Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-003789
(1811 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001001134.1| solute carrier organic anion transporter fam... 816 0.0
Alignment gi|XP_002702640.1| PREDICTED: SLCO3A1 protein-like [Bos taurus]. 723 0.0
Alignment gi|XP_002687790.1| PREDICTED: solute carrier organic anion tran... 187 3e-47
Alignment gi|XP_869052.2| PREDICTED: solute carrier organic anion transpo... 187 3e-47
Alignment gi|NP_777254.1| solute carrier organic anion transporter family... 176 8e-44
Alignment gi|NP_001178438.1| solute carrier organic anion transporter fam... 174 2e-43
Alignment gi|XP_002687789.1| PREDICTED: solute carrier organic anion tran... 174 2e-43
Alignment gi|NP_991373.1| solute carrier organic anion transporter family... 165 1e-40
Alignment gi|NP_001179775.1| solute carrier organic anion transporter fam... 164 2e-40
Alignment gi|XP_002689453.1| PREDICTED: solute carrier organic anion tran... 164 2e-40
>ref|NP_001001134.1| solute carrier organic anion transporter family member 3A1 [Bos
taurus].
Length = 710
Score = 816 bits (2107), Expect = 0.0
Identities = 400/471 (84%), Positives = 405/471 (85%)
Frame = +2
Query: 2 YVDAVFIDTSNLDITPDDPRWIXXXXXXXXXXXXXXXXXXXXXXXXPQSLPPHSDPALES 181
YVDAVFIDTSNLDITPDDPRWI PQSLPPHSDPALES
Sbjct: 240 YVDAVFIDTSNLDITPDDPRWIGAWWGGFLLCGALLFFSSVLMFGFPQSLPPHSDPALES 299
Query: 182 EQAMLPEREYERPKPSNGVLRHPLEPDTSASCFQQLRVIPKVTKHLLSNPVFTCIILAAC 361
EQAMLPEREYERPKPSNGVLRHPLEPD+SASCFQQLRVIPKVTKHLLSNPVFTCIILAAC
Sbjct: 300 EQAMLPEREYERPKPSNGVLRHPLEPDSSASCFQQLRVIPKVTKHLLSNPVFTCIILAAC 359
Query: 362 MEIAVVAGFAAFLGKYLEQQFNLTTSSANQLLGMTAIPCACLGIFXXXXXXXXXXXXXXX 541
MEIAVVAGFAAFLGKYLEQQFNLTTSSANQLLGMTAIPCACLGIF
Sbjct: 360 MEIAVVAGFAAFLGKYLEQQFNLTTSSANQLLGMTAIPCACLGIFLGGLLVKKLSLSALG 419
Query: 542 XIRMAMLVNLVSTACYVSFLFLGCDTGPVAGVTVPYGNTSAPGSTLDPYSPCNKNCECQT 721
IRMAMLVNLVSTACYVSFLFLGCDTGPVAGVTVPYGN+S PGS LDPYS CNKNCECQT
Sbjct: 420 AIRMAMLVNLVSTACYVSFLFLGCDTGPVAGVTVPYGNSSTPGSALDPYSSCNKNCECQT 479
Query: 722 DSFTPVCGADGITYLSACFAGCNSTNLTGCACLTTVPPENATVVPGKCPSPGCQEAFLTF 901
DSFTPVCGADGITYLSACFAGCNSTNLTGCACL T+PPENATV+PGKCPSPGCQEAFLTF
Sbjct: 480 DSFTPVCGADGITYLSACFAGCNSTNLTGCACLMTIPPENATVIPGKCPSPGCQEAFLTF 539
Query: 902 LCVMCVCSMIGAMAQTPSVIILIRTVSPELKSYAXXXXXXXXXXXXXXXXXXXXXAGIDS 1081
LCVMCVCSMIGAMAQTPSVIILIRTVSPELKSYA AGIDS
Sbjct: 540 LCVMCVCSMIGAMAQTPSVIILIRTVSPELKSYALGVLFLLLRLLGFIPPPLIFGAGIDS 599
Query: 1082 TCLFWSTFCGEQGACVLYDNVAYRYLYVSIAIALKSFAFILYTTTWQCLRKNYKRYIKNH 1261
TCLFWSTFCGEQGAC LYDNVAYRYLYVSIAIALKSFAF+LYTTTWQCLRKNYKRYIKNH
Sbjct: 600 TCLFWSTFCGEQGACALYDNVAYRYLYVSIAIALKSFAFLLYTTTWQCLRKNYKRYIKNH 659
Query: 1262 EGGLSTSEFFASTLTLDNLGRDPVPANQTHRTKFIYNLEDHEWCENMESVL 1414
EGGLSTSEFFASTLTLDNLGRDPVPANQTHRTKFIYNLEDHEWCENMESVL
Sbjct: 660 EGGLSTSEFFASTLTLDNLGRDPVPANQTHRTKFIYNLEDHEWCENMESVL 710
>ref|XP_002702640.1| PREDICTED: SLCO3A1 protein-like [Bos taurus].
Length = 592
Score = 723 bits (1866), Expect = 0.0
Identities = 356/427 (83%), Positives = 361/427 (84%)
Frame = +2
Query: 2 YVDAVFIDTSNLDITPDDPRWIXXXXXXXXXXXXXXXXXXXXXXXXPQSLPPHSDPALES 181
YVDAVFIDTSNLDITPDDPRWI PQSLPPHSDPALES
Sbjct: 140 YVDAVFIDTSNLDITPDDPRWIGAWWGGFLLCGALLFFSSVLMFGFPQSLPPHSDPALES 199
Query: 182 EQAMLPEREYERPKPSNGVLRHPLEPDTSASCFQQLRVIPKVTKHLLSNPVFTCIILAAC 361
EQAMLPEREYERPKPSNGVLRHPLEPD+SASCFQQLRVIPKVTKHLLSNPVFTCIILAAC
Sbjct: 200 EQAMLPEREYERPKPSNGVLRHPLEPDSSASCFQQLRVIPKVTKHLLSNPVFTCIILAAC 259
Query: 362 MEIAVVAGFAAFLGKYLEQQFNLTTSSANQLLGMTAIPCACLGIFXXXXXXXXXXXXXXX 541
MEIAVVAGFAAFLGKYLEQQFNLTTSSANQLLGMTAIPCACLGIF
Sbjct: 260 MEIAVVAGFAAFLGKYLEQQFNLTTSSANQLLGMTAIPCACLGIFLGGLLVKKLSLSALG 319
Query: 542 XIRMAMLVNLVSTACYVSFLFLGCDTGPVAGVTVPYGNTSAPGSTLDPYSPCNKNCECQT 721
IRMAMLVNLVSTACYVSFLFLGCDTGPVAGVTVPYGN+S PGS LDPYS CNKNCECQT
Sbjct: 320 AIRMAMLVNLVSTACYVSFLFLGCDTGPVAGVTVPYGNSSTPGSALDPYSSCNKNCECQT 379
Query: 722 DSFTPVCGADGITYLSACFAGCNSTNLTGCACLTTVPPENATVVPGKCPSPGCQEAFLTF 901
DSFTPVCGADGITYLSACFAGCNSTNLTGCACL T+PPENATV+PGKCPSPGCQEAFLTF
Sbjct: 380 DSFTPVCGADGITYLSACFAGCNSTNLTGCACLMTIPPENATVIPGKCPSPGCQEAFLTF 439
Query: 902 LCVMCVCSMIGAMAQTPSVIILIRTVSPELKSYAXXXXXXXXXXXXXXXXXXXXXAGIDS 1081
LCVMCVCSMIGAMAQTPSVIILIRTVSPELKSYA AGIDS
Sbjct: 440 LCVMCVCSMIGAMAQTPSVIILIRTVSPELKSYALGVLFLLLRLLGFIPPPLIFGAGIDS 499
Query: 1082 TCLFWSTFCGEQGACVLYDNVAYRYLYVSIAIALKSFAFILYTTTWQCLRKNYKRYIKNH 1261
TCLFWSTFCGEQGAC LYDNVAYRYLYVSIAIALKSFAF+LYTTTWQCLRKNYKRYIKNH
Sbjct: 500 TCLFWSTFCGEQGACALYDNVAYRYLYVSIAIALKSFAFLLYTTTWQCLRKNYKRYIKNH 559
Query: 1262 EGGLSTS 1282
EGGLSTS
Sbjct: 560 EGGLSTS 566
>ref|XP_002687790.1| PREDICTED: solute carrier organic anion transporter family, member
1C1 isoform 2 [Bos taurus].
Length = 712
Score = 187 bits (474), Expect = 3e-47
Identities = 123/432 (28%), Positives = 195/432 (45%), Gaps = 19/432 (4%)
Frame = +2
Query: 2 YVDAVFIDTSNLDITPDDPRWIXXXXXXXXXXXXXXXXXXXXXXXXPQSLP-PHS--DPA 172
YVD F++ ++ ITP DP+W+ P++LP P S D +
Sbjct: 250 YVDIGFVNLEHITITPKDPQWVGAWWLGYLIAGSITLLAAVPFWCLPRTLPRPRSREDSS 309
Query: 173 LESEQA---MLPEREYERPKPSNGVLRHPLEPDTSASCFQQLRVIPKVTKHLLSNPVFTC 343
SE++ M +Y+ P P A + R K L NPV+
Sbjct: 310 SSSEKSKFIMDDHTDYQTP------------PGEKAKIMEMARDFLPSLKSLFGNPVYFL 357
Query: 344 IILAACMEIAVVAGFAAFLGKYLEQQFNLTTSSANQLLGMTAIPCACLGIFXXXXXXXXX 523
+ A+ ++ + G + KY+EQQ+ + S AN ++G+ IP LGIF
Sbjct: 358 YLCASTVQFNSLFGMVTYKPKYIEQQYGQSASKANFVIGLINIPAVALGIFSGGIVMKKF 417
Query: 524 XXXXXXXIRMAMLVNLVSTACYVSFLFLGCDTGPVAGVTVPYGNTSAPGSTLDP--YSPC 697
++ + +++ ++S LGC+ VAG+T+ Y T P S + +S C
Sbjct: 418 RISICGAAKLYLGSSVLGYLLFLSLFALGCENSDVAGLTISYQGTK-PVSYHERALFSDC 476
Query: 698 NKNCECQTDSFTPVCGADGITYLSACFAGCNSTNLTG-------CAC--LTTVPPENATV 850
N C+C + P+CG +GITY SAC AGC +T +G C C L N+T
Sbjct: 477 NSRCKCSETKWEPICGENGITYASACLAGCQTTTGSGKTTVFNNCTCVGLAASKSGNSTG 536
Query: 851 VPGKCPSP-GCQEAFLTFLCVMCVCSMIGAMAQTPSVIILIRTVSPELKSYAXXXXXXXX 1027
+ G+C GC + FL FL + + S ++ P I+L+R + P+LKS+A
Sbjct: 537 MVGRCQKDNGCAKMFLYFLVIAVITSYTLSVGGIPGYILLLRCIKPQLKSFALGIYTLAV 596
Query: 1028 XXXXXXXXXXXXXAGIDSTCLFWS-TFCGEQGACVLYDNVAYRYLYVSIAIALKSFAFIL 1204
ID++CL W CG +G+C LYD+ A+R++Y+ + + L + L
Sbjct: 597 RVLAGIPSPIYFGVLIDTSCLKWGFKRCGSKGSCRLYDSNAFRHIYLGLTMMLGIMSIFL 656
Query: 1205 YTTTWQCLRKNY 1240
T L+KNY
Sbjct: 657 STAVLFTLKKNY 668
>ref|XP_869052.2| PREDICTED: solute carrier organic anion transporter family, member
1C1 isoform 3 [Bos taurus].
Length = 712
Score = 187 bits (474), Expect = 3e-47
Identities = 123/432 (28%), Positives = 195/432 (45%), Gaps = 19/432 (4%)
Frame = +2
Query: 2 YVDAVFIDTSNLDITPDDPRWIXXXXXXXXXXXXXXXXXXXXXXXXPQSLP-PHS--DPA 172
YVD F++ ++ ITP DP+W+ P++LP P S D +
Sbjct: 250 YVDIGFVNLDHITITPKDPQWVGAWWLGYLIAGSITLLAAVPFWCLPRTLPRPRSREDSS 309
Query: 173 LESEQA---MLPEREYERPKPSNGVLRHPLEPDTSASCFQQLRVIPKVTKHLLSNPVFTC 343
SE++ M +Y+ P P A + R K L NPV+
Sbjct: 310 SSSEKSKFIMDDHTDYQTP------------PGEKAKIMEMARDFLPSLKSLFGNPVYFL 357
Query: 344 IILAACMEIAVVAGFAAFLGKYLEQQFNLTTSSANQLLGMTAIPCACLGIFXXXXXXXXX 523
+ A+ ++ + G + KY+EQQ+ + S AN ++G+ IP LGIF
Sbjct: 358 YLCASTVQFNSLFGMVTYKPKYIEQQYGQSASKANFVIGLINIPAVALGIFSGGIVMKKF 417
Query: 524 XXXXXXXIRMAMLVNLVSTACYVSFLFLGCDTGPVAGVTVPYGNTSAPGSTLDP--YSPC 697
++ + +++ ++S LGC+ VAG+T+ Y T P S + +S C
Sbjct: 418 RISIRGAAKLYLGSSVLGYLLFLSLFALGCENSDVAGLTISYQGTK-PVSYHERALFSDC 476
Query: 698 NKNCECQTDSFTPVCGADGITYLSACFAGCNSTNLTG-------CAC--LTTVPPENATV 850
N C+C + P+CG +GITY SAC AGC +T +G C C L N+T
Sbjct: 477 NSRCKCSETKWEPICGENGITYASACLAGCQTTTGSGKTTVFNNCTCVGLAASKSGNSTG 536
Query: 851 VPGKCPSP-GCQEAFLTFLCVMCVCSMIGAMAQTPSVIILIRTVSPELKSYAXXXXXXXX 1027
+ G+C GC + FL FL + + S ++ P I+L+R + P+LKS+A
Sbjct: 537 MVGRCQKDNGCAKMFLYFLVIAVITSYTLSVGGIPGYILLLRCIKPQLKSFALGIYTLAV 596
Query: 1028 XXXXXXXXXXXXXAGIDSTCLFWS-TFCGEQGACVLYDNVAYRYLYVSIAIALKSFAFIL 1204
ID++CL W CG +G+C LYD+ A+R++Y+ + + L + L
Sbjct: 597 RVLAGIPSPIYFGVLIDTSCLKWGFKRCGSKGSCRLYDSNAFRHIYLGLTMMLGIMSIFL 656
Query: 1205 YTTTWQCLRKNY 1240
T L+KNY
Sbjct: 657 STAVLFTLKKNY 668
>ref|NP_777254.1| solute carrier organic anion transporter family member 2A1 [Bos
taurus].
Length = 644
Score = 176 bits (445), Expect = 8e-44
Identities = 116/435 (26%), Positives = 188/435 (43%), Gaps = 11/435 (2%)
Frame = +2
Query: 2 YVDAVFIDTSNLDITPDDPRWIXXXXXXXXXXXXXXXXXXXXXXXXPQSLPPHSDPALES 181
+VD +DT++++++P DPRWI P+++P
Sbjct: 233 FVDYGRVDTASVNLSPGDPRWIGAWWLGLLISSACLVVTSFPFFFFPRAIPT-------- 284
Query: 182 EQAMLPEREYERPKPSNGVLRHPLEPDTSASCFQQLRVIPKVTKHLLSNPVFTCIILAAC 361
+ ER P R+ E + S ++ P++ LL NP+F ++LA C
Sbjct: 285 --------KMERTHPMVDEARNTEEVKSRRSLVDFIKRFPRIFLRLLMNPLFMLVVLAQC 336
Query: 362 MEIAVVAGFAAFLGKYLEQQFNLTTSSANQLLGMTAIPCACLGIFXXXXXXXXXXXXXXX 541
+V+AG + FL K+LE+Q+ + + AN L+G +P A LG+
Sbjct: 337 TFSSVIAGLSTFLNKFLEKQYGASAAYANFLIGAVNLPAAALGMLLGGILMKRCAFSLQT 396
Query: 542 XIRMAMLVNLVSTACYVSFLFLGCDTGPVAGVTVPYGNTSAPGSTLDPYSPCNKNCECQT 721
R+A + ++S F+GC T VA V P ++S L PC + C C
Sbjct: 397 IPRVAATIIIISMILCAPLFFMGCSTPLVAEVYPPSTSSSIRPQPL----PCRQGCSCPD 452
Query: 722 DSFTPVCGADGITYLSACFAGCNSTNLT----------GCACLTTVPPENATVVPGKCPS 871
F PVCG DGI YLS C AGC+ N + C+C V + + G CP
Sbjct: 453 SVFHPVCGDDGIEYLSPCHAGCSEVNFSSIALKQPIYLNCSC---VNRGSGSAKTGPCP- 508
Query: 872 PGCQEAFLTFLCVMCVCSMIGAMAQTPSVIILIRTVSPELKSYAXXXXXXXXXXXXXXXX 1051
C L + ++ ++I ++ P ++++R V+ + KS+A
Sbjct: 509 VSCAHFLLPTIFLISFAALIACISHNPLYMMVLRVVNQDEKSFAIGVQFLLMRLLAWLPS 568
Query: 1052 XXXXXAGIDSTCLFWSTFC-GEQGACVLYDNVAYRYLYVSIAIALKSFAFILYTTTWQCL 1228
ID +C+ WS C G +GACV YDN A R Y+ + +A K+ +L +
Sbjct: 569 PALYGLTIDYSCILWSAKCSGRRGACVYYDNNALRNRYLGLQVAYKALGSVLLIFISWRV 628
Query: 1229 RKNYKRYIKNHEGGL 1273
+KN + ++ GL
Sbjct: 629 KKNKEYNVQEKAAGL 643
>ref|NP_001178438.1| solute carrier organic anion transporter family member 1C1 [Bos
taurus].
Length = 728
Score = 174 bits (441), Expect = 2e-43
Identities = 116/404 (28%), Positives = 181/404 (44%), Gaps = 19/404 (4%)
Frame = +2
Query: 2 YVDAVFIDTSNLDITPDDPRWIXXXXXXXXXXXXXXXXXXXXXXXXPQSLP-PHS--DPA 172
YVD F++ ++ ITP DP+W+ P++LP P S D +
Sbjct: 250 YVDIGFVNLDHITITPKDPQWVGAWWLGYLIAGSITLLAAVPFWCLPRTLPRPRSREDSS 309
Query: 173 LESEQA---MLPEREYERPKPSNGVLRHPLEPDTSASCFQQLRVIPKVTKHLLSNPVFTC 343
SE++ M +Y+ P P A + R K L NPV+
Sbjct: 310 SSSEKSKFIMDDHTDYQTP------------PGEKAKIMEMARDFLPSLKSLFGNPVYFL 357
Query: 344 IILAACMEIAVVAGFAAFLGKYLEQQFNLTTSSANQLLGMTAIPCACLGIFXXXXXXXXX 523
+ A+ ++ + G + KY+EQQ+ + S AN ++G+ IP LGIF
Sbjct: 358 YLCASTVQFNSLFGMVTYKPKYIEQQYGQSASKANFVIGLINIPAVALGIFSGGIVMKKF 417
Query: 524 XXXXXXXIRMAMLVNLVSTACYVSFLFLGCDTGPVAGVTVPYGNTSAPGSTLDP--YSPC 697
++ + +++ ++S LGC+ VAG+T+ Y T P S + +S C
Sbjct: 418 RISIRGAAKLYLGSSVLGYLLFLSLFALGCENSDVAGLTISYQGTK-PVSYHERALFSDC 476
Query: 698 NKNCECQTDSFTPVCGADGITYLSACFAGCNSTNLTG-------CAC--LTTVPPENATV 850
N C+C + P+CG +GITY SAC AGC +T +G C C L N+T
Sbjct: 477 NSRCKCSETKWEPICGENGITYASACLAGCQTTTGSGKTTVFNNCTCVGLAASKSGNSTG 536
Query: 851 VPGKCPSP-GCQEAFLTFLCVMCVCSMIGAMAQTPSVIILIRTVSPELKSYAXXXXXXXX 1027
+ G+C GC + FL FL + + S ++ P I+L+R + P+LKS+A
Sbjct: 537 MVGRCQKDNGCAKMFLYFLVIAVITSYTLSVGGIPGYILLLRCIKPQLKSFALGIYTLAV 596
Query: 1028 XXXXXXXXXXXXXAGIDSTCLFWS-TFCGEQGACVLYDNVAYRY 1156
ID++CL W CG +G+C LYD+ A+RY
Sbjct: 597 RVLAGIPSPIYFGVLIDTSCLKWGFKRCGSKGSCRLYDSNAFRY 640
>ref|XP_002687789.1| PREDICTED: solute carrier organic anion transporter family, member
1C1 isoform 1 [Bos taurus].
Length = 728
Score = 174 bits (441), Expect = 2e-43
Identities = 116/404 (28%), Positives = 181/404 (44%), Gaps = 19/404 (4%)
Frame = +2
Query: 2 YVDAVFIDTSNLDITPDDPRWIXXXXXXXXXXXXXXXXXXXXXXXXPQSLP-PHS--DPA 172
YVD F++ ++ ITP DP+W+ P++LP P S D +
Sbjct: 250 YVDIGFVNLEHITITPKDPQWVGAWWLGYLIAGSITLLAAVPFWCLPRTLPRPRSREDSS 309
Query: 173 LESEQA---MLPEREYERPKPSNGVLRHPLEPDTSASCFQQLRVIPKVTKHLLSNPVFTC 343
SE++ M +Y+ P P A + R K L NPV+
Sbjct: 310 SSSEKSKFIMDDHTDYQTP------------PGEKAKIMEMARDFLPSLKSLFGNPVYFL 357
Query: 344 IILAACMEIAVVAGFAAFLGKYLEQQFNLTTSSANQLLGMTAIPCACLGIFXXXXXXXXX 523
+ A+ ++ + G + KY+EQQ+ + S AN ++G+ IP LGIF
Sbjct: 358 YLCASTVQFNSLFGMVTYKPKYIEQQYGQSASKANFVIGLINIPAVALGIFSGGIVMKKF 417
Query: 524 XXXXXXXIRMAMLVNLVSTACYVSFLFLGCDTGPVAGVTVPYGNTSAPGSTLDP--YSPC 697
++ + +++ ++S LGC+ VAG+T+ Y T P S + +S C
Sbjct: 418 RISICGAAKLYLGSSVLGYLLFLSLFALGCENSDVAGLTISYQGTK-PVSYHERALFSDC 476
Query: 698 NKNCECQTDSFTPVCGADGITYLSACFAGCNSTNLTG-------CAC--LTTVPPENATV 850
N C+C + P+CG +GITY SAC AGC +T +G C C L N+T
Sbjct: 477 NSRCKCSETKWEPICGENGITYASACLAGCQTTTGSGKTTVFNNCTCVGLAASKSGNSTG 536
Query: 851 VPGKCPSP-GCQEAFLTFLCVMCVCSMIGAMAQTPSVIILIRTVSPELKSYAXXXXXXXX 1027
+ G+C GC + FL FL + + S ++ P I+L+R + P+LKS+A
Sbjct: 537 MVGRCQKDNGCAKMFLYFLVIAVITSYTLSVGGIPGYILLLRCIKPQLKSFALGIYTLAV 596
Query: 1028 XXXXXXXXXXXXXAGIDSTCLFWS-TFCGEQGACVLYDNVAYRY 1156
ID++CL W CG +G+C LYD+ A+RY
Sbjct: 597 RVLAGIPSPIYFGVLIDTSCLKWGFKRCGSKGSCRLYDSNAFRY 640
>ref|NP_991373.1| solute carrier organic anion transporter family, member 1B3 [Bos
taurus].
Length = 689
Score = 165 bits (417), Expect = 1e-40
Identities = 107/427 (25%), Positives = 186/427 (43%), Gaps = 13/427 (3%)
Frame = +2
Query: 2 YVDAVFIDTSNLDITPDDPRWIXXXXXXXXXXXXXXXXXXXXXXXXPQSL-PPHSDPALE 178
YVD ++D S + ITP D RW+ P++L P+ +
Sbjct: 236 YVDIGYVDLSTIRITPKDSRWVGAWWLGFLAAGLIAIISSIPFFFLPKTLNKPNKEKKAS 295
Query: 179 SEQAMLPEREYERPKPSNGVLRHPLEPDTSASCFQQLRVIPKVTKHLLSNPVFTCIILAA 358
+ LP + E+ + ++ DT Q L K +L+NP++ +
Sbjct: 296 ASSVSLPMKNEEKSQMASLTKTGQNVTDTVTGFLQSL-------KSILTNPLYVLTLFLT 348
Query: 359 CMEIAVVAGFAAFLGKYLEQQFNLTTSSANQLLGMTAIPCACLGIFXXXXXXXXXXXXXX 538
++ + G ++ KY+EQQ+ + S + LLG +IP G+F
Sbjct: 349 LLQASSHIGSITYVFKYVEQQYGNSASETSILLGFISIPSLAAGMFTGGFIVKKFKFTLV 408
Query: 539 XXIRMAMLVNLVSTACYVSFLFLGCDTGPVAGVTVPY-GNTSAPGSTLDPYSPCNKNCEC 715
+ ++ ++ S ++ L C+ VAG+T+ Y GNT P S CN +C C
Sbjct: 409 GIAKFSLCAHMTSFLFHLINFALICENKSVAGLTLTYDGNTPVASHVNVPLSYCNSDCNC 468
Query: 716 QTDSFTPVCGADGITYLSACFAGCNSTN-------LTGCACL--TTVPPENATVVPGKCP 868
+ P+CG++GITY+S C AGC S++ C+C+ +N ++ G+CP
Sbjct: 469 DPTQWEPLCGSNGITYMSPCLAGCTSSSGSKKSIVFHNCSCVEENGFQSKNNSMKLGECP 528
Query: 869 -SPGCQEAFLTFLCVMCVCSMIGAMAQTPSVIILIRTVSPELKSYAXXXXXXXXXXXXXX 1045
S C+ F ++ V + A+ T +++++ + V PELKS A
Sbjct: 529 KSDDCKRKFYIYIVVQILTLFSAALGSTSNIMLIFKNVEPELKSLAMGFHSLTIRTLGGI 588
Query: 1046 XXXXXXXAGIDSTCLFWS-TFCGEQGACVLYDNVAYRYLYVSIAIALKSFAFILYTTTWQ 1222
A ID C+ WS G+QG+C LY+++ Y + + + LK A +L+
Sbjct: 589 PAPIYFGALIDRACMKWSINNYGKQGSCRLYNSLLYGHTFFGLTTGLKFPALVLFVVLIF 648
Query: 1223 CLRKNYK 1243
++K Y+
Sbjct: 649 AMKKKYQ 655
>ref|NP_001179775.1| solute carrier organic anion transporter family member 4C1 [Bos
taurus].
Length = 716
Score = 164 bits (416), Expect = 2e-40
Identities = 112/400 (28%), Positives = 170/400 (42%), Gaps = 15/400 (3%)
Frame = +2
Query: 32 NLDITPDDPRWIXXXXXXXXXXXXXXXXXXXXXXXXPQSLPPHSDPALESEQAMLPEREY 211
++DIT DDPRW+ P+ LP A + E +
Sbjct: 289 SIDITEDDPRWLGAWWIGFLISWLLAWSLIIPFSCFPKHLPG---------TAKIQEGKV 339
Query: 212 ERPKPSNGVLRHPLEPDTSASCFQQLRVIPKVTKHLLSNPVFTCIILAACMEIAVVAGFA 391
+ S + T + Q + P K+L+ N VF C++L+ C E + GFA
Sbjct: 340 SQTHQSASLQA------TDGNFGQSFKDFPAALKNLMRNTVFMCLVLSTCSEALITTGFA 393
Query: 392 AFLGKYLEQQFNLTTSSANQLLGMTAIPCACLGIFXXXXXXXXXXXXXXXXIRMAMLVNL 571
FL K++E QF L++SSA L G IP A LG ++ A+L ++
Sbjct: 394 TFLPKFIENQFGLSSSSAATLAGTVLIPGAALGQILGGVLVSKFKMMCKNIMKFALLTSV 453
Query: 572 VSTACYVSFLFLGCDTGPVAGVTVPYGNTSAPGSTLDPYSPCNKNCECQTDSFTPVCGAD 751
+S F + C+ P AGV+ Y T G+ +PCN +C C + PVCG +
Sbjct: 454 ISLVLTFVFAYANCENEPFAGVSESYNGTGELGNLT---APCNAHCNCLRSYYYPVCGGN 510
Query: 752 GITYLSACFAGCNST-------NLTGCACL-----TTVPPENATV--VPGKCPSPGCQEA 889
G+ Y S C+AGC + C+C+ T P + ++ GKC S C+
Sbjct: 511 GVQYFSPCYAGCTQSVSKIHPKVYYNCSCIEGEIHITPTPSSVSLEAQAGKCSSQ-CKN- 568
Query: 890 FLTFLCVMCVCSMIGAMAQTPSVIILIRTVSPELKSYAXXXXXXXXXXXXXXXXXXXXXA 1069
FL V + MA TP + ++R V+ +S A +
Sbjct: 569 LPPFLGVFFAAIVFTFMAGTPITVSILRCVNQRQRSLALGIQCTLLRLLGTIPGPIIFGS 628
Query: 1070 GIDSTCLFWS-TFCGEQGACVLYDNVAYRYLYVSIAIALK 1186
IDSTC+ W CG +GAC +Y+NV Y+ V+I++ K
Sbjct: 629 TIDSTCILWDINECGNKGACWIYNNVRMAYMLVAISVICK 668
>ref|XP_002689453.1| PREDICTED: solute carrier organic anion transporter family, member
4C1 [Bos taurus].
Length = 716
Score = 164 bits (416), Expect = 2e-40
Identities = 112/400 (28%), Positives = 170/400 (42%), Gaps = 15/400 (3%)
Frame = +2
Query: 32 NLDITPDDPRWIXXXXXXXXXXXXXXXXXXXXXXXXPQSLPPHSDPALESEQAMLPEREY 211
++DIT DDPRW+ P+ LP A + E +
Sbjct: 289 SIDITEDDPRWLGAWWIGFLISWLLAWSLIIPFSCFPKHLPG---------TAKIQEGKV 339
Query: 212 ERPKPSNGVLRHPLEPDTSASCFQQLRVIPKVTKHLLSNPVFTCIILAACMEIAVVAGFA 391
+ S + T + Q + P K+L+ N VF C++L+ C E + GFA
Sbjct: 340 SQTHQSASLQA------TDGNFGQSFKDFPAALKNLMRNTVFMCLVLSTCSEALITTGFA 393
Query: 392 AFLGKYLEQQFNLTTSSANQLLGMTAIPCACLGIFXXXXXXXXXXXXXXXXIRMAMLVNL 571
FL K++E QF L++SSA L G IP A LG ++ A+L ++
Sbjct: 394 TFLPKFIENQFGLSSSSAATLAGTVLIPGAALGQILGGVLVSKFKMMCKNIMKFALLTSV 453
Query: 572 VSTACYVSFLFLGCDTGPVAGVTVPYGNTSAPGSTLDPYSPCNKNCECQTDSFTPVCGAD 751
+S F + C+ P AGV+ Y T G+ +PCN +C C + PVCG +
Sbjct: 454 ISLVLTFVFAYANCENEPFAGVSESYNGTGELGNLT---APCNAHCNCLRSYYYPVCGGN 510
Query: 752 GITYLSACFAGCNST-------NLTGCACL-----TTVPPENATV--VPGKCPSPGCQEA 889
G+ Y S C+AGC + C+C+ T P + ++ GKC S C+
Sbjct: 511 GVQYFSPCYAGCTQSVSKIHPKVYYNCSCIEGEIHITPTPSSVSLEAQAGKCSSQ-CKN- 568
Query: 890 FLTFLCVMCVCSMIGAMAQTPSVIILIRTVSPELKSYAXXXXXXXXXXXXXXXXXXXXXA 1069
FL V + MA TP + ++R V+ +S A +
Sbjct: 569 LPPFLGVFFAAIVFTFMAGTPITVSILRCVNQRQRSLALGIQCTLLRLLGTIPGPIIFGS 628
Query: 1070 GIDSTCLFWS-TFCGEQGACVLYDNVAYRYLYVSIAIALK 1186
IDSTC+ W CG +GAC +Y+NV Y+ V+I++ K
Sbjct: 629 TIDSTCILWDINECGNKGACWIYNNVRMAYMLVAISVICK 668
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 67,706,403
Number of extensions: 1881344
Number of successful extensions: 8233
Number of sequences better than 1.0e-05: 17
Number of HSP's gapped: 8083
Number of HSP's successfully gapped: 17
Length of query: 603
Length of database: 17,681,374
Length adjustment: 108
Effective length of query: 495
Effective length of database: 14,107,870
Effective search space: 6983395650
Effective search space used: 6983395650
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-003789
(1811 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_851063.1| PREDICTED: similar to Solute carrier organic an... 726 0.0
Alignment gi|NP_001011558.1| solute carrier organic anion transporter fam... 172 1e-42
Alignment gi|XP_852867.1| PREDICTED: similar to Solute carrier organic an... 170 4e-42
Alignment gi|XP_535098.2| PREDICTED: similar to organic anion transporter... 167 4e-41
Alignment gi|NP_001159519.1| solute carrier organic anion transporter fam... 161 2e-39
Alignment gi|XP_866443.1| PREDICTED: similar to Solute carrier organic an... 160 3e-39
Alignment gi|XP_546002.2| PREDICTED: similar to solute carrier organic an... 160 5e-39
Alignment gi|XP_852839.1| PREDICTED: similar to organic anion transportin... 158 2e-38
Alignment gi|XP_866385.1| PREDICTED: similar to organic anion transportin... 158 2e-38
Alignment gi|XP_543087.2| PREDICTED: similar to Solute carrier organic an... 151 2e-36
>ref|XP_851063.1| PREDICTED: similar to Solute carrier organic anion transporter
family, member 3A1 (Solute carrier family 21, member 11)
(Sodium-independent organic anion transporter D) (Organic
anion transporting polypeptide D) (OATP-D) (Organic anion
transporter polypeptide... [Canis familiaris].
Length = 842
Score = 726 bits (1874), Expect = 0.0
Identities = 358/427 (83%), Positives = 362/427 (84%)
Frame = +2
Query: 2 YVDAVFIDTSNLDITPDDPRWIXXXXXXXXXXXXXXXXXXXXXXXXPQSLPPHSDPALES 181
YVDAVFIDTSNLDITPDDPRWI PQSLPPHSDPA+ES
Sbjct: 390 YVDAVFIDTSNLDITPDDPRWIGAWWGGFLLCGALLFFSSLLMFGFPQSLPPHSDPAMES 449
Query: 182 EQAMLPEREYERPKPSNGVLRHPLEPDTSASCFQQLRVIPKVTKHLLSNPVFTCIILAAC 361
EQAMLPEREYERPKPSNGVLRHPLEPD+SASCFQQL+VIPKVTKHLLSNPVFTCIILAAC
Sbjct: 450 EQAMLPEREYERPKPSNGVLRHPLEPDSSASCFQQLKVIPKVTKHLLSNPVFTCIILAAC 509
Query: 362 MEIAVVAGFAAFLGKYLEQQFNLTTSSANQLLGMTAIPCACLGIFXXXXXXXXXXXXXXX 541
MEIAVVAGFAAFLGKYLEQQFNLTTSSANQLLGMTAIPCACLGIF
Sbjct: 510 MEIAVVAGFAAFLGKYLEQQFNLTTSSANQLLGMTAIPCACLGIFLGGLLVKKLSLSALG 569
Query: 542 XIRMAMLVNLVSTACYVSFLFLGCDTGPVAGVTVPYGNTSAPGSTLDPYSPCNKNCECQT 721
IRMAMLVNLVSTACYVSFLFLGCDTGPVAGVTVPYGNTSAPGS LDPYSPCNKNCECQT
Sbjct: 570 AIRMAMLVNLVSTACYVSFLFLGCDTGPVAGVTVPYGNTSAPGSALDPYSPCNKNCECQT 629
Query: 722 DSFTPVCGADGITYLSACFAGCNSTNLTGCACLTTVPPENATVVPGKCPSPGCQEAFLTF 901
DSFTPVCGADGITYLSACFAGCNSTNLTGCACLTTVPPEN TVVPGKCPSPGCQEAFLTF
Sbjct: 630 DSFTPVCGADGITYLSACFAGCNSTNLTGCACLTTVPPENTTVVPGKCPSPGCQEAFLTF 689
Query: 902 LCVMCVCSMIGAMAQTPSVIILIRTVSPELKSYAXXXXXXXXXXXXXXXXXXXXXAGIDS 1081
LCVMCVCSMIGAMAQTPSVIILIRTVSPELKSYA AGIDS
Sbjct: 690 LCVMCVCSMIGAMAQTPSVIILIRTVSPELKSYALGVLFLLLRLLGFIPPPLIFGAGIDS 749
Query: 1082 TCLFWSTFCGEQGACVLYDNVAYRYLYVSIAIALKSFAFILYTTTWQCLRKNYKRYIKNH 1261
TCLFWSTFCGEQGACVLYDNVAYRYLYVSIAI LKS AF+LYTTTWQCLRKNYKRYIKNH
Sbjct: 750 TCLFWSTFCGEQGACVLYDNVAYRYLYVSIAIVLKSSAFVLYTTTWQCLRKNYKRYIKNH 809
Query: 1262 EGGLSTS 1282
EGGLSTS
Sbjct: 810 EGGLSTS 816
>ref|NP_001011558.1| solute carrier organic anion transporter family member 2A1 [Canis
lupus familiaris].
Length = 644
Score = 172 bits (435), Expect = 1e-42
Identities = 124/437 (28%), Positives = 197/437 (45%), Gaps = 13/437 (2%)
Frame = +2
Query: 2 YVDAVFIDTSNLDITPDDPRWIXXXXXXXXXXXXXXXXXXXXXXXXPQSLPPHSDPALES 181
+VD +DT+ ++++P DPRWI SL S P
Sbjct: 233 FVDYGRVDTAAVNLSPGDPRWIGAWWLGLLISSA--------------SLVLTSFPFFFF 278
Query: 182 EQAMLPEREYERPKPSNGVLRHPLEPDTSASCFQQLRVIPKVTKHLLSNPVFTCIILAAC 361
+AML RE ER R E +S ++ P++ LL NP+F ++LA C
Sbjct: 279 PRAML--REAERSPAIVDEARKMDEAKPRSSLVDFIKRFPRIFLKLLMNPLFMLVVLAQC 336
Query: 362 MEIAVVAGFAAFLGKYLEQQFNLTTSSANQLLGMTAIPCACLGIFXXXXXXXXXXXXXXX 541
+V+AG + FL K+LE+Q+ + + AN L+G +P A LG+
Sbjct: 337 TFSSVIAGLSTFLNKFLEKQYGASAAYANFLIGAVNLPAAALGMLFGGILMKRFVFSLQT 396
Query: 542 XIRMAMLVNLVSTACYVSFLFLGCDTGPVAGVTVPYGNTSAPGSTLDPYSP-CNKNCECQ 718
R+A + +S F+GC T VA V P TS+P + P P C ++C C
Sbjct: 397 IPRVAATIITISMILCAPLFFMGCSTPTVAEVYPP--RTSSP---IHPQPPACRRHCSCP 451
Query: 719 TDSFTPVCGADGITYLSACFAGCNSTNLT----------GCACLTTVPPENATVVPGKCP 868
F PVCG +G+ YLS C AGC+ N+T C+C+T +A+ G CP
Sbjct: 452 DSIFHPVCGDNGVEYLSPCHAGCSEINVTSIASKQLMYLNCSCVTGA---SASAKTGSCP 508
Query: 869 SPGCQEAFLTFLCVMCVCSMIGAMAQTPSVIILIRTVSPELKSYAXXXXXXXXXXXXXXX 1048
P C L + ++ ++I ++ P ++++R V+ E KS+A
Sbjct: 509 IP-CAHFLLPAIFLISFVALIACISHNPLYMMVLRVVNQEEKSFAIGVQFLLMRLLAWLP 567
Query: 1049 XXXXXXAGIDSTCLFWSTFC-GEQGACVLYDNVAYRYLYVSIAIALKSF-AFILYTTTWQ 1222
ID +C+ W+ C G +GAC YDN A R Y+ + + K+ A +L +W+
Sbjct: 568 SPALYGLTIDYSCIKWNFQCSGRRGACAYYDNDALRDRYLGLQVGYKALGALLLLFISWR 627
Query: 1223 CLRKNYKRYIKNHEGGL 1273
++K+ + ++ GL
Sbjct: 628 -VKKSKEYNVQEKAAGL 643
>ref|XP_852867.1| PREDICTED: similar to Solute carrier organic anion transporter
family, member 1C1 (Solute carrier family 21, member 14)
(Organic anion transporter F) (OATP-F) (Organic anion
transporting polypeptide 14) (Organic anion transporter
polypeptide related protein 5... iso [Canis familiaris].
Length = 712
Score = 170 bits (431), Expect = 4e-42
Identities = 113/431 (26%), Positives = 192/431 (44%), Gaps = 19/431 (4%)
Frame = +2
Query: 2 YVDAVFIDTSNLDITPDDPRWIXXXXXXXXXXXXXXXXXXXXXXXXPQSLP---PHSDPA 172
YVD F++ ++ ITP D +W+ P+SLP D
Sbjct: 250 YVDIGFVNLDHVTITPKDSQWVGAWWLGYLIAGIVSLLAAVPFWCLPKSLPRLRSREDSN 309
Query: 173 LESEQA---MLPEREYERPKPSNGVLRHPLEPDTSASCFQQLRVIPKVTKHLLSNPVFTC 343
SE++ M +Y+ P + + R ++L NP++
Sbjct: 310 SSSEKSKFIMDDHTDYQTPLGEKSKI------------MEMARDFLPSLRNLFGNPLYLL 357
Query: 344 IILAACMEIAVVAGFAAFLGKYLEQQFNLTTSSANQLLGMTAIPCACLGIFXXXXXXXXX 523
+ A+ ++ + G + KY+EQQ+ ++S AN ++G+ IP LGIF
Sbjct: 358 YLCASTVQFNSLFGMVTYKPKYIEQQYGQSSSKANFVIGLINIPAVALGIFSGGIIMKKF 417
Query: 524 XXXXXXXIRMAMLVNLVSTACYVSFLFLGCDTGPVAGVTVPYGNTSAPGSTLDP--YSPC 697
++ + +++ ++S LGC+ VAG+TV Y T P S + +S C
Sbjct: 418 RISVYGAAKLYLGSSVLGYLLFLSLFALGCENSDVAGLTVSYQGTK-PVSYHERALFSDC 476
Query: 698 NKNCECQTDSFTPVCGADGITYLSACFAGCNSTNLTG-------CACLTTVPPE--NATV 850
N C+C + PVCG +GITY SAC AGC ++ +G C C+ + N++
Sbjct: 477 NSRCKCSETKWEPVCGENGITYASACLAGCQTSIRSGKTLIFYNCTCVEIAASKSGNSSG 536
Query: 851 VPGKCPSP-GCQEAFLTFLCVMCVCSMIGAMAQTPSVIILIRTVSPELKSYAXXXXXXXX 1027
+ G+C GC + FL FL + + S ++ P ++L+R + P+LKS+A
Sbjct: 537 MVGRCQKDNGCPKMFLYFLVISVITSYTLSLGGIPGYMLLLRCIKPQLKSFALGIYTLAI 596
Query: 1028 XXXXXXXXXXXXXAGIDSTCLFWS-TFCGEQGACVLYDNVAYRYLYVSIAIALKSFAFIL 1204
ID++CL W CG +G+C LYD+ A+R++Y+ + + L + + L
Sbjct: 597 RVLAGIPAPMYFGILIDTSCLKWGFKRCGSRGSCRLYDSNAFRHIYLGLTVMLGTVSIFL 656
Query: 1205 YTTTWQCLRKN 1237
L+KN
Sbjct: 657 SIAVLFTLKKN 667
>ref|XP_535098.2| PREDICTED: similar to organic anion transporter polypeptide-related
protein 4 [Canis familiaris].
Length = 851
Score = 167 bits (422), Expect = 4e-41
Identities = 115/442 (26%), Positives = 195/442 (44%), Gaps = 37/442 (8%)
Frame = +2
Query: 17 FIDTSN-LDITPDDPRWIXXXXXXXXXXXXXXXXXXXXXXXXPQSLPPHSDPALESEQA- 190
++D N +++ +DPR+I P+ LPP + + +
Sbjct: 330 YVDPRNPVNLDQNDPRFIGNWWSGFLLCAIAMFLVIFPMFTFPKKLPPRHKKKKKKKFSA 389
Query: 191 -MLPEREYERPKPSNGVLRHPLEPDTSASCF-QQLRVIPKVTKHLLSNPVFTCIILAACM 364
++ + + + K +N ++ S+ F + +R +P+ +LSN F + L+
Sbjct: 390 DVVSDDDVMKEKSNNS---EQVDKKVSSMGFGKNVRDLPRAAVRILSNMTFLFVSLSYTA 446
Query: 365 EIAVVAGFAAFLGKYLEQQFNLTTSSANQLLGMTAIPCACLGIFXXXXXXXXXXXXXXXX 544
E A+V F F+ K++E QF + S+A+ G+ +P A +GI
Sbjct: 447 ESAIVTAFITFIPKFIESQFGIPASNASIYTGVIIVPSAGVGIVLGGYIIKKLKLGARES 506
Query: 545 IRMAMLVNLVSTACYVSFLFLGCDTGPVAGVTVPYGNTSAPGSTLDPYS---PCNKNCEC 715
++AM+ + VS C+ + +GC++ + G+ +PY T+ P T+ + CN NC C
Sbjct: 507 AKLAMICSGVSLLCFSTLFIVGCESINLGGINIPY--TTGPSLTMPHRNLTGSCNVNCGC 564
Query: 716 QTDSFTPVCGADGITYLSACFAGC-NSTNL-------TGCACLTT----VPP-------- 835
+ + PVCG+DGITY + C AGC NS NL T C C+ + PP
Sbjct: 565 KIHEYEPVCGSDGITYFNPCLAGCVNSGNLSTGIRNYTECTCVQSRQVITPPTVGQRGQL 624
Query: 836 ----------ENATVVPGKCPSPGCQEAFLTFLCVMCVCSMIGAMAQTPSVIILIRTVSP 985
EN V GKC C + FL + + + I A AQ ++I+ +R+V
Sbjct: 625 RVVIVKTYLNENGYAVSGKC-KRAC-NTLIPFLIFLFIVTFITACAQPSAIIVTLRSVED 682
Query: 986 ELKSYAXXXXXXXXXXXXXXXXXXXXXAGIDSTCLFWSTFCGEQGACVLYDNVAYRYLYV 1165
E + +A A ID+TC+ W CG QG+C Y+ ++R++Y
Sbjct: 683 EERPFALGMQFVLLRTLAYIPTPIYFGAVIDTTCMLWQQECGVQGSCWEYNVTSFRFVYF 742
Query: 1166 SIAIALKSFAFILYTTTWQCLR 1231
+A LK FI W ++
Sbjct: 743 GLAAGLKFVGFIFIFLAWYSIK 764
>ref|NP_001159519.1| solute carrier organic anion transporter family, member 1B3 [Canis
lupus familiaris].
Length = 692
Score = 161 bits (407), Expect = 2e-39
Identities = 122/469 (26%), Positives = 197/469 (42%), Gaps = 19/469 (4%)
Frame = +2
Query: 2 YVDAVFIDTSNLDITPDDPRWIXXXXXXXXXXXXXXXXXXXXXXXXPQSLPPHSDPALES 181
YVD ++D S++ ITP D RW+ P+ L
Sbjct: 234 YVDIGYVDLSDIRITPKDSRWVGAWWLGFLVAGILSIMSSIPFFFLPRDLNKPQQEKKNL 293
Query: 182 EQAMLPEREYERPKPSNGVLRHPLEPDTSASCFQQLRVIPKVTKHLLSNPVFTCIILAAC 361
L + ER + +N FQ L K +L+NP++ +
Sbjct: 294 TSLHLLKTNEERSQMTNVTNHGQSLSGNITGFFQSL-------KSILTNPLYVILQFLTL 346
Query: 362 MEIAVVAGFAAFLGKYLEQQFNLTTSSANQLLGMTAIPCACLGIFXXXXXXXXXXXXXXX 541
+ + G ++ KY+EQQ+ + S AN LG +P GIF
Sbjct: 347 LLASSHIGAITYVFKYVEQQYGQSASEANIWLGTITLPTVATGIFVGGYITKKFKLTLLG 406
Query: 542 XIRMAMLVNLVSTACYVSFLFLGCDTGPVAGVTVPY-GNTSAPGSTLDPYSPCNKNCECQ 718
+++ +L+S + L C++ PVAG+T+ Y GN P S CN NC C
Sbjct: 407 IAKLSFCTSLLSFLFQLLTFALICESKPVAGLTLTYDGNNPVTSPINVPLSYCNSNCNCD 466
Query: 719 TDSFTPVCGADGITYLSACFAGCNSTN-------LTGCAC--LTTVPPENATVVPGKCPS 871
+ + PVCG GITY+S C AGC S++ C+C +T V +N +V G+CP
Sbjct: 467 ENDWEPVCGDSGITYMSPCLAGCKSSSGSKKSMVFHNCSCVEVTGVQNKNNSVNLGECPR 526
Query: 872 PG-CQEAFLTFLCVMCVCSMIGAMAQTPSVIILIRTVSPELKSYAXXXXXXXXXXXXXXX 1048
C++ F + V + ++ P+++++ + V PELKS A
Sbjct: 527 DSQCRKKFYIYALVQVLNYFFSSLGSIPTIMLVFKNVQPELKSLAVGFHSLTIRALGGIP 586
Query: 1049 XXXXXXAGIDSTCLFWST-FCGEQGACVLYDNVAYRYLYVSIAIALKSFAFILYTTTWQC 1225
A ID C+ WST CG+ G C +Y++ Y ++S+ +LK + L+
Sbjct: 587 APIYFGALIDRACMKWSTSSCGKPGFCRMYNSTLYGNTFLSLIESLKFASLTLHAVLIIT 646
Query: 1226 LRKNYK-RYIKNHEGGLSTSEFFASTLTLDNLGRDP--VPA----NQTH 1351
++K Y+ + K E G + + L++L D VP+ N+TH
Sbjct: 647 MKKIYQGKDTKASENGRKDT----NEANLESLNNDGYFVPSAREDNETH 691
>ref|XP_866443.1| PREDICTED: similar to Solute carrier organic anion transporter
family, member 1C1 (Solute carrier family 21, member 14)
(Organic anion transporter F) (OATP-F) (Organic anion
transporting polypeptide 14) (Organic anion transporter
polypeptide related protein 5... iso [Canis familiaris].
Length = 607
Score = 160 bits (406), Expect = 3e-39
Identities = 93/322 (28%), Positives = 159/322 (49%), Gaps = 13/322 (4%)
Frame = +2
Query: 311 KHLLSNPVFTCIILAACMEIAVVAGFAAFLGKYLEQQFNLTTSSANQLLGMTAIPCACLG 490
++L NP++ + A+ ++ + G + KY+EQQ+ ++S AN ++G+ IP LG
Sbjct: 242 RNLFGNPLYLLYLCASTVQFNSLFGMVTYKPKYIEQQYGQSSSKANFVIGLINIPAVALG 301
Query: 491 IFXXXXXXXXXXXXXXXXIRMAMLVNLVSTACYVSFLFLGCDTGPVAGVTVPYGNTSAPG 670
IF ++ + +++ ++S LGC+ VAG+TV Y T P
Sbjct: 302 IFSGGIIMKKFRISVYGAAKLYLGSSVLGYLLFLSLFALGCENSDVAGLTVSYQGTK-PV 360
Query: 671 STLDP--YSPCNKNCECQTDSFTPVCGADGITYLSACFAGCNSTNLTG-------CACLT 823
S + +S CN C+C + PVCG +GITY SAC AGC ++ +G C C+
Sbjct: 361 SYHERALFSDCNSRCKCSETKWEPVCGENGITYASACLAGCQTSIRSGKTLIFYNCTCVE 420
Query: 824 TVPPE--NATVVPGKCPSP-GCQEAFLTFLCVMCVCSMIGAMAQTPSVIILIRTVSPELK 994
+ N++ + G+C GC + FL FL + + S ++ P ++L+R + P+LK
Sbjct: 421 IAASKSGNSSGMVGRCQKDNGCPKMFLYFLVISVITSYTLSLGGIPGYMLLLRCIKPQLK 480
Query: 995 SYAXXXXXXXXXXXXXXXXXXXXXAGIDSTCLFWS-TFCGEQGACVLYDNVAYRYLYVSI 1171
S+A ID++CL W CG +G+C LYD+ A+R++Y+ +
Sbjct: 481 SFALGIYTLAIRVLAGIPAPMYFGILIDTSCLKWGFKRCGSRGSCRLYDSNAFRHIYLGL 540
Query: 1172 AIALKSFAFILYTTTWQCLRKN 1237
+ L + + L L+KN
Sbjct: 541 TVMLGTVSIFLSIAVLFTLKKN 562
>ref|XP_546002.2| PREDICTED: similar to solute carrier organic anion transporter
family, member 6A1 [Canis familiaris].
Length = 1141
Score = 160 bits (404), Expect = 5e-39
Identities = 104/338 (30%), Positives = 155/338 (45%), Gaps = 22/338 (6%)
Frame = +2
Query: 260 DTSASCFQQLRVIPKVTKHLLSNPVFTCIILAACMEIAVVAGFAAFLGKYLEQQFNLTTS 439
DT + L+ P K+L+ N VF C++L+ E + GFA FL K++E QF L++S
Sbjct: 775 DTEENFGTSLKDFPTALKNLMGNTVFMCLVLSTSSEALITTGFATFLPKFIENQFGLSSS 834
Query: 440 SANQLLGMTAIPCACLGIFXXXXXXXXXXXXXXXXIRMAMLVNLVSTACYVSFLFLGCDT 619
A L G IP A LG ++ A+L +LV+ A F++ C+
Sbjct: 835 FAATLAGAVLIPGAALGQILGGVLVSKLKMTCKNTMKFALLTSLVAFALSFVFVYANCEN 894
Query: 620 GPVAGVTVPYGNTSAPGSTLDPYSPCNKNCECQTDSFTPVCGADGITYLSACFAGC-NST 796
P AGV+ Y T G+ +PCN NC C + P+CG DGI Y S CFAGC NST
Sbjct: 895 EPFAGVSESYNGTGNLGNLT---APCNSNCHCLRSYYYPICGGDGIQYFSPCFAGCANST 951
Query: 797 N------LTGCACL-------TTVPPENATVVPGKCPSPGCQEAFLTFLCVMCVCSMIGA 937
+ C+C+ T+ + GKC + C + FL ++ +
Sbjct: 952 SKRHPKVYHNCSCIERNVEITPTLASFDFEAKAGKCEN-RCANLPI-FLGILFATIVFTF 1009
Query: 938 MAQTPSVIILIRTVSPELKSYAXXXXXXXXXXXXXXXXXXXXXAGIDSTCLFWS-TFCGE 1114
MA TP + ++R V + +S A IDSTC+ W CG
Sbjct: 1010 MAGTPITVSILRCVHHKQRSLALGIQFMLLRLLGTIPGPIIFGVTIDSTCILWDINECGA 1069
Query: 1115 QGACVLYDNVAYRYLYVSIAIALKS-------FAFILY 1207
+GAC +Y+N+ ++ V+I++ K+ FA LY
Sbjct: 1070 KGACWIYNNIKMAHMLVAISVTCKTITIFFNGFAVFLY 1107
Score = 114 bits (286), Expect = 2e-25
Identities = 79/299 (26%), Positives = 128/299 (42%), Gaps = 14/299 (4%)
Frame = +2
Query: 317 LLSNPVFTCIILAACMEIAVVAGFAAFLGKYLEQQFNLTTSSANQLLGMTAIPCACLGIF 496
LL +P+F C+ L E V G + FL Y+E QF LT S+A ++ G + LG
Sbjct: 364 LLKSPLFICLALTKASESLVYIGASEFLPIYIENQFILTHSTATKIAGFVLLLGGALGQL 423
Query: 497 XXXXXXXXXXXXXXXXIRMAMLVNLVSTACYVSFLFLGCDTGPVAGVTVPYGNTSAPGST 676
+R M+ +++S + +F+ C P+AG+ Y T G+
Sbjct: 424 LGGIIASMLHMSCKALMRFVMVTSVISLIFFGFVIFVHCGPVPLAGINEDYDGTGHLGNL 483
Query: 677 LDPYSPCNKNCECQTDSFTPVCGADGITYLSACFAGCNSTN-------LTGCAC----LT 823
+PCN +C+C + ++ VCG D I Y S CFAGC + C+C LT
Sbjct: 484 T---APCNSHCKCSSSFYSAVCGRDNIAYFSPCFAGCTQSKTFNYHKAYYNCSCIQEGLT 540
Query: 824 TVPPENATV--VPGKCPSPGCQEAFLTFLCVMCVCSMIGAMAQTPSVIILIRTVSPELKS 997
T + + PG C + C + L F+ + + ++ PS + ++R V +
Sbjct: 541 TSDDQGDFIDARPGTCDTK-CYKLPL-FVAFIFSTILFSIFSRIPSTLTILRIVPDNQRY 598
Query: 998 YAXXXXXXXXXXXXXXXXXXXXXAGIDSTCLFWST-FCGEQGACVLYDNVAYRYLYVSI 1171
A D++C+F T +CG +G C +Y+ + YL V I
Sbjct: 599 LALGLTYVILRIFGTIPGPILFRMAGDTSCIFRVTEYCGNKGNCWIYNKLKMAYLMVGI 657
>ref|XP_852839.1| PREDICTED: similar to organic anion transporting polypeptide A
isoform a isoform 2 [Canis familiaris].
Length = 650
Score = 158 bits (399), Expect = 2e-38
Identities = 109/415 (26%), Positives = 178/415 (42%), Gaps = 15/415 (3%)
Frame = +2
Query: 2 YVDAVFIDTSNLDITPDDPRWIXXXXXXXXXXXXXXXXXXXXXXXXPQSLPPHSDPALES 181
YVD ++T +L ITP D RW+ P++LP L++
Sbjct: 201 YVDTGSVNTDDLTITPTDTRWVGAWWFGFLICAGVNVLTAIPFFFLPKTLPKEG---LKN 257
Query: 182 EQAMLPEREYERPKPSNGVLRHPLEPDTSASCFQQLRVIPKVTKHLLSNPVFTCIILAAC 361
++ + E+ + + + + D +P + K LL NP++ IL +
Sbjct: 258 NADIIKNDKEEKQREAVKKEKDGITKD----------FLPFM-KSLLCNPIYMLFILISI 306
Query: 362 MEIAVVAGFAAFLGKYLEQQFNLTTSSANQLLGMTAIPCACLGIFXXXXXXXXXXXXXXX 541
++ F+ KYLEQQ+ + S A L+G+ +P C+G
Sbjct: 307 VQFNAFVNMFTFMPKYLEQQYGKSASEAIFLIGIYNLPPICIGYIAGGLIMKKFKITVKQ 366
Query: 542 XIRMAMLVNLVSTACYVSFLFLGCDTGPVAGVTVPYGNTSAPGSTLDPY------SPCNK 703
+ ++L+ + + CD VAG+T Y G D Y + CNK
Sbjct: 367 AAHIGCWLSLIEYLLHFLCFLMICDNTSVAGITTTY-----KGIQQDLYVENTILADCNK 421
Query: 704 NCECQTDSFTPVCGADGITYLSACFAGCNSTNLTG-------CACLTTVPPENATVVPGK 862
+C C + PVCG +G++Y+SAC AGC ++ TG C+C+ T N++ V G
Sbjct: 422 DCNCPIKMWDPVCGNNGVSYMSACLAGCETSVGTGINMVFQNCSCIQT--SGNSSAVLGL 479
Query: 863 CPSP-GCQEAFLTFLCVMCVCSMIGAMAQTPSVIILIRTVSPELKSYAXXXXXXXXXXXX 1039
C C FL + + S I +++ P ++L+R + PE KS
Sbjct: 480 CDKGYDCSMMLQYFLILSAIGSFIYSLSAIPGYMVLLRCIKPEEKSLGVGLHTFCTRVFA 539
Query: 1040 XXXXXXXXXAGIDSTCLFWSTF-CGEQGACVLYDNVAYRYLYVSIAIALKSFAFI 1201
A +DSTCL W CGE GAC +YD+ +RY+Y+ + AL+ ++I
Sbjct: 540 GIPAPIYFGALVDSTCLHWGMLKCGESGACRIYDSTNFRYIYLGLPAALRGTSYI 594
>ref|XP_866385.1| PREDICTED: similar to organic anion transporting polypeptide A
isoform a isoform 4 [Canis familiaris].
Length = 653
Score = 158 bits (399), Expect = 2e-38
Identities = 109/415 (26%), Positives = 178/415 (42%), Gaps = 15/415 (3%)
Frame = +2
Query: 2 YVDAVFIDTSNLDITPDDPRWIXXXXXXXXXXXXXXXXXXXXXXXXPQSLPPHSDPALES 181
YVD ++T +L ITP D RW+ P++LP L++
Sbjct: 204 YVDTGSVNTDDLTITPTDTRWVGAWWFGFLICAGVNVLTAIPFFFLPKTLPKEG---LKN 260
Query: 182 EQAMLPEREYERPKPSNGVLRHPLEPDTSASCFQQLRVIPKVTKHLLSNPVFTCIILAAC 361
++ + E+ + + + + D +P + K LL NP++ IL +
Sbjct: 261 NADIIKNDKEEKQREAVKKEKDGITKD----------FLPFM-KSLLCNPIYMLFILISI 309
Query: 362 MEIAVVAGFAAFLGKYLEQQFNLTTSSANQLLGMTAIPCACLGIFXXXXXXXXXXXXXXX 541
++ F+ KYLEQQ+ + S A L+G+ +P C+G
Sbjct: 310 VQFNAFVNMFTFMPKYLEQQYGKSASEAIFLIGIYNLPPICIGYIAGGLIMKKFKITVKQ 369
Query: 542 XIRMAMLVNLVSTACYVSFLFLGCDTGPVAGVTVPYGNTSAPGSTLDPY------SPCNK 703
+ ++L+ + + CD VAG+T Y G D Y + CNK
Sbjct: 370 AAHIGCWLSLIEYLLHFLCFLMICDNTSVAGITTTY-----KGIQQDLYVENTILADCNK 424
Query: 704 NCECQTDSFTPVCGADGITYLSACFAGCNSTNLTG-------CACLTTVPPENATVVPGK 862
+C C + PVCG +G++Y+SAC AGC ++ TG C+C+ T N++ V G
Sbjct: 425 DCNCPIKMWDPVCGNNGVSYMSACLAGCETSVGTGINMVFQNCSCIQT--SGNSSAVLGL 482
Query: 863 CPSP-GCQEAFLTFLCVMCVCSMIGAMAQTPSVIILIRTVSPELKSYAXXXXXXXXXXXX 1039
C C FL + + S I +++ P ++L+R + PE KS
Sbjct: 483 CDKGYDCSMMLQYFLILSAIGSFIYSLSAIPGYMVLLRCIKPEEKSLGVGLHTFCTRVFA 542
Query: 1040 XXXXXXXXXAGIDSTCLFWSTF-CGEQGACVLYDNVAYRYLYVSIAIALKSFAFI 1201
A +DSTCL W CGE GAC +YD+ +RY+Y+ + AL+ ++I
Sbjct: 543 GIPAPIYFGALVDSTCLHWGMLKCGESGACRIYDSTNFRYIYLGLPAALRGTSYI 597
>ref|XP_543087.2| PREDICTED: similar to Solute carrier organic anion transporter
family, member 4A1 (Solute carrier family 21, member 12)
(Sodium-independent organic anion transporter E) (Organic
anion transporting polypeptide E) (OATP-E) (Colon organic
anion transporter) (Org... [Canis familiaris].
Length = 808
Score = 151 bits (382), Expect = 2e-36
Identities = 99/325 (30%), Positives = 148/325 (45%), Gaps = 17/325 (5%)
Frame = +2
Query: 287 LRVIPKVTKHLLSNPVFTCIILAACMEIAVVAGFAAFLGKYLEQQFNLTTSSANQLLGMT 466
+R +P LL NP F + LA E ++AG + F K+LE QF+L+ S A L G
Sbjct: 448 IRDLPLSIWLLLRNPTFILLCLAGATEATLIAGMSTFGPKFLEAQFSLSASEAATLFGYL 507
Query: 467 AIPCACLGIFXXXXXXXXXXXXXXXXIRMAMLVNLVSTACYVSFLFLGCDTGPVAGVTVP 646
+P G F I++ +L L S + F F+ C P+AGVT
Sbjct: 508 VVPAGGGGTFLGGFFVNKFKLRGAGIIKLCLLCTLTSLLAFFVF-FIHCPNVPMAGVTAS 566
Query: 647 YGNTSAPGSTLDPYSPCNKNCECQTDSFTPVCGADGITYLSACFAGCNSTNLTG------ 808
+ + P LD +PCN +C C+ + ++PVCG+DG+TY S C AGC +
Sbjct: 567 HSGSLLPDGHLDLTAPCNADCACRPEHYSPVCGSDGLTYYSPCHAGCPGAAVPSPGGQKV 626
Query: 809 ---CACLTTVPPENAT-----VVPGKCPSPGCQE--AFLTFLCVMCVCSMIGAMAQTPSV 958
C+C+ P+N + GKC S CQ L F+ V+ + + + ++ P++
Sbjct: 627 YRDCSCV----PQNFSSGFGHATAGKCTST-CQRKPLLLVFIFVVIIFTFLSSI---PAL 678
Query: 959 IILIRTVSPELKSYAXXXXXXXXXXXXXXXXXXXXXAGIDSTCLFWSTFCGEQGACVLYD 1138
+R V KS+A ID CL W CG+QG+C +Y
Sbjct: 679 TATLRCVRDRQKSFALGIQWIVVRTLGGIPGPIAFGWVIDRACLLWQDQCGQQGSCFVYQ 738
Query: 1139 NVAY-RYLYVSIAIALKSFAFILYT 1210
N A RY+ VS +A K F+ +T
Sbjct: 739 NAAMSRYMLVS-GLAYKVLGFLFFT 762
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 70,186,558
Number of extensions: 1885793
Number of successful extensions: 8554
Number of sequences better than 1.0e-05: 13
Number of HSP's gapped: 8394
Number of HSP's successfully gapped: 14
Length of query: 603
Length of database: 18,874,504
Length adjustment: 109
Effective length of query: 494
Effective length of database: 15,240,880
Effective search space: 7528994720
Effective search space used: 7528994720
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-003789
(1811 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_037404.2| solute carrier organic anion transporter family... 811 0.0
Alignment gi|NP_001138516.1| solute carrier organic anion transporter fam... 718 0.0
Alignment gi|NP_001139417.1| solute carrier organic anion transporter fam... 185 1e-46
Alignment gi|NP_059131.1| solute carrier organic anion transporter family... 185 1e-46
Alignment gi|NP_062818.1| solute carrier organic anion transporter family... 176 8e-44
Alignment gi|NP_006437.3| solute carrier organic anion transporter family... 174 3e-43
Alignment gi|NP_001139416.1| solute carrier organic anion transporter fam... 173 5e-43
Alignment gi|NP_001139418.1| solute carrier organic anion transporter fam... 173 5e-43
Alignment gi|NP_005621.2| solute carrier organic anion transporter family... 168 2e-41
Alignment gi|NP_066580.1| solute carrier organic anion transporter family... 165 1e-40
>ref|NP_037404.2| solute carrier organic anion transporter family member 3A1 isoform 1
[Homo sapiens].
Length = 710
Score = 811 bits (2095), Expect = 0.0
Identities = 398/471 (84%), Positives = 405/471 (85%)
Frame = +2
Query: 2 YVDAVFIDTSNLDITPDDPRWIXXXXXXXXXXXXXXXXXXXXXXXXPQSLPPHSDPALES 181
YVDAVFIDTSNLDITPDDPRWI PQSLPPHS+PA+ES
Sbjct: 240 YVDAVFIDTSNLDITPDDPRWIGAWWGGFLLCGALLFFSSLLMFGFPQSLPPHSEPAMES 299
Query: 182 EQAMLPEREYERPKPSNGVLRHPLEPDTSASCFQQLRVIPKVTKHLLSNPVFTCIILAAC 361
EQAML EREYERPKPSNGVLRHPLEPD+SASCFQQLRVIPKVTKHLLSNPVFTCIILAAC
Sbjct: 300 EQAMLSEREYERPKPSNGVLRHPLEPDSSASCFQQLRVIPKVTKHLLSNPVFTCIILAAC 359
Query: 362 MEIAVVAGFAAFLGKYLEQQFNLTTSSANQLLGMTAIPCACLGIFXXXXXXXXXXXXXXX 541
MEIAVVAGFAAFLGKYLEQQFNLTTSSANQLLGMTAIPCACLGIF
Sbjct: 360 MEIAVVAGFAAFLGKYLEQQFNLTTSSANQLLGMTAIPCACLGIFLGGLLVKKLSLSALG 419
Query: 542 XIRMAMLVNLVSTACYVSFLFLGCDTGPVAGVTVPYGNTSAPGSTLDPYSPCNKNCECQT 721
IRMAMLVNLVSTACYVSFLFLGCDTGPVAGVTVPYGN++APGS LDPYSPCN NCECQT
Sbjct: 420 AIRMAMLVNLVSTACYVSFLFLGCDTGPVAGVTVPYGNSTAPGSALDPYSPCNNNCECQT 479
Query: 722 DSFTPVCGADGITYLSACFAGCNSTNLTGCACLTTVPPENATVVPGKCPSPGCQEAFLTF 901
DSFTPVCGADGITYLSACFAGCNSTNLTGCACLTTVP ENATVVPGKCPSPGCQEAFLTF
Sbjct: 480 DSFTPVCGADGITYLSACFAGCNSTNLTGCACLTTVPAENATVVPGKCPSPGCQEAFLTF 539
Query: 902 LCVMCVCSMIGAMAQTPSVIILIRTVSPELKSYAXXXXXXXXXXXXXXXXXXXXXAGIDS 1081
LCVMC+CS+IGAMAQTPSVIILIRTVSPELKSYA AGIDS
Sbjct: 540 LCVMCICSLIGAMAQTPSVIILIRTVSPELKSYALGVLFLLLRLLGFIPPPLIFGAGIDS 599
Query: 1082 TCLFWSTFCGEQGACVLYDNVAYRYLYVSIAIALKSFAFILYTTTWQCLRKNYKRYIKNH 1261
TCLFWSTFCGEQGACVLYDNV YRYLYVSIAIALKSFAFILYTTTWQCLRKNYKRYIKNH
Sbjct: 600 TCLFWSTFCGEQGACVLYDNVVYRYLYVSIAIALKSFAFILYTTTWQCLRKNYKRYIKNH 659
Query: 1262 EGGLSTSEFFASTLTLDNLGRDPVPANQTHRTKFIYNLEDHEWCENMESVL 1414
EGGLSTSEFFASTLTLDNLGRDPVPANQTHRTKFIYNLEDHEWCENMESVL
Sbjct: 660 EGGLSTSEFFASTLTLDNLGRDPVPANQTHRTKFIYNLEDHEWCENMESVL 710
>ref|NP_001138516.1| solute carrier organic anion transporter family member 3A1 isoform 2
[Homo sapiens].
Length = 692
Score = 718 bits (1854), Expect = 0.0
Identities = 354/427 (82%), Positives = 361/427 (84%)
Frame = +2
Query: 2 YVDAVFIDTSNLDITPDDPRWIXXXXXXXXXXXXXXXXXXXXXXXXPQSLPPHSDPALES 181
YVDAVFIDTSNLDITPDDPRWI PQSLPPHS+PA+ES
Sbjct: 240 YVDAVFIDTSNLDITPDDPRWIGAWWGGFLLCGALLFFSSLLMFGFPQSLPPHSEPAMES 299
Query: 182 EQAMLPEREYERPKPSNGVLRHPLEPDTSASCFQQLRVIPKVTKHLLSNPVFTCIILAAC 361
EQAML EREYERPKPSNGVLRHPLEPD+SASCFQQLRVIPKVTKHLLSNPVFTCIILAAC
Sbjct: 300 EQAMLSEREYERPKPSNGVLRHPLEPDSSASCFQQLRVIPKVTKHLLSNPVFTCIILAAC 359
Query: 362 MEIAVVAGFAAFLGKYLEQQFNLTTSSANQLLGMTAIPCACLGIFXXXXXXXXXXXXXXX 541
MEIAVVAGFAAFLGKYLEQQFNLTTSSANQLLGMTAIPCACLGIF
Sbjct: 360 MEIAVVAGFAAFLGKYLEQQFNLTTSSANQLLGMTAIPCACLGIFLGGLLVKKLSLSALG 419
Query: 542 XIRMAMLVNLVSTACYVSFLFLGCDTGPVAGVTVPYGNTSAPGSTLDPYSPCNKNCECQT 721
IRMAMLVNLVSTACYVSFLFLGCDTGPVAGVTVPYGN++APGS LDPYSPCN NCECQT
Sbjct: 420 AIRMAMLVNLVSTACYVSFLFLGCDTGPVAGVTVPYGNSTAPGSALDPYSPCNNNCECQT 479
Query: 722 DSFTPVCGADGITYLSACFAGCNSTNLTGCACLTTVPPENATVVPGKCPSPGCQEAFLTF 901
DSFTPVCGADGITYLSACFAGCNSTNLTGCACLTTVP ENATVVPGKCPSPGCQEAFLTF
Sbjct: 480 DSFTPVCGADGITYLSACFAGCNSTNLTGCACLTTVPAENATVVPGKCPSPGCQEAFLTF 539
Query: 902 LCVMCVCSMIGAMAQTPSVIILIRTVSPELKSYAXXXXXXXXXXXXXXXXXXXXXAGIDS 1081
LCVMC+CS+IGAMAQTPSVIILIRTVSPELKSYA AGIDS
Sbjct: 540 LCVMCICSLIGAMAQTPSVIILIRTVSPELKSYALGVLFLLLRLLGFIPPPLIFGAGIDS 599
Query: 1082 TCLFWSTFCGEQGACVLYDNVAYRYLYVSIAIALKSFAFILYTTTWQCLRKNYKRYIKNH 1261
TCLFWSTFCGEQGACVLYDNV YRYLYVSIAIALKSFAFILYTTTWQCLRKNYKRYIKNH
Sbjct: 600 TCLFWSTFCGEQGACVLYDNVVYRYLYVSIAIALKSFAFILYTTTWQCLRKNYKRYIKNH 659
Query: 1262 EGGLSTS 1282
EGGLSTS
Sbjct: 660 EGGLSTS 666
>ref|NP_001139417.1| solute carrier organic anion transporter family member 1C1 isoform 3
[Homo sapiens].
Length = 663
Score = 185 bits (469), Expect = 1e-46
Identities = 119/452 (26%), Positives = 206/452 (45%), Gaps = 23/452 (5%)
Frame = +2
Query: 2 YVDAVFIDTSNLDITPDDPRWIXXXXXXXXXXXXXXXXXXXXXXXXPQSLP-----PHSD 166
YVD F++ ++ ITP DP+W+ P+SLP S+
Sbjct: 201 YVDIGFVNLDHITITPKDPQWVGAWWLGYLIAGIISLLAAVPFWYLPKSLPRSQSREDSN 260
Query: 167 PALESEQAMLPER-EYERPKPSNGVLRHPLEPDTSASCFQQLRVIPKVTKHLLSNPVFTC 343
+ E + ++ + +Y+ P+ N A + R K+L NPV+
Sbjct: 261 SSSEKSKFIIDDHTDYQTPQGEN------------AKIMEMARDFLPSLKNLFGNPVYFL 308
Query: 344 IILAACMEIAVVAGFAAFLGKYLEQQFNLTTSSANQLLGMTAIPCACLGIFXXXXXXXXX 523
+ + ++ + G + KY+EQQ+ ++S AN ++G+ IP LGIF
Sbjct: 309 YLCTSTVQFNSLFGMVTYKPKYIEQQYGQSSSRANFVIGLINIPAVALGIFSGGIVMKKF 368
Query: 524 XXXXXXXIRMAMLVNLVSTACYVSFLFLGCDTGPVAGVTVPYGNTSAPGSTLDP--YSPC 697
++ + ++ ++S LGC+ VAG+TV Y T P S + +S C
Sbjct: 369 RISVCGAAKLYLGSSVFGYLLFLSLFALGCENSDVAGLTVSYQGTK-PVSYHERALFSDC 427
Query: 698 NKNCECQTDSFTPVCGADGITYLSACFAGCNSTNLTG-------CACLTTVPPE--NATV 850
N C+C + P+CG +GITY+SAC AGC ++N +G C C+ + N++
Sbjct: 428 NSRCKCSETKWEPMCGENGITYVSACLAGCQTSNRSGKNIIFYNCTCVGIAASKSGNSSG 487
Query: 851 VPGKCPSP-GCQEAFLTFLCVMCVCSMIGAMAQTPSVIILIRTVSPELKSYAXXXXXXXX 1027
+ G+C GC + FL FL + + S ++ P I+L+R + P+LKS+A
Sbjct: 488 IVGRCQKDNGCPQMFLYFLVISVITSYTLSLGGIPGYILLLRCIKPQLKSFALGIYTLAI 547
Query: 1028 XXXXXXXXXXXXXAGIDSTCLFWS-TFCGEQGACVLYDNVAYRYLYVSIAIALKSFAFIL 1204
ID++CL W CG +G+C LYD+ +R++Y+ + + L + + +L
Sbjct: 548 RVLAGIPAPVYFGVLIDTSCLKWGFKRCGSRGSCRLYDSNVFRHIYLGLTVILGTVSILL 607
Query: 1205 YTTTWQCLRKNY----KRYIKNHEGGLSTSEF 1288
L+KNY + +I E + ++ F
Sbjct: 608 SIAVLFILKKNYVSKHRSFITKRERTMVSTRF 639
>ref|NP_059131.1| solute carrier organic anion transporter family member 1C1 isoform 2
[Homo sapiens].
Length = 712
Score = 185 bits (469), Expect = 1e-46
Identities = 119/452 (26%), Positives = 206/452 (45%), Gaps = 23/452 (5%)
Frame = +2
Query: 2 YVDAVFIDTSNLDITPDDPRWIXXXXXXXXXXXXXXXXXXXXXXXXPQSLP-----PHSD 166
YVD F++ ++ ITP DP+W+ P+SLP S+
Sbjct: 250 YVDIGFVNLDHITITPKDPQWVGAWWLGYLIAGIISLLAAVPFWYLPKSLPRSQSREDSN 309
Query: 167 PALESEQAMLPER-EYERPKPSNGVLRHPLEPDTSASCFQQLRVIPKVTKHLLSNPVFTC 343
+ E + ++ + +Y+ P+ N A + R K+L NPV+
Sbjct: 310 SSSEKSKFIIDDHTDYQTPQGEN------------AKIMEMARDFLPSLKNLFGNPVYFL 357
Query: 344 IILAACMEIAVVAGFAAFLGKYLEQQFNLTTSSANQLLGMTAIPCACLGIFXXXXXXXXX 523
+ + ++ + G + KY+EQQ+ ++S AN ++G+ IP LGIF
Sbjct: 358 YLCTSTVQFNSLFGMVTYKPKYIEQQYGQSSSRANFVIGLINIPAVALGIFSGGIVMKKF 417
Query: 524 XXXXXXXIRMAMLVNLVSTACYVSFLFLGCDTGPVAGVTVPYGNTSAPGSTLDP--YSPC 697
++ + ++ ++S LGC+ VAG+TV Y T P S + +S C
Sbjct: 418 RISVCGAAKLYLGSSVFGYLLFLSLFALGCENSDVAGLTVSYQGTK-PVSYHERALFSDC 476
Query: 698 NKNCECQTDSFTPVCGADGITYLSACFAGCNSTNLTG-------CACLTTVPPE--NATV 850
N C+C + P+CG +GITY+SAC AGC ++N +G C C+ + N++
Sbjct: 477 NSRCKCSETKWEPMCGENGITYVSACLAGCQTSNRSGKNIIFYNCTCVGIAASKSGNSSG 536
Query: 851 VPGKCPSP-GCQEAFLTFLCVMCVCSMIGAMAQTPSVIILIRTVSPELKSYAXXXXXXXX 1027
+ G+C GC + FL FL + + S ++ P I+L+R + P+LKS+A
Sbjct: 537 IVGRCQKDNGCPQMFLYFLVISVITSYTLSLGGIPGYILLLRCIKPQLKSFALGIYTLAI 596
Query: 1028 XXXXXXXXXXXXXAGIDSTCLFWS-TFCGEQGACVLYDNVAYRYLYVSIAIALKSFAFIL 1204
ID++CL W CG +G+C LYD+ +R++Y+ + + L + + +L
Sbjct: 597 RVLAGIPAPVYFGVLIDTSCLKWGFKRCGSRGSCRLYDSNVFRHIYLGLTVILGTVSILL 656
Query: 1205 YTTTWQCLRKNY----KRYIKNHEGGLSTSEF 1288
L+KNY + +I E + ++ F
Sbjct: 657 SIAVLFILKKNYVSKHRSFITKRERTMVSTRF 688
>ref|NP_062818.1| solute carrier organic anion transporter family member 1B3 [Homo
sapiens].
Length = 702
Score = 176 bits (445), Expect = 8e-44
Identities = 115/427 (26%), Positives = 192/427 (44%), Gaps = 13/427 (3%)
Frame = +2
Query: 2 YVDAVFIDTSNLDITPDDPRWIXXXXXXXXXXXXXXXXXXXXXXXXPQSL-PPHSDPALE 178
YVD ++D S + ITP D RW+ P++ P + +
Sbjct: 234 YVDIGYVDLSTIRITPKDSRWVGAWWLGFLVSGLFSIISSIPFFFLPKNPNKPQKERKIS 293
Query: 179 SEQAMLPEREYERPKPSNGVLRHPLEPDTSASCFQQLRVIPKVTKHLLSNPVFTCIILAA 358
+L + +R + +N + FQ L K +L+NP++ +L
Sbjct: 294 LSLHVLKTND-DRNQTANLTNQGKNVTKNVTGFFQSL-------KSILTNPLYVIFLLLT 345
Query: 359 CMEIAVVAGFAAFLGKYLEQQFNLTTSSANQLLGMTAIPCACLGIFXXXXXXXXXXXXXX 538
++++ G ++ KY+EQQ+ + S AN LLG+ IP G+F
Sbjct: 346 LLQVSSFIGSFTYVFKYMEQQYGQSASHANFLLGIITIPTVATGMFLGGFIIKKFKLSLV 405
Query: 539 XXIRMAMLVNLVSTACYVSFLFLGCDTGPVAGVTVPYGNTSAPGSTLD-PYSPCNKNCEC 715
+ + L +++S + + L C++ VAG+T+ Y ++ S +D P S CN C C
Sbjct: 406 GIAKFSFLTSMISFLFQLLYFPLICESKSVAGLTLTYDGNNSVASHVDVPLSYCNSECNC 465
Query: 716 QTDSFTPVCGADGITYLSACFAGCNS-------TNLTGCAC--LTTVPPENATVVPGKCP 868
+ PVCG +GITYLS C AGC S T C+C +T + N + G+CP
Sbjct: 466 DESQWEPVCGNNGITYLSPCLAGCKSSSGIKKHTVFYNCSCVEVTGLQNRNYSAHLGECP 525
Query: 869 SPG-CQEAFLTFLCVMCVCSMIGAMAQTPSVIILIRTVSPELKSYAXXXXXXXXXXXXXX 1045
C F ++ + + S+ A T +++ ++ V PELK+ A
Sbjct: 526 RDNTCTRKFFIYVAIQVINSLFSATGGTTFILLTVKIVQPELKALAMGFQSMVIRTLGGI 585
Query: 1046 XXXXXXXAGIDSTCLFWST-FCGEQGACVLYDNVAYRYLYVSIAIALKSFAFILYTTTWQ 1222
A ID TC+ WST CG QGAC +Y++V + +Y+ ++IAL+ A +LY
Sbjct: 586 LAPIYFGALIDKTCMKWSTNSCGAQGACRIYNSVFFGRVYLGLSIALRFPALVLYIVFIF 645
Query: 1223 CLRKNYK 1243
++K ++
Sbjct: 646 AMKKKFQ 652
>ref|NP_006437.3| solute carrier organic anion transporter family member 1B1 [Homo
sapiens].
Length = 691
Score = 174 bits (440), Expect = 3e-43
Identities = 119/433 (27%), Positives = 196/433 (45%), Gaps = 19/433 (4%)
Frame = +2
Query: 2 YVDAVFIDTSNLDITPDDPRWIXXXXXXXXXXXXXXXXXXXXXXXXPQSLPPHSDPALES 181
YVD ++D S + ITP D RW+ PQ+ P+
Sbjct: 234 YVDIGYVDLSTIRITPTDSRWVGAWWLNFLVSGLFSIISSIPFFFLPQT--PNK------ 285
Query: 182 EQAMLPEREYERPKPSNGVLRHPLEPDTSASCFQQLRVIPK-VT------KHLLSNPVFT 340
P++E + S VL E D +A+ Q + I K VT K +L+NP++
Sbjct: 286 -----PQKE-RKASLSLHVLETNDEKDQTANLTNQGKNITKNVTGFFQSFKSILTNPLYV 339
Query: 341 CIILAACMEIAVVAGFAAFLGKYLEQQFNLTTSSANQLLGMTAIPCACLGIFXXXXXXXX 520
+L ++++ G ++ KY+EQQ+ +S AN LLG+ IP G+F
Sbjct: 340 MFVLLTLLQVSSYIGAFTYVFKYVEQQYGQPSSKANILLGVITIPIFASGMFLGGYIIKK 399
Query: 521 XXXXXXXXIRMAMLVNLVSTACYVSFLFLGCDTGPVAGVTVPYGNTSAPGSTLD-PYSPC 697
+ + ++S + Y+ + F+ C+ VAG+T+ Y + S D P S C
Sbjct: 400 FKLNTVGIAKFSCFTAVMSLSFYLLYFFILCENKSVAGLTMTYDGNNPVTSHRDVPLSYC 459
Query: 698 NKNCECQTDSFTPVCGADGITYLSACFAGCNSTN-------LTGCACL--TTVPPENATV 850
N +C C + PVCG +GITY+S C AGC S++ C+CL T + N +
Sbjct: 460 NSDCNCDESQWEPVCGNNGITYISPCLAGCKSSSGNKKPIVFYNCSCLEVTGLQNRNYSA 519
Query: 851 VPGKCP-SPGCQEAFLTFLCVMCVCSMIGAMAQTPSVIILIRTVSPELKSYAXXXXXXXX 1027
G+CP C F F+ + + A+ T V+++++ V PELKS A
Sbjct: 520 HLGECPRDDACTRKFYFFVAIQVLNLFFSALGGTSHVMLIVKIVQPELKSLALGFHSMVI 579
Query: 1028 XXXXXXXXXXXXXAGIDSTCLFWST-FCGEQGACVLYDNVAYRYLYVSIAIALKSFAFIL 1204
A ID+TC+ WST CG +G+C Y++ ++ +Y+ ++ L+ + +L
Sbjct: 580 RALGGILAPIYFGALIDTTCIKWSTNNCGTRGSCRTYNSTSFSRVYLGLSSMLRVSSLVL 639
Query: 1205 YTTTWQCLRKNYK 1243
Y ++K Y+
Sbjct: 640 YIILIYAMKKKYQ 652
>ref|NP_001139416.1| solute carrier organic anion transporter family member 1C1 isoform 4
[Homo sapiens].
Length = 612
Score = 173 bits (438), Expect = 5e-43
Identities = 112/409 (27%), Positives = 185/409 (45%), Gaps = 19/409 (4%)
Frame = +2
Query: 2 YVDAVFIDTSNLDITPDDPRWIXXXXXXXXXXXXXXXXXXXXXXXXPQSLP-----PHSD 166
YVD F++ ++ ITP DP+W+ P+SLP S+
Sbjct: 132 YVDIGFVNLDHITITPKDPQWVGAWWLGYLIAGIISLLAAVPFWYLPKSLPRSQSREDSN 191
Query: 167 PALESEQAMLPER-EYERPKPSNGVLRHPLEPDTSASCFQQLRVIPKVTKHLLSNPVFTC 343
+ E + ++ + +Y+ P+ N A + R K+L NPV+
Sbjct: 192 SSSEKSKFIIDDHTDYQTPQGEN------------AKIMEMARDFLPSLKNLFGNPVYFL 239
Query: 344 IILAACMEIAVVAGFAAFLGKYLEQQFNLTTSSANQLLGMTAIPCACLGIFXXXXXXXXX 523
+ + ++ + G + KY+EQQ+ ++S AN ++G+ IP LGIF
Sbjct: 240 YLCTSTVQFNSLFGMVTYKPKYIEQQYGQSSSRANFVIGLINIPAVALGIFSGGIVMKKF 299
Query: 524 XXXXXXXIRMAMLVNLVSTACYVSFLFLGCDTGPVAGVTVPYGNTSAPGSTLDP--YSPC 697
++ + ++ ++S LGC+ VAG+TV Y T P S + +S C
Sbjct: 300 RISVCGAAKLYLGSSVFGYLLFLSLFALGCENSDVAGLTVSYQGTK-PVSYHERALFSDC 358
Query: 698 NKNCECQTDSFTPVCGADGITYLSACFAGCNSTNLTG-------CACLTTVPPE--NATV 850
N C+C + P+CG +GITY+SAC AGC ++N +G C C+ + N++
Sbjct: 359 NSRCKCSETKWEPMCGENGITYVSACLAGCQTSNRSGKNIIFYNCTCVGIAASKSGNSSG 418
Query: 851 VPGKCPSP-GCQEAFLTFLCVMCVCSMIGAMAQTPSVIILIRTVSPELKSYAXXXXXXXX 1027
+ G+C GC + FL FL + + S ++ P I+L+R + P+LKS+A
Sbjct: 419 IVGRCQKDNGCPQMFLYFLVISVITSYTLSLGGIPGYILLLRCIKPQLKSFALGIYTLAI 478
Query: 1028 XXXXXXXXXXXXXAGIDSTCLFWS-TFCGEQGACVLYDNVAYRYLYVSI 1171
ID++CL W CG +G+C LYD+ +RY SI
Sbjct: 479 RVLAGIPAPVYFGVLIDTSCLKWGFKRCGSRGSCRLYDSNVFRYQIKSI 527
>ref|NP_001139418.1| solute carrier organic anion transporter family member 1C1 isoform 1
[Homo sapiens].
Length = 730
Score = 173 bits (438), Expect = 5e-43
Identities = 112/409 (27%), Positives = 185/409 (45%), Gaps = 19/409 (4%)
Frame = +2
Query: 2 YVDAVFIDTSNLDITPDDPRWIXXXXXXXXXXXXXXXXXXXXXXXXPQSLP-----PHSD 166
YVD F++ ++ ITP DP+W+ P+SLP S+
Sbjct: 250 YVDIGFVNLDHITITPKDPQWVGAWWLGYLIAGIISLLAAVPFWYLPKSLPRSQSREDSN 309
Query: 167 PALESEQAMLPER-EYERPKPSNGVLRHPLEPDTSASCFQQLRVIPKVTKHLLSNPVFTC 343
+ E + ++ + +Y+ P+ N A + R K+L NPV+
Sbjct: 310 SSSEKSKFIIDDHTDYQTPQGEN------------AKIMEMARDFLPSLKNLFGNPVYFL 357
Query: 344 IILAACMEIAVVAGFAAFLGKYLEQQFNLTTSSANQLLGMTAIPCACLGIFXXXXXXXXX 523
+ + ++ + G + KY+EQQ+ ++S AN ++G+ IP LGIF
Sbjct: 358 YLCTSTVQFNSLFGMVTYKPKYIEQQYGQSSSRANFVIGLINIPAVALGIFSGGIVMKKF 417
Query: 524 XXXXXXXIRMAMLVNLVSTACYVSFLFLGCDTGPVAGVTVPYGNTSAPGSTLDP--YSPC 697
++ + ++ ++S LGC+ VAG+TV Y T P S + +S C
Sbjct: 418 RISVCGAAKLYLGSSVFGYLLFLSLFALGCENSDVAGLTVSYQGTK-PVSYHERALFSDC 476
Query: 698 NKNCECQTDSFTPVCGADGITYLSACFAGCNSTNLTG-------CACLTTVPPE--NATV 850
N C+C + P+CG +GITY+SAC AGC ++N +G C C+ + N++
Sbjct: 477 NSRCKCSETKWEPMCGENGITYVSACLAGCQTSNRSGKNIIFYNCTCVGIAASKSGNSSG 536
Query: 851 VPGKCPSP-GCQEAFLTFLCVMCVCSMIGAMAQTPSVIILIRTVSPELKSYAXXXXXXXX 1027
+ G+C GC + FL FL + + S ++ P I+L+R + P+LKS+A
Sbjct: 537 IVGRCQKDNGCPQMFLYFLVISVITSYTLSLGGIPGYILLLRCIKPQLKSFALGIYTLAI 596
Query: 1028 XXXXXXXXXXXXXAGIDSTCLFWS-TFCGEQGACVLYDNVAYRYLYVSI 1171
ID++CL W CG +G+C LYD+ +RY SI
Sbjct: 597 RVLAGIPAPVYFGVLIDTSCLKWGFKRCGSRGSCRLYDSNVFRYQIKSI 645
>ref|NP_005621.2| solute carrier organic anion transporter family member 2A1 [Homo
sapiens].
Length = 643
Score = 168 bits (425), Expect = 2e-41
Identities = 118/438 (26%), Positives = 190/438 (43%), Gaps = 14/438 (3%)
Frame = +2
Query: 2 YVDAVFIDTSNLDITPDDPRWIXXXXXXXXXXXXXXXXXXXXXXXXPQSLPPHSD--PAL 175
+VD ++T+ +++ P DPRWI P+++P + PA
Sbjct: 233 FVDYGRVNTAAVNLVPGDPRWIGAWWLGLLISSALLVLTSFPFFFFPRAMPIGAKRAPAT 292
Query: 176 ESEQAMLPEREYERPKPSNGVLRHPLEPDTSASCFQQLRVIPKVTKHLLSNPVFTCIILA 355
E L E + + S ++ P + LL N +F ++LA
Sbjct: 293 ADEARKLEEAK------------------SRGSLVDFIKRFPCIFLRLLMNSLFVLVVLA 334
Query: 356 ACMEIAVVAGFAAFLGKYLEQQFNLTTSSANQLLGMTAIPCACLGIFXXXXXXXXXXXXX 535
C +V+AG + FL K+LE+Q+ + + AN L+G +P A LG+
Sbjct: 335 QCTFSSVIAGLSTFLNKFLEKQYGTSAAYANFLIGAVNLPAAALGMLFGGILMKRFVFSL 394
Query: 536 XXXIRMAMLVNLVSTACYVSFLFLGCDTGPVAGVTVPYGNTSAPGSTLDPYSP-CNKNCE 712
R+A + +S V F+GC T VA V P + S++ P SP C ++C
Sbjct: 395 QAIPRIATTIITISMILCVPLFFMGCSTPTVAEVYPP-----STSSSIHPQSPACRRDCS 449
Query: 713 CQTDSFTPVCGADGITYLSACFAGCNSTNLT----------GCACLTTVPPENATVVPGK 862
C F PVCG +GI YLS C AGC++ N++ C+C+T +A+ G
Sbjct: 450 CPDSIFHPVCGDNGIEYLSPCHAGCSNINMSSATSKQLIYLNCSCVT---GGSASAKTGS 506
Query: 863 CPSPGCQEAFLTFLCVMCVCSMIGAMAQTPSVIILIRTVSPELKSYAXXXXXXXXXXXXX 1042
CP P C L + ++ S+I ++ P ++++R V+ E KS+A
Sbjct: 507 CPVP-CAHFLLPAIFLISFVSLIACISHNPLYMMVLRVVNQEEKSFAIGVQFLLMRLLAW 565
Query: 1043 XXXXXXXXAGIDSTCLFWSTFC-GEQGACVLYDNVAYRYLYVSIAIALKSFAFILYTTTW 1219
ID +C+ W++ C G +GAC YDN A R Y+ + + K+ +L
Sbjct: 566 LPSPALYGLTIDHSCIRWNSLCLGRRGACAYYDNDALRDRYLGLQMGYKALGMLLLCFIS 625
Query: 1220 QCLRKNYKRYIKNHEGGL 1273
++KN K Y GL
Sbjct: 626 WRVKKN-KEYNVQKAAGL 642
>ref|NP_066580.1| solute carrier organic anion transporter family member 1A2 [Homo
sapiens].
Length = 670
Score = 165 bits (418), Expect = 1e-40
Identities = 112/415 (26%), Positives = 180/415 (43%), Gaps = 15/415 (3%)
Frame = +2
Query: 2 YVDAVFIDTSNLDITPDDPRWIXXXXXXXXXXXXXXXXXXXXXXXXPQSLPPHSDPALES 181
YVD F++T +L ITP D RW+ P +LP LE+
Sbjct: 221 YVDTGFVNTDDLIITPTDTRWVGAWWFGFLICAGVNVLTAIPFFFLPNTLPKEG---LET 277
Query: 182 EQAMLPEREYERPKPSNGVLRHPLEPDTSASCFQQLRVIPKVTKHLLSNPVFTCIILAAC 361
++ ++ K ++ + D +P + K L NP++ IL +
Sbjct: 278 NADIIKNENEDKQKEEVKKEKYGITKD----------FLPFM-KSLSCNPIYMLFILVSV 326
Query: 362 MEIAVVAGFAAFLGKYLEQQFNLTTSSANQLLGMTAIPCACLGIFXXXXXXXXXXXXXXX 541
++ +F+ KYLEQQ+ +++S A L+G+ +P C+G
Sbjct: 327 IQFNAFVNMISFMPKYLEQQYGISSSDAIFLMGIYNLPPICIGYIIGGLIMKKFKITVKQ 386
Query: 542 XIRMAMLVNLVSTACYVSFLFLGCDTGPVAGVTVPYGNTSAPGSTLDPY------SPCNK 703
+ ++L+ Y + C+ V G+ NTS G D Y + CN
Sbjct: 387 AAHIGCWLSLLEYLLYFLSFLMTCENSSVVGI-----NTSYEGIPQDLYVENDIFADCNV 441
Query: 704 NCECQTDSFTPVCGADGITYLSACFAGCNSTNLTG-------CACLTTVPPENATVVPGK 862
+C C + + PVCG +G++YLSAC AGC ++ TG C+C+ T N++ V G
Sbjct: 442 DCNCPSKIWDPVCGNNGLSYLSACLAGCETSIGTGINMVFQNCSCIQT--SGNSSAVLGL 499
Query: 863 C-PSPGCQEAFLTFLCVMCVCSMIGAMAQTPSVIILIRTVSPELKSYAXXXXXXXXXXXX 1039
C P C FL + + S I ++A P ++L+R + E KS
Sbjct: 500 CDKGPDCSLMLQYFLILSAMSSFIYSLAAIPGYMVLLRCMKSEEKSLGVGLHTFCTRVFA 559
Query: 1040 XXXXXXXXXAGIDSTCLFWSTF-CGEQGACVLYDNVAYRYLYVSIAIALKSFAFI 1201
A +DSTCL W T CGE GAC +YD+ +RY+Y+ + AL+ +F+
Sbjct: 560 GIPAPIYFGALMDSTCLHWGTLKCGESGACRIYDSTTFRYIYLGLPAALRGSSFV 614
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 68,962,452
Number of extensions: 1854496
Number of successful extensions: 8123
Number of sequences better than 1.0e-05: 21
Number of HSP's gapped: 7953
Number of HSP's successfully gapped: 21
Length of query: 603
Length of database: 18,297,164
Length adjustment: 108
Effective length of query: 495
Effective length of database: 14,737,052
Effective search space: 7294840740
Effective search space used: 7294840740
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-003789
(1811 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_076397.2| solute carrier organic anion transporter family... 808 0.0
Alignment gi|NP_001033732.1| solute carrier organic anion transporter fam... 717 0.0
Alignment gi|NP_067446.1| solute carrier organic anion transporter family... 181 2e-45
Alignment gi|NP_001171243.1| solute carrier organic anion transporter fam... 177 2e-44
Alignment gi|NP_201571.2| solute carrier organic anion transporter family... 174 2e-43
Alignment gi|NP_065241.1| solute carrier organic anion transporter family... 172 8e-43
Alignment gi|NP_766429.2| solute carrier organic anion transporter family... 165 1e-40
Alignment gi|NP_780525.1| solute carrier organic anion transporter family... 162 6e-40
Alignment gi|NP_038825.1| solute carrier organic anion transporter family... 160 2e-39
Alignment gi|NP_766246.1| solute carrier organic anion transporter family... 155 1e-37
>ref|NP_076397.2| solute carrier organic anion transporter family member 3A1 isoform 1
[Mus musculus].
Length = 710
Score = 808 bits (2086), Expect = 0.0
Identities = 397/471 (84%), Positives = 403/471 (85%)
Frame = +2
Query: 2 YVDAVFIDTSNLDITPDDPRWIXXXXXXXXXXXXXXXXXXXXXXXXPQSLPPHSDPALES 181
YVDAVFIDTSNLDITPDDPRWI PQSLPPHSDP +ES
Sbjct: 240 YVDAVFIDTSNLDITPDDPRWIGAWWGGFLLCGALLFFSSLLMFGFPQSLPPHSDPGMES 299
Query: 182 EQAMLPEREYERPKPSNGVLRHPLEPDTSASCFQQLRVIPKVTKHLLSNPVFTCIILAAC 361
EQAMLPEREYERPKPSNGVLRHPLEPD+SASCFQQLRVIPKVTKHLLSNPVFTCI+LAAC
Sbjct: 300 EQAMLPEREYERPKPSNGVLRHPLEPDSSASCFQQLRVIPKVTKHLLSNPVFTCIVLAAC 359
Query: 362 MEIAVVAGFAAFLGKYLEQQFNLTTSSANQLLGMTAIPCACLGIFXXXXXXXXXXXXXXX 541
MEIAVVAGFAAFLGKYLEQQFNLTTSSANQLLGMTAIPCACLGIF
Sbjct: 360 MEIAVVAGFAAFLGKYLEQQFNLTTSSANQLLGMTAIPCACLGIFLGGLLVKKLSLSALG 419
Query: 542 XIRMAMLVNLVSTACYVSFLFLGCDTGPVAGVTVPYGNTSAPGSTLDPYSPCNKNCECQT 721
IRMAMLVNLVSTACYVSFLFLGCDTGPVAGVTV YGN SA GS LDPYSPCN NCECQT
Sbjct: 420 AIRMAMLVNLVSTACYVSFLFLGCDTGPVAGVTVRYGNNSARGSALDPYSPCNNNCECQT 479
Query: 722 DSFTPVCGADGITYLSACFAGCNSTNLTGCACLTTVPPENATVVPGKCPSPGCQEAFLTF 901
DSFTPVCGADGITYLSACFAGCNSTNLTGCACLTTVPPENA+VVPGKCPSPGCQEAFLTF
Sbjct: 480 DSFTPVCGADGITYLSACFAGCNSTNLTGCACLTTVPPENASVVPGKCPSPGCQEAFLTF 539
Query: 902 LCVMCVCSMIGAMAQTPSVIILIRTVSPELKSYAXXXXXXXXXXXXXXXXXXXXXAGIDS 1081
LCVMCVCS+IGAMAQTPSVIILIRTVSPELKSYA AGIDS
Sbjct: 540 LCVMCVCSLIGAMAQTPSVIILIRTVSPELKSYALGVLFLLLRLLGFIPPPLIFGAGIDS 599
Query: 1082 TCLFWSTFCGEQGACVLYDNVAYRYLYVSIAIALKSFAFILYTTTWQCLRKNYKRYIKNH 1261
TCLFWSTFCGEQGACVLYDNV YRYLYVSIAIALKSFAFILYTTTWQCLRKNYKRYIKNH
Sbjct: 600 TCLFWSTFCGEQGACVLYDNVVYRYLYVSIAIALKSFAFILYTTTWQCLRKNYKRYIKNH 659
Query: 1262 EGGLSTSEFFASTLTLDNLGRDPVPANQTHRTKFIYNLEDHEWCENMESVL 1414
EGGLSTSEFFASTLTLDNLGRDPVPA+QTHRTKFIYNLEDHEWCENMESVL
Sbjct: 660 EGGLSTSEFFASTLTLDNLGRDPVPAHQTHRTKFIYNLEDHEWCENMESVL 710
>ref|NP_001033732.1| solute carrier organic anion transporter family member 3A1 isoform 2
[Mus musculus].
Length = 692
Score = 717 bits (1850), Expect = 0.0
Identities = 354/427 (82%), Positives = 359/427 (84%)
Frame = +2
Query: 2 YVDAVFIDTSNLDITPDDPRWIXXXXXXXXXXXXXXXXXXXXXXXXPQSLPPHSDPALES 181
YVDAVFIDTSNLDITPDDPRWI PQSLPPHSDP +ES
Sbjct: 240 YVDAVFIDTSNLDITPDDPRWIGAWWGGFLLCGALLFFSSLLMFGFPQSLPPHSDPGMES 299
Query: 182 EQAMLPEREYERPKPSNGVLRHPLEPDTSASCFQQLRVIPKVTKHLLSNPVFTCIILAAC 361
EQAMLPEREYERPKPSNGVLRHPLEPD+SASCFQQLRVIPKVTKHLLSNPVFTCI+LAAC
Sbjct: 300 EQAMLPEREYERPKPSNGVLRHPLEPDSSASCFQQLRVIPKVTKHLLSNPVFTCIVLAAC 359
Query: 362 MEIAVVAGFAAFLGKYLEQQFNLTTSSANQLLGMTAIPCACLGIFXXXXXXXXXXXXXXX 541
MEIAVVAGFAAFLGKYLEQQFNLTTSSANQLLGMTAIPCACLGIF
Sbjct: 360 MEIAVVAGFAAFLGKYLEQQFNLTTSSANQLLGMTAIPCACLGIFLGGLLVKKLSLSALG 419
Query: 542 XIRMAMLVNLVSTACYVSFLFLGCDTGPVAGVTVPYGNTSAPGSTLDPYSPCNKNCECQT 721
IRMAMLVNLVSTACYVSFLFLGCDTGPVAGVTV YGN SA GS LDPYSPCN NCECQT
Sbjct: 420 AIRMAMLVNLVSTACYVSFLFLGCDTGPVAGVTVRYGNNSARGSALDPYSPCNNNCECQT 479
Query: 722 DSFTPVCGADGITYLSACFAGCNSTNLTGCACLTTVPPENATVVPGKCPSPGCQEAFLTF 901
DSFTPVCGADGITYLSACFAGCNSTNLTGCACLTTVPPENA+VVPGKCPSPGCQEAFLTF
Sbjct: 480 DSFTPVCGADGITYLSACFAGCNSTNLTGCACLTTVPPENASVVPGKCPSPGCQEAFLTF 539
Query: 902 LCVMCVCSMIGAMAQTPSVIILIRTVSPELKSYAXXXXXXXXXXXXXXXXXXXXXAGIDS 1081
LCVMCVCS+IGAMAQTPSVIILIRTVSPELKSYA AGIDS
Sbjct: 540 LCVMCVCSLIGAMAQTPSVIILIRTVSPELKSYALGVLFLLLRLLGFIPPPLIFGAGIDS 599
Query: 1082 TCLFWSTFCGEQGACVLYDNVAYRYLYVSIAIALKSFAFILYTTTWQCLRKNYKRYIKNH 1261
TCLFWSTFCGEQGACVLYDNV YRYLYVSIAIALKSFAFILYTTTWQCLRKNYKRYIKNH
Sbjct: 600 TCLFWSTFCGEQGACVLYDNVVYRYLYVSIAIALKSFAFILYTTTWQCLRKNYKRYIKNH 659
Query: 1262 EGGLSTS 1282
EGGLSTS
Sbjct: 660 EGGLSTS 666
>ref|NP_067446.1| solute carrier organic anion transporter family member 1C1 isoform 1
[Mus musculus].
Length = 715
Score = 181 bits (459), Expect = 2e-45
Identities = 118/442 (26%), Positives = 199/442 (45%), Gaps = 14/442 (3%)
Frame = +2
Query: 2 YVDAVFIDTSNLDITPDDPRWIXXXXXXXXXXXXXXXXXXXXXXXXPQSLPPHSDPALES 181
YVD F++ ++ ITP DP+W+ P++LP S
Sbjct: 253 YVDIGFVNLDHITITPKDPQWVGAWWLGYLIAGFLSLLAAVPFWCLPKTLP-------RS 305
Query: 182 EQAMLPEREYERPKPSNGVLRHPLEP-DTSASCFQQLRVIPKVTKHLLSNPVFTCIILAA 358
+ E+ K + + + + P D + + K L NPV+ + A+
Sbjct: 306 QSRENSGSTSEKSKFIDDPIHYQMAPGDDKMKIMEMAKDFLPSLKTLFRNPVYILYLCAS 365
Query: 359 CMEIAVVAGFAAFLGKYLEQQFNLTTSSANQLLGMTAIPCACLGIFXXXXXXXXXXXXXX 538
++ + G + KY+EQQ+ ++S AN ++G+ IP LGIF
Sbjct: 366 TVQFNSLFGMVTYKPKYIEQQYGQSSSKANFVIGLINIPAVALGIFSGGIVMKKFRLGIC 425
Query: 539 XXIRMAMLVNLVSTACYVSFLFLGCDTGPVAGVTVPYGNTSAPGSTLDP--YSPCNKNCE 712
++ + ++ ++S LGC+ VAG+TV Y T P S + +S CN C+
Sbjct: 426 EATKLYLGSSVFGYLLFLSLFALGCENSSVAGLTVSYQGTK-PVSYHERALFSDCNSRCK 484
Query: 713 CQTDSFTPVCGADGITYLSACFAGCNSTNLTG-------CACLTTVPPE--NATVVPGKC 865
C + P+CG +GITY+SAC AGC S++ +G C C+ P+ N + + G+C
Sbjct: 485 CSDSKWEPMCGDNGITYVSACLAGCQSSSRSGKNIIFSNCTCVGFAAPKSGNWSGMMGRC 544
Query: 866 PSP-GCQEAFLTFLCVMCVCSMIGAMAQTPSVIILIRTVSPELKSYAXXXXXXXXXXXXX 1042
GC + FL FL + + S ++ P I+L+R + P+LKS+A
Sbjct: 545 QKDNGCSQMFLYFLVISVITSYTLSLGGIPGYILLLRCIQPQLKSFALGIYTLAVRVLAG 604
Query: 1043 XXXXXXXXAGIDSTCLFWS-TFCGEQGACVLYDNVAYRYLYVSIAIALKSFAFILYTTTW 1219
ID++CL W CG +G+C LYD+ A+R++Y+ + L + + L
Sbjct: 605 IPAPVYFGVLIDTSCLKWGFKKCGSRGSCRLYDSHAFRHIYLGLTTLLGTVSVFLSMAVL 664
Query: 1220 QCLRKNYKRYIKNHEGGLSTSE 1285
L+ K+Y+ H ++T E
Sbjct: 665 FVLK---KKYVSKHSSLITTRE 683
>ref|NP_001171243.1| solute carrier organic anion transporter family member 1C1 isoform 2
[Mus musculus].
Length = 714
Score = 177 bits (450), Expect = 2e-44
Identities = 118/442 (26%), Positives = 199/442 (45%), Gaps = 14/442 (3%)
Frame = +2
Query: 2 YVDAVFIDTSNLDITPDDPRWIXXXXXXXXXXXXXXXXXXXXXXXXPQSLPPHSDPALES 181
YVD F++ ++ ITP DP+W+ P++LP S
Sbjct: 253 YVDIGFVNLDHITITPKDPQWVGAWWLGYLIAGFLSLLAAVPFWCLPKTLP-------RS 305
Query: 182 EQAMLPEREYERPKPSNGVLRHPLEP-DTSASCFQQLRVIPKVTKHLLSNPVFTCIILAA 358
+ E+ K + + + + P D + + K L NPV+ + A+
Sbjct: 306 QSRENSGSTSEKSKFIDDPIHYQMAPGDDKMKIMEMAKDFLPSLKTLFRNPVYILYLCAS 365
Query: 359 CMEIAVVAGFAAFLGKYLEQQFNLTTSSANQLLGMTAIPCACLGIFXXXXXXXXXXXXXX 538
++ + G + KY+EQQ+ ++S AN ++G+ IP LGIF
Sbjct: 366 TVQFNSLFGMVTYKPKYIEQQYGQSSSKANFVIGLINIPAVALGIFSGGIVMKKFRLGIC 425
Query: 539 XXIRMAMLVNLVSTACYVSFLFLGCDTGPVAGVTVPYGNTSAPGSTLDP--YSPCNKNCE 712
++ + ++ ++S LGC+ VAG+TV Y T P S + +S CN C+
Sbjct: 426 EATKLYLGSSVFGYLLFLSLFALGCENSSVAGLTVSYQGTK-PVSYHERALFSDCNSRCK 484
Query: 713 CQTDSFTPVCGADGITYLSACFAGCNSTNLTG-------CACLTTVPPE--NATVVPGKC 865
C + P+CG +GITY+SAC AGC S++ +G C C+ P+ N + + G+C
Sbjct: 485 CSDSKWEPMCGDNGITYVSACLAGCQSSSRSGKNIIFSNCTCVGFAAPKSGNWSGMMGRC 544
Query: 866 PSP-GCQEAFLTFLCVMCVCSMIGAMAQTPSVIILIRTVSPELKSYAXXXXXXXXXXXXX 1042
GC + FL FL + + S ++ P I+L+R + P+LKS+A
Sbjct: 545 QKDNGCSQMFLYFLVISVITSYTLSLGGIPGYILLLRCIQPQLKSFALGIYTLAVRVLGI 604
Query: 1043 XXXXXXXXAGIDSTCLFWS-TFCGEQGACVLYDNVAYRYLYVSIAIALKSFAFILYTTTW 1219
ID++CL W CG +G+C LYD+ A+R++Y+ + L + + L
Sbjct: 605 PAPVYFGVL-IDTSCLKWGFKKCGSRGSCRLYDSHAFRHIYLGLTTLLGTVSVFLSMAVL 663
Query: 1220 QCLRKNYKRYIKNHEGGLSTSE 1285
L+ K+Y+ H ++T E
Sbjct: 664 FVLK---KKYVSKHSSLITTRE 682
>ref|NP_201571.2| solute carrier organic anion transporter family member 2A1 [Mus
musculus].
Length = 643
Score = 174 bits (441), Expect = 2e-43
Identities = 114/437 (26%), Positives = 201/437 (45%), Gaps = 13/437 (2%)
Frame = +2
Query: 2 YVDAVFIDTSNLDITPDDPRWIXXXXXXXXXXXXXXXXXXXXXXXXPQSLPPHSDPALES 181
+VD +DT+ ++++P DPRWI P+++ ++ ++ +
Sbjct: 233 FVDYGRVDTATVNLSPGDPRWIGAWWLGLLISSGFLIVTSLPFFFFPRAMSRGAERSVIA 292
Query: 182 EQAMLPEREYERPKPSNGVLRHPLEPDTSASCFQQLRVIPKVTKHLLSNPVFTCIILAAC 361
E+ M E + R S ++ P++ LL NP+F ++L+ C
Sbjct: 293 EETMKMEEDKSR-----------------GSLMDFIKRFPRIFLRLLMNPLFMLVVLSQC 335
Query: 362 MEIAVVAGFAAFLGKYLEQQFNLTTSSANQLLGMTAIPCACLGIFXXXXXXXXXXXXXXX 541
+V+AG + FL K+LE+Q++ + + AN L+G +P A LG+
Sbjct: 336 TFSSVIAGLSTFLNKFLEKQYDASAAYANLLIGAVNLPAAALGMLFGGILMKRFVFPLQT 395
Query: 542 XIRMAMLVNLVSTACYVSFLFLGCDTGPVAGVTVPYGNTSAPGSTLDPYSP-CNKNCECQ 718
R+A + +S F+GC T VA V P S P S++ P P C ++C C
Sbjct: 396 IPRVAATIMTISIILCAPLFFMGCSTPAVAEVYPP----STP-SSIHPQPPACRRDCLCP 450
Query: 719 TDSFTPVCGADGITYLSACFAGCNSTNLT----------GCACLTTVPPENATVVPGKCP 868
F PVCG +G+ YLS C AGC+S N++ C+C+T +A+ G CP
Sbjct: 451 DSVFHPVCGDNGVEYLSPCHAGCSSLNVSSAASKQPIYLNCSCVT---GGSASAKTGSCP 507
Query: 869 SPGCQEAFLTFLCVMCVCSMIGAMAQTPSVIILIRTVSPELKSYAXXXXXXXXXXXXXXX 1048
+ C + L + ++ ++I ++ P ++++R V+ + KS+A
Sbjct: 508 T-SCAQLLLPSIFLISFVALIACVSHNPLYMMVLRVVNQDEKSFAIGVQFLLMRLLAWLP 566
Query: 1049 XXXXXXAGIDSTCLFWSTFC-GEQGACVLYDNVAYRYLYVSIAIALKSF-AFILYTTTWQ 1222
IDS+C+ W+ C G +GAC YDN A R Y+ + + K +L+ +W+
Sbjct: 567 SPSLYGLLIDSSCIRWNYLCSGRRGACAYYDNDALRNRYLGLQVIYKVLGTLLLFFISWR 626
Query: 1223 CLRKNYKRYIKNHEGGL 1273
++KN + ++ + GL
Sbjct: 627 -VKKNREYSLQENASGL 642
>ref|NP_065241.1| solute carrier organic anion transporter family member 1B2 isoform 1
[Mus musculus].
Length = 689
Score = 172 bits (436), Expect = 8e-43
Identities = 115/429 (26%), Positives = 184/429 (42%), Gaps = 14/429 (3%)
Frame = +2
Query: 2 YVDAVFIDTSNLDITPDDPRWIXXXXXXXXXXXXXXXXXXXXXXXXPQSLPPHSDPALES 181
YVD ++D ++ ITP D RW+ P+ +P S ++
Sbjct: 229 YVDVGYVDLRSVRITPQDARWVGAWWLGFIVNGLLCIICSIPFFFLPK-IPKRSQKERKN 287
Query: 182 EQAMLPEREYERPKP-SNGVLRHPLEPDTSASCFQQLRVIPKVTKHLLSNPVFTCIILAA 358
++ + E P +N + P LR I L+N + ++
Sbjct: 288 SASLHVLKTDEDKNPVTNPTTQEKQAPANLTGFLWSLRSI-------LTNEQYVIFLILT 340
Query: 359 CMEIAVVAGFAAFLGKYLEQQFNLTTSSANQLLGMTAIPCACLGIFXXXXXXXXXXXXXX 538
++I+ G +L K++EQQF T S AN LLG+ IP G+F
Sbjct: 341 LLQISSFIGSFTYLFKFIEQQFGQTASQANFLLGVITIPTMASGMFLGGYLIKRLKLTLL 400
Query: 539 XXIRMAMLVNLVSTACYVSFLFLGCDTGPVAGVTVPYGNTSAPGSTLD-PYSPCNKNCEC 715
+ ++ Y+S+ L C+ AG+T+ Y + S +D P S CN +C C
Sbjct: 401 GITKFVFFTTTMAYVFYLSYFLLICENKAFAGLTLTYDGMNPVDSHIDVPLSYCNSDCIC 460
Query: 716 QTDSFTPVCGADGITYLSACFAGCNS---------TNLTGCACL--TTVPPENATVVPGK 862
+ + PVCG +G+TY+S C AGC S C+C+ + N + G+
Sbjct: 461 DKNQWEPVCGENGVTYISPCLAGCKSFRGDKKLMNIEFYDCSCVSGSGFQKGNHSARLGE 520
Query: 863 CPSPGCQEAFLTFLCVMCVCSMIGAMAQTPSVIILIRTVSPELKSYAXXXXXXXXXXXXX 1042
CP C+ + ++ + S A+ T ++ILIR+V PELKS
Sbjct: 521 CPRDKCKTKYYFYITFQVIISFFTALGSTSLMLILIRSVQPELKSLGMGFHSLVVRTLGG 580
Query: 1043 XXXXXXXXAGIDSTCLFWS-TFCGEQGACVLYDNVAYRYLYVSIAIALKSFAFILYTTTW 1219
A ID TC+ WS T CG +GAC LY++ + +YV ++IALK+ +LY
Sbjct: 581 ILAPVYYGALIDRTCMKWSVTSCGARGACRLYNSRLFGMIYVGLSIALKTPILLLYVALI 640
Query: 1220 QCLRKNYKR 1246
+++ KR
Sbjct: 641 YVMKRKMKR 649
>ref|NP_766429.2| solute carrier organic anion transporter family, member 5A1 [Mus
musculus].
Length = 850
Score = 165 bits (417), Expect = 1e-40
Identities = 114/440 (25%), Positives = 188/440 (42%), Gaps = 35/440 (7%)
Frame = +2
Query: 17 FIDTSN-LDITPDDPRWIXXXXXXXXXXXXXXXXXXXXXXXXPQSLPP-HSDPALESEQA 190
++D N + + DPR+I P+ LPP H S
Sbjct: 330 YVDPRNPVHLDQSDPRFIGNWWSGFLLCAIAMFLVIFPMFTFPKKLPPRHKKKKKFSADV 389
Query: 191 MLPEREYERPKPSNGVLRHPLEPDTSASCFQQLRVIPKVTKHLLSNPVFTCIILAACMEI 370
++ + + ++ + + P + +R +P+ +LSN F + L+ E
Sbjct: 390 VIDDDIIKEKSNTSEQMNKKVSP---MGFGKNVRDLPRAAVRILSNMTFLFVSLSYTAES 446
Query: 371 AVVAGFAAFLGKYLEQQFNLTTSSANQLLGMTAIPCACLGIFXXXXXXXXXXXXXXXXIR 550
A+V F F+ K++E QF + S+A+ G+ +P A +GI +
Sbjct: 447 AIVTAFITFIPKFIESQFGIPASNASIYTGVIIVPSAGVGIVLGGYIIKKLKLGARESAK 506
Query: 551 MAMLVNLVSTACYVSFLFLGCDTGPVAGVTVPYGNTSAPGSTLDPYS---PCNKNCECQT 721
+AM+ + VS C+ + +GC++ + G+ +PY T+ P T+ + CN NC C+
Sbjct: 507 LAMICSGVSLLCFSTLFIVGCESINLGGINIPY--TTGPSLTMPHRNLTGSCNVNCGCKI 564
Query: 722 DSFTPVCGADGITYLSACFAGC-NSTNL-------TGCACLTT----VPP---------- 835
+ PVCG+DGITY + C AGC NS NL T C C+ + PP
Sbjct: 565 HEYEPVCGSDGITYFNPCLAGCINSGNLTTGVRNYTECTCVQSRQVITPPTVGQRSQLRV 624
Query: 836 --------ENATVVPGKCPSPGCQEAFLTFLCVMCVCSMIGAMAQTPSVIILIRTVSPEL 991
EN V GKC C + FL + + + I A AQ ++I+ +R+V E
Sbjct: 625 VIVKTYLNENGYAVSGKCKRT-C-NTLIPFLVFLFIVTFITACAQPSAIIVTLRSVEDEE 682
Query: 992 KSYAXXXXXXXXXXXXXXXXXXXXXAGIDSTCLFWSTFCGEQGACVLYDNVAYRYLYVSI 1171
+ +A A ID+TC+ W CG QG+C Y+ ++R++Y +
Sbjct: 683 RPFALGMQFVLLRTLAYIPTPIYFGAVIDTTCMLWQQECGVQGSCWEYNVTSFRFVYFGL 742
Query: 1172 AIALKSFAFILYTTTWQCLR 1231
A LK FI W ++
Sbjct: 743 AAGLKFVGFIFIFLAWYSIK 762
>ref|NP_780525.1| solute carrier organic anion transporter family member 2B1 [Mus
musculus].
Length = 683
Score = 162 bits (411), Expect = 6e-40
Identities = 112/434 (25%), Positives = 185/434 (42%), Gaps = 23/434 (5%)
Frame = +2
Query: 2 YVDAVFIDTSNLDITPDDPRWIXXXXXXXXXXXXXXXXXXXXXXXXPQSLPPH------- 160
YVD + +++TP DPRW+ P+ +P
Sbjct: 244 YVDIDRMPEGGINLTPKDPRWVGAWWLGFLISSGLVVLASSPYFFFPREMPKEKHEFHFR 303
Query: 161 ----SDPALESEQAMLPEREYERPKPSNGVLRHPLEPDTSASCFQQLRVIPKVTKHLLSN 328
+ A + + ++E K G+ + + PD + F ++V P+V L +
Sbjct: 304 RKVLASAASTASKGEDLSSQHEPLKKQAGLAQ--IAPDLTLVQF--VKVFPRVLLRNLRH 359
Query: 329 PVFTCIILAACMEIAVVAGFAAFLGKYLEQQFNLTTSSANQLLGMTAIPCACLGIFXXXX 508
P+F ++L+ ++VAG A FL K+LE+QF++T S AN LLG IP +GI
Sbjct: 360 PIFLLVVLSQVCTSSMVAGMATFLPKFLERQFSITASFANMLLGCLTIPLVIVGIMMGGV 419
Query: 509 XXXXXXXXXXXXIRMAMLVNLVSTACYVSFLFLGCDTGPVAGVTVPYGNTSAPGSTLDPY 688
+ +L +L+ V F+GC T +AG+T G + PG +L P
Sbjct: 420 LVKRLHLSPVQCSALCLLGSLLCLLFSVPLFFIGCSTHQIAGITQDLG--AQPGPSLFP- 476
Query: 689 SPCNKNCECQTDSFTPVCGADG-ITYLSACFAGC-----------NSTNLTGCACLTTVP 832
C++ C CQ+D F PVC + Y + C AGC + T C+C+
Sbjct: 477 -GCSEPCSCQSDDFNPVCDTSAYVEYTTPCHAGCTGRVVQEALGKSQVFYTNCSCVA--- 532
Query: 833 PENATVVPGKCPSPGCQEAFLTFLCVMCVCSMIGAMAQTPSVIILIRTVSPELKSYAXXX 1012
N TV G C S C L F+ + + + + ++ TPS ++++R V E K+ A
Sbjct: 533 -GNGTVPAGSCES-ACSRLVLPFIVLFSLGAGLASITHTPSFMLILRGVKKEDKTLAVGM 590
Query: 1013 XXXXXXXXXXXXXXXXXXAGIDSTCLFWSTFCGEQGACVLYDNVAYRYLYVSIAIALKSF 1192
+ ID+TC+ W+ CG + C YD+ R ++ + KS
Sbjct: 591 QFMLLRVLAWMPSPVIHGSAIDTTCVHWALTCGRRAVCRYYDHDLLRNRFIGLQFFFKSG 650
Query: 1193 AFILYTTTWQCLRK 1234
+ + +T LR+
Sbjct: 651 SLVCFTLVLAILRQ 664
>ref|NP_038825.1| solute carrier organic anion transporter family member 1A1 [Mus
musculus].
Length = 670
Score = 160 bits (406), Expect = 2e-39
Identities = 115/411 (27%), Positives = 172/411 (41%), Gaps = 11/411 (2%)
Frame = +2
Query: 2 YVDAVFIDTSNLDITPDDPRWIXXXXXXXXXXXXXXXXXXXXXXXXPQSLPPHS-DPALE 178
YVD ++T +L ITP D RW+ P++LP ++
Sbjct: 221 YVDIGSVNTDDLTITPTDTRWVGAWWIGFLVCAGVNILTSIPFFFFPKTLPKKELQDNVD 280
Query: 179 SEQAMLPEREYERPKPSNGVLRHPLEPDTSASCFQQLRVIPKVTKHLLSNPVFTCIILAA 358
+ E+ ER K N + P K L NP++ L +
Sbjct: 281 VTKYEKVEKHRERAKKENLGITKDFLP---------------FMKSLCCNPIYMLFSLTS 325
Query: 359 CMEIAVVAGFAAFLGKYLEQQFNLTTSSANQLLGMTAIPCACLGIFXXXXXXXXXXXXXX 538
++I A FL KYLEQQ+ +TS A L+G+ ++P CLG
Sbjct: 326 VLQINGFASTFTFLPKYLEQQYGKSTSEAVFLIGVYSLPPVCLGYLISGFIMKKFKITVK 385
Query: 539 XXIRMAMLVNLVSTACYVSFLFLGCDTGPVAGVTVPYGNTSAP-GSTLDPYSPCNKNCEC 715
+A ++L ++ L CD PVAG+T Y P + + CN C C
Sbjct: 386 KAAYIAFGLSLSEYFIFLCNYLLTCDNFPVAGLTTSYKGVQHPLYGEKNVLADCNTRCSC 445
Query: 716 QTDSFTPVCGADGITYLSACFAGCNSTNLTG-------CACLTTVPPENATVVPGKC-PS 871
TD++ PVCG +G+ Y+SAC AGC + TG C+C+ + N++ V G C
Sbjct: 446 LTDTWDPVCGDNGLAYMSACLAGCEKSVGTGTNMVFQNCSCIGS--SGNSSAVLGLCKKG 503
Query: 872 PGCQEAFLTFLCVMCVCSMIGAMAQTPSVIILIRTVSPELKSYAXXXXXXXXXXXXXXXX 1051
P C FL S I ++A P ++L+R V E KS
Sbjct: 504 PECDNKLQYFLIKSVFSSFIFSLAAIPGYMVLLRCVKSEEKSIGVGLHAFFIRLLAGIPA 563
Query: 1052 XXXXXAGIDSTCLFWSTF-CGEQGACVLYDNVAYRYLYVSIAIALKSFAFI 1201
A ID TCL W T CG+ GAC +YD +R++Y+ + A++ +F+
Sbjct: 564 PVYFGALIDRTCLHWGTLKCGQPGACRMYDINRFRHIYLGLPAAVRGSSFL 614
>ref|NP_766246.1| solute carrier organic anion transporter family member 4C1 [Mus
musculus].
Length = 722
Score = 155 bits (392), Expect = 1e-37
Identities = 113/408 (27%), Positives = 173/408 (42%), Gaps = 13/408 (3%)
Frame = +2
Query: 2 YVDAVFIDTSNLDITPDDPRWIXXXXXXXXXXXXXXXXXXXXXXXXPQSLPPHSDPALES 181
Y+D +S D+T DDPRW+ P+ LP
Sbjct: 287 YIDIAMGQSS--DLTEDDPRWLGAWWIGFLLAWLFAWSLIMPFSCFPKHLP-----GTAK 339
Query: 182 EQAMLPEREYERPKPSNGVLRHPLEPDTSASCFQQLRVIPKVTKHLLSNPVFTCIILAAC 361
QA + ++ S +H T + + ++ P K+L+ N VF C++L+
Sbjct: 340 IQAGKTSQTHQNNSTS---FQH-----TDENFGKSIKDFPTAVKNLMRNTVFICLVLSTT 391
Query: 362 MEIAVVAGFAAFLGKYLEQQFNLTTSSANQLLGMTAIPCACLGIFXXXXXXXXXXXXXXX 541
E + GFA FL K++E QF LT+S A L G IP A LG
Sbjct: 392 SEALITTGFATFLPKFIENQFGLTSSFAATLGGAVLIPGAALGQILGGVLVSKFKMKCKN 451
Query: 542 XIRMAMLVNLVSTACYVSFLFLGCDTGPVAGVTVPYGNTSAPGSTLDPYSPCNKNCECQT 721
++ A+ + V+ F++ C+ P AGV+ Y T G+ +PCN NC C
Sbjct: 452 TMKFALCTSGVALVLSFVFIYAKCENEPFAGVSESYNGTGEMGNLT---APCNANCNCLR 508
Query: 722 DSFTPVCGADGITYLSACFAGC-NSTN------LTGCACL-----TTVPPENATVVPGKC 865
+ P+CG+DGI Y S CFAGC NS + C+C+ +T + GKC
Sbjct: 509 SYYYPLCGSDGIQYFSPCFAGCLNSVSNRKPKVYYNCSCIERKITSTAESTDFEAKAGKC 568
Query: 866 PSPGCQEAFLTFLCVMCVCSMIGAMAQTPSVIILIRTVSPELKSYAXXXXXXXXXXXXXX 1045
+ C + FL + + + MA TP + ++R V+ +S A
Sbjct: 569 RT-RCSNLPI-FLGIFFITVIFTFMAGTPITVSILRCVNHRHRSLALGVQFMLLRLLGTI 626
Query: 1046 XXXXXXXAGIDSTCLFWS-TFCGEQGACVLYDNVAYRYLYVSIAIALK 1186
IDSTC+ W CG +GAC +YDN+ ++ V+I++ K
Sbjct: 627 PGPIIFGVIIDSTCVLWDVNECGIKGACWIYDNIKMAHMLVAISVTCK 674
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 58,528,857
Number of extensions: 1561506
Number of successful extensions: 6974
Number of sequences better than 1.0e-05: 25
Number of HSP's gapped: 6775
Number of HSP's successfully gapped: 25
Length of query: 603
Length of database: 15,617,559
Length adjustment: 107
Effective length of query: 496
Effective length of database: 12,403,707
Effective search space: 6152238672
Effective search space used: 6152238672
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-003789
(1811 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_003356778.1| PREDICTED: solute carrier organic anion tran... 812 0.0
Alignment gi|XP_001924382.2| PREDICTED: solute carrier organic anion tran... 793 0.0
Alignment gi|XP_003126493.2| PREDICTED: LOW QUALITY PROTEIN: solute carri... 178 1e-44
Alignment gi|NP_001116667.2| solute carrier organic anion transporter fam... 173 3e-43
Alignment gi|XP_003354276.1| PREDICTED: solute carrier organic anion tran... 165 7e-41
Alignment gi|XP_001925055.2| PREDICTED: LOW QUALITY PROTEIN: solute carri... 160 2e-39
Alignment gi|XP_003129708.2| PREDICTED: solute carrier organic anion tran... 155 9e-38
Alignment gi|XP_003355596.1| PREDICTED: solute carrier organic anion tran... 150 2e-36
Alignment gi|XP_003357247.1| PREDICTED: solute carrier organic anion tran... 141 1e-33
>ref|XP_003356778.1| PREDICTED: solute carrier organic anion transporter family member 3A1
isoform 2 [Sus scrofa].
Length = 481
Score = 812 bits (2097), Expect = 0.0
Identities = 401/467 (85%), Positives = 402/467 (86%)
Frame = +2
Query: 14 VFIDTSNLDITPDDPRWIXXXXXXXXXXXXXXXXXXXXXXXXPQSLPPHSDPALESEQAM 193
+F NLDITPDDPRWI PQSLPPHSDPALESEQAM
Sbjct: 15 LFPIAGNLDITPDDPRWIGAWWGGFLLCGALLFFSSLLMFGFPQSLPPHSDPALESEQAM 74
Query: 194 LPEREYERPKPSNGVLRHPLEPDTSASCFQQLRVIPKVTKHLLSNPVFTCIILAACMEIA 373
LPEREYERPKPSNGVLRHPLEPDTSASCFQQLRVIPKVTKHLLSNPVFTCIILAACMEIA
Sbjct: 75 LPEREYERPKPSNGVLRHPLEPDTSASCFQQLRVIPKVTKHLLSNPVFTCIILAACMEIA 134
Query: 374 VVAGFAAFLGKYLEQQFNLTTSSANQLLGMTAIPCACLGIFXXXXXXXXXXXXXXXXIRM 553
VVAGFAAFLGKYLEQQFNLTTSSANQLLGMTAIPCACLGIF IRM
Sbjct: 135 VVAGFAAFLGKYLEQQFNLTTSSANQLLGMTAIPCACLGIFLGGLLVKKLSLSALGAIRM 194
Query: 554 AMLVNLVSTACYVSFLFLGCDTGPVAGVTVPYGNTSAPGSTLDPYSPCNKNCECQTDSFT 733
AMLVNLVSTACYVSFLFLGCDTGPVAGVTVPYGNTSAPGSTLDPYSPCNKNCECQTDSFT
Sbjct: 195 AMLVNLVSTACYVSFLFLGCDTGPVAGVTVPYGNTSAPGSTLDPYSPCNKNCECQTDSFT 254
Query: 734 PVCGADGITYLSACFAGCNSTNLTGCACLTTVPPENATVVPGKCPSPGCQEAFLTFLCVM 913
PVCGADGITYLSACFAGCNSTNLTGCACLTTVPPENATVVPGKCPSPGCQEAFLTFLCVM
Sbjct: 255 PVCGADGITYLSACFAGCNSTNLTGCACLTTVPPENATVVPGKCPSPGCQEAFLTFLCVM 314
Query: 914 CVCSMIGAMAQTPSVIILIRTVSPELKSYAXXXXXXXXXXXXXXXXXXXXXAGIDSTCLF 1093
CVCSMIGAMAQTPSVIILIRTVSPELKSYA AGIDSTCLF
Sbjct: 315 CVCSMIGAMAQTPSVIILIRTVSPELKSYALGVLFLLLRLLGFIPPPLIFGAGIDSTCLF 374
Query: 1094 WSTFCGEQGACVLYDNVAYRYLYVSIAIALKSFAFILYTTTWQCLRKNYKRYIKNHEGGL 1273
WSTFCGEQGACVLYDNVAYRYLYVSIAIALKSFAFILYTTTWQCLRKNYKRYIKNHEGGL
Sbjct: 375 WSTFCGEQGACVLYDNVAYRYLYVSIAIALKSFAFILYTTTWQCLRKNYKRYIKNHEGGL 434
Query: 1274 STSEFFASTLTLDNLGRDPVPANQTHRTKFIYNLEDHEWCENMESVL 1414
STSEFFASTLTLDNLGRDPVPANQTHRTKFIYNLEDHEWCENMESVL
Sbjct: 435 STSEFFASTLTLDNLGRDPVPANQTHRTKFIYNLEDHEWCENMESVL 481
>ref|XP_001924382.2| PREDICTED: solute carrier organic anion transporter family member 3A1
isoform 1 [Sus scrofa].
Length = 429
Score = 793 bits (2049), Expect = 0.0
Identities = 388/425 (91%), Positives = 388/425 (91%)
Frame = +2
Query: 140 PQSLPPHSDPALESEQAMLPEREYERPKPSNGVLRHPLEPDTSASCFQQLRVIPKVTKHL 319
PQSLPPHSDPALESEQAMLPEREYERPKPSNGVLRHPLEPDTSASCFQQLRVIPKVTKHL
Sbjct: 5 PQSLPPHSDPALESEQAMLPEREYERPKPSNGVLRHPLEPDTSASCFQQLRVIPKVTKHL 64
Query: 320 LSNPVFTCIILAACMEIAVVAGFAAFLGKYLEQQFNLTTSSANQLLGMTAIPCACLGIFX 499
LSNPVFTCIILAACMEIAVVAGFAAFLGKYLEQQFNLTTSSANQLLGMTAIPCACLGIF
Sbjct: 65 LSNPVFTCIILAACMEIAVVAGFAAFLGKYLEQQFNLTTSSANQLLGMTAIPCACLGIFL 124
Query: 500 XXXXXXXXXXXXXXXIRMAMLVNLVSTACYVSFLFLGCDTGPVAGVTVPYGNTSAPGSTL 679
IRMAMLVNLVSTACYVSFLFLGCDTGPVAGVTVPYGNTSAPGSTL
Sbjct: 125 GGLLVKKLSLSALGAIRMAMLVNLVSTACYVSFLFLGCDTGPVAGVTVPYGNTSAPGSTL 184
Query: 680 DPYSPCNKNCECQTDSFTPVCGADGITYLSACFAGCNSTNLTGCACLTTVPPENATVVPG 859
DPYSPCNKNCECQTDSFTPVCGADGITYLSACFAGCNSTNLTGCACLTTVPPENATVVPG
Sbjct: 185 DPYSPCNKNCECQTDSFTPVCGADGITYLSACFAGCNSTNLTGCACLTTVPPENATVVPG 244
Query: 860 KCPSPGCQEAFLTFLCVMCVCSMIGAMAQTPSVIILIRTVSPELKSYAXXXXXXXXXXXX 1039
KCPSPGCQEAFLTFLCVMCVCSMIGAMAQTPSVIILIRTVSPELKSYA
Sbjct: 245 KCPSPGCQEAFLTFLCVMCVCSMIGAMAQTPSVIILIRTVSPELKSYALGVLFLLLRLLG 304
Query: 1040 XXXXXXXXXAGIDSTCLFWSTFCGEQGACVLYDNVAYRYLYVSIAIALKSFAFILYTTTW 1219
AGIDSTCLFWSTFCGEQGACVLYDNVAYRYLYVSIAIALKSFAFILYTTTW
Sbjct: 305 FIPPPLIFGAGIDSTCLFWSTFCGEQGACVLYDNVAYRYLYVSIAIALKSFAFILYTTTW 364
Query: 1220 QCLRKNYKRYIKNHEGGLSTSEFFASTLTLDNLGRDPVPANQTHRTKFIYNLEDHEWCEN 1399
QCLRKNYKRYIKNHEGGLSTSEFFASTLTLDNLGRDPVPANQTHRTKFIYNLEDHEWCEN
Sbjct: 365 QCLRKNYKRYIKNHEGGLSTSEFFASTLTLDNLGRDPVPANQTHRTKFIYNLEDHEWCEN 424
Query: 1400 MESVL 1414
MESVL
Sbjct: 425 MESVL 429
>ref|XP_003126493.2| PREDICTED: LOW QUALITY PROTEIN: solute carrier organic anion
transporter family member 1C1 [Sus scrofa].
Length = 555
Score = 178 bits (451), Expect = 1e-44
Identities = 118/432 (27%), Positives = 192/432 (44%), Gaps = 19/432 (4%)
Frame = +2
Query: 2 YVDAVFIDTSNLDITPDDPRWIXXXXXXXXXXXXXXXXXXXXXXXXPQSLP---PHSDPA 172
Y D F++ +L ITP DP+W+ P+SLP D
Sbjct: 93 YXDIGFVNLDHLTITPKDPQWVGAWWLGYLIAGIISLLAAVPFWFLPKSLPRTQSREDSN 152
Query: 173 LESEQA---MLPEREYERPKPSNGVLRHPLEPDTSASCFQQLRVIPKVTKHLLSNPVFTC 343
SE++ M +Y+ P A + + K L NPV+
Sbjct: 153 SSSEKSKFIMDDHTDYQTPLGEK------------AKIMEMAKDFLPSLKSLFGNPVYFL 200
Query: 344 IILAACMEIAVVAGFAAFLGKYLEQQFNLTTSSANQLLGMTAIPCACLGIFXXXXXXXXX 523
+ A+ ++ + G + KY+EQQ+ ++S AN ++G+ IP LGIF
Sbjct: 201 YLCASTIQFNSLFGMVTYKPKYIEQQYGQSSSKANFVIGLINIPAVALGIFSGGIVMKKF 260
Query: 524 XXXXXXXIRMAMLVNLVSTACYVSFLFLGCDTGPVAGVTVPYGNTSAPGSTLDP--YSPC 697
++ + +++ ++S LGC+ VAG+TV Y T P S + +S C
Sbjct: 261 KIGVCGASKLYLGSSVLGYLLFLSLFALGCENSDVAGLTVTYQGTK-PVSYHERALFSDC 319
Query: 698 NKNCECQTDSFTPVCGADGITYLSACFAGCNSTNLTG-------CACLTTVPPE--NATV 850
N C+C + P+CG +GITY++AC AGC ++ +G C C+ T + N++
Sbjct: 320 NSRCKCSETKWEPMCGENGITYVTACLAGCQTSTGSGKTTIFYNCTCVGTAASKSGNSSG 379
Query: 851 VPGKCPSP-GCQEAFLTFLCVMCVCSMIGAMAQTPSVIILIRTVSPELKSYAXXXXXXXX 1027
+ G+C GC FL FL + + S ++ P I+L+R + P+LKS+A
Sbjct: 380 MVGRCQKDNGCPRMFLYFLIISVITSYTLSLGGIPGYILLLRCIKPQLKSFALGIYTLAV 439
Query: 1028 XXXXXXXXXXXXXAGIDSTCLFWS-TFCGEQGACVLYDNVAYRYLYVSIAIALKSFAFIL 1204
ID++CL W CG +GAC LYD+ A+R++Y+ + + L + L
Sbjct: 440 RVLAGIPSPVYFGVLIDTSCLKWGFKRCGSRGACRLYDSNAFRHIYLGLTMMLGIMSIFL 499
Query: 1205 YTTTWQCLRKNY 1240
L+KNY
Sbjct: 500 SIAVLFALKKNY 511
>ref|NP_001116667.2| solute carrier organic anion transporter family member 2A1 [Sus
scrofa].
Length = 644
Score = 173 bits (438), Expect = 3e-43
Identities = 117/436 (26%), Positives = 192/436 (44%), Gaps = 12/436 (2%)
Frame = +2
Query: 2 YVDAVFIDTSNLDITPDDPRWIXXXXXXXXXXXXXXXXXXXXXXXXPQSLPPHSDPALES 181
+VD +DT+ ++++P DPRWI P+++ +E
Sbjct: 233 FVDYGRVDTATVNLSPGDPRWIGAWWLGLLISSASLVVSSFPFFFFPRAM----SRGMER 288
Query: 182 EQAMLPE-REYERPKPSNGVLRHPLEPDTSASCFQQLRVIPKVTKHLLSNPVFTCIILAA 358
AM E R+ E KP + ++ ++ P++ LL NP+F ++LA
Sbjct: 289 TPAMADEARKMEEAKPRSSLVDF-------------IKRFPRIFLRLLMNPLFMLVVLAQ 335
Query: 359 CMEIAVVAGFAAFLGKYLEQQFNLTTSSANQLLGMTAIPCACLGIFXXXXXXXXXXXXXX 538
C +V+AG + FL K+LE+Q+ + + AN L+G +P A LG+
Sbjct: 336 CTFSSVIAGLSTFLNKFLEKQYGASAAYANFLIGAVNLPAAALGMLFGGILMKRFVFSLQ 395
Query: 539 XXIRMAMLVNLVSTACYVSFLFLGCDTGPVAGVTVPYGNTSAPGSTLDPYSPCNKNCECQ 718
R+A + +S F+GC T VA V P ++S L C K+C C
Sbjct: 396 TIPRVAATIITISMILCAPLFFMGCSTPKVAEVYPPSTSSSIHPQPL----ACRKDCSCP 451
Query: 719 TDSFTPVCGADGITYLSACFAGCNSTNLT----------GCACLTTVPPENATVVPGKCP 868
F PVCG +G+ YLS C AGC+ N++ C+C V +A+ G CP
Sbjct: 452 DSLFHPVCGDNGVEYLSPCHAGCSDINVSSIASKQLTYLNCSC---VSGASASAKTGPCP 508
Query: 869 SPGCQEAFLTFLCVMCVCSMIGAMAQTPSVIILIRTVSPELKSYAXXXXXXXXXXXXXXX 1048
P C L + ++ ++I ++ P ++++R V+ E KS+A
Sbjct: 509 IP-CAHFLLPAIFLISFVALIACVSHNPLYMMVLRVVNQEEKSFAIGVQFLLMRLLAWLP 567
Query: 1049 XXXXXXAGIDSTCLFWSTFC-GEQGACVLYDNVAYRYLYVSIAIALKSFAFILYTTTWQC 1225
ID +C+ WS+ C G +GAC YDN A R Y+ + + K+ +L T
Sbjct: 568 SPALYGLTIDYSCIRWSSQCSGRRGACAYYDNDALRDRYLGLQVGYKALGTLLLLFTSWR 627
Query: 1226 LRKNYKRYIKNHEGGL 1273
++KN + ++ GL
Sbjct: 628 VKKNKEYNVQEKAAGL 643
>ref|XP_003354276.1| PREDICTED: solute carrier organic anion transporter family member 4C1
[Sus scrofa].
Length = 715
Score = 165 bits (418), Expect = 7e-41
Identities = 111/411 (27%), Positives = 174/411 (42%), Gaps = 18/411 (4%)
Frame = +2
Query: 14 VFIDTSN---LDITPDDPRWIXXXXXXXXXXXXXXXXXXXXXXXXPQSLPPHSDPALESE 184
V+ID + +D+T DDPRW+ P+ LP E +
Sbjct: 279 VYIDVDSGQSIDVTEDDPRWLGAWWIGFLLSWLLAWSLIIPFSCFPKHLPGTE----EIQ 334
Query: 185 QAMLPEREYERPKPSNGVLRHPLEPDTSASCFQQLRVIPKVTKHLLSNPVFTCIILAACM 364
+ + +G ++H T + Q + P K+L+ N VF C++L+ C
Sbjct: 335 DGKISQAH------QSGSVQH-----TDRNFGQSFKDFPAAVKNLMRNTVFMCLVLSTCS 383
Query: 365 EIAVVAGFAAFLGKYLEQQFNLTTSSANQLLGMTAIPCACLGIFXXXXXXXXXXXXXXXX 544
E V GFA FL K++E QF ++SSA L G +P A LG
Sbjct: 384 EALVATGFATFLPKFVENQFGFSSSSAATLAGSVLVPGAALGQILGGMLVSKFKMTCKNI 443
Query: 545 IRMAMLVNLVSTACYVSFLFLGCDTGPVAGVTVPYGNTSAPGSTLDPYSPCNKNCECQTD 724
++ +L +++ + FL+ C+ P AGV+ Y T G +PCN NC C
Sbjct: 444 MKFTLLTTVIALILSLVFLYTTCENAPFAGVSESYNGTGQLGKLT---APCNANCNCLRS 500
Query: 725 SFTPVCGADGITYLSACFAGCNST-------NLTGCACL-------TTVPPENATVVPGK 862
+ P+CG DG+ Y S C+AGC ++ C+C+ T + GK
Sbjct: 501 YYYPLCGGDGVQYFSPCYAGCTNSISKKHPKVYQNCSCIKRKIEITPTPSSPDFEAKAGK 560
Query: 863 CPSPGCQEAFLTFLCVMCVCSMIGAMAQTPSVIILIRTVSPELKSYAXXXXXXXXXXXXX 1042
C S C+ + FL + + MA TP + ++R V+ +S A
Sbjct: 561 C-SVQCKNLPI-FLGIFFAAIVFTFMAGTPITVSILRCVNQNQRSLALGIQCMLLRILGT 618
Query: 1043 XXXXXXXXAGIDSTCLFWS-TFCGEQGACVLYDNVAYRYLYVSIAIALKSF 1192
IDSTC+ W CG +GAC +Y+N+ Y++++I+I K F
Sbjct: 619 IPGPIIFGIAIDSTCVLWDINKCGIKGACWVYNNIQMAYMFMAISIICKIF 669
>ref|XP_001925055.2| PREDICTED: LOW QUALITY PROTEIN: solute carrier organic anion
transporter family member 5A1-like [Sus scrofa].
Length = 855
Score = 160 bits (406), Expect = 2e-39
Identities = 118/473 (24%), Positives = 194/473 (41%), Gaps = 37/473 (7%)
Frame = +2
Query: 17 FIDTSN-LDITPDDPRWIXXXXXXXXXXXXXXXXXXXXXXXXPQSLPPHSDPALESEQAM 193
++D N + + +DPR+I P+ LPP + + +
Sbjct: 330 YVDPRNPVHLNQNDPRFIGNWWSGFLLCAIAMFLVIFPMFTFPKKLPPRHKKMKKKKYSA 389
Query: 194 LPEREYERPKPSNGVLRHPLEPDTSASCFQQLRVIPKVTKHLLSNPVFTCIILAACMEIA 373
+ + K + +S + +R +P+ +LSN F + L+ E A
Sbjct: 390 NVAGDDDVVKEKPNSCEQADKKVSSIGFGKDVRDLPRAAVRILSNMTFLFVSLSYTAESA 449
Query: 374 VVAGFAAFLGKYLEQQFNLTTSSANQLLGMTAIPCACLGIFXXXXXXXXXXXXXXXXIRM 553
+V F F+ K++E QF + S+A+ G+ +P A +GI ++
Sbjct: 450 IVTAFITFIPKFIESQFGIPASNASIYTGVVIVPSAGVGIVLGGYIIKKLKLGARESAKL 509
Query: 554 AMLVNLVSTACYVSFLFLGCDTGPVAGVTVPYGNTSAPGSTLDPYS---PCNKNCECQTD 724
AM+ + VS C+ + +GC++ + G+ +PY T+ P T + CN NC C+
Sbjct: 510 AMICSGVSLLCFSTLFIVGCESINLGGINIPY--TTGPSLTRPHRNLTGSCNVNCGCKIH 567
Query: 725 SFTPVCGADGITYLSACFAGC--------NSTNLTGCACLTT----VPP----------- 835
+ PVCG+DGITY + C AGC N T C C+ + PP
Sbjct: 568 EYKPVCGSDGITYFNPCLAGCVHSGNMSTGIRNYTECTCVQSRQVITPPTVGQRSQLRVV 627
Query: 836 -------ENATVVPGKCPSPGCQEAFLTFLCVMCVCSMIGAMAQTPSVIILIRTVSPELK 994
N V GKC C + FL + + + I A AQ ++I+ +R+V E +
Sbjct: 628 IVKTYLNANGYAVSGKCKRT-C-NTLIPFLVFLFIVTFITACAQPSAIIVTLRSVEDEER 685
Query: 995 SYAXXXXXXXXXXXXXXXXXXXXXAGIDSTCLFWSTFCGEQGACVLYDNVAYRYLYVSIA 1174
+A A ID+TC+ W CG QG+C Y+ ++R++Y +A
Sbjct: 686 PFALGMQFVLLRTLAYIPTPIYFGAVIDTTCMLWQQECGVQGSCWEYNVTSFRFVYFGLA 745
Query: 1175 IALKSFAFILYTTTWQCLRKNYKRYIKN--HEGGLST-SEFFASTLTLDNLGR 1324
LK FI W ++ + + E LST SE T + D R
Sbjct: 746 AGLKFVGFIFIFLAWYSIKYKEEELQRQRWREFPLSTVSEMVGHTDSADKYAR 798
>ref|XP_003129708.2| PREDICTED: solute carrier organic anion transporter family member
2B1-like [Sus scrofa].
Length = 835
Score = 155 bits (391), Expect = 9e-38
Identities = 109/440 (24%), Positives = 183/440 (41%), Gaps = 26/440 (5%)
Frame = +2
Query: 2 YVDAVFIDTSNLDITPDDPRWIXXXXXXXXXXXXXXXXXXXXXXXXPQSLPPHS------ 163
YVD + + +T DPRW+ P+ +P
Sbjct: 378 YVDIDRMPAGGISLTSKDPRWVGAWWLGFLISAGAVALAAIPYFFFPKEMPKEKHELRFR 437
Query: 164 --------DPALESEQAMLPEREYERPKPSNGVLRHPLEPDTSASCFQQLRVIPKVTKHL 319
P + E + + P+ +G+ + + PD + Q ++V P+V
Sbjct: 438 RKVLAVSDSPVSKGEDSPSEQSPGASPEKKDGLAQ--MAPDLTV--IQFIKVFPRVLLRT 493
Query: 320 LSNPVFTCIILAACMEIAVVAGFAAFLGKYLEQQFNLTTSSANQLLGMTAIPCACLGIFX 499
L +P+F ++L+ ++VAG A FL K+LE+QF++T S AN L+G IP A LGI
Sbjct: 494 LRHPIFLLVVLSQVCMSSMVAGMATFLPKFLERQFSVTASYANLLIGCLTIPLAILGIVA 553
Query: 500 XXXXXXXXXXXXXXXIRMAMLVNLVSTACYVSFLFLGCDTGPVAGVTVPYGNTSAPGSTL 679
+ +L L+ F+GC T +AG+ G + PG L
Sbjct: 554 GGILVKRLRLGPMHCGILCLLGALLCLLLSTPLFFMGCSTHHIAGINHQPG--AQPG--L 609
Query: 680 DPYSPCNKNCECQTDSFTPVCGADG-ITYLSACFAGCNSTNL-----------TGCACLT 823
+ + C + C C +D F PVC + + YL+ C AGC S + T C+C+
Sbjct: 610 ELFPGCMEPCSCPSDDFNPVCDSSARVEYLTPCHAGCTSRLVQEARDKSQVFYTNCSCVA 669
Query: 824 TVPPENATVVPGKCPSPGCQEAFLTFLCVMCVCSMIGAMAQTPSVIILIRTVSPELKSYA 1003
P V G C SP C L F+ ++ + + + ++ TPS ++++R V E K+ A
Sbjct: 670 GGGP----VPAGSCESP-CSHLVLPFMILVSLGAAVASVTHTPSFMLILRGVKKEDKTLA 724
Query: 1004 XXXXXXXXXXXXXXXXXXXXXAGIDSTCLFWSTFCGEQGACVLYDNVAYRYLYVSIAIAL 1183
+ ID+TC++W+ CG + C YD+ R ++ +
Sbjct: 725 VGIQFMLQRVLAWMPSPVIHGSAIDTTCVYWAQSCGRRAVCRYYDHDLLRNRFIGLQFFF 784
Query: 1184 KSFAFILYTTTWQCLRKNYK 1243
K+ + + LR+ K
Sbjct: 785 KTGSLACFALILAILRQQEK 804
>ref|XP_003355596.1| PREDICTED: solute carrier organic anion transporter family member 1B3
[Sus scrofa].
Length = 684
Score = 150 bits (379), Expect = 2e-36
Identities = 107/427 (25%), Positives = 177/427 (41%), Gaps = 13/427 (3%)
Frame = +2
Query: 2 YVDAVFIDTSNLDITPDDPRWIXXXXXXXXXXXXXXXXXXXXXXXXPQSLPPHSDPALES 181
YVD F+D S + ITP D RW+ P+SL P E
Sbjct: 234 YVDIGFVDLSTIRITPKDSRWVGAWWLGFLVAGLISIISSIPFFFLPKSL---DKPQKER 290
Query: 182 EQAM-LPEREYERPKPSNGVLRHPLEPDTSASCFQQLRVIPKVTKHLLSNPVFTCIILAA 358
+ ++ LP ++ ER + N T Q L K +L+NP++ +
Sbjct: 291 KASVPLPVQKEERSQMVNLTKDRQNITKTVNGFIQSL-------KSILTNPLYVITLFLT 343
Query: 359 CMEIAVVAGFAAFLGKYLEQQFNLTTSSANQLLGMTAIPCACLGIFXXXXXXXXXXXXXX 538
++ + G ++ KY+EQQ+ + S N L G IP GIF
Sbjct: 344 LIQASSYIGSFTYVFKYVEQQYGQSASETNILFGFITIPTFATGIFSGGYIVRKFKLTLV 403
Query: 539 XXIRMAMLVNLVSTACYVSFLFLGCDTGPVAGVTVPY-GNTSAPGSTLDPYSPCNKNCEC 715
+++ + ++ ++ L C+ VAG+T+ Y GN P S CN +C C
Sbjct: 404 GIAKLSFYTSALAFLFHLLNFALICENKSVAGLTLTYDGNNPLSSHINAPLSYCNSDCNC 463
Query: 716 QTDSFTPVCGADGITYLSACFAGCNSTN-------LTGCAC--LTTVPPENATVVPGKCP 868
+ PVC +GITYLS C AGC S++ C+C + N +V G+CP
Sbjct: 464 DKSQWEPVCADNGITYLSPCLAGCKSSSGSKKSMVFHNCSCVEVNDFQTRNNSVKLGECP 523
Query: 869 -SPGCQEAFLTFLCVMCVCSMIGAMAQTPSVIILIRTVSPELKSYAXXXXXXXXXXXXXX 1045
+ C+ F ++ V + ++ +++++ + V PE+KS A
Sbjct: 524 RNDQCRRKFYIYIVVQILIIFSSSLGTISNMMLIFKNVQPEMKSLAVGFHSLTIRTLGGI 583
Query: 1046 XXXXXXXAGIDSTCLFWS-TFCGEQGACVLYDNVAYRYLYVSIAIALKSFAFILYTTTWQ 1222
A ID C+ WS G+QG+C +Y++ Y + ++ LK +LY
Sbjct: 584 PAPIYFGALIDRACMKWSINNSGKQGSCRIYNSTLYGNTFFGLSTCLKLPPLVLYVVLIS 643
Query: 1223 CLRKNYK 1243
++K Y+
Sbjct: 644 AMKKKYQ 650
>ref|XP_003357247.1| PREDICTED: solute carrier organic anion transporter family member
2B1-like [Sus scrofa].
Length = 377
Score = 141 bits (356), Expect = 1e-33
Identities = 92/329 (27%), Positives = 147/329 (44%), Gaps = 12/329 (3%)
Frame = +2
Query: 293 VIPKVTKHLLSNPVFTCIILAACMEIAVVAGFAAFLGKYLEQQFNLTTSSANQLLGMTAI 472
V P+V L +P+F ++L+ ++VAG A FL K+LE+QF++T S AN L+G I
Sbjct: 27 VFPRVLLRTLRHPIFLLVVLSQVCMSSMVAGMATFLPKFLERQFSVTASYANLLIGCLTI 86
Query: 473 PCACLGIFXXXXXXXXXXXXXXXXIRMAMLVNLVSTACYVSFLFLGCDTGPVAGVTVPYG 652
P A LGI + +L L+ F+GC T +AG+ G
Sbjct: 87 PLAILGIVAGGILVKRLRLGPMHCGILCLLGALLCLLLSTPLFFMGCSTHHIAGINHQPG 146
Query: 653 NTSAPGSTLDPYSPCNKNCECQTDSFTPVCGADG-ITYLSACFAGCNSTNL--------- 802
+ PG L+ + C + C C +D F PVC + + YL+ C AGC S +
Sbjct: 147 --AQPG--LELFPGCMEPCSCPSDDFNPVCDSSARVEYLTPCHAGCTSRLVQEARDKSQV 202
Query: 803 --TGCACLTTVPPENATVVPGKCPSPGCQEAFLTFLCVMCVCSMIGAMAQTPSVIILIRT 976
T C L P V G C SP C L F+ ++ + + + ++ TPS ++++R
Sbjct: 203 GGTHCPVLVXXGP----VPAGSCESP-CSHLVLPFMILVSLGAAVASVTHTPSFMLILRG 257
Query: 977 VSPELKSYAXXXXXXXXXXXXXXXXXXXXXAGIDSTCLFWSTFCGEQGACVLYDNVAYRY 1156
V E K+ A + ID+TC++W+ CG + C YD+ R
Sbjct: 258 VKKEDKTLAVGIQFMLQRVLAWMPSPVIHGSAIDTTCVYWAQSCGRRAVCRYYDHDLLRN 317
Query: 1157 LYVSIAIALKSFAFILYTTTWQCLRKNYK 1243
++ + K+ + + LR+ K
Sbjct: 318 RFIGLQFFFKTGSLACFALILAILRQQEK 346
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 44,060,678
Number of extensions: 1269287
Number of successful extensions: 5036
Number of sequences better than 1.0e-05: 9
Number of HSP's gapped: 4951
Number of HSP's successfully gapped: 9
Length of query: 603
Length of database: 11,343,932
Length adjustment: 105
Effective length of query: 498
Effective length of database: 8,729,747
Effective search space: 4347414006
Effective search space used: 4347414006
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-003789
(1811 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr07 856 0.0
>Sscrofa_Chr07
|| Length = 134764511
Score = 856 bits (432), Expect = 0.0
Identities = 432/432 (100%)
Strand = Plus / Minus
Query: 1037 ggcttcatcccccctcccctcatctttggagctggcatcgactccacctgcctgttctgg 1096
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92730047 ggcttcatcccccctcccctcatctttggagctggcatcgactccacctgcctgttctgg 92729988
Query: 1097 agcacgttctgtggggagcaaggcgcctgcgtcctctacgacaacgtggcctacagatac 1156
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92729987 agcacgttctgtggggagcaaggcgcctgcgtcctctacgacaacgtggcctacagatac 92729928
Query: 1157 ctgtatgtcagcatcgccatcgcgctcaagtcctttgccttcatcctctacaccaccacg 1216
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92729927 ctgtatgtcagcatcgccatcgcgctcaagtcctttgccttcatcctctacaccaccacg 92729868
Query: 1217 tggcagtgcctgcggaaaaactataaacgctacatcaaaaaccacgagggcgggctgagc 1276
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92729867 tggcagtgcctgcggaaaaactataaacgctacatcaaaaaccacgagggcgggctgagc 92729808
Query: 1277 accagtgagttctttgcctctactctgaccctagacaatctggggagggaccccgtgccc 1336
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92729807 accagtgagttctttgcctctactctgaccctagacaatctggggagggaccccgtgccc 92729748
Query: 1337 gccaaccagacacataggacaaaatttatctataaccttgaagatcatgagtggtgtgag 1396
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92729747 gccaaccagacacataggacaaaatttatctataaccttgaagatcatgagtggtgtgag 92729688
Query: 1397 aacatggagtctgttttatagtgaccgaggagggttgaactctgtattagtcatccaagg 1456
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92729687 aacatggagtctgttttatagtgaccgaggagggttgaactctgtattagtcatccaagg 92729628
Query: 1457 gtcatatttcct 1468
||||||||||||
Sbjct: 92729627 gtcatatttcct 92729616
Score = 523 bits (264), Expect = e-145
Identities = 264/264 (100%)
Strand = Plus / Minus
Query: 30 gtaacctggacatcaccccggacgacccccgctggattggagcctggtggggtggctttc 89
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92786277 gtaacctggacatcaccccggacgacccccgctggattggagcctggtggggtggctttc 92786218
Query: 90 tgctctgcggtgccttactcttcttctcttccctcttgatgttcgggtttccacagtctc 149
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92786217 tgctctgcggtgccttactcttcttctcttccctcttgatgttcgggtttccacagtctc 92786158
Query: 150 tgcccccgcactcagaccctgccctggagagcgagcaggccatgctccccgaaagagaat 209
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92786157 tgcccccgcactcagaccctgccctggagagcgagcaggccatgctccccgaaagagaat 92786098
Query: 210 acgagagacccaagcccagcaacggggtcctgaggcaccccttggagccggacaccagcg 269
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92786097 acgagagacccaagcccagcaacggggtcctgaggcaccccttggagccggacaccagcg 92786038
Query: 270 cctcctgcttccagcagctgagag 293
||||||||||||||||||||||||
Sbjct: 92786037 cctcctgcttccagcagctgagag 92786014
Score = 406 bits (205), Expect = e-110
Identities = 211/214 (98%)
Strand = Plus / Minus
Query: 1549 ggcacctttatcctttttctcaaaatcagagccagacaggattcagaataaggagagcgt 1608
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92729535 ggcacctttatcctttttctcaaaatcagagccagacaggattcagaataaggagagcgt 92729476
Query: 1609 gggatcacgtggttgacgtgcgaccttggggctcagagtctactctttgaaggcacctca 1668
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92729475 gggatcacgtggttgacgtgcgaccttggggctcagagtctactctttgaaggcacctca 92729416
Query: 1669 tggtttttcaggatgctgacagctgcaagcaacaggcactgccaaattcaggnaacagtg 1728
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 92729415 tggtttttcaggatgctgacagctgcaagcaacaggcactgccaaattcagggaacagtg 92729356
Query: 1729 gtggccagcttggangacngacctttctggatat 1762
|||||||||||||| ||| |||||||||||||||
Sbjct: 92729355 gtggccagcttggaggacggacctttctggatat 92729322
Score = 396 bits (200), Expect = e-107
Identities = 200/200 (100%)
Strand = Plus / Minus
Query: 458 gggatgactgcgatcccatgtgcctgtctgggaatcttcctaggcggtctcctggtgaag 517
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92764720 gggatgactgcgatcccatgtgcctgtctgggaatcttcctaggcggtctcctggtgaag 92764661
Query: 518 aaactcagcctgtccgccctcggggccattcggatggccatgctcgtcaacctggtgtcc 577
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92764660 aaactcagcctgtccgccctcggggccattcggatggccatgctcgtcaacctggtgtcc 92764601
Query: 578 accgcttgctacgtctccttcctcttcctgggctgtgacacgggccccgtggctggggtt 637
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92764600 accgcttgctacgtctccttcctcttcctgggctgtgacacgggccccgtggctggggtt 92764541
Query: 638 actgttccctatggaaacac 657
||||||||||||||||||||
Sbjct: 92764540 actgttccctatggaaacac 92764521
Score = 353 bits (178), Expect = 2e-94
Identities = 178/178 (100%)
Strand = Plus / Minus
Query: 796 gaatctcaccggctgtgcatgcctcacgactgtcccgcctgagaatgcaactgtggttcc 855
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92747594 gaatctcaccggctgtgcatgcctcacgactgtcccgcctgagaatgcaactgtggttcc 92747535
Query: 856 tggaaagtgccccagtcccgggtgccaagaggccttcctcaccttcctgtgtgtgatgtg 915
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92747534 tggaaagtgccccagtcccgggtgccaagaggccttcctcaccttcctgtgtgtgatgtg 92747475
Query: 916 tgtctgcagcatgattggggcaatggctcagacgccctcggtcatcatccttatcagg 973
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92747474 tgtctgcagcatgattggggcaatggctcagacgccctcggtcatcatccttatcagg 92747417
Score = 333 bits (168), Expect = 2e-88
Identities = 168/168 (100%)
Strand = Plus / Minus
Query: 292 agtgatcccgaaggtcaccaagcacctgctctcaaaccctgtgttcacctgcattatcct 351
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92768686 agtgatcccgaaggtcaccaagcacctgctctcaaaccctgtgttcacctgcattatcct 92768627
Query: 352 ggccgcctgcatggagattgcagtggtggctggctttgctgccttcttagggaagtatct 411
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92768626 ggccgcctgcatggagattgcagtggtggctggctttgctgccttcttagggaagtatct 92768567
Query: 412 ggaacagcagtttaacctcaccacctcttctgccaaccagctgctcgg 459
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92768566 ggaacagcagtttaacctcaccacctcttctgccaaccagctgctcgg 92768519
Score = 276 bits (139), Expect = 4e-71
Identities = 139/139 (100%)
Strand = Plus / Minus
Query: 658 ctcagcacctggctcgaccctggacccttactcgccctgcaataaaaactgtgaatgcca 717
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92763401 ctcagcacctggctcgaccctggacccttactcgccctgcaataaaaactgtgaatgcca 92763342
Query: 718 aactgattccttcactcccgtgtgtggggcagatggcatcacgtacctgtctgcctgctt 777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92763341 aactgattccttcactcccgtgtgtggggcagatggcatcacgtacctgtctgcctgctt 92763282
Query: 778 tgctggctgcaacagcacg 796
|||||||||||||||||||
Sbjct: 92763281 tgctggctgcaacagcacg 92763263
Score = 135 bits (68), Expect = 9e-29
Identities = 68/68 (100%)
Strand = Plus / Minus
Query: 971 aggacagtcagccctgaactcaagtcttacgccctgggagttcttttcctcctcctccgt 1030
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92742876 aggacagtcagccctgaactcaagtcttacgccctgggagttcttttcctcctcctccgt 92742817
Query: 1031 ttgttggg 1038
||||||||
Sbjct: 92742816 ttgttggg 92742809
Score = 65.9 bits (33), Expect = 7e-08
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 1 ctatgtggatgcagtcttcattgacacaagtaa 33
|||||||||||||||||||||||||||||||||
Sbjct: 92795977 ctatgtggatgcagtcttcattgacacaagtaa 92795945
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 47,643,481
Number of extensions: 248
Number of successful extensions: 248
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 248
Number of HSP's successfully gapped: 9
Length of query: 1811
Length of database: 2,808,509,378
Length adjustment: 22
Effective length of query: 1789
Effective length of database: 2,808,408,574
Effective search space: 5024242938886
Effective search space used: 5024242938886
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)