Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-003773
(1024 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001179780.1| iduronate 2-sulfatase [Bos taurus]. 464 e-131
Alignment gi|XP_002699678.1| PREDICTED: iduronate 2-sulfatase [Bos taurus]. 464 e-131
Alignment gi|NP_001091457.1| arylsulfatase E [Bos taurus]. 70 2e-12
Alignment gi|XP_002700471.1| PREDICTED: arylsulfatase D-like [Bos taurus]. 70 2e-12
Alignment gi|XP_594649.4| PREDICTED: arylsulfatase D-like, partial [Bos t... 70 2e-12
Alignment gi|XP_002700470.1| PREDICTED: arylsulfatase H-like [Bos taurus]. 68 1e-11
Alignment gi|XP_601995.4| PREDICTED: arylsulfatase H-like, partial [Bos t... 68 1e-11
Alignment gi|NP_001068862.1| steryl-sulfatase [Bos taurus]. 65 7e-11
Alignment gi|NP_001068673.1| arylsulfatase A precursor [Bos taurus]. 63 5e-10
Alignment gi|NP_001193258.1| N-acetylgalactosamine-6-sulfatase [Bos tauru... 62 6e-10
>ref|NP_001179780.1| iduronate 2-sulfatase [Bos taurus].
Length = 547
Score = 464 bits (1195), Expect = e-131
Identities = 217/237 (91%), Positives = 229/237 (96%)
Frame = +1
Query: 268 ATDALNVLLIIVDDLRPSLGCYGDKLVRSPNIDQLASHSLLFQNAFAQQAVCAPSRVSFL 447
ATD LNVLLIIVDDLRPSLGCYG+KL+RSPNIDQLAS SLLFQNAFAQQAVCAPSRVSFL
Sbjct: 30 ATDPLNVLLIIVDDLRPSLGCYGNKLIRSPNIDQLASRSLLFQNAFAQQAVCAPSRVSFL 89
Query: 448 TGRRPDTTRLYDFNSYWRAHAGNFSTIPQYFKQNGYVTVSVGKVFHPGISSNHSDDSPYS 627
TGRRPDTTRLYDFNSYWR HAGNFSTIPQYFK+NGYVT+SVGKVFHPGISSNHSDDSPYS
Sbjct: 90 TGRRPDTTRLYDFNSYWRVHAGNFSTIPQYFKENGYVTMSVGKVFHPGISSNHSDDSPYS 149
Query: 628 WSLPPYHPSSEKYENTKTCKGPDGELHANLLCPVDVAEVPEGTLPDKQSTERAIQLLEKL 807
WS+PPYHPSSEKYENTKTC+GPDGELHANLLCPVDV +VPEGTLPDKQSTE+AIQLL K+
Sbjct: 150 WSVPPYHPSSEKYENTKTCRGPDGELHANLLCPVDVVDVPEGTLPDKQSTEQAIQLLGKM 209
Query: 808 RTSAVPFFLAVGYHKPHIPFRYPQEFQKLYPLENVTLAPDPQVPAGLPPVAYNPWMD 978
+TSA PFFLAVGYHKPHIPFRYP+EFQKLYPLENV+LAPDPQVP GLP VAYNPWMD
Sbjct: 210 KTSASPFFLAVGYHKPHIPFRYPKEFQKLYPLENVSLAPDPQVPTGLPLVAYNPWMD 266
>ref|XP_002699678.1| PREDICTED: iduronate 2-sulfatase [Bos taurus].
Length = 561
Score = 464 bits (1195), Expect = e-131
Identities = 217/237 (91%), Positives = 229/237 (96%)
Frame = +1
Query: 268 ATDALNVLLIIVDDLRPSLGCYGDKLVRSPNIDQLASHSLLFQNAFAQQAVCAPSRVSFL 447
ATD LNVLLIIVDDLRPSLGCYG+KL+RSPNIDQLAS SLLFQNAFAQQAVCAPSRVSFL
Sbjct: 30 ATDPLNVLLIIVDDLRPSLGCYGNKLIRSPNIDQLASRSLLFQNAFAQQAVCAPSRVSFL 89
Query: 448 TGRRPDTTRLYDFNSYWRAHAGNFSTIPQYFKQNGYVTVSVGKVFHPGISSNHSDDSPYS 627
TGRRPDTTRLYDFNSYWR HAGNFSTIPQYFK+NGYVT+SVGKVFHPGISSNHSDDSPYS
Sbjct: 90 TGRRPDTTRLYDFNSYWRVHAGNFSTIPQYFKENGYVTMSVGKVFHPGISSNHSDDSPYS 149
Query: 628 WSLPPYHPSSEKYENTKTCKGPDGELHANLLCPVDVAEVPEGTLPDKQSTERAIQLLEKL 807
WS+PPYHPSSEKYENTKTC+GPDGELHANLLCPVDV +VPEGTLPDKQSTE+AIQLL K+
Sbjct: 150 WSVPPYHPSSEKYENTKTCRGPDGELHANLLCPVDVVDVPEGTLPDKQSTEQAIQLLGKM 209
Query: 808 RTSAVPFFLAVGYHKPHIPFRYPQEFQKLYPLENVTLAPDPQVPAGLPPVAYNPWMD 978
+TSA PFFLAVGYHKPHIPFRYP+EFQKLYPLENV+LAPDPQVP GLP VAYNPWMD
Sbjct: 210 KTSASPFFLAVGYHKPHIPFRYPKEFQKLYPLENVSLAPDPQVPTGLPLVAYNPWMD 266
>ref|NP_001091457.1| arylsulfatase E [Bos taurus].
Length = 583
Score = 70.5 bits (171), Expect = 2e-12
Identities = 43/120 (35%), Positives = 62/120 (51%), Gaps = 9/120 (7%)
Frame = +1
Query: 283 NVLLIIVDDLR-PSLGCYGDKLVRSPNIDQLASHSLLFQNAFAQQAVCAPSRVSFLTGRR 459
N+LL++ DDL +GCYG+ +R+PNID+LA+ + A +C PSR +FLTGR
Sbjct: 35 NILLLMADDLGIGDVGCYGNTTIRTPNIDRLAADGVRLTQHLAAAPLCTPSRAAFLTGRY 94
Query: 460 PDTTRLYDFNS----YWRAHAGNFS----TIPQYFKQNGYVTVSVGKVFHPGISSNHSDD 615
P + + W A +G T + K GY T +GK +H G+S DD
Sbjct: 95 PLRSGMVSSQGLRVLQWTAVSGGLPPSEITFAKILKAKGYTTGLIGK-WHLGLSCASPDD 153
>ref|XP_002700471.1| PREDICTED: arylsulfatase D-like [Bos taurus].
Length = 380
Score = 70.5 bits (171), Expect = 2e-12
Identities = 44/124 (35%), Positives = 65/124 (52%), Gaps = 9/124 (7%)
Frame = +1
Query: 271 TDALNVLLIIVDDLR-PSLGCYGDKLVRSPNIDQLASHSLLFQNAFAQQAVCAPSRVSFL 447
T N+LLI+ DDL LGCYG+ +R+PNID+LA + A +C PSR +FL
Sbjct: 38 TSKPNILLIMADDLGIGDLGCYGNDTLRTPNIDRLAEEGVRLTQHLAAAPLCTPSRAAFL 97
Query: 448 TGRRPDTTRLYDFNSY----WRAHAG----NFSTIPQYFKQNGYVTVSVGKVFHPGISSN 603
TGR + + + Y W A +G N +T + + GY T +GK +H G++
Sbjct: 98 TGRHAFRSGMDATDRYRALQWNAGSGGLPQNETTFARILQGQGYTTGLIGK-WHQGVNCA 156
Query: 604 HSDD 615
+D
Sbjct: 157 SRND 160
>ref|XP_594649.4| PREDICTED: arylsulfatase D-like, partial [Bos taurus].
Length = 432
Score = 70.5 bits (171), Expect = 2e-12
Identities = 44/124 (35%), Positives = 65/124 (52%), Gaps = 9/124 (7%)
Frame = +1
Query: 271 TDALNVLLIIVDDLR-PSLGCYGDKLVRSPNIDQLASHSLLFQNAFAQQAVCAPSRVSFL 447
T N+LLI+ DDL LGCYG+ +R+PNID+LA + A +C PSR +FL
Sbjct: 38 TSKPNILLIMADDLGIGDLGCYGNDTLRTPNIDRLAEEGVRLTQHLAAAPLCTPSRAAFL 97
Query: 448 TGRRPDTTRLYDFNSY----WRAHAG----NFSTIPQYFKQNGYVTVSVGKVFHPGISSN 603
TGR + + + Y W A +G N +T + + GY T +GK +H G++
Sbjct: 98 TGRHAFRSGMDATDRYRALQWNAGSGGLPQNETTFARILQGQGYTTGLIGK-WHQGVNCA 156
Query: 604 HSDD 615
+D
Sbjct: 157 SRND 160
>ref|XP_002700470.1| PREDICTED: arylsulfatase H-like [Bos taurus].
Length = 660
Score = 67.8 bits (164), Expect = 1e-11
Identities = 43/124 (34%), Positives = 65/124 (52%), Gaps = 10/124 (8%)
Frame = +1
Query: 283 NVLLIIVDDLRPS-LGCYGDKLVRSPNIDQLASHSLLFQNAFAQQAVCAPSRVSFLTGRR 459
N++L++ DDL L CYG+ V +PNID+LAS + A ++C PSR +FLTGR
Sbjct: 80 NIVLLMADDLGVGDLCCYGNNSVSTPNIDRLASEGVRLTQHLAAASMCTPSRAAFLTGRY 139
Query: 460 PDTTRLYDFNS-----YWRAHAG----NFSTIPQYFKQNGYVTVSVGKVFHPGISSNHSD 612
P + + ++ W +G N +T + + GY T +GK +H G+S D
Sbjct: 140 PVRSGMASSSNLNRDVVWLGGSGGLPPNETTFAKLLQHRGYRTGLIGK-WHQGLSCASRD 198
Query: 613 DSPY 624
D Y
Sbjct: 199 DHCY 202
>ref|XP_601995.4| PREDICTED: arylsulfatase H-like, partial [Bos taurus].
Length = 326
Score = 67.8 bits (164), Expect = 1e-11
Identities = 43/124 (34%), Positives = 65/124 (52%), Gaps = 10/124 (8%)
Frame = +1
Query: 283 NVLLIIVDDLRPS-LGCYGDKLVRSPNIDQLASHSLLFQNAFAQQAVCAPSRVSFLTGRR 459
N++L++ DDL L CYG+ V +PNID+LAS + A ++C PSR +FLTGR
Sbjct: 35 NIVLLMADDLGVGDLCCYGNNSVSTPNIDRLASEGVRLTQHLAAASMCTPSRAAFLTGRY 94
Query: 460 PDTTRLYDFNS-----YWRAHAG----NFSTIPQYFKQNGYVTVSVGKVFHPGISSNHSD 612
P + + ++ W +G N +T + + GY T +GK +H G+S D
Sbjct: 95 PVRSGMASSSNLNRDVVWLGGSGGLPPNETTFAKLLQHRGYRTGLIGK-WHQGLSCASRD 153
Query: 613 DSPY 624
D Y
Sbjct: 154 DHCY 157
>ref|NP_001068862.1| steryl-sulfatase [Bos taurus].
Length = 578
Score = 65.5 bits (158), Expect = 7e-11
Identities = 48/158 (30%), Positives = 75/158 (47%), Gaps = 17/158 (10%)
Frame = +1
Query: 283 NVLLIIVDDLR-PSLGCYGDKLVRSPNIDQLASHSLLFQNAFAQQAVCAPSRVSFLTGRR 459
N +L++ DDL GCYG+K +R+PNID+LA + A +C PSR +F+TGR
Sbjct: 23 NFVLLMADDLGIGDPGCYGNKTLRTPNIDRLARGGVKLTQHLAASPLCTPSRAAFMTGRY 82
Query: 460 PDTTRLYDFNS----YWRAHAGNFS----TIPQYFKQNGYVTVSVGKVFHPGISSNHSDD 615
P + + + + A +G T + K GY T +GK +H GIS + D
Sbjct: 83 PVRSGMASQSQVGVFLFSASSGGLPPSEITFAKLLKDQGYSTALIGK-WHLGISCHDPGD 141
Query: 616 SPYSWSLPPYHPSSEKYE--------NTKTCKGPDGEL 705
+HP+S ++ N + CK +G +
Sbjct: 142 F-------CHHPTSHGFDYFHGLPLTNMRDCKLGEGSV 172
>ref|NP_001068673.1| arylsulfatase A precursor [Bos taurus].
Length = 507
Score = 62.8 bits (151), Expect = 5e-10
Identities = 68/228 (29%), Positives = 92/228 (40%), Gaps = 27/228 (11%)
Frame = +1
Query: 283 NVLLIIVDDLR-PSLGCYGDKLVRSPNIDQLASHSLLFQNAFAQQAVCAPSRVSFLTGRR 459
N+LLI DDL LG YG +PN+DQLA+ L F + + ++C PSR + LTGR
Sbjct: 22 NILLIFADDLGYGDLGSYGHPSSTTPNLDQLAAGGLRFTDFYVPVSLCTPSRAALLTGRL 81
Query: 460 PDTTRLYDFNSYWRAHAG---NFSTIPQYFKQNGYVTVSVGKVFHPGISSNHSDDSPYSW 630
P LY + G + T+ + GY+T GK +H G+ P
Sbjct: 82 PVRMGLYPGVLEPSSRGGLPLDEVTLAEVLAAQGYLTGIAGK-WHLGV-------GPEGA 133
Query: 631 SLPPYH--------PSSEK---------YENTKTCKG--PDGELHANLLCPVDVAEVPEG 753
LPP+H P S + C+G G + LL + V P
Sbjct: 134 FLPPHHGFHRFLGIPYSHDQGPCQNLTCFPPATPCEGICDQGLVPIPLLANLSVEAQPP- 192
Query: 754 TLPDKQSTERAIQLLEKLRTSAV----PFFLAVGYHKPHIPFRYPQEF 885
LP ++ R + L T A PFFL H H P Q F
Sbjct: 193 WLPGLEA--RYVAFARDLMTDAQHQGRPFFLYYASHHTHYPQFSGQSF 238
>ref|NP_001193258.1| N-acetylgalactosamine-6-sulfatase [Bos taurus].
Length = 522
Score = 62.4 bits (150), Expect = 6e-10
Identities = 41/124 (33%), Positives = 59/124 (47%), Gaps = 22/124 (17%)
Frame = +1
Query: 283 NVLLIIVDDLR-PSLGCYGDKLVRSPNIDQLASHSLLFQNAFAQQAVCAPSRVSFLTGRR 459
N+LL+++DD+ LG YG+ +PN+D++A +LF N + +C+PSR + LTGR
Sbjct: 31 NILLLLMDDMGWGDLGVYGEPSRETPNLDRMAVEGMLFPNFYTANPLCSPSRAALLTGRL 90
Query: 460 PDTTRLYDFNSYWRAHAGNFST--------------IPQYFKQNGYVTVSVGK------- 576
P + Y N HA N T +P K GY + VGK
Sbjct: 91 PIRSGFYTTN----GHARNAYTPQEIVGGIPDSELLLPALLKGAGYASKIVGKWHLGHRP 146
Query: 577 VFHP 588
FHP
Sbjct: 147 QFHP 150
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 39,322,509
Number of extensions: 1157093
Number of successful extensions: 6182
Number of sequences better than 1.0e-05: 15
Number of HSP's gapped: 6141
Number of HSP's successfully gapped: 15
Length of query: 341
Length of database: 17,681,374
Length adjustment: 103
Effective length of query: 238
Effective length of database: 14,273,310
Effective search space: 3397047780
Effective search space used: 3397047780
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-003773
(1024 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001041590.1| iduronate 2-sulfatase [Canis lupus familiari... 468 e-132
Alignment gi|NP_001041587.1| arylsulfatase E [Canis lupus familiaris]. 78 1e-14
Alignment gi|XP_548838.2| PREDICTED: similar to arylsulfatase D isoform a... 73 4e-13
Alignment gi|XP_852349.1| PREDICTED: similar to arylsulfatase F precursor... 72 9e-13
Alignment gi|NP_001041588.1| arylsulfatase H [Canis lupus familiaris]. 68 2e-11
Alignment gi|NP_001041585.1| N-acetylgalactosamine-6-sulfatase precursor ... 65 8e-11
Alignment gi|NP_001041548.1| arylsulfatase A [Canis lupus familiaris]. 65 1e-10
Alignment gi|XP_548847.2| PREDICTED: similar to Steryl-sulfatase precurso... 62 9e-10
Alignment gi|NP_001003114.1| N-sulphoglucosamine sulphohydrolase [Canis l... 57 3e-08
Alignment gi|NP_001041563.1| arylsulfatase G precursor [Canis lupus famil... 57 4e-08
>ref|NP_001041590.1| iduronate 2-sulfatase [Canis lupus familiaris].
Length = 554
Score = 468 bits (1203), Expect = e-132
Identities = 216/238 (90%), Positives = 231/238 (97%)
Frame = +1
Query: 265 VATDALNVLLIIVDDLRPSLGCYGDKLVRSPNIDQLASHSLLFQNAFAQQAVCAPSRVSF 444
+ T LNVLLIIVDDLRPSLGCYGDKLVRSPNIDQLASHSLLFQNAFAQQAVCAPSRVSF
Sbjct: 30 LTTAPLNVLLIIVDDLRPSLGCYGDKLVRSPNIDQLASHSLLFQNAFAQQAVCAPSRVSF 89
Query: 445 LTGRRPDTTRLYDFNSYWRAHAGNFSTIPQYFKQNGYVTVSVGKVFHPGISSNHSDDSPY 624
LTGRRPDTTRLYDFNSYWR HAGNFST+PQYFK+NGYVT+SVGKVFHPGISSN+SDDSPY
Sbjct: 90 LTGRRPDTTRLYDFNSYWRVHAGNFSTLPQYFKENGYVTMSVGKVFHPGISSNYSDDSPY 149
Query: 625 SWSLPPYHPSSEKYENTKTCKGPDGELHANLLCPVDVAEVPEGTLPDKQSTERAIQLLEK 804
SWS+PPYHPSSEKYENTKTC+GPDGELHANLLCPVD+A+VPEGTLPDKQSTE+AI+LLEK
Sbjct: 150 SWSIPPYHPSSEKYENTKTCRGPDGELHANLLCPVDIADVPEGTLPDKQSTEQAIRLLEK 209
Query: 805 LRTSAVPFFLAVGYHKPHIPFRYPQEFQKLYPLENVTLAPDPQVPAGLPPVAYNPWMD 978
+TS PFFLAVGYHKPHIPFRYP+EFQKLYPLEN+TLAPDP+VPAGLPPVAYNPWMD
Sbjct: 210 TKTSTRPFFLAVGYHKPHIPFRYPKEFQKLYPLENITLAPDPEVPAGLPPVAYNPWMD 267
>ref|NP_001041587.1| arylsulfatase E [Canis lupus familiaris].
Length = 585
Score = 78.2 bits (191), Expect = 1e-14
Identities = 44/120 (36%), Positives = 66/120 (55%), Gaps = 9/120 (7%)
Frame = +1
Query: 283 NVLLIIVDDLR-PSLGCYGDKLVRSPNIDQLASHSLLFQNAFAQQAVCAPSRVSFLTGRR 459
N+LL++ DD +GCYG+ +R+PNID+LA ++ A +VC PSR +FLTGR
Sbjct: 35 NILLLMADDFGIGDIGCYGNNSIRTPNIDRLAEDGVMLTQHIAAASVCTPSRAAFLTGRY 94
Query: 460 PDTTRLYDFNSY----WRAHAG----NFSTIPQYFKQNGYVTVSVGKVFHPGISSNHSDD 615
P + + N Y W +G N +T + K GY T +GK +H G++ S+D
Sbjct: 95 PLRSGMVSSNGYRVLQWTGVSGGLPTNETTFAKILKDRGYATGLIGK-WHLGLNCESSND 153
>ref|XP_548838.2| PREDICTED: similar to arylsulfatase D isoform a precursor [Canis
familiaris].
Length = 639
Score = 73.2 bits (178), Expect = 4e-13
Identities = 44/120 (36%), Positives = 63/120 (52%), Gaps = 9/120 (7%)
Frame = +1
Query: 283 NVLLIIVDDLR-PSLGCYGDKLVRSPNIDQLASHSLLFQNAFAQQAVCAPSRVSFLTGRR 459
N+LLI+ DDL LGCYG+ +R+PNID+LA + A +C PSR SFLTGR
Sbjct: 87 NILLIMADDLGIGDLGCYGNSTLRTPNIDRLAEEGVRLTQHLAAAPLCTPSRSSFLTGRH 146
Query: 460 PDTTRLYDFNSY----WRAHAG----NFSTIPQYFKQNGYVTVSVGKVFHPGISSNHSDD 615
+ + + Y W +G N +T + +Q GY T +GK +H G++ D
Sbjct: 147 SFRSGMEAHDGYRALQWNGASGGLPENETTFARILQQQGYATGLIGK-WHQGVNCESRTD 205
>ref|XP_852349.1| PREDICTED: similar to arylsulfatase F precursor [Canis familiaris].
Length = 704
Score = 72.0 bits (175), Expect = 9e-13
Identities = 51/144 (35%), Positives = 75/144 (52%), Gaps = 10/144 (6%)
Frame = +1
Query: 265 VATDALNVLLIIVDDLR-PSLGCYGDKLVRSPNIDQLASHSLLFQNAFAQQAVCAPSRVS 441
V D N++L++VDDL LGC+G+ +R+PNID+LA + + A ++C PSR +
Sbjct: 145 VHDDKPNIVLMMVDDLGIGDLGCFGNDTIRTPNIDRLAREGVQLNHHIAAASMCTPSRAA 204
Query: 442 FLTGRRPDTTRLYDFNSYWR------AHAG---NFSTIPQYFKQNGYVTVSVGKVFHPGI 594
FLTGR P + + N+ R A AG N +T K+ GY T +GK +H G+
Sbjct: 205 FLTGRYPIRSGMVS-NAVDRVIITLGAPAGLPHNETTFAALLKKQGYSTALIGK-WHQGL 262
Query: 595 SSNHSDDSPYSWSLPPYHPSSEKY 666
+ S Y PYH + Y
Sbjct: 263 NC----QSRYDQCHHPYHYGFDYY 282
>ref|NP_001041588.1| arylsulfatase H [Canis lupus familiaris].
Length = 562
Score = 67.8 bits (164), Expect = 2e-11
Identities = 45/124 (36%), Positives = 66/124 (53%), Gaps = 10/124 (8%)
Frame = +1
Query: 283 NVLLIIVDDLRPS-LGCYGDKLVRSPNIDQLASHSLLFQNAFAQQAVCAPSRVSFLTGRR 459
N++L++ DDL L CYG+ V +PNID+LAS + A +VC PSR +FLTGR
Sbjct: 8 NIVLLMADDLGVGDLCCYGNNTVSTPNIDRLASEGVRLTQHLAAASVCTPSRAAFLTGRY 67
Query: 460 PDTTRL---YDFNS--YWRAHAG----NFSTIPQYFKQNGYVTVSVGKVFHPGISSNHSD 612
P + + Y+ N W +G N +T + + GY T +GK +H G+S +
Sbjct: 68 PIRSGMASPYNLNRGLTWLGGSGGLPTNETTFAKLLQHYGYRTGLIGK-WHQGLSCASRN 126
Query: 613 DSPY 624
D Y
Sbjct: 127 DHCY 130
>ref|NP_001041585.1| N-acetylgalactosamine-6-sulfatase precursor [Canis lupus
familiaris].
Length = 522
Score = 65.5 bits (158), Expect = 8e-11
Identities = 41/124 (33%), Positives = 63/124 (50%), Gaps = 22/124 (17%)
Frame = +1
Query: 283 NVLLIIVDDLR-PSLGCYGDKLVRSPNIDQLASHSLLFQNAFAQQAVCAPSRVSFLTGRR 459
N+LL+++DD+ LG YG+ +PN+D++A+ +LF + ++ +C+PSR + LTGR
Sbjct: 31 NILLLLMDDMGWGDLGIYGEPSRETPNLDRMAAEGMLFPSFYSANPLCSPSRAALLTGRL 90
Query: 460 PDTTRLYDFNSYWRAHAGNFST--------------IPQYFKQNGYVTVSVGK------- 576
P Y N HA N T +P+ K+ GYV+ VGK
Sbjct: 91 PIRNGFYTTN----RHARNAYTPQEIVGGIPDQEHVLPELLKEAGYVSKIVGKWHLGHRP 146
Query: 577 VFHP 588
FHP
Sbjct: 147 QFHP 150
>ref|NP_001041548.1| arylsulfatase A [Canis lupus familiaris].
Length = 507
Score = 65.1 bits (157), Expect = 1e-10
Identities = 62/213 (29%), Positives = 91/213 (42%), Gaps = 19/213 (8%)
Frame = +1
Query: 283 NVLLIIVDDLR-PSLGCYGDKLVRSPNIDQLASHSLLFQNAFAQQAVCAPSRVSFLTGRR 459
N++LI DDL LGCYG +PN+DQLA+ L F + + ++C PSR + LTGR
Sbjct: 22 NIVLIFADDLGYGDLGCYGHPSSATPNLDQLAAGGLRFTDFYVPTSLCTPSRAALLTGRL 81
Query: 460 PDTTRLYDFNSYWRAHAG---NFSTIPQYFKQNGYVTVSVGKVFHPGISSNHSDDSPYS- 627
P LY + G T+ + GY+T GK +H G+ + + P+
Sbjct: 82 PVRMGLYPGVLEPGSRGGLPLEEVTLAEVLAARGYLTGIAGK-WHLGVGPDGAFLPPHQG 140
Query: 628 ---WSLPPYHPSSEKYENTKTCKGP----DGELHANLLCPVDV-----AEVPEGTLPDKQ 771
+ PY +N TC P DG L+ P+ + E LP +
Sbjct: 141 FHRFLGIPYSHDQGPCQNL-TCFPPSTPCDGSCDQGLV-PIPLLANLSVEAQPPWLPGLE 198
Query: 772 STERAI--QLLEKLRTSAVPFFLAVGYHKPHIP 864
+ A L+ + +PFFL H H P
Sbjct: 199 ARYVAFARDLMADAQRQGLPFFLYYASHHTHYP 231
>ref|XP_548847.2| PREDICTED: similar to Steryl-sulfatase precursor (Steroid
sulfatase) (Steryl-sulfate sulfohydrolase)
(Arylsulfatase C) (ASC) [Canis familiaris].
Length = 617
Score = 62.0 bits (149), Expect = 9e-10
Identities = 44/153 (28%), Positives = 72/153 (47%), Gaps = 12/153 (7%)
Frame = +1
Query: 283 NVLLIIVDDLR-PSLGCYGDKLVRSPNIDQLASHSLLFQNAFAQQAVCAPSRVSFLTGRR 459
N +L++ DDL GCYG+ +R+PNID+LA+ + A +C PSR +F+TGR
Sbjct: 23 NFVLLMADDLGIGDPGCYGNTTLRTPNIDRLAAEGVKLTQHLAASPLCTPSRAAFMTGRY 82
Query: 460 PDTTRL--------YDFNSYWRAHAGNFSTIPQYFKQNGYVTVSVGKVFHPGISSNHSDD 615
P + + + F++ + T + K GY T +GK +H G + ++ D
Sbjct: 83 PIRSGMASQSFIGVFIFSASSGGLPTSEITFAKLLKNQGYSTALIGK-WHLGTNCHNKTD 141
Query: 616 ---SPYSWSLPPYHPSSEKYENTKTCKGPDGEL 705
P S +H N + CK +G +
Sbjct: 142 FCHHPLSHGFDYFH--GIPVTNLRDCKPGEGSV 172
>ref|NP_001003114.1| N-sulphoglucosamine sulphohydrolase [Canis lupus familiaris].
Length = 507
Score = 57.0 bits (136), Expect = 3e-08
Identities = 36/105 (34%), Positives = 52/105 (49%), Gaps = 7/105 (6%)
Frame = +1
Query: 283 NVLLIIVDDLRPSLGCYGDKLVRSPNIDQLASHSLLFQNAFAQQAVCAPSRVSFLTGRRP 462
NVLLI+ DD G Y + + +P++D LA SL+F+NAF + C+PSR S LTG
Sbjct: 29 NVLLIVADDGGFESGAYNNTAISTPHLDALARRSLVFRNAFTTVSSCSPSRASLLTGLPQ 88
Query: 463 DTTRLY-------DFNSYWRAHAGNFSTIPQYFKQNGYVTVSVGK 576
+Y FNS+ ++P + G T +GK
Sbjct: 89 HQNGMYGLHQDVHHFNSF-----DGVRSLPLLLGRAGVRTGIIGK 128
>ref|NP_001041563.1| arylsulfatase G precursor [Canis lupus familiaris].
Length = 535
Score = 56.6 bits (135), Expect = 4e-08
Identities = 60/224 (26%), Positives = 95/224 (42%), Gaps = 25/224 (11%)
Frame = +1
Query: 283 NVLLIIVDDLR-PSLGCYGDKLVRSPNIDQLASHSLLFQNAFAQQAVCAPSRVSFLTGR- 456
N ++I+ DD+ LG + + N+D++A+ + F + A + C+PSR S LTGR
Sbjct: 37 NFVIILADDMGWGDLGANWAETKDTANLDKMAAEGMRFVDFHAAASTCSPSRASLLTGRL 96
Query: 457 --RPDTTRLYDFNSYWRAHAGNFSTIPQYFKQNGYVTVSVGK--VFHPGISSNHSDDSPY 624
R T + S N +T+ + +Q GYVT +GK + H G + Y
Sbjct: 97 GLRNGVTHNFAVTSVGGLPL-NETTLAEVLQQAGYVTGMIGKWHLGHHGPYHPNFRGFDY 155
Query: 625 SWSLPPYH----PSSEKYENTKTCKGPDGELHANLL---CPVDVA------------EVP 747
+ +P H + Y + P G+ + L C DVA V
Sbjct: 156 YFGIPYSHDMGCTDTPGYNHPPCPACPRGDRPSRSLERDCYTDVALPLYENLNIVEQPVN 215
Query: 748 EGTLPDKQSTERAIQLLEKLRTSAVPFFLAVGYHKPHIPFRYPQ 879
+L K + E+AIQ ++ S PF L +G H+P Q
Sbjct: 216 LSSLAHKYA-EKAIQFIQHASASGRPFLLYMGLAHMHVPISRTQ 258
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 40,897,213
Number of extensions: 1171513
Number of successful extensions: 6252
Number of sequences better than 1.0e-05: 13
Number of HSP's gapped: 6182
Number of HSP's successfully gapped: 13
Length of query: 341
Length of database: 18,874,504
Length adjustment: 103
Effective length of query: 238
Effective length of database: 15,440,896
Effective search space: 3674933248
Effective search space used: 3674933248
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-003773
(1024 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_006114.1| iduronate 2-sulfatase isoform b precursor [Homo... 474 e-134
Alignment gi|NP_000193.1| iduronate 2-sulfatase isoform a precursor [Homo... 474 e-134
Alignment gi|NP_001160022.1| iduronate 2-sulfatase isoform c [Homo sapien... 355 3e-98
Alignment gi|NP_001660.2| arylsulfatase D precursor [Homo sapiens]. 77 3e-14
Alignment gi|NP_000038.2| arylsulfatase E precursor [Homo sapiens]. 72 8e-13
Alignment gi|NP_000342.2| steryl-sulfatase precursor [Homo sapiens]. 70 3e-12
Alignment gi|NP_000503.1| N-acetylgalactosamine-6-sulfatase precursor [Ho... 70 4e-12
Alignment gi|NP_001188468.1| arylsulfatase F precursor [Homo sapiens]. 69 7e-12
Alignment gi|NP_001188467.1| arylsulfatase F precursor [Homo sapiens]. 69 7e-12
Alignment gi|NP_004033.2| arylsulfatase F precursor [Homo sapiens]. 69 7e-12
>ref|NP_006114.1| iduronate 2-sulfatase isoform b precursor [Homo sapiens].
Length = 343
Score = 474 bits (1220), Expect = e-134
Identities = 220/236 (93%), Positives = 231/236 (97%)
Frame = +1
Query: 271 TDALNVLLIIVDDLRPSLGCYGDKLVRSPNIDQLASHSLLFQNAFAQQAVCAPSRVSFLT 450
TDALNVLLIIVDDLRPSLGCYGDKLVRSPNIDQLASHSLLFQNAFAQQAVCAPSRVSFLT
Sbjct: 34 TDALNVLLIIVDDLRPSLGCYGDKLVRSPNIDQLASHSLLFQNAFAQQAVCAPSRVSFLT 93
Query: 451 GRRPDTTRLYDFNSYWRAHAGNFSTIPQYFKQNGYVTVSVGKVFHPGISSNHSDDSPYSW 630
GRRPDTTRLYDFNSYWR HAGNFSTIPQYFK+NGYVT+SVGKVFHPGISSNH+DDSPYSW
Sbjct: 94 GRRPDTTRLYDFNSYWRVHAGNFSTIPQYFKENGYVTMSVGKVFHPGISSNHTDDSPYSW 153
Query: 631 SLPPYHPSSEKYENTKTCKGPDGELHANLLCPVDVAEVPEGTLPDKQSTERAIQLLEKLR 810
S PPYHPSSEKYENTKTC+GPDGELHANLLCPVDV +VPEGTLPDKQSTE+AIQLLEK++
Sbjct: 154 SFPPYHPSSEKYENTKTCRGPDGELHANLLCPVDVLDVPEGTLPDKQSTEQAIQLLEKMK 213
Query: 811 TSAVPFFLAVGYHKPHIPFRYPQEFQKLYPLENVTLAPDPQVPAGLPPVAYNPWMD 978
TSA PFFLAVGYHKPHIPFRYP+EFQKLYPLEN+TLAPDP+VP GLPPVAYNPWMD
Sbjct: 214 TSASPFFLAVGYHKPHIPFRYPKEFQKLYPLENITLAPDPEVPDGLPPVAYNPWMD 269
>ref|NP_000193.1| iduronate 2-sulfatase isoform a precursor [Homo sapiens].
Length = 550
Score = 474 bits (1220), Expect = e-134
Identities = 220/236 (93%), Positives = 231/236 (97%)
Frame = +1
Query: 271 TDALNVLLIIVDDLRPSLGCYGDKLVRSPNIDQLASHSLLFQNAFAQQAVCAPSRVSFLT 450
TDALNVLLIIVDDLRPSLGCYGDKLVRSPNIDQLASHSLLFQNAFAQQAVCAPSRVSFLT
Sbjct: 34 TDALNVLLIIVDDLRPSLGCYGDKLVRSPNIDQLASHSLLFQNAFAQQAVCAPSRVSFLT 93
Query: 451 GRRPDTTRLYDFNSYWRAHAGNFSTIPQYFKQNGYVTVSVGKVFHPGISSNHSDDSPYSW 630
GRRPDTTRLYDFNSYWR HAGNFSTIPQYFK+NGYVT+SVGKVFHPGISSNH+DDSPYSW
Sbjct: 94 GRRPDTTRLYDFNSYWRVHAGNFSTIPQYFKENGYVTMSVGKVFHPGISSNHTDDSPYSW 153
Query: 631 SLPPYHPSSEKYENTKTCKGPDGELHANLLCPVDVAEVPEGTLPDKQSTERAIQLLEKLR 810
S PPYHPSSEKYENTKTC+GPDGELHANLLCPVDV +VPEGTLPDKQSTE+AIQLLEK++
Sbjct: 154 SFPPYHPSSEKYENTKTCRGPDGELHANLLCPVDVLDVPEGTLPDKQSTEQAIQLLEKMK 213
Query: 811 TSAVPFFLAVGYHKPHIPFRYPQEFQKLYPLENVTLAPDPQVPAGLPPVAYNPWMD 978
TSA PFFLAVGYHKPHIPFRYP+EFQKLYPLEN+TLAPDP+VP GLPPVAYNPWMD
Sbjct: 214 TSASPFFLAVGYHKPHIPFRYPKEFQKLYPLENITLAPDPEVPDGLPPVAYNPWMD 269
>ref|NP_001160022.1| iduronate 2-sulfatase isoform c [Homo sapiens].
Length = 460
Score = 355 bits (912), Expect = 3e-98
Identities = 159/175 (90%), Positives = 170/175 (97%)
Frame = +1
Query: 454 RRPDTTRLYDFNSYWRAHAGNFSTIPQYFKQNGYVTVSVGKVFHPGISSNHSDDSPYSWS 633
RRPDTTRLYDFNSYWR HAGNFSTIPQYFK+NGYVT+SVGKVFHPGISSNH+DDSPYSWS
Sbjct: 5 RRPDTTRLYDFNSYWRVHAGNFSTIPQYFKENGYVTMSVGKVFHPGISSNHTDDSPYSWS 64
Query: 634 LPPYHPSSEKYENTKTCKGPDGELHANLLCPVDVAEVPEGTLPDKQSTERAIQLLEKLRT 813
PPYHPSSEKYENTKTC+GPDGELHANLLCPVDV +VPEGTLPDKQSTE+AIQLLEK++T
Sbjct: 65 FPPYHPSSEKYENTKTCRGPDGELHANLLCPVDVLDVPEGTLPDKQSTEQAIQLLEKMKT 124
Query: 814 SAVPFFLAVGYHKPHIPFRYPQEFQKLYPLENVTLAPDPQVPAGLPPVAYNPWMD 978
SA PFFLAVGYHKPHIPFRYP+EFQKLYPLEN+TLAPDP+VP GLPPVAYNPWMD
Sbjct: 125 SASPFFLAVGYHKPHIPFRYPKEFQKLYPLENITLAPDPEVPDGLPPVAYNPWMD 179
>ref|NP_001660.2| arylsulfatase D precursor [Homo sapiens].
Length = 593
Score = 77.0 bits (188), Expect = 3e-14
Identities = 45/114 (39%), Positives = 64/114 (56%), Gaps = 9/114 (7%)
Frame = +1
Query: 283 NVLLIIVDDLRPS-LGCYGDKLVRSPNIDQLASHSLLFQNAFAQQAVCAPSRVSFLTGRR 459
N+LLI+ DDL LGCYG+ +R+PNIDQLA + A +C PSR +FLTGR
Sbjct: 42 NILLIMADDLGTGDLGCYGNNTLRTPNIDQLAEEGVRLTQHLAAAPLCTPSRAAFLTGRH 101
Query: 460 PDTTRLYDFNSY----WRAHAG----NFSTIPQYFKQNGYVTVSVGKVFHPGIS 597
+ + N Y W A +G N +T + +Q+GY T +GK +H G++
Sbjct: 102 SFRSGMDASNGYRALQWNAGSGGLPENETTFARILQQHGYATGLIGK-WHQGVN 154
>ref|NP_000038.2| arylsulfatase E precursor [Homo sapiens].
Length = 589
Score = 72.0 bits (175), Expect = 8e-13
Identities = 41/120 (34%), Positives = 65/120 (54%), Gaps = 9/120 (7%)
Frame = +1
Query: 283 NVLLIIVDDLR-PSLGCYGDKLVRSPNIDQLASHSLLFQNAFAQQAVCAPSRVSFLTGRR 459
N+LL++ DDL +GCYG+ +R+PNID+LA + + ++C PSR +FLTGR
Sbjct: 39 NILLLMADDLGIGDIGCYGNNTMRTPNIDRLAEDGVKLTQHISAASLCTPSRAAFLTGRY 98
Query: 460 PDTTRLYDFNSY----WRAHAG----NFSTIPQYFKQNGYVTVSVGKVFHPGISSNHSDD 615
P + + Y W +G N +T + K+ GY T +GK +H G++ + D
Sbjct: 99 PVRSGMVSSIGYRVLQWTGASGGLPTNETTFAKILKEKGYATGLIGK-WHLGLNCESASD 157
>ref|NP_000342.2| steryl-sulfatase precursor [Homo sapiens].
Length = 583
Score = 70.1 bits (170), Expect = 3e-12
Identities = 48/154 (31%), Positives = 77/154 (50%), Gaps = 13/154 (8%)
Frame = +1
Query: 283 NVLLIIVDDLR-PSLGCYGDKLVRSPNIDQLASHSLLFQNAFAQQAVCAPSRVSFLTGRR 459
N++L++ DDL GCYG+K +R+PNID+LAS + A +C PSR +F+TGR
Sbjct: 28 NIILVMADDLGIGDPGCYGNKTIRTPNIDRLASGGVKLTQHLAASPLCTPSRAAFMTGRY 87
Query: 460 PDTTRLYDFNS----YWRAHAGNFS----TIPQYFKQNGYVTVSVGKVFHPGISSNHSDD 615
P + + ++ + A +G T + K GY T +GK +H G+S + D
Sbjct: 88 PVRSGMASWSRTGVFLFTASSGGLPTDEITFAKLLKDQGYSTALIGK-WHLGMSCHSKTD 146
Query: 616 SPYSWSLPPYHPSSEKY----ENTKTCKGPDGEL 705
+ P +H + Y N + CK +G +
Sbjct: 147 FCHH---PLHHGFNYFYGISLTNLRDCKPGEGSV 177
>ref|NP_000503.1| N-acetylgalactosamine-6-sulfatase precursor [Homo sapiens].
Length = 522
Score = 69.7 bits (169), Expect = 4e-12
Identities = 44/124 (35%), Positives = 64/124 (51%), Gaps = 22/124 (17%)
Frame = +1
Query: 283 NVLLIIVDDLR-PSLGCYGDKLVRSPNIDQLASHSLLFQNAFAQQAVCAPSRVSFLTGRR 459
N+LL+++DD+ LG YG+ +PN+D++A+ LLF N ++ +C+PSR + LTGR
Sbjct: 32 NILLLLMDDMGWGDLGVYGEPSRETPNLDRMAAEGLLFPNFYSANPLCSPSRAALLTGRL 91
Query: 460 PDTTRLYDFNSYWRAHAGNFST--------------IPQYFKQNGYVTVSVGK------- 576
P Y N AHA N T +P+ K+ GYV+ VGK
Sbjct: 92 PIRNGFYTTN----AHARNAYTPQEIVGGIPDSEQLLPELLKKAGYVSKIVGKWHLGHRP 147
Query: 577 VFHP 588
FHP
Sbjct: 148 QFHP 151
>ref|NP_001188468.1| arylsulfatase F precursor [Homo sapiens].
Length = 590
Score = 68.9 bits (167), Expect = 7e-12
Identities = 46/140 (32%), Positives = 74/140 (52%), Gaps = 12/140 (8%)
Frame = +1
Query: 265 VATDALNVLLIIVDDLR-PSLGCYGDKLVRSPNIDQLASHSLLFQNAFAQQAVCAPSRVS 441
V D N++LI+VDDL LGCYG+ +R+P+ID+LA + + ++C+PSR +
Sbjct: 25 VHDDKPNIVLIMVDDLGIGDLGCYGNDTMRTPHIDRLAREGVRLTQHISAASLCSPSRSA 84
Query: 442 FLTGRRPDTTRLYDFNS-----YWRAHAG---NFSTIPQYFKQNGYVTVSVGKVFHPGIS 597
FLTGR P + + + AG N +T+ K+ GY T +GK +H G++
Sbjct: 85 FLTGRYPIRSGMVSSGNRRVIQNLAVPAGLPLNETTLAALLKKQGYSTGLIGK-WHQGLN 143
Query: 598 SNHSDDS---PYSWSLPPYH 648
+ D PY++ Y+
Sbjct: 144 CDSRSDQCHHPYNYGFDYYY 163
>ref|NP_001188467.1| arylsulfatase F precursor [Homo sapiens].
Length = 590
Score = 68.9 bits (167), Expect = 7e-12
Identities = 46/140 (32%), Positives = 74/140 (52%), Gaps = 12/140 (8%)
Frame = +1
Query: 265 VATDALNVLLIIVDDLR-PSLGCYGDKLVRSPNIDQLASHSLLFQNAFAQQAVCAPSRVS 441
V D N++LI+VDDL LGCYG+ +R+P+ID+LA + + ++C+PSR +
Sbjct: 25 VHDDKPNIVLIMVDDLGIGDLGCYGNDTMRTPHIDRLAREGVRLTQHISAASLCSPSRSA 84
Query: 442 FLTGRRPDTTRLYDFNS-----YWRAHAG---NFSTIPQYFKQNGYVTVSVGKVFHPGIS 597
FLTGR P + + + AG N +T+ K+ GY T +GK +H G++
Sbjct: 85 FLTGRYPIRSGMVSSGNRRVIQNLAVPAGLPLNETTLAALLKKQGYSTGLIGK-WHQGLN 143
Query: 598 SNHSDDS---PYSWSLPPYH 648
+ D PY++ Y+
Sbjct: 144 CDSRSDQCHHPYNYGFDYYY 163
>ref|NP_004033.2| arylsulfatase F precursor [Homo sapiens].
Length = 590
Score = 68.9 bits (167), Expect = 7e-12
Identities = 46/140 (32%), Positives = 74/140 (52%), Gaps = 12/140 (8%)
Frame = +1
Query: 265 VATDALNVLLIIVDDLR-PSLGCYGDKLVRSPNIDQLASHSLLFQNAFAQQAVCAPSRVS 441
V D N++LI+VDDL LGCYG+ +R+P+ID+LA + + ++C+PSR +
Sbjct: 25 VHDDKPNIVLIMVDDLGIGDLGCYGNDTMRTPHIDRLAREGVRLTQHISAASLCSPSRSA 84
Query: 442 FLTGRRPDTTRLYDFNS-----YWRAHAG---NFSTIPQYFKQNGYVTVSVGKVFHPGIS 597
FLTGR P + + + AG N +T+ K+ GY T +GK +H G++
Sbjct: 85 FLTGRYPIRSGMVSSGNRRVIQNLAVPAGLPLNETTLAALLKKQGYSTGLIGK-WHQGLN 143
Query: 598 SNHSDDS---PYSWSLPPYH 648
+ D PY++ Y+
Sbjct: 144 CDSRSDQCHHPYNYGFDYYY 163
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 40,052,715
Number of extensions: 1143970
Number of successful extensions: 5545
Number of sequences better than 1.0e-05: 20
Number of HSP's gapped: 5506
Number of HSP's successfully gapped: 20
Length of query: 341
Length of database: 18,297,164
Length adjustment: 103
Effective length of query: 238
Effective length of database: 14,901,872
Effective search space: 3546645536
Effective search space used: 3546645536
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-003773
(1024 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_034628.2| iduronate 2-sulfatase isoform a [Mus musculus]. 465 e-131
Alignment gi|NP_082986.3| arylsulfatase G isoform 1 precursor [Mus muscul... 69 8e-12
Alignment gi|NP_033319.1| steryl-sulfatase precursor [Mus musculus]. 67 3e-11
Alignment gi|NP_061292.2| N-sulfoglucosamine sulfohydrolase [Mus musculus]. 63 3e-10
Alignment gi|NP_033843.2| arylsulfatase A precursor [Mus musculus]. 62 7e-10
Alignment gi|NP_001180574.1| N-acetylgalactosamine-6-sulfatase isoform 2 ... 61 1e-09
Alignment gi|NP_057931.3| N-acetylgalactosamine-6-sulfatase isoform 1 pre... 61 1e-09
Alignment gi|NP_033842.3| arylsulfatase B precursor [Mus musculus]. 55 9e-08
Alignment gi|NP_775627.1| arylsulfatase J precursor [Mus musculus]. 53 3e-07
>ref|NP_034628.2| iduronate 2-sulfatase isoform a [Mus musculus].
Length = 552
Score = 465 bits (1197), Expect = e-131
Identities = 216/237 (91%), Positives = 228/237 (96%)
Frame = +1
Query: 268 ATDALNVLLIIVDDLRPSLGCYGDKLVRSPNIDQLASHSLLFQNAFAQQAVCAPSRVSFL 447
ATDALN+LLIIVDDLRPSLGCYGDKLVRSPNIDQLASHS+LFQNAFAQQAVCAPSRVSFL
Sbjct: 35 ATDALNILLIIVDDLRPSLGCYGDKLVRSPNIDQLASHSVLFQNAFAQQAVCAPSRVSFL 94
Query: 448 TGRRPDTTRLYDFNSYWRAHAGNFSTIPQYFKQNGYVTVSVGKVFHPGISSNHSDDSPYS 627
TGRRPDTTRLYDFNSYWR H+GNFSTIPQYFK+NGYVT+SVGKVFHPGISSNHSDD PYS
Sbjct: 95 TGRRPDTTRLYDFNSYWRVHSGNFSTIPQYFKENGYVTMSVGKVFHPGISSNHSDDYPYS 154
Query: 628 WSLPPYHPSSEKYENTKTCKGPDGELHANLLCPVDVAEVPEGTLPDKQSTERAIQLLEKL 807
WS PPYHPSSEKYENTKTCKG DG+LHANLLCPVDVA+VPEGTLPDKQSTE AI+LLEK+
Sbjct: 155 WSFPPYHPSSEKYENTKTCKGQDGKLHANLLCPVDVADVPEGTLPDKQSTEEAIRLLEKM 214
Query: 808 RTSAVPFFLAVGYHKPHIPFRYPQEFQKLYPLENVTLAPDPQVPAGLPPVAYNPWMD 978
+TSA PFFLAVGYHKPHIPFRYP+EFQKLYPLEN+TLAPDP VP LPPVAYNPWMD
Sbjct: 215 KTSASPFFLAVGYHKPHIPFRYPKEFQKLYPLENITLAPDPHVPDSLPPVAYNPWMD 271
>ref|NP_082986.3| arylsulfatase G isoform 1 precursor [Mus musculus].
Length = 525
Score = 68.6 bits (166), Expect = 8e-12
Identities = 59/218 (27%), Positives = 95/218 (43%), Gaps = 24/218 (11%)
Frame = +1
Query: 283 NVLLIIVDDLR-PSLGCYGDKLVRSPNIDQLASHSLLFQNAFAQQAVCAPSRVSFLTGR- 456
N+++I+ DD+ LG + + N+D++AS + F + A + C+PSR S LTGR
Sbjct: 37 NIVIILADDMGWGDLGANWAETKDTTNLDKMASEGMRFVDFHAAASTCSPSRASLLTGRL 96
Query: 457 --RPDTTRLYDFNSYWRAHAGNFSTIPQYFKQNGYVTVSVGK-------VFHPGISS-NH 606
R T + S N +T+ + +Q GYVT +GK +HP ++
Sbjct: 97 GLRNGVTHNFAVTSVGGLPV-NETTLAEVLRQEGYVTAMIGKWHLGHHGSYHPNFRGFDY 155
Query: 607 SDDSPYSWSLPPYHPSSEKYENTKTCKGPDG-------ELHANLLCP----VDVAEVPEG 753
PYS + Y C DG + + ++ P +++ E P
Sbjct: 156 YFGIPYSNDMGCTDAPGYNYPPCPACPQRDGLWRNPGRDCYTDVALPLYENLNIVEQPVN 215
Query: 754 TLPDKQS-TERAIQLLEKLRTSAVPFFLAVGYHKPHIP 864
Q ERA++ +E+ TS PF L VG H+P
Sbjct: 216 LSGLAQKYAERAVEFIEQASTSGRPFLLYVGLAHMHVP 253
>ref|NP_033319.1| steryl-sulfatase precursor [Mus musculus].
Length = 624
Score = 66.6 bits (161), Expect = 3e-11
Identities = 42/120 (35%), Positives = 62/120 (51%), Gaps = 9/120 (7%)
Frame = +1
Query: 283 NVLLIIVDDLR-PSLGCYGDKLVRSPNIDQLASHSLLFQNAFAQQAVCAPSRVSFLTGRR 459
N LLI+ DDL LGCYG+K +R+P++D+LA + A +C PSR +FLTGR
Sbjct: 36 NFLLIMADDLGIGDLGCYGNKTLRTPHLDRLAREGVKLTQHLAAAPLCTPSRAAFLTGRY 95
Query: 460 PDTTRL--------YDFNSYWRAHAGNFSTIPQYFKQNGYVTVSVGKVFHPGISSNHSDD 615
P + + Y F + + T+ + K GY T +GK +H G+S + D
Sbjct: 96 PPRSGMAAHGRVGVYLFTASSGGLPPSEVTMARLLKGRGYATALIGK-WHLGLSCRGATD 154
>ref|NP_061292.2| N-sulfoglucosamine sulfohydrolase [Mus musculus].
Length = 502
Score = 63.2 bits (152), Expect = 3e-10
Identities = 55/199 (27%), Positives = 82/199 (41%), Gaps = 7/199 (3%)
Frame = +1
Query: 283 NVLLIIVDDLRPSLGCYGDKLVRSPNIDQLASHSLLFQNAFAQQAVCAPSRVSFLTGRRP 462
NVLLI+ DD G Y + + +P++D L+ HSL+F+NAF + C+PSR S LTG
Sbjct: 24 NVLLIVADDGGFESGVYNNTAIATPHLDALSRHSLIFRNAFTSVSSCSPSRASLLTGLPQ 83
Query: 463 DTTRLY-------DFNSYWRAHAGNFSTIPQYFKQNGYVTVSVGKVFHPGISSNHSDDSP 621
+Y FNS+ ++P Q G T +GK H G + + D
Sbjct: 84 HQNGMYGLHQDVHHFNSF-----DKVQSLPLLLNQAGVRTGIIGKK-HVGPETVYPFDFA 137
Query: 622 YSWSLPPYHPSSEKYENTKTCKGPDGELHANLLCPVDVAEVPEGTLPDKQSTERAIQLLE 801
++ EN+ V +V KQ ++ +Q +
Sbjct: 138 FT------------EENS------------------SVMQVGRNITRIKQLVQKFLQTQD 167
Query: 802 KLRTSAVPFFLAVGYHKPH 858
PFFL V +H PH
Sbjct: 168 DR-----PFFLYVAFHDPH 181
>ref|NP_033843.2| arylsulfatase A precursor [Mus musculus].
Length = 506
Score = 62.0 bits (149), Expect = 7e-10
Identities = 64/222 (28%), Positives = 91/222 (40%), Gaps = 19/222 (8%)
Frame = +1
Query: 283 NVLLIIVDDLR-PSLGCYGDKLVRSPNIDQLASHSLLFQNAFAQQAVCAPSRVSFLTGRR 459
N+LLI DDL LG YG +PN+DQLA L F + + ++C PSR + LTGR
Sbjct: 21 NILLIFADDLGYGDLGSYGHPSSTTPNLDQLAEGGLRFTDFYVPVSLCTPSRAALLTGRL 80
Query: 460 PDTTRLYDFNSYWRAHAG---NFSTIPQYFKQNGYVTVSVGKVFHPGISSNHSDDSPYS- 627
P + +Y + G T+ + GY+T GK +H G+ + P+
Sbjct: 81 PVRSGMYPGVLGPSSQGGLPLEEVTLAEVLAARGYLTGMAGK-WHLGVGPEGAFLPPHQG 139
Query: 628 ---WSLPPYHPSSEKYENTKTCKGPD---------GELHANLLCPVDVAEVPEGTLP--D 765
+ PY +N TC PD G + LL + V P LP +
Sbjct: 140 FHRFLGIPYSHDQGPCQNL-TCFPPDIPCKGGCDQGLVPIPLLANLTVEAQPP-WLPGLE 197
Query: 766 KQSTERAIQLLEKLRTSAVPFFLAVGYHKPHIPFRYPQEFQK 891
+ + L+ + PFFL H H P Q F K
Sbjct: 198 ARYVSFSRDLMADAQRQGRPFFLYYASHHTHYPQFSGQSFTK 239
>ref|NP_001180574.1| N-acetylgalactosamine-6-sulfatase isoform 2 precursor [Mus
musculus].
Length = 440
Score = 61.2 bits (147), Expect = 1e-09
Identities = 58/230 (25%), Positives = 93/230 (40%), Gaps = 29/230 (12%)
Frame = +1
Query: 283 NVLLIIVDDLR-PSLGCYGDKLVRSPNIDQLASHSLLFQNAFAQQAVCAPSRVSFLTGRR 459
N++L+++DD+ LG G+ +PN+D++A+ +LF + ++ +C+PSR + LTGR
Sbjct: 29 NIVLLLMDDMGWGDLGVNGEPSRETPNLDRMAAEGMLFPSFYSANPLCSPSRAALLTGRL 88
Query: 460 PDTTRLYDFNSYWRAHAGNFST--------------IPQYFKQNGYVTVSVGK------- 576
P Y N AHA N T +P+ K+ GY VGK
Sbjct: 89 PIRNGFYTTN----AHARNAYTPQEIMGGIPNSEHLLPELLKKAGYTNKIVGKWHLGHRP 144
Query: 577 VFHP-------GISSNHSDDSPYSWSLPPYHPSSEKYENTKTCKGPDGELHANLLCPVDV 735
FHP S + PY P P +E G + P++
Sbjct: 145 QFHPLKHGFDEWFGSPNCHFGPYDNKAKPNIPVYRDWEMV-------GRFYEEF--PIN- 194
Query: 736 AEVPEGTLPDKQSTERAIQLLEKLRTSAVPFFLAVGYHKPHIPFRYPQEF 885
+ E L + T+ A+ ++ PFFL H P ++F
Sbjct: 195 RKTGEANL-TQLYTQEALDFIQTQHARQSPFFLYWAIDATHAPVYASRQF 243
>ref|NP_057931.3| N-acetylgalactosamine-6-sulfatase isoform 1 precursor [Mus
musculus].
Length = 520
Score = 61.2 bits (147), Expect = 1e-09
Identities = 58/230 (25%), Positives = 93/230 (40%), Gaps = 29/230 (12%)
Frame = +1
Query: 283 NVLLIIVDDLR-PSLGCYGDKLVRSPNIDQLASHSLLFQNAFAQQAVCAPSRVSFLTGRR 459
N++L+++DD+ LG G+ +PN+D++A+ +LF + ++ +C+PSR + LTGR
Sbjct: 29 NIVLLLMDDMGWGDLGVNGEPSRETPNLDRMAAEGMLFPSFYSANPLCSPSRAALLTGRL 88
Query: 460 PDTTRLYDFNSYWRAHAGNFST--------------IPQYFKQNGYVTVSVGK------- 576
P Y N AHA N T +P+ K+ GY VGK
Sbjct: 89 PIRNGFYTTN----AHARNAYTPQEIMGGIPNSEHLLPELLKKAGYTNKIVGKWHLGHRP 144
Query: 577 VFHP-------GISSNHSDDSPYSWSLPPYHPSSEKYENTKTCKGPDGELHANLLCPVDV 735
FHP S + PY P P +E G + P++
Sbjct: 145 QFHPLKHGFDEWFGSPNCHFGPYDNKAKPNIPVYRDWEMV-------GRFYEEF--PIN- 194
Query: 736 AEVPEGTLPDKQSTERAIQLLEKLRTSAVPFFLAVGYHKPHIPFRYPQEF 885
+ E L + T+ A+ ++ PFFL H P ++F
Sbjct: 195 RKTGEANL-TQLYTQEALDFIQTQHARQSPFFLYWAIDATHAPVYASRQF 243
>ref|NP_033842.3| arylsulfatase B precursor [Mus musculus].
Length = 534
Score = 55.1 bits (131), Expect = 9e-08
Identities = 59/228 (25%), Positives = 100/228 (43%), Gaps = 18/228 (7%)
Frame = +1
Query: 268 ATDALNVLLIIVDDLR-PSLGCYGDKLVRSPNIDQLASHSLLFQNAFAQQAVCAPSRVSF 444
AT +V+ ++ DDL LG +G ++R+P++D LA+ ++ N + Q +C PSR
Sbjct: 42 ATQPPHVVFVLADDLGWNDLGFHGS-VIRTPHLDALAAGGVVLDNYYVQP-LCTPSRSQL 99
Query: 445 LTGRRPDTTRLYDF---NSYWRAHAGNFSTIPQYFKQNGYVTVSVGKVFHPG------IS 597
LTGR L + + +PQ K+ GY T VGK +H G +
Sbjct: 100 LTGRYQIHLGLQHYLIMTCQPSCVPLDEKLLPQLLKEAGYATHMVGK-WHLGMYRKECLP 158
Query: 598 SNHSDDSPYSWSLPPYHPSSEKYENTKTCKGPDGELHANLLCPVDVAEVPEGTLPDKQST 777
+ D+ + + L SE Y + C P L+ C +D+ + G P K+
Sbjct: 159 TRRGFDTYFGYLL-----GSEDYYTHEAC-APIESLNGTR-CALDLRD---GEEPAKEYN 208
Query: 778 E-RAIQLLEKLRTSAV-------PFFLAVGYHKPHIPFRYPQEFQKLY 897
+ + K T+ + P FL + + H P + P+E+ + Y
Sbjct: 209 NIYSTNIFTKRATTVIANHPPEKPLFLYLAFQSVHDPLQVPEEYMEPY 256
>ref|NP_775627.1| arylsulfatase J precursor [Mus musculus].
Length = 598
Score = 53.1 bits (126), Expect = 3e-07
Identities = 60/225 (26%), Positives = 93/225 (41%), Gaps = 16/225 (7%)
Frame = +1
Query: 271 TDALNVLLIIVDDLR-PSLGCYGDKLVRSPNIDQLASHSLLFQNAFAQQAVCAPSRVSFL 447
T +++ I+ DD +G +G + +++P +D+LA+ + +N + Q +C PSR F+
Sbjct: 71 TSQPHLIFILADDQGFRDVGYHGSE-IKTPTLDKLAAEGVKLENYYVQP-ICTPSRSQFI 128
Query: 448 TGRRPDTTRLYDFNSYWRAHAGNF-----STIPQYFKQNGYVTVSVGKVFHPGISSNHSD 612
TG+ T L +S R N +T+PQ K+ GY T VGK +H G D
Sbjct: 129 TGKYQIHTGLQ--HSIIRPTQPNCLPLDNATLPQKLKEVGYSTHMVGK-WHLGF--YRKD 183
Query: 613 DSPYSWSLPPYHPS---SEKYENTKTCKGPDGELHANLLCPVDVAE-------VPEGTLP 762
P + S S Y C P +C D+ E G
Sbjct: 184 CMPTKRGFDTFFGSLLGSGDYYTHYKCDSPG-------VCGYDLYENDNAAWDYDNGIYS 236
Query: 763 DKQSTERAIQLLEKLRTSAVPFFLAVGYHKPHIPFRYPQEFQKLY 897
+ T+R Q+L P FL V Y H P + P + + Y
Sbjct: 237 TQMYTQRVQQIL-ATHDPTKPLFLYVAYQAVHSPLQAPGRYFEHY 280
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 33,746,332
Number of extensions: 948820
Number of successful extensions: 4561
Number of sequences better than 1.0e-05: 9
Number of HSP's gapped: 4543
Number of HSP's successfully gapped: 9
Length of query: 341
Length of database: 15,617,559
Length adjustment: 102
Effective length of query: 239
Effective length of database: 12,553,887
Effective search space: 3000378993
Effective search space used: 3000378993
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-003773
(1024 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_003135490.2| PREDICTED: iduronate 2-sulfatase [Sus scrofa]. 214 5e-56
Alignment gi|XP_003360271.1| PREDICTED: steryl-sulfatase [Sus scrofa]. 68 7e-12
Alignment gi|NP_999120.1| N-acetylgalactosamine-6-sulfatase precursor [Su... 66 4e-11
Alignment gi|XP_003131311.1| PREDICTED: arylsulfatase G-like [Sus scrofa]. 64 2e-10
Alignment gi|NP_999098.1| arylsulfatase A [Sus scrofa]. 62 4e-10
Alignment gi|XP_003361977.1| PREDICTED: arylsulfatase D, partial [Sus scr... 57 1e-08
Alignment gi|XP_003123815.2| PREDICTED: arylsulfatase K-like [Sus scrofa]. 54 1e-07
Alignment gi|XP_003129285.1| PREDICTED: arylsulfatase J [Sus scrofa]. 51 9e-07
>ref|XP_003135490.2| PREDICTED: iduronate 2-sulfatase [Sus scrofa].
Length = 426
Score = 214 bits (546), Expect = 5e-56
Identities = 100/100 (100%), Positives = 100/100 (100%)
Frame = +1
Query: 679 TCKGPDGELHANLLCPVDVAEVPEGTLPDKQSTERAIQLLEKLRTSAVPFFLAVGYHKPH 858
TCKGPDGELHANLLCPVDVAEVPEGTLPDKQSTERAIQLLEKLRTSAVPFFLAVGYHKPH
Sbjct: 41 TCKGPDGELHANLLCPVDVAEVPEGTLPDKQSTERAIQLLEKLRTSAVPFFLAVGYHKPH 100
Query: 859 IPFRYPQEFQKLYPLENVTLAPDPQVPAGLPPVAYNPWMD 978
IPFRYPQEFQKLYPLENVTLAPDPQVPAGLPPVAYNPWMD
Sbjct: 101 IPFRYPQEFQKLYPLENVTLAPDPQVPAGLPPVAYNPWMD 140
>ref|XP_003360271.1| PREDICTED: steryl-sulfatase [Sus scrofa].
Length = 578
Score = 68.2 bits (165), Expect = 7e-12
Identities = 49/153 (32%), Positives = 73/153 (47%), Gaps = 12/153 (7%)
Frame = +1
Query: 283 NVLLIIVDDLR-PSLGCYGDKLVRSPNIDQLASHSLLFQNAFAQQAVCAPSRVSFLTGRR 459
N +L++ DDL GCYG+K +R+PNID+LA + A +C PSR +FLTGR
Sbjct: 23 NFVLLMADDLGIGDPGCYGNKTLRTPNIDRLAGGGVKLTQHLAAAPLCTPSRAAFLTGRY 82
Query: 460 PDTTRLYDFNS----YWRAHAGNFS----TIPQYFKQNGYVTVSVGKVFHPGISSNHSDD 615
P + + N + A +G T + K GY T +GK +H G + ++S D
Sbjct: 83 PIRSGMAAQNQVGVFIFSASSGGLPPSEITFAKLLKSQGYTTALIGK-WHLGTNCHNSSD 141
Query: 616 ---SPYSWSLPPYHPSSEKYENTKTCKGPDGEL 705
P S +H N + CK +G +
Sbjct: 142 FCHHPLSHGFDYFH--GIPVTNLRDCKPGEGSV 172
>ref|NP_999120.1| N-acetylgalactosamine-6-sulfatase precursor [Sus scrofa].
Length = 522
Score = 65.9 bits (159), Expect = 4e-11
Identities = 42/124 (33%), Positives = 62/124 (50%), Gaps = 22/124 (17%)
Frame = +1
Query: 283 NVLLIIVDDLR-PSLGCYGDKLVRSPNIDQLASHSLLFQNAFAQQAVCAPSRVSFLTGRR 459
N+LL+++DD+ LG YG+ +PN+D++A+ +LF + +A +C+PSR + LTGR
Sbjct: 31 NILLLLMDDMGWGDLGVYGEPSRETPNLDRMAAEGMLFPSFYAANPLCSPSRAALLTGRL 90
Query: 460 PDTTRLYDFNSYWRAHAGNFST--------------IPQYFKQNGYVTVSVGK------- 576
P T Y N HA N T +P+ K GY + VGK
Sbjct: 91 PIRTGFYTTN----GHARNAYTPQEIVGGIPDPEHLLPELLKGAGYASKIVGKWHLGHRP 146
Query: 577 VFHP 588
FHP
Sbjct: 147 QFHP 150
>ref|XP_003131311.1| PREDICTED: arylsulfatase G-like [Sus scrofa].
Length = 525
Score = 63.5 bits (153), Expect = 2e-10
Identities = 58/227 (25%), Positives = 104/227 (45%), Gaps = 28/227 (12%)
Frame = +1
Query: 283 NVLLIIVDDLR-PSLGCYGDKLVRSPNIDQLASHSLLFQNAFAQQAVCAPSRVSFLTGR- 456
N ++I+ DD+ LG + + N+D+LA+ + F + A + C+PSR S LTGR
Sbjct: 37 NFVIILADDMGWGDLGANWAETKDTANLDKLAAEGMRFVDFHAAASTCSPSRASLLTGRL 96
Query: 457 --RPDTTRLYDFNSYWRAHAGNFSTIPQYFKQNGYVTVSVGK-------VFHP------- 588
R T + S N +T+ + ++ GY+T +GK FHP
Sbjct: 97 GLRNGVTHNFAVTSVGGLPL-NETTLAEVLQRAGYITGMIGKWHLGHHGSFHPNFRGFDY 155
Query: 589 --GISSNHS---DDSPYSWSLPPYHPSSEKYENTKTCKGPDGELHANLLCP----VDVAE 741
GI +H D+P ++ PP +++ ++ + + ++++ P +++ E
Sbjct: 156 YFGIPYSHDMGCTDTP-GYNYPPCPACPRRHQPSRNL---ERDCYSDVALPLYENLNIVE 211
Query: 742 VPEGTLP-DKQSTERAIQLLEKLRTSAVPFFLAVGYHKPHIPFRYPQ 879
P ++ E+A Q +++ R S PF L VG H+P PQ
Sbjct: 212 QPVNLSGLARKYAEKATQFIQQARASGRPFLLYVGLAHMHVPLSRPQ 258
>ref|NP_999098.1| arylsulfatase A [Sus scrofa].
Length = 507
Score = 62.4 bits (150), Expect = 4e-10
Identities = 66/225 (29%), Positives = 92/225 (40%), Gaps = 19/225 (8%)
Frame = +1
Query: 268 ATDALNVLLIIVDDLR-PSLGCYGDKLVRSPNIDQLASHSLLFQNAFAQQAVCAPSRVSF 444
AT N++LI DDL LG YG +PN+DQLA+ L F + + ++C PSR +
Sbjct: 17 ATSPPNIVLIFADDLGYGDLGSYGHPSSTTPNLDQLAAGGLRFTDFYVPVSLCTPSRAAL 76
Query: 445 LTGRRPDTTRLYDFNSYWRAHAG---NFSTIPQYFKQNGYVTVSVGKVFHPGISSNHSDD 615
LTGR P LY + G T+ + GY+T GK +H G+ +
Sbjct: 77 LTGRLPVRMGLYPGVLEPSSRGGLPLEEVTLAEVLAARGYLTGMAGK-WHLGVGPEGAFL 135
Query: 616 SPYS----WSLPPYHPSSEKYENTKTCKGP----DGELHANLLCPVDV-----AEVPEGT 756
P+ + PY +N TC P DG L+ PV + E
Sbjct: 136 PPHQGFHRFLGIPYSHDQGPCQNL-TCFPPSTPCDGSCDQGLV-PVPLLANLSVEAQPPW 193
Query: 757 LPDKQSTERAI--QLLEKLRTSAVPFFLAVGYHKPHIPFRYPQEF 885
LP ++ A L+ + PFFL H H P Q F
Sbjct: 194 LPGLEARYVAFARDLMADAQRQGRPFFLYYASHHTHYPQFSGQSF 238
>ref|XP_003361977.1| PREDICTED: arylsulfatase D, partial [Sus scrofa].
Length = 540
Score = 57.4 bits (137), Expect = 1e-08
Identities = 38/120 (31%), Positives = 55/120 (45%), Gaps = 9/120 (7%)
Frame = +1
Query: 283 NVLLIIVDDLR-PSLGCYGDKLVRSPNIDQLASHSLLFQNAFAQQAVCAPSRVSFLTGRR 459
N+LLI+ DDL LGCYG+ +R P + A VC PSR +FLTGR
Sbjct: 34 NILLIMADDLGIGDLGCYGNDTLRYPGLGLRVGAGTRLSAHLAAAPVCTPSRAAFLTGRH 93
Query: 460 PDTTRLYDFNSY----WRAHAG----NFSTIPQYFKQNGYVTVSVGKVFHPGISSNHSDD 615
+ + Y W +G N +T + ++ GY T +GK +H G++ D
Sbjct: 94 ALRSGXXXXHGYRVLRWNGGSGGLPQNETTFARILQRQGYATGLIGK-WHQGVNCESRTD 152
>ref|XP_003123815.2| PREDICTED: arylsulfatase K-like [Sus scrofa].
Length = 280
Score = 54.3 bits (129), Expect = 1e-07
Identities = 52/204 (25%), Positives = 93/204 (45%), Gaps = 3/204 (1%)
Frame = +1
Query: 274 DALNVLLIIVDDLRPSLGCYGD-KLVRSPNIDQLASHSLLFQNAFAQQAVCAPSRVSFLT 450
DA NV+L++ D L Y + ++V+ P I+ + +H F NA+ +C PSR + +
Sbjct: 34 DAPNVVLVVSDSFDGRLTFYPESQVVKLPFINFMKAHGTSFLNAYTNSPICCPSRAAMWS 93
Query: 451 GRRPDTTRLYDFNSYWRAHAGNFSTIPQYFKQNGYVTVSVGKVFHPGISSNHS-DDSPYS 627
G T L + + ++ N++T +++GY T GK+ + S +HS + +
Sbjct: 94 GL---FTHLTESWNNFKGLDPNYTTWMDVMEKHGYRTQKFGKLDY--TSGHHSISNRVEA 148
Query: 628 WSLPPYHPSSEKYENTKTCKGPDGELHANLLCPVDVAEVPEGTLPDKQSTERAIQLLEK- 804
W+ + +G NL+ V EG D ++T++A++ L K
Sbjct: 149 WT-----------RDVAFLLRQEGRPMVNLISKKTKVRVMEG---DWKNTDKAVKWLRKE 194
Query: 805 LRTSAVPFFLAVGYHKPHIPFRYP 876
PF L +G + PH P+ P
Sbjct: 195 AMNYTQPFVLYLGLNLPH-PYPSP 217
>ref|XP_003129285.1| PREDICTED: arylsulfatase J [Sus scrofa].
Length = 602
Score = 51.2 bits (121), Expect = 9e-07
Identities = 58/226 (25%), Positives = 94/226 (41%), Gaps = 16/226 (7%)
Frame = +1
Query: 268 ATDALNVLLIIVDDLR-PSLGCYGDKLVRSPNIDQLASHSLLFQNAFAQQAVCAPSRVSF 444
A+ +++ I+ DD +G +G + +++P +D+LA+ + +N + Q +C PSR F
Sbjct: 76 ASSQPHLIFILADDQGFRDVGYHGSE-IKTPTLDKLAAEGVKLENYYVQP-ICTPSRSQF 133
Query: 445 LTGRRPDTTRLYDFNSYWRAHAGNF-----STIPQYFKQNGYVTVSVGKVFHPGISSNHS 609
+TG+ T L +S R N +T+PQ K+ GY T VGK +H G
Sbjct: 134 ITGKYQIHTGLQ--HSIIRPTQPNCLPLDNATLPQKLKEVGYSTHMVGK-WHLGF--YRK 188
Query: 610 DDSPYSWSLPPYHPS---SEKYENTKTCKGPDGELHANLLCPVDVAE-------VPEGTL 759
+ P + S S Y C P +C D+ E G
Sbjct: 189 ECMPTKRGFDTFFGSLLGSGDYYTHYKCDSPG-------MCGYDLYENENAAWDYDNGIY 241
Query: 760 PDKQSTERAIQLLEKLRTSAVPFFLAVGYHKPHIPFRYPQEFQKLY 897
+ T+R Q+L P FL + Y H P + P + + Y
Sbjct: 242 STQMYTQRVQQILAS-HDPKRPIFLYIAYQAVHSPLQAPGRYFEHY 286
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 25,588,677
Number of extensions: 774163
Number of successful extensions: 3909
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 3898
Number of HSP's successfully gapped: 8
Length of query: 341
Length of database: 11,343,932
Length adjustment: 100
Effective length of query: 241
Effective length of database: 8,854,232
Effective search space: 2133869912
Effective search space used: 2133869912
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-003773
(1024 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_ChrX 406 e-111
>Sscrofa_ChrX
|| Length = 144288218
Score = 406 bits (205), Expect = e-111
Identities = 205/205 (100%)
Strand = Plus / Plus
Query: 676 aagacctgcaagggaccagatggagaactccatgccaacctgctgtgtcctgtggatgtg 735
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139050896 aagacctgcaagggaccagatggagaactccatgccaacctgctgtgtcctgtggatgtg 139050955
Query: 736 gcggaggtgcccgagggcaccttgcctgacaagcagagcaccgagcgagccatacagttg 795
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139050956 gcggaggtgcccgagggcaccttgcctgacaagcagagcaccgagcgagccatacagttg 139051015
Query: 796 ttggaaaagctgaggacgtcggccgttcctttcttcctggctgtgggctatcacaagcct 855
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139051016 ttggaaaagctgaggacgtcggccgttcctttcttcctggctgtgggctatcacaagcct 139051075
Query: 856 cacatccccttcagatacccccagg 880
|||||||||||||||||||||||||
Sbjct: 139051076 cacatccccttcagatacccccagg 139051100
Score = 385 bits (194), Expect = e-104
Identities = 247/273 (90%)
Strand = Plus / Minus
Query: 2 ggatttcgcgcacgcgcactcgcgcccgggccagcgcccgggcctgtgcgccgggcggct 61
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139066433 ggatttcgcgcaggcgcactcgcgcccgggccagcgcccgggcctgtgcgccgggcggct 139066374
Query: 62 gcggctgccttgcgcggtccgctggggctgcccacccgaggctnnnnnnnnnnnnnnnnn 121
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139066373 gcggctgccttgcgcggtccgctggggctgcccacccgaggctggcggcgggggcggccc 139066314
Query: 122 nnnnnnnntgcccaagcttgtcatcgttgtcccggagcggccgcgctggggcaagaatgc 181
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139066313 ggcccgcctgcccaagcttgtcatcgttgtcccggagcggccgcgctggggcaagaatgc 139066254
Query: 182 tgccgcccggccggggcttgctctggcttggcctggtcctgggctctgcctgcgcctccc 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139066253 tgccgcccggccggggcttgctctggcttggcctggtcctgggctctgcctgcgcctccc 139066194
Query: 242 tcggatccgcggcgccgggcagcgtcgccacag 274
|||||||||||||||||||||||||||||||||
Sbjct: 139066193 tcggatccgcggcgccgggcagcgtcgccacag 139066161
Score = 230 bits (116), Expect = 1e-57
Identities = 150/156 (96%), Gaps = 4/156 (2%)
Strand = Plus / Plus
Query: 873 cccccaggagtttcagaagttgtatcccttggagaacgtgaccctggctcctgaccccca 932
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139052470 ccccaaggagtttcagaagttgtatcccttggagaacgtgaccctggctcctgaccccca 139052529
Query: 933 ggtccctgccggcctccctcccgtggcctacaacccctggatggac-tcaagcagcggga 991
|||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||
Sbjct: 139052530 ggtccctgccggcctccctcccgtggcctacaacccctggatggacatcaggcagcggga 139052589
Query: 992 ggacgt-caagccctaaa-ctca-tgtgccctatgg 1024
|||||| ||||||||||| |||| ||||||||||||
Sbjct: 139052590 ggacgtccaagccctaaacctcagtgtgccctatgg 139052625
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 23,406,421
Number of extensions: 120
Number of successful extensions: 120
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 120
Number of HSP's successfully gapped: 4
Length of query: 1024
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1003
Effective length of database: 2,808,413,156
Effective search space: 2816838395468
Effective search space used: 2816838395468
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 29 (58.0 bits)