF N TKFAI
Sbjct: 78 GEIGLGTPPQNFSVIFDTGSSNLWVPSIRCHFFSLPCWFHHRYNSKASSSFQPNGTKFAI 137
Query: 423 QYGTGRLNGILSEDKLTIGGLTGASVIFGEALWEPSLVFAFAHFDGILGLGFPVLAVGGV 602
QYGTGRL+GILSEDKLTIGG+ ASVIFGEALWEPSLVF AHFDGILGLGFP+LAVGGV
Sbjct: 138 QYGTGRLDGILSEDKLTIGGVKSASVIFGEALWEPSLVFTLAHFDGILGLGFPILAVGGV 197
Query: 603 RPPLDSLVDQGLLDKPVFSFYLNRDPEAADGGELVLGGSDPAHYIPPLTFVPVTVPAYWQ 782
+PPLD LVDQGLLDKPVFSFYLNRDPEA DGGELVLGGSDPAHYIPPLTF+PVTVPAYWQ
Sbjct: 198 QPPLDLLVDQGLLDKPVFSFYLNRDPEAVDGGELVLGGSDPAHYIPPLTFLPVTVPAYWQ 257
Query: 783 VHVERVHVGTGLTLCAQGCAAILDTGTSLITGPTEEIQALQAAIGGIPLLMGEYLIQCSK 962
+H+ERV VGTGL LCAQGCAAILDTGTSLITGPTEEIQAL AAIGG LL+GEYLIQCS+
Sbjct: 258 IHMERVKVGTGLILCAQGCAAILDTGTSLITGPTEEIQALNAAIGGFSLLLGEYLIQCSE 317
Query: 963 IPTLPPVSFHLGGVWFNLTAXDYVIQITRGGASLCLSGFQALDMPPPTGPLWILGDVFLG 1142
IPTLPP+SF LGGVWFNLTA DYVIQI RGG LCLSGFQALD+PPPTGPLWILGDVFLG
Sbjct: 318 IPTLPPISFLLGGVWFNLTAQDYVIQIARGGVRLCLSGFQALDIPPPTGPLWILGDVFLG 377
Query: 1143 SYVAVFDRGDRKNDARVGLARA 1208
++VAVFDRG+ ARVGLARA
Sbjct: 378 AHVAVFDRGNLTGGARVGLARA 399
>ref|NP_001020792.1| cathepsin D precursor [Canis lupus familiaris].
Length = 410
Score = 394 bits (1011), Expect = e-109
Identities = 199/399 (49%), Positives = 265/399 (66%), Gaps = 22/399 (5%)
Frame = +3
Query: 78 AMLIRIPLRRVHAGLRTLN-------------PLRAWEKSAEPPRLGAPSPGDKTFVPLS 218
A L+RIPL + + RT+ P+ + + A P G P P L
Sbjct: 19 AALVRIPLHKFTSVRRTMTELGGPVEDLIAKGPISKYAQGA-PAVTGGPIPE-----MLR 72
Query: 219 NYLNVQYYGEIGLGTPPQNFSVIFDTGSSNLWVPSGRCHFLSLPCWLHHRYHSKASSSFH 398
NY++ QYYGEIG+GTPPQ F+V+FDTGSSNLWVPS C L + CW+HH+Y+S SS++
Sbjct: 73 NYMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACWIHHKYNSGKSSTYV 132
Query: 399 SNETKFAIQYGTGRLNGILSED------KLTIGGLTGASV---IFGEALWEPSLVFAFAH 551
N T F I YG+G L+G LS+D K + GL G V FGEA +P + F A
Sbjct: 133 KNGTSFDIHYGSGSLSGYLSQDTVSVPCKSALSGLAGIKVERQTFGEATKQPGITFIAAK 192
Query: 552 FDGILGLGFPVLAVGGVRPPLDSLVDQGLLDKPVFSFYLNRDPEAADGGELVLGGSDPAH 731
FDGILG+ +P ++V V P D+L+ Q L++K +FSFYLNRDP A GGEL+LGG+D +
Sbjct: 193 FDGILGMAYPRISVNNVLPVFDNLMQQKLVEKNIFSFYLNRDPNAQPGGELMLGGTDSKY 252
Query: 732 YIPPLTFVPVTVPAYWQVHVERVHVGTGLTLCAQGCAAILDTGTSLITGPTEEIQALQAA 911
Y PL+++ VT AYWQVH+E+V VG+ LTLC GC AI+DTGTSLI GP +E++ LQ A
Sbjct: 253 YKGPLSYLNVTRKAYWQVHMEQVDVGSSLTLCKGGCEAIVDTGTSLIVGPVDEVRELQKA 312
Query: 912 IGGIPLLMGEYLIQCSKIPTLPPVSFHLGGVWFNLTAXDYVIQITRGGASLCLSGFQALD 1091
IG +PL+ GEY+I C K+ TLP V+ LGG + L++ DY +++++GG ++CLSGF +D
Sbjct: 313 IGAVPLIQGEYMIPCEKVSTLPDVTLKLGGKLYKLSSEDYTLKVSQGGKTICLSGFMGMD 372
Query: 1092 MPPPTGPLWILGDVFLGSYVAVFDRGDRKNDARVGLARA 1208
+PPP GPLWILGDVF+G Y VFDR + RVGLA+A
Sbjct: 373 IPPPGGPLWILGDVFIGCYYTVFDR----DQNRVGLAQA 407
>ref|XP_545694.2| PREDICTED: similar to cathepsin E isoform a preproprotein [Canis
familiaris].
Length = 428
Score = 330 bits (845), Expect = 2e-90
Identities = 173/381 (45%), Positives = 242/381 (63%), Gaps = 6/381 (1%)
Frame = +3
Query: 84 LIRIPLRR---VHAGLRTLNPLRAWEKSAEPPRLG---APSPGDKTFVPLSNYLNVQYYG 245
++R+PLRR + LR L + KS + + + T PL NYL+++Y+G
Sbjct: 53 VLRVPLRRHQSLRKKLRARGQLSEFWKSQNLDMIQFTESCTMNQDTNEPLINYLDMEYFG 112
Query: 246 EIGLGTPPQNFSVIFDTGSSNLWVPSGRCHFLSLPCWLHHRYHSKASSSFHSNETKFAIQ 425
I +G+PPQNF+VIFDTGSSNLWVPS C S C H +++ S+++ + +F+IQ
Sbjct: 113 TISIGSPPQNFTVIFDTGSSNLWVPSVYC--TSPACKTHAKFYPSQSNTYSALGNQFSIQ 170
Query: 426 YGTGRLNGILSEDKLTIGGLTGASVIFGEALWEPSLVFAFAHFDGILGLGFPVLAVGGVR 605
YGTG L+GI+ D++ + GL FGE++ EP F A FDGILGLG+P LAVGGV
Sbjct: 171 YGTGSLSGIIGADQVNVEGLVVVGQQFGESVTEPGQTFVNAEFDGILGLGYPSLAVGGVT 230
Query: 606 PPLDSLVDQGLLDKPVFSFYLNRDPEAADGGELVLGGSDPAHYIPPLTFVPVTVPAYWQV 785
P D+++ Q L+D P+FS Y++ DPE G EL+ GG D +H+ L +VPVT YWQ+
Sbjct: 231 PVFDNMMAQNLVDIPMFSVYMSSDPEGGTGSELIFGGYDHSHFSGNLNWVPVTKQGYWQI 290
Query: 786 HVERVHVGTGLTLCAQGCAAILDTGTSLITGPTEEIQALQAAIGGIPLLMGEYLIQCSKI 965
++ + VG + C++GC AI+DTGTSLITGP++EI+ LQ AIG P + GEY ++C+ +
Sbjct: 291 ALDAIQVGGTVMFCSEGCQAIVDTGTSLITGPSDEIKQLQNAIGAEP-MDGEYGVECANL 349
Query: 966 PTLPPVSFHLGGVWFNLTAXDYVIQITRGGASLCLSGFQALDMPPPTGPLWILGDVFLGS 1145
+P V+F + GV + L Y + G C SGFQ LD+ PP GPLWILGDVF+
Sbjct: 350 NVMPDVTFIINGVSYTLQPTAYTLLDYVDGMEFCSSGFQGLDIQPPAGPLWILGDVFIRK 409
Query: 1146 YVAVFDRGDRKNDARVGLARA 1208
+ +VFDRG+ RVGLA A
Sbjct: 410 FYSVFDRGNN----RVGLALA 426
>ref|NP_001003194.1| renin precursor [Canis lupus familiaris].
Length = 403
Score = 320 bits (821), Expect = 1e-87
Identities = 159/343 (46%), Positives = 219/343 (63%), Gaps = 1/343 (0%)
Frame = +3
Query: 186 SPGDKTF-VPLSNYLNVQYYGEIGLGTPPQNFSVIFDTGSSNLWVPSGRCHFLSLPCWLH 362
S G+ T V L+NYL+ QYYGEIG+GTPPQ F V+FDTGS+NLWVPS RC L C +H
Sbjct: 67 SSGNSTSPVVLTNYLDTQYYGEIGIGTPPQTFKVVFDTGSANLWVPSTRCSPLYTACEIH 126
Query: 363 HRYHSKASSSFHSNETKFAIQYGTGRLNGILSEDKLTIGGLTGASVIFGEALWEPSLVFA 542
Y S SSS+ N T F I+YG+G++ G LS+D +T+GG+T + FGE P + F
Sbjct: 127 CLYDSSESSSYMENGTTFTIRYGSGKVKGFLSQDMVTVGGIT-VTQTFGEVTELPLIPFM 185
Query: 543 FAHFDGILGLGFPVLAVGGVRPPLDSLVDQGLLDKPVFSFYLNRDPEAADGGELVLGGSD 722
A FDG+LG+GFP AVGGV P D ++ QG+L + VFS Y +R+ GGE+VLGGSD
Sbjct: 186 LAKFDGVLGMGFPAQAVGGVTPVFDHILSQGVLKEEVFSVYYSRNSHLL-GGEVVLGGSD 244
Query: 723 PAHYIPPLTFVPVTVPAYWQVHVERVHVGTGLTLCAQGCAAILDTGTSLITGPTEEIQAL 902
P +Y +V ++ WQ+ ++ V V + +C +GC ++DTG S I+GPT ++ L
Sbjct: 245 PQYYQGNFHYVSISKTGSWQIKMKGVSVRSATLVCEEGCMVVVDTGASYISGPTSSLRLL 304
Query: 903 QAAIGGIPLLMGEYLIQCSKIPTLPPVSFHLGGVWFNLTAXDYVIQITRGGASLCLSGFQ 1082
+G L EY++ C+++PTLP +SFHLGG + LT+ DYV+Q G LC
Sbjct: 305 MDTLGAQELSTNEYVVNCNQVPTLPDISFHLGGRAYTLTSKDYVLQDPYGNEDLCTLALH 364
Query: 1083 ALDMPPPTGPLWILGDVFLGSYVAVFDRGDRKNDARVGLARAR 1211
LD+PPPTGP+W+LG F+ + FDR ++ R+G A AR
Sbjct: 365 GLDVPPPTGPVWVLGASFIRKFYTEFDR----HNNRIGFALAR 403
>ref|NP_001003117.1| pepsin A preproprotein [Canis lupus familiaris].
Length = 386
Score = 276 bits (707), Expect = 2e-74
Identities = 144/350 (41%), Positives = 212/350 (60%), Gaps = 9/350 (2%)
Frame = +3
Query: 180 APSPGDKTFVP---------LSNYLNVQYYGEIGLGTPPQNFSVIFDTGSSNLWVPSGRC 332
+P+P K F L NY++++Y+G IG+GTPPQ F+VIFDTGSSNLWVPS C
Sbjct: 46 SPNPASKYFPQEPTVLATQSLKNYMDMEYFGTIGIGTPPQEFTVIFDTGSSNLWVPSVYC 105
Query: 333 HFLSLPCWLHHRYHSKASSSFHSNETKFAIQYGTGRLNGILSEDKLTIGGLTGASVIFGE 512
S C H+R++ + SS++ +I YGTG + GIL D + +GG+ + IFG
Sbjct: 106 S--SPACSNHNRFNPQESSTYQGTNRPVSIAYGTGSMTGILGYDTVQVGGIADTNQIFGL 163
Query: 513 ALWEPSLVFAFAHFDGILGLGFPVLAVGGVRPPLDSLVDQGLLDKPVFSFYLNRDPEAAD 692
+ EP +A FDGILGL +P ++ G P D++ ++GL+ + +FS YL+ D ++
Sbjct: 164 SETEPGSFLYYAPFDGILGLAYPQISASGATPVFDNMWNEGLVSQDLFSVYLSSDDQS-- 221
Query: 693 GGELVLGGSDPAHYIPPLTFVPVTVPAYWQVHVERVHVGTGLTLCAQGCAAILDTGTSLI 872
G ++ GG D ++Y L +VPV+V YWQ+ V+ V + C+ GC AI+DTGTSL+
Sbjct: 222 GSVVMFGGIDSSYYSGNLNWVPVSVEGYWQITVDSVTMNGQAIACSDGCQAIVDTGTSLL 281
Query: 873 TGPTEEIQALQAAIGGIPLLMGEYLIQCSKIPTLPPVSFHLGGVWFNLTAXDYVIQITRG 1052
GPT I +Q+ IG G+ +I CS I +LP + F + G+ + L Y++Q +G
Sbjct: 282 AGPTNAIANIQSYIGASQNSYGQMVISCSAINSLPDIVFTINGIQYPLPPSAYILQSQQG 341
Query: 1053 GASLCLSGFQALDMPPPTGPLWILGDVFLGSYVAVFDRGDRKNDARVGLA 1202
C+SGFQ +++P +G LWILGDVF+ Y AVFDR + +VGLA
Sbjct: 342 ----CVSGFQGMNLPTASGELWILGDVFIRQYFAVFDRANN----QVGLA 383
>ref|XP_854465.1| PREDICTED: similar to Gastricsin precursor (Pepsinogen C) [Canis
familiaris].
Length = 399
Score = 249 bits (637), Expect = 3e-66
Identities = 132/327 (40%), Positives = 189/327 (57%), Gaps = 2/327 (0%)
Frame = +3
Query: 204 FVPLSNYLNVQYYGEIGLGTPPQNFSVIFDTGSSNLWVPSGRCHFLSLPCWLHHRYHSKA 383
+ P +NYLN Y+GEI +GTPPQNF V+FDTGSSNLWVPS C S C H+ ++ +
Sbjct: 72 YEPFTNYLNSYYFGEISIGTPPQNFLVLFDTGSSNLWVPSTYCQ--SQACSNHNTFNPSS 129
Query: 384 SSSFHSNETKFAIQYGTGRLNGILSEDKLTIGGLTGASVIFGEALWEPSLVFAFAHFDGI 563
SS++ +N + + YG+G L +L D +T+ + + FG + EPS F +A+FDGI
Sbjct: 130 SSTYRNNGQTYTLYYGSGSLTVLLGYDTVTVQNIVINNQEFGLSEIEPSNPFYYANFDGI 189
Query: 564 LGLGFPVLAVGGVRPPLDSLVDQGLLDKPVFSFYLNRDPEAADGGELVLGGSDPAHYIPP 743
LG+ +P LAVG + S+V QG L +P+FSFY +R P GGEL+LGG D Y
Sbjct: 190 LGMAYPNLAVGDSPTVMQSMVQQGQLTQPIFSFYFSRQPTYEYGGELILGGVDTQFYSGE 249
Query: 744 LTFVPVTVPAYWQVHVERVHVGTGLT-LCAQGCAAILDTGTSLITGPTEEIQALQAAIGG 920
+ + PVT YWQV ++ V T LC+QGC AI+DTGT ++ P + + + G
Sbjct: 250 IVWAPVTREMYWQVAIDEFLVNNQATGLCSQGCQAIVDTGTYVLAVPQQFMGSFLQETGA 309
Query: 921 IPLLMGEYLIQCSKIPTLPPVSFHLGGVWFNLTAXDYVIQITRGGASLCLSGFQALDMPP 1100
G++++ C+ I ++P ++F + G L YV C G +A +P
Sbjct: 310 QEAQNGDFVVNCNSIQSMPTITFVISGSPLPLPPSAYVF----NNNGYCTLGIEATYLPS 365
Query: 1101 PTG-PLWILGDVFLGSYVAVFDRGDRK 1178
PTG PLW LGDVFL Y ++D + K
Sbjct: 366 PTGQPLWTLGDVFLKEYYTIYDLANNK 392
>ref|XP_547233.1| PREDICTED: similar to prochymosin [Canis familiaris].
Length = 400
Score = 245 bits (626), Expect = 5e-65
Identities = 138/333 (41%), Positives = 187/333 (56%)
Frame = +3
Query: 210 PLSNYLNVQYYGEIGLGTPPQNFSVIFDTGSSNLWVPSGRCHFLSLPCWLHHRYHSKASS 389
PL+NYL+ QY+G I +GTPPQ F+V+FDTGSS+LWVPS C S C HHR+ SS
Sbjct: 84 PLANYLDCQYFGRISIGTPPQEFTVVFDTGSSDLWVPSVYCK--STACQSHHRFDPAKSS 141
Query: 390 SFHSNETKFAIQYGTGRLNGILSEDKLTIGGLTGASVIFGEALWEPSLVFAFAHFDGILG 569
+F + +IQYGTG + G L D +T+ + G + EP +F ++ FDGILG
Sbjct: 142 TFQNLNEPLSIQYGTGSMQGFLGLDTVTVSSIVDPQQTVGLSTQEPGSIFTYSEFDGILG 201
Query: 570 LGFPVLAVGGVRPPLDSLVDQGLLDKPVFSFYLNRDPEAADGGELVLGGSDPAHYIPPLT 749
L +P LA P D+++ L+ + +FS YL+R+ + G L LG DP +Y L
Sbjct: 202 LAYPSLASPYSVPVFDNMMQNHLVAQDLFSVYLSRNGQ---GSMLTLGAIDPTYYTGALH 258
Query: 750 FVPVTVPAYWQVHVERVHVGTGLTLCAQGCAAILDTGTSLITGPTEEIQALQAAIGGIPL 929
+VPVTV YWQ V+ V V + C GC AILDTGTS++ GP +I +Q+AIG
Sbjct: 259 WVPVTVEEYWQFTVDSVTVNGVVVACDGGCQAILDTGTSMLVGPNSDILNIQSAIGATQD 318
Query: 930 LMGEYLIQCSKIPTLPPVSFHLGGVWFNLTAXDYVIQITRGGASLCLSGFQALDMPPPTG 1109
G + I C + ++P V F + G + L Y Q C SGFQ
Sbjct: 319 QYGMFDINCGNLGSMPSVVFEIHGRKYPLPPSAYTSQ----DMGFCSSGFQG----EGDS 370
Query: 1110 PLWILGDVFLGSYVAVFDRGDRKNDARVGLARA 1208
LWILGDVF+ Y +VFDR + R+GLA+A
Sbjct: 371 QLWILGDVFIREYYSVFDRVNN----RLGLAKA 399
>ref|NP_001003028.1| pepsin B precursor [Canis lupus familiaris].
Length = 390
Score = 243 bits (620), Expect = 3e-64
Identities = 131/335 (39%), Positives = 189/335 (56%), Gaps = 2/335 (0%)
Frame = +3
Query: 204 FVPLSNYLNVQYYGEIGLGTPPQNFSVIFDTGSSNLWVPSGRCHFLSLPCWLHHRYHSKA 383
+ P +NYL+ Y+GEI +GTPPQNF ++FDTGSSNLWVPS C S C H+R++
Sbjct: 63 YEPFTNYLDSYYFGEISIGTPPQNFLILFDTGSSNLWVPSTYCQ--SQACSNHNRFNPSR 120
Query: 384 SSSFHSNETKFAIQYGTGRLNGILSEDKLTIGGLTGASVIFGEALWEPSLVFAFAHFDGI 563
SS++ S+E + + YG G L +L D +T+ + + +FG + EP+ F +++FDGI
Sbjct: 121 SSTYQSSEQTYTLAYGFGSLTVLLGYDTVTVQNIVIHNQLFGMSENEPNYPFYYSYFDGI 180
Query: 564 LGLGFPVLAVGGVRPPLDSLVDQGLLDKPVFSFYLNRDPEAADGGELVLGGSDPAHYIPP 743
LG+ + LAV L +++ QG L +P+FSFY + P GGEL+LGG D Y
Sbjct: 181 LGMAYSNLAVDNGPTVLQNMMQQGQLTQPIFSFYFSPQPTYEYGGELILGGVDTQFYSGE 240
Query: 744 LTFVPVTVPAYWQVHVERVHVGTGLT-LCAQGCAAILDTGTSLITGPTEEIQALQAAIGG 920
+ + PVT YWQV ++ +G T LC+QGC I+DTGT +T P + + + A G
Sbjct: 241 IVWAPVTREMYWQVAIDEFLIGNQATGLCSQGCQGIVDTGTFPLTVPQQYLDSFVKATGA 300
Query: 921 IPLLMGEYLIQCSKIPTLPPVSFHLGGVWFNLTAXDYVIQITRGGASLCLSGFQALDMPP 1100
G +++ C+ I ++P ++F + G L YV+ C G + +P
Sbjct: 301 QQDQSGNFVVNCNSIQSMPTITFVISGSPLPLPPSTYVL----NNNGYCTLGIEVTYLPS 356
Query: 1101 PTG-PLWILGDVFLGSYVAVFDRGDRKNDARVGLA 1202
P G PLWILGDVFL Y VFD RVG A
Sbjct: 357 PNGQPLWILGDVFLREYYTVFDMAAN----RVGFA 387
>ref|XP_540923.2| PREDICTED: similar to pepsinogen 5, group I (pepsinogen A) [Canis
familiaris].
Length = 380
Score = 230 bits (587), Expect = 2e-60
Identities = 134/332 (40%), Positives = 188/332 (56%)
Frame = +3
Query: 213 LSNYLNVQYYGEIGLGTPPQNFSVIFDTGSSNLWVPSGRCHFLSLPCWLHHRYHSKASSS 392
+ NYL++ Y G I +GTPPQ F VIFDTGSS+LWVPS C S C H+ ++ S++
Sbjct: 59 MRNYLDLAYVGTIRIGTPPQEFKVIFDTGSSDLWVPSIYCS--SPACANHNVFNPLLSTT 116
Query: 393 FHSNETKFAIQYGTGRLNGILSEDKLTIGGLTGASVIFGEALWEPSLVFAFAHFDGILGL 572
F + +QYG+G ++G L+ D + GL S FG +L EP +A FDGILGL
Sbjct: 117 FRVSGRPIHLQYGSGTMSGFLAYDTIRFEGLVDESQAFGLSLREPGKFMEYAVFDGILGL 176
Query: 573 GFPVLAVGGVRPPLDSLVDQGLLDKPVFSFYLNRDPEAADGGELVLGGSDPAHYIPPLTF 752
+P L++ G P D+L QGL+ + +F+FYL++ E +G ++ G D ++Y L +
Sbjct: 177 AYPSLSLQGTIPIFDNLWKQGLIAQELFAFYLSKKEE--EGSVVMFGDVDHSYYRGDLNW 234
Query: 753 VPVTVPAYWQVHVERVHVGTGLTLCAQGCAAILDTGTSLITGPTEEIQALQAAIGGIPLL 932
VPV+ P YWQ+ ++ + V + C+ GC AI+DTGTSL+ GP + +Q I
Sbjct: 235 VPVSKPFYWQLSMDSISVNGAVIACSGGCEAIIDTGTSLLIGPPSVVLNIQKIINAKRSY 294
Query: 933 MGEYLIQCSKIPTLPPVSFHLGGVWFNLTAXDYVIQITRGGASLCLSGFQALDMPPPTGP 1112
GE++I CS I TLP + F + GV + + A Y I G C S F
Sbjct: 295 SGEFMIDCSTINTLPDIVFAINGVNYPVPASAY---IREGQEGTCYSNFDEGRGGLFVSD 351
Query: 1113 LWILGDVFLGSYVAVFDRGDRKNDARVGLARA 1208
WILGDVFL Y VF+RG ND +GLA A
Sbjct: 352 SWILGDVFLRLYFTVFNRG---NDT-IGLAPA 379
>ref|XP_852244.1| PREDICTED: similar to Gastricsin precursor (Pepsinogen C) [Canis
familiaris].
Length = 271
Score = 107 bits (267), Expect = 2e-23
Identities = 60/152 (39%), Positives = 87/152 (57%), Gaps = 7/152 (4%)
Frame = +3
Query: 240 YGEIGLGTPPQNFSVIFDTGSSNLWVPSGRCHFLSLPCWLHHRYHSKASSSFHSNETKFA 419
+GEI + TPPQNF V+FDTGSS+LWVPS C S C H+ + +SS++ +N +
Sbjct: 19 FGEISIETPPQNFLVLFDTGSSDLWVPSIYCQ--SQACSNHNTFSPSSSSTYRNNGQTYT 76
Query: 420 IQYGTGRLNGILSEDKLTIGGLTGASVIFGEALWEPSLVFAFAHFDGILGLGFPVLAVGG 599
+ YG+G L +L D +T+ + S FG + EPS F +A+FDGILG+ +P LAVG
Sbjct: 77 LYYGSGSLTVLLGYDSVTVQNIIINSQEFGLSEIEPSNPFYYANFDGILGMAYPNLAVGD 136
Query: 600 VRPPLDSLVD-------QGLLDKPVFSFYLNR 674
+ S+ QG++D F + R
Sbjct: 137 SPTVMQSMATGLCSQGCQGIMDTGTFPLTIPR 168
Score = 55.5 bits (132), Expect = 1e-07
Identities = 30/114 (26%), Positives = 52/114 (45%)
Frame = +3
Query: 822 LCAQGCAAILDTGTSLITGPTEEIQALQAAIGGIPLLMGEYLIQCSKIPTLPPVSFHLGG 1001
LC+QGC I+DTGT +T P + + + G G +++ C+ I ++P ++F + G
Sbjct: 148 LCSQGCQGIMDTGTFPLTIPRQYLDSFVKTTGAQQDQSGIFVVNCNSIQSMPTITFVISG 207
Query: 1002 VWFNLTAXDYVIQITRGGASLCLSGFQALDMPPPTGPLWILGDVFLGSYVAVFD 1163
L Y+ G C G + ++P P G D+ + V+D
Sbjct: 208 SPLPLPPSIYMFSTYNNG--YCTLGIEVTNLPSPMGSPCGFWDMSSSGNITVYD 259
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 57,664,900
Number of extensions: 1905431
Number of successful extensions: 9462
Number of sequences better than 1.0e-05: 13
Number of HSP's gapped: 9339
Number of HSP's successfully gapped: 14
Length of query: 408
Length of database: 18,874,504
Length adjustment: 105
Effective length of query: 303
Effective length of database: 15,374,224
Effective search space: 4658389872
Effective search space used: 4658389872
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-003661
(1224 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_004842.1| napsin-A preproprotein [Homo sapiens]. 653 0.0
Alignment gi|NP_001900.1| cathepsin D preproprotein [Homo sapiens]. 383 e-106
Alignment gi|NP_001901.1| cathepsin E isoform a preproprotein [Homo sapie... 332 3e-91
Alignment gi|NP_000528.1| renin preproprotein [Homo sapiens]. 309 3e-84
Alignment gi|NP_001073276.1| pepsin A preproprotein [Homo sapiens]. 285 8e-77
Alignment gi|NP_001073275.1| pepsin A preproprotein [Homo sapiens]. 285 8e-77
Alignment gi|NP_055039.1| pepsin A preproprotein [Homo sapiens]. 284 1e-76
Alignment gi|NP_002621.1| gastricsin isoform 1 preproprotein [Homo sapien... 245 5e-65
Alignment gi|NP_683865.1| cathepsin E isoform b preproprotein [Homo sapie... 205 6e-53
Alignment gi|NP_001159896.1| gastricsin isoform 2 preproprotein [Homo sap... 138 9e-33
>ref|NP_004842.1| napsin-A preproprotein [Homo sapiens].
Length = 420
Score = 653 bits (1684), Expect = 0.0
Identities = 316/386 (81%), Positives = 341/386 (88%), Gaps = 1/386 (0%)
Frame = +3
Query: 66 EPAGAMLIRIPLRRVHAGLRTLNPLRAWEKSAEPPRLGAPSPGDKT-FVPLSNYLNVQYY 242
EP+GA LIRIPL RV G R LN LR W + AE P+LGAPSPGDK FVPLSNY +VQY+
Sbjct: 20 EPSGATLIRIPLHRVQPGRRILNLLRGWREPAELPKLGAPSPGDKPIFVPLSNYRDVQYF 79
Query: 243 GEIGLGTPPQNFSVIFDTGSSNLWVPSGRCHFLSLPCWLHHRYHSKASSSFHSNETKFAI 422
GEIGLGTPPQNF+V FDTGSSNLWVPS RCHF S+PCWLHHR+ KASSSF +N TKFAI
Sbjct: 80 GEIGLGTPPQNFTVAFDTGSSNLWVPSRRCHFFSVPCWLHHRFDPKASSSFQANGTKFAI 139
Query: 423 QYGTGRLNGILSEDKLTIGGLTGASVIFGEALWEPSLVFAFAHFDGILGLGFPVLAVGGV 602
QYGTGR++GILSEDKLTIGG+ GASVIFGEALWEPSLVFAFAHFDGILGLGFP+L+V GV
Sbjct: 140 QYGTGRVDGILSEDKLTIGGIKGASVIFGEALWEPSLVFAFAHFDGILGLGFPILSVEGV 199
Query: 603 RPPLDSLVDQGLLDKPVFSFYLNRDPEAADGGELVLGGSDPAHYIPPLTFVPVTVPAYWQ 782
RPP+D LV+QGLLDKPVFSFYLNRDPE DGGELVLGGSDPAHYIPPLTFVPVTVPAYWQ
Sbjct: 200 RPPMDVLVEQGLLDKPVFSFYLNRDPEEPDGGELVLGGSDPAHYIPPLTFVPVTVPAYWQ 259
Query: 783 VHVERVHVGTGLTLCAQGCAAILDTGTSLITGPTEEIQALQAAIGGIPLLMGEYLIQCSK 962
+H+ERV VG GLTLCA+GCAAILDTGTSLITGPTEEI+AL AAIGGIPLL GEY+I CS+
Sbjct: 260 IHMERVKVGPGLTLCAKGCAAILDTGTSLITGPTEEIRALHAAIGGIPLLAGEYIILCSE 319
Query: 963 IPTLPPVSFHLGGVWFNLTAXDYVIQITRGGASLCLSGFQALDMPPPTGPLWILGDVFLG 1142
IP LP VSF LGGVWFNLTA DYVIQ TR G LCLSGFQALD+PPP GP WILGDVFLG
Sbjct: 320 IPKLPAVSFLLGGVWFNLTAHDYVIQTTRNGVRLCLSGFQALDVPPPAGPFWILGDVFLG 379
Query: 1143 SYVAVFDRGDRKNDARVGLARARAHG 1220
+YVAVFDRGD K+ ARVGLARAR G
Sbjct: 380 TYVAVFDRGDMKSSARVGLARARTRG 405
>ref|NP_001900.1| cathepsin D preproprotein [Homo sapiens].
Length = 412
Score = 383 bits (983), Expect = e-106
Identities = 191/401 (47%), Positives = 265/401 (66%), Gaps = 21/401 (5%)
Frame = +3
Query: 69 PAGAMLIRIPLRRVHAGLRTLNPLRAWEKSAEPPRLGAPSPGDKTFVP----------LS 218
PA A L+RIPL + + RT++ + S E P VP L
Sbjct: 17 PASA-LVRIPLHKFTSIRRTMSEVGG---SVEDLIAKGPVSKYSQAVPAVTEGPIPEVLK 72
Query: 219 NYLNVQYYGEIGLGTPPQNFSVIFDTGSSNLWVPSGRCHFLSLPCWLHHRYHSKASSSFH 398
NY++ QYYGEIG+GTPPQ F+V+FDTGSSNLWVPS C L + CW+HH+Y+S SS++
Sbjct: 73 NYMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACWIHHKYNSDKSSTYV 132
Query: 399 SNETKFAIQYGTGRLNGILSEDKLTI-----------GGLTGASVIFGEALWEPSLVFAF 545
N T F I YG+G L+G LS+D +++ GG+ +FGEA +P + F
Sbjct: 133 KNGTSFDIHYGSGSLSGYLSQDTVSVPCQSASSASALGGVKVERQVFGEATKQPGITFIA 192
Query: 546 AHFDGILGLGFPVLAVGGVRPPLDSLVDQGLLDKPVFSFYLNRDPEAADGGELVLGGSDP 725
A FDGILG+ +P ++V V P D+L+ Q L+D+ +FSFYL+RDP+A GGEL+LGG+D
Sbjct: 193 AKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDQNIFSFYLSRDPDAQPGGELMLGGTDS 252
Query: 726 AHYIPPLTFVPVTVPAYWQVHVERVHVGTGLTLCAQGCAAILDTGTSLITGPTEEIQALQ 905
+Y L+++ VT AYWQVH+++V V +GLTLC +GC AI+DTGTSL+ GP +E++ LQ
Sbjct: 253 KYYKGSLSYLNVTRKAYWQVHLDQVEVASGLTLCKEGCEAIVDTGTSLMVGPVDEVRELQ 312
Query: 906 AAIGGIPLLMGEYLIQCSKIPTLPPVSFHLGGVWFNLTAXDYVIQITRGGASLCLSGFQA 1085
AIG +PL+ GEY+I C K+ TLP ++ LGG + L+ DY +++++ G +LCLSGF
Sbjct: 313 KAIGAVPLIQGEYMIPCEKVSTLPAITLKLGGKGYKLSPEDYTLKVSQAGKTLCLSGFMG 372
Query: 1086 LDMPPPTGPLWILGDVFLGSYVAVFDRGDRKNDARVGLARA 1208
+D+PPP+GPLWILGDVF+G Y VFDR ++ RVG A A
Sbjct: 373 MDIPPPSGPLWILGDVFIGRYYTVFDR----DNNRVGFAEA 409
>ref|NP_001901.1| cathepsin E isoform a preproprotein [Homo sapiens].
Length = 396
Score = 332 bits (852), Expect = 3e-91
Identities = 177/385 (45%), Positives = 243/385 (63%), Gaps = 6/385 (1%)
Frame = +3
Query: 72 AGAMLIRIPLRR---VHAGLRTLNPLRAWEKSAEPPRLG---APSPGDKTFVPLSNYLNV 233
A L R+PLRR + LR + L + KS + + S PL NYL++
Sbjct: 17 AQGSLHRVPLRRHPSLKKKLRARSQLSEFWKSHNLDMIQFTESCSMDQSAKEPLINYLDM 76
Query: 234 QYYGEIGLGTPPQNFSVIFDTGSSNLWVPSGRCHFLSLPCWLHHRYHSKASSSFHSNETK 413
+Y+G I +G+PPQNF+VIFDTGSSNLWVPS C S C H R+ SS++
Sbjct: 77 EYFGTISIGSPPQNFTVIFDTGSSNLWVPSVYC--TSPACKTHSRFQPSQSSTYSQPGQS 134
Query: 414 FAIQYGTGRLNGILSEDKLTIGGLTGASVIFGEALWEPSLVFAFAHFDGILGLGFPVLAV 593
F+IQYGTG L+GI+ D++++ GLT FGE++ EP F A FDGILGLG+P LAV
Sbjct: 135 FSIQYGTGSLSGIIGADQVSVEGLTVVGQQFGESVTEPGQTFVDAEFDGILGLGYPSLAV 194
Query: 594 GGVRPPLDSLVDQGLLDKPVFSFYLNRDPEAADGGELVLGGSDPAHYIPPLTFVPVTVPA 773
GGV P D+++ Q L+D P+FS Y++ +PE G EL+ GG D +H+ L +VPVT A
Sbjct: 195 GGVTPVFDNMMAQNLVDLPMFSVYMSSNPEGGAGSELIFGGYDHSHFSGSLNWVPVTKQA 254
Query: 774 YWQVHVERVHVGTGLTLCAQGCAAILDTGTSLITGPTEEIQALQAAIGGIPLLMGEYLIQ 953
YWQ+ ++ + VG + C++GC AI+DTGTSLITGP+++I+ LQ AIG P + GEY ++
Sbjct: 255 YWQIALDNIQVGGTVMFCSEGCQAIVDTGTSLITGPSDKIKQLQNAIGAAP-VDGEYAVE 313
Query: 954 CSKIPTLPPVSFHLGGVWFNLTAXDYVIQITRGGASLCLSGFQALDMPPPTGPLWILGDV 1133
C+ + +P V+F + GV + L+ Y + G C SGFQ LD+ PP GPLWILGDV
Sbjct: 314 CANLNVMPDVTFTINGVPYTLSPTAYTLLDFVDGMQFCSSGFQGLDIHPPAGPLWILGDV 373
Query: 1134 FLGSYVAVFDRGDRKNDARVGLARA 1208
F+ + +VFDRG+ RVGLA A
Sbjct: 374 FIRQFYSVFDRGNN----RVGLAPA 394
>ref|NP_000528.1| renin preproprotein [Homo sapiens].
Length = 406
Score = 309 bits (792), Expect = 3e-84
Identities = 154/337 (45%), Positives = 215/337 (63%), Gaps = 2/337 (0%)
Frame = +3
Query: 207 VPLSNYLNVQYYGEIGLGTPPQNFSVIFDTGSSNLWVPSGRCHFLSLPCWLHHRYHSKAS 386
V L+NY++ QYYGEIG+GTPPQ F V+FDTGSSN+WVPS +C L C H + + S
Sbjct: 76 VILTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYHKLFDASDS 135
Query: 387 SSFHSNETKFAIQYGTGRLNGILSEDKLTIGGLTGASVIFGEALWEPSLVFAFAHFDGIL 566
SS+ N T+ ++Y TG ++G LS+D +T+GG+T + +FGE P+L F A FDG++
Sbjct: 136 SSYKHNGTELTLRYSTGTVSGFLSQDIITVGGIT-VTQMFGEVTEMPALPFMLAEFDGVV 194
Query: 567 GLGFPVLAVGGVRPPLDSLVDQGLLDKPVFSFYLNRDPEAAD--GGELVLGGSDPAHYIP 740
G+GF A+G V P D+++ QG+L + VFSFY NRD E + GG++VLGGSDP HY
Sbjct: 195 GMGFIEQAIGRVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEG 254
Query: 741 PLTFVPVTVPAYWQVHVERVHVGTGLTLCAQGCAAILDTGTSLITGPTEEIQALQAAIGG 920
++ + WQ+ ++ V VG+ LC GC A++DTG S I+G T I+ L A+G
Sbjct: 255 NFHYINLIKTGVWQIQMKGVSVGSSTLLCEDGCLALVDTGASYISGSTSSIEKLMEALGA 314
Query: 921 IPLLMGEYLIQCSKIPTLPPVSFHLGGVWFNLTAXDYVIQITRGGASLCLSGFQALDMPP 1100
L +Y+++C++ PTLP +SFHLGG + LT+ DYV Q + LC A+D+PP
Sbjct: 315 KKRLF-DYVVKCNEGPTLPDISFHLGGKEYTLTSADYVFQESYSSKKLCTLAIHAMDIPP 373
Query: 1101 PTGPLWILGDVFLGSYVAVFDRGDRKNDARVGLARAR 1211
PTGP W LG F+ + FDR R N R+G A AR
Sbjct: 374 PTGPTWALGATFIRKFYTEFDR--RNN--RIGFALAR 406
>ref|NP_001073276.1| pepsin A preproprotein [Homo sapiens].
Length = 388
Score = 285 bits (728), Expect = 8e-77
Identities = 150/358 (41%), Positives = 221/358 (61%)
Frame = +3
Query: 129 LNPLRAWEKSAEPPRLGAPSPGDKTFVPLSNYLNVQYYGEIGLGTPPQNFSVIFDTGSSN 308
LNP R + P+ AP+ D+ PL NYL+++Y+G IG+GTP Q+F+V+FDTGSSN
Sbjct: 47 LNPARKYF-----PQWEAPTLVDEQ--PLENYLDMEYFGTIGIGTPAQDFTVVFDTGSSN 99
Query: 309 LWVPSGRCHFLSLPCWLHHRYHSKASSSFHSNETKFAIQYGTGRLNGILSEDKLTIGGLT 488
LWVPS C SL C H+R++ + SS++ S +I YGTG + GIL D + +GG++
Sbjct: 100 LWVPSVYCS--SLACTNHNRFNPEDSSTYQSTSETVSITYGTGSMTGILGYDTVQVGGIS 157
Query: 489 GASVIFGEALWEPSLVFAFAHFDGILGLGFPVLAVGGVRPPLDSLVDQGLLDKPVFSFYL 668
+ IFG + EP +A FDGILGL +P ++ G P D++ +QGL+ + +FS YL
Sbjct: 158 DTNQIFGLSETEPGSFLYYAPFDGILGLAYPSISSSGATPVFDNIWNQGLVSQDLFSVYL 217
Query: 669 NRDPEAADGGELVLGGSDPAHYIPPLTFVPVTVPAYWQVHVERVHVGTGLTLCAQGCAAI 848
+ D ++ G ++ GG D ++Y L +VPVTV YWQ+ V+ + + CA+GC AI
Sbjct: 218 SADDQS--GSVVIFGGIDSSYYTGSLNWVPVTVEGYWQITVDSITMNGEAIACAEGCQAI 275
Query: 849 LDTGTSLITGPTEEIQALQAAIGGIPLLMGEYLIQCSKIPTLPPVSFHLGGVWFNLTAXD 1028
+DTGTSL+TGPT I +Q+ IG G+ ++ CS I +LP + F + GV + +
Sbjct: 276 VDTGTSLLTGPTSPIANIQSDIGASENSDGDMVVSCSAISSLPDIVFTINGVQYPVPPSA 335
Query: 1029 YVIQITRGGASLCLSGFQALDMPPPTGPLWILGDVFLGSYVAVFDRGDRKNDARVGLA 1202
Y++Q C+SGFQ +++P +G LWILGDVF+ Y VFDR + +VGLA
Sbjct: 336 YILQ----SEGSCISGFQGMNLPTESGELWILGDVFIRQYFTVFDRANN----QVGLA 385
>ref|NP_001073275.1| pepsin A preproprotein [Homo sapiens].
Length = 388
Score = 285 bits (728), Expect = 8e-77
Identities = 150/358 (41%), Positives = 221/358 (61%)
Frame = +3
Query: 129 LNPLRAWEKSAEPPRLGAPSPGDKTFVPLSNYLNVQYYGEIGLGTPPQNFSVIFDTGSSN 308
LNP R + P+ AP+ D+ PL NYL+++Y+G IG+GTP Q+F+V+FDTGSSN
Sbjct: 47 LNPARKYF-----PQWKAPTLVDEQ--PLENYLDMEYFGTIGIGTPAQDFTVVFDTGSSN 99
Query: 309 LWVPSGRCHFLSLPCWLHHRYHSKASSSFHSNETKFAIQYGTGRLNGILSEDKLTIGGLT 488
LWVPS C SL C H+R++ + SS++ S +I YGTG + GIL D + +GG++
Sbjct: 100 LWVPSVYCS--SLACTNHNRFNPEDSSTYQSTSETVSITYGTGSMTGILGYDTVQVGGIS 157
Query: 489 GASVIFGEALWEPSLVFAFAHFDGILGLGFPVLAVGGVRPPLDSLVDQGLLDKPVFSFYL 668
+ IFG + EP +A FDGILGL +P ++ G P D++ +QGL+ + +FS YL
Sbjct: 158 DTNQIFGLSETEPGSFLYYAPFDGILGLAYPSISSSGATPVFDNIWNQGLVSQDLFSVYL 217
Query: 669 NRDPEAADGGELVLGGSDPAHYIPPLTFVPVTVPAYWQVHVERVHVGTGLTLCAQGCAAI 848
+ D ++ G ++ GG D ++Y L +VPVTV YWQ+ V+ + + CA+GC AI
Sbjct: 218 SADDQS--GSVVIFGGIDSSYYTGSLNWVPVTVEGYWQITVDSITMNGEAIACAEGCQAI 275
Query: 849 LDTGTSLITGPTEEIQALQAAIGGIPLLMGEYLIQCSKIPTLPPVSFHLGGVWFNLTAXD 1028
+DTGTSL+TGPT I +Q+ IG G+ ++ CS I +LP + F + GV + +
Sbjct: 276 VDTGTSLLTGPTSPIANIQSDIGASENSDGDMVVSCSAISSLPDIVFTINGVQYPVPPSA 335
Query: 1029 YVIQITRGGASLCLSGFQALDMPPPTGPLWILGDVFLGSYVAVFDRGDRKNDARVGLA 1202
Y++Q C+SGFQ +++P +G LWILGDVF+ Y VFDR + +VGLA
Sbjct: 336 YILQ----SEGSCISGFQGMNLPTESGELWILGDVFIRQYFTVFDRANN----QVGLA 385
>ref|NP_055039.1| pepsin A preproprotein [Homo sapiens].
Length = 388
Score = 284 bits (726), Expect = 1e-76
Identities = 150/358 (41%), Positives = 221/358 (61%)
Frame = +3
Query: 129 LNPLRAWEKSAEPPRLGAPSPGDKTFVPLSNYLNVQYYGEIGLGTPPQNFSVIFDTGSSN 308
LNP R + P+ AP+ D+ PL NYL+++Y+G IG+GTP Q+F+V+FDTGSSN
Sbjct: 47 LNPARKYF-----PQWEAPTLVDEQ--PLENYLDMEYFGTIGIGTPAQDFTVVFDTGSSN 99
Query: 309 LWVPSGRCHFLSLPCWLHHRYHSKASSSFHSNETKFAIQYGTGRLNGILSEDKLTIGGLT 488
LWVPS C SL C H+R++ + SS++ S +I YGTG + GIL D + +GG++
Sbjct: 100 LWVPSVYCS--SLACTNHNRFNPEDSSTYQSTSETVSITYGTGSMTGILGYDTVQVGGIS 157
Query: 489 GASVIFGEALWEPSLVFAFAHFDGILGLGFPVLAVGGVRPPLDSLVDQGLLDKPVFSFYL 668
+ IFG + EP +A FDGILGL +P ++ G P D++ +QGL+ + +FS YL
Sbjct: 158 DTNQIFGLSETEPGSFLYYAPFDGILGLAYPSISSSGATPVFDNIWNQGLVSQDLFSVYL 217
Query: 669 NRDPEAADGGELVLGGSDPAHYIPPLTFVPVTVPAYWQVHVERVHVGTGLTLCAQGCAAI 848
+ D ++ G ++ GG D ++Y L +VPVTV YWQ+ V+ + + CA+GC AI
Sbjct: 218 SADDKS--GSVVIFGGIDSSYYTGSLNWVPVTVEGYWQITVDSITMNGETIACAEGCQAI 275
Query: 849 LDTGTSLITGPTEEIQALQAAIGGIPLLMGEYLIQCSKIPTLPPVSFHLGGVWFNLTAXD 1028
+DTGTSL+TGPT I +Q+ IG G+ ++ CS I +LP + F + GV + +
Sbjct: 276 VDTGTSLLTGPTSPIANIQSDIGASENSDGDMVVSCSAISSLPDIVFTINGVQYPVPPSA 335
Query: 1029 YVIQITRGGASLCLSGFQALDMPPPTGPLWILGDVFLGSYVAVFDRGDRKNDARVGLA 1202
Y++Q C+SGFQ +++P +G LWILGDVF+ Y VFDR + +VGLA
Sbjct: 336 YILQ----SEGSCISGFQGMNVPTESGELWILGDVFIRQYFTVFDRANN----QVGLA 385
>ref|NP_002621.1| gastricsin isoform 1 preproprotein [Homo sapiens].
Length = 388
Score = 245 bits (626), Expect = 5e-65
Identities = 136/338 (40%), Positives = 195/338 (57%), Gaps = 2/338 (0%)
Frame = +3
Query: 201 TFVPLSNYLNVQYYGEIGLGTPPQNFSVIFDTGSSNLWVPSGRCHFLSLPCWLHHRYHSK 380
T+ P++ Y++ Y+GEI +GTPPQNF V+FDTGSSNLWVPS C S C H R++
Sbjct: 62 TYEPMA-YMDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQ--SQACTSHSRFNPS 118
Query: 381 ASSSFHSNETKFAIQYGTGRLNGILSEDKLTIGGLTGASVIFGEALWEPSLVFAFAHFDG 560
SS++ +N F++QYG+G L G D LT+ + + FG + EP F +A FDG
Sbjct: 119 ESSTYSTNGQTFSLQYGSGSLTGFFGYDTLTVQSIQVPNQEFGLSENEPGTNFVYAQFDG 178
Query: 561 ILGLGFPVLAVGGVRPPLDSLVDQGLLDKPVFSFYLNRDPEAADGGELVLGGSDPAHYIP 740
I+GL +P L+V + +V +G L PVFS YL+ + + + GG +V GG D + Y
Sbjct: 179 IMGLAYPALSVDEATTAMQGMVQEGALTSPVFSVYLS-NQQGSSGGAVVFGGVDSSLYTG 237
Query: 741 PLTFVPVTVPAYWQVHVERVHVGTGLT-LCAQGCAAILDTGTSLITGPTEEIQALQAAIG 917
+ + PVT YWQ+ +E +G + C++GC AI+DTGTSL+T P + + AL A G
Sbjct: 238 QIYWAPVTQELYWQIGIEEFLIGGQASGWCSEGCQAIVDTGTSLLTVPQQYMSALLQATG 297
Query: 918 GIPLLMGEYLIQCSKIPTLPPVSFHLGGVWFNLTAXDYVIQITRGGASLCLSGFQALDMP 1097
G++L+ C+ I LP ++F + GV F L Y++ C G + +
Sbjct: 298 AQEDEYGQFLVNCNSIQNLPSLTFIINGVEFPLPPSSYIL----SNNGYCTVGVEPTYLS 353
Query: 1098 PPTG-PLWILGDVFLGSYVAVFDRGDRKNDARVGLARA 1208
G PLWILGDVFL SY +V+D G+ RVG A A
Sbjct: 354 SQNGQPLWILGDVFLRSYYSVYDLGNN----RVGFATA 387
>ref|NP_683865.1| cathepsin E isoform b preproprotein [Homo sapiens].
Length = 363
Score = 205 bits (522), Expect = 6e-53
Identities = 111/249 (44%), Positives = 153/249 (61%), Gaps = 6/249 (2%)
Frame = +3
Query: 72 AGAMLIRIPLRR---VHAGLRTLNPLRAWEKSAEPPRLG---APSPGDKTFVPLSNYLNV 233
A L R+PLRR + LR + L + KS + + S PL NYL++
Sbjct: 17 AQGSLHRVPLRRHPSLKKKLRARSQLSEFWKSHNLDMIQFTESCSMDQSAKEPLINYLDM 76
Query: 234 QYYGEIGLGTPPQNFSVIFDTGSSNLWVPSGRCHFLSLPCWLHHRYHSKASSSFHSNETK 413
+Y+G I +G+PPQNF+VIFDTGSSNLWVPS C S C H R+ SS++
Sbjct: 77 EYFGTISIGSPPQNFTVIFDTGSSNLWVPSVYC--TSPACKTHSRFQPSQSSTYSQPGQS 134
Query: 414 FAIQYGTGRLNGILSEDKLTIGGLTGASVIFGEALWEPSLVFAFAHFDGILGLGFPVLAV 593
F+IQYGTG L+GI+ D++++ GLT FGE++ EP F A FDGILGLG+P LAV
Sbjct: 135 FSIQYGTGSLSGIIGADQVSVEGLTVVGQQFGESVTEPGQTFVDAEFDGILGLGYPSLAV 194
Query: 594 GGVRPPLDSLVDQGLLDKPVFSFYLNRDPEAADGGELVLGGSDPAHYIPPLTFVPVTVPA 773
GGV P D+++ Q L+D P+FS Y++ +PE G EL+ GG D +H+ L +VPVT A
Sbjct: 195 GGVTPVFDNMMAQNLVDLPMFSVYMSSNPEGGAGSELIFGGYDHSHFSGSLNWVPVTKQA 254
Query: 774 YWQVHVERV 800
YWQ+ ++ +
Sbjct: 255 YWQIALDNM 263
>ref|NP_001159896.1| gastricsin isoform 2 preproprotein [Homo sapiens].
Length = 315
Score = 138 bits (348), Expect = 9e-33
Identities = 69/157 (43%), Positives = 97/157 (61%)
Frame = +3
Query: 201 TFVPLSNYLNVQYYGEIGLGTPPQNFSVIFDTGSSNLWVPSGRCHFLSLPCWLHHRYHSK 380
T+ P++ Y++ Y+GEI +GTPPQNF V+FDTGSSNLWVPS C S C H R++
Sbjct: 62 TYEPMA-YMDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQ--SQACTSHSRFNPS 118
Query: 381 ASSSFHSNETKFAIQYGTGRLNGILSEDKLTIGGLTGASVIFGEALWEPSLVFAFAHFDG 560
SS++ +N F++QYG+G L G D LT+ + + FG + EP F +A FDG
Sbjct: 119 ESSTYSTNGQTFSLQYGSGSLTGFFGYDTLTVQSIQVPNQEFGLSENEPGTNFVYAQFDG 178
Query: 561 ILGLGFPVLAVGGVRPPLDSLVDQGLLDKPVFSFYLN 671
I+GL +P L+V + +V +G L PVFS YL+
Sbjct: 179 IMGLAYPALSVDEATTAMQGMVQEGALTSPVFSVYLS 215
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 56,238,137
Number of extensions: 1837674
Number of successful extensions: 8956
Number of sequences better than 1.0e-05: 17
Number of HSP's gapped: 8820
Number of HSP's successfully gapped: 18
Length of query: 408
Length of database: 18,297,164
Length adjustment: 105
Effective length of query: 303
Effective length of database: 14,835,944
Effective search space: 4495291032
Effective search space used: 4495291032
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-003661
(1224 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_032463.1| napsin-A precursor [Mus musculus]. 599 e-171
Alignment gi|NP_034113.1| cathepsin D precursor [Mus musculus]. 386 e-107
Alignment gi|NP_031825.2| cathepsin E preproprotein [Mus musculus]. 331 8e-91
Alignment gi|NP_112470.2| renin-2 [Mus musculus]. 327 9e-90
Alignment gi|NP_112469.1| renin-1 precursor [Mus musculus]. 326 3e-89
Alignment gi|XP_001472682.1| PREDICTED: renin-1-like isoform 1 [Mus muscu... 324 1e-88
Alignment gi|NP_080249.2| gastricsin precursor [Mus musculus]. 249 2e-66
Alignment gi|NP_067428.2| pepsinogen 5, group I [Mus musculus]. 247 1e-65
Alignment gi|NP_001104613.1| embryonic pepsinogen [Mus musculus]. 234 1e-61
Alignment gi|NP_062390.3| beta-secretase 2 [Mus musculus]. 88 1e-17
>ref|NP_032463.1| napsin-A precursor [Mus musculus].
Length = 419
Score = 599 bits (1545), Expect = e-171
Identities = 284/383 (74%), Positives = 322/383 (84%)
Frame = +3
Query: 66 EPAGAMLIRIPLRRVHAGLRTLNPLRAWEKSAEPPRLGAPSPGDKTFVPLSNYLNVQYYG 245
EP A LIR+PL+R+H G R LNPL WE+ AE R S G+ +FVPLS ++N QY+G
Sbjct: 17 EPEEAKLIRVPLQRIHLGHRILNPLNGWEQLAELSRTST-SGGNPSFVPLSKFMNTQYFG 75
Query: 246 EIGLGTPPQNFSVIFDTGSSNLWVPSGRCHFLSLPCWLHHRYHSKASSSFHSNETKFAIQ 425
IGLGTPPQNF+V+FDTGSSNLWVPS RCHF SL CW HHR++ KASSSF N TKFAIQ
Sbjct: 76 TIGLGTPPQNFTVVFDTGSSNLWVPSTRCHFFSLACWFHHRFNPKASSSFRPNGTKFAIQ 135
Query: 426 YGTGRLNGILSEDKLTIGGLTGASVIFGEALWEPSLVFAFAHFDGILGLGFPVLAVGGVR 605
YGTGRL+GILS+D LTIGG+ A V FGEALWEPSL+FA AHFDGILGLGFP LAVGGV+
Sbjct: 136 YGTGRLSGILSQDNLTIGGIHDAFVTFGEALWEPSLIFALAHFDGILGLGFPTLAVGGVQ 195
Query: 606 PPLDSLVDQGLLDKPVFSFYLNRDPEAADGGELVLGGSDPAHYIPPLTFVPVTVPAYWQV 785
PPLD++V+QGLL+KPVFSFYLNRD E +DGGELVLGGSDPAHY+PPLTF+PVT+PAYWQV
Sbjct: 196 PPLDAMVEQGLLEKPVFSFYLNRDSEGSDGGELVLGGSDPAHYVPPLTFIPVTIPAYWQV 255
Query: 786 HVERVHVGTGLTLCAQGCAAILDTGTSLITGPTEEIQALQAAIGGIPLLMGEYLIQCSKI 965
H+E V VGTGL+LCAQGC+AILDTGTSLITGP+EEI+AL AIGG P L G+Y IQCSK
Sbjct: 256 HMESVKVGTGLSLCAQGCSAILDTGTSLITGPSEEIRALNKAIGGYPFLNGQYFIQCSKT 315
Query: 966 PTLPPVSFHLGGVWFNLTAXDYVIQITRGGASLCLSGFQALDMPPPTGPLWILGDVFLGS 1145
PTLPPVSFHLGGVWFNLT DYVI+I + LCL GFQALD+P P GPLWILGDVFLG
Sbjct: 316 PTLPPVSFHLGGVWFNLTGQDYVIKILQSDVGLCLLGFQALDIPKPAGPLWILGDVFLGP 375
Query: 1146 YVAVFDRGDRKNDARVGLARARA 1214
YVAVFDRGD+ RVGLARA++
Sbjct: 376 YVAVFDRGDKNVGPRVGLARAQS 398
>ref|NP_034113.1| cathepsin D precursor [Mus musculus].
Length = 410
Score = 386 bits (991), Expect = e-107
Identities = 195/394 (49%), Positives = 263/394 (66%), Gaps = 19/394 (4%)
Frame = +3
Query: 84 LIRIPLRRVHAGLRTLNPLRAWEKSAEPPRLGAP------SPGDKTFVPLS----NYLNV 233
+IRIPLR+ + RT+ + S E L P KT P+S NYL+
Sbjct: 21 IIRIPLRKFTSIRRTMTEVGG---SVEDLILKGPITKYSMQSSPKTTEPVSELLKNYLDA 77
Query: 234 QYYGEIGLGTPPQNFSVIFDTGSSNLWVPSGRCHFLSLPCWLHHRYHSKASSSFHSNETK 413
QYYG+IG+GTPPQ F+V+FDTGSSNLWVPS C L + CW+HH+Y+S SS++ N T
Sbjct: 78 QYYGDIGIGTPPQCFTVVFDTGSSNLWVPSIHCKILDIACWVHHKYNSDKSSTYVKNGTS 137
Query: 414 FAIQYGTGRLNGILSEDKLTIG---------GLTGASVIFGEALWEPSLVFAFAHFDGIL 566
F I YG+G L+G LS+D +++ G+ IFGEA +P +VF A FDGIL
Sbjct: 138 FDIHYGSGSLSGYLSQDTVSVPCKSDQSKARGIKVEKQIFGEATKQPGIVFVAAKFDGIL 197
Query: 567 GLGFPVLAVGGVRPPLDSLVDQGLLDKPVFSFYLNRDPEAADGGELVLGGSDPAHYIPPL 746
G+G+P ++V V P D+L+ Q L+DK +FSFYLNRDPE GGEL+LGG+D +Y L
Sbjct: 198 GMGYPHISVNNVLPVFDNLMQQKLVDKNIFSFYLNRDPEGQPGGELMLGGTDSKYYHGEL 257
Query: 747 TFVPVTVPAYWQVHVERVHVGTGLTLCAQGCAAILDTGTSLITGPTEEIQALQAAIGGIP 926
+++ VT AYWQVH++++ VG LTLC GC AI+DTGTSL+ GP EE++ LQ AIG +P
Sbjct: 258 SYLNVTRKAYWQVHMDQLEVGNELTLCKGGCEAIVDTGTSLLVGPVEEVKELQKAIGAVP 317
Query: 927 LLMGEYLIQCSKIPTLPPVSFHLGGVWFNLTAXDYVIQITRGGASLCLSGFQALDMPPPT 1106
L+ GEY+I C K+ +LP V LGG + L Y++++++GG ++CLSGF +D+PPP+
Sbjct: 318 LIQGEYMIPCEKVSSLPTVYLKLGGKNYELHPDKYILKVSQGGKTICLSGFMGMDIPPPS 377
Query: 1107 GPLWILGDVFLGSYVAVFDRGDRKNDARVGLARA 1208
GPLWILGDVF+GSY VFDR ++ RVG A A
Sbjct: 378 GPLWILGDVFIGSYYTVFDR----DNNRVGFANA 407
>ref|NP_031825.2| cathepsin E preproprotein [Mus musculus].
Length = 397
Score = 331 bits (848), Expect = 8e-91
Identities = 164/333 (49%), Positives = 220/333 (66%)
Frame = +3
Query: 210 PLSNYLNVQYYGEIGLGTPPQNFSVIFDTGSSNLWVPSGRCHFLSLPCWLHHRYHSKASS 389
PL NYL+++Y+G I +GTPPQNF+VIFDTGSSNLWVPS C S C H +H S
Sbjct: 70 PLINYLDMEYFGTISIGTPPQNFTVIFDTGSSNLWVPSVYC--TSPACKAHPVFHPSQSD 127
Query: 390 SFHSNETKFAIQYGTGRLNGILSEDKLTIGGLTGASVIFGEALWEPSLVFAFAHFDGILG 569
++ F+IQYGTG L GI+ D++++ GLT FGE++ EP F A FDGILG
Sbjct: 128 TYTEVGNHFSIQYGTGSLTGIIGADQVSVEGLTVDGQQFGESVKEPGQTFVNAEFDGILG 187
Query: 570 LGFPVLAVGGVRPPLDSLVDQGLLDKPVFSFYLNRDPEAADGGELVLGGSDPAHYIPPLT 749
LG+P LA GGV P D+++ Q L+ P+FS YL+ DP+ G EL GG DP+H+ L
Sbjct: 188 LGYPSLAAGGVTPVFDNMMAQNLVALPMFSVYLSSDPQGGSGSELTFGGYDPSHFSGSLN 247
Query: 750 FVPVTVPAYWQVHVERVHVGTGLTLCAQGCAAILDTGTSLITGPTEEIQALQAAIGGIPL 929
++PVT AYWQ+ ++ + VG + C++GC AI+DTGTSLITGP ++I+ LQ AIG P
Sbjct: 248 WIPVTKQAYWQIALDGIQVGDTVMFCSEGCQAIVDTGTSLITGPPDKIKQLQEAIGATP- 306
Query: 930 LMGEYLIQCSKIPTLPPVSFHLGGVWFNLTAXDYVIQITRGGASLCLSGFQALDMPPPTG 1109
+ GEY + C+ + T+P V+F + V + L DY++ G C SGFQ LD+PPP G
Sbjct: 307 IDGEYAVDCATLDTMPNVTFLINEVSYTLNPTDYILPDLVEGMQFCGSGFQGLDIPPPAG 366
Query: 1110 PLWILGDVFLGSYVAVFDRGDRKNDARVGLARA 1208
PLWILGDVF+ + +VFDRG+ +VGLA A
Sbjct: 367 PLWILGDVFIRQFYSVFDRGNN----QVGLAPA 395
>ref|NP_112470.2| renin-2 [Mus musculus].
Length = 424
Score = 327 bits (839), Expect = 9e-90
Identities = 173/397 (43%), Positives = 236/397 (59%), Gaps = 14/397 (3%)
Frame = +3
Query: 63 SEPAGAMLIRIPLRRVHAGLRTLNPLRAWEKSAEPPRLGAP--------------SPGDK 200
S P G RIPL+++ + L E+ + RL A SP
Sbjct: 44 SLPTGTTFERIPLKKMPSVREILE-----ERGVDMTRLSAEWDVFTKRSSLTDLISP--- 95
Query: 201 TFVPLSNYLNVQYYGEIGLGTPPQNFSVIFDTGSSNLWVPSGRCHFLSLPCWLHHRYHSK 380
V L+NYLN QYYGEIG+GTPPQ F VIFDTGS+NLWVPS +C L L C +H Y S
Sbjct: 96 --VVLTNYLNSQYYGEIGIGTPPQTFKVIFDTGSANLWVPSTKCSRLYLACGIHSLYESS 153
Query: 381 ASSSFHSNETKFAIQYGTGRLNGILSEDKLTIGGLTGASVIFGEALWEPSLVFAFAHFDG 560
SSS+ N F I YG+GR+ G LS+D +T+GG+T + FGE P + F A FDG
Sbjct: 154 DSSSYMENGDDFTIHYGSGRVKGFLSQDSVTVGGIT-VTQTFGEVTELPLIPFMLAQFDG 212
Query: 561 ILGLGFPVLAVGGVRPPLDSLVDQGLLDKPVFSFYLNRDPEAADGGELVLGGSDPAHYIP 740
+LG+GFP AVGGV P D ++ QG+L + VFS Y NR P GGE+VLGGSDP HY
Sbjct: 213 VLGMGFPAQAVGGVTPVFDHILSQGVLKEKVFSVYYNRGPHLL-GGEVVLGGSDPEHYQG 271
Query: 741 PLTFVPVTVPAYWQVHVERVHVGTGLTLCAQGCAAILDTGTSLITGPTEEIQALQAAIGG 920
+V ++ WQ+ ++ V VG+ LC +GC ++DTG+S I+ PT ++ + A+G
Sbjct: 272 DFHYVSLSKTDSWQITMKGVSVGSSTLLCEEGCEVVVDTGSSFISAPTSSLKLIMQALGA 331
Query: 921 IPLLMGEYLIQCSKIPTLPPVSFHLGGVWFNLTAXDYVIQITRGGASLCLSGFQALDMPP 1100
+ EY++ CS++PTLP +SF+LGG + L++ DYV+Q LC A+D+PP
Sbjct: 332 KEKRLHEYVVSCSQVPTLPDISFNLGGRAYTLSSTDYVLQYPNRRDKLCTVALHAMDIPP 391
Query: 1101 PTGPLWILGDVFLGSYVAVFDRGDRKNDARVGLARAR 1211
PTGP+W+LG F+ + FDR ++ R+G A AR
Sbjct: 392 PTGPVWVLGATFIRKFYTEFDR----HNNRIGFALAR 424
>ref|NP_112469.1| renin-1 precursor [Mus musculus].
Length = 402
Score = 326 bits (835), Expect = 3e-89
Identities = 171/383 (44%), Positives = 235/383 (61%), Gaps = 9/383 (2%)
Frame = +3
Query: 90 RIPLRRVHAGLRTLNPLRAWEKSAEPPRLGA--------PSPGDKTF-VPLSNYLNVQYY 242
RIPL+++ + L E+ + RL A PS + T V L+NYLN QYY
Sbjct: 31 RIPLKKMPSVREILE-----ERGVDMTRLSAEWGVFTKRPSLTNLTSPVVLTNYLNTQYY 85
Query: 243 GEIGLGTPPQNFSVIFDTGSSNLWVPSGRCHFLSLPCWLHHRYHSKASSSFHSNETKFAI 422
GEIG+GTPPQ F VIFDTGS+NLWVPS +C L L C +H Y S SSS+ N + F I
Sbjct: 86 GEIGIGTPPQTFKVIFDTGSANLWVPSTKCSRLYLACGIHSLYESSDSSSYMENGSDFTI 145
Query: 423 QYGTGRLNGILSEDKLTIGGLTGASVIFGEALWEPSLVFAFAHFDGILGLGFPVLAVGGV 602
YG+GR+ G LS+D +T+GG+T + FGE P + F A FDG+LG+GFP AVGGV
Sbjct: 146 HYGSGRVKGFLSQDSVTVGGIT-VTQTFGEVTELPLIPFMLAKFDGVLGMGFPAQAVGGV 204
Query: 603 RPPLDSLVDQGLLDKPVFSFYLNRDPEAADGGELVLGGSDPAHYIPPLTFVPVTVPAYWQ 782
P D ++ QG+L + VFS Y NR GGE+VLGGSDP HY +V ++ WQ
Sbjct: 205 TPVFDHILSQGVLKEEVFSVYYNRGSHLL-GGEVVLGGSDPQHYQGNFHYVSISKTDSWQ 263
Query: 783 VHVERVHVGTGLTLCAQGCAAILDTGTSLITGPTEEIQALQAAIGGIPLLMGEYLIQCSK 962
+ ++ V VG+ LC +GCA ++DTG+S I+ PT ++ + A+G + EY++ CS+
Sbjct: 264 ITMKGVSVGSSTLLCEEGCAVVVDTGSSFISAPTSSLKLIMQALGAKEKRIEEYVVNCSQ 323
Query: 963 IPTLPPVSFHLGGVWFNLTAXDYVIQITRGGASLCLSGFQALDMPPPTGPLWILGDVFLG 1142
+PTLP +SF LGG + L++ DYV+Q LC A+D+PPPTGP+W+LG F+
Sbjct: 324 VPTLPDISFDLGGRAYTLSSTDYVLQYPNRRDKLCTLALHAMDIPPPTGPVWVLGATFIR 383
Query: 1143 SYVAVFDRGDRKNDARVGLARAR 1211
+ FDR ++ R+G A AR
Sbjct: 384 KFYTEFDR----HNNRIGFALAR 402
>ref|XP_001472682.1| PREDICTED: renin-1-like isoform 1 [Mus musculus].
Length = 425
Score = 324 bits (830), Expect = 1e-88
Identities = 159/335 (47%), Positives = 216/335 (64%)
Frame = +3
Query: 207 VPLSNYLNVQYYGEIGLGTPPQNFSVIFDTGSSNLWVPSGRCHFLSLPCWLHHRYHSKAS 386
V L+NYLN QYYGEIG+GTPPQ F VIFDTGS+NLWVPS +C L L C +H Y S S
Sbjct: 97 VVLTNYLNTQYYGEIGIGTPPQTFKVIFDTGSANLWVPSTKCSRLYLACGIHSLYESSDS 156
Query: 387 SSFHSNETKFAIQYGTGRLNGILSEDKLTIGGLTGASVIFGEALWEPSLVFAFAHFDGIL 566
SS+ N + F I YG+GR+ G LS+D +T+GG+T + FGE P + F A FDG+L
Sbjct: 157 SSYMENGSDFTIHYGSGRVKGFLSQDVVTVGGIT-VTQTFGEVTELPLIPFMLAKFDGVL 215
Query: 567 GLGFPVLAVGGVRPPLDSLVDQGLLDKPVFSFYLNRDPEAADGGELVLGGSDPAHYIPPL 746
G+GFP AVGGV P D ++ QG+L + VFS Y NR GGE+VLGGSDP HY
Sbjct: 216 GMGFPAQAVGGVTPVFDHILSQGVLKEEVFSVYYNRGSHLL-GGEVVLGGSDPQHYQGNF 274
Query: 747 TFVPVTVPAYWQVHVERVHVGTGLTLCAQGCAAILDTGTSLITGPTEEIQALQAAIGGIP 926
+V ++ WQ+ ++ V VG+ LC +GCA ++DTG+S I+ PT ++ + A+G
Sbjct: 275 HYVSISKTDSWQITMKGVSVGSSTLLCEEGCAVVVDTGSSFISAPTSSLKLIMQALGAKE 334
Query: 927 LLMGEYLIQCSKIPTLPPVSFHLGGVWFNLTAXDYVIQITRGGASLCLSGFQALDMPPPT 1106
+ EY++ CS++PTLP +SF LGG + L++ DYV+Q LC A+D+PPPT
Sbjct: 335 KRIDEYVVNCSQVPTLPDISFDLGGRAYTLSSTDYVLQYPYRRDKLCTLALHAMDIPPPT 394
Query: 1107 GPLWILGDVFLGSYVAVFDRGDRKNDARVGLARAR 1211
GP+W+LG F+ + FDR ++ R+G A AR
Sbjct: 395 GPVWVLGATFIRKFYTEFDR----HNNRIGFALAR 425
>ref|NP_080249.2| gastricsin precursor [Mus musculus].
Length = 392
Score = 249 bits (637), Expect = 2e-66
Identities = 146/389 (37%), Positives = 213/389 (54%), Gaps = 14/389 (3%)
Frame = +3
Query: 78 AMLIRIPLRRVHAGLRTLNPLRAWEKSAEPPRLGAPSPGDK-----------TFVPLSNY 224
A LIR+PL+++ + T+ + + + PG K + P++ Y
Sbjct: 16 AALIRVPLKKMKSIRETMKEQGVLKDFLKNHKY---DPGQKYHFGKFGDYSVLYEPMA-Y 71
Query: 225 LNVQYYGEIGLGTPPQNFSVIFDTGSSNLWVPSGRCHFLSLPCWLHHRYHSKASSSFHSN 404
++ YYGEI +GTPPQNF V+FDTGSSNLWV S C S C H RY+ SS++++
Sbjct: 72 MDASYYGEISIGTPPQNFLVLFDTGSSNLWVSSVYCQ--SEACTTHTRYNPSKSSTYYTQ 129
Query: 405 ETKFAIQYGTGRLNGILSEDKLTIGGLTGASVIFGEALWEPSLVFAFAHFDGILGLGFPV 584
F++QYGTG L G D L + + + FG + EP F +A FDGI+GL +P
Sbjct: 130 GQTFSLQYGTGSLTGFFGYDTLRVQSIQVPNQEFGLSENEPGTNFVYAQFDGIMGLAYPG 189
Query: 585 LAVGGVRPPLDSLVDQGLLDKPVFSFYLNRDPEAADGGELVLGGSDPAHYIPPLTFVPVT 764
L+ GG L ++ +G L +P+F YL + ++GG++V GG D Y LT++PVT
Sbjct: 190 LSSGGATTALQGMLGEGALSQPLFGVYLG-SQQGSNGGQIVFGGVDENLYTGELTWIPVT 248
Query: 765 VPAYWQVHVERVHVGTGLT--LCAQGCAAILDTGTSLITGPTEEIQALQAAIGGIPLLMG 938
YWQ+ ++ +G + + GC I+DTGTSL+ P + + L IG G
Sbjct: 249 QELYWQITIDDFLIGNQASGWCSSSGCQGIVDTGTSLLVMPAQYLNELLQTIGAQEGEYG 308
Query: 939 EYLIQCSKIPTLPPVSFHLGGVWFNLTAXDYVIQITRGGASLCLSGFQALDMPPPTG-PL 1115
+Y + C + +LP ++F L GV F L+ Y+IQ C+ G ++L + +G PL
Sbjct: 309 QYFVSCDSVSSLPTLTFVLNGVQFPLSPSSYIIQ----EEGSCMVGLESLSLNAESGQPL 364
Query: 1116 WILGDVFLGSYVAVFDRGDRKNDARVGLA 1202
WILGDVFL SY AVFD G+ RVGLA
Sbjct: 365 WILGDVFLRSYYAVFDMGNN----RVGLA 389
>ref|NP_067428.2| pepsinogen 5, group I [Mus musculus].
Length = 387
Score = 247 bits (631), Expect = 1e-65
Identities = 142/338 (42%), Positives = 200/338 (59%), Gaps = 2/338 (0%)
Frame = +3
Query: 201 TFVPLSNYLNVQYYGEIGLGTPPQNFSVIFDTGSSNLWVPSGRCHFLSLPCWLHHR-YHS 377
T+ P+ NYL++ Y G I +GTPPQ F V+ DTGSS LWVPS C S P HH+ ++
Sbjct: 62 TYEPMRNYLDLVYIGIISIGTPPQEFRVVLDTGSSVLWVPSIYC---SSPACAHHKAFNP 118
Query: 378 KASSSFHSNETKFAIQYGTGRLNGILSEDKLTIGGLTGASVIFGEALWEPSLVFAFAHFD 557
SS+F + + YG+G ++G L+ D + IG LT + FG +L EP + +A FD
Sbjct: 119 LRSSTFLVSGRPVNVAYGSGEMSGFLAYDTVRIGDLTVVAQAFGLSLEEPGIFMEYAVFD 178
Query: 558 GILGLGFPVLAVGGVRPPLDSLVDQGLLDKPVFSFYLNRDPEAADGGELVLGGSDPAHYI 737
GILGLG+P L + G+ P D+L QGL+ + +F+FYL+ E G L+LGG DP++Y
Sbjct: 179 GILGLGYPNLGLQGITPVFDNLWLQGLIPQNLFAFYLSSKDEK--GSMLMLGGVDPSYYH 236
Query: 738 PPLTFVPVTVPAYWQVHVERVHVGTGLTLCAQGCAAILDTGTSLITGPTEEIQALQAAIG 917
L +VPV+ P+YWQ+ V+ + + + C GC I+DTGTSL+TGP I +Q IG
Sbjct: 237 GELHWVPVSKPSYWQLAVDSISMNGEVIACDGGCQGIMDTGTSLLTGPRSSIVNIQNLIG 296
Query: 918 GIPLLMGEYLIQCSKIPTLPPVSFHLGGVWFNLTAXDYVIQITRGGASLCLSGFQALDMP 1097
GEY ++C I TLP + F +G V + + A Y I + + C S F+ M
Sbjct: 297 AKASGDGEYFLKCDTINTLPDIVFTIGSVTYPVPASAY---IRKDRSHNCRSNFEE-GMD 352
Query: 1098 PPTGP-LWILGDVFLGSYVAVFDRGDRKNDARVGLARA 1208
P+ P +W+LGDVFL Y VFDR + R+GLA A
Sbjct: 353 DPSDPEMWVLGDVFLRLYFTVFDRANN----RIGLAPA 386
>ref|NP_001104613.1| embryonic pepsinogen [Mus musculus].
Length = 379
Score = 234 bits (596), Expect = 1e-61
Identities = 129/333 (38%), Positives = 191/333 (57%)
Frame = +3
Query: 210 PLSNYLNVQYYGEIGLGTPPQNFSVIFDTGSSNLWVPSGRCHFLSLPCWLHHRYHSKASS 389
PL NYL+ +Y+G I +GTPPQ F+V+FDTGSS LWVPS C+ S C HHR+ S
Sbjct: 65 PLINYLDSEYFGTIYIGTPPQEFTVVFDTGSSELWVPSVYCN--SKVCRNHHRFDPSKSI 122
Query: 390 SFHSNETKFAIQYGTGRLNGILSEDKLTIGGLTGASVIFGEALWEPSLVFAFAHFDGILG 569
+F + +QYGTGR+ G L+ D +T+ + + G + EP +F ++ FDGILG
Sbjct: 123 TFQNLSKPLFVQYGTGRMEGFLAYDTVTVSDIVVSHQTVGLSTQEPGDIFTYSPFDGILG 182
Query: 570 LGFPVLAVGGVRPPLDSLVDQGLLDKPVFSFYLNRDPEAADGGELVLGGSDPAHYIPPLT 749
L +P A P D+++++ L+ + +FS Y++R+ + G L LG D +++I L
Sbjct: 183 LAYPTFASKYSVPIFDNMMNRHLVAQDLFSVYMSRNEQ---GSMLTLGAIDQSYFIGSLH 239
Query: 750 FVPVTVPAYWQVHVERVHVGTGLTLCAQGCAAILDTGTSLITGPTEEIQALQAAIGGIPL 929
+VPVTV YWQ V+R+ + + C GC A+LDTGT+L+TGP +I +Q IG +
Sbjct: 240 WVPVTVQGYWQFTVDRITINGEVVACQGGCPAVLDTGTALLTGPGRDILNIQQVIGAVQG 299
Query: 930 LMGEYLIQCSKIPTLPPVSFHLGGVWFNLTAXDYVIQITRGGASLCLSGFQALDMPPPTG 1109
++ I C ++ +P V F + G F L Y Q+ C SGF+
Sbjct: 300 HNDQFDIDCWRLDIMPTVVFEIHGREFPLPPYAYTNQV----QGFCSSGFK------QGS 349
Query: 1110 PLWILGDVFLGSYVAVFDRGDRKNDARVGLARA 1208
+WILGDVF+ + +VFDR + RVGLA+A
Sbjct: 350 HMWILGDVFIREFYSVFDRANN----RVGLAKA 378
>ref|NP_062390.3| beta-secretase 2 [Mus musculus].
Length = 514
Score = 88.2 bits (217), Expect = 1e-17
Identities = 74/245 (30%), Positives = 122/245 (49%), Gaps = 13/245 (5%)
Frame = +3
Query: 237 YYGEIGLGTPPQNFSVIFDTGSSNLWVPSGRCHFLSLPCWLHHRYHSKASSSFHSNETKF 416
YY E+ +GTPPQ ++ DTGSSN V +G H ++ + S++SS++HS
Sbjct: 88 YYLEMLIGTPPQKVQILVDTGSSNFAV-AGAPH-----SYIDTYFDSESSSTYHSKGFDV 141
Query: 417 AIQYGTGRLNGILSEDKLTI-GGLTGASVIFGEALWEPSLVF-AFAHFDGILGLGFPVLA 590
++Y G G + ED +TI G + ++ ++E F ++GILGL + LA
Sbjct: 142 TVKYTQGSWTGFVGEDLVTIPKGFNSSFLVNIATIFESENFFLPGIKWNGILGLAYAALA 201
Query: 591 --VGGVRPPLDSLVDQGLLDKPVFSFY-----LNRDPEAADGGELVLGGSDPAHYIPPLT 749
+ DSLV Q + +FS L +GG LVLGG +P+ Y +
Sbjct: 202 KPSSSLETFFDSLVAQAKI-PDIFSMQMCGAGLPVAGSGTNGGSLVLGGIEPSLYKGDIW 260
Query: 750 FVPVTVPAYWQVHVERVHV-GTGLTL-CAQGCA--AILDTGTSLITGPTEEIQALQAAIG 917
+ P+ Y+Q+ + ++ + G L L C + A AI+D+GT+L+ P + A+ A+
Sbjct: 261 YTPIKEEWYYQIEILKLEIGGQNLNLDCREYNADKAIVDSGTTLLRLPQKVFDAVVEAVA 320
Query: 918 GIPLL 932
L+
Sbjct: 321 RTSLI 325
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 46,999,811
Number of extensions: 1501110
Number of successful extensions: 7158
Number of sequences better than 1.0e-05: 12
Number of HSP's gapped: 7051
Number of HSP's successfully gapped: 12
Length of query: 408
Length of database: 15,617,559
Length adjustment: 104
Effective length of query: 304
Effective length of database: 12,493,815
Effective search space: 3798119760
Effective search space used: 3798119760
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-003661
(1224 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_003127411.1| PREDICTED: napsin-A [Sus scrofa]. 793 0.0
Alignment gi|NP_001032810.1| cathepsin D [Sus scrofa]. 374 e-104
Alignment gi|XP_003130146.2| PREDICTED: renin-like isoform 1 [Sus scrofa]. 318 4e-87
Alignment gi|XP_003357429.1| PREDICTED: renin-like isoform 2 [Sus scrofa]. 318 5e-87
Alignment gi|NP_999038.2| pepsin A preproprotein [Sus scrofa]. 279 3e-75
Alignment gi|XP_003128442.1| PREDICTED: gastricsin-like [Sus scrofa]. 257 1e-68
Alignment gi|XP_001927096.3| PREDICTED: chymosin [Sus scrofa]. 254 7e-68
Alignment gi|XP_003122706.1| PREDICTED: pregnancy-associated glycoprotein... 247 8e-66
Alignment gi|XP_003122707.1| PREDICTED: pregnancy-associated glycoprotein... 243 1e-64
Alignment gi|XP_003122705.2| PREDICTED: pregnancy-associated glycoprotein... 243 2e-64
>ref|XP_003127411.1| PREDICTED: napsin-A [Sus scrofa].
Length = 416
Score = 793 bits (2047), Expect = 0.0
Identities = 385/388 (99%), Positives = 386/388 (99%)
Frame = +3
Query: 60 TSEPAGAMLIRIPLRRVHAGLRTLNPLRAWEKSAEPPRLGAPSPGDKTFVPLSNYLNVQY 239
TSEPAGAMLIRIPLRRVHAGLRTLNPLRAWEKSAEPPRLGAPSPGDKTFVPLSNYLNVQY
Sbjct: 15 TSEPAGAMLIRIPLRRVHAGLRTLNPLRAWEKSAEPPRLGAPSPGDKTFVPLSNYLNVQY 74
Query: 240 YGEIGLGTPPQNFSVIFDTGSSNLWVPSGRCHFLSLPCWLHHRYHSKASSSFHSNETKFA 419
YGEIGLGTPPQNFSVIFDTGSSNLWVPSGRCHFLSLPCWLHHRYHSKASSSFHSNETKFA
Sbjct: 75 YGEIGLGTPPQNFSVIFDTGSSNLWVPSGRCHFLSLPCWLHHRYHSKASSSFHSNETKFA 134
Query: 420 IQYGTGRLNGILSEDKLTIGGLTGASVIFGEALWEPSLVFAFAHFDGILGLGFPVLAVGG 599
IQYGTGRLNGILSEDKLTIGGLTGASVIFGEALWEPSLVFAFAHFDGILGLGFPVLAVGG
Sbjct: 135 IQYGTGRLNGILSEDKLTIGGLTGASVIFGEALWEPSLVFAFAHFDGILGLGFPVLAVGG 194
Query: 600 VRPPLDSLVDQGLLDKPVFSFYLNRDPEAADGGELVLGGSDPAHYIPPLTFVPVTVPAYW 779
VRPPLDSLVDQGLLDKPVFSFYLNRDPEAADGGELVLGGSDPAHYIPPLTFVPVTVPAYW
Sbjct: 195 VRPPLDSLVDQGLLDKPVFSFYLNRDPEAADGGELVLGGSDPAHYIPPLTFVPVTVPAYW 254
Query: 780 QVHVERVHVGTGLTLCAQGCAAILDTGTSLITGPTEEIQALQAAIGGIPLLMGEYLIQCS 959
QVHVERVHVGTGLTLCAQGCAAILDTGTSLITGPTEEIQALQAAIGGIPLLMGEYLIQCS
Sbjct: 255 QVHVERVHVGTGLTLCAQGCAAILDTGTSLITGPTEEIQALQAAIGGIPLLMGEYLIQCS 314
Query: 960 KIPTLPPVSFHLGGVWFNLTAXDYVIQITRGGASLCLSGFQALDMPPPTGPLWILGDVFL 1139
KIPTLPPVSFHLGGVWFNLTA DYVIQITRGGASLCLSGFQALDMPPPTGPLWILGDVFL
Sbjct: 315 KIPTLPPVSFHLGGVWFNLTAQDYVIQITRGGASLCLSGFQALDMPPPTGPLWILGDVFL 374
Query: 1140 GSYVAVFDRGDRKNDARVGLARARAHGV 1223
GSYVAVFDRGDRK+DARVGLARARA GV
Sbjct: 375 GSYVAVFDRGDRKSDARVGLARARARGV 402
>ref|NP_001032810.1| cathepsin D [Sus scrofa].
Length = 410
Score = 374 bits (961), Expect = e-104
Identities = 193/393 (49%), Positives = 261/393 (66%), Gaps = 16/393 (4%)
Frame = +3
Query: 78 AMLIRIPLRRVHAGLRTLNPLRAWEKS--AEPPRL----GAPSPGDKTFVP-LSNYLNVQ 236
A LIRIPL + + RT++ + ++ A+ P L G P+ L NY++ Q
Sbjct: 19 AALIRIPLHKFTSIRRTMSEVGGPVENLIAKGPILKYSQGVPAVTQGPIPEVLKNYMDAQ 78
Query: 237 YYGEIGLGTPPQNFSVIFDTGSSNLWVPSGRCHFLSLPCWLHHRYHSKASSSFHSNETKF 416
YGEIG+GTPPQ F+V+FDTGSSNLWVPS C L + CW+HH+Y+S SS++ N T F
Sbjct: 79 NYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACWIHHKYNSGKSSTYVKNGTTF 138
Query: 417 AIQYGTGRLNGILSEDKLTI---------GGLTGASVIFGEALWEPSLVFAFAHFDGILG 569
AI YG+G L+G S+D +++ GG+ FGEA +P L F A FDGILG
Sbjct: 139 AIHYGSGSLSGYWSQDTVSVPCNSALLGVGGIKVERQTFGEATKQPGLTFIAAKFDGILG 198
Query: 570 LGFPVLAVGGVRPPLDSLVDQGLLDKPVFSFYLNRDPEAADGGELVLGGSDPAHYIPPLT 749
+ +P ++V V P D+L+ Q L+DK +FSFYLNRDP A GGEL+LGG D +Y L
Sbjct: 199 MAYPRISVNNVVPVFDNLMQQKLVDKNIFSFYLNRDPGAQPGGELMLGGIDSKYYKGSLD 258
Query: 750 FVPVTVPAYWQVHVERVHVGTGLTLCAQGCAAILDTGTSLITGPTEEIQALQAAIGGIPL 929
+ VT AYWQ+H+++V VG+ LTLC GC AI+DTGTSLI GP EE++ LQ AIG +PL
Sbjct: 259 YHNVTRKAYWQIHMDQVAVGSSLTLCKGGCEAIVDTGTSLIVGPVEEVRELQKAIGAVPL 318
Query: 930 LMGEYLIQCSKIPTLPPVSFHLGGVWFNLTAXDYVIQITRGGASLCLSGFQALDMPPPTG 1109
+ GEY+I C K+P+LP V+ LGG + L++ +Y +++++ G ++CLSGF +D+PPP G
Sbjct: 319 IQGEYMIPCEKVPSLPDVTVTLGGKKYKLSSENYTLKVSQAGQTICLSGFMGMDIPPPGG 378
Query: 1110 PLWILGDVFLGSYVAVFDRGDRKNDARVGLARA 1208
PLWILGDVF+G Y VFDR + RVGLA A
Sbjct: 379 PLWILGDVFIGRYYTVFDR----DLNRVGLAEA 407
>ref|XP_003130146.2| PREDICTED: renin-like isoform 1 [Sus scrofa].
Length = 398
Score = 318 bits (815), Expect = 4e-87
Identities = 165/363 (45%), Positives = 225/363 (61%), Gaps = 9/363 (2%)
Frame = +3
Query: 150 EKSAEPPRLGAP--------SPGDKTF-VPLSNYLNVQYYGEIGLGTPPQNFSVIFDTGS 302
E+ + RLGA S G++T V L+NYL+ QYYGEIG+GTPPQ F VIFDTGS
Sbjct: 42 ERGVDMARLGAEWSQFSKRLSFGNRTSPVVLTNYLDTQYYGEIGIGTPPQTFKVIFDTGS 101
Query: 303 SNLWVPSGRCHFLSLPCWLHHRYHSKASSSFHSNETKFAIQYGTGRLNGILSEDKLTIGG 482
+NLWVPS +C L C +H Y S SSS+ N T+F I YG+G++ G LS+D +T+GG
Sbjct: 102 ANLWVPSTKCSPLYTACEIHSLYDSSESSSYVENGTEFTIHYGSGKVKGFLSQDLVTVGG 161
Query: 483 LTGASVIFGEALWEPSLVFAFAHFDGILGLGFPVLAVGGVRPPLDSLVDQGLLDKPVFSF 662
T + FGE P + F A FDG+LG+GFP AVGGV P D ++ Q +L + VFS
Sbjct: 162 FT-VTQTFGEVTELPLIPFMLAKFDGVLGMGFPAQAVGGVTPVFDHILSQKVLKEDVFSV 220
Query: 663 YLNRDPEAADGGELVLGGSDPAHYIPPLTFVPVTVPAYWQVHVERVHVGTGLTLCAQGCA 842
Y +R+ + GGE+VLGGSDP +Y +V ++ WQ+ ++ V V + LC +GC
Sbjct: 221 YYSRNSQLL-GGEIVLGGSDPQYYQDSFHYVSISKTGSWQIKMKGVSVRSATLLCEEGCM 279
Query: 843 AILDTGTSLITGPTEEIQALQAAIGGIPLLMGEYLIQCSKIPTLPPVSFHLGGVWFNLTA 1022
++DTG S I+GPT ++ L +G L EY++ C+++PTLP +SFHLGG + LT+
Sbjct: 280 VVVDTGASYISGPTSSLRLLMETLGAKELSTDEYVVNCNQVPTLPDISFHLGGRAYTLTS 339
Query: 1023 XDYVIQITRGGASLCLSGFQALDMPPPTGPLWILGDVFLGSYVAVFDRGDRKNDARVGLA 1202
DYV+Q LC LD+PPPTGP+W+LG F+ + FDR R N R+G A
Sbjct: 340 ADYVLQDPYNNDDLCTLALHGLDVPPPTGPVWVLGASFIRKFYTEFDR--RNN--RIGFA 395
Query: 1203 RAR 1211
AR
Sbjct: 396 LAR 398
>ref|XP_003357429.1| PREDICTED: renin-like isoform 2 [Sus scrofa].
Length = 407
Score = 318 bits (814), Expect = 5e-87
Identities = 165/365 (45%), Positives = 226/365 (61%), Gaps = 11/365 (3%)
Frame = +3
Query: 150 EKSAEPPRLGAP--------SPGDKTF-VPLSNYLNVQYYGEIGLGTPPQNFSVIFDTGS 302
E+ + RLGA S G++T V L+NYL+ QYYGEIG+GTPPQ F VIFDTGS
Sbjct: 48 ERGVDMARLGAEWSQFSKRLSFGNRTSPVVLTNYLDTQYYGEIGIGTPPQTFKVIFDTGS 107
Query: 303 SNLWVPSGRCHFLSLPCWLHHRYHSKASSSFHSNETKFAIQYGTGRLNGILSEDKLTIGG 482
+NLWVPS +C L C +H Y S SSS+ N T+F I YG+G++ G LS+D +T+GG
Sbjct: 108 ANLWVPSTKCSPLYTACEIHSLYDSSESSSYVENGTEFTIHYGSGKVKGFLSQDLVTVGG 167
Query: 483 LTGASVIFGEALWEPSLVFAFAHFDGILGLGFPVLAVGGVRPPLDSLVDQGLLDKPVFSF 662
T + FGE P + F A FDG+LG+GFP AVGGV P D ++ Q +L + VFS
Sbjct: 168 FT-VTQTFGEVTELPLIPFMLAKFDGVLGMGFPAQAVGGVTPVFDHILSQKVLKEDVFSV 226
Query: 663 YLNRDPEAAD--GGELVLGGSDPAHYIPPLTFVPVTVPAYWQVHVERVHVGTGLTLCAQG 836
Y +R+ + + GGE+VLGGSDP +Y +V ++ WQ+ ++ V V + LC +G
Sbjct: 227 YYSRNSKNSQLLGGEIVLGGSDPQYYQDSFHYVSISKTGSWQIKMKGVSVRSATLLCEEG 286
Query: 837 CAAILDTGTSLITGPTEEIQALQAAIGGIPLLMGEYLIQCSKIPTLPPVSFHLGGVWFNL 1016
C ++DTG S I+GPT ++ L +G L EY++ C+++PTLP +SFHLGG + L
Sbjct: 287 CMVVVDTGASYISGPTSSLRLLMETLGAKELSTDEYVVNCNQVPTLPDISFHLGGRAYTL 346
Query: 1017 TAXDYVIQITRGGASLCLSGFQALDMPPPTGPLWILGDVFLGSYVAVFDRGDRKNDARVG 1196
T+ DYV+Q LC LD+PPPTGP+W+LG F+ + FDR R N R+G
Sbjct: 347 TSADYVLQDPYNNDDLCTLALHGLDVPPPTGPVWVLGASFIRKFYTEFDR--RNN--RIG 402
Query: 1197 LARAR 1211
A AR
Sbjct: 403 FALAR 407
>ref|NP_999038.2| pepsin A preproprotein [Sus scrofa].
Length = 385
Score = 279 bits (713), Expect = 3e-75
Identities = 145/331 (43%), Positives = 207/331 (62%)
Frame = +3
Query: 210 PLSNYLNVQYYGEIGLGTPPQNFSVIFDTGSSNLWVPSGRCHFLSLPCWLHHRYHSKASS 389
PL NYL+ +Y G IG+GTP Q+F+VIFDTGSSNLWVPS C SL C H++++ SS
Sbjct: 64 PLENYLDTEYLGTIGIGTPAQDFTVIFDTGSSNLWVPSVYCS--SLACSDHNQFNPDDSS 121
Query: 390 SFHSNETKFAIQYGTGRLNGILSEDKLTIGGLTGASVIFGEALWEPSLVFAFAHFDGILG 569
+F + + +I YGTG + GIL D + +GG++ + IFG + EP +A FDGILG
Sbjct: 122 TFEATSQELSITYGTGSMTGILGYDTVQVGGISDTNQIFGLSETEPGSSLYYAPFDGILG 181
Query: 570 LGFPVLAVGGVRPPLDSLVDQGLLDKPVFSFYLNRDPEAADGGELVLGGSDPAHYIPPLT 749
L +P ++ G P D+L DQGL+ + +FS YL+ + ++ G ++LGG D ++Y L
Sbjct: 182 LAYPSISASGATPVFDNLWDQGLVSQDLFSVYLSSNDDS--GSVVLLGGIDSSYYTGSLN 239
Query: 750 FVPVTVPAYWQVHVERVHVGTGLTLCAQGCAAILDTGTSLITGPTEEIQALQAAIGGIPL 929
+VPV+V YWQ+ ++ + + C+ GC AI+DTGTSL+TGPT I +Q+ IG
Sbjct: 240 WVPVSVEGYWQITLDSITMDGETIACSGGCQAIVDTGTSLLTGPTSAIANIQSDIGASEN 299
Query: 930 LMGEYLIQCSKIPTLPPVSFHLGGVWFNLTAXDYVIQITRGGASLCLSGFQALDMPPPTG 1109
GE +I CS I +LP + F + GV + L+ Y++Q C SGF+ +D+P +G
Sbjct: 300 SDGEMVISCSSIDSLPDIVFTINGVQYPLSPSAYILQ----DDDSCTSGFEGMDVPTSSG 355
Query: 1110 PLWILGDVFLGSYVAVFDRGDRKNDARVGLA 1202
LWILGDVF+ Y VFDR + K VGLA
Sbjct: 356 ELWILGDVFIRQYYTVFDRANNK----VGLA 382
>ref|XP_003128442.1| PREDICTED: gastricsin-like [Sus scrofa].
Length = 394
Score = 257 bits (656), Expect = 1e-68
Identities = 141/331 (42%), Positives = 190/331 (57%), Gaps = 2/331 (0%)
Frame = +3
Query: 222 YLNVQYYGEIGLGTPPQNFSVIFDTGSSNLWVPSGRCHFLSLPCWLHHRYHSKASSSFHS 401
YL Y+GEI +GTPPQNF V+FDTGSSNLWVPS C SL C H R++ SS++ +
Sbjct: 73 YLEAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCK--SLACTTHARFNPSKSSTYST 130
Query: 402 NETKFAIQYGTGRLNGILSEDKLTIGGLTGASVIFGEALWEPSLVFAFAHFDGILGLGFP 581
+ F++QYG+G L G D L I + FG + EP F +A FDGI+GL +P
Sbjct: 131 DRQTFSLQYGSGSLTGFFGYDTLKIQSIQVPDQEFGLSETEPGTSFLYAQFDGIMGLAYP 190
Query: 582 VLAVGGVRPPLDSLVDQGLLDKPVFSFYLNRDPEAADGGELVLGGSDPAHYIPPLTFVPV 761
L+ GG + L+ + L PVFSFYL+ + DGGELVLGG D + Y + + PV
Sbjct: 191 DLSAGGATTAMQGLLQEDALTSPVFSFYLSNQQSSQDGGELVLGGVDSSLYTGQIYWAPV 250
Query: 762 TVPAYWQVHVERVHVGTGLT-LCAQGCAAILDTGTSLITGPTEEIQALQAAIGGIPLLMG 938
T YWQ+ +E +G + C++GC AI+DTGTSL+T P + + L A G G
Sbjct: 251 TQELYWQIGIEEFLIGDEASGWCSEGCQAIVDTGTSLLTVPQDYLSDLVQATGAEENEYG 310
Query: 939 EYLIQCSKIPTLPPVSFHLGGVWFNLTAXDYVIQITRGGASLCLSGFQALDMPPPTG-PL 1115
E+L+ C I +LP +F + GV F L Y+++ C+ G + + G PL
Sbjct: 311 EFLVDCKDIQSLPTFTFIINGVEFPLPPSAYILE----EDGFCMVGVEPTYVSSQNGQPL 366
Query: 1116 WILGDVFLGSYVAVFDRGDRKNDARVGLARA 1208
WILGDVFL SY +VFD G+ RVG A A
Sbjct: 367 WILGDVFLRSYYSVFDLGNN----RVGFATA 393
>ref|XP_001927096.3| PREDICTED: chymosin [Sus scrofa].
Length = 401
Score = 254 bits (649), Expect = 7e-68
Identities = 149/379 (39%), Positives = 212/379 (55%), Gaps = 4/379 (1%)
Frame = +3
Query: 84 LIRIPLRRVHAGLRTLNPLRAWEK--SAEPPRLGAP--SPGDKTFVPLSNYLNVQYYGEI 251
L+R+PLR+ + + L E +P L + S G+ PL+NYL+ QY+G+I
Sbjct: 39 LLRVPLRKGKSLRKELKERGLLEDFLQKQPYALSSKYSSFGEVASEPLTNYLDTQYFGKI 98
Query: 252 GLGTPPQNFSVIFDTGSSNLWVPSGRCHFLSLPCWLHHRYHSKASSSFHSNETKFAIQYG 431
+GTPPQ F+V+FDTGSS LWVPS C S C HHR++ SS+F + + +IQYG
Sbjct: 99 YIGTPPQEFTVVFDTGSSELWVPSVYCK--SDACQNHHRFNPSKSSTFQNLDKPLSIQYG 156
Query: 432 TGRLNGILSEDKLTIGGLTGASVIFGEALWEPSLVFAFAHFDGILGLGFPVLAVGGVRPP 611
TG + G L D + + G+ A G + EPS +F ++ FDGILGLG+P LA P
Sbjct: 157 TGSIQGFLGYDTVMVAGIVDAHQTVGLSTQEPSDIFTYSEFDGILGLGYPELASEYTVPV 216
Query: 612 LDSLVDQGLLDKPVFSFYLNRDPEAADGGELVLGGSDPAHYIPPLTFVPVTVPAYWQVHV 791
D+++ + L+ + +F+ Y++R+ E G L LG DP++Y L +VPVT+ YWQ V
Sbjct: 217 FDNMMHRHLVAQDLFAVYMSRNDE---GSMLTLGAIDPSYYTGSLHWVPVTMQLYWQFTV 273
Query: 792 ERVHVGTGLTLCAQGCAAILDTGTSLITGPTEEIQALQAAIGGIPLLMGEYLIQCSKIPT 971
+ V + + C GC AILDTGTS++ GP+ +I +Q AIG GE+ I C + +
Sbjct: 274 DSVTINGVVVACNGGCQAILDTGTSMLAGPSSDILNIQMAIGATESQYGEFDIDCGSLSS 333
Query: 972 LPPVSFHLGGVWFNLTAXDYVIQITRGGASLCLSGFQALDMPPPTGPLWILGDVFLGSYV 1151
+P V F + G + L Y T C SGFQ WILG VF+ Y
Sbjct: 334 MPTVVFEISGRMYPLPPSAY----TNQDQGFCTSGFQG----DSKSQHWILGVVFIQEYY 385
Query: 1152 AVFDRGDRKNDARVGLARA 1208
+VFDR + RVGLA+A
Sbjct: 386 SVFDRANN----RVGLAKA 400
>ref|XP_003122706.1| PREDICTED: pregnancy-associated glycoprotein 2-like [Sus scrofa].
Length = 388
Score = 247 bits (631), Expect = 8e-66
Identities = 150/384 (39%), Positives = 213/384 (55%), Gaps = 9/384 (2%)
Frame = +3
Query: 84 LIRIPLRRVHAGLRTL-------NPLRAWEKSAEPPRLGAPSPGDKTFV--PLSNYLNVQ 236
L+ IPLR+V + L N L RL S K PL N+L++
Sbjct: 16 LVTIPLRKVKSIRENLRDKGLLKNFLEEHPHDLIQNRLAEESAPQKNISQQPLRNHLDMV 75
Query: 237 YYGEIGLGTPPQNFSVIFDTGSSNLWVPSGRCHFLSLPCWLHHRYHSKASSSFHSNETKF 416
Y G I +GTPPQ FSV+FDTGSS+ WVPS C S+ C +H+ S++F + F
Sbjct: 76 YVGNITIGTPPQQFSVVFDTGSSDTWVPSIYCQ--SMACVIHNTLDPFQSTTFKFSGKIF 133
Query: 417 AIQYGTGRLNGILSEDKLTIGGLTGASVIFGEALWEPSLVFAFAHFDGILGLGFPVLAVG 596
++ YG G + G + D + +G L + FG +L E +VF A FDG+LGLG+P LA+
Sbjct: 134 SLPYGAGTVTGFIGYDTIRVGDLIIKNQAFGISLAEDDMVFENAVFDGVLGLGYPSLALE 193
Query: 597 GVRPPLDSLVDQGLLDKPVFSFYLNRDPEAADGGELVLGGSDPAHYIPPLTFVPVTVPAY 776
G P D++++Q L+ +PVF+FYL+ + EA G ++ GG +Y L +VP++ Y
Sbjct: 194 GTTPIFDTIMNQSLISEPVFAFYLSTETEA--GSVVMFGGVLDCYYKGDLKWVPLSQTQY 251
Query: 777 WQVHVERVHVGTGLTLCAQGCAAILDTGTSLITGPTEEIQALQAAIGGIPLLMGEYLIQC 956
WQ+ ++R+ + C + C AILDTGTS +TGP ++ + I G L Y+I C
Sbjct: 252 WQIPLDRITIKPKFVACKRRCQAILDTGTSSLTGPRRQVYNIHKLIPGY-YLQDLYVIYC 310
Query: 957 SKIPTLPPVSFHLGGVWFNLTAXDYVIQITRGGASLCLSGFQALDMPPPTGPLWILGDVF 1136
+ TLP + F + GV + + A YV Q T GG +CLS F+ + P P+WILGDVF
Sbjct: 311 NASSTLPDIVFTIKGVDYPVPAQAYV-QKTLGG--ICLSAFKGIKGKPSGNPIWILGDVF 367
Query: 1137 LGSYVAVFDRGDRKNDARVGLARA 1208
L Y VFDRG R+GLA A
Sbjct: 368 LRLYFTVFDRGQN----RIGLAPA 387
>ref|XP_003122707.1| PREDICTED: pregnancy-associated glycoprotein 2-like [Sus scrofa].
Length = 388
Score = 243 bits (621), Expect = 1e-64
Identities = 137/332 (41%), Positives = 192/332 (57%)
Frame = +3
Query: 213 LSNYLNVQYYGEIGLGTPPQNFSVIFDTGSSNLWVPSGRCHFLSLPCWLHHRYHSKASSS 392
L NY ++ Y G I +GTPPQ FSV+FDTGS++LWVPS CH S+ C H+ + SS+
Sbjct: 68 LRNYFDMIYVGNITVGTPPQQFSVVFDTGSTDLWVPSVYCH--SMACVTHNIFDPFQSST 125
Query: 393 FHSNETKFAIQYGTGRLNGILSEDKLTIGGLTGASVIFGEALWEPSLVFAFAHFDGILGL 572
F + T ++YG+G ++G L D + IG L F WE S F A FDG+LGL
Sbjct: 126 FRFSATPIRLEYGSGMVSGFLGYDTVRIGRLIIMGQGFCITSWEESKTFEHAPFDGMLGL 185
Query: 573 GFPVLAVGGVRPPLDSLVDQGLLDKPVFSFYLNRDPEAADGGELVLGGSDPAHYIPPLTF 752
G+ L + GV P D++ +G LD+PVF+FYL+ E G ++ GG D +Y L +
Sbjct: 186 GYASLGIRGVTPVFDNIKRRGFLDQPVFAFYLSTKSE--QGSVVIFGGVDHRYYRGDLRW 243
Query: 753 VPVTVPAYWQVHVERVHVGTGLTLCAQGCAAILDTGTSLITGPTEEIQALQAAIGGIPLL 932
VP++ P YWQ+ ++R+ + C GC AI+DTGTSL+ GP +++ +Q IG
Sbjct: 244 VPLSKPHYWQIALDRISWRGYVIACKAGCQAIVDTGTSLLRGPNADVRNIQKLIGA-HYF 302
Query: 933 MGEYLIQCSKIPTLPPVSFHLGGVWFNLTAXDYVIQITRGGASLCLSGFQALDMPPPTGP 1112
EY+I+CS TLP + F + V + + A Y+ + T G +CLS F+ L
Sbjct: 303 HREYVIRCSAPDTLPDIVFTINNVQYPVPARAYIRKNTNG---ICLSNFKGLIGHFNREA 359
Query: 1113 LWILGDVFLGSYVAVFDRGDRKNDARVGLARA 1208
+WILGDVFL Y VFDRG R+GLA A
Sbjct: 360 IWILGDVFLRLYFTVFDRGQN----RIGLATA 387
>ref|XP_003122705.2| PREDICTED: pregnancy-associated glycoprotein 2-like [Sus scrofa].
Length = 388
Score = 243 bits (619), Expect = 2e-64
Identities = 151/384 (39%), Positives = 206/384 (53%), Gaps = 9/384 (2%)
Frame = +3
Query: 84 LIRIPLRRVHAGLRTL-------NPLRAWEKSAEPPRLGAPSPGDK--TFVPLSNYLNVQ 236
L+ IPLR+V + L N L RL S K T +PL NYL+V
Sbjct: 16 LVTIPLRKVKSIRENLREKGFLKNFLDEHPHDMIRSRLTENSAPQKKNTTLPLRNYLDVI 75
Query: 237 YYGEIGLGTPPQNFSVIFDTGSSNLWVPSGRCHFLSLPCWLHHRYHSKASSSFHSNETKF 416
Y G I +GTPPQ FSV+FDTGSS+ WVPS C S+ C H+ + S++F
Sbjct: 76 YVGNISIGTPPQQFSVVFDTGSSDTWVPSIYCQ--SMACVTHNTFDPFQSTTFRFPGFIV 133
Query: 417 AIQYGTGRLNGILSEDKLTIGGLTGASVIFGEALWEPSLVFAFAHFDGILGLGFPVLAVG 596
+QY TG + G L D + +G L F + E +VF A FDGI+GL FP +A+
Sbjct: 134 ELQYATGAVTGFLGYDTIQVGDLIIKDQAFAISQSEDDVVFENAAFDGIVGLSFPSMAIE 193
Query: 597 GVRPPLDSLVDQGLLDKPVFSFYLNRDPEAADGGELVLGGSDPAHYIPPLTFVPVTVPAY 776
G P DSL++Q L+ + VF+FYL+ + A +G ++ GG D +Y L +VP++ P Y
Sbjct: 194 GTTPIFDSLMNQSLIAQTVFAFYLSSN--AQEGSVVMFGGVDKKYYKGDLKWVPLSQPHY 251
Query: 777 WQVHVERVHVGTGLTLCAQGCAAILDTGTSLITGPTEEIQALQAAIGGIPLLMGEYLIQC 956
WQ+ ++++ + C GC ILDTGTSL+ GP ++ L + GI L YLIQC
Sbjct: 252 WQIPLDKITIRGSSAACKNGCQGILDTGTSLLMGPKNQVYKLHKRLPGI-YLRNVYLIQC 310
Query: 957 SKIPTLPPVSFHLGGVWFNLTAXDYVIQITRGGASLCLSGFQALDMPPPTGPLWILGDVF 1136
I +LP ++F + G + + A YV + G CLSG +A P WILGDVF
Sbjct: 311 QDINSLPDITFTINGTDYPVPARVYVQKSFNG---FCLSGLRARTDTFPPKTAWILGDVF 367
Query: 1137 LGSYVAVFDRGDRKNDARVGLARA 1208
L Y VFDRG R+GLA A
Sbjct: 368 LRMYFTVFDRGQN----RIGLAPA 387
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 36,129,038
Number of extensions: 1254045
Number of successful extensions: 6208
Number of sequences better than 1.0e-05: 26
Number of HSP's gapped: 6034
Number of HSP's successfully gapped: 27
Length of query: 408
Length of database: 11,343,932
Length adjustment: 101
Effective length of query: 307
Effective length of database: 8,829,335
Effective search space: 2710605845
Effective search space used: 2710605845
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-003661
(1224 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr06 398 e-108
Sscrofa_Chr02 70 3e-09
>Sscrofa_Chr06
|| Length = 157765593
Score = 398 bits (201), Expect = e-108
Identities = 201/201 (100%)
Strand = Plus / Minus
Query: 474 atcggaggactcacaggtgcatcggtgattttcggggaggccctgtgggagcccagcctg 533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 50989928 atcggaggactcacaggtgcatcggtgattttcggggaggccctgtgggagcccagcctg 50989869
Query: 534 gtcttcgcctttgcccactttgatgggatactgggcctcggtttccccgttctggccgtg 593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 50989868 gtcttcgcctttgcccactttgatgggatactgggcctcggtttccccgttctggccgtg 50989809
Query: 594 ggaggagttcggcccccgctggacagcctggtggaccaggggttactggataagcctgtc 653
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 50989808 ggaggagttcggcccccgctggacagcctggtggaccaggggttactggataagcctgtc 50989749
Query: 654 ttctccttctacctcaacagg 674
|||||||||||||||||||||
Sbjct: 50989748 ttctccttctacctcaacagg 50989728
Score = 398 bits (201), Expect = e-108
Identities = 201/201 (100%)
Strand = Plus / Minus
Query: 474 atcggaggactcacaggtgcatcggtgattttcggggaggccctgtgggagcccagcctg 533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51075007 atcggaggactcacaggtgcatcggtgattttcggggaggccctgtgggagcccagcctg 51074948
Query: 534 gtcttcgcctttgcccactttgatgggatactgggcctcggtttccccgttctggccgtg 593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51074947 gtcttcgcctttgcccactttgatgggatactgggcctcggtttccccgttctggccgtg 51074888
Query: 594 ggaggagttcggcccccgctggacagcctggtggaccaggggttactggataagcctgtc 653
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51074887 ggaggagttcggcccccgctggacagcctggtggaccaggggttactggataagcctgtc 51074828
Query: 654 ttctccttctacctcaacagg 674
|||||||||||||||||||||
Sbjct: 51074827 ttctccttctacctcaacagg 51074807
Score = 353 bits (178), Expect = 1e-94
Identities = 184/186 (98%)
Strand = Plus / Minus
Query: 1039 agattactcggggtggcgccagtctctgcttatccggcttccaggctctggacatgcctc 1098
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51070351 agattactcggggtggcgccagtctctgcttatccggcttccaggctctggacatgcctc 51070292
Query: 1099 cgcccacagggcccctctggatcctcggcgatgtcttcttgggtagctacgtggccgtct 1158
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51070291 cgcccacagggcccctctggatcctcggcgatgtcttcttgggtagctacgtggccgtct 51070232
Query: 1159 tcgaccgtggcgacagaaaaaacgatgcccgagttgggctggcgcgcgctcgagctcatg 1218
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 51070231 tcgaccgtggcgacagaaaaagcgatgcccgagttgggctggcgcgcgctcgagctcgtg 51070172
Query: 1219 gagtag 1224
||||||
Sbjct: 51070171 gagtag 51070166
Score = 289 bits (146), Expect = 2e-75
Identities = 146/146 (100%)
Strand = Plus / Minus
Query: 796 gagtacatgtgggcacagggctgactctttgtgcccagggctgtgctgccattctggaca 855
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 50988589 gagtacatgtgggcacagggctgactctttgtgcccagggctgtgctgccattctggaca 50988530
Query: 856 caggcacatctctcatcacaggacccactgaggagattcaagccctgcaggcagccattg 915
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 50988529 caggcacatctctcatcacaggacccactgaggagattcaagccctgcaggcagccattg 50988470
Query: 916 ggggcatccccctgctgatgggggag 941
||||||||||||||||||||||||||
Sbjct: 50988469 ggggcatccccctgctgatgggggag 50988444
Score = 289 bits (146), Expect = 2e-75
Identities = 146/146 (100%)
Strand = Plus / Minus
Query: 796 gagtacatgtgggcacagggctgactctttgtgcccagggctgtgctgccattctggaca 855
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51073668 gagtacatgtgggcacagggctgactctttgtgcccagggctgtgctgccattctggaca 51073609
Query: 856 caggcacatctctcatcacaggacccactgaggagattcaagccctgcaggcagccattg 915
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51073608 caggcacatctctcatcacaggacccactgaggagattcaagccctgcaggcagccattg 51073549
Query: 916 ggggcatccccctgctgatgggggag 941
||||||||||||||||||||||||||
Sbjct: 51073548 ggggcatccccctgctgatgggggag 51073523
Score = 281 bits (142), Expect = 4e-73
Identities = 142/142 (100%)
Strand = Plus / Minus
Query: 91 ggatcccccttcgcagagtccacgcgggactcaggaccctgaacccactgagggcatggg 150
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 50990904 ggatcccccttcgcagagtccacgcgggactcaggaccctgaacccactgagggcatggg 50990845
Query: 151 agaagtcagcagagccccccaggctgggggccccatccccgggggacaagacctttgtgc 210
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 50990844 agaagtcagcagagccccccaggctgggggccccatccccgggggacaagacctttgtgc 50990785
Query: 211 ctctctccaactacctgaacgt 232
||||||||||||||||||||||
Sbjct: 50990784 ctctctccaactacctgaacgt 50990763
Score = 281 bits (142), Expect = 4e-73
Identities = 142/142 (100%)
Strand = Plus / Minus
Query: 91 ggatcccccttcgcagagtccacgcgggactcaggaccctgaacccactgagggcatggg 150
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51075985 ggatcccccttcgcagagtccacgcgggactcaggaccctgaacccactgagggcatggg 51075926
Query: 151 agaagtcagcagagccccccaggctgggggccccatccccgggggacaagacctttgtgc 210
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51075925 agaagtcagcagagccccccaggctgggggccccatccccgggggacaagacctttgtgc 51075866
Query: 211 ctctctccaactacctgaacgt 232
||||||||||||||||||||||
Sbjct: 51075865 ctctctccaactacctgaacgt 51075844
Score = 250 bits (126), Expect = 2e-63
Identities = 126/126 (100%)
Strand = Plus / Minus
Query: 671 cagggaccccgaggcagctgatggaggagagctggtcctgggtggctcggacccggcaca 730
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 50988933 cagggaccccgaggcagctgatggaggagagctggtcctgggtggctcggacccggcaca 50988874
Query: 731 ctacatcccgcccctcaccttcgtgcccgtcacagtccctgcctactggcaggtccacgt 790
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 50988873 ctacatcccgcccctcaccttcgtgcccgtcacagtccctgcctactggcaggtccacgt 50988814
Query: 791 ggagcg 796
||||||
Sbjct: 50988813 ggagcg 50988808
Score = 250 bits (126), Expect = 2e-63
Identities = 126/126 (100%)
Strand = Plus / Minus
Query: 671 cagggaccccgaggcagctgatggaggagagctggtcctgggtggctcggacccggcaca 730
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51074012 cagggaccccgaggcagctgatggaggagagctggtcctgggtggctcggacccggcaca 51073953
Query: 731 ctacatcccgcccctcaccttcgtgcccgtcacagtccctgcctactggcaggtccacgt 790
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51073952 ctacatcccgcccctcaccttcgtgcccgtcacagtccctgcctactggcaggtccacgt 51073893
Query: 791 ggagcg 796
||||||
Sbjct: 51073892 ggagcg 51073887
Score = 248 bits (125), Expect = 6e-63
Identities = 125/125 (100%)
Strand = Plus / Minus
Query: 231 gtccagtattacggggaaattgggctgggaacgcccccacagaacttctccgtcatcttt 290
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51075764 gtccagtattacggggaaattgggctgggaacgcccccacagaacttctccgtcatcttt 51075705
Query: 291 gacaccggctcctccaacctctgggtcccgtctgggagatgccacttcctcagtctgccc 350
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51075704 gacaccggctcctccaacctctgggtcccgtctgggagatgccacttcctcagtctgccc 51075645
Query: 351 tgctg 355
|||||
Sbjct: 51075644 tgctg 51075640
Score = 232 bits (117), Expect = 4e-58
Identities = 124/125 (99%), Gaps = 1/125 (0%)
Strand = Plus / Minus
Query: 231 gtccagtattacggggaaattgggctgggaacgcccccacagaacttctccgtcatcttt 290
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 50990683 gtccagtattacggggaaattgggctgggaacgcccccacagaacttctccgtcatcttt 50990624
Query: 291 gacaccggctcctccaacctctgggtcccgtctgggagatgccacttcctcagtctgccc 350
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 50990623 gacaccggctcctcc-acctctgggtcccgtctgggagatgccacttcctcagtctgccc 50990565
Query: 351 tgctg 355
|||||
Sbjct: 50990564 tgctg 50990560
Score = 228 bits (115), Expect = 6e-57
Identities = 118/119 (99%)
Strand = Plus / Minus
Query: 355 ggctgcaccaccgctaccattccaaagcttccagctccttccactccaatgagaccaagt 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 50990370 ggctgcaccaccgctaccattccaaagcttccagctccttccactccaatgagaccaagt 50990311
Query: 415 ttgccattcaatacggaaccgggcgcctcaacggcatcctgagcgaggacaaactgacc 473
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 50990310 ttgccattcaatacggaaccgggcgcctcaatggcatcctgagcgaggacaaactgacc 50990252
Score = 228 bits (115), Expect = 6e-57
Identities = 118/119 (99%)
Strand = Plus / Minus
Query: 355 ggctgcaccaccgctaccattccaaagcttccagctccttccactccaatgagaccaagt 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51075449 ggctgcaccaccgctaccattccaaagcttccagctccttccactccaatgagaccaagt 51075390
Query: 415 ttgccattcaatacggaaccgggcgcctcaacggcatcctgagcgaggacaaactgacc 473
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 51075389 ttgccattcaatacggaaccgggcgcctcaatggcatcctgagcgaggacaaactgacc 51075331
Score = 153 bits (77), Expect = 3e-34
Identities = 93/101 (92%)
Strand = Plus / Minus
Query: 940 agtacctcatccagtgctcgaaaatcccaacgctgcccccagtctccttccaccttnnnn 999
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51070654 agtacctcatccagtgctcgaaaatcccaacgctgcccccagtctccttccaccttgggg 51070595
Query: 1000 nnntctggtttaacctcacggcccangactatgtcatccag 1040
|||||||||||||||||||||| |||||||||||||||
Sbjct: 51070594 gggtctggtttaacctcacggcccaggactatgtcatccag 51070554
Score = 65.9 bits (33), Expect = 5e-08
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 60 accagcgagcccgccggggccatgctgatccgg 92
|||||||||||||||||||||||||||||||||
Sbjct: 51079187 accagcgagcccgccggggccatgctgatccgg 51079155
>Sscrofa_Chr02
|| Length = 162569375
Score = 69.9 bits (35), Expect = 3e-09
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 274 acttctccgtcatctttgacaccggctcctccaacctctgggt 316
||||| ||||||||||||||||||||||||||||||| |||||
Sbjct: 9797499 acttcaccgtcatctttgacaccggctcctccaacctgtgggt 9797457
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 28,982,447
Number of extensions: 318
Number of successful extensions: 318
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 316
Number of HSP's successfully gapped: 16
Length of query: 1224
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1203
Effective length of database: 2,808,413,156
Effective search space: 3378521026668
Effective search space used: 3378521026668
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)