Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-003670
(979 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_002696022.1| PREDICTED: hypothetical protein [Bos taurus]. 85 1e-16
Alignment gi|XP_611326.3| PREDICTED: hypothetical protein [Bos taurus]. 85 1e-16
Alignment gi|NP_001094743.1| keratin associated protein 4-7 [Bos taurus]. 81 1e-15
Alignment gi|XP_002696028.1| PREDICTED: hypothetical protein [Bos taurus]. 81 1e-15
Alignment gi|XP_002696029.1| PREDICTED: hypothetical protein [Bos taurus]. 81 1e-15
Alignment gi|XP_002696026.1| PREDICTED: hypothetical protein isoform 2 [B... 81 1e-15
Alignment gi|XP_002696025.1| PREDICTED: hypothetical protein isoform 1 [B... 81 1e-15
Alignment gi|XP_002696024.1| PREDICTED: keratin associated protein 4-7-li... 81 1e-15
Alignment gi|XP_002696023.1| PREDICTED: keratin associated protein 4-7-li... 81 1e-15
Alignment gi|XP_001790469.2| PREDICTED: hypothetical protein isoform 1 [B... 81 1e-15
>ref|XP_002696022.1| PREDICTED: hypothetical protein [Bos taurus].
Length = 90
Score = 84.7 bits (208), Expect = 1e-16
Identities = 41/78 (52%), Positives = 45/78 (57%), Gaps = 24/78 (30%)
Frame = -2
Query: 345 EQEGWQHEDWQHGGLQQLEMQHLGRQQ------------------------VGWQHTDWQ 238
EQ GWQH DWQH GLQQLEMQ +G QQ VGWQHT WQ
Sbjct: 3 EQVGWQHTDWQHRGLQQLEMQQVGLQQLEPQLDPQQEGRQQLEMQQVGRGQVGWQHTGWQ 62
Query: 237 HWGLQPLEMQHLGRQQVD 184
HWGLQ LEMQ +G QQ++
Sbjct: 63 HWGLQQLEMQQVGLQQLE 80
Score = 54.3 bits (129), Expect = 2e-07
Identities = 22/30 (73%), Positives = 26/30 (86%)
Frame = -2
Query: 273 RQQVGWQHTDWQHWGLQPLEMQHLGRQQVD 184
R+QVGWQHTDWQH GLQ LEMQ +G QQ++
Sbjct: 2 REQVGWQHTDWQHRGLQQLEMQQVGLQQLE 31
>ref|XP_611326.3| PREDICTED: hypothetical protein [Bos taurus].
Length = 90
Score = 84.7 bits (208), Expect = 1e-16
Identities = 41/78 (52%), Positives = 45/78 (57%), Gaps = 24/78 (30%)
Frame = -2
Query: 345 EQEGWQHEDWQHGGLQQLEMQHLGRQQ------------------------VGWQHTDWQ 238
EQ GWQH DWQH GLQQLEMQ +G QQ VGWQHT WQ
Sbjct: 3 EQVGWQHTDWQHRGLQQLEMQQVGLQQLEPQLDPQQEGRQQLEMQQVGRGQVGWQHTGWQ 62
Query: 237 HWGLQPLEMQHLGRQQVD 184
HWGLQ LEMQ +G QQ++
Sbjct: 63 HWGLQQLEMQQVGLQQLE 80
Score = 54.3 bits (129), Expect = 2e-07
Identities = 22/30 (73%), Positives = 26/30 (86%)
Frame = -2
Query: 273 RQQVGWQHTDWQHWGLQPLEMQHLGRQQVD 184
R+QVGWQHTDWQH GLQ LEMQ +G QQ++
Sbjct: 2 REQVGWQHTDWQHRGLQQLEMQQVGLQQLE 31
>ref|NP_001094743.1| keratin associated protein 4-7 [Bos taurus].
Length = 209
Score = 81.3 bits (199), Expect = 1e-15
Identities = 32/35 (91%), Positives = 32/35 (91%)
Frame = +2
Query: 452 LRPVCGRVSCHTTCYRPICVISTCPRPTCCASSCC 556
LRPVCGRVSCHTTCYRP CVISTCPRP CC SSCC
Sbjct: 175 LRPVCGRVSCHTTCYRPTCVISTCPRPVCCPSSCC 209
Score = 53.9 bits (128), Expect = 2e-07
Identities = 25/55 (45%), Positives = 27/55 (49%)
Frame = +2
Query: 47 MVSSCCGSVCSDQGCGQDLXXXXXXXXXXXXXXXXXXXXXXXXXGVSTCCRPRCC 211
MVSSCCGSVCSDQ CG+ L GVS+CCRP CC
Sbjct: 1 MVSSCCGSVCSDQSCGRSLCQETCCQPSCCQTTCCRTTCCRPSCGVSSCCRPVCC 55
>ref|XP_002696028.1| PREDICTED: hypothetical protein [Bos taurus].
Length = 170
Score = 81.3 bits (199), Expect = 1e-15
Identities = 32/35 (91%), Positives = 32/35 (91%)
Frame = +2
Query: 452 LRPVCGRVSCHTTCYRPICVISTCPRPTCCASSCC 556
LRPVCGRVSCHTTCYRP CVISTCPRP CC SSCC
Sbjct: 136 LRPVCGRVSCHTTCYRPTCVISTCPRPVCCPSSCC 170
Score = 48.9 bits (115), Expect = 7e-06
Identities = 24/60 (40%), Positives = 28/60 (46%), Gaps = 5/60 (8%)
Frame = +2
Query: 47 MVSSCCGSVCSDQGCGQDLXXXXXXXXXXXXXXXXXXXXXXXXXGV-----STCCRPRCC 211
MVSSCCGS+CSDQ CG+ L GV S+CCRP+CC
Sbjct: 1 MVSSCCGSICSDQSCGRSLCQETCCRPSCCQTTCCRTTCCRPSCGVPTCCISSCCRPQCC 60
Score = 48.5 bits (114), Expect = 9e-06
Identities = 19/34 (55%), Positives = 22/34 (64%)
Frame = +2
Query: 455 RPVCGRVSCHTTCYRPICVISTCPRPTCCASSCC 556
RP C SC ++C RP C IS+C RP CC S CC
Sbjct: 81 RPSCCGSSCGSSCCRPTCCISSCCRPRCCQSVCC 114
>ref|XP_002696029.1| PREDICTED: hypothetical protein [Bos taurus].
Length = 209
Score = 81.3 bits (199), Expect = 1e-15
Identities = 32/35 (91%), Positives = 32/35 (91%)
Frame = +2
Query: 452 LRPVCGRVSCHTTCYRPICVISTCPRPTCCASSCC 556
LRPVCGRVSCHTTCYRP CVISTCPRP CC SSCC
Sbjct: 175 LRPVCGRVSCHTTCYRPTCVISTCPRPVCCPSSCC 209
Score = 49.3 bits (116), Expect = 5e-06
Identities = 25/60 (41%), Positives = 28/60 (46%), Gaps = 5/60 (8%)
Frame = +2
Query: 47 MVSSCCGSVCSDQGCGQDLXXXXXXXXXXXXXXXXXXXXXXXXXGV-----STCCRPRCC 211
MVSSCCGSVCSDQ CG+ L GV S+CCRP+CC
Sbjct: 1 MVSSCCGSVCSDQSCGRSLCQETCCPPSCCQTTCCRTTCCRPSCGVPTCCISSCCRPQCC 60
Score = 48.5 bits (114), Expect = 9e-06
Identities = 19/34 (55%), Positives = 22/34 (64%)
Frame = +2
Query: 455 RPVCGRVSCHTTCYRPICVISTCPRPTCCASSCC 556
RP C SC ++C RP C IS+C RP CC S CC
Sbjct: 120 RPSCCGSSCGSSCCRPTCCISSCCRPRCCQSVCC 153
>ref|XP_002696026.1| PREDICTED: hypothetical protein isoform 2 [Bos taurus].
Length = 205
Score = 81.3 bits (199), Expect = 1e-15
Identities = 32/35 (91%), Positives = 32/35 (91%)
Frame = +2
Query: 452 LRPVCGRVSCHTTCYRPICVISTCPRPTCCASSCC 556
LRPVCGRVSCHTTCYRP CVISTCPRP CC SSCC
Sbjct: 171 LRPVCGRVSCHTTCYRPTCVISTCPRPVCCPSSCC 205
Score = 53.1 bits (126), Expect = 4e-07
Identities = 21/34 (61%), Positives = 23/34 (67%)
Frame = +2
Query: 455 RPVCGRVSCHTTCYRPICVISTCPRPTCCASSCC 556
RP CG V C C +P+C TCPRPTCC SSCC
Sbjct: 41 RPSCG-VCCRPQCCQPVCCQPTCPRPTCCISSCC 73
Score = 48.5 bits (114), Expect = 9e-06
Identities = 24/55 (43%), Positives = 26/55 (47%)
Frame = +2
Query: 47 MVSSCCGSVCSDQGCGQDLXXXXXXXXXXXXXXXXXXXXXXXXXGVSTCCRPRCC 211
MVSSCCGSVCSDQ CG+ L GV CCRP+CC
Sbjct: 1 MVSSCCGSVCSDQSCGRSLCQETCCQPSCCQTTCCRTTCCRPSCGV--CCRPQCC 53
>ref|XP_002696025.1| PREDICTED: hypothetical protein isoform 1 [Bos taurus].
Length = 229
Score = 81.3 bits (199), Expect = 1e-15
Identities = 32/35 (91%), Positives = 32/35 (91%)
Frame = +2
Query: 452 LRPVCGRVSCHTTCYRPICVISTCPRPTCCASSCC 556
LRPVCGRVSCHTTCYRP CVISTCPRP CC SSCC
Sbjct: 195 LRPVCGRVSCHTTCYRPTCVISTCPRPVCCPSSCC 229
Score = 49.3 bits (116), Expect = 5e-06
Identities = 25/60 (41%), Positives = 28/60 (46%), Gaps = 5/60 (8%)
Frame = +2
Query: 47 MVSSCCGSVCSDQGCGQDLXXXXXXXXXXXXXXXXXXXXXXXXXGV-----STCCRPRCC 211
MVSSCCGSVCSDQ CG+ L GV S+CCRP+CC
Sbjct: 1 MVSSCCGSVCSDQSCGRSLCQETCCQPSCCQTTCCRTTCCRPSCGVPTCCISSCCRPQCC 60
Score = 48.5 bits (114), Expect = 9e-06
Identities = 20/40 (50%), Positives = 23/40 (57%), Gaps = 6/40 (15%)
Frame = +2
Query: 455 RPVCGRVSC------HTTCYRPICVISTCPRPTCCASSCC 556
RP CG +C C +P+C TCPRPTCC SSCC
Sbjct: 41 RPSCGVPTCCISSCCRPQCCQPVCCQPTCPRPTCCISSCC 80
>ref|XP_002696024.1| PREDICTED: keratin associated protein 4-7-like [Bos taurus].
Length = 209
Score = 81.3 bits (199), Expect = 1e-15
Identities = 32/35 (91%), Positives = 32/35 (91%)
Frame = +2
Query: 452 LRPVCGRVSCHTTCYRPICVISTCPRPTCCASSCC 556
LRPVCGRVSCHTTCYRP CVISTCPRP CC SSCC
Sbjct: 175 LRPVCGRVSCHTTCYRPTCVISTCPRPVCCPSSCC 209
Score = 53.9 bits (128), Expect = 2e-07
Identities = 25/55 (45%), Positives = 27/55 (49%)
Frame = +2
Query: 47 MVSSCCGSVCSDQGCGQDLXXXXXXXXXXXXXXXXXXXXXXXXXGVSTCCRPRCC 211
MVSSCCGSVCSDQ CG+ L GVS+CCRP CC
Sbjct: 1 MVSSCCGSVCSDQSCGRSLCQETCCQPSCCRTTCCRTTCCRPSCGVSSCCRPVCC 55
>ref|XP_002696023.1| PREDICTED: keratin associated protein 4-7-like [Bos taurus].
Length = 205
Score = 81.3 bits (199), Expect = 1e-15
Identities = 32/35 (91%), Positives = 32/35 (91%)
Frame = +2
Query: 452 LRPVCGRVSCHTTCYRPICVISTCPRPTCCASSCC 556
LRPVCGRVSCHTTCYRP CVISTCPRP CC SSCC
Sbjct: 171 LRPVCGRVSCHTTCYRPTCVISTCPRPVCCPSSCC 205
Score = 53.9 bits (128), Expect = 2e-07
Identities = 25/55 (45%), Positives = 27/55 (49%)
Frame = +2
Query: 47 MVSSCCGSVCSDQGCGQDLXXXXXXXXXXXXXXXXXXXXXXXXXGVSTCCRPRCC 211
MVSSCCGSVCSDQ CG+ L GVS+CCRP CC
Sbjct: 1 MVSSCCGSVCSDQSCGRSLCQETCCQPSCCRTTCCRTTCCRPSCGVSSCCRPVCC 55
>ref|XP_001790469.2| PREDICTED: hypothetical protein isoform 1 [Bos taurus].
Length = 205
Score = 81.3 bits (199), Expect = 1e-15
Identities = 32/35 (91%), Positives = 32/35 (91%)
Frame = +2
Query: 452 LRPVCGRVSCHTTCYRPICVISTCPRPTCCASSCC 556
LRPVCGRVSCHTTCYRP CVISTCPRP CC SSCC
Sbjct: 171 LRPVCGRVSCHTTCYRPTCVISTCPRPVCCPSSCC 205
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 30,418,608
Number of extensions: 870749
Number of successful extensions: 6355
Number of sequences better than 1.0e-05: 23
Number of HSP's gapped: 5533
Number of HSP's successfully gapped: 69
Length of query: 326
Length of database: 17,681,374
Length adjustment: 102
Effective length of query: 224
Effective length of database: 14,306,398
Effective search space: 3204633152
Effective search space used: 3204633152
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-003670
(979 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_549793.2| PREDICTED: similar to keratin associated protei... 83 5e-16
Alignment gi|XP_862509.1| PREDICTED: similar to keratin associated protei... 83 5e-16
Alignment gi|XP_850844.1| PREDICTED: similar to keratin associated protei... 83 5e-16
Alignment gi|XP_549791.2| PREDICTED: similar to keratin associated protei... 83 5e-16
Alignment gi|XP_850824.1| PREDICTED: similar to keratin associated protei... 83 5e-16
Alignment gi|XP_868353.1| PREDICTED: hypothetical protein XP_863260 [Cani... 49 9e-06
>ref|XP_549793.2| PREDICTED: similar to keratin associated protein 4-12 isoform 1
[Canis familiaris].
Length = 210
Score = 82.8 bits (203), Expect = 5e-16
Identities = 33/35 (94%), Positives = 33/35 (94%)
Frame = +2
Query: 452 LRPVCGRVSCHTTCYRPICVISTCPRPTCCASSCC 556
LRPVCGRVSCHTTCYRP CVISTCPRP CCASSCC
Sbjct: 176 LRPVCGRVSCHTTCYRPTCVISTCPRPMCCASSCC 210
Score = 49.7 bits (117), Expect = 4e-06
Identities = 25/58 (43%), Positives = 28/58 (48%)
Frame = +2
Query: 47 MVSSCCGSVCSDQGCGQDLXXXXXXXXXXXXXXXXXXXXXXXXXGVSTCCRPRCCISS 220
MV+SCCGSVCSDQ CGQ+ S+CCRP CCISS
Sbjct: 1 MVNSCCGSVCSDQSCGQETCCRPTCCGSSGCG--------------SSCCRPSCCISS 44
>ref|XP_862509.1| PREDICTED: similar to keratin associated protein 4-12 isoform 3
[Canis familiaris].
Length = 218
Score = 82.8 bits (203), Expect = 5e-16
Identities = 33/35 (94%), Positives = 33/35 (94%)
Frame = +2
Query: 452 LRPVCGRVSCHTTCYRPICVISTCPRPTCCASSCC 556
LRPVCGRVSCHTTCYRP CVISTCPRP CCASSCC
Sbjct: 184 LRPVCGRVSCHTTCYRPTCVISTCPRPMCCASSCC 218
Score = 49.7 bits (117), Expect = 4e-06
Identities = 25/58 (43%), Positives = 28/58 (48%)
Frame = +2
Query: 47 MVSSCCGSVCSDQGCGQDLXXXXXXXXXXXXXXXXXXXXXXXXXGVSTCCRPRCCISS 220
MV+SCCGSVCSDQ CGQ+ S+CCRP CCISS
Sbjct: 1 MVNSCCGSVCSDQSCGQETCCRPTCCGSSGCG--------------SSCCRPSCCISS 44
>ref|XP_850844.1| PREDICTED: similar to keratin associated protein 4-12 isoform 2
[Canis familiaris].
Length = 218
Score = 82.8 bits (203), Expect = 5e-16
Identities = 33/35 (94%), Positives = 33/35 (94%)
Frame = +2
Query: 452 LRPVCGRVSCHTTCYRPICVISTCPRPTCCASSCC 556
LRPVCGRVSCHTTCYRP CVISTCPRP CCASSCC
Sbjct: 184 LRPVCGRVSCHTTCYRPTCVISTCPRPMCCASSCC 218
Score = 49.7 bits (117), Expect = 4e-06
Identities = 25/58 (43%), Positives = 28/58 (48%)
Frame = +2
Query: 47 MVSSCCGSVCSDQGCGQDLXXXXXXXXXXXXXXXXXXXXXXXXXGVSTCCRPRCCISS 220
MV+SCCGSVCSDQ CGQ+ S+CCRP CCISS
Sbjct: 1 MVNSCCGSVCSDQSCGQETCCRPTCCGSSGCG--------------SSCCRPSCCISS 44
Score = 48.5 bits (114), Expect = 9e-06
Identities = 19/35 (54%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = +2
Query: 455 RPVCGRVSC-HTTCYRPICVISTCPRPTCCASSCC 556
RP C + +C TTC RP C +S+C RP+C +SSCC
Sbjct: 85 RPTCCQTTCCRTTCCRPSCCVSSCCRPSCSSSSCC 119
>ref|XP_549791.2| PREDICTED: similar to keratin associated protein 4-12 isoform 1
[Canis familiaris].
Length = 211
Score = 82.8 bits (203), Expect = 5e-16
Identities = 33/35 (94%), Positives = 33/35 (94%)
Frame = +2
Query: 452 LRPVCGRVSCHTTCYRPICVISTCPRPTCCASSCC 556
LRPVCGRVSCHTTCYRP CVISTCPRP CCASSCC
Sbjct: 177 LRPVCGRVSCHTTCYRPTCVISTCPRPMCCASSCC 211
Score = 50.1 bits (118), Expect = 3e-06
Identities = 23/58 (39%), Positives = 29/58 (50%)
Frame = +2
Query: 47 MVSSCCGSVCSDQGCGQDLXXXXXXXXXXXXXXXXXXXXXXXXXGVSTCCRPRCCISS 220
MV+SCCGS+CS+QGCGQ+ +TCCRP CC+SS
Sbjct: 1 MVNSCCGSICSEQGCGQETCCRPTCCQTTCCR--------------TTCCRPSCCVSS 44
>ref|XP_850824.1| PREDICTED: similar to keratin associated protein 4-12 isoform 2
[Canis familiaris].
Length = 191
Score = 82.8 bits (203), Expect = 5e-16
Identities = 33/35 (94%), Positives = 33/35 (94%)
Frame = +2
Query: 452 LRPVCGRVSCHTTCYRPICVISTCPRPTCCASSCC 556
LRPVCGRVSCHTTCYRP CVISTCPRP CCASSCC
Sbjct: 157 LRPVCGRVSCHTTCYRPTCVISTCPRPMCCASSCC 191
>ref|XP_868353.1| PREDICTED: hypothetical protein XP_863260 [Canis familiaris].
Length = 228
Score = 48.5 bits (114), Expect = 9e-06
Identities = 27/63 (42%), Positives = 35/63 (55%), Gaps = 7/63 (11%)
Frame = -2
Query: 345 EQEGWQHEDWQHGGLQQLEMQHLG-RQQVGW-----QHTDWQHWGLQPLEMQHLG-RQQV 187
EQ+G Q +DW+ GLQQ + Q G +QQ+ W Q DW+ GLQ L+ Q G Q
Sbjct: 61 EQQGLQQQDWEQQGLQQQDSQQQGLQQQLDWEQQGLQQQDWEQQGLQQLDSQQQGLTQSP 120
Query: 186 DTP 178
D P
Sbjct: 121 DAP 123
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 31,250,785
Number of extensions: 800887
Number of successful extensions: 4295
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 4045
Number of HSP's successfully gapped: 17
Length of query: 326
Length of database: 18,874,504
Length adjustment: 103
Effective length of query: 223
Effective length of database: 15,440,896
Effective search space: 3443319808
Effective search space used: 3443319808
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-003670
(979 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_001714764.2| PREDICTED: keratin-associated protein 4-8-li... 83 3e-16
Alignment gi|NP_114166.1| keratin-associated protein 4-8 [Homo sapiens]. 83 3e-16
Alignment gi|NP_112238.1| keratin-associated protein 4-6 [Homo sapiens]. 83 4e-16
Alignment gi|NP_149050.3| putative keratin-associated protein 4-X [Homo s... 83 4e-16
Alignment gi|NP_114060.1| keratin-associated protein 4-12 [Homo sapiens]. 83 4e-16
Alignment gi|NP_149445.3| keratin-associated protein 4-5 [Homo sapiens]. 82 1e-15
Alignment gi|NP_149048.2| keratin-associated protein 4-11 [Homo sapiens]. 81 1e-15
Alignment gi|NP_001139513.1| keratin-associated protein 4-9 [Homo sapiens]. 80 3e-15
Alignment gi|NP_149443.1| keratin-associated protein 4-3 [Homo sapiens]. 57 3e-08
Alignment gi|NP_149051.1| keratin-associated protein 4-2 [Homo sapiens]. 56 4e-08
>ref|XP_001714764.2| PREDICTED: keratin-associated protein 4-8-like isoform 1 [Homo
sapiens].
Length = 220
Score = 83.2 bits (204), Expect = 3e-16
Identities = 33/35 (94%), Positives = 33/35 (94%)
Frame = +2
Query: 452 LRPVCGRVSCHTTCYRPICVISTCPRPTCCASSCC 556
LRPVCGRVSCHTTCYRP CVISTCPRP CCASSCC
Sbjct: 186 LRPVCGRVSCHTTCYRPTCVISTCPRPVCCASSCC 220
Score = 57.8 bits (138), Expect = 2e-08
Identities = 27/57 (47%), Positives = 29/57 (50%)
Frame = +2
Query: 47 MVSSCCGSVCSDQGCGQDLXXXXXXXXXXXXXXXXXXXXXXXXXGVSTCCRPRCCIS 217
MV+SCCGSVCSDQGCGQDL VS CCRP+CC S
Sbjct: 1 MVNSCCGSVCSDQGCGQDLCQETCCCPSCCQTTCCRTTCYRPSYSVSCCCRPQCCQS 57
Score = 48.5 bits (114), Expect = 9e-06
Identities = 18/31 (58%), Positives = 20/31 (64%)
Frame = +2
Query: 464 CGRVSCHTTCYRPICVISTCPRPTCCASSCC 556
C V C TC P C IS+C RP+CC SSCC
Sbjct: 80 CQSVCCQPTCCHPSCCISSCCRPSCCVSSCC 110
>ref|NP_114166.1| keratin-associated protein 4-8 [Homo sapiens].
Length = 185
Score = 83.2 bits (204), Expect = 3e-16
Identities = 33/35 (94%), Positives = 33/35 (94%)
Frame = +2
Query: 452 LRPVCGRVSCHTTCYRPICVISTCPRPTCCASSCC 556
LRPVCGRVSCHTTCYRP CVISTCPRP CCASSCC
Sbjct: 151 LRPVCGRVSCHTTCYRPACVISTCPRPVCCASSCC 185
Score = 57.8 bits (138), Expect = 2e-08
Identities = 27/57 (47%), Positives = 29/57 (50%)
Frame = +2
Query: 47 MVSSCCGSVCSDQGCGQDLXXXXXXXXXXXXXXXXXXXXXXXXXGVSTCCRPRCCIS 217
MV+SCCGSVCSDQGCGQDL VS CCRP+CC S
Sbjct: 1 MVNSCCGSVCSDQGCGQDLCQETCCCPSCCQTTCCRTTCYRPSYSVSCCCRPQCCQS 57
Score = 48.5 bits (114), Expect = 9e-06
Identities = 18/31 (58%), Positives = 20/31 (64%)
Frame = +2
Query: 464 CGRVSCHTTCYRPICVISTCPRPTCCASSCC 556
C V C TC P C IS+C RP+CC SSCC
Sbjct: 80 CQSVCCQPTCCHPSCCISSCCRPSCCVSSCC 110
>ref|NP_112238.1| keratin-associated protein 4-6 [Homo sapiens].
Length = 205
Score = 82.8 bits (203), Expect = 4e-16
Identities = 33/35 (94%), Positives = 33/35 (94%)
Frame = +2
Query: 452 LRPVCGRVSCHTTCYRPICVISTCPRPTCCASSCC 556
LRPVCGRVSCHTTCYRP CVISTCPRP CCASSCC
Sbjct: 171 LRPVCGRVSCHTTCYRPTCVISTCPRPLCCASSCC 205
Score = 50.4 bits (119), Expect = 2e-06
Identities = 25/58 (43%), Positives = 28/58 (48%)
Frame = +2
Query: 47 MVSSCCGSVCSDQGCGQDLXXXXXXXXXXXXXXXXXXXXXXXXXGVSTCCRPRCCISS 220
MVSSCCGSVCSDQGCG + +TCCRP CC+SS
Sbjct: 1 MVSSCCGSVCSDQGCGLETCCRPSCCQTTCCR--------------TTCCRPSCCVSS 44
Score = 50.1 bits (118), Expect = 3e-06
Identities = 19/31 (61%), Positives = 21/31 (67%)
Frame = +2
Query: 464 CGRVSCHTTCYRPICVISTCPRPTCCASSCC 556
C V C TC RP C IS+C RP+CC SSCC
Sbjct: 130 CQSVCCQPTCCRPSCCISSCCRPSCCESSCC 160
>ref|NP_149050.3| putative keratin-associated protein 4-X [Homo sapiens].
Length = 155
Score = 82.8 bits (203), Expect = 4e-16
Identities = 33/35 (94%), Positives = 33/35 (94%)
Frame = +2
Query: 452 LRPVCGRVSCHTTCYRPICVISTCPRPTCCASSCC 556
LRPVCGRVSCHTTCYRP CVISTCPRP CCASSCC
Sbjct: 121 LRPVCGRVSCHTTCYRPTCVISTCPRPLCCASSCC 155
Score = 56.2 bits (134), Expect = 4e-08
Identities = 27/57 (47%), Positives = 29/57 (50%)
Frame = +2
Query: 47 MVSSCCGSVCSDQGCGQDLXXXXXXXXXXXXXXXXXXXXXXXXXGVSTCCRPRCCIS 217
MVSSCCGSVCSDQGC QDL VS+CCRP+CC S
Sbjct: 1 MVSSCCGSVCSDQGCSQDLCQETCCRPSCCQTTCCRTTCYRPSCCVSSCCRPQCCQS 57
Score = 51.2 bits (121), Expect = 1e-06
Identities = 20/35 (57%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Frame = +2
Query: 455 RPVCGRVSC-HTTCYRPICVISTCPRPTCCASSCC 556
RP C + +C TTCYRP C +S+C RP CC S CC
Sbjct: 26 RPSCCQTTCCRTTCYRPSCCVSSCCRPQCCQSVCC 60
Score = 48.9 bits (115), Expect = 7e-06
Identities = 20/34 (58%), Positives = 22/34 (64%)
Frame = +2
Query: 455 RPVCGRVSCHTTCYRPICVISTCPRPTCCASSCC 556
RP C C TTC P C IS+C RP+CC SSCC
Sbjct: 66 RPTC----CETTCCHPRCCISSCCRPSCCMSSCC 95
>ref|NP_114060.1| keratin-associated protein 4-12 [Homo sapiens].
Length = 201
Score = 82.8 bits (203), Expect = 4e-16
Identities = 33/35 (94%), Positives = 33/35 (94%)
Frame = +2
Query: 452 LRPVCGRVSCHTTCYRPICVISTCPRPTCCASSCC 556
LRPVCGRVSCHTTCYRP CVISTCPRP CCASSCC
Sbjct: 167 LRPVCGRVSCHTTCYRPTCVISTCPRPLCCASSCC 201
Score = 48.5 bits (114), Expect = 9e-06
Identities = 24/58 (41%), Positives = 28/58 (48%)
Frame = +2
Query: 47 MVSSCCGSVCSDQGCGQDLXXXXXXXXXXXXXXXXXXXXXXXXXGVSTCCRPRCCISS 220
MV+SCCGSVCSDQGCG + +TCCRP CC+SS
Sbjct: 1 MVNSCCGSVCSDQGCGLENCCRPSCCQTTCCR--------------TTCCRPSCCVSS 44
>ref|NP_149445.3| keratin-associated protein 4-5 [Homo sapiens].
Length = 181
Score = 81.6 bits (200), Expect = 1e-15
Identities = 32/35 (91%), Positives = 33/35 (94%)
Frame = +2
Query: 452 LRPVCGRVSCHTTCYRPICVISTCPRPTCCASSCC 556
+RPVCGRVSCHTTCYRP CVISTCPRP CCASSCC
Sbjct: 147 VRPVCGRVSCHTTCYRPTCVISTCPRPLCCASSCC 181
>ref|NP_149048.2| keratin-associated protein 4-11 [Homo sapiens].
Length = 195
Score = 81.3 bits (199), Expect = 1e-15
Identities = 32/35 (91%), Positives = 33/35 (94%)
Frame = +2
Query: 452 LRPVCGRVSCHTTCYRPICVISTCPRPTCCASSCC 556
LRPVCGRVSCHTTCYRP CVIS+CPRP CCASSCC
Sbjct: 161 LRPVCGRVSCHTTCYRPTCVISSCPRPLCCASSCC 195
Score = 53.1 bits (126), Expect = 4e-07
Identities = 25/57 (43%), Positives = 29/57 (50%)
Frame = +2
Query: 47 MVSSCCGSVCSDQGCGQDLXXXXXXXXXXXXXXXXXXXXXXXXXGVSTCCRPRCCIS 217
MV+SCCGSVCS QGCG+DL VS+CCRP+CC S
Sbjct: 1 MVNSCCGSVCSHQGCGRDLCQETCCRPSCCETTCCRTTYCRPSCCVSSCCRPQCCQS 57
Score = 50.1 bits (118), Expect = 3e-06
Identities = 19/31 (61%), Positives = 21/31 (67%)
Frame = +2
Query: 464 CGRVSCHTTCYRPICVISTCPRPTCCASSCC 556
C V C TC RP C IS+C RP+CC SSCC
Sbjct: 55 CQSVCCQPTCCRPRCCISSCCRPSCCVSSCC 85
Score = 48.9 bits (115), Expect = 7e-06
Identities = 18/31 (58%), Positives = 21/31 (67%)
Frame = +2
Query: 464 CGRVSCHTTCYRPICVISTCPRPTCCASSCC 556
C + C TC RP C IS+C RP+CC SSCC
Sbjct: 90 CQSMCCQPTCCRPRCCISSCCRPSCCVSSCC 120
>ref|NP_001139513.1| keratin-associated protein 4-9 [Homo sapiens].
Length = 210
Score = 80.1 bits (196), Expect = 3e-15
Identities = 31/35 (88%), Positives = 33/35 (94%)
Frame = +2
Query: 452 LRPVCGRVSCHTTCYRPICVISTCPRPTCCASSCC 556
+RPVCGRVSCHTTCYRP CVIS+CPRP CCASSCC
Sbjct: 176 VRPVCGRVSCHTTCYRPTCVISSCPRPLCCASSCC 210
Score = 58.5 bits (140), Expect = 9e-09
Identities = 28/57 (49%), Positives = 30/57 (52%)
Frame = +2
Query: 47 MVSSCCGSVCSDQGCGQDLXXXXXXXXXXXXXXXXXXXXXXXXXGVSTCCRPRCCIS 217
MVSSCCGSVCSDQGCGQDL VS+CCRP+CC S
Sbjct: 1 MVSSCCGSVCSDQGCGQDLCQETCCRPSCCETTCCRTTCCRPSCCVSSCCRPQCCQS 57
Score = 50.8 bits (120), Expect = 2e-06
Identities = 20/40 (50%), Positives = 24/40 (60%), Gaps = 6/40 (15%)
Frame = +2
Query: 455 RPVCGRVSC------HTTCYRPICVISTCPRPTCCASSCC 556
+P C R SC TTCYRP C +S+C RP CC +CC
Sbjct: 61 QPTCSRPSCCQTTCCRTTCYRPSCCVSSCCRPQCCQPACC 100
Score = 50.4 bits (119), Expect = 2e-06
Identities = 21/35 (60%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Frame = +2
Query: 455 RPVCGRVSC-HTTCYRPICVISTCPRPTCCASSCC 556
+P C R SC TTC P C IS+C RP+CC SSCC
Sbjct: 101 QPTCCRPSCCETTCCHPRCCISSCCRPSCCVSSCC 135
>ref|NP_149443.1| keratin-associated protein 4-3 [Homo sapiens].
Length = 195
Score = 56.6 bits (135), Expect = 3e-08
Identities = 27/58 (46%), Positives = 29/58 (50%)
Frame = +2
Query: 47 MVSSCCGSVCSDQGCGQDLXXXXXXXXXXXXXXXXXXXXXXXXXGVSTCCRPRCCISS 220
MVSSCCGSVCSDQ CGQ L +S+CCRP CCISS
Sbjct: 1 MVSSCCGSVCSDQSCGQGLGQESCCRPSCCQTTCCRTTCCRPSCCISSCCRPSCCISS 58
Score = 51.2 bits (121), Expect = 1e-06
Identities = 21/35 (60%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = +2
Query: 455 RPVCGRVSC-HTTCYRPICVISTCPRPTCCASSCC 556
RP C + +C TTC RP C IS+C RP+CC SSCC
Sbjct: 26 RPSCCQTTCCRTTCCRPSCCISSCCRPSCCISSCC 60
Score = 49.7 bits (117), Expect = 4e-06
Identities = 19/31 (61%), Positives = 21/31 (67%)
Frame = +2
Query: 464 CGRVSCHTTCYRPICVISTCPRPTCCASSCC 556
C C TTC RP C IS+C RP+CC SSCC
Sbjct: 60 CKPSCCRTTCCRPSCCISSCCRPSCCISSCC 90
Score = 49.7 bits (117), Expect = 4e-06
Identities = 19/31 (61%), Positives = 21/31 (67%)
Frame = +2
Query: 464 CGRVSCHTTCYRPICVISTCPRPTCCASSCC 556
C C TTC RP C IS+C RP+CC SSCC
Sbjct: 90 CKPSCCRTTCCRPSCCISSCCRPSCCISSCC 120
>ref|NP_149051.1| keratin-associated protein 4-2 [Homo sapiens].
Length = 136
Score = 56.2 bits (134), Expect = 4e-08
Identities = 22/35 (62%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Frame = +2
Query: 455 RPVCGRVSC-HTTCYRPICVISTCPRPTCCASSCC 556
RP CG+ +C TTCYRP C +STC RPTC + SCC
Sbjct: 102 RPSCGQTTCCRTTCYRPSCCVSTCCRPTCSSGSCC 136
Score = 48.5 bits (114), Expect = 9e-06
Identities = 24/58 (41%), Positives = 28/58 (48%)
Frame = +2
Query: 47 MVSSCCGSVCSDQGCGQDLXXXXXXXXXXXXXXXXXXXXXXXXXGVSTCCRPRCCISS 220
MV+SCCGSVCSDQGCG + +TCCRP CC+SS
Sbjct: 1 MVNSCCGSVCSDQGCGLENCCRPSCCQTTCCR--------------TTCCRPSCCVSS 44
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 30,569,987
Number of extensions: 784295
Number of successful extensions: 5244
Number of sequences better than 1.0e-05: 12
Number of HSP's gapped: 4803
Number of HSP's successfully gapped: 37
Length of query: 326
Length of database: 18,297,164
Length adjustment: 103
Effective length of query: 223
Effective length of database: 14,901,872
Effective search space: 3323117456
Effective search space used: 3323117456
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-003670
(979 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_083889.1| keratin-associated protein 4-6 [Mus musculus]. 73 3e-13
Alignment gi|NP_001119792.1| keratin associated protein 4-like [Mus muscu... 73 3e-13
Alignment gi|NP_001041661.1| keratin associated protein 4-1 [Mus musculus]. 73 3e-13
Alignment gi|NP_081083.2| keratin associated protein 4-2 [Mus musculus]. 72 7e-13
Alignment gi|NP_001092783.1| keratin associated protein 4 family member [... 52 9e-07
Alignment gi|NP_001079017.1| keratin associated protein 4 family member [... 51 2e-06
Alignment gi|NP_001094084.1| keratin associated protein 4-like [Mus muscu... 50 2e-06
Alignment gi|XP_003085567.1| PREDICTED: hypothetical protein LOC100502865... 50 2e-06
Alignment gi|XP_003085802.1| PREDICTED: hypothetical protein LOC100502865... 50 2e-06
Alignment gi|NP_001182312.1| hypothetical protein LOC666021 [Mus musculus]. 50 2e-06
>ref|NP_083889.1| keratin-associated protein 4-6 [Mus musculus].
Length = 168
Score = 73.2 bits (178), Expect = 3e-13
Identities = 28/35 (80%), Positives = 30/35 (85%)
Frame = +2
Query: 452 LRPVCGRVSCHTTCYRPICVISTCPRPTCCASSCC 556
LRPVCG+V C TTCYRP CVISTCPRP CCA+ CC
Sbjct: 134 LRPVCGQVCCQTTCYRPTCVISTCPRPMCCATPCC 168
>ref|NP_001119792.1| keratin associated protein 4-like [Mus musculus].
Length = 168
Score = 73.2 bits (178), Expect = 3e-13
Identities = 28/35 (80%), Positives = 30/35 (85%)
Frame = +2
Query: 452 LRPVCGRVSCHTTCYRPICVISTCPRPTCCASSCC 556
LRPVCG+V C TTCYRP CVISTCPRP CCA+ CC
Sbjct: 134 LRPVCGQVCCQTTCYRPTCVISTCPRPMCCATPCC 168
Score = 49.3 bits (116), Expect = 5e-06
Identities = 24/58 (41%), Positives = 28/58 (48%)
Frame = +2
Query: 47 MVSSCCGSVCSDQGCGQDLXXXXXXXXXXXXXXXXXXXXXXXXXGVSTCCRPRCCISS 220
MVSSCCGSVCS++GCGQ +TCCRP CC+SS
Sbjct: 1 MVSSCCGSVCSEEGCGQGCCQPSCCQTTCCR---------------TTCCRPSCCVSS 43
>ref|NP_001041661.1| keratin associated protein 4-1 [Mus musculus].
Length = 169
Score = 73.2 bits (178), Expect = 3e-13
Identities = 28/35 (80%), Positives = 30/35 (85%)
Frame = +2
Query: 452 LRPVCGRVSCHTTCYRPICVISTCPRPTCCASSCC 556
LRPVCG+V C TTCYRP CVISTCPRP CCA+ CC
Sbjct: 134 LRPVCGQVCCQTTCYRPTCVISTCPRPMCCATPCC 168
Score = 50.8 bits (120), Expect = 2e-06
Identities = 18/31 (58%), Positives = 21/31 (67%)
Frame = +2
Query: 464 CGRVSCHTTCYRPICVISTCPRPTCCASSCC 556
C C TTC RP C +S+C RP+CC SSCC
Sbjct: 25 CQTTCCRTTCCRPSCCVSSCCRPSCCVSSCC 55
>ref|NP_081083.2| keratin associated protein 4-2 [Mus musculus].
Length = 167
Score = 72.0 bits (175), Expect = 7e-13
Identities = 28/35 (80%), Positives = 29/35 (82%)
Frame = +2
Query: 452 LRPVCGRVSCHTTCYRPICVISTCPRPTCCASSCC 556
LRPVCG+V C TTCYRP CVISTCPRP CCA CC
Sbjct: 133 LRPVCGQVCCQTTCYRPTCVISTCPRPMCCAIPCC 167
Score = 50.8 bits (120), Expect = 2e-06
Identities = 18/31 (58%), Positives = 21/31 (67%)
Frame = +2
Query: 464 CGRVSCHTTCYRPICVISTCPRPTCCASSCC 556
C C TTC RP C +S+C RP+CC SSCC
Sbjct: 24 CQTTCCRTTCCRPSCCVSSCCRPSCCVSSCC 54
>ref|NP_001092783.1| keratin associated protein 4 family member [Mus musculus].
Length = 190
Score = 51.6 bits (122), Expect = 9e-07
Identities = 24/57 (42%), Positives = 28/57 (49%)
Frame = +2
Query: 47 MVSSCCGSVCSDQGCGQDLXXXXXXXXXXXXXXXXXXXXXXXXXGVSTCCRPRCCIS 217
MVSSCCGSVCS++GCGQ VS+CCRP+CC S
Sbjct: 1 MVSSCCGSVCSEEGCGQSCCQPSCCQTTCCRPSCCVSSCCRPSCCVSSCCRPQCCQS 57
Score = 49.7 bits (117), Expect = 3e-06
Identities = 18/31 (58%), Positives = 21/31 (67%)
Frame = +2
Query: 464 CGRVSCHTTCYRPICVISTCPRPTCCASSCC 556
C C TTC RP C +S+C RP+CC SSCC
Sbjct: 20 CQPSCCQTTCCRPSCCVSSCCRPSCCVSSCC 50
Score = 48.5 bits (114), Expect = 8e-06
Identities = 19/34 (55%), Positives = 22/34 (64%)
Frame = +2
Query: 455 RPVCGRVSCHTTCYRPICVISTCPRPTCCASSCC 556
RP+C C TC RP C +S+C RP CC SSCC
Sbjct: 136 RPIC----CQATCSRPGCCVSSCCRPQCCISSCC 165
>ref|NP_001079017.1| keratin associated protein 4 family member [Mus musculus].
Length = 244
Score = 50.8 bits (120), Expect = 2e-06
Identities = 18/31 (58%), Positives = 21/31 (67%)
Frame = +2
Query: 464 CGRVSCHTTCYRPICVISTCPRPTCCASSCC 556
C C TTC RP C +S+C RP+CC SSCC
Sbjct: 25 CQTTCCRTTCCRPSCCVSSCCRPSCCVSSCC 55
Score = 49.3 bits (116), Expect = 5e-06
Identities = 20/35 (57%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Frame = +2
Query: 455 RPVCGRVSC-HTTCYRPICVISTCPRPTCCASSCC 556
RP CG SC ++C RP C IS+C RP+CC SCC
Sbjct: 130 RPCCGSSSCCGSSCCRPTCCISSCCRPSCCRPSCC 164
>ref|NP_001094084.1| keratin associated protein 4-like [Mus musculus].
Length = 201
Score = 50.4 bits (119), Expect = 2e-06
Identities = 19/31 (61%), Positives = 21/31 (67%)
Frame = +2
Query: 464 CGRVSCHTTCYRPICVISTCPRPTCCASSCC 556
C V C TC RP C IS+C RP+CC SSCC
Sbjct: 115 CQSVCCQPTCCRPSCCISSCCRPSCCVSSCC 145
Score = 50.4 bits (119), Expect = 2e-06
Identities = 20/36 (55%), Positives = 25/36 (69%), Gaps = 2/36 (5%)
Frame = +2
Query: 455 RPVC--GRVSCHTTCYRPICVISTCPRPTCCASSCC 556
RP+C G C ++C RP C IS+C RP+CC SSCC
Sbjct: 146 RPICSGGSSCCGSSCCRPSCCISSCCRPSCCVSSCC 181
>ref|XP_003085567.1| PREDICTED: hypothetical protein LOC100502865 [Mus musculus].
Length = 239
Score = 50.4 bits (119), Expect = 2e-06
Identities = 24/58 (41%), Positives = 26/58 (44%)
Frame = +2
Query: 47 MVSSCCGSVCSDQGCGQDLXXXXXXXXXXXXXXXXXXXXXXXXXGVSTCCRPRCCISS 220
MVSSCCGSVCS++GCGQ TCC P CCISS
Sbjct: 1 MVSSCCGSVCSEEGCGQSCCQTTCCRPSCCVSSCCRPQCCQSVCCQPTCCHPSCCISS 58
Score = 50.4 bits (119), Expect = 2e-06
Identities = 18/31 (58%), Positives = 21/31 (67%)
Frame = +2
Query: 464 CGRVSCHTTCYRPICVISTCPRPTCCASSCC 556
CG+ C TTC RP C +S+C RP CC S CC
Sbjct: 15 CGQSCCQTTCCRPSCCVSSCCRPQCCQSVCC 45
>ref|XP_003085802.1| PREDICTED: hypothetical protein LOC100502865 [Mus musculus].
Length = 239
Score = 50.4 bits (119), Expect = 2e-06
Identities = 24/58 (41%), Positives = 26/58 (44%)
Frame = +2
Query: 47 MVSSCCGSVCSDQGCGQDLXXXXXXXXXXXXXXXXXXXXXXXXXGVSTCCRPRCCISS 220
MVSSCCGSVCS++GCGQ TCC P CCISS
Sbjct: 1 MVSSCCGSVCSEEGCGQSCCQTTCCRPSCCVSSCCRPQCCQSVCCQPTCCHPSCCISS 58
Score = 50.4 bits (119), Expect = 2e-06
Identities = 18/31 (58%), Positives = 21/31 (67%)
Frame = +2
Query: 464 CGRVSCHTTCYRPICVISTCPRPTCCASSCC 556
CG+ C TTC RP C +S+C RP CC S CC
Sbjct: 15 CGQSCCQTTCCRPSCCVSSCCRPQCCQSVCC 45
>ref|NP_001182312.1| hypothetical protein LOC666021 [Mus musculus].
Length = 262
Score = 50.4 bits (119), Expect = 2e-06
Identities = 24/58 (41%), Positives = 26/58 (44%)
Frame = +2
Query: 47 MVSSCCGSVCSDQGCGQDLXXXXXXXXXXXXXXXXXXXXXXXXXGVSTCCRPRCCISS 220
MVSSCCGSVCS++GCGQ TCC P CCISS
Sbjct: 1 MVSSCCGSVCSEEGCGQSCCQTTCCRPSCCVSSCCRPQCCQSVCCQPTCCHPSCCISS 58
Score = 50.4 bits (119), Expect = 2e-06
Identities = 18/31 (58%), Positives = 21/31 (67%)
Frame = +2
Query: 464 CGRVSCHTTCYRPICVISTCPRPTCCASSCC 556
CG+ C TTC RP C +S+C RP CC S CC
Sbjct: 15 CGQSCCQTTCCRPSCCVSSCCRPQCCQSVCC 45
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 25,850,877
Number of extensions: 662017
Number of successful extensions: 6150
Number of sequences better than 1.0e-05: 16
Number of HSP's gapped: 5238
Number of HSP's successfully gapped: 30
Length of query: 326
Length of database: 15,617,559
Length adjustment: 102
Effective length of query: 224
Effective length of database: 12,553,887
Effective search space: 2812070688
Effective search space used: 2812070688
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-003670
(979 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_003358099.1| PREDICTED: keratin-associated protein 4-7-li... 87 1e-17
Alignment gi|XP_003358096.1| PREDICTED: keratin-associated protein 4-8-li... 87 1e-17
Alignment gi|XP_003131493.1| PREDICTED: keratin-associated protein 4-11-l... 87 1e-17
Alignment gi|XP_003131492.1| PREDICTED: keratin-associated protein 4-11-l... 85 5e-17
Alignment gi|XP_003131491.1| PREDICTED: keratin-associated protein 4-11-l... 85 5e-17
Alignment gi|XP_003131523.2| PREDICTED: keratin-associated protein 4-11-l... 81 1e-15
Alignment gi|XP_003358097.1| PREDICTED: keratin-associated protein 4-11-l... 73 3e-13
Alignment gi|XP_003358098.1| PREDICTED: keratin-associated protein 9-4-li... 48 7e-06
Alignment gi|XP_003131497.1| PREDICTED: keratin-associated protein 9-7-li... 48 7e-06
>ref|XP_003358099.1| PREDICTED: keratin-associated protein 4-7-like [Sus scrofa].
Length = 170
Score = 87.0 bits (214), Expect = 1e-17
Identities = 35/35 (100%), Positives = 35/35 (100%)
Frame = +2
Query: 452 LRPVCGRVSCHTTCYRPICVISTCPRPTCCASSCC 556
LRPVCGRVSCHTTCYRPICVISTCPRPTCCASSCC
Sbjct: 136 LRPVCGRVSCHTTCYRPICVISTCPRPTCCASSCC 170
Score = 71.6 bits (174), Expect = 6e-13
Identities = 34/59 (57%), Positives = 34/59 (57%)
Frame = +2
Query: 47 MVSSCCGSVCSDQGCGQDLXXXXXXXXXXXXXXXXXXXXXXXXXGVSTCCRPRCCISSG 223
MVSSCCGSVCSDQGCGQDL GVSTCCRPRCCISSG
Sbjct: 1 MVSSCCGSVCSDQGCGQDLCQETCCSPSCCQTTCCRTTCCRPSCGVSTCCRPRCCISSG 59
>ref|XP_003358096.1| PREDICTED: keratin-associated protein 4-8-like [Sus scrofa].
Length = 140
Score = 87.0 bits (214), Expect = 1e-17
Identities = 35/35 (100%), Positives = 35/35 (100%)
Frame = +2
Query: 452 LRPVCGRVSCHTTCYRPICVISTCPRPTCCASSCC 556
LRPVCGRVSCHTTCYRPICVISTCPRPTCCASSCC
Sbjct: 106 LRPVCGRVSCHTTCYRPICVISTCPRPTCCASSCC 140
Score = 63.5 bits (153), Expect = 2e-10
Identities = 30/57 (52%), Positives = 31/57 (54%)
Frame = +2
Query: 47 MVSSCCGSVCSDQGCGQDLXXXXXXXXXXXXXXXXXXXXXXXXXGVSTCCRPRCCIS 217
MVSSCCGSVCSDQGCGQDL GVSTCCRP+CC S
Sbjct: 1 MVSSCCGSVCSDQGCGQDLCQETCCSPSCCQTTCCRTTCCRPSCGVSTCCRPQCCQS 57
Score = 48.9 bits (115), Expect = 4e-06
Identities = 19/31 (61%), Positives = 20/31 (64%)
Frame = +2
Query: 464 CGRVSCHTTCYRPICVISTCPRPTCCASSCC 556
C V C TC RP C IS+C RP CC SSCC
Sbjct: 55 CQSVCCQPTCCRPRCCISSCCRPLCCQSSCC 85
Score = 48.1 bits (113), Expect = 7e-06
Identities = 18/31 (58%), Positives = 19/31 (61%)
Frame = +2
Query: 464 CGRVSCHTTCYRPICVISTCPRPTCCASSCC 556
C C TTC RP C +STC RP CC S CC
Sbjct: 30 CQTTCCRTTCCRPSCGVSTCCRPQCCQSVCC 60
>ref|XP_003131493.1| PREDICTED: keratin-associated protein 4-11-like [Sus scrofa].
Length = 170
Score = 87.0 bits (214), Expect = 1e-17
Identities = 35/35 (100%), Positives = 35/35 (100%)
Frame = +2
Query: 452 LRPVCGRVSCHTTCYRPICVISTCPRPTCCASSCC 556
LRPVCGRVSCHTTCYRPICVISTCPRPTCCASSCC
Sbjct: 136 LRPVCGRVSCHTTCYRPICVISTCPRPTCCASSCC 170
Score = 71.6 bits (174), Expect = 6e-13
Identities = 34/59 (57%), Positives = 34/59 (57%)
Frame = +2
Query: 47 MVSSCCGSVCSDQGCGQDLXXXXXXXXXXXXXXXXXXXXXXXXXGVSTCCRPRCCISSG 223
MVSSCCGSVCSDQGCGQDL GVSTCCRPRCCISSG
Sbjct: 1 MVSSCCGSVCSDQGCGQDLCQETCCSPSCCQTTCCRTTCCRPSCGVSTCCRPRCCISSG 59
Score = 48.9 bits (115), Expect = 4e-06
Identities = 19/31 (61%), Positives = 20/31 (64%)
Frame = +2
Query: 464 CGRVSCHTTCYRPICVISTCPRPTCCASSCC 556
C V C TC RP C IS+C RP CC SSCC
Sbjct: 65 CQSVCCQPTCCRPRCCISSCCRPPCCQSSCC 95
>ref|XP_003131492.1| PREDICTED: keratin-associated protein 4-11-like isoform 1 [Sus
scrofa].
Length = 160
Score = 85.1 bits (209), Expect = 5e-17
Identities = 34/35 (97%), Positives = 34/35 (97%)
Frame = +2
Query: 452 LRPVCGRVSCHTTCYRPICVISTCPRPTCCASSCC 556
LRPVCGRVSCHTTCYRP CVISTCPRPTCCASSCC
Sbjct: 126 LRPVCGRVSCHTTCYRPTCVISTCPRPTCCASSCC 160
Score = 49.7 bits (117), Expect = 2e-06
Identities = 25/55 (45%), Positives = 26/55 (47%)
Frame = +2
Query: 47 MVSSCCGSVCSDQGCGQDLXXXXXXXXXXXXXXXXXXXXXXXXXGVSTCCRPRCC 211
MVSSCCGSVCSDQGCGQ L +TCCRP CC
Sbjct: 1 MVSSCCGSVCSDQGCGQGLCQEICCRPSCCQTTCCR----------TTCCRPSCC 45
Score = 49.3 bits (116), Expect = 3e-06
Identities = 21/35 (60%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = +2
Query: 455 RPVCGRVSC-HTTCYRPICVISTCPRPTCCASSCC 556
RP C R +C TTC RP C IS+C RP CC S CC
Sbjct: 76 RPQCCRTTCCRTTCCRPRCCISSCCRPRCCQSVCC 110
>ref|XP_003131491.1| PREDICTED: keratin-associated protein 4-11-like [Sus scrofa].
Length = 206
Score = 85.1 bits (209), Expect = 5e-17
Identities = 34/35 (97%), Positives = 34/35 (97%)
Frame = +2
Query: 452 LRPVCGRVSCHTTCYRPICVISTCPRPTCCASSCC 556
LRPVCGRVSCHTTCYRP CVISTCPRPTCCASSCC
Sbjct: 172 LRPVCGRVSCHTTCYRPTCVISTCPRPTCCASSCC 206
>ref|XP_003131523.2| PREDICTED: keratin-associated protein 4-11-like [Sus scrofa].
Length = 170
Score = 80.9 bits (198), Expect = 1e-15
Identities = 33/35 (94%), Positives = 33/35 (94%)
Frame = +2
Query: 452 LRPVCGRVSCHTTCYRPICVISTCPRPTCCASSCC 556
LRPVCGRVSCHTT YRP CVISTCPRPTCCASSCC
Sbjct: 136 LRPVCGRVSCHTTYYRPTCVISTCPRPTCCASSCC 170
Score = 71.6 bits (174), Expect = 6e-13
Identities = 34/59 (57%), Positives = 34/59 (57%)
Frame = +2
Query: 47 MVSSCCGSVCSDQGCGQDLXXXXXXXXXXXXXXXXXXXXXXXXXGVSTCCRPRCCISSG 223
MVSSCCGSVCSDQGCGQDL GVSTCCRPRCCISSG
Sbjct: 1 MVSSCCGSVCSDQGCGQDLCQETCCSPSCCQTTCCRTTCCRPSCGVSTCCRPRCCISSG 59
>ref|XP_003358097.1| PREDICTED: keratin-associated protein 4-11-like isoform 2 [Sus
scrofa].
Length = 150
Score = 72.8 bits (177), Expect = 3e-13
Identities = 27/31 (87%), Positives = 28/31 (90%)
Frame = +2
Query: 464 CGRVSCHTTCYRPICVISTCPRPTCCASSCC 556
CG + CHTTCYRP CVISTCPRPTCCASSCC
Sbjct: 120 CGSICCHTTCYRPTCVISTCPRPTCCASSCC 150
Score = 49.7 bits (117), Expect = 2e-06
Identities = 25/55 (45%), Positives = 26/55 (47%)
Frame = +2
Query: 47 MVSSCCGSVCSDQGCGQDLXXXXXXXXXXXXXXXXXXXXXXXXXGVSTCCRPRCC 211
MVSSCCGSVCSDQGCGQ L +TCCRP CC
Sbjct: 1 MVSSCCGSVCSDQGCGQGLCQEICCRPSCCQTTCCR----------TTCCRPSCC 45
Score = 49.3 bits (116), Expect = 3e-06
Identities = 21/35 (60%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = +2
Query: 455 RPVCGRVSC-HTTCYRPICVISTCPRPTCCASSCC 556
RP C R +C TTC RP C IS+C RP CC S CC
Sbjct: 76 RPQCCRTTCCRTTCCRPRCCISSCCRPRCCQSVCC 110
>ref|XP_003358098.1| PREDICTED: keratin-associated protein 9-4-like [Sus scrofa].
Length = 173
Score = 48.1 bits (113), Expect = 7e-06
Identities = 19/33 (57%), Positives = 22/33 (66%)
Frame = +2
Query: 458 PVCGRVSCHTTCYRPICVISTCPRPTCCASSCC 556
P C C TTC +P CV +TC +PTCC SSCC
Sbjct: 8 PCCQPTCCETTCRKPTCV-TTCCQPTCCESSCC 39
>ref|XP_003131497.1| PREDICTED: keratin-associated protein 9-7-like [Sus scrofa].
Length = 158
Score = 48.1 bits (113), Expect = 7e-06
Identities = 19/33 (57%), Positives = 22/33 (66%)
Frame = +2
Query: 458 PVCGRVSCHTTCYRPICVISTCPRPTCCASSCC 556
P C C TTC +P CV +TC +PTCC SSCC
Sbjct: 8 PCCQPTCCETTCRKPTCV-TTCCQPTCCESSCC 39
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 20,489,762
Number of extensions: 693956
Number of successful extensions: 3064
Number of sequences better than 1.0e-05: 9
Number of HSP's gapped: 2831
Number of HSP's successfully gapped: 25
Length of query: 326
Length of database: 11,343,932
Length adjustment: 99
Effective length of query: 227
Effective length of database: 8,879,129
Effective search space: 2015562283
Effective search space used: 2015562283
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-003670
(979 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr12 999 0.0
gb|GL894226.1| Sus scrofa unplaced genomic scaffold chrU_scaffol... 210 1e-51
>Sscrofa_Chr12
|| Length = 63588571
Score = 999 bits (504), Expect = 0.0
Identities = 510/512 (99%)
Strand = Plus / Minus
Query: 452 ctgcgccccgtctgtggccgggtctcctgccacaccacttgctatcgccccatctgtgtc 511
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 21594861 ctgcgccccgtctgtggccgggtctcctgccacaccacttgctaccgccccatctgtgtc 21594802
Query: 512 atctccacctgcccccgccccacgtgctgtgcctcctcctgctgctgaatctctcctttg 571
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21594801 atctccacctgcccccgccccacgtgctgtgcctcctcctgctgctgaatctctcctttg 21594742
Query: 572 gacacactgcttcctcatctcctccctccccaaagatgctgattctcctctttaaatgcg 631
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21594741 gacacactgcttcctcatctcctccctccccaaagatgctgattctcctctttaaatgcg 21594682
Query: 632 gcctgctcgcgagaattgatctcctgggtctccagagcagaccccagccccactgagcac 691
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21594681 gcctgctcgcgagaattgatctcctgggtctccagagcagaccccagccccactgagcac 21594622
Query: 692 acgttcttacttccgtccaaactccctcccttctcagggaactcattcagaacctcctcg 751
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21594621 acgttcttacttccgtccaaactccctcccttctcagggaactcattcagaacctcctcg 21594562
Query: 752 gaaattaaactccccccacactcctccccttgtcttcaggaatccatccttcctgcttca 811
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21594561 gaaattaaactccccctacactcctccccttgtcttcaggaatccatccttcctgcttca 21594502
Query: 812 ggaatctggctccatcactggtggggccacaggttttcaccccctggcacagcagccctc 871
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21594501 ggaatctggctccatcactggtggggccacaggttttcaccccctggcacagcagccctc 21594442
Query: 872 gaagtcttcctgggtattatctgcacaacttttgcttatgtattggtatttccatgtatg 931
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21594441 gaagtcttcctgggtattatctgcacaacttttgcttatgtattggtatttccatgtatg 21594382
Query: 932 aaaataaacgtctctcctagcactgaaaaggg 963
||||||||||||||||||||||||||||||||
Sbjct: 21594381 aaaataaacgtctctcctagcactgaaaaggg 21594350
Score = 999 bits (504), Expect = 0.0
Identities = 510/512 (99%)
Strand = Plus / Minus
Query: 452 ctgcgccccgtctgtggccgggtctcctgccacaccacttgctatcgccccatctgtgtc 511
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 21638542 ctgcgccccgtctgtggccgggtctcctgccacaccacttgctaccgccccatctgtgtc 21638483
Query: 512 atctccacctgcccccgccccacgtgctgtgcctcctcctgctgctgaatctctcctttg 571
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21638482 atctccacctgcccccgccccacgtgctgtgcctcctcctgctgctgaatctctcctttg 21638423
Query: 572 gacacactgcttcctcatctcctccctccccaaagatgctgattctcctctttaaatgcg 631
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21638422 gacacactgcttcctcatctcctccctccccaaagatgctgattctcctctttaaatgcg 21638363
Query: 632 gcctgctcgcgagaattgatctcctgggtctccagagcagaccccagccccactgagcac 691
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21638362 gcctgctcgcgagaattgatctcctgggtctccagagcagaccccagccccactgagcac 21638303
Query: 692 acgttcttacttccgtccaaactccctcccttctcagggaactcattcagaacctcctcg 751
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21638302 acgttcttacttccgtccaaactccctcccttctcagggaactcattcagaacctcctcg 21638243
Query: 752 gaaattaaactccccccacactcctccccttgtcttcaggaatccatccttcctgcttca 811
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21638242 gaaattaaactccccctacactcctccccttgtcttcaggaatccatccttcctgcttca 21638183
Query: 812 ggaatctggctccatcactggtggggccacaggttttcaccccctggcacagcagccctc 871
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21638182 ggaatctggctccatcactggtggggccacaggttttcaccccctggcacagcagccctc 21638123
Query: 872 gaagtcttcctgggtattatctgcacaacttttgcttatgtattggtatttccatgtatg 931
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21638122 gaagtcttcctgggtattatctgcacaacttttgcttatgtattggtatttccatgtatg 21638063
Query: 932 aaaataaacgtctctcctagcactgaaaaggg 963
||||||||||||||||||||||||||||||||
Sbjct: 21638062 aaaataaacgtctctcctagcactgaaaaggg 21638031
Score = 343 bits (173), Expect = 1e-91
Identities = 173/173 (100%)
Strand = Plus / Minus
Query: 179 ggtgtgtccacctgctgccgccccagatgctgcatctccagcggctgcaggccccaatgc 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21595134 ggtgtgtccacctgctgccgccccagatgctgcatctccagcggctgcaggccccaatgc 21595075
Query: 239 tgccagtctgtgtgctgccagcccacctgctgccgccccagatgctgcatctctagctgc 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21595074 tgccagtctgtgtgctgccagcccacctgctgccgccccagatgctgcatctctagctgc 21595015
Query: 299 tgcaggcccccgtgctgccagtcctcgtgctgccagccctcctgctctcagcc 351
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21595014 tgcaggcccccgtgctgccagtcctcgtgctgccagccctcctgctctcagcc 21594962
Score = 295 bits (149), Expect = 2e-77
Identities = 167/173 (96%)
Strand = Plus / Minus
Query: 179 ggtgtgtccacctgctgccgccccagatgctgcatctccagcggctgcaggccccaatgc 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21638815 ggtgtgtccacctgctgccgccccagatgctgcatctccagcggctgcaggccccaatgc 21638756
Query: 239 tgccagtctgtgtgctgccagcccacctgctgccgccccagatgctgcatctctagctgc 298
||||||||||||||||||||||||||||||| | ||| | ||||||||||||||||||
Sbjct: 21638755 tgccagtctgtgtgctgccagcccacctgctctcagccccgctgctgcatctctagctgc 21638696
Query: 299 tgcaggcccccgtgctgccagtcctcgtgctgccagccctcctgctctcagcc 351
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21638695 tgcaggcccccgtgctgccagtcctcgtgctgccagccctcctgctctcagcc 21638643
Score = 258 bits (130), Expect = 5e-66
Identities = 157/166 (94%)
Strand = Plus / Minus
Query: 179 ggtgtgtccacctgctgccgccccagatgctgcatctccagcggctgcaggccccaatgc 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21608968 ggtgtgtccacctgctgccgccccagatgctgcatctccagcggctgcaggccccaatgc 21608909
Query: 239 tgccagtctgtgtgctgccagcccacctgctgccgccccagatgctgcatctctagctgc 298
||||||||||||||||||||||||||||||| | ||| | ||||||||||||||||||
Sbjct: 21608908 tgccagtctgtgtgctgccagcccacctgctctcagccccgctgctgcatctctagctgc 21608849
Query: 299 tgcaggcccccgtgctgccagtcctcgtgctgccagccctcctgct 344
|||||||||| |||||||||||||| |||||||||||||||||||
Sbjct: 21608848 tgcaggccccaatgctgccagtcctcctgctgccagccctcctgct 21608803
Score = 236 bits (119), Expect = 2e-59
Identities = 149/159 (93%)
Strand = Plus / Minus
Query: 186 ccacctgctgccgccccagatgctgcatctccagcggctgcaggccccaatgctgccagt 245
||||||||||||||||||| ||| | | |||| | |||||||||| |||||||||||||
Sbjct: 21684758 ccacctgctgccgccccagctgcggtgtgtccacctgctgcaggcctcaatgctgccagt 21684699
Query: 246 ctgtgtgctgccagcccacctgctgccgccccagatgctgcatctctagctgctgcaggc 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21684698 ctgtgtgctgccagcccacctgctgccgccccagatgctgcatctctagctgctgcaggc 21684639
Query: 306 ccccgtgctgccagtcctcgtgctgccagccctcctgct 344
||| ||||||||||||||| |||||||||||||||||||
Sbjct: 21684638 ccctgtgctgccagtcctcatgctgccagccctcctgct 21684600
Score = 218 bits (110), Expect = 4e-54
Identities = 152/166 (91%)
Strand = Plus / Minus
Query: 186 ccacctgctgccgccccagatgctgcatctccagcggctgcaggccccaatgctgccagt 245
|||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 21599454 ccacttgctgccgccccagatgctgcatctccagctgctgcaggccccaatgctgccagt 21599395
Query: 246 ctgtgtgctgccagcccacctgctgccgccccagatgctgcatctctagctgctgcaggc 305
|||||||||||||||||||||||| | ||| | |||||||||||||||||||||||||
Sbjct: 21599394 ctgtgtgctgccagcccacctgctctcagccccgctgctgcatctctagctgctgcaggc 21599335
Query: 306 ccccgtgctgccagtcctcgtgctgccagccctcctgctctcagcc 351
||| ||||||||||| ||||||||||||| |||||||||||||
Sbjct: 21599334 cccaatgctgccagtctgtgtgctgccagcccacctgctctcagcc 21599289
Score = 214 bits (108), Expect = 7e-53
Identities = 108/108 (100%)
Strand = Plus / Minus
Query: 452 ctgcgccccgtctgtggccgggtctcctgccacaccacttgctatcgccccatctgtgtc 511
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21684552 ctgcgccccgtctgtggccgggtctcctgccacaccacttgctatcgccccatctgtgtc 21684493
Query: 512 atctccacctgcccccgccccacgtgctgtgcctcctcctgctgctga 559
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21684492 atctccacctgcccccgccccacgtgctgtgcctcctcctgctgctga 21684445
Score = 210 bits (106), Expect = 1e-51
Identities = 112/114 (98%)
Strand = Plus / Minus
Query: 452 ctgcgccccgtctgtggccgggtctcctgccacaccacttgctatcgccccatctgtgtc 511
|||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||
Sbjct: 21616445 ctgcgccccgtctgtggccgggtctcctgccacaccacttgctaccgccccacctgtgtc 21616386
Query: 512 atctccacctgcccccgccccacgtgctgtgcctcctcctgctgctgaatctct 565
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21616385 atctccacctgcccccgccccacgtgctgtgcctcctcctgctgctgaatctct 21616332
Score = 204 bits (103), Expect = 7e-50
Identities = 130/139 (93%)
Strand = Plus / Minus
Query: 206 tgctgcatctccagcggctgcaggccccaatgctgccagtctgtgtgctgccagcccacc 265
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21599209 tgctgcatctccagctgctgcaggccccaatgctgccagtctgtgtgctgccagcccacc 21599150
Query: 266 tgctgccgccccagatgctgcatctctagctgctgcaggcccccgtgctgccagtcctcg 325
|||| | ||| | |||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 21599149 tgctctcagccccgctgctgcatctctagctgctgcaggccccaatgctgccagtcctcg 21599090
Query: 326 tgctgccagccctcctgct 344
|||||||||||||||||||
Sbjct: 21599089 tgctgccagccctcctgct 21599071
Score = 198 bits (100), Expect = 4e-48
Identities = 106/108 (98%)
Strand = Plus / Minus
Query: 452 ctgcgccccgtctgtggccgggtctcctgccacaccacttgctatcgccccatctgtgtc 511
|||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||
Sbjct: 21599023 ctgcgccccgtctgtggccgggtctcctgccacaccacttgctaccgccccacctgtgtc 21598964
Query: 512 atctccacctgcccccgccccacgtgctgtgcctcctcctgctgctga 559
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21598963 atctccacctgcccccgccccacgtgctgtgcctcctcctgctgctga 21598916
Score = 198 bits (100), Expect = 4e-48
Identities = 106/108 (98%)
Strand = Plus / Minus
Query: 452 ctgcgccccgtctgtggccgggtctcctgccacaccacttgctatcgccccatctgtgtc 511
|||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||
Sbjct: 21608695 ctgcgccccgtctgtggccgggtctcctgccacaccacttactatcgccccacctgtgtc 21608636
Query: 512 atctccacctgcccccgccccacgtgctgtgcctcctcctgctgctga 559
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21608635 atctccacctgcccccgccccacgtgctgtgcctcctcctgctgctga 21608588
Score = 188 bits (95), Expect = 4e-45
Identities = 102/103 (99%), Gaps = 1/103 (0%)
Strand = Plus / Minus
Query: 1 agctcactgccctggaaacc-acccccaacctccaccctcggacaccatggtcagctcgt 59
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 21595313 agctcactgccctggaaacccacccccaacctccaccctcggacaccatggtcagctcgt 21595254
Query: 60 gttgtggctccgtctgctctgaccagggctgtggccaagacct 102
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21595253 gttgtggctccgtctgctctgaccagggctgtggccaagacct 21595211
Score = 188 bits (95), Expect = 4e-45
Identities = 102/103 (99%), Gaps = 1/103 (0%)
Strand = Plus / Minus
Query: 1 agctcactgccctggaaac-cacccccaacctccaccctcggacaccatggtcagctcgt 59
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 21638994 agctcactgccctggaaacgcacccccaacctccaccctcggacaccatggtcagctcgt 21638935
Query: 60 gttgtggctccgtctgctctgaccagggctgtggccaagacct 102
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21638934 gttgtggctccgtctgctctgaccagggctgtggccaagacct 21638892
Score = 188 bits (95), Expect = 4e-45
Identities = 102/103 (99%), Gaps = 1/103 (0%)
Strand = Plus / Minus
Query: 1 agctcactgccctggaaac-cacccccaacctccaccctcggacaccatggtcagctcgt 59
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 21684914 agctcactgccctggaaacgcacccccaacctccaccctcggacaccatggtcagctcgt 21684855
Query: 60 gttgtggctccgtctgctctgaccagggctgtggccaagacct 102
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21684854 gttgtggctccgtctgctctgaccagggctgtggccaagacct 21684812
Score = 178 bits (90), Expect = 4e-42
Identities = 132/146 (90%)
Strand = Plus / Minus
Query: 206 tgctgcatctccagcggctgcaggccccaatgctgccagtctgtgtgctgccagcccacc 265
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21599284 tgctgcatctccagctgctgcaggccccaatgctgccagtctgtgtgctgccagcccacc 21599225
Query: 266 tgctgccgccccagatgctgcatctctagctgctgcaggcccccgtgctgccagtcctcg 325
|||| | ||| | ||||||||||| |||||||||||||||| ||||||||||| |
Sbjct: 21599224 tgctctcagccccgctgctgcatctccagctgctgcaggccccaatgctgccagtctgtg 21599165
Query: 326 tgctgccagccctcctgctctcagcc 351
|||||||||||| |||||||||||||
Sbjct: 21599164 tgctgccagcccacctgctctcagcc 21599139
Score = 161 bits (81), Expect = 9e-37
Identities = 114/125 (91%)
Strand = Plus / Minus
Query: 206 tgctgcatctccagcggctgcaggccccaatgctgccagtctgtgtgctgccagcccacc 265
||||||||||| ||| ||||||||||||||||||||||||| |||||||||||| ||
Sbjct: 21608866 tgctgcatctctagctgctgcaggccccaatgctgccagtcctcctgctgccagccctcc 21608807
Query: 266 tgctgccgccccagatgctgcatctctagctgctgcaggcccccgtgctgccagtcctcg 325
|||||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||
Sbjct: 21608806 tgctgccgccccagatgctgcatctccagcggctgcaggcccccgtgctgccagccctcc 21608747
Query: 326 tgctg 330
|||||
Sbjct: 21608746 tgctg 21608742
Score = 153 bits (77), Expect = 2e-34
Identities = 128/145 (88%)
Strand = Plus / Minus
Query: 186 ccacctgctgccgccccagatgctgcatctccagcggctgcaggccccaatgctgccagt 245
||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||||
Sbjct: 21595052 ccacctgctgccgccccagatgctgcatctctagctgctgcaggcccccgtgctgccagt 21594993
Query: 246 ctgtgtgctgccagcccacctgctgccgccccagatgctgcatctctagctgctgcaggc 305
| ||||||||||||| |||||| | ||| | |||||||||||||||||||||||||
Sbjct: 21594992 cctcgtgctgccagccctcctgctctcagccccgctgctgcatctctagctgctgcaggc 21594933
Query: 306 ccccgtgctgccagtcctcgtgctg 330
||| |||||||||| |||| |||||
Sbjct: 21594932 cccagtgctgccagccctcctgctg 21594908
Score = 151 bits (76), Expect = 8e-34
Identities = 76/76 (100%)
Strand = Plus / Minus
Query: 27 aacctccaccctcggacaccatggtcagctcgtgttgtggctccgtctgctctgaccagg 86
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21609120 aacctccaccctcggacaccatggtcagctcgtgttgtggctccgtctgctctgaccagg 21609061
Query: 87 gctgtggccaagacct 102
||||||||||||||||
Sbjct: 21609060 gctgtggccaagacct 21609045
Score = 137 bits (69), Expect = 1e-29
Identities = 93/101 (92%)
Strand = Plus / Minus
Query: 251 tgctgccagcccacctgctgccgccccagatgctgcatctctagctgctgcaggcccccg 310
|||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 21599464 tgctgccagcccacttgctgccgccccagatgctgcatctccagctgctgcaggccccaa 21599405
Query: 311 tgctgccagtcctcgtgctgccagccctcctgctctcagcc 351
||||||||||| ||||||||||||| |||||||||||||
Sbjct: 21599404 tgctgccagtctgtgtgctgccagcccacctgctctcagcc 21599364
Score = 137 bits (69), Expect = 1e-29
Identities = 91/97 (93%), Gaps = 1/97 (1%)
Strand = Plus / Minus
Query: 3 ctcactgccctggaaacc-acccccaacctccaccctcggacaccatggtcagctcgtgt 61
||||||| |||||||||| | || ||||||||||||||||||||||||||||||| |||
Sbjct: 21616982 ctcactgtcctggaaacccagccagaacctccaccctcggacaccatggtcagctcctgt 21616923
Query: 62 tgtggctccgtctgctctgaccagggctgtggccaag 98
|||||||||||||||||||||||||||||||||||||
Sbjct: 21616922 tgtggctccgtctgctctgaccagggctgtggccaag 21616886
Score = 135 bits (68), Expect = 5e-29
Identities = 86/92 (93%)
Strand = Plus / Minus
Query: 186 ccacctgctgccgccccagatgctgcatctccagcggctgcaggccccaatgctgccagt 245
||||||||||||||||||||||||||||||||||| ||||| | |||| ||||||||||
Sbjct: 21616678 ccacctgctgccgccccagatgctgcatctccagctgctgccgcccccggtgctgccagt 21616619
Query: 246 ctgtgtgctgccagcccacctgctgccgcccc 277
|||||||||| |||||||||||||||||||||
Sbjct: 21616618 ctgtgtgctgtcagcccacctgctgccgcccc 21616587
Score = 121 bits (61), Expect = 8e-25
Identities = 103/117 (88%)
Strand = Plus / Minus
Query: 200 cccagatgctgcatctccagcggctgcaggccccaatgctgccagtctgtgtgctgccag 259
||||| |||| | |||||||| | |||||||||| ||||||||||||||||||||||||
Sbjct: 21624037 cccaggtgctacctctccagctgttgcaggcccccttgctgccagtctgtgtgctgccag 21623978
Query: 260 cccacctgctgccgccccagatgctgcatctctagctgctgcaggcccccgtgctgc 316
|||||||||||||| ||||| || ||||| ||||| |||||| ||||||| ||||||
Sbjct: 21623977 cccacctgctgccgacccagctgttgcatttctagttgctgccggcccccctgctgc 21623921
Score = 117 bits (59), Expect = 1e-23
Identities = 83/91 (91%)
Strand = Plus / Minus
Query: 261 ccacctgctgccgccccagatgctgcatctctagctgctgcaggcccccgtgctgccagt 320
||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||||
Sbjct: 21608961 ccacctgctgccgccccagatgctgcatctccagcggctgcaggccccaatgctgccagt 21608902
Query: 321 cctcgtgctgccagccctcctgctctcagcc 351
| ||||||||||||| |||||||||||||
Sbjct: 21608901 ctgtgtgctgccagcccacctgctctcagcc 21608871
Score = 113 bits (57), Expect = 2e-22
Identities = 108/125 (86%)
Strand = Plus / Minus
Query: 206 tgctgcatctccagcggctgcaggccccaatgctgccagtctgtgtgctgccagcccacc 265
||||||||||| ||| |||||||||||| ||||||||||| ||||||||||||| ||
Sbjct: 21638713 tgctgcatctctagctgctgcaggcccccgtgctgccagtcctcgtgctgccagccctcc 21638654
Query: 266 tgctgccgccccagatgctgcatctctagctgctgcaggcccccgtgctgccagtcctcg 325
|||| | ||| | |||||||||||||||||||||||||||| |||||||||| ||||
Sbjct: 21638653 tgctctcagccccgctgctgcatctctagctgctgcaggccccagtgctgccagccctcc 21638594
Query: 326 tgctg 330
|||||
Sbjct: 21638593 tgctg 21638589
Score = 111 bits (56), Expect = 7e-22
Identities = 65/68 (95%)
Strand = Plus / Minus
Query: 27 aacctccaccctcggacaccatggtcagctcgtgttgtggctccgtctgctctgaccagg 86
||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 21599601 aacctccaccctcagacaccatggtcagctcgtgttgtggctccgtctgctctgagcaga 21599542
Query: 87 gctgtggc 94
||||||||
Sbjct: 21599541 gctgtggc 21599534
Score = 99.6 bits (50), Expect = 3e-18
Identities = 83/94 (88%)
Strand = Plus / Minus
Query: 251 tgctgccagcccacctgctgccgccccagatgctgcatctctagctgctgcaggcccccg 310
||||||| | ||||||||||||||||||||||||||||||| ||||||||| | |||| |
Sbjct: 21616688 tgctgccggaccacctgctgccgccccagatgctgcatctccagctgctgccgcccccgg 21616629
Query: 311 tgctgccagtcctcgtgctgccagccctcctgct 344
||||||||||| |||||| |||||| ||||||
Sbjct: 21616628 tgctgccagtctgtgtgctgtcagcccacctgct 21616595
Score = 95.6 bits (48), Expect = 4e-17
Identities = 54/56 (96%)
Strand = Plus / Minus
Query: 189 cctgctgccgccccagatgctgcatctccagcggctgcaggccccaatgctgccag 244
||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 21608808 cctgctgccgccccagatgctgcatctccagcggctgcaggcccccgtgctgccag 21608753
Score = 85.7 bits (43), Expect = 4e-14
Identities = 52/55 (94%)
Strand = Plus / Minus
Query: 41 gacaccatggtcagctcgtgttgtggctccgtctgctctgaccagggctgtggcc 95
|||||||||||||||||||||||||||||||||||||| |||| | |||||||||
Sbjct: 21624421 gacaccatggtcagctcgtgttgtggctccgtctgctcggacctgagctgtggcc 21624367
Score = 81.8 bits (41), Expect = 7e-13
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 206 tgctgcatctccagcggctgcaggccccaatgctgccagtctgtgtgctgccagcccacc 265
||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||| ||
Sbjct: 21599134 tgctgcatctctagctgctgcaggccccaatgctgccagtcctcgtgctgccagccctcc 21599075
Query: 266 tgctg 270
|||||
Sbjct: 21599074 tgctg 21599070
Score = 79.8 bits (40), Expect = 3e-12
Identities = 73/84 (86%)
Strand = Plus / Minus
Query: 236 tgctgccagtctgtgtgctgccagcccacctgctgccgccccagatgctgcatctctagc 295
||||||||||||||||||||||||||||| ||||||| || || |||||| | | | |
Sbjct: 21624286 tgctgccagtctgtgtgctgccagcccacttgctgccaccgcacctgctgccgccccatc 21624227
Query: 296 tgctgcaggcccccgtgctgccag 319
||||||||||||| ||||||||||
Sbjct: 21624226 tgctgcaggccccggtgctgccag 21624203
Score = 71.9 bits (36), Expect = 6e-10
Identities = 63/72 (87%)
Strand = Plus / Minus
Query: 236 tgctgccagtctgtgtgctgccagcccacctgctgccgccccagatgctgcatctctagc 295
||||||||||||||||||| ||||||||| ||||||||||||| |||||| | | | |
Sbjct: 21616793 tgctgccagtctgtgtgctcccagcccacttgctgccgccccatctgctgccaccccatc 21616734
Query: 296 tgctgcaggccc 307
||||||||||||
Sbjct: 21616733 tgctgcaggccc 21616722
Score = 67.9 bits (34), Expect = 1e-08
Identities = 124/154 (80%)
Strand = Plus / Minus
Query: 191 tgctgccgccccagatgctgcatctccagcggctgcaggccccaatgctgccagtctgtg 250
||||||||||| || |||| ||| |||||| ||||||||||||| ||||||||| |
Sbjct: 21624121 tgctgccgccctagctgctacatttccagctgctgcaggccccagtgctgccagaccacc 21624062
Query: 251 tgctgccagcccacctgctgccgccccagatgctgcatctctagctgctgcaggcccccg 310
|||||| | |||| || || ||||| |||| | |||| ||||| |||||||||||
Sbjct: 21624061 tgctgcaggaccacttgtgtccaacccaggtgctacctctccagctgttgcaggccccct 21624002
Query: 311 tgctgccagtcctcgtgctgccagccctcctgct 344
||||||||||| ||||||||||||| ||||||
Sbjct: 21624001 tgctgccagtctgtgtgctgccagcccacctgct 21623968
Score = 63.9 bits (32), Expect = 2e-07
Identities = 44/48 (91%)
Strand = Plus / Minus
Query: 265 ctgctgccgccccagatgctgcatctctagctgctgcaggcccccgtg 312
||||||| | ||||| ||||||||||||||| ||||||||||||||||
Sbjct: 21616557 ctgctgcaggcccagctgctgcatctctagcggctgcaggcccccgtg 21616510
>gb|GL894226.1| Sus scrofa unplaced genomic scaffold chrU_scaffold2912
Length = 14887
Score = 210 bits (106), Expect = 1e-51
Identities = 115/118 (97%)
Strand = Plus / Plus
Query: 227 aggccccaatgctgccagtctgtgtgctgccagcccacctgctgccgccccagatgctgc 286
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1624 aggcctcaatgctgccagtctgtgtgctgccagcccacctgctgccgccccagatgctgc 1683
Query: 287 atctctagctgctgcaggcccccgtgctgccagtcctcgtgctgccagccctcctgct 344
|||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||
Sbjct: 1684 atctctagctgctgcaggcccctgtgctgccagtcctcatgctgccagccctcctgct 1741
Score = 97.6 bits (49), Expect = 1e-17
Identities = 76/85 (89%)
Strand = Plus / Plus
Query: 186 ccacctgctgccgccccagatgctgcatctccagcggctgcaggccccaatgctgccagt 245
||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||||
Sbjct: 1658 ccacctgctgccgccccagatgctgcatctctagctgctgcaggcccctgtgctgccagt 1717
Query: 246 ctgtgtgctgccagcccacctgctg 270
| |||||||||||| |||||||
Sbjct: 1718 cctcatgctgccagccctcctgctg 1742
Score = 73.8 bits (37), Expect = 2e-10
Identities = 44/45 (97%), Gaps = 1/45 (2%)
Strand = Plus / Plus
Query: 1 agctcactgccctggaaac-cacccccaacctccaccctcggaca 44
||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1479 agctcactgccctggaaacgcacccccaacctccaccctcggaca 1523
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 25,922,741
Number of extensions: 373
Number of successful extensions: 373
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 352
Number of HSP's successfully gapped: 39
Length of query: 979
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 958
Effective length of database: 2,808,413,156
Effective search space: 2690459803448
Effective search space used: 2690459803448
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 29 (58.0 bits)