Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-003832
(1038 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_803452.1| glycine N-phenylacetyltransferase [Bos taurus]. 461 e-130
Alignment gi|NP_001095518.1| hypothetical protein LOC518623 [Bos taurus]. 385 e-107
Alignment gi|NP_803479.1| glycine N-acyltransferase [Bos taurus]. 379 e-105
Alignment gi|NP_001178259.1| glycine N-acyltransferase-like protein 2 [Bo... 219 2e-57
Alignment gi|XP_002693817.1| PREDICTED: glycine-N-acyltransferase-like 2-... 219 2e-57
Alignment gi|NP_001138533.1| glycine N-acyltransferase-like protein 3 [Bo... 165 7e-41
>ref|NP_803452.1| glycine N-phenylacetyltransferase [Bos taurus].
Length = 296
Score = 461 bits (1186), Expect = e-130
Identities = 224/282 (79%), Positives = 243/282 (86%), Gaps = 1/282 (0%)
Frame = +1
Query: 193 MLHLQSAQMLLRLEKCLRKSLPESLKVYGTVFHMNQGNPFKLKALVDKWPDFNTVVIRPQ 372
M HLQ Q+L LEK LRKSLPESLKVYGTVFHMNQGNPF LKALVDKWPDF TVVIRPQ
Sbjct: 1 MFHLQGPQLLQMLEKSLRKSLPESLKVYGTVFHMNQGNPFNLKALVDKWPDFKTVVIRPQ 60
Query: 373 EQEMTDDFDHHTNTYQIYSKDLKNCHEA-LSTSDVINWKQHLQIQSSQPSLDEVIQNLAT 549
EQEM DDFDH+TNTYQIYSKDL NC E+ L+TSDVINWKQHLQIQSSQ SL+EV+QNLA
Sbjct: 61 EQEMADDFDHYTNTYQIYSKDLNNCQESXLATSDVINWKQHLQIQSSQSSLNEVVQNLAA 120
Query: 550 TKFIKVKQTQHILYITPEMAIKLLPSLPETKNLPPGYSRPKASNQEVFQVSSMDVTHAAL 729
TKF+KV+ TQ ILY+ PE A KLLPSLPETKNLP GY PKA NQE+F++SSMD THAAL
Sbjct: 121 TKFVKVEHTQCILYVMPETARKLLPSLPETKNLPVGYGAPKAINQEMFKLSSMDPTHAAL 180
Query: 730 VNKFWHFGGNERSQRFIGRCIRNFLSICLLGPEGTPISWSLMDQTGEIRMGATLPEYRGQ 909
VNKFWHFGGNERSQRFI RCIR F + CLLGPEGTP SWSLMDQTGEIRMGATLPEYRG
Sbjct: 181 VNKFWHFGGNERSQRFIERCIRAFPTFCLLGPEGTPASWSLMDQTGEIRMGATLPEYRGH 240
Query: 910 GLISHLLCVHIQALDERGFPTYMHTDKANKTVQKINHKMHPI 1035
GLISH+L VH +ALD+ G P Y HTDKANK VQK++H +H I
Sbjct: 241 GLISHMLAVHTRALDQLGIPVYNHTDKANKIVQKVSHNLHHI 282
>ref|NP_001095518.1| hypothetical protein LOC518623 [Bos taurus].
Length = 295
Score = 385 bits (989), Expect = e-107
Identities = 188/281 (66%), Positives = 217/281 (77%)
Frame = +1
Query: 193 MLHLQSAQMLLRLEKCLRKSLPESLKVYGTVFHMNQGNPFKLKALVDKWPDFNTVVIRPQ 372
MLHLQ QML LEK LRKS+P SLKVYGT FH+NQGNPFKLKALVDKWPDFNTVVIRPQ
Sbjct: 1 MLHLQGPQMLQMLEKSLRKSIPASLKVYGTTFHINQGNPFKLKALVDKWPDFNTVVIRPQ 60
Query: 373 EQEMTDDFDHHTNTYQIYSKDLKNCHEALSTSDVINWKQHLQIQSSQPSLDEVIQNLATT 552
EQEMTDD DH+TNTYQ+YSKD K C E L + +VINWKQHLQIQSSQ SLD+VI+NLA T
Sbjct: 61 EQEMTDDLDHYTNTYQVYSKDPKKCQEFLGSPEVINWKQHLQIQSSQSSLDDVIKNLAAT 120
Query: 553 KFIKVKQTQHILYITPEMAIKLLPSLPETKNLPPGYSRPKASNQEVFQVSSMDVTHAALV 732
K KVKQTQ LY+ E KL SL E KN+ + K+S+Q++ +S++D HA LV
Sbjct: 121 KSGKVKQTQCFLYMASEPGKKLAASLLEAKNVSGDGGKHKSSHQKMLTLSTLDPAHAVLV 180
Query: 733 NKFWHFGGNERSQRFIGRCIRNFLSICLLGPEGTPISWSLMDQTGEIRMGATLPEYRGQG 912
NK W+FGGNERS+RFI RCI+ F S CLLGPEG P+SW LMDQTGE+RM TLPEYR QG
Sbjct: 181 NKLWYFGGNERSRRFIERCIQTFPSTCLLGPEGAPVSWMLMDQTGELRMAGTLPEYRAQG 240
Query: 913 LISHLLCVHIQALDERGFPTYMHTDKANKTVQKINHKMHPI 1035
LIS++ CV +Q LD+ GFP Y H DKAN +QK+ M I
Sbjct: 241 LISYISCVQVQTLDKLGFPLYSHVDKANHIMQKVCSNMQSI 281
>ref|NP_803479.1| glycine N-acyltransferase [Bos taurus].
Length = 295
Score = 379 bits (973), Expect = e-105
Identities = 182/282 (64%), Positives = 221/282 (78%)
Frame = +1
Query: 193 MLHLQSAQMLLRLEKCLRKSLPESLKVYGTVFHMNQGNPFKLKALVDKWPDFNTVVIRPQ 372
M LQ AQML LEK LRKSLP SLKVYGTV HMN GNPF LKALVDKWPDF TVVIRPQ
Sbjct: 1 MFLLQGAQMLQMLEKSLRKSLPMSLKVYGTVMHMNHGNPFNLKALVDKWPDFQTVVIRPQ 60
Query: 373 EQEMTDDFDHHTNTYQIYSKDLKNCHEALSTSDVINWKQHLQIQSSQPSLDEVIQNLATT 552
EQ+M DD DH+TNTY +YS+DLKNC E L +VINWKQHLQIQS+Q SL+EVIQNLA T
Sbjct: 61 EQDMKDDLDHYTNTYHVYSEDLKNCQEFLDLPEVINWKQHLQIQSTQSSLNEVIQNLAAT 120
Query: 553 KFIKVKQTQHILYITPEMAIKLLPSLPETKNLPPGYSRPKASNQEVFQVSSMDVTHAALV 732
K KVK++++ILY+ E +L PSL + KNLP G +PKA + E+F++SS+D +HAA+V
Sbjct: 121 KSFKVKRSKNILYMASETIKELTPSLLDVKNLPVGDGKPKAIDPEMFKLSSVDPSHAAVV 180
Query: 733 NKFWHFGGNERSQRFIGRCIRNFLSICLLGPEGTPISWSLMDQTGEIRMGATLPEYRGQG 912
N+FW FGGNERS RFI RCI++F + CLLGPEGTP+SWSLMDQTGE+RM TLPEYR QG
Sbjct: 181 NRFWLFGGNERSLRFIERCIQSFPNFCLLGPEGTPVSWSLMDQTGEMRMAGTLPEYRAQG 240
Query: 913 LISHLLCVHIQALDERGFPTYMHTDKANKTVQKINHKMHPIP 1038
L++H + Q L +RGFP Y H D N+ +QK++ ++ +P
Sbjct: 241 LVTHAIYQQAQCLLKRGFPVYSHVDPKNQIMQKMSQSLNHVP 282
>ref|NP_001178259.1| glycine N-acyltransferase-like protein 2 [Bos taurus].
Length = 299
Score = 219 bits (559), Expect = 2e-57
Identities = 115/276 (41%), Positives = 166/276 (60%), Gaps = 3/276 (1%)
Frame = +1
Query: 193 MLHLQSAQMLLRLEKCLRKSLPESLKVYGTVFHMNQGNPFKLKALVDKWPDFNTVVIRPQ 372
M L+ Q L L + L +S+PESLKVYGT+FH+ NPF L+ LVD WP++ TVVIRPQ
Sbjct: 1 MFVLREPQQLQILYESLEESIPESLKVYGTLFHIRNKNPFNLEVLVDAWPEYQTVVIRPQ 60
Query: 373 EQEMTDDFDHHTNTYQIYSKDLKNCHEALSTSDVINWKQHLQIQSSQPSLDEVIQNLATT 552
++EM DD D++TNTY I++K E L+ VINW+Q QIQ Q SL E IQ +A +
Sbjct: 61 KEEMKDDLDYYTNTYHIFTKAPDKLEEVLACPQVINWEQAFQIQGCQESLGEAIQKVAAS 120
Query: 553 KFIKVKQTQHILYITPEMAIKLLPSLPETKNLPPGYSRPKA---SNQEVFQVSSMDVTHA 723
K ++V + +L++ + ++ S + +L PK +E FQ +DV+HA
Sbjct: 121 KSVQVDYLRTVLFVFEKPTLE--ASSGDKMDLMKLLKIPKVLEDKRKETFQNIFLDVSHA 178
Query: 724 ALVNKFWHFGGNERSQRFIGRCIRNFLSICLLGPEGTPISWSLMDQTGEIRMGATLPEYR 903
LVN+ W G NE+S +++ RC++NF +L EG PISW L +Q+ EIRMG T P+YR
Sbjct: 179 RLVNEHWELGKNEKSLKYVERCLQNFAGFGVLSSEGKPISWFLTEQSCEIRMGYTFPKYR 238
Query: 904 GQGLISHLLCVHIQALDERGFPTYMHTDKANKTVQK 1011
GQG + + C I + P Y+H + + Q+
Sbjct: 239 GQGHMWQMGCHSIAYFFSKKIPFYIHAAEDKEKTQQ 274
>ref|XP_002693817.1| PREDICTED: glycine-N-acyltransferase-like 2-like [Bos taurus].
Length = 299
Score = 219 bits (559), Expect = 2e-57
Identities = 115/276 (41%), Positives = 166/276 (60%), Gaps = 3/276 (1%)
Frame = +1
Query: 193 MLHLQSAQMLLRLEKCLRKSLPESLKVYGTVFHMNQGNPFKLKALVDKWPDFNTVVIRPQ 372
M L+ Q L L + L +S+PESLKVYGT+FH+ NPF L+ LVD WP++ TVVIRPQ
Sbjct: 1 MFVLREPQQLQILYESLEESIPESLKVYGTLFHIRNKNPFNLEVLVDAWPEYQTVVIRPQ 60
Query: 373 EQEMTDDFDHHTNTYQIYSKDLKNCHEALSTSDVINWKQHLQIQSSQPSLDEVIQNLATT 552
++EM DD D++TNTY I++K E L+ VINW+Q QIQ Q SL E IQ +A +
Sbjct: 61 KEEMKDDLDYYTNTYHIFTKAPDKLEEVLACPQVINWEQAFQIQGCQESLGEAIQKVAAS 120
Query: 553 KFIKVKQTQHILYITPEMAIKLLPSLPETKNLPPGYSRPKA---SNQEVFQVSSMDVTHA 723
K ++V + +L++ + ++ S + +L PK +E FQ +DV+HA
Sbjct: 121 KSVQVDYLRTVLFVFEKPTLE--ASSGDKMDLMKLLKIPKVLEDKRKETFQNIFLDVSHA 178
Query: 724 ALVNKFWHFGGNERSQRFIGRCIRNFLSICLLGPEGTPISWSLMDQTGEIRMGATLPEYR 903
LVN+ W G NE+S +++ RC++NF +L EG PISW L +Q+ EIRMG T P+YR
Sbjct: 179 RLVNEHWELGKNEKSLKYVERCLQNFAGFGVLSSEGKPISWFLTEQSCEIRMGYTFPKYR 238
Query: 904 GQGLISHLLCVHIQALDERGFPTYMHTDKANKTVQK 1011
GQG + + C I + P Y+H + + Q+
Sbjct: 239 GQGHMWQMGCHSIAYFFSKKIPFYIHAAEDKEKTQQ 274
>ref|NP_001138533.1| glycine N-acyltransferase-like protein 3 [Bos taurus].
Length = 287
Score = 165 bits (417), Expect = 7e-41
Identities = 93/276 (33%), Positives = 145/276 (52%)
Frame = +1
Query: 202 LQSAQMLLRLEKCLRKSLPESLKVYGTVFHMNQGNPFKLKALVDKWPDFNTVVIRPQEQE 381
L + LL LEK L+ PESLKVYG V ++N+GNPF+ + ++D WPDF ++ R Q++
Sbjct: 4 LNCSTKLLLLEKMLKSHFPESLKVYGAVMNINRGNPFQKEVVLDSWPDFKAIITRRQKEA 63
Query: 382 MTDDFDHHTNTYQIYSKDLKNCHEALSTSDVINWKQHLQIQSSQPSLDEVIQNLATTKFI 561
TD+ DH+TN Y ++ KD+ + L VINW Q QIQ Q L +V + +A +K +
Sbjct: 64 ETDNLDHYTNAYAVFYKDVNAYRQLLEEHGVINWDQVFQIQGLQSELYDVSKAVADSKQV 123
Query: 562 KVKQTQHILYITPEMAIKLLPSLPETKNLPPGYSRPKASNQEVFQVSSMDVTHAALVNKF 741
VK +A LP + + N V Q++ + + L+N+
Sbjct: 124 DVK-----------LASFKAACLPPISTVDTSF----LMNSSV-QLTYLSIADVDLLNQT 167
Query: 742 WHFGGNERSQRFIGRCIRNFLSICLLGPEGTPISWSLMDQTGEIRMGATLPEYRGQGLIS 921
W GGNE+ +R+I I F S+C+ +G P+SWS+ DQ + G T+PE+R +G
Sbjct: 168 WSRGGNEQCRRYIANLISCFPSVCVRDDKGNPMSWSMTDQFATMCHGYTMPEHRRKGYNR 227
Query: 922 HLLCVHIQALDERGFPTYMHTDKANKTVQKINHKMH 1029
++ + + L RGFP + N T + +H
Sbjct: 228 LVILMLARKLQSRGFPCQGNILDDNTTSINLTKSIH 263
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 43,454,003
Number of extensions: 1240840
Number of successful extensions: 3677
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 3671
Number of HSP's successfully gapped: 6
Length of query: 346
Length of database: 17,681,374
Length adjustment: 103
Effective length of query: 243
Effective length of database: 14,273,310
Effective search space: 3468414330
Effective search space used: 3468414330
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-003832
(1038 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_540581.1| PREDICTED: similar to glycine-N-acyltransferase... 414 e-116
Alignment gi|XP_540580.2| PREDICTED: similar to glycine-N-acyltransferase... 405 e-113
Alignment gi|XP_852587.1| PREDICTED: similar to glycine-N-acyltransferase... 155 8e-38
>ref|XP_540581.1| PREDICTED: similar to glycine-N-acyltransferase isoform a [Canis
familiaris].
Length = 294
Score = 414 bits (1065), Expect = e-116
Identities = 196/276 (71%), Positives = 230/276 (83%)
Frame = +1
Query: 202 LQSAQMLLRLEKCLRKSLPESLKVYGTVFHMNQGNPFKLKALVDKWPDFNTVVIRPQEQE 381
LQ AQML LEK LRKSLPESLKVYGTVFHMNQGNPFKLKALVDKWPDF TVVIRPQE+E
Sbjct: 3 LQGAQMLQTLEKSLRKSLPESLKVYGTVFHMNQGNPFKLKALVDKWPDFTTVVIRPQEEE 62
Query: 382 MTDDFDHHTNTYQIYSKDLKNCHEALSTSDVINWKQHLQIQSSQPSLDEVIQNLATTKFI 561
M DDFDH+TNTYQIYSKDLKNC E L + +VINWKQHLQIQSSQPSL+EV+QNLA TK
Sbjct: 63 MIDDFDHYTNTYQIYSKDLKNCQEFLGSPEVINWKQHLQIQSSQPSLNEVMQNLAATKSF 122
Query: 562 KVKQTQHILYITPEMAIKLLPSLPETKNLPPGYSRPKASNQEVFQVSSMDVTHAALVNKF 741
+VKQTQ L+ KL+PSL + K L PG +PK NQE+F++SS+DVTHA VNKF
Sbjct: 123 QVKQTQCFLFFLANTIKKLVPSLLDVKKLAPGGGKPKPINQEMFKLSSLDVTHATFVNKF 182
Query: 742 WHFGGNERSQRFIGRCIRNFLSICLLGPEGTPISWSLMDQTGEIRMGATLPEYRGQGLIS 921
WHFGGNERSQRFI RCI+ F + CLLGPEGTP+SWSLMDQTGE+RM TLPEY+GQGL+S
Sbjct: 183 WHFGGNERSQRFIERCIQTFPTFCLLGPEGTPVSWSLMDQTGELRMAGTLPEYQGQGLVS 242
Query: 922 HLLCVHIQALDERGFPTYMHTDKANKTVQKINHKMH 1029
H++ +QAL++ FP Y HTDK++K +QK+++++H
Sbjct: 243 HVIYSQVQALEKLSFPLYSHTDKSHKIMQKMSYRLH 278
>ref|XP_540580.2| PREDICTED: similar to glycine-N-acyltransferase (predicted) [Canis
familiaris].
Length = 295
Score = 405 bits (1041), Expect = e-113
Identities = 195/278 (70%), Positives = 228/278 (82%)
Frame = +1
Query: 193 MLHLQSAQMLLRLEKCLRKSLPESLKVYGTVFHMNQGNPFKLKALVDKWPDFNTVVIRPQ 372
M HLQ +Q+L LEK LRKSLPESLKVYGT+FHMNQGNPFKLKALVDKWPDF TVV RPQ
Sbjct: 1 MFHLQGSQVLQMLEKSLRKSLPESLKVYGTIFHMNQGNPFKLKALVDKWPDFTTVVTRPQ 60
Query: 373 EQEMTDDFDHHTNTYQIYSKDLKNCHEALSTSDVINWKQHLQIQSSQPSLDEVIQNLATT 552
E+EM DDFDH+TNTYQIYSK+ +NC E L S VINWKQHLQIQS+Q SL+EVIQNLA
Sbjct: 61 EEEMADDFDHYTNTYQIYSKNPQNCQEFLGASSVINWKQHLQIQSTQSSLNEVIQNLAAA 120
Query: 553 KFIKVKQTQHILYITPEMAIKLLPSLPETKNLPPGYSRPKASNQEVFQVSSMDVTHAALV 732
+KV Q Q I+Y PE A KLLPSL E KNLP R K NQE+F++SS+DVTHAALV
Sbjct: 121 NLVKVNQQQGIVYTMPERARKLLPSLLEAKNLPLESGRAKTINQEMFKLSSLDVTHAALV 180
Query: 733 NKFWHFGGNERSQRFIGRCIRNFLSICLLGPEGTPISWSLMDQTGEIRMGATLPEYRGQG 912
NKFW+FGGNERSQRFI RCI+ F + CLLGPEGT +SWSLMDQTGEIRMG T+PE+R +G
Sbjct: 181 NKFWYFGGNERSQRFIERCIQTFPTFCLLGPEGTLVSWSLMDQTGEIRMGGTVPEHRARG 240
Query: 913 LISHLLCVHIQALDERGFPTYMHTDKANKTVQKINHKM 1026
L+S+L+ +HI+ALD+ +PTY HT +NK VQK++H +
Sbjct: 241 LVSYLMDIHIRALDKLDYPTYYHTFTSNKPVQKMSHSL 278
>ref|XP_852587.1| PREDICTED: similar to glycine-N-acyltransferase (predicted) [Canis
familiaris].
Length = 273
Score = 155 bits (391), Expect = 8e-38
Identities = 87/238 (36%), Positives = 132/238 (55%), Gaps = 4/238 (1%)
Frame = +1
Query: 271 VYGTVFHMNQGNPFKLKALVDKWPDFNTVVIRPQEQEMTDDFDHHTNTYQIYSKDLKNCH 450
VYG V ++N+GNPF+ + +VD WPDF V+ R Q++ TD+ DH+TN Y ++ KD++
Sbjct: 16 VYGAVMNINRGNPFQKEVVVDSWPDFKAVITRRQKEAETDNLDHYTNAYAVFYKDVRAYQ 75
Query: 451 EALSTSDVINWKQHLQIQSSQPSLDEVIQNLATTKFIKVKQTQ-HILYITPEMAIKLLPS 627
+ L DVINW Q QIQ Q L +V + +A +K + VK T ++ +P +
Sbjct: 76 QLLEERDVINWDQVFQIQGLQSELCDVSKAVANSKQLGVKLTSFKAVHFSPH------ST 129
Query: 628 LPETKNL---PPGYSRPKASNQEVFQVSSMDVTHAALVNKFWHFGGNERSQRFIGRCIRN 798
LP+T +L PP +++ + VT A L+N+ W GGNE+ ++I I
Sbjct: 130 LPDTSSLMSSPP-------------RLTYLSVTDADLLNRTWSRGGNEQCLQYIKNLISC 176
Query: 799 FLSICLLGPEGTPISWSLMDQTGEIRMGATLPEYRGQGLISHLLCVHIQALDERGFPT 972
F S+C+ +G P+SWSL DQ + TLPEYR +G + + L RGFP+
Sbjct: 177 FPSVCVRDVKGNPVSWSLTDQFATMCHSYTLPEYRRKGYSRLVALTLARKLQSRGFPS 234
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 45,131,443
Number of extensions: 1268233
Number of successful extensions: 3667
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 3665
Number of HSP's successfully gapped: 3
Length of query: 346
Length of database: 18,874,504
Length adjustment: 104
Effective length of query: 242
Effective length of database: 15,407,560
Effective search space: 3728629520
Effective search space used: 3728629520
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-003832
(1038 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_964011.2| glycine N-acyltransferase isoform a [Homo sapie... 389 e-108
Alignment gi|NP_005829.3| glycine N-acyltransferase isoform b [Homo sapie... 227 2e-59
Alignment gi|NP_659453.3| glycine N-acyltransferase-like protein 2 [Homo ... 222 4e-58
Alignment gi|NP_001207425.1| glycine N-acyltransferase-like protein 1 iso... 211 9e-55
Alignment gi|NP_001207423.1| glycine N-acyltransferase-like protein 1 iso... 211 9e-55
Alignment gi|NP_542392.2| glycine N-acyltransferase-like protein 1 isofor... 195 7e-50
Alignment gi|NP_001010904.1| glycine N-acyltransferase-like protein 3 [Ho... 174 9e-44
>ref|NP_964011.2| glycine N-acyltransferase isoform a [Homo sapiens].
Length = 296
Score = 389 bits (1000), Expect = e-108
Identities = 187/282 (66%), Positives = 223/282 (79%)
Frame = +1
Query: 193 MLHLQSAQMLLRLEKCLRKSLPESLKVYGTVFHMNQGNPFKLKALVDKWPDFNTVVIRPQ 372
ML LQ AQML LEK LRKSLP SLKVYGTVFH+N GNPF LKA+VDKWPDFNTVV+ PQ
Sbjct: 2 MLPLQGAQMLQMLEKSLRKSLPASLKVYGTVFHINHGNPFNLKAVVDKWPDFNTVVVCPQ 61
Query: 373 EQEMTDDFDHHTNTYQIYSKDLKNCHEALSTSDVINWKQHLQIQSSQPSLDEVIQNLATT 552
EQ+MTDD DH+TNTYQIYSKD +NC E L + ++INWKQHLQIQSSQPSL+E IQNLA
Sbjct: 62 EQDMTDDLDHYTNTYQIYSKDPQNCQEFLGSPELINWKQHLQIQSSQPSLNEAIQNLAAI 121
Query: 553 KFIKVKQTQHILYITPEMAIKLLPSLPETKNLPPGYSRPKASNQEVFQVSSMDVTHAALV 732
K KVKQTQ ILY+ E A +L P L ++K L P +PKA NQE+F++SSMDVTHA LV
Sbjct: 122 KSFKVKQTQRILYMAAETAKELTPFLLKSKILSPNGGKPKAINQEMFKLSSMDVTHAHLV 181
Query: 733 NKFWHFGGNERSQRFIGRCIRNFLSICLLGPEGTPISWSLMDQTGEIRMGATLPEYRGQG 912
NKFWHFGGNERSQRFI RCI+ F + CLLGPEGTP+ W LMDQTGE+RM TLPEYR G
Sbjct: 182 NKFWHFGGNERSQRFIERCIQTFPTCCLLGPEGTPVCWDLMDQTGEMRMAGTLPEYRLHG 241
Query: 913 LISHLLCVHIQALDERGFPTYMHTDKANKTVQKINHKMHPIP 1038
L+++++ H Q L + GFP Y H D +N+ +QK+++ + +P
Sbjct: 242 LVTYVIYSHAQKLGKLGFPVYSHVDYSNEAMQKMSYTLQHVP 283
>ref|NP_005829.3| glycine N-acyltransferase isoform b [Homo sapiens].
Length = 163
Score = 227 bits (578), Expect = 2e-59
Identities = 113/161 (70%), Positives = 128/161 (79%)
Frame = +1
Query: 193 MLHLQSAQMLLRLEKCLRKSLPESLKVYGTVFHMNQGNPFKLKALVDKWPDFNTVVIRPQ 372
ML LQ AQML LEK LRKSLP SLKVYGTVFH+N GNPF LKA+VDKWPDFNTVV+ PQ
Sbjct: 2 MLPLQGAQMLQMLEKSLRKSLPASLKVYGTVFHINHGNPFNLKAVVDKWPDFNTVVVCPQ 61
Query: 373 EQEMTDDFDHHTNTYQIYSKDLKNCHEALSTSDVINWKQHLQIQSSQPSLDEVIQNLATT 552
EQ+MTDD DH+TNTYQIYSKD +NC E L + ++INWKQHLQIQSSQPSL+E IQNLA
Sbjct: 62 EQDMTDDLDHYTNTYQIYSKDPQNCQEFLGSPELINWKQHLQIQSSQPSLNEAIQNLAAI 121
Query: 553 KFIKVKQTQHILYITPEMAIKLLPSLPETKNLPPGYSRPKA 675
K KVKQTQ ILY+ E A +L P L ++K L P +PKA
Sbjct: 122 KSFKVKQTQRILYMAAETAKELTPFLLKSKILSPNGGKPKA 162
>ref|NP_659453.3| glycine N-acyltransferase-like protein 2 [Homo sapiens].
Length = 294
Score = 222 bits (566), Expect = 4e-58
Identities = 121/277 (43%), Positives = 173/277 (62%), Gaps = 1/277 (0%)
Frame = +1
Query: 193 MLHLQSAQMLLRLEKCLRKSLPESLKVYGTVFHMNQGNPFKLKALVDKWPDFNTVVIRPQ 372
ML L ++Q L L K L KS+PES+KVYG +F++ NPF ++ LVD WPD+ V+ RPQ
Sbjct: 1 MLVLHNSQKLQILYKSLEKSIPESIKVYGAIFNIKDKNPFNMEVLVDAWPDYQIVITRPQ 60
Query: 373 EQEMTDDFDHHTNTYQIYSKDLKNCHEALSTSDVINWKQHLQIQSSQPSLDEVIQNLATT 552
+QEM DD DH+TNTY I++K E LS S+VI+W+Q LQIQ Q LDE I+ +AT+
Sbjct: 61 KQEMKDDQDHYTNTYHIFTKAPDKLEEVLSYSNVISWEQTLQIQGCQEGLDEAIRKVATS 120
Query: 553 KFIKVKQTQHILYITPEMAIKLLPSLPETKNLPPGYSRPKASNQEVFQVSSMDVTHAALV 732
K ++V + IL+I PE+ K S + L K N F +D +HA LV
Sbjct: 121 KSVQVDYMKTILFI-PELPKKHKTSSNDKMELFEVDDDNKEGN---FSNMFLDASHAGLV 176
Query: 733 NKFWHFGGNERSQRFIGRCIRNFLSICLLGPEGTPISWSLMDQTGEIRMGATLPEYRGQG 912
N+ W FG NERS ++I RC+++FL +LGPEG +SW +M+Q+ E+RMG T+P+YR QG
Sbjct: 177 NEHWAFGKNERSLKYIERCLQDFLGFGVLGPEGQLVSWIVMEQSCELRMGYTVPKYRHQG 236
Query: 913 LISHLLCVHIQALDERGFPTYMH-TDKANKTVQKINH 1020
+ + + L ++ P Y H D K++Q +N+
Sbjct: 237 NMLQIGYHLEKYLSQKEIPFYFHVADNNEKSLQALNN 273
>ref|NP_001207425.1| glycine N-acyltransferase-like protein 1 isoform 2 [Homo sapiens].
Length = 302
Score = 211 bits (537), Expect = 9e-55
Identities = 108/276 (39%), Positives = 172/276 (62%), Gaps = 7/276 (2%)
Frame = +1
Query: 193 MLHLQSAQMLLRLEKCLRKSLPESLKVYGTVFHMNQGNPFKLKALVDKWPDFNTVVIRPQ 372
M+ L ++ LL L K L +S+PESLKVYG+V+H+N GNPF ++ LVD WP++ V+IRPQ
Sbjct: 1 MILLNNSHKLLALYKSLARSIPESLKVYGSVYHINHGNPFNMEVLVDSWPEYQMVIIRPQ 60
Query: 373 EQEMTDDFDHHTNTYQIYSKDLKNCHEALSTSDVINWKQHLQIQSSQPSLDEVIQNLATT 552
+QEMTDD D +TN Y+++SK+ + E L +++NWKQ LQIQ Q SL E I+ +
Sbjct: 61 KQEMTDDMDSYTNVYRMFSKEPQKSEEVLKNCEIVNWKQRLQIQGLQESLGEGIRVATFS 120
Query: 553 KFIKVKQTQHILYITPEMAIKL-------LPSLPETKNLPPGYSRPKASNQEVFQVSSMD 711
K +KV+ ++ +L +T ++ +KL L S ET + + S F+ + +D
Sbjct: 121 KSVKVEHSRALLLVTEDI-LKLNASSKSKLGSWAETGHPDDEFE----SETPNFKYAQLD 175
Query: 712 VTHAALVNKFWHFGGNERSQRFIGRCIRNFLSICLLGPEGTPISWSLMDQTGEIRMGATL 891
V+++ LVN W G NERS +I RCI + + C+LGPEG P+SW MD + E+ M ++
Sbjct: 176 VSYSGLVNDNWKRGKNERSLHYIKRCIEDLPAACMLGPEGVPVSWVTMDPSCEVGMAYSM 235
Query: 892 PEYRGQGLISHLLCVHIQALDERGFPTYMHTDKANK 999
+YR G ++ ++ +++ L ++ P Y+ + N+
Sbjct: 236 EKYRRTGNMARVMVRYMKYLRQKNIPFYISVLEENE 271
>ref|NP_001207423.1| glycine N-acyltransferase-like protein 1 isoform 2 [Homo sapiens].
Length = 302
Score = 211 bits (537), Expect = 9e-55
Identities = 108/276 (39%), Positives = 172/276 (62%), Gaps = 7/276 (2%)
Frame = +1
Query: 193 MLHLQSAQMLLRLEKCLRKSLPESLKVYGTVFHMNQGNPFKLKALVDKWPDFNTVVIRPQ 372
M+ L ++ LL L K L +S+PESLKVYG+V+H+N GNPF ++ LVD WP++ V+IRPQ
Sbjct: 1 MILLNNSHKLLALYKSLARSIPESLKVYGSVYHINHGNPFNMEVLVDSWPEYQMVIIRPQ 60
Query: 373 EQEMTDDFDHHTNTYQIYSKDLKNCHEALSTSDVINWKQHLQIQSSQPSLDEVIQNLATT 552
+QEMTDD D +TN Y+++SK+ + E L +++NWKQ LQIQ Q SL E I+ +
Sbjct: 61 KQEMTDDMDSYTNVYRMFSKEPQKSEEVLKNCEIVNWKQRLQIQGLQESLGEGIRVATFS 120
Query: 553 KFIKVKQTQHILYITPEMAIKL-------LPSLPETKNLPPGYSRPKASNQEVFQVSSMD 711
K +KV+ ++ +L +T ++ +KL L S ET + + S F+ + +D
Sbjct: 121 KSVKVEHSRALLLVTEDI-LKLNASSKSKLGSWAETGHPDDEFE----SETPNFKYAQLD 175
Query: 712 VTHAALVNKFWHFGGNERSQRFIGRCIRNFLSICLLGPEGTPISWSLMDQTGEIRMGATL 891
V+++ LVN W G NERS +I RCI + + C+LGPEG P+SW MD + E+ M ++
Sbjct: 176 VSYSGLVNDNWKRGKNERSLHYIKRCIEDLPAACMLGPEGVPVSWVTMDPSCEVGMAYSM 235
Query: 892 PEYRGQGLISHLLCVHIQALDERGFPTYMHTDKANK 999
+YR G ++ ++ +++ L ++ P Y+ + N+
Sbjct: 236 EKYRRTGNMARVMVRYMKYLRQKNIPFYISVLEENE 271
>ref|NP_542392.2| glycine N-acyltransferase-like protein 1 isoform 1 [Homo sapiens].
Length = 333
Score = 195 bits (495), Expect = 7e-50
Identities = 103/276 (37%), Positives = 168/276 (60%), Gaps = 9/276 (3%)
Frame = +1
Query: 199 HLQSAQMLLRLEKCLR--KSLPESLKVYGTVFHMNQGNPFKLKALVDKWPDFNTVVIRPQ 372
+LQ + + L + LR + L + LKVYG+V+H+N GNPF ++ LVD WP++ V+IRPQ
Sbjct: 32 YLQDPIVSIDLSEWLRIIEFLLQGLKVYGSVYHINHGNPFNMEVLVDSWPEYQMVIIRPQ 91
Query: 373 EQEMTDDFDHHTNTYQIYSKDLKNCHEALSTSDVINWKQHLQIQSSQPSLDEVIQNLATT 552
+QEMTDD D +TN Y+++SK+ + E L +++NWKQ LQIQ Q SL E I+ +
Sbjct: 92 KQEMTDDMDSYTNVYRMFSKEPQKSEEVLKNCEIVNWKQRLQIQGLQESLGEGIRVATFS 151
Query: 553 KFIKVKQTQHILYITPEMAIKL-------LPSLPETKNLPPGYSRPKASNQEVFQVSSMD 711
K +KV+ ++ +L +T ++ +KL L S ET + + S F+ + +D
Sbjct: 152 KSVKVEHSRALLLVTEDI-LKLNASSKSKLGSWAETGHPDDEFE----SETPNFKYAQLD 206
Query: 712 VTHAALVNKFWHFGGNERSQRFIGRCIRNFLSICLLGPEGTPISWSLMDQTGEIRMGATL 891
V+++ LVN W G NERS +I RCI + + C+LGPEG P+SW MD + E+ M ++
Sbjct: 207 VSYSGLVNDNWKRGKNERSLHYIKRCIEDLPAACMLGPEGVPVSWVTMDPSCEVGMAYSM 266
Query: 892 PEYRGQGLISHLLCVHIQALDERGFPTYMHTDKANK 999
+YR G ++ ++ +++ L ++ P Y+ + N+
Sbjct: 267 EKYRRTGNMARVMVRYMKYLRQKNIPFYISVLEENE 302
>ref|NP_001010904.1| glycine N-acyltransferase-like protein 3 [Homo sapiens].
Length = 288
Score = 174 bits (442), Expect = 9e-44
Identities = 97/261 (37%), Positives = 145/261 (55%), Gaps = 1/261 (0%)
Frame = +1
Query: 193 MLHLQSAQMLLRLEKCLRKSLPESLKVYGTVFHMNQGNPFKLKALVDKWPDFNTVVIRPQ 372
ML L + LL LEK L+ PESLKVYG V ++N+GNPF+ + ++D WPDF V+ R Q
Sbjct: 1 MLVLNCSTKLLILEKMLKSCFPESLKVYGAVMNINRGNPFQKEVVLDSWPDFKAVITRRQ 60
Query: 373 EQEMTDDFDHHTNTYQIYSKDLKNCHEALSTSDVINWKQHLQIQSSQPSLDEVIQNLATT 552
+ TD+ DH+TN Y ++ KD++ + L DV NW Q QIQ Q L +V + +A +
Sbjct: 61 REAETDNLDHYTNAYAVFYKDVRAYRQLLEECDVFNWDQVFQIQGLQSELYDVSKAVANS 120
Query: 553 KFIKVKQTQ-HILYITPEMAIKLLPSLPETKNLPPGYSRPKASNQEVFQVSSMDVTHAAL 729
K + +K T ++ +P + SLP+T L R ++ + V +A L
Sbjct: 121 KQLNIKLTSFKAVHFSP------VSSLPDTSFLKGPSPR----------LTYLSVANADL 164
Query: 730 VNKFWHFGGNERSQRFIGRCIRNFLSICLLGPEGTPISWSLMDQTGEIRMGATLPEYRGQ 909
+N+ W GGNE+ R+I I F S+C+ +G P+SWS+ DQ + G TLPE+R +
Sbjct: 165 LNRTWSRGGNEQCLRYIANLISCFPSVCVRDEKGNPVSWSITDQFATMCHGYTLPEHRRK 224
Query: 910 GLISHLLCVHIQALDERGFPT 972
G + + L RGFP+
Sbjct: 225 GYSRLVALTLARKLQSRGFPS 245
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 44,524,672
Number of extensions: 1261242
Number of successful extensions: 3953
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 3948
Number of HSP's successfully gapped: 7
Length of query: 346
Length of database: 18,297,164
Length adjustment: 103
Effective length of query: 243
Effective length of database: 14,901,872
Effective search space: 3621154896
Effective search space used: 3621154896
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-003832
(1038 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001161379.1| glycine N-acyltransferase-like protein [Mus ... 402 e-112
Alignment gi|NP_001013784.2| glycine N-acyltransferase-like protein [Mus ... 402 e-112
Alignment gi|NP_666047.1| glycine N-acyltransferase [Mus musculus]. 375 e-104
Alignment gi|NP_083826.1| glycine N-acyltransferase-like protein Keg1 [Mu... 354 5e-98
Alignment gi|NP_001138532.1| glycine N-acyltransferase-like protein 3 [Mu... 152 3e-37
>ref|NP_001161379.1| glycine N-acyltransferase-like protein [Mus musculus].
Length = 296
Score = 402 bits (1032), Expect = e-112
Identities = 194/283 (68%), Positives = 231/283 (81%), Gaps = 1/283 (0%)
Frame = +1
Query: 193 MLHLQSAQMLLRLEKCLRKSLPESLKVYGTVFHMNQGNPFKLKALVDKWPDFNTVVIRPQ 372
MLHL+S+QML LE LRK LPESLKVYGTVFHMNQGNPFKLKALVDKWPDFNTVV+RP+
Sbjct: 1 MLHLRSSQMLQMLESSLRKYLPESLKVYGTVFHMNQGNPFKLKALVDKWPDFNTVVVRPR 60
Query: 373 EQEMTDDFDHHTNTYQIYSKDLKNCHEALSTSDVINWKQHLQIQSSQPSLDEVIQNLATT 552
EQEM DD D HTNTYQIYSKD K+C E L T DVINWKQHLQIQSSQ +L+E I +LA
Sbjct: 61 EQEMGDDLDQHTNTYQIYSKDPKHCLEFLGTPDVINWKQHLQIQSSQSNLNEAIMDLAAG 120
Query: 553 KFIKVKQTQHILYITPEMAIKLLPSLPETKN-LPPGYSRPKASNQEVFQVSSMDVTHAAL 729
K +KVK+TQ ILY+ PE A KL+PSL E K L RP+A +QE+F++S++DVTHA L
Sbjct: 121 KMVKVKRTQCILYMMPETAKKLVPSLLEDKEYLDHQSGRPRAIDQEMFKLSTLDVTHAPL 180
Query: 730 VNKFWHFGGNERSQRFIGRCIRNFLSICLLGPEGTPISWSLMDQTGEIRMGATLPEYRGQ 909
V+KFW FGGNERSQRFIGRCI+ F S CLLGPEGTP+SW+LMDQTGEIRM T+P+YR Q
Sbjct: 181 VDKFWQFGGNERSQRFIGRCIQIFPSSCLLGPEGTPVSWALMDQTGEIRMAGTVPDYRAQ 240
Query: 910 GLISHLLCVHIQALDERGFPTYMHTDKANKTVQKINHKMHPIP 1038
GLISH++ A+D+RG+P Y HT++ NK +QK++H +H +P
Sbjct: 241 GLISHIIYAQTLAMDKRGYPVYNHTEQTNKVIQKMSHTLHHVP 283
>ref|NP_001013784.2| glycine N-acyltransferase-like protein [Mus musculus].
Length = 296
Score = 402 bits (1032), Expect = e-112
Identities = 194/283 (68%), Positives = 231/283 (81%), Gaps = 1/283 (0%)
Frame = +1
Query: 193 MLHLQSAQMLLRLEKCLRKSLPESLKVYGTVFHMNQGNPFKLKALVDKWPDFNTVVIRPQ 372
MLHL+S+QML LE LRK LPESLKVYGTVFHMNQGNPFKLKALVDKWPDFNTVV+RP+
Sbjct: 1 MLHLRSSQMLQMLESSLRKYLPESLKVYGTVFHMNQGNPFKLKALVDKWPDFNTVVVRPR 60
Query: 373 EQEMTDDFDHHTNTYQIYSKDLKNCHEALSTSDVINWKQHLQIQSSQPSLDEVIQNLATT 552
EQEM DD D HTNTYQIYSKD K+C E L T DVINWKQHLQIQSSQ +L+E I +LA
Sbjct: 61 EQEMGDDLDQHTNTYQIYSKDPKHCLEFLGTPDVINWKQHLQIQSSQSNLNEAIMDLAAG 120
Query: 553 KFIKVKQTQHILYITPEMAIKLLPSLPETKN-LPPGYSRPKASNQEVFQVSSMDVTHAAL 729
K +KVK+TQ ILY+ PE A KL+PSL E K L RP+A +QE+F++S++DVTHA L
Sbjct: 121 KMVKVKRTQCILYMMPETAKKLVPSLLEDKEYLDHQSGRPRAIDQEMFKLSTLDVTHAPL 180
Query: 730 VNKFWHFGGNERSQRFIGRCIRNFLSICLLGPEGTPISWSLMDQTGEIRMGATLPEYRGQ 909
V+KFW FGGNERSQRFIGRCI+ F S CLLGPEGTP+SW+LMDQTGEIRM T+P+YR Q
Sbjct: 181 VDKFWQFGGNERSQRFIGRCIQIFPSSCLLGPEGTPVSWALMDQTGEIRMAGTVPDYRAQ 240
Query: 910 GLISHLLCVHIQALDERGFPTYMHTDKANKTVQKINHKMHPIP 1038
GLISH++ A+D+RG+P Y HT++ NK +QK++H +H +P
Sbjct: 241 GLISHIIYAQTLAMDKRGYPVYNHTEQTNKVIQKMSHTLHHVP 283
>ref|NP_666047.1| glycine N-acyltransferase [Mus musculus].
Length = 296
Score = 375 bits (963), Expect = e-104
Identities = 179/279 (64%), Positives = 223/279 (79%)
Frame = +1
Query: 202 LQSAQMLLRLEKCLRKSLPESLKVYGTVFHMNQGNPFKLKALVDKWPDFNTVVIRPQEQE 381
LQ AQML LEK LRK LPESLKVYGTV+HM GNPF LKALVDKWPDFNTVV+RPQEQE
Sbjct: 5 LQGAQMLQMLEKSLRKYLPESLKVYGTVYHMIHGNPFNLKALVDKWPDFNTVVVRPQEQE 64
Query: 382 MTDDFDHHTNTYQIYSKDLKNCHEALSTSDVINWKQHLQIQSSQPSLDEVIQNLATTKFI 561
MTDD D + NTYQ+YSKD +NC E L +S+VINWKQHLQIQSSQ L++ IQNLA+ +
Sbjct: 65 MTDDLDFYINTYQVYSKDPQNCQEFLESSEVINWKQHLQIQSSQSHLNKTIQNLASIQSF 124
Query: 562 KVKQTQHILYITPEMAIKLLPSLPETKNLPPGYSRPKASNQEVFQVSSMDVTHAALVNKF 741
++K +++ILY++ E KL PSL +TKNL G +PKA +Q+ F++SS+DV HAALVNKF
Sbjct: 125 QIKHSENILYVSSETIKKLFPSLLDTKNLSTGSGKPKAIDQDKFKLSSLDVVHAALVNKF 184
Query: 742 WHFGGNERSQRFIGRCIRNFLSICLLGPEGTPISWSLMDQTGEIRMGATLPEYRGQGLIS 921
W FGGNERSQRFI RCI+NF S C+LGPEGTP SW+LMDQTGE+RMG T+PEYR QGL+S
Sbjct: 185 WLFGGNERSQRFIERCIKNFPSSCVLGPEGTPASWTLMDQTGEMRMGGTMPEYRLQGLVS 244
Query: 922 HLLCVHIQALDERGFPTYMHTDKANKTVQKINHKMHPIP 1038
++ Q + +RG+P Y HT+K+N +QK+++ + +P
Sbjct: 245 FVVHSQDQIMTKRGYPVYSHTEKSNIAMQKMSYTLQHLP 283
>ref|NP_083826.1| glycine N-acyltransferase-like protein Keg1 [Mus musculus].
Length = 295
Score = 354 bits (909), Expect = 5e-98
Identities = 172/274 (62%), Positives = 208/274 (75%)
Frame = +1
Query: 193 MLHLQSAQMLLRLEKCLRKSLPESLKVYGTVFHMNQGNPFKLKALVDKWPDFNTVVIRPQ 372
M LQS+Q L LE LRK LPESLKVYGTVFH+NQGNPFKLK LVDKWPDFNTVVIRPQ
Sbjct: 1 MFCLQSSQALQVLENSLRKHLPESLKVYGTVFHINQGNPFKLKTLVDKWPDFNTVVIRPQ 60
Query: 373 EQEMTDDFDHHTNTYQIYSKDLKNCHEALSTSDVINWKQHLQIQSSQPSLDEVIQNLATT 552
E++MTDD DH+ NTY +YSKD K+C E L +S+VINWKQHLQIQSSQ L +VI++L T
Sbjct: 61 EEDMTDDLDHYNNTYLVYSKDPKHCQEFLGSSEVINWKQHLQIQSSQSDLGKVIESLGAT 120
Query: 553 KFIKVKQTQHILYITPEMAIKLLPSLPETKNLPPGYSRPKASNQEVFQVSSMDVTHAALV 732
KVK Q LY+ + A KL PSL + KNL ++ +Q++F+ +S+DVTHAALV
Sbjct: 121 NLGKVKHKQCFLYMVCQTAKKLAPSLMDAKNLVVSRNKLTPLDQQLFKFASLDVTHAALV 180
Query: 733 NKFWHFGGNERSQRFIGRCIRNFLSICLLGPEGTPISWSLMDQTGEIRMGATLPEYRGQG 912
N WHFGGNE+SQ+FI RCI F S C++GPEGTP+SW+LMD TGE+RMG TLP+YR Q
Sbjct: 181 NSLWHFGGNEKSQKFIERCIFTFPSFCIMGPEGTPVSWTLMDHTGELRMGGTLPKYRRQS 240
Query: 913 LISHLLCVHIQALDERGFPTYMHTDKANKTVQKI 1014
LI H+ IQ L++ GFP Y H DKAN TVQ++
Sbjct: 241 LIYHVASQQIQTLEKLGFPMYAHVDKANFTVQRM 274
>ref|NP_001138532.1| glycine N-acyltransferase-like protein 3 [Mus musculus].
Length = 290
Score = 152 bits (385), Expect = 3e-37
Identities = 84/262 (32%), Positives = 138/262 (52%), Gaps = 2/262 (0%)
Frame = +1
Query: 193 MLHLQSAQMLLRLEKCLRKSLPESLKVYGTVFHMNQGNPFKLKALVDKWPDFNTVVIRPQ 372
ML L+ + L LE L+ PESLKVYG V ++N+GNPF+ + ++D WP+F ++ R +
Sbjct: 1 MLVLKCSTKLFILENMLKSHFPESLKVYGAVMNINRGNPFQKEVVLDSWPNFKVIITRRE 60
Query: 373 EQEMTDDFDHHTNTYQIYSKDLKNCHEALSTSDVINWKQHLQIQSSQPSLDEVIQNLATT 552
+ TD+ DH+TN Y ++ KD++ + L DVINW Q QIQ Q L + +A
Sbjct: 61 REAETDNLDHYTNAYAVFYKDIRAYQQLLEEHDVINWDQVFQIQGLQSELYAASKAVAKA 120
Query: 553 KFIKVKQTQHILYITPEMAIKLLP--SLPETKNLPPGYSRPKASNQEVFQVSSMDVTHAA 726
+ + + + + A+ P S+P+ L R ++ + V+ A
Sbjct: 121 RLLDLD-----INLASFKAVHFSPVSSVPDHSFLTGPTPR----------LTYLSVSDAD 165
Query: 727 LVNKFWHFGGNERSQRFIGRCIRNFLSICLLGPEGTPISWSLMDQTGEIRMGATLPEYRG 906
L+N+ W GGN++ R++ I F S+C+ +G P+SW + DQ + G TLP++R
Sbjct: 166 LLNRTWSRGGNQQCLRYLANLIACFPSVCVRDEKGNPVSWGITDQFATMCHGYTLPDHRR 225
Query: 907 QGLISHLLCVHIQALDERGFPT 972
+G + + L RGFP+
Sbjct: 226 KGYSRLVALTLARKLQSRGFPS 247
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 37,906,971
Number of extensions: 1068799
Number of successful extensions: 3219
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 3216
Number of HSP's successfully gapped: 5
Length of query: 346
Length of database: 15,617,559
Length adjustment: 102
Effective length of query: 244
Effective length of database: 12,553,887
Effective search space: 3063148428
Effective search space used: 3063148428
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-003832
(1038 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_003122750.2| PREDICTED: glycine N-phenylacetyltransferase... 549 e-157
Alignment gi|XP_003122749.1| PREDICTED: glycine N-acyltransferase-like is... 389 e-108
Alignment gi|XP_003122748.1| PREDICTED: glycine N-acyltransferase-like is... 389 e-108
Alignment gi|XP_003122754.2| PREDICTED: glycine N-acyltransferase-like [S... 267 6e-72
Alignment gi|XP_003122785.2| PREDICTED: glycine N-acyltransferase-like pr... 215 3e-56
Alignment gi|XP_003128486.2| PREDICTED: glycine N-acyltransferase-like pr... 168 4e-42
>ref|XP_003122750.2| PREDICTED: glycine N-phenylacetyltransferase-like isoform 1 [Sus
scrofa].
Length = 298
Score = 549 bits (1415), Expect = e-157
Identities = 270/285 (94%), Positives = 275/285 (96%), Gaps = 3/285 (1%)
Frame = +1
Query: 193 MLHLQSAQMLLRLEKCLRKSLP---ESLKVYGTVFHMNQGNPFKLKALVDKWPDFNTVVI 363
MLHLQSAQMLLRLEK RK LP ++LKVYGTVFHMNQGNPFKLKALVDKWPDFNTVVI
Sbjct: 1 MLHLQSAQMLLRLEKSGRKYLPCPEDNLKVYGTVFHMNQGNPFKLKALVDKWPDFNTVVI 60
Query: 364 RPQEQEMTDDFDHHTNTYQIYSKDLKNCHEALSTSDVINWKQHLQIQSSQPSLDEVIQNL 543
RPQEQEMTDDFDHHTNTYQIYSKDLKNCHEALSTSDVINWKQHLQIQSSQPSLDEVIQNL
Sbjct: 61 RPQEQEMTDDFDHHTNTYQIYSKDLKNCHEALSTSDVINWKQHLQIQSSQPSLDEVIQNL 120
Query: 544 ATTKFIKVKQTQHILYITPEMAIKLLPSLPETKNLPPGYSRPKASNQEVFQVSSMDVTHA 723
ATTKFIKVKQTQ ILYITPEMAIKLLPSLPETKNLPPGYSRPKASNQE+FQVSSMDVTHA
Sbjct: 121 ATTKFIKVKQTQRILYITPEMAIKLLPSLPETKNLPPGYSRPKASNQELFQVSSMDVTHA 180
Query: 724 ALVNKFWHFGGNERSQRFIGRCIRNFLSICLLGPEGTPISWSLMDQTGEIRMGATLPEYR 903
ALVNKFWHFGGNERSQRFI RCIRNFLSICLLGPEGTPISWSLMDQTGEIRMGATLPEYR
Sbjct: 181 ALVNKFWHFGGNERSQRFIERCIRNFLSICLLGPEGTPISWSLMDQTGEIRMGATLPEYR 240
Query: 904 GQGLISHLLCVHIQALDERGFPTYMHTDKANKTVQKINHKMHPIP 1038
GQGLIS+LLCVHIQALDERGFPTYMHTDKANKTVQKINH +H IP
Sbjct: 241 GQGLISNLLCVHIQALDERGFPTYMHTDKANKTVQKINHNLHHIP 285
>ref|XP_003122749.1| PREDICTED: glycine N-acyltransferase-like isoform 2 [Sus scrofa].
Length = 295
Score = 389 bits (998), Expect = e-108
Identities = 191/279 (68%), Positives = 222/279 (79%)
Frame = +1
Query: 193 MLHLQSAQMLLRLEKCLRKSLPESLKVYGTVFHMNQGNPFKLKALVDKWPDFNTVVIRPQ 372
M LQ AQML LE LRKSLP SLKVYGTVFHMNQGNPFKLKALVDKWPDFNTVVIRPQ
Sbjct: 1 MFLLQGAQMLQMLENSLRKSLPTSLKVYGTVFHMNQGNPFKLKALVDKWPDFNTVVIRPQ 60
Query: 373 EQEMTDDFDHHTNTYQIYSKDLKNCHEALSTSDVINWKQHLQIQSSQPSLDEVIQNLATT 552
EQEMTDD DH+TNTY IYSKDLKNC E L +VINWKQHLQIQSSQ SL+EVIQ LA
Sbjct: 61 EQEMTDDLDHYTNTYHIYSKDLKNCEEFLGLPEVINWKQHLQIQSSQSSLNEVIQKLAAA 120
Query: 553 KFIKVKQTQHILYITPEMAIKLLPSLPETKNLPPGYSRPKASNQEVFQVSSMDVTHAALV 732
K V+QT++ILY+T E +L PSL + KNL +PKA +QE FQ+SS++ +HAALV
Sbjct: 121 KSFNVQQTENILYMTLETIKELAPSLLDEKNLSLTDGKPKAIDQEQFQLSSLEPSHAALV 180
Query: 733 NKFWHFGGNERSQRFIGRCIRNFLSICLLGPEGTPISWSLMDQTGEIRMGATLPEYRGQG 912
N+ W FGGNERSQRFI RCIRNF S+CLLGPEGTPI+WSLMDQTGE+RM T EYR QG
Sbjct: 181 NQLWQFGGNERSQRFIERCIRNFPSVCLLGPEGTPIAWSLMDQTGEMRMAGTKLEYRAQG 240
Query: 913 LISHLLCVHIQALDERGFPTYMHTDKANKTVQKINHKMH 1029
L+++++ H Q L + GFP+Y H DK NK +QK++H ++
Sbjct: 241 LVTYVIFSHSQVLTKLGFPSYSHVDKRNKIMQKMSHTLN 279
>ref|XP_003122748.1| PREDICTED: glycine N-acyltransferase-like isoform 1 [Sus scrofa].
Length = 295
Score = 389 bits (998), Expect = e-108
Identities = 191/279 (68%), Positives = 222/279 (79%)
Frame = +1
Query: 193 MLHLQSAQMLLRLEKCLRKSLPESLKVYGTVFHMNQGNPFKLKALVDKWPDFNTVVIRPQ 372
M LQ AQML LE LRKSLP SLKVYGTVFHMNQGNPFKLKALVDKWPDFNTVVIRPQ
Sbjct: 1 MFLLQGAQMLQMLENSLRKSLPTSLKVYGTVFHMNQGNPFKLKALVDKWPDFNTVVIRPQ 60
Query: 373 EQEMTDDFDHHTNTYQIYSKDLKNCHEALSTSDVINWKQHLQIQSSQPSLDEVIQNLATT 552
EQEMTDD DH+TNTY IYSKDLKNC E L +VINWKQHLQIQSSQ SL+EVIQ LA
Sbjct: 61 EQEMTDDLDHYTNTYHIYSKDLKNCEEFLGLPEVINWKQHLQIQSSQSSLNEVIQKLAAA 120
Query: 553 KFIKVKQTQHILYITPEMAIKLLPSLPETKNLPPGYSRPKASNQEVFQVSSMDVTHAALV 732
K V+QT++ILY+T E +L PSL + KNL +PKA +QE FQ+SS++ +HAALV
Sbjct: 121 KSFNVQQTENILYMTLETIKELAPSLLDEKNLSLTDGKPKAIDQEQFQLSSLEPSHAALV 180
Query: 733 NKFWHFGGNERSQRFIGRCIRNFLSICLLGPEGTPISWSLMDQTGEIRMGATLPEYRGQG 912
N+ W FGGNERSQRFI RCIRNF S+CLLGPEGTPI+WSLMDQTGE+RM T EYR QG
Sbjct: 181 NQLWQFGGNERSQRFIERCIRNFPSVCLLGPEGTPIAWSLMDQTGEMRMAGTKLEYRAQG 240
Query: 913 LISHLLCVHIQALDERGFPTYMHTDKANKTVQKINHKMH 1029
L+++++ H Q L + GFP+Y H DK NK +QK++H ++
Sbjct: 241 LVTYVIFSHSQVLTKLGFPSYSHVDKRNKIMQKMSHTLN 279
>ref|XP_003122754.2| PREDICTED: glycine N-acyltransferase-like [Sus scrofa].
Length = 281
Score = 267 bits (683), Expect = 6e-72
Identities = 129/219 (58%), Positives = 165/219 (75%)
Frame = +1
Query: 379 EMTDDFDHHTNTYQIYSKDLKNCHEALSTSDVINWKQHLQIQSSQPSLDEVIQNLATTKF 558
EMTD+ DH+TNTYQ+YSKD K C E L +VINWKQHLQIQS+Q SLD+VI+NLA K
Sbjct: 50 EMTDELDHYTNTYQVYSKDPKKCQEFLGLPEVINWKQHLQIQSTQSSLDDVIKNLAALKL 109
Query: 559 IKVKQTQHILYITPEMAIKLLPSLPETKNLPPGYSRPKASNQEVFQVSSMDVTHAALVNK 738
KVKQTQ +LY+ E+ K+ SL + KN P ++ K+ +Q++ Q+SS+D +HAALVN
Sbjct: 110 GKVKQTQCLLYMVSELGKKMANSLLDAKNPSPNDNKFKSIHQKILQLSSLDPSHAALVNT 169
Query: 739 FWHFGGNERSQRFIGRCIRNFLSICLLGPEGTPISWSLMDQTGEIRMGATLPEYRGQGLI 918
FW+FGGNERSQRFI RCI+ F + CLLGPEGTP+SW LMDQTGE+RM T+P+YR QGLI
Sbjct: 170 FWYFGGNERSQRFIERCIKTFPNWCLLGPEGTPVSWVLMDQTGEMRMAGTMPKYRRQGLI 229
Query: 919 SHLLCVHIQALDERGFPTYMHTDKANKTVQKINHKMHPI 1035
++L + QAL++ GFP Y H D+AN +QK+ M I
Sbjct: 230 TYLSYIQTQALNKLGFPMYSHVDRANHIMQKLALNMKNI 268
>ref|XP_003122785.2| PREDICTED: glycine N-acyltransferase-like protein 2-like [Sus
scrofa].
Length = 321
Score = 215 bits (548), Expect = 3e-56
Identities = 106/281 (37%), Positives = 168/281 (59%), Gaps = 2/281 (0%)
Frame = +1
Query: 178 KVPAKMLHLQSAQMLLRLEKCLRKSLPESLKVYGTVFHMNQGNPFKLKALVDKWPDFNTV 357
+V KM L+ L L + L KSLPES KVYG ++++ NPF L+ LVD WPD+ T+
Sbjct: 17 EVLQKMFVLREPLKLQSLYETLEKSLPESTKVYGAIYNIKNKNPFNLEVLVDAWPDYQTI 76
Query: 358 VIRPQEQEMTDDFDHHTNTYQIYSKDLKNCHEALSTSDVINWKQHLQIQSSQPSLDEVIQ 537
+ RPQ++EM DD D++TNTY I++K + E L+ VINW+Q QIQ Q S+ E I+
Sbjct: 77 ITRPQKEEMKDDLDYYTNTYHIFTKAPEKLEEVLACPQVINWEQAFQIQGCQESVGEAIR 136
Query: 538 NLATTKFIKV--KQTQHILYITPEMAIKLLPSLPETKNLPPGYSRPKASNQEVFQVSSMD 711
++ +K ++V K+T + + + K + + +P + +E F+ +D
Sbjct: 137 KISASKSVQVDYKRTMLFMSVNEKKLKKTIDDKIDLMKVPKMSKEDEDGKKENFRTIFLD 196
Query: 712 VTHAALVNKFWHFGGNERSQRFIGRCIRNFLSICLLGPEGTPISWSLMDQTGEIRMGATL 891
++A LVN+ W FG NERS +++ RC++NF + GPE P+SW +M+Q+ E+RMG T+
Sbjct: 197 ASYAGLVNEHWDFGKNERSLKYVERCLQNFPGFGVWGPEECPVSWVVMEQSCELRMGYTV 256
Query: 892 PEYRGQGLISHLLCVHIQALDERGFPTYMHTDKANKTVQKI 1014
P+YRGQG + + I L + P Y+H + + +QK+
Sbjct: 257 PKYRGQGNMWQIAYHFISYLISKNMPFYLHVAEEKEEIQKL 297
>ref|XP_003128486.2| PREDICTED: glycine N-acyltransferase-like protein 3-like [Sus
scrofa].
Length = 288
Score = 168 bits (426), Expect = 4e-42
Identities = 93/259 (35%), Positives = 142/259 (54%)
Frame = +1
Query: 193 MLHLQSAQMLLRLEKCLRKSLPESLKVYGTVFHMNQGNPFKLKALVDKWPDFNTVVIRPQ 372
ML L + LL LEK LR PESLKVYG V ++N+GNPF+ + ++D WP+F V+ R Q
Sbjct: 1 MLVLNCSTKLLTLEKVLRSHFPESLKVYGAVMNINRGNPFQKEVVLDSWPNFKAVITRRQ 60
Query: 373 EQEMTDDFDHHTNTYQIYSKDLKNCHEALSTSDVINWKQHLQIQSSQPSLDEVIQNLATT 552
++ TD+ DH+TN Y ++ KD++ + L VINW Q QIQ Q L +V + +AT+
Sbjct: 61 KEAETDNLDHYTNAYAVFYKDVRAYQQLLEEQGVINWDQVFQIQGLQSELYDVSKTVATS 120
Query: 553 KFIKVKQTQHILYITPEMAIKLLPSLPETKNLPPGYSRPKASNQEVFQVSSMDVTHAALV 732
K + VK P+++ L S + +L ++S + V A L+
Sbjct: 121 KQLDVKLASFKAAFFPQLSPPLDTSSLMSLSL---------------KLSCLSVADADLL 165
Query: 733 NKFWHFGGNERSQRFIGRCIRNFLSICLLGPEGTPISWSLMDQTGEIRMGATLPEYRGQG 912
N+ W GGNE+ +R+I + I F S+C+ +G P+SWS DQ + G TL E+R +G
Sbjct: 166 NQTWSRGGNEQCRRYIAKLISCFPSVCVRDDKGNPVSWSFTDQFATMCHGYTLTEHRRKG 225
Query: 913 LISHLLCVHIQALDERGFP 969
+ ++ L +G P
Sbjct: 226 YNRLVALTLVRKLQSQGLP 244
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 27,943,724
Number of extensions: 794621
Number of successful extensions: 2386
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 2382
Number of HSP's successfully gapped: 6
Length of query: 346
Length of database: 11,343,932
Length adjustment: 100
Effective length of query: 246
Effective length of database: 8,854,232
Effective search space: 2178141072
Effective search space used: 2178141072
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-003832
(1038 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr02 672 0.0
>Sscrofa_Chr02
|| Length = 162569375
Score = 672 bits (339), Expect = 0.0
Identities = 357/363 (98%)
Strand = Plus / Plus
Query: 676 agtaaccaagaggtgtttcaagtctcatccatggatgttacccacgctgccttggtgaat 735
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12070045 agtaaccaagagttgtttcaagtctcatccatggatgttacccacgctgccttggtgaat 12070104
Query: 736 aagttctggcattttggtggcaacgagaggagccagagattcattgggcgatgtatccgc 795
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 12070105 aagttctggcattttggtggcaacgagaggagccagagattcattgagcgatgtatccgc 12070164
Query: 796 aactttctctccatctgcttgctggggcctgagggcacccctatatcttggtccctgatg 855
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12070165 aactttctctccatctgcttgctggggcctgagggcacccctatatcttggtccctgatg 12070224
Query: 856 gaccagacaggagagatacggatgggggccaccctgcctgagtaccggggccagggtctc 915
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12070225 gaccagacaggagagatacggatgggggccaccctgcctgagtaccggggccagggtctc 12070284
Query: 916 atctcccatttgctgtgtgtccacatccaggctctggatgaacgtggcttccccacatat 975
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12070285 atctccaatttgctgtgtgtccacatccaggctctggatgaacgtggcttccccacatat 12070344
Query: 976 atgcatacagacaaagccaacaaaaccgtacagaaaatcaatcacaaaatgcatcccatc 1035
||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||
Sbjct: 12070345 atgcatacagacaaagccaacaaaaccgtacagaaaatcaatcacaatctgcatcacatc 12070404
Query: 1036 ccc 1038
|||
Sbjct: 12070405 ccc 12070407
Score = 644 bits (325), Expect = 0.0
Identities = 352/360 (97%), Gaps = 2/360 (0%)
Strand = Plus / Plus
Query: 676 agtaaccaagaggtgtttcaagtctcatccatggatgttacccacgctgccttggtgaat 735
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11970514 agtaaccaagagatgtttcaagtctcatccatggatgttacccacgctgccttggtgaat 11970573
Query: 736 aagttctggcattttggtggcaacgagaggagccagagattcattgggcgatgtatccgc 795
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 11970574 aagttctggcattttggtggcaacgagaggagccagagattcattgagcgatgtatccgc 11970633
Query: 796 aactttctctccatctgcttgctggggcctgagggcacccctatatcttggtccctgatg 855
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11970634 aactttctctccatctgcttgctggggcctgagggcacccctatatcttggtccctgatg 11970693
Query: 856 gaccagacaggagagatacggatgggggccaccctgcctgagtaccggggccagggtctc 915
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11970694 gaccagacag--gagatacggatgggggccaccctgcctgagtaccggggccagggtctc 11970751
Query: 916 atctcccatttgctgtgtgtccacatccaggctctggatgaacgtggcttccccacatat 975
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11970752 atcacccatttgctgtgtgtccacatccaggctctggatgaacgtggcttccccacatat 11970811
Query: 976 atgcatacagacaaagccaacaaaaccgtacagaaaatcaatcacaaaatgcatcccatc 1035
||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||
Sbjct: 11970812 atgcatacagacaaagccaacaaaaccgtacagaaaatcaatcacaatctgcatcacatc 11970871
Score = 347 bits (175), Expect = 8e-93
Identities = 175/175 (100%)
Strand = Plus / Plus
Query: 1 gaggcaaggtctttgttaacggctgcaactcagctgtttctggagaaaaattaccagaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12057639 gaggcaaggtctttgttaacggctgcaactcagctgtttctggagaaaaattaccagaac 12057698
Query: 61 acacttgcaagtcctggctgtgtgggccaagacaaaaagaattccacattctggaaaagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12057699 acacttgcaagtcctggctgtgtgggccaagacaaaaagaattccacattctggaaaagt 12057758
Query: 121 ctgctgcttcgcatttggtcctggggatctttctgcacagagacaacttttcagg 175
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12057759 ctgctgcttcgcatttggtcctggggatctttctgcacagagacaacttttcagg 12057813
Score = 333 bits (168), Expect = 1e-88
Identities = 171/172 (99%)
Strand = Plus / Plus
Query: 506 gttcacagcccagcctggacgaggttatacagaatcttgcaaccactaaattcattaagg 565
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12067938 gttcacagcccagcctggacgaggttatacagaatcttgcaaccactaaattcattaagg 12067997
Query: 566 tcaagcaaacacaacacattctctatataacgcctgagatggcaataaaactgcttcctt 625
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12067998 tcaagcaaacacaacgcattctctatataacgcctgagatggcaataaaactgcttcctt 12068057
Query: 626 ccctgccggagacaaagaacttacctcctggatacagcagacccaaagccag 677
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12068058 ccctgccggagacaaagaacttacctcctggatacagcagacccaaagccag 12068109
Score = 262 bits (132), Expect = 3e-67
Identities = 132/132 (100%)
Strand = Plus / Plus
Query: 376 caggagatgacagatgactttgatcaccacaccaatacctaccaaatctattctaaggat 435
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12066664 caggagatgacagatgactttgatcaccacaccaatacctaccaaatctattctaaggat 12066723
Query: 436 ctcaagaactgtcacgaagcccttagcacatcagatgtcatcaactggaagcagcatttg 495
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12066724 ctcaagaactgtcacgaagcccttagcacatcagatgtcatcaactggaagcagcatttg 12066783
Query: 496 cagatccagagt 507
||||||||||||
Sbjct: 12066784 cagatccagagt 12066795
Score = 220 bits (111), Expect = 1e-54
Identities = 111/111 (100%)
Strand = Plus / Plus
Query: 269 aggtttatggcaccgtcttccacatgaaccaaggaaaccccttcaagctaaaggccttgg 328
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12021030 aggtttatggcaccgtcttccacatgaaccaaggaaaccccttcaagctaaaggccttgg 12021089
Query: 329 tggacaagtggcctgattttaatacagtggttattcgccctcaggagcagg 379
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12021090 tggacaagtggcctgattttaatacagtggttattcgccctcaggagcagg 12021140
Score = 220 bits (111), Expect = 1e-54
Identities = 111/111 (100%)
Strand = Plus / Plus
Query: 269 aggtttatggcaccgtcttccacatgaaccaaggaaaccccttcaagctaaaggccttgg 328
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12064723 aggtttatggcaccgtcttccacatgaaccaaggaaaccccttcaagctaaaggccttgg 12064782
Query: 329 tggacaagtggcctgattttaatacagtggttattcgccctcaggagcagg 379
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12064783 tggacaagtggcctgattttaatacagtggttattcgccctcaggagcagg 12064833
Score = 204 bits (103), Expect = 7e-50
Identities = 109/111 (98%)
Strand = Plus / Plus
Query: 269 aggtttatggcaccgtcttccacatgaaccaaggaaaccccttcaagctaaaggccttgg 328
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 11988012 aggtttatggcaccgtcttccacatgaaccagggaaaccccttcaagctaaaggccttgg 11988071
Query: 329 tggacaagtggcctgattttaatacagtggttattcgccctcaggagcagg 379
|||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 11988072 tggacaagtggcctgattttaacacagtggttattcgccctcaggagcagg 11988122
Score = 204 bits (103), Expect = 7e-50
Identities = 109/111 (98%)
Strand = Plus / Minus
Query: 269 aggtttatggcaccgtcttccacatgaaccaaggaaaccccttcaagctaaaggccttgg 328
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 12002553 aggtttatggcaccgtcttccacatgaaccagggaaaccccttcaagctaaaggccttgg 12002494
Query: 329 tggacaagtggcctgattttaatacagtggttattcgccctcaggagcagg 379
|||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 12002493 tggacaagtggcctgattttaacacagtggttattcgccctcaggagcagg 12002443
Score = 198 bits (100), Expect = 4e-48
Identities = 100/100 (100%)
Strand = Plus / Plus
Query: 173 aggctaaggtacctgccaagatgctccacttgcagagtgcccagatgctgctgaggctag 232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12017360 aggctaaggtacctgccaagatgctccacttgcagagtgcccagatgctgctgaggctag 12017419
Query: 233 agaaatgcttgaggaagagccttcccgagtccttaaaggt 272
||||||||||||||||||||||||||||||||||||||||
Sbjct: 12017420 agaaatgcttgaggaagagccttcccgagtccttaaaggt 12017459
Score = 198 bits (100), Expect = 4e-48
Identities = 100/100 (100%)
Strand = Plus / Plus
Query: 173 aggctaaggtacctgccaagatgctccacttgcagagtgcccagatgctgctgaggctag 232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12061060 aggctaaggtacctgccaagatgctccacttgcagagtgcccagatgctgctgaggctag 12061119
Query: 233 agaaatgcttgaggaagagccttcccgagtccttaaaggt 272
||||||||||||||||||||||||||||||||||||||||
Sbjct: 12061120 agaaatgcttgaggaagagccttcccgagtccttaaaggt 12061159
Score = 182 bits (92), Expect = 3e-43
Identities = 197/232 (84%)
Strand = Plus / Plus
Query: 680 accaagaggtgtttcaagtctcatccatggatgttacccacgctgccttggtgaataagt 739
|||||||| ||||||| |||||||| |||| | |||||||||||||||||||| | |
Sbjct: 11993064 accaagagcagtttcaactctcatccctggaaccttcccacgctgccttggtgaatcaat 11993123
Query: 740 tctggcattttggtggcaacgagaggagccagagattcattgggcgatgtatccgcaact 799
| ||||| || |||||||| |||||||||||||||||||| | ||| || ||||| ||||
Sbjct: 11993124 tatggcaattcggtggcaatgagaggagccagagattcatcgagcgctgcatccggaact 11993183
Query: 800 ttctctccatctgcttgctggggcctgagggcacccctatatcttggtccctgatggacc 859
| | |||| ||||| |||| ||||||||||| ||||| ||| ||||||||||||||||||
Sbjct: 11993184 tcccctccgtctgcctgctagggcctgaggggaccccgatagcttggtccctgatggacc 11993243
Query: 860 agacaggagagatacggatgggggccaccctgcctgagtaccggggccaggg 911
||||||||||||| ||||||| | |||| || ||||||||||| ||||||
Sbjct: 11993244 agacaggagagatgcggatggcaggcaccaagcttgagtaccgggcccaggg 11993295
Score = 182 bits (92), Expect = 3e-43
Identities = 197/232 (84%)
Strand = Plus / Minus
Query: 680 accaagaggtgtttcaagtctcatccatggatgttacccacgctgccttggtgaataagt 739
|||||||| ||||||| |||||||| |||| | |||||||||||||||||||| | |
Sbjct: 11997431 accaagagcagtttcaactctcatccctggaaccttcccacgctgccttggtgaatcaat 11997372
Query: 740 tctggcattttggtggcaacgagaggagccagagattcattgggcgatgtatccgcaact 799
| ||||| || |||||||| |||||||||||||||||||| | ||| || ||||| ||||
Sbjct: 11997371 tatggcaattcggtggcaatgagaggagccagagattcatcgagcgctgcatccggaact 11997312
Query: 800 ttctctccatctgcttgctggggcctgagggcacccctatatcttggtccctgatggacc 859
| | |||| ||||| |||| ||||||||||| ||||| ||| ||||||||||||||||||
Sbjct: 11997311 tcccctccgtctgcctgctagggcctgaggggaccccgatagcttggtccctgatggacc 11997252
Query: 860 agacaggagagatacggatgggggccaccctgcctgagtaccggggccaggg 911
||||||||||||| ||||||| | |||| || ||||||||||| ||||||
Sbjct: 11997251 agacaggagagatgcggatggcaggcaccaagcttgagtaccgggcccaggg 11997200
Score = 111 bits (56), Expect = 8e-22
Identities = 110/128 (85%)
Strand = Plus / Plus
Query: 376 caggagatgacagatgactttgatcaccacaccaatacctaccaaatctattctaaggat 435
|||||||||||||| ||| |||||||| |||||||||||||||| ||||| || |||||
Sbjct: 11990910 caggagatgacagacgaccttgatcactacaccaatacctaccacatctactccaaggac 11990969
Query: 436 ctcaagaactgtcacgaagcccttagcacatcagatgtcatcaactggaagcagcatttg 495
|| ||||||||| | ||| |||| || | |||| |||||||||||||| |||||||||
Sbjct: 11990970 ctgaagaactgtgaggaattccttggcttaccagaagtcatcaactggaaacagcatttg 11991029
Query: 496 cagatcca 503
||||||||
Sbjct: 11991030 cagatcca 11991037
Score = 109 bits (55), Expect = 3e-21
Identities = 166/203 (81%)
Strand = Plus / Plus
Query: 716 cccacgctgccttggtgaataagttctggcattttggtggcaacgagaggagccagagat 775
|||||||||| |||||||||| |||||| ||||||||||||| ||||||||||||||||
Sbjct: 12030218 cccacgctgctttggtgaatacattctggtattttggtggcaatgagaggagccagagat 12030277
Query: 776 tcattgggcgatgtatccgcaactttctctccatctgcttgctggggcctgagggcaccc 835
|||| | ||| |||||| | ||| | | | ||| |||||||||||||||| ||||
Sbjct: 12030278 tcatcgagcgctgtatcaagaccttccccaactggtgcctgctggggcctgaggggaccc 12030337
Query: 836 ctatatcttggtccctgatggaccagacaggagagatacggatgggggccaccctgcctg 895
| | || ||| |||||||||||||||||||||||| ||||||| | |||| ||||
Sbjct: 12030338 ccgtgtcctgggtcctgatggaccagacaggagagatgcggatggcaggcaccatgccca 12030397
Query: 896 agtaccggggccagggtctcatc 918
|||||||| | ||||| ||||||
Sbjct: 12030398 agtaccggaggcagggcctcatc 12030420
Score = 109 bits (55), Expect = 3e-21
Identities = 166/203 (81%)
Strand = Plus / Plus
Query: 716 cccacgctgccttggtgaataagttctggcattttggtggcaacgagaggagccagagat 775
|||||||||| |||||||||| |||||| ||||||||||||| ||||||||||||||||
Sbjct: 12219377 cccacgctgctttggtgaatacattctggtattttggtggcaatgagaggagccagagat 12219436
Query: 776 tcattgggcgatgtatccgcaactttctctccatctgcttgctggggcctgagggcaccc 835
|||| | ||| |||||| | ||| | | | ||| |||||||||||||||| ||||
Sbjct: 12219437 tcatcgagcgctgtatcaagaccttccccaactggtgcctgctggggcctgaggggaccc 12219496
Query: 836 ctatatcttggtccctgatggaccagacaggagagatacggatgggggccaccctgcctg 895
| | || ||| |||||||||||||||||||||||| ||||||| | |||| ||||
Sbjct: 12219497 ccgtgtcctgggtcctgatggaccagacaggagagatgcggatggcaggcaccatgccca 12219556
Query: 896 agtaccggggccagggtctcatc 918
|||||||| | ||||| ||||||
Sbjct: 12219557 agtaccggaggcagggcctcatc 12219579
Score = 103 bits (52), Expect = 2e-19
Identities = 109/128 (85%)
Strand = Plus / Minus
Query: 376 caggagatgacagatgactttgatcaccacaccaatacctaccaaatctattctaaggat 435
|||||||||||||| ||| |||||||| |||||||||||||||| ||||| || |||||
Sbjct: 11999649 caggagatgacagacgaccttgatcactacaccaatacctaccacatctactccaaggac 11999590
Query: 436 ctcaagaactgtcacgaagcccttagcacatcagatgtcatcaactggaagcagcatttg 495
|| ||||||||| | ||| |||| || | || | |||||||||||||| |||||||||
Sbjct: 11999589 ctgaagaactgtgaggaattccttggcttaccataagtcatcaactggaaacagcatttg 11999530
Query: 496 cagatcca 503
||||||||
Sbjct: 11999529 cagatcca 11999522
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 33,368,321
Number of extensions: 218
Number of successful extensions: 218
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 214
Number of HSP's successfully gapped: 19
Length of query: 1038
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1017
Effective length of database: 2,808,413,156
Effective search space: 2856156179652
Effective search space used: 2856156179652
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)