Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-004239
(1442 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001069732.1| zinc finger and BTB domain-containing protei... 676 0.0
Alignment gi|XP_001256495.2| PREDICTED: hCG1788238-like, partial [Bos tau... 160 3e-39
Alignment gi|NP_001179093.1| zinc finger and BTB domain-containing protei... 144 1e-34
Alignment gi|XP_002692447.1| PREDICTED: zinc finger and BTB domain contai... 144 1e-34
Alignment gi|XP_002707785.1| PREDICTED: zinc finger and BTB domain contai... 124 2e-28
Alignment gi|XP_590523.4| PREDICTED: zinc finger and BTB domain containin... 124 2e-28
Alignment gi|XP_002692786.1| PREDICTED: zinc finger and BTB domain contai... 123 4e-28
Alignment gi|XP_001253245.2| PREDICTED: zinc finger and BTB domain contai... 123 4e-28
Alignment gi|NP_001030501.1| myoneurin [Bos taurus]. 107 2e-23
Alignment gi|NP_001192536.1| zinc finger and BTB domain-containing protei... 92 9e-19
>ref|NP_001069732.1| zinc finger and BTB domain-containing protein 8A [Bos taurus].
Length = 441
Score = 676 bits (1743), Expect(2) = 0.0
Identities = 331/359 (92%), Positives = 339/359 (94%)
Frame = +3
Query: 276 MEISSHQSHLLQQLNEQRRQDVFCDCNILVEGKVFKAHRNVLFASSGYFKMLLSQTSKET 455
MEISSHQSHLLQQLNEQRRQDVFCDC+ILVEGKVFKAHRNVLFASSGYFKMLLSQ SKET
Sbjct: 1 MEISSHQSHLLQQLNEQRRQDVFCDCSILVEGKVFKAHRNVLFASSGYFKMLLSQNSKET 60
Query: 456 SQPTTATFQAFSPDTFTVILDFVYSGRLSLTGQNVIEVMSAASFLQMTDVISVCKTFIKS 635
SQPTTATFQAFSPDTFTVILDFVYSG+LSLTGQNVIEVMSAASFLQMTDVISVCKTFIKS
Sbjct: 61 SQPTTATFQAFSPDTFTVILDFVYSGKLSLTGQNVIEVMSAASFLQMTDVISVCKTFIKS 120
Query: 636 SLDISEKEKDRYFSLSDKDASSNGIERSSFYSGGWQDESSSPRSHLSPDQGTGIISGKSW 815
SLDISEKEKDRYFSLSDKDA+SNGIERSSFYS GWQDESSSPRSHLSPDQGTGIISGKSW
Sbjct: 121 SLDISEKEKDRYFSLSDKDANSNGIERSSFYSSGWQDESSSPRSHLSPDQGTGIISGKSW 180
Query: 816 SKYNYHPAPQRNTQQPLAKHEQRKESMKKSKHLRLSQPSETTQYKSSKREARTXXXXXXX 995
SKYNYHPA QRNTQQPL KHEQRK+S+KK+KHLRLSQPSE T YKSSKREART
Sbjct: 181 SKYNYHPASQRNTQQPLTKHEQRKDSIKKAKHLRLSQPSEMTHYKSSKREARTSDSSSHA 240
Query: 996 XXXEEQAQMDVEMDSTPVGYQYGQGADVTSRSFPDDLPRMRFKCPYCTHVVKRKADLKRH 1175
EEQAQM+ EMDSTPV YQYGQG+DVTSRSFPDDLPRMRFKCPYCTHVVKRKADLKRH
Sbjct: 241 SQSEEQAQMNAEMDSTPVSYQYGQGSDVTSRSFPDDLPRMRFKCPYCTHVVKRKADLKRH 300
Query: 1176 LRCHTGERPYPCQACGKRFSRLDHLSSHFRTIHQACKLICRKCKRHVTDLTGQVVXEGT 1352
LRCHTGERPYPCQACGKRFSRLDHLSSHFRTIHQACKLICRKCKRHVT LTGQVV EGT
Sbjct: 301 LRCHTGERPYPCQACGKRFSRLDHLSSHFRTIHQACKLICRKCKRHVTGLTGQVVQEGT 359
Score = 56.6 bits (135), Expect(2) = 0.0
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = +2
Query: 1364 LCNECLAEVGIDSLPIDLEAEQHLMS 1441
LCNECLAEVGIDSLPIDLEAEQHLMS
Sbjct: 364 LCNECLAEVGIDSLPIDLEAEQHLMS 389
>ref|XP_001256495.2| PREDICTED: hCG1788238-like, partial [Bos taurus].
Length = 471
Score = 160 bits (404), Expect = 3e-39
Identities = 78/163 (47%), Positives = 116/163 (71%)
Frame = +3
Query: 276 MEISSHQSHLLQQLNEQRRQDVFCDCNILVEGKVFKAHRNVLFASSGYFKMLLSQTSKET 455
ME+ S+ + LL +LNEQR++D FCDC+I+VEG++FKAHRN+LFA+SGYF+ LL +++
Sbjct: 84 MEMQSYYAKLLGELNEQRQRDFFCDCSIIVEGRIFKAHRNILFANSGYFRALLIHYIQDS 143
Query: 456 SQPTTATFQAFSPDTFTVILDFVYSGRLSLTGQNVIEVMSAASFLQMTDVISVCKTFIKS 635
+ +TA+ + D F+ ILDF+YSG+L L G+NVIEVMSAAS+LQM DV++ CKT+I+S
Sbjct: 144 GRHSTASLDIVTSDAFSTILDFLYSGKLDLCGENVIEVMSAASYLQMNDVVNFCKTYIRS 203
Query: 636 SLDISEKEKDRYFSLSDKDASSNGIERSSFYSGGWQDESSSPR 764
SLDI K + + A++ ++ + Q +S SP+
Sbjct: 204 SLDICRKMEKEAAVAAAVAAAAAAAAAAAAAAAAHQMDSGSPK 246
>ref|NP_001179093.1| zinc finger and BTB domain-containing protein 46 [Bos taurus].
Length = 589
Score = 144 bits (364), Expect = 1e-34
Identities = 72/127 (56%), Positives = 89/127 (70%)
Frame = +3
Query: 276 MEISSHQSHLLQQLNEQRRQDVFCDCNILVEGKVFKAHRNVLFASSGYFKMLLSQTSKET 455
MEI+SH HLL++LNEQR+ V CD ++VEGKVFKAH+NVL SS YFK L Q K +
Sbjct: 8 MEIASHYRHLLRELNEQRQHGVLCDVCVVVEGKVFKAHKNVLLGSSRYFKTLYCQVQKTS 67
Query: 456 SQPTTATFQAFSPDTFTVILDFVYSGRLSLTGQNVIEVMSAASFLQMTDVISVCKTFIKS 635
Q T + F I+DF+YS L+LT +NVIEVMSAASFLQMTD++ C FIK+
Sbjct: 68 EQATVTHLDIVTAQGFKAIIDFMYSAHLALTSRNVIEVMSAASFLQMTDIVQACHDFIKA 127
Query: 636 SLDISEK 656
+LDIS K
Sbjct: 128 ALDISIK 134
Score = 80.9 bits (198), Expect = 3e-15
Identities = 31/67 (46%), Positives = 44/67 (65%)
Frame = +3
Query: 1110 RMRFKCPYCTHVVKRKADLKRHLRCHTGERPYPCQACGKRFSRLDHLSSHFRTIHQACKL 1289
R +F+CPYC+ + LKRH+R HTGERPYPC+ CGK+F+R +H+ H + K
Sbjct: 415 RKKFRCPYCSFSAMHQCILKRHMRSHTGERPYPCEICGKKFTRREHMKRHTLVHSKDKKY 474
Query: 1290 ICRKCKR 1310
+C+ C R
Sbjct: 475 VCKLCSR 481
>ref|XP_002692447.1| PREDICTED: zinc finger and BTB domain containing 46-like [Bos
taurus].
Length = 589
Score = 144 bits (364), Expect = 1e-34
Identities = 72/127 (56%), Positives = 89/127 (70%)
Frame = +3
Query: 276 MEISSHQSHLLQQLNEQRRQDVFCDCNILVEGKVFKAHRNVLFASSGYFKMLLSQTSKET 455
MEI+SH HLL++LNEQR+ V CD ++VEGKVFKAH+NVL SS YFK L Q K +
Sbjct: 8 MEIASHYRHLLRELNEQRQHGVLCDVCVVVEGKVFKAHKNVLLGSSRYFKTLYCQVQKTS 67
Query: 456 SQPTTATFQAFSPDTFTVILDFVYSGRLSLTGQNVIEVMSAASFLQMTDVISVCKTFIKS 635
Q T + F I+DF+YS L+LT +NVIEVMSAASFLQMTD++ C FIK+
Sbjct: 68 EQATVTHLDIVTAQGFKAIIDFMYSAHLALTSRNVIEVMSAASFLQMTDIVQACHDFIKA 127
Query: 636 SLDISEK 656
+LDIS K
Sbjct: 128 ALDISIK 134
Score = 80.9 bits (198), Expect = 3e-15
Identities = 31/67 (46%), Positives = 44/67 (65%)
Frame = +3
Query: 1110 RMRFKCPYCTHVVKRKADLKRHLRCHTGERPYPCQACGKRFSRLDHLSSHFRTIHQACKL 1289
R +F+CPYC+ + LKRH+R HTGERPYPC+ CGK+F+R +H+ H + K
Sbjct: 415 RKKFRCPYCSFSAMHQCILKRHMRSHTGERPYPCEICGKKFTRREHMKRHTLVHSKDKKY 474
Query: 1290 ICRKCKR 1310
+C+ C R
Sbjct: 475 VCKLCSR 481
>ref|XP_002707785.1| PREDICTED: zinc finger and BTB domain containing 17-like [Bos
taurus].
Length = 793
Score = 124 bits (311), Expect = 2e-28
Identities = 105/381 (27%), Positives = 163/381 (42%), Gaps = 38/381 (9%)
Frame = +3
Query: 276 MEISSHQSHLLQQLNEQRRQDVFCDCNILVEGKVFKAHRNVLFASSGYFKMLLSQTSKET 455
M+ H H+L+QLN+QR+ + CDC +V+G FKAH+ VL A S YFKML
Sbjct: 1 MDFPQHSQHVLEQLNQQRQLGLLCDCTFVVDGVDFKAHKAVLAACSEYFKMLF------V 54
Query: 456 SQPTTATFQAFSPDTFTVILDFVYSGRLSLTGQNVIEVMSAASFLQMTDVISVC------ 617
Q + +L+F+Y+ +LSL+ +NV +V++ ASFLQM D+I+ C
Sbjct: 55 DQKDVVHLDISNAAGLGQVLEFMYTAKLSLSSENVDDVLAVASFLQMQDIITACHALKSL 114
Query: 618 --------KTFIKSSLDISEK----EKDRYFSLSDKDAS--------------SNGIERS 719
+ S+ ++ +K EK LS+ D + G +
Sbjct: 115 AEPAASPGENMEASAAEVGDKRAKEEKAAATPLSELDPARSSPPTGPGREPKEERGGQAE 174
Query: 720 SFYSGGWQDE-SSSPRS--HLSPDQGTGIISGKSWSKYNYHPAPQRNTQQPLAKHEQRKE 890
S SG Q E + +PR L PD +G+ + ++ + + + Q +P K E+R+E
Sbjct: 175 STGSGAEQTEKADAPREPVELKPDPTSGMAAAEAEAALS-ESSEQEMEVEPARKGEEREE 233
Query: 891 SMKKSKHLRLSQPSETTQYKSSKREARTXXXXXXXXXXEEQAQMD--VEMDSTPVGYQYG 1064
E K E EE A D E+ + G + G
Sbjct: 234 -------------EEGAAPAVVKEEGPPLEKGEAPEESEESASTDSGQELGAEARGLRSG 280
Query: 1065 QGADVT-SRSFPDDLPRMRFKCPYCTHVVKRKADLKRHLRCHTGERPYPCQACGKRFSRL 1241
D T S+++ + KC C + KRH+R HTGE+P+ C+ C K FS
Sbjct: 281 TYGDRTESKAYGSVI----HKCEDCGKEFTHTGNFKRHIRIHTGEKPFSCRECSKAFSDP 336
Query: 1242 DHLSSHFRTIHQACKLICRKC 1304
+H +T C +C
Sbjct: 337 AACKAHEKTHSPLKPYGCEEC 357
Score = 62.8 bits (151), Expect = 7e-10
Identities = 24/52 (46%), Positives = 34/52 (65%)
Frame = +3
Query: 1122 KCPYCTHVVKRKADLKRHLRCHTGERPYPCQACGKRFSRLDHLSSHFRTIHQ 1277
KC C+ DL +H+ HTGE+PY C CG+ F+R+D+L SH +T+HQ
Sbjct: 577 KCSVCSKAFVNVGDLSKHIIIHTGEKPYLCDKCGRGFNRVDNLRSHVKTVHQ 628
Score = 57.4 bits (137), Expect = 3e-08
Identities = 32/94 (34%), Positives = 44/94 (46%), Gaps = 11/94 (11%)
Frame = +3
Query: 1074 DVTSRSFPDDLPRMRF----------KCPYCTHVVKRKADLKRHLRCHTGERPYPCQACG 1223
D RSF D +MR KCP+C + +LK HL+ H + P C+ CG
Sbjct: 411 DYCGRSFSDPTSKMRHLETHDTDKEHKCPHCDKKFNQVGNLKAHLKIHIADGPLKCRECG 470
Query: 1224 KRFSRLDHLSSHFRTIHQACK-LICRKCKRHVTD 1322
K+F+ +L H R IH K +C C+R D
Sbjct: 471 KQFTTSGNLKRHLR-IHSGEKPYVCVHCQRQFAD 503
Score = 52.8 bits (125), Expect = 8e-07
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Frame = +3
Query: 1122 KCPYCTHVVKRKADLKRHLRCHTGERPYPCQACGKRFSRLDHLSSHFR---TIHQACKLI 1292
+C C + + L H+R HTGE+PY C+ CGKRF + L++H R I +
Sbjct: 521 QCVMCGKAFTQASSLIAHVRQHTGEKPYVCERCGKRFVQSSQLANHIRHHDNIRPHKCSV 580
Query: 1293 CRKCKRHVTDLTGQVV 1340
C K +V DL+ ++
Sbjct: 581 CSKAFVNVGDLSKHII 596
Score = 51.2 bits (121), Expect = 2e-06
Identities = 28/68 (41%), Positives = 38/68 (55%), Gaps = 5/68 (7%)
Frame = +3
Query: 1128 PY-CTHVVKRKAD---LKRHLRCHTGERPYPCQACGKRFSRLDHLSSHFRTIHQACKLIC 1295
PY C H ++ AD L+RH+R HTGE+P C CGK F++ L +H R +C
Sbjct: 491 PYVCVHCQRQFADPGALQRHVRIHTGEKPCQCVMCGKAFTQASSLIAHVRQHTGEKPYVC 550
Query: 1296 RKC-KRHV 1316
+C KR V
Sbjct: 551 ERCGKRFV 558
>ref|XP_590523.4| PREDICTED: zinc finger and BTB domain containing 17 [Bos taurus].
Length = 727
Score = 124 bits (311), Expect = 2e-28
Identities = 105/381 (27%), Positives = 163/381 (42%), Gaps = 38/381 (9%)
Frame = +3
Query: 276 MEISSHQSHLLQQLNEQRRQDVFCDCNILVEGKVFKAHRNVLFASSGYFKMLLSQTSKET 455
M+ H H+L+QLN+QR+ + CDC +V+G FKAH+ VL A S YFKML
Sbjct: 1 MDFPQHSQHVLEQLNQQRQLGLLCDCTFVVDGVDFKAHKAVLAACSEYFKMLF------V 54
Query: 456 SQPTTATFQAFSPDTFTVILDFVYSGRLSLTGQNVIEVMSAASFLQMTDVISVC------ 617
Q + +L+F+Y+ +LSL+ +NV +V++ ASFLQM D+I+ C
Sbjct: 55 DQKDVVHLDISNAAGLGQVLEFMYTAKLSLSSENVDDVLAVASFLQMQDIITACHALKSL 114
Query: 618 --------KTFIKSSLDISEK----EKDRYFSLSDKDAS--------------SNGIERS 719
+ S+ ++ +K EK LS+ D + G +
Sbjct: 115 AEPAASPGENMEASAAEVGDKRAKEEKAAATPLSELDPARSSPPTGPGREPKEERGGQAE 174
Query: 720 SFYSGGWQDE-SSSPRS--HLSPDQGTGIISGKSWSKYNYHPAPQRNTQQPLAKHEQRKE 890
S SG Q E + +PR L PD +G+ + ++ + + + Q +P K E+R+E
Sbjct: 175 STGSGAEQTEKADAPREPVELKPDPTSGMAAAEAEAALS-ESSEQEMEVEPARKGEEREE 233
Query: 891 SMKKSKHLRLSQPSETTQYKSSKREARTXXXXXXXXXXEEQAQMD--VEMDSTPVGYQYG 1064
E K E EE A D E+ + G + G
Sbjct: 234 -------------EEGAAPAVVKEEGPPLEKGEAPEESEESASTDSGQELGAEARGLRSG 280
Query: 1065 QGADVT-SRSFPDDLPRMRFKCPYCTHVVKRKADLKRHLRCHTGERPYPCQACGKRFSRL 1241
D T S+++ + KC C + KRH+R HTGE+P+ C+ C K FS
Sbjct: 281 TYGDRTESKAYGSVI----HKCEDCGKEFTHTGNFKRHIRIHTGEKPFSCRECSKAFSDP 336
Query: 1242 DHLSSHFRTIHQACKLICRKC 1304
+H +T C +C
Sbjct: 337 AACKAHEKTHSPLKPYGCEEC 357
Score = 63.2 bits (152), Expect = 6e-10
Identities = 29/80 (36%), Positives = 46/80 (57%)
Frame = +3
Query: 1038 STPVGYQYGQGADVTSRSFPDDLPRMRFKCPYCTHVVKRKADLKRHLRCHTGERPYPCQA 1217
+TP+ ++ Q + + + D R KC C+ DL +H+ HTGE+PY C
Sbjct: 484 ATPLPPRFVQSSQLANHIRHHDNIRPH-KCSVCSKAFVNVGDLSKHIIIHTGEKPYLCDK 542
Query: 1218 CGKRFSRLDHLSSHFRTIHQ 1277
CG+ F+R+D+L SH +T+HQ
Sbjct: 543 CGRGFNRVDNLRSHVKTVHQ 562
>ref|XP_002692786.1| PREDICTED: zinc finger and BTB domain containing 10-like [Bos
taurus].
Length = 909
Score = 123 bits (309), Expect = 4e-28
Identities = 62/127 (48%), Positives = 90/127 (70%), Gaps = 1/127 (0%)
Frame = +3
Query: 285 SSHQSHLLQQLNEQRRQDVFCDCNILVEGKVFKAHRNVLFASSGYFKMLLSQTSKET-SQ 461
+S+ LL+QLNEQR++ + CD +I+V GK+FKAH+N+L A S +FK L ++KE+ +Q
Sbjct: 382 NSYCYQLLRQLNEQRKKGILCDVSIVVSGKIFKAHKNILVAGSRFFKTLYCFSNKESPNQ 441
Query: 462 PTTATFQAFSPDTFTVILDFVYSGRLSLTGQNVIEVMSAASFLQMTDVISVCKTFIKSSL 641
T + F+VILDF+YSG L LT QN IEVM+ AS+LQM++V+ C+ FIK +L
Sbjct: 442 NNTTHLDIAAVQGFSVILDFLYSGNLVLTSQNAIEVMTVASYLQMSEVVQTCRNFIKDAL 501
Query: 642 DISEKEK 662
+IS K +
Sbjct: 502 NISIKSE 508
Score = 64.3 bits (155), Expect = 3e-10
Identities = 27/65 (41%), Positives = 38/65 (58%)
Frame = +3
Query: 1116 RFKCPYCTHVVKRKADLKRHLRCHTGERPYPCQACGKRFSRLDHLSSHFRTIHQACKLIC 1295
+ KCP+C++V K + LKRHL HTG R + C CGK F+R +H+ H + K C
Sbjct: 759 KLKCPHCSYVAKYRRTLKRHLLIHTGVRSFSCDICGKLFTRREHVKRHSLVHKKDKKYKC 818
Query: 1296 RKCKR 1310
CK+
Sbjct: 819 MVCKK 823
>ref|XP_001253245.2| PREDICTED: zinc finger and BTB domain containing 10 [Bos taurus].
Length = 975
Score = 123 bits (309), Expect = 4e-28
Identities = 62/127 (48%), Positives = 90/127 (70%), Gaps = 1/127 (0%)
Frame = +3
Query: 285 SSHQSHLLQQLNEQRRQDVFCDCNILVEGKVFKAHRNVLFASSGYFKMLLSQTSKET-SQ 461
+S+ LL+QLNEQR++ + CD +I+V GK+FKAH+N+L A S +FK L ++KE+ +Q
Sbjct: 448 NSYCYQLLRQLNEQRKKGILCDVSIVVSGKIFKAHKNILVAGSRFFKTLYCFSNKESPNQ 507
Query: 462 PTTATFQAFSPDTFTVILDFVYSGRLSLTGQNVIEVMSAASFLQMTDVISVCKTFIKSSL 641
T + F+VILDF+YSG L LT QN IEVM+ AS+LQM++V+ C+ FIK +L
Sbjct: 508 NNTTHLDIAAVQGFSVILDFLYSGNLVLTSQNAIEVMTVASYLQMSEVVQTCRNFIKDAL 567
Query: 642 DISEKEK 662
+IS K +
Sbjct: 568 NISIKSE 574
Score = 64.3 bits (155), Expect = 3e-10
Identities = 27/65 (41%), Positives = 38/65 (58%)
Frame = +3
Query: 1116 RFKCPYCTHVVKRKADLKRHLRCHTGERPYPCQACGKRFSRLDHLSSHFRTIHQACKLIC 1295
+ KCP+C++V K + LKRHL HTG R + C CGK F+R +H+ H + K C
Sbjct: 825 KLKCPHCSYVAKYRRTLKRHLLIHTGVRSFSCDICGKLFTRREHVKRHSLVHKKDKKYKC 884
Query: 1296 RKCKR 1310
CK+
Sbjct: 885 MVCKK 889
>ref|NP_001030501.1| myoneurin [Bos taurus].
Length = 581
Score = 107 bits (268), Expect = 2e-23
Identities = 101/405 (24%), Positives = 162/405 (40%), Gaps = 60/405 (14%)
Frame = +3
Query: 276 MEISSHQSHLLQQLNEQRRQDVFCDCNILVEGKVFKAHRNVLFASSGYFKMLLSQTSKET 455
M+ S H HLL++LN+QR CDC I++ FKAHRNVL + S YF + TS+
Sbjct: 1 MQYSHHCEHLLERLNKQREAGFLCDCTIVIGEFQFKAHRNVLASFSEYFGAIYRSTSENN 60
Query: 456 SQPTTATFQAFSPDTFTVILDFVYSGRLSLTGQNVIEVMSAASFLQMTDVISVCKTFIKS 635
+ +A D F +L+F+Y+G L+L NV E+ AA +L++ +V++ CK IK
Sbjct: 61 VFLDQSQVKA---DGFQKLLEFIYTGTLNLDSWNVKEIHQAADYLKVEEVVTKCK--IK- 114
Query: 636 SLDISEKEKDRYFSLSDKDASSNGIERSSFYSGGWQDESSSPRSHLSPDQGTGIISGKSW 815
+E +F + E SS ++ +Q T +++ + +
Sbjct: 115 ------------------------MEDFAFIANPSSTEISSITGNIELNQQTCLLTLRDY 150
Query: 816 SKYNYHPAP----QRNTQQ-PLAKHEQRKESMKKSKHLRLSQPSETTQYKSSKREARTXX 980
+ Q N +Q LAK + + KK+ + + + ++T QY S E +
Sbjct: 151 NSREKSEVSTDLVQANPKQGALAKKSSQTKKKKKAFNSQKTGQNKTVQYPSDILENASV- 209
Query: 981 XXXXXXXXEEQAQMDVEMDSTPVGYQYGQGAD-------VTSRSFPDD-------LPRMR 1118
+ +D STP+ Q Q ++ V +FP + R R
Sbjct: 210 ----------ELFLDANKLSTPIIEQVAQRSNSELELTSVVENTFPAQDIVQTVTVKRKR 259
Query: 1119 FK-----------------------------------------CPYCTHVVKRKADLKRH 1175
K C C V + L+RH
Sbjct: 260 GKSQPNCALKEHSMSNIASVKNSYELESSGEELDQRYSKAKPMCNTCGKVFSEASSLRRH 319
Query: 1176 LRCHTGERPYPCQACGKRFSRLDHLSSHFRTIHQACKLICRKCKR 1310
+R H G +PY C CGK F++ + L +H RT C C +
Sbjct: 320 MRIHKGVKPYVCHLCGKAFTQCNQLKTHVRTHTGEKPYKCELCDK 364
Score = 50.8 bits (120), Expect = 3e-06
Identities = 22/62 (35%), Positives = 32/62 (51%)
Frame = +3
Query: 1119 FKCPYCTHVVKRKADLKRHLRCHTGERPYPCQACGKRFSRLDHLSSHFRTIHQACKLICR 1298
+KC C ++LK H R H+GE+PY C CG+RF++ L+ H R +C
Sbjct: 386 YKCDVCNLQFATSSNLKIHARKHSGEKPYVCDRCGQRFAQASTLTYHVRRHTGEKPYVCD 445
Query: 1299 KC 1304
C
Sbjct: 446 TC 447
Score = 50.1 bits (118), Expect = 5e-06
Identities = 24/69 (34%), Positives = 32/69 (46%)
Frame = +3
Query: 1119 FKCPYCTHVVKRKADLKRHLRCHTGERPYPCQACGKRFSRLDHLSSHFRTIHQACKLICR 1298
+ C C + + L H+R HTGE+PY C CGK F+ L +H R IC
Sbjct: 414 YVCDRCGQRFAQASTLTYHVRRHTGEKPYVCDTCGKAFAVSSSLITHSRKHTGERPFICE 473
Query: 1299 KCKRHVTDL 1325
C TD+
Sbjct: 474 LCGNSYTDI 482
>ref|NP_001192536.1| zinc finger and BTB domain-containing protein 49 [Bos taurus].
Length = 765
Score = 92.4 bits (228), Expect = 9e-19
Identities = 48/119 (40%), Positives = 73/119 (61%)
Frame = +3
Query: 282 ISSHQSHLLQQLNEQRRQDVFCDCNILVEGKVFKAHRNVLFASSGYFKMLLSQTSKETSQ 461
+++H HLLQQL+EQR Q + CDC ++V+G FKAH+NVL A S YF+ L +S + +
Sbjct: 4 VAAHSCHLLQQLHEQRIQGLLCDCMLVVKGVCFKAHKNVLAAFSQYFRSLFQNSSGQKND 63
Query: 462 PTTATFQAFSPDTFTVILDFVYSGRLSLTGQNVIEVMSAASFLQMTDVISVCKTFIKSS 638
+ S ILDF+Y+ L L N+ ++ A LQ+ +V+S+C TF+KS+
Sbjct: 64 VFHLDIKNVS--GIGQILDFMYTSHLDLNQDNIQVMLDTAQCLQVQNVLSLCHTFLKSA 120
Score = 55.8 bits (133), Expect = 9e-08
Identities = 42/173 (24%), Positives = 69/173 (39%), Gaps = 21/173 (12%)
Frame = +3
Query: 849 NTQQPLAKH--EQRKESMKKSKHLRLSQPSETTQYKSSKREARTXXXXXXXXXXEEQAQM 1022
N P + H +Q M+ K + L + + KS+++ + E +
Sbjct: 284 NAPDPASDHAGQQPTRQMRLKKAIHLKKLNFLKSQKSAEQTSEPKPNDSLTMRLEAAREH 343
Query: 1023 DVEMDSTPVGYQYGQGADVTSRSF--------PDD---------LPRMR--FKCPYCTHV 1145
VE ++P + S +F P+D LP+ + + C C
Sbjct: 344 SVEKVNSPSAEEKESEELSNSENFNGVSETERPEDPAALEDQTQLPQSQRQYACELCGKP 403
Query: 1146 VKRKADLKRHLRCHTGERPYPCQACGKRFSRLDHLSSHFRTIHQACKLICRKC 1304
K ++L+ H R HTGE+P+ C CGK FS+ +L +H R IC C
Sbjct: 404 FKHPSNLELHRRSHTGEKPFECNICGKHFSQAGNLQTHLRRHSGEKPYICEIC 456
Score = 53.5 bits (127), Expect = 5e-07
Identities = 35/125 (28%), Positives = 58/125 (46%), Gaps = 1/125 (0%)
Frame = +3
Query: 1005 EEQAQMDVEMDSTPVGYQYGQGADVTSRSFPDDLPRMRFKCPYCTHVVKRKADLKRHLRC 1184
+ Q Q E+ P +++ ++ RS + P F+C C + +L+ HLR
Sbjct: 390 QSQRQYACELCGKP--FKHPSNLELHRRSHTGEKP---FECNICGKHFSQAGNLQTHLRR 444
Query: 1185 HTGERPYPCQACGKRFSRLDHLSSHFRTIHQACK-LICRKCKRHVTDLTGQVVXEGTGAT 1361
H+GE+PY C+ CGKRF+ + H IH K +C C R ++ + + T
Sbjct: 445 HSGEKPYICEICGKRFAASGDVQRHI-IIHSGEKPHLCDICGRGFSNFSNLKEHKKTHTA 503
Query: 1362 DSVMS 1376
D V +
Sbjct: 504 DKVFT 508
Score = 49.7 bits (117), Expect = 7e-06
Identities = 21/50 (42%), Positives = 27/50 (54%)
Frame = +3
Query: 1119 FKCPYCTHVVKRKADLKRHLRCHTGERPYPCQACGKRFSRLDHLSSHFRT 1268
+ C C DL+RH+R HTGE+PY C C K F+R L H +T
Sbjct: 535 YSCSACGKCFGGSGDLRRHVRTHTGEKPYTCDVCNKCFTRSAVLRRHKKT 584
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 50,581,181
Number of extensions: 1301811
Number of successful extensions: 12174
Number of sequences better than 1.0e-05: 795
Number of HSP's gapped: 11299
Number of HSP's successfully gapped: 2637
Length of query: 480
Length of database: 17,681,374
Length adjustment: 106
Effective length of query: 374
Effective length of database: 14,174,046
Effective search space: 5301093204
Effective search space used: 5301093204
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-004239
(1442 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_544430.2| PREDICTED: similar to zinc finger and BTB domai... 662 0.0
Alignment gi|XP_544432.2| PREDICTED: similar to zinc finger and BTB domai... 158 1e-38
Alignment gi|XP_543105.2| PREDICTED: similar to BTB (POZ) domain containi... 145 1e-34
Alignment gi|XP_853507.1| PREDICTED: similar to zinc finger and BTB domai... 123 4e-28
Alignment gi|XP_848760.1| PREDICTED: similar to Zinc finger and BTB domai... 114 2e-25
Alignment gi|XP_537319.2| PREDICTED: similar to zinc finger protein 161 h... 104 2e-22
Alignment gi|XP_855835.1| PREDICTED: similar to BTB (POZ) domain containi... 92 2e-18
Alignment gi|XP_545944.2| PREDICTED: similar to zinc finger protein 509 [... 92 2e-18
Alignment gi|XP_547497.2| PREDICTED: similar to zinc finger protein 238 i... 90 5e-18
Alignment gi|XP_855026.1| PREDICTED: similar to zinc finger and BTB domai... 87 5e-17
>ref|XP_544430.2| PREDICTED: similar to zinc finger and BTB domain containing 8 [Canis
familiaris].
Length = 517
Score = 662 bits (1708), Expect(2) = 0.0
Identities = 326/359 (90%), Positives = 334/359 (93%)
Frame = +3
Query: 276 MEISSHQSHLLQQLNEQRRQDVFCDCNILVEGKVFKAHRNVLFASSGYFKMLLSQTSKET 455
MEISSHQSHLLQQLNEQRRQDVFCDC+ILVEGKVFKAHRNVLFASSGYFKMLLSQ SKET
Sbjct: 78 MEISSHQSHLLQQLNEQRRQDVFCDCSILVEGKVFKAHRNVLFASSGYFKMLLSQNSKET 137
Query: 456 SQPTTATFQAFSPDTFTVILDFVYSGRLSLTGQNVIEVMSAASFLQMTDVISVCKTFIKS 635
SQPTTATFQAFSPDTFTVILDFVYSG+LSLTGQNVIEVMSAASFLQMTDVISVCKTFIKS
Sbjct: 138 SQPTTATFQAFSPDTFTVILDFVYSGKLSLTGQNVIEVMSAASFLQMTDVISVCKTFIKS 197
Query: 636 SLDISEKEKDRYFSLSDKDASSNGIERSSFYSGGWQDESSSPRSHLSPDQGTGIISGKSW 815
SLDISEKEKDRYFSLSDKDA+SNGIERSSFYS GWQ E SSP SHLS DQGTGIISGKSW
Sbjct: 198 SLDISEKEKDRYFSLSDKDANSNGIERSSFYSSGWQ-EGSSPHSHLSSDQGTGIISGKSW 256
Query: 816 SKYNYHPAPQRNTQQPLAKHEQRKESMKKSKHLRLSQPSETTQYKSSKREARTXXXXXXX 995
SKYNYHPAPQRNTQQPLAKHEQRK+S+KKSKHLRLSQPSE YK SKREAR
Sbjct: 257 SKYNYHPAPQRNTQQPLAKHEQRKDSIKKSKHLRLSQPSEVAHYKPSKREARASDSSSHI 316
Query: 996 XXXEEQAQMDVEMDSTPVGYQYGQGADVTSRSFPDDLPRMRFKCPYCTHVVKRKADLKRH 1175
EEQAQ+D +MDSTPVGY YG G+DVTSRSFPDDLPRMRFKCPYCTHVVKRKADLKRH
Sbjct: 317 SQSEEQAQIDADMDSTPVGYPYGPGSDVTSRSFPDDLPRMRFKCPYCTHVVKRKADLKRH 376
Query: 1176 LRCHTGERPYPCQACGKRFSRLDHLSSHFRTIHQACKLICRKCKRHVTDLTGQVVXEGT 1352
LRCHTGERPYPCQACGKRFSRLDHLSSHFRTIHQACKLICRKCKRHVTDLTGQVV EGT
Sbjct: 377 LRCHTGERPYPCQACGKRFSRLDHLSSHFRTIHQACKLICRKCKRHVTDLTGQVVQEGT 435
Score = 56.6 bits (135), Expect(2) = 0.0
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = +2
Query: 1364 LCNECLAEVGIDSLPIDLEAEQHLMS 1441
LCNECLAEVGIDSLPIDLEAEQHLMS
Sbjct: 440 LCNECLAEVGIDSLPIDLEAEQHLMS 465
>ref|XP_544432.2| PREDICTED: similar to zinc finger and BTB domain containing 8
[Canis familiaris].
Length = 495
Score = 158 bits (400), Expect = 1e-38
Identities = 74/127 (58%), Positives = 101/127 (79%)
Frame = +3
Query: 276 MEISSHQSHLLQQLNEQRRQDVFCDCNILVEGKVFKAHRNVLFASSGYFKMLLSQTSKET 455
ME+ S+ LL +LNEQR++D FCDC+I+VEG+VFKAHRN+LFA+SGYF+ LL +++
Sbjct: 1 MEMQSYYGKLLGELNEQRKRDFFCDCSIIVEGRVFKAHRNILFANSGYFRALLIHYIQDS 60
Query: 456 SQPTTATFQAFSPDTFTVILDFVYSGRLSLTGQNVIEVMSAASFLQMTDVISVCKTFIKS 635
+ +TA+ + D F+ ILDF+YSG+L L G+NVIEVMSAAS+LQM DV++ CKT+I+S
Sbjct: 61 GRHSTASLDIVTSDAFSTILDFLYSGKLDLCGENVIEVMSAASYLQMNDVVNFCKTYIRS 120
Query: 636 SLDISEK 656
SLDI K
Sbjct: 121 SLDICRK 127
Score = 90.5 bits (223), Expect = 4e-18
Identities = 38/78 (48%), Positives = 54/78 (69%), Gaps = 1/78 (1%)
Frame = +3
Query: 1104 LPRMRFKCPYCTHVVKRKADLKRHLRCHTGERPYPCQACGKRFSRLDHLSSHFRTIHQAC 1283
+P KCP+C + K+K LKRH+R HTGERPYPC+ CGKRF+R +HL SH ++H++
Sbjct: 336 VPIKLHKCPFCPYTAKQKGILKRHIRSHTGERPYPCETCGKRFTRQEHLRSHALSVHRSN 395
Query: 1284 K-LICRKCKRHVTDLTGQ 1334
+ +IC+ C+R T Q
Sbjct: 396 RPIICKGCRRTFTSHLSQ 413
>ref|XP_543105.2| PREDICTED: similar to BTB (POZ) domain containing 4 [Canis
familiaris].
Length = 586
Score = 145 bits (365), Expect = 1e-34
Identities = 87/197 (44%), Positives = 114/197 (57%), Gaps = 10/197 (5%)
Frame = +3
Query: 276 MEISSHQSHLLQQLNEQRRQDVFCDCNILVEGKVFKAHRNVLFASSGYFKMLLSQTSKET 455
MEI+SH HLL++LNEQR+ V CD ++VEGKVFKAH+NVL SS YFK L Q K +
Sbjct: 26 MEIASHYRHLLRELNEQRQHGVLCDVCVVVEGKVFKAHKNVLLGSSRYFKTLYCQVQKTS 85
Query: 456 SQPTTATFQAFSPDTFTVILDFVYSGRLSLTGQNVIEVMSAASFLQMTDVISVCKTFIKS 635
Q T + F I+DF+YS L+LT +NVIEVMSAASFLQMTD++ C FIK+
Sbjct: 86 DQATVTHLDIVTAQGFKAIIDFMYSAHLALTSRNVIEVMSAASFLQMTDIVQACHDFIKA 145
Query: 636 SLDISEK----EKDRYFSLSDKDASSNGIERSSFYSG----GWQDESSSPRSHLSPDQGT 791
+LDIS K ++ F +S SS S+ +G W +SP ++ S D
Sbjct: 146 ALDISIKPDASDELSEFEISAPPGSSTDALISAVMAGRSISPWLARRTSP-ANSSGDSAI 204
Query: 792 GII--SGKSWSKYNYHP 836
G S+ K + P
Sbjct: 205 ASCHEGGSSYGKEDQEP 221
>ref|XP_853507.1| PREDICTED: similar to zinc finger and BTB domain containing 10
[Canis familiaris].
Length = 658
Score = 123 bits (309), Expect = 4e-28
Identities = 62/127 (48%), Positives = 90/127 (70%), Gaps = 1/127 (0%)
Frame = +3
Query: 285 SSHQSHLLQQLNEQRRQDVFCDCNILVEGKVFKAHRNVLFASSGYFKMLLSQTSKET-SQ 461
+S+ LL+QLNEQR++ + CD +I+V GK+FKAH+N+L A S +FK L ++KE+ +Q
Sbjct: 132 NSYCYQLLRQLNEQRKKGILCDVSIVVSGKIFKAHKNILVAGSRFFKTLYCFSNKESPNQ 191
Query: 462 PTTATFQAFSPDTFTVILDFVYSGRLSLTGQNVIEVMSAASFLQMTDVISVCKTFIKSSL 641
T + F+VILDF+YSG L LT QN IEVM+ AS+LQM++V+ C+ FIK +L
Sbjct: 192 NNTTHLDIAAVQGFSVILDFLYSGNLVLTSQNAIEVMTVASYLQMSEVVQTCRNFIKDAL 251
Query: 642 DISEKEK 662
+IS K +
Sbjct: 252 NISIKSE 258
Score = 64.3 bits (155), Expect = 3e-10
Identities = 27/65 (41%), Positives = 38/65 (58%)
Frame = +3
Query: 1116 RFKCPYCTHVVKRKADLKRHLRCHTGERPYPCQACGKRFSRLDHLSSHFRTIHQACKLIC 1295
+ KCP+C++V K + LKRHL HTG R + C CGK F+R +H+ H + K C
Sbjct: 508 KLKCPHCSYVAKYRRTLKRHLLIHTGVRSFSCDICGKLFTRREHVKRHSLVHKKDKKYKC 567
Query: 1296 RKCKR 1310
CK+
Sbjct: 568 MVCKK 572
>ref|XP_848760.1| PREDICTED: similar to Zinc finger and BTB domain containing protein
17 (Zinc finger protein 151) (Myc-interacting zinc finger
protein) (Miz-1 protein) [Canis familiaris].
Length = 470
Score = 114 bits (285), Expect = 2e-25
Identities = 102/383 (26%), Positives = 160/383 (41%), Gaps = 40/383 (10%)
Frame = +3
Query: 276 MEISSHQSHLLQQLNEQRRQDVFCDCNILVEGKVFKAHRNVLFASSGYFKMLLSQTSKET 455
M+ H +L+QLN+QR+ + CDC +V+G FKAH+ VL A S YFKML
Sbjct: 1 MDFPQHSQQVLEQLNQQRQLGLLCDCTFVVDGVDFKAHKAVLAACSEYFKMLF------V 54
Query: 456 SQPTTATFQAFSPDTFTVILDFVYSGRLSLTGQNVIEVMSAASFLQMTDVISVC------ 617
Q + +L+F+Y+ +LSL+ +NV +V++ ASFLQM D+I+ C
Sbjct: 55 DQKDVVHLDISNAAGLGQVLEFMYTAKLSLSSENVDDVLAVASFLQMQDIITACHALKSL 114
Query: 618 --------KTFIKSSLDISEK----EKDRYFSLSDKD-ASSN-------------GIERS 719
+ + S+++ +K EK LS+ D A SN G +
Sbjct: 115 AEPAASPGENTVASAVEGGDKRAKEEKAAATMLSELDPAGSNPPPGPGREPKEERGGQAE 174
Query: 720 SFYSGGWQDESSS-----PRSHLSPDQGTGIISGKSWSKYNYHPAPQRNTQQPLAKHEQR 884
S SG Q E + P PD + + + ++ A +++Q + R
Sbjct: 175 STASGAEQTEKADAPREPPPVEPKPDPTSSMAAAEA------EGALSESSEQEMEVEPAR 228
Query: 885 KESMKKSKHLRLSQPSETTQYKSSKREARTXXXXXXXXXXEEQAQMD--VEMDSTPVGYQ 1058
K +++ E K E EE A D E+ + G +
Sbjct: 229 KGEVRE---------DEGAGAAEVKEEGPPLEKGEAPEESEESASTDSGQELGAEARGLR 279
Query: 1059 YGQGADVT-SRSFPDDLPRMRFKCPYCTHVVKRKADLKRHLRCHTGERPYPCQACGKRFS 1235
G D T S+++ + KC C + KRH+R HTGE+P+ C+ C K FS
Sbjct: 280 SGTYGDRTESKAYGSVI----HKCEDCGKEFTHTGNFKRHIRIHTGEKPFSCRECSKAFS 335
Query: 1236 RLDHLSSHFRTIHQACKLICRKC 1304
+H +T C +C
Sbjct: 336 DPAACKAHEKTHSPLKPYGCEEC 358
Score = 49.3 bits (116), Expect = 9e-06
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 8/76 (10%)
Frame = +3
Query: 1116 RFKCPYCTHVVKRKADLKRHLRCHTGERPYPCQACGKRF----SRLDHLSSHFRTIHQAC 1283
R++C C + +LKRH H+GE+PY C CG+ F S++ HL +H C
Sbjct: 380 RYRCEDCGKLFTTSGNLKRHQLVHSGEKPYQCDYCGRSFSDPTSKMRHLETHDTDKEHKC 439
Query: 1284 ----KLICRKCKRHVT 1319
K + C R T
Sbjct: 440 PHCDKKFNQVCSRQAT 455
>ref|XP_537319.2| PREDICTED: similar to zinc finger protein 161 homolog [Canis
familiaris].
Length = 449
Score = 104 bits (259), Expect = 2e-22
Identities = 96/368 (26%), Positives = 153/368 (41%), Gaps = 28/368 (7%)
Frame = +3
Query: 291 HQSHLLQQLNEQRRQDVFCDCNILVEGKVFKAHRNVLFASSGYFKMLLSQTSKETSQPTT 470
H++ L+ LNEQR + FCD I+VE F+AHR VL A S YFK L + ++S
Sbjct: 18 HKTLFLKTLNEQRLEGEFCDIAIVVEDVKFRAHRCVLAACSTYFKKLFKKLEVDSSSVIE 77
Query: 471 ATFQAFSPDTFTVILDFVYSGRLSLTGQNVIEVMSAASFLQMTDVISVC--KTFIKSSLD 644
F D F +L+++Y+ ++S+ ++V +MS+ L + + +C K + S +
Sbjct: 78 IDF--LRSDIFEEVLNYMYTAKISVKKEDVNLMMSSGQILGIRFLDKLCSQKRDVSSPDE 135
Query: 645 ISEKEKDRYFSLSDK------DASSNGIERSSFYSGGWQDESSSPRSHLSPDQGTGIISG 806
+ + K +Y ++ DA + +E D+ SP G
Sbjct: 136 NNGQSKSKYCLKINRPIGDAADAQDDDVEEIG-------DQDDSPSDDTVEGTPPSQEDG 188
Query: 807 KSWSKYNYHPAPQRNTQQPLAKHEQRKESMKKSKHLRLSQPSETTQYK---SSKREARTX 977
KS P Q+ + K +E K + + + + ET + K S +A T
Sbjct: 189 KS-------PTTTLRVQEAILKELGSEEVRKVNCYGQEVESMETPESKDLGSQTPQALTF 241
Query: 978 XXXXXXXXXEEQ-----AQMDVEMDSTPVGYQYGQGA-DVTSRSFPDDLPRMR------- 1118
E+ A D++ + G+ Q A ++F D+ R+R
Sbjct: 242 NDGMSEVKDEQTPGWTTAASDMKFEYLLYGHHREQIACQACGKTFSDE-GRLRKHEKLHT 300
Query: 1119 ----FKCPYCTHVVKRKADLKRHLRCHTGERPYPCQACGKRFSRLDHLSSHFRTIHQACK 1286
F C CT +A LK HL+ HTG +PY C+ CGK F R L H R
Sbjct: 301 ADRPFVCEMCTKGFTTQAHLKEHLKIHTGYKPYSCEVCGKSFIRAPDLKKHERVHSNERP 360
Query: 1287 LICRKCKR 1310
C C +
Sbjct: 361 FACHMCDK 368
>ref|XP_855835.1| PREDICTED: similar to BTB (POZ) domain containing 15 isoform 3 [Canis
familiaris].
Length = 502
Score = 91.7 bits (226), Expect = 2e-18
Identities = 95/385 (24%), Positives = 159/385 (41%), Gaps = 46/385 (11%)
Frame = +3
Query: 285 SSHQSHLLQQLNEQRRQDVFCDCNILVEGKVFKAHRNVLFASSGYFKMLLSQTSKETSQP 464
SSH +L +LN R FCD I V+ K+F+AH+ VL A S +F+ L +++ ++
Sbjct: 11 SSHSQEMLGKLNMLRNDGHFCDITIRVQDKIFRAHKVVLAACSDFFRTKLVGQAEDENK- 69
Query: 465 TTATFQAFSPDTFTVILDFVYSGRLSLTGQNVIEVMSAASFLQMTDVISVCKTFIKSSL- 641
+ F +L++ Y+ LS+ +N+I+V++AAS++QM V S C F+KSS+
Sbjct: 70 NVLDLHHVTVTGFIPLLEYAYTATLSINTENIIDVLAAASYMQMFSVASTCSEFMKSSIL 129
Query: 642 ---DISEKEK---------------DRYFSLSDKDASSNGIERSSFYSGGWQDESS---- 755
S+ EK R S+S + + +ER+ + +
Sbjct: 130 WNTPNSQPEKSLDAGQENNSNCNFTSRDGSISPVSSECSVVERTIPVCRESRRKRKSYIV 189
Query: 756 -SPRSHLSPDQGTG----IISGKSWSKYNYHPAPQRNT---QQPLAKHEQRKESMKK--- 902
SP S + T + S S+S+ P PL E + +++
Sbjct: 190 MSPESPVKCSTQTSSPQVLNSSASYSENRNQPVDSSLAFPWTLPLGTEEDVRVKVERLSD 249
Query: 903 -SKHLRLSQPSETTQYKSSKREARTXXXXXXXXXXEEQAQMDV-------EMDSTPVGYQ 1058
H +SQP +Q S ++ EQ Q D+ + S G
Sbjct: 250 EEVHEEVSQPVSVSQSSLSDQQT---------VPGSEQVQEDLLISPQSSSIGSVDEGVT 300
Query: 1059 YG----QGADVTSRSFPDDLPRMRFKCPYCTHVVKRKADLKRHLRCHTGERPYPCQACGK 1226
G Q T+ DD + PY ++ + +R + +RP+ C CG
Sbjct: 301 EGLPTLQSTSSTNAHADDDDRLENVQYPYQLYIAPSTSSTERP-SPNGPDRPFQCPTCGV 359
Query: 1227 RFSRLDHLSSHFRTIHQACKLICRK 1301
RF+R+ +L H IH + CR+
Sbjct: 360 RFTRIQNLKQHM-LIHSGNQAPCRE 383
>ref|XP_545944.2| PREDICTED: similar to zinc finger protein 509 [Canis familiaris].
Length = 765
Score = 91.7 bits (226), Expect = 2e-18
Identities = 48/119 (40%), Positives = 72/119 (60%)
Frame = +3
Query: 282 ISSHQSHLLQQLNEQRRQDVFCDCNILVEGKVFKAHRNVLFASSGYFKMLLSQTSKETSQ 461
+++H HLLQQL EQR Q + CDC ++V+G FKAH+NVL A S YF+ L +S + S
Sbjct: 4 VATHSCHLLQQLQEQRIQGLLCDCMLVVKGVCFKAHKNVLAAFSQYFRSLFQNSSGQKSD 63
Query: 462 PTTATFQAFSPDTFTVILDFVYSGRLSLTGQNVIEVMSAASFLQMTDVISVCKTFIKSS 638
+ S ILDF+Y+ L L N+ ++ A LQ+ +V+++C TF+KS+
Sbjct: 64 VFHLDIKNVS--GIGQILDFMYTSHLDLNQDNIQVMLDIAQCLQVQNVLNLCHTFLKST 120
Score = 54.3 bits (129), Expect = 3e-07
Identities = 35/125 (28%), Positives = 58/125 (46%), Gaps = 1/125 (0%)
Frame = +3
Query: 1005 EEQAQMDVEMDSTPVGYQYGQGADVTSRSFPDDLPRMRFKCPYCTHVVKRKADLKRHLRC 1184
+ Q Q E+ P +++ ++ RS + P F+C C + +L+ HLR
Sbjct: 391 QSQRQYTCELCGKP--FKHPSNLELHKRSHTGEKP---FECNICGKHFSQAGNLQTHLRR 445
Query: 1185 HTGERPYPCQACGKRFSRLDHLSSHFRTIHQACK-LICRKCKRHVTDLTGQVVXEGTGAT 1361
H+GE+PY C+ CGKRF+ + H IH K +C C R ++ + + T
Sbjct: 446 HSGEKPYICEICGKRFAASGDVQRHI-IIHSGEKPHLCDICGRGFSNFSNLKEHKKTHTA 504
Query: 1362 DSVMS 1376
D V +
Sbjct: 505 DKVFT 509
>ref|XP_547497.2| PREDICTED: similar to zinc finger protein 238 isoform 1 [Canis
familiaris].
Length = 531
Score = 90.1 bits (222), Expect = 5e-18
Identities = 58/175 (33%), Positives = 90/175 (51%), Gaps = 5/175 (2%)
Frame = +3
Query: 276 MEISSHQSHLLQQLNEQRRQDVFCDCNILVEGKVFKAHRNVLFASSGYFKMLLSQTSKET 455
ME H HLLQ L+EQR Q CDC +LV F+AHR VL + S YF L + +
Sbjct: 10 MEFPDHSRHLLQCLSEQRHQGFLCDCTVLVGDAQFRAHRAVLASCSMYFH-LFYKDQLDK 68
Query: 456 SQPTTATFQAFSPDTFTVILDFVYSGRLSLTGQNVIEVMSAASFLQMTDVISVCKTFIK- 632
+ F ++L+F+Y G+L + +V++AAS+L M D++ VCK +K
Sbjct: 69 RDIVHLNSDIVTAPAFALLLEFMYEGKLQFKDLPIEDVLAAASYLHMYDIVKVCKKKLKE 128
Query: 633 ---SSLDISEKEKDRYFSLSDK-DASSNGIERSSFYSGGWQDESSSPRSHLSPDQ 785
+ D ++KE+D S SDK ++ S+G + +DE + +L P +
Sbjct: 129 KATTEADSTKKEEDA-SSCSDKVESLSDGSSHMAGDLPSDEDEGEDEKLNLLPSK 182
>ref|XP_855026.1| PREDICTED: similar to zinc finger and BTB domain containing 3
[Canis familiaris].
Length = 566
Score = 86.7 bits (213), Expect = 5e-17
Identities = 46/135 (34%), Positives = 74/135 (54%), Gaps = 5/135 (3%)
Frame = +3
Query: 276 MEISSHQSHLLQQLNEQRRQDVFCDCNILVEGKVFKAHRNVLFASSGYFKMLLSQTSKET 455
ME H LLQ L EQR Q CDC ++V F AHR VL + S +F++ + +
Sbjct: 54 MEFPDHSQQLLQSLREQRSQGFLCDCTVMVGSTQFLAHRAVLASCSPFFQLFYKERELDK 113
Query: 456 SQPTTATFQAFSPDTFTVILDFVYSGRLSLTGQNVIE-VMSAASFLQMTDVISVCKTFIK 632
+ + F ++LDF+Y+G+L L G +E V++AAS+L M D++ VCK ++
Sbjct: 114 RDLVCIHNEIVTAPAFGLLLDFMYAGQLVLRGDTPVEDVLAAASYLHMNDIVKVCKRRLQ 173
Query: 633 ----SSLDISEKEKD 665
+ D ++KE++
Sbjct: 174 ARALAEADSTKKEEE 188
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 52,686,133
Number of extensions: 1310209
Number of successful extensions: 11304
Number of sequences better than 1.0e-05: 599
Number of HSP's gapped: 10427
Number of HSP's successfully gapped: 2175
Length of query: 480
Length of database: 18,874,504
Length adjustment: 107
Effective length of query: 373
Effective length of database: 15,307,552
Effective search space: 5709716896
Effective search space used: 5709716896
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-004239
(1442 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001035531.1| zinc finger and BTB domain-containing protei... 673 0.0
Alignment gi|NP_001139192.1| zinc finger and BTB domain-containing protei... 161 2e-39
Alignment gi|NP_079500.2| zinc finger and BTB domain-containing protein 4... 146 5e-35
Alignment gi|NP_001099009.1| zinc finger and BTB domain-containing protei... 123 4e-28
Alignment gi|NP_076418.3| zinc finger and BTB domain-containing protein 1... 123 4e-28
Alignment gi|NP_003434.2| zinc finger and BTB domain-containing protein 1... 118 2e-26
Alignment gi|NP_061127.1| myoneurin isoform A [Homo sapiens]. 100 6e-21
Alignment gi|NP_001172048.1| myoneurin isoform B [Homo sapiens]. 100 6e-21
Alignment gi|NP_001172047.1| myoneurin isoform A [Homo sapiens]. 100 6e-21
Alignment gi|NP_660334.3| zinc finger and BTB domain-containing protein 4... 93 5e-19
>ref|NP_001035531.1| zinc finger and BTB domain-containing protein 8A [Homo sapiens].
Length = 441
Score = 673 bits (1736), Expect(2) = 0.0
Identities = 327/359 (91%), Positives = 340/359 (94%)
Frame = +3
Query: 276 MEISSHQSHLLQQLNEQRRQDVFCDCNILVEGKVFKAHRNVLFASSGYFKMLLSQTSKET 455
MEISSHQSHLLQQLNEQRRQDVFCDC+ILVEGKVFKAHRNVLFASSGYFKMLLSQ SKET
Sbjct: 1 MEISSHQSHLLQQLNEQRRQDVFCDCSILVEGKVFKAHRNVLFASSGYFKMLLSQNSKET 60
Query: 456 SQPTTATFQAFSPDTFTVILDFVYSGRLSLTGQNVIEVMSAASFLQMTDVISVCKTFIKS 635
SQPTTATFQAFSPDTFTVILDFVYSG+LSLTGQNVIEVMSAASFLQMTDVISVCKTFIKS
Sbjct: 61 SQPTTATFQAFSPDTFTVILDFVYSGKLSLTGQNVIEVMSAASFLQMTDVISVCKTFIKS 120
Query: 636 SLDISEKEKDRYFSLSDKDASSNGIERSSFYSGGWQDESSSPRSHLSPDQGTGIISGKSW 815
SLDISEKEKDRYFSLSDKDA+SNG+ERSSFYSGGWQ+ SSSPRSHLSP+QGTGIISGKSW
Sbjct: 121 SLDISEKEKDRYFSLSDKDANSNGVERSSFYSGGWQEGSSSPRSHLSPEQGTGIISGKSW 180
Query: 816 SKYNYHPAPQRNTQQPLAKHEQRKESMKKSKHLRLSQPSETTQYKSSKREARTXXXXXXX 995
+KYNYHPA Q+NTQQPLAKHE RKES+KK+KHLRLSQPSE T YKSSKRE RT
Sbjct: 181 NKYNYHPASQKNTQQPLAKHEPRKESIKKTKHLRLSQPSEVTHYKSSKREVRTSDSSSHV 240
Query: 996 XXXEEQAQMDVEMDSTPVGYQYGQGADVTSRSFPDDLPRMRFKCPYCTHVVKRKADLKRH 1175
EEQAQ+D EMDSTPVGYQYGQG+DVTS+SFPDDLPRMRFKCPYCTHVVKRKADLKRH
Sbjct: 241 SQSEEQAQIDAEMDSTPVGYQYGQGSDVTSKSFPDDLPRMRFKCPYCTHVVKRKADLKRH 300
Query: 1176 LRCHTGERPYPCQACGKRFSRLDHLSSHFRTIHQACKLICRKCKRHVTDLTGQVVXEGT 1352
LRCHTGERPYPCQACGKRFSRLDHLSSHFRTIHQACKLICRKCKRHVTDLTGQVV EGT
Sbjct: 301 LRCHTGERPYPCQACGKRFSRLDHLSSHFRTIHQACKLICRKCKRHVTDLTGQVVQEGT 359
Score = 54.7 bits (130), Expect(2) = 0.0
Identities = 25/26 (96%), Positives = 25/26 (96%)
Frame = +2
Query: 1364 LCNECLAEVGIDSLPIDLEAEQHLMS 1441
LCNECLAE GIDSLPIDLEAEQHLMS
Sbjct: 364 LCNECLAEFGIDSLPIDLEAEQHLMS 389
>ref|NP_001139192.1| zinc finger and BTB domain-containing protein 8B [Homo sapiens].
Length = 495
Score = 161 bits (407), Expect = 2e-39
Identities = 79/164 (48%), Positives = 120/164 (73%)
Frame = +3
Query: 276 MEISSHQSHLLQQLNEQRRQDVFCDCNILVEGKVFKAHRNVLFASSGYFKMLLSQTSKET 455
ME+ S+ + LL +LNEQR++D FCDC+I+VEG++FKAHRN+LFA+SGYF+ LL +++
Sbjct: 1 MEMQSYYAKLLGELNEQRKRDFFCDCSIIVEGRIFKAHRNILFANSGYFRALLIHYIQDS 60
Query: 456 SQPTTATFQAFSPDTFTVILDFVYSGRLSLTGQNVIEVMSAASFLQMTDVISVCKTFIKS 635
+ +TA+ + D F++ILDF+YSG+L L G+NVIEVMSAAS+LQM DV++ CKT+I+S
Sbjct: 61 GRHSTASLDIVTSDAFSIILDFLYSGKLDLCGENVIEVMSAASYLQMNDVVNFCKTYIRS 120
Query: 636 SLDISEKEKDRYFSLSDKDASSNGIERSSFYSGGWQDESSSPRS 767
SLDI K ++ +++ A++ ++ + Q +S SP S
Sbjct: 121 SLDICRK-MEKEAAVAAAVAAAAAAAAAAAAAAAHQVDSESPSS 163
Score = 90.5 bits (223), Expect = 3e-18
Identities = 38/78 (48%), Positives = 54/78 (69%), Gaps = 1/78 (1%)
Frame = +3
Query: 1104 LPRMRFKCPYCTHVVKRKADLKRHLRCHTGERPYPCQACGKRFSRLDHLSSHFRTIHQAC 1283
+P KCP+C + K+K LKRH+R HTGERPYPC+ CGKRF+R +HL SH ++H++
Sbjct: 336 VPIKLHKCPFCPYTAKQKGILKRHIRSHTGERPYPCETCGKRFTRQEHLRSHALSVHRSN 395
Query: 1284 K-LICRKCKRHVTDLTGQ 1334
+ +IC+ C+R T Q
Sbjct: 396 RPIICKGCRRTFTSHLSQ 413
>ref|NP_079500.2| zinc finger and BTB domain-containing protein 46 [Homo sapiens].
Length = 589
Score = 146 bits (368), Expect = 5e-35
Identities = 90/210 (42%), Positives = 119/210 (56%), Gaps = 13/210 (6%)
Frame = +3
Query: 276 MEISSHQSHLLQQLNEQRRQDVFCDCNILVEGKVFKAHRNVLFASSGYFKMLLSQTSKET 455
MEI+SH HLL++LNEQR+ V CD ++VEGKVFKAH+NVL SS YFK L Q K +
Sbjct: 8 MEITSHYRHLLRELNEQRQHGVLCDVCVVVEGKVFKAHKNVLLGSSRYFKTLYCQVQKTS 67
Query: 456 SQPTTATFQAFSPDTFTVILDFVYSGRLSLTGQNVIEVMSAASFLQMTDVISVCKTFIKS 635
Q T + F I+DF+YS L+LT +NVIEVMSAASFLQMTD++ C FIK+
Sbjct: 68 EQATVTHLDIVTAQGFKAIIDFMYSAHLALTSRNVIEVMSAASFLQMTDIVQACHDFIKA 127
Query: 636 SLDISEK----EKDRYFSLSDKDASSNGIERSSFYSG----GWQDESSSPRSHLSPDQGT 791
+LDIS K ++ F + +SS S+ +G W +SP ++ S D
Sbjct: 128 ALDISIKSDASDELAEFEIGASSSSSTEALISAVMAGRSISPWLARRTSP-ANSSGDSAI 186
Query: 792 GII--SGKSWSKYNYHP---APQRNTQQPL 866
G S+ K + P P + QPL
Sbjct: 187 ASCHDGGSSYGKEDQEPKADGPDDVSSQPL 216
Score = 82.0 bits (201), Expect = 1e-15
Identities = 32/67 (47%), Positives = 44/67 (65%)
Frame = +3
Query: 1110 RMRFKCPYCTHVVKRKADLKRHLRCHTGERPYPCQACGKRFSRLDHLSSHFRTIHQACKL 1289
R +FKCPYC+ + LKRH+R HTGERPYPC+ CGK+F+R +H+ H + K
Sbjct: 415 RKKFKCPYCSFSAMHQCILKRHMRSHTGERPYPCEICGKKFTRREHMKRHTLVHSKDKKY 474
Query: 1290 ICRKCKR 1310
+C+ C R
Sbjct: 475 VCKVCSR 481
>ref|NP_001099009.1| zinc finger and BTB domain-containing protein 10 isoform a [Homo
sapiens].
Length = 871
Score = 123 bits (309), Expect = 4e-28
Identities = 62/127 (48%), Positives = 90/127 (70%), Gaps = 1/127 (0%)
Frame = +3
Query: 285 SSHQSHLLQQLNEQRRQDVFCDCNILVEGKVFKAHRNVLFASSGYFKMLLSQTSKET-SQ 461
+S+ LL+QLNEQR++ + CD +I+V GK+FKAH+N+L A S +FK L ++KE+ +Q
Sbjct: 344 NSYCYQLLRQLNEQRKKGILCDVSIVVSGKIFKAHKNILVAGSRFFKTLYCFSNKESPNQ 403
Query: 462 PTTATFQAFSPDTFTVILDFVYSGRLSLTGQNVIEVMSAASFLQMTDVISVCKTFIKSSL 641
T + F+VILDF+YSG L LT QN IEVM+ AS+LQM++V+ C+ FIK +L
Sbjct: 404 NNTTHLDIAAVQGFSVILDFLYSGNLVLTSQNAIEVMTVASYLQMSEVVQTCRNFIKDAL 463
Query: 642 DISEKEK 662
+IS K +
Sbjct: 464 NISIKSE 470
Score = 64.3 bits (155), Expect = 3e-10
Identities = 27/65 (41%), Positives = 38/65 (58%)
Frame = +3
Query: 1116 RFKCPYCTHVVKRKADLKRHLRCHTGERPYPCQACGKRFSRLDHLSSHFRTIHQACKLIC 1295
+ KCP+C++V K + LKRHL HTG R + C CGK F+R +H+ H + K C
Sbjct: 721 KLKCPHCSYVAKYRRTLKRHLLIHTGVRSFSCDICGKLFTRREHVKRHSLVHKKDKKYKC 780
Query: 1296 RKCKR 1310
CK+
Sbjct: 781 MVCKK 785
>ref|NP_076418.3| zinc finger and BTB domain-containing protein 10 isoform b [Homo
sapiens].
Length = 847
Score = 123 bits (309), Expect = 4e-28
Identities = 62/127 (48%), Positives = 90/127 (70%), Gaps = 1/127 (0%)
Frame = +3
Query: 285 SSHQSHLLQQLNEQRRQDVFCDCNILVEGKVFKAHRNVLFASSGYFKMLLSQTSKET-SQ 461
+S+ LL+QLNEQR++ + CD +I+V GK+FKAH+N+L A S +FK L ++KE+ +Q
Sbjct: 344 NSYCYQLLRQLNEQRKKGILCDVSIVVSGKIFKAHKNILVAGSRFFKTLYCFSNKESPNQ 403
Query: 462 PTTATFQAFSPDTFTVILDFVYSGRLSLTGQNVIEVMSAASFLQMTDVISVCKTFIKSSL 641
T + F+VILDF+YSG L LT QN IEVM+ AS+LQM++V+ C+ FIK +L
Sbjct: 404 NNTTHLDIAAVQGFSVILDFLYSGNLVLTSQNAIEVMTVASYLQMSEVVQTCRNFIKDAL 463
Query: 642 DISEKEK 662
+IS K +
Sbjct: 464 NISIKSE 470
Score = 64.3 bits (155), Expect = 3e-10
Identities = 27/65 (41%), Positives = 38/65 (58%)
Frame = +3
Query: 1116 RFKCPYCTHVVKRKADLKRHLRCHTGERPYPCQACGKRFSRLDHLSSHFRTIHQACKLIC 1295
+ KCP+C++V K + LKRHL HTG R + C CGK F+R +H+ H + K C
Sbjct: 697 KLKCPHCSYVAKYRRTLKRHLLIHTGVRSFSCDICGKLFTRREHVKRHSLVHKKDKKYKC 756
Query: 1296 RKCKR 1310
CK+
Sbjct: 757 MVCKK 761
>ref|NP_003434.2| zinc finger and BTB domain-containing protein 17 isoform 2 [Homo
sapiens].
Length = 803
Score = 118 bits (295), Expect = 2e-26
Identities = 101/384 (26%), Positives = 166/384 (43%), Gaps = 41/384 (10%)
Frame = +3
Query: 276 MEISSHQSHLLQQLNEQRRQDVFCDCNILVEGKVFKAHRNVLFASSGYFKMLLSQTSKET 455
M+ H H+L+QLN+QR+ + CDC +V+G FKAH+ VL A S YFKML
Sbjct: 1 MDFPQHSQHVLEQLNQQRQLGLLCDCTFVVDGVHFKAHKAVLAACSEYFKMLF------V 54
Query: 456 SQPTTATFQAFSPDTFTVILDFVYSGRLSLTGQNVIEVMSAASFLQMTDVISVCKTFIKS 635
Q + +L+F+Y+ +LSL+ +NV +V++ A+FLQM D+I+ C +KS
Sbjct: 55 DQKDVVHLDISNAAGLGQVLEFMYTAKLSLSPENVDDVLAVATFLQMQDIITACHA-LKS 113
Query: 636 SLD-------------------ISEKEKDRYFSLSDKDAS--------------SNGIER 716
+ +++EK +LS + + G +
Sbjct: 114 LAEPATSPGGNAEALATEGGDKRAKEEKVATSTLSRLEQAGRSTPIGPSRDLKEERGGQA 173
Query: 717 SSFYSGGWQDESSS-----PRSHLSPDQGTGIISGKSWSKYNYHPAPQRNTQQPLAKHEQ 881
S SG Q E + P L PD +G+ + ++ + + + Q +P K E+
Sbjct: 174 QSAASGAEQTEKADAPREPPPVELKPDPTSGMAAAEAEAALS-ESSEQEMEVEPARKGEE 232
Query: 882 RKESMKKSKHLRLSQPSETTQYKSSKREARTXXXXXXXXXXEEQAQMD--VEMDSTPVGY 1055
++ ++ + + P+E + S EE A D E+ S G
Sbjct: 233 EQKEQEEQEE-EGAGPAEVKEEGSQLENGEA----PEENENEESAGTDSGQELGSEARGL 287
Query: 1056 QYGQGADVT-SRSFPDDLPRMRFKCPYCTHVVKRKADLKRHLRCHTGERPYPCQACGKRF 1232
+ G D T S+++ + KC C + KRH+R HTGE+P+ C+ C K F
Sbjct: 288 RSGTYGDRTESKAYGSVI----HKCEDCGKEFTHTGNFKRHIRIHTGEKPFSCRECSKAF 343
Query: 1233 SRLDHLSSHFRTIHQACKLICRKC 1304
S +H +T C +C
Sbjct: 344 SDPAACKAHEKTHSPLKPYGCEEC 367
Score = 62.8 bits (151), Expect = 8e-10
Identities = 24/52 (46%), Positives = 34/52 (65%)
Frame = +3
Query: 1122 KCPYCTHVVKRKADLKRHLRCHTGERPYPCQACGKRFSRLDHLSSHFRTIHQ 1277
KC C+ DL +H+ HTGE+PY C CG+ F+R+D+L SH +T+HQ
Sbjct: 587 KCSVCSKAFVNVGDLSKHIIIHTGEKPYLCDKCGRGFNRVDNLRSHVKTVHQ 638
Score = 57.4 bits (137), Expect = 3e-08
Identities = 32/94 (34%), Positives = 44/94 (46%), Gaps = 11/94 (11%)
Frame = +3
Query: 1074 DVTSRSFPDDLPRMRF----------KCPYCTHVVKRKADLKRHLRCHTGERPYPCQACG 1223
D RSF D +MR KCP+C + +LK HL+ H + P C+ CG
Sbjct: 421 DYCGRSFSDPTSKMRHLETHDTDKEHKCPHCDKKFNQVGNLKAHLKIHIADGPLKCRECG 480
Query: 1224 KRFSRLDHLSSHFRTIHQACK-LICRKCKRHVTD 1322
K+F+ +L H R IH K +C C+R D
Sbjct: 481 KQFTTSGNLKRHLR-IHSGEKPYVCIHCQRQFAD 513
Score = 52.8 bits (125), Expect = 8e-07
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Frame = +3
Query: 1122 KCPYCTHVVKRKADLKRHLRCHTGERPYPCQACGKRFSRLDHLSSHFR---TIHQACKLI 1292
+C C + + L H+R HTGE+PY C+ CGKRF + L++H R I +
Sbjct: 531 QCVMCGKAFTQASSLIAHVRQHTGEKPYVCERCGKRFVQSSQLANHIRHHDNIRPHKCSV 590
Query: 1293 CRKCKRHVTDLTGQVV 1340
C K +V DL+ ++
Sbjct: 591 CSKAFVNVGDLSKHII 606
Score = 50.8 bits (120), Expect = 3e-06
Identities = 28/68 (41%), Positives = 38/68 (55%), Gaps = 5/68 (7%)
Frame = +3
Query: 1128 PY-CTHVVKRKAD---LKRHLRCHTGERPYPCQACGKRFSRLDHLSSHFRTIHQACKLIC 1295
PY C H ++ AD L+RH+R HTGE+P C CGK F++ L +H R +C
Sbjct: 501 PYVCIHCQRQFADPGALQRHVRIHTGEKPCQCVMCGKAFTQASSLIAHVRQHTGEKPYVC 560
Query: 1296 RKC-KRHV 1316
+C KR V
Sbjct: 561 ERCGKRFV 568
>ref|NP_061127.1| myoneurin isoform A [Homo sapiens].
Length = 610
Score = 99.8 bits (247), Expect = 6e-21
Identities = 102/406 (25%), Positives = 159/406 (39%), Gaps = 61/406 (15%)
Frame = +3
Query: 276 MEISSHQSHLLQQLNEQRRQDVFCDCNILVEGKVFKAHRNVLFASSGYFKMLLSQTSKET 455
M+ S H HLL++LN+QR CDC I++ FKAHRNVL + S YF + TS+
Sbjct: 1 MQYSHHCEHLLERLNKQREAGFLCDCTIVIGEFQFKAHRNVLASFSEYFGAIYRSTSENN 60
Query: 456 SQPTTATFQAFSPDTFTVILDFVYSGRLSLTGQNVIEVMSAASFLQMTDVISVCKTFIKS 635
+ +A D F +L+F+Y+G L+L NV E+ AA +L++ +V++ CK IK
Sbjct: 61 VFLDQSQVKA---DGFQKLLEFIYTGTLNLDSWNVKEIHQAADYLKVEEVVTKCK--IK- 114
Query: 636 SLDISEKEKDRYFSLSDKDASSNGIERSSFYSGGWQDESSSPRSHLSPDQGTGIISGKSW 815
+E +F + E SS ++ +Q T +++ + +
Sbjct: 115 ------------------------MEDFAFIANPSSTEISSITGNIELNQQTCLLTLRDY 150
Query: 816 SKYNYHPAP----QRNTQQ-PLAKHEQRKESMKKSKHLRLSQPSETTQYKSSKREARTXX 980
+ Q N +Q LAK + + KK+ + + ++T QY S E +
Sbjct: 151 NNREKSEVSTDLIQANPKQGALAKKSSQTKKKKKAFNSPKTGQNKTVQYPSDILENASV- 209
Query: 981 XXXXXXXXEEQAQMDVEMDSTPVGYQYGQGAD--------VTSRSFPDD-------LPRM 1115
+ +D TPV Q Q D V +FP + R
Sbjct: 210 ----------ELFLDANKLPTPVVEQVAQINDNSELELTSVVENTFPAQDIVHTVTVKRK 259
Query: 1116 RFK----CPYCTHVVKRKADLK-------------------------------------R 1172
R K C H + A +K R
Sbjct: 260 RGKSQPNCALKEHSMSNIASVKSPYEAENSGEELDQRYSKAKPMCNTCGKVFSEASSLRR 319
Query: 1173 HLRCHTGERPYPCQACGKRFSRLDHLSSHFRTIHQACKLICRKCKR 1310
H+R H G +PY C CGK F++ + L +H RT C C +
Sbjct: 320 HMRIHKGVKPYVCHLCGKAFTQCNQLKTHVRTHTGEKPYKCELCDK 365
Score = 51.2 bits (121), Expect = 2e-06
Identities = 25/69 (36%), Positives = 31/69 (44%)
Frame = +3
Query: 1119 FKCPYCTHVVKRKADLKRHLRCHTGERPYPCQACGKRFSRLDHLSSHFRTIHQACKLICR 1298
+ C C + L H R HTGE+PY C CGK F L+ HFR+ IC
Sbjct: 443 YVCDTCGKAFAVSSSLITHSRKHTGEKPYICGICGKSFISSGELNKHFRSHTGERPFICE 502
Query: 1299 KCKRHVTDL 1325
C TD+
Sbjct: 503 LCGNSYTDI 511
Score = 50.8 bits (120), Expect = 3e-06
Identities = 22/62 (35%), Positives = 32/62 (51%)
Frame = +3
Query: 1119 FKCPYCTHVVKRKADLKRHLRCHTGERPYPCQACGKRFSRLDHLSSHFRTIHQACKLICR 1298
+KC C ++LK H R H+GE+PY C CG+RF++ L+ H R +C
Sbjct: 387 YKCDVCNLQFATSSNLKIHARKHSGEKPYVCDRCGQRFAQASTLTYHVRRHTGEKPYVCD 446
Query: 1299 KC 1304
C
Sbjct: 447 TC 448
>ref|NP_001172048.1| myoneurin isoform B [Homo sapiens].
Length = 581
Score = 99.8 bits (247), Expect = 6e-21
Identities = 102/406 (25%), Positives = 159/406 (39%), Gaps = 61/406 (15%)
Frame = +3
Query: 276 MEISSHQSHLLQQLNEQRRQDVFCDCNILVEGKVFKAHRNVLFASSGYFKMLLSQTSKET 455
M+ S H HLL++LN+QR CDC I++ FKAHRNVL + S YF + TS+
Sbjct: 1 MQYSHHCEHLLERLNKQREAGFLCDCTIVIGEFQFKAHRNVLASFSEYFGAIYRSTSENN 60
Query: 456 SQPTTATFQAFSPDTFTVILDFVYSGRLSLTGQNVIEVMSAASFLQMTDVISVCKTFIKS 635
+ +A D F +L+F+Y+G L+L NV E+ AA +L++ +V++ CK IK
Sbjct: 61 VFLDQSQVKA---DGFQKLLEFIYTGTLNLDSWNVKEIHQAADYLKVEEVVTKCK--IK- 114
Query: 636 SLDISEKEKDRYFSLSDKDASSNGIERSSFYSGGWQDESSSPRSHLSPDQGTGIISGKSW 815
+E +F + E SS ++ +Q T +++ + +
Sbjct: 115 ------------------------MEDFAFIANPSSTEISSITGNIELNQQTCLLTLRDY 150
Query: 816 SKYNYHPAP----QRNTQQ-PLAKHEQRKESMKKSKHLRLSQPSETTQYKSSKREARTXX 980
+ Q N +Q LAK + + KK+ + + ++T QY S E +
Sbjct: 151 NNREKSEVSTDLIQANPKQGALAKKSSQTKKKKKAFNSPKTGQNKTVQYPSDILENASV- 209
Query: 981 XXXXXXXXEEQAQMDVEMDSTPVGYQYGQGAD--------VTSRSFPDD-------LPRM 1115
+ +D TPV Q Q D V +FP + R
Sbjct: 210 ----------ELFLDANKLPTPVVEQVAQINDNSELELTSVVENTFPAQDIVHTVTVKRK 259
Query: 1116 RFK----CPYCTHVVKRKADLK-------------------------------------R 1172
R K C H + A +K R
Sbjct: 260 RGKSQPNCALKEHSMSNIASVKSPYEAENSGEELDQRYSKAKPMCNTCGKVFSEASSLRR 319
Query: 1173 HLRCHTGERPYPCQACGKRFSRLDHLSSHFRTIHQACKLICRKCKR 1310
H+R H G +PY C CGK F++ + L +H RT C C +
Sbjct: 320 HMRIHKGVKPYVCHLCGKAFTQCNQLKTHVRTHTGEKPYKCELCDK 365
Score = 50.8 bits (120), Expect = 3e-06
Identities = 22/62 (35%), Positives = 32/62 (51%)
Frame = +3
Query: 1119 FKCPYCTHVVKRKADLKRHLRCHTGERPYPCQACGKRFSRLDHLSSHFRTIHQACKLICR 1298
+KC C ++LK H R H+GE+PY C CG+RF++ L+ H R +C
Sbjct: 387 YKCDVCNLQFATSSNLKIHARKHSGEKPYVCDRCGQRFAQASTLTYHVRRHTGEKPYVCD 446
Query: 1299 KC 1304
C
Sbjct: 447 TC 448
>ref|NP_001172047.1| myoneurin isoform A [Homo sapiens].
Length = 610
Score = 99.8 bits (247), Expect = 6e-21
Identities = 102/406 (25%), Positives = 159/406 (39%), Gaps = 61/406 (15%)
Frame = +3
Query: 276 MEISSHQSHLLQQLNEQRRQDVFCDCNILVEGKVFKAHRNVLFASSGYFKMLLSQTSKET 455
M+ S H HLL++LN+QR CDC I++ FKAHRNVL + S YF + TS+
Sbjct: 1 MQYSHHCEHLLERLNKQREAGFLCDCTIVIGEFQFKAHRNVLASFSEYFGAIYRSTSENN 60
Query: 456 SQPTTATFQAFSPDTFTVILDFVYSGRLSLTGQNVIEVMSAASFLQMTDVISVCKTFIKS 635
+ +A D F +L+F+Y+G L+L NV E+ AA +L++ +V++ CK IK
Sbjct: 61 VFLDQSQVKA---DGFQKLLEFIYTGTLNLDSWNVKEIHQAADYLKVEEVVTKCK--IK- 114
Query: 636 SLDISEKEKDRYFSLSDKDASSNGIERSSFYSGGWQDESSSPRSHLSPDQGTGIISGKSW 815
+E +F + E SS ++ +Q T +++ + +
Sbjct: 115 ------------------------MEDFAFIANPSSTEISSITGNIELNQQTCLLTLRDY 150
Query: 816 SKYNYHPAP----QRNTQQ-PLAKHEQRKESMKKSKHLRLSQPSETTQYKSSKREARTXX 980
+ Q N +Q LAK + + KK+ + + ++T QY S E +
Sbjct: 151 NNREKSEVSTDLIQANPKQGALAKKSSQTKKKKKAFNSPKTGQNKTVQYPSDILENASV- 209
Query: 981 XXXXXXXXEEQAQMDVEMDSTPVGYQYGQGAD--------VTSRSFPDD-------LPRM 1115
+ +D TPV Q Q D V +FP + R
Sbjct: 210 ----------ELFLDANKLPTPVVEQVAQINDNSELELTSVVENTFPAQDIVHTVTVKRK 259
Query: 1116 RFK----CPYCTHVVKRKADLK-------------------------------------R 1172
R K C H + A +K R
Sbjct: 260 RGKSQPNCALKEHSMSNIASVKSPYEAENSGEELDQRYSKAKPMCNTCGKVFSEASSLRR 319
Query: 1173 HLRCHTGERPYPCQACGKRFSRLDHLSSHFRTIHQACKLICRKCKR 1310
H+R H G +PY C CGK F++ + L +H RT C C +
Sbjct: 320 HMRIHKGVKPYVCHLCGKAFTQCNQLKTHVRTHTGEKPYKCELCDK 365
Score = 51.2 bits (121), Expect = 2e-06
Identities = 25/69 (36%), Positives = 31/69 (44%)
Frame = +3
Query: 1119 FKCPYCTHVVKRKADLKRHLRCHTGERPYPCQACGKRFSRLDHLSSHFRTIHQACKLICR 1298
+ C C + L H R HTGE+PY C CGK F L+ HFR+ IC
Sbjct: 443 YVCDTCGKAFAVSSSLITHSRKHTGEKPYICGICGKSFISSGELNKHFRSHTGERPFICE 502
Query: 1299 KCKRHVTDL 1325
C TD+
Sbjct: 503 LCGNSYTDI 511
Score = 50.8 bits (120), Expect = 3e-06
Identities = 22/62 (35%), Positives = 32/62 (51%)
Frame = +3
Query: 1119 FKCPYCTHVVKRKADLKRHLRCHTGERPYPCQACGKRFSRLDHLSSHFRTIHQACKLICR 1298
+KC C ++LK H R H+GE+PY C CG+RF++ L+ H R +C
Sbjct: 387 YKCDVCNLQFATSSNLKIHARKHSGEKPYVCDRCGQRFAQASTLTYHVRRHTGEKPYVCD 446
Query: 1299 KC 1304
C
Sbjct: 447 TC 448
>ref|NP_660334.3| zinc finger and BTB domain-containing protein 49 [Homo sapiens].
Length = 765
Score = 93.2 bits (230), Expect = 5e-19
Identities = 50/124 (40%), Positives = 74/124 (59%), Gaps = 5/124 (4%)
Frame = +3
Query: 282 ISSHQSHLLQQLNEQRRQDVFCDCNILVEGKVFKAHRNVLFASSGYFKMLLSQTSKETSQ 461
+++H HLLQQL+EQR Q + CDC ++V+G FKAH+NVL A S YF+ L +S + +
Sbjct: 4 VATHSCHLLQQLHEQRIQGLLCDCMLVVKGVCFKAHKNVLAAFSQYFRSLFQNSSSQKN- 62
Query: 462 PTTATFQAFSPDTFTV-----ILDFVYSGRLSLTGQNVIEVMSAASFLQMTDVISVCKTF 626
F D V ILDF+Y+ L L N+ ++ A LQ+ +V+S+C TF
Sbjct: 63 ------DVFHLDVKNVSGIGQILDFMYTSHLDLNQDNIQVMLDTAQCLQVQNVLSLCHTF 116
Query: 627 IKSS 638
+KS+
Sbjct: 117 LKSA 120
Score = 55.1 bits (131), Expect = 2e-07
Identities = 43/179 (24%), Positives = 65/179 (36%), Gaps = 21/179 (11%)
Frame = +3
Query: 831 HPAPQRNTQQPL-------AKHEQRKESMKKSKHL--------------RLSQPSETTQY 947
HP QQP+ A H ++ +K K+ RL S+ T
Sbjct: 287 HPESDATCQQPVKQMRLKKAIHLKKLNFLKSQKYAEQVSEPKSDDGLTKRLESASKNTLE 346
Query: 948 KSSKREARTXXXXXXXXXXEEQAQMDVEMDSTPVGYQYGQGADVTSRSFPDDLPRMRFKC 1127
K+S + A + E P + Q + S+ ++ C
Sbjct: 347 KASSQSAEEKESEEVVSCENFNCISETERPEDPAALE-DQSQTLQSQR--------QYAC 397
Query: 1128 PYCTHVVKRKADLKRHLRCHTGERPYPCQACGKRFSRLDHLSSHFRTIHQACKLICRKC 1304
C K ++L+ H R HTGE+P+ C CGK FS+ +L +H R IC C
Sbjct: 398 ELCGKPFKHPSNLELHKRSHTGEKPFECNICGKHFSQAGNLQTHLRRHSGEKPYICEIC 456
Score = 53.9 bits (128), Expect = 4e-07
Identities = 35/125 (28%), Positives = 58/125 (46%), Gaps = 1/125 (0%)
Frame = +3
Query: 1005 EEQAQMDVEMDSTPVGYQYGQGADVTSRSFPDDLPRMRFKCPYCTHVVKRKADLKRHLRC 1184
+ Q Q E+ P +++ ++ RS + P F+C C + +L+ HLR
Sbjct: 390 QSQRQYACELCGKP--FKHPSNLELHKRSHTGEKP---FECNICGKHFSQAGNLQTHLRR 444
Query: 1185 HTGERPYPCQACGKRFSRLDHLSSHFRTIHQACK-LICRKCKRHVTDLTGQVVXEGTGAT 1361
H+GE+PY C+ CGKRF+ + H IH K +C C R ++ + + T
Sbjct: 445 HSGEKPYICEICGKRFAASGDVQRHI-IIHSGEKPHLCDICGRGFSNFSNLKEHKKTHTA 503
Query: 1362 DSVMS 1376
D V +
Sbjct: 504 DKVFT 508
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 51,912,706
Number of extensions: 1305863
Number of successful extensions: 15336
Number of sequences better than 1.0e-05: 994
Number of HSP's gapped: 14311
Number of HSP's successfully gapped: 3708
Length of query: 480
Length of database: 18,297,164
Length adjustment: 106
Effective length of query: 374
Effective length of database: 14,802,980
Effective search space: 5536314520
Effective search space used: 5536314520
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-004239
(1442 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_082879.1| zinc finger and BTB domain-containing protein 8... 579 e-172
Alignment gi|NP_705769.2| zinc finger and BTB domain-containing protein 8... 216 4e-56
Alignment gi|NP_082401.1| zinc finger and BTB domain-containing protein 4... 146 5e-35
Alignment gi|NP_081932.1| zinc finger and BTB domain-containing protein 4... 146 5e-35
Alignment gi|NP_808328.2| zinc finger and BTB domain containing 10 [Mus m... 124 1e-28
Alignment gi|NP_033567.2| zinc finger and BTB domain-containing protein 1... 120 2e-27
Alignment gi|NP_085034.2| myoneurin [Mus musculus]. 107 2e-23
Alignment gi|NP_033573.1| zinc finger protein 161 [Mus musculus]. 104 2e-22
Alignment gi|NP_700447.2| zinc finger and BTB domain-containing protein 2... 100 3e-21
Alignment gi|NP_031554.1| B-cell CLL/lymphoma 6 member B protein [Mus mus... 99 8e-21
>ref|NP_082879.1| zinc finger and BTB domain-containing protein 8A [Mus musculus].
Length = 434
Score = 579 bits (1493), Expect(2) = e-172
Identities = 285/359 (79%), Positives = 305/359 (84%)
Frame = +3
Query: 276 MEISSHQSHLLQQLNEQRRQDVFCDCNILVEGKVFKAHRNVLFASSGYFKMLLSQTSKET 455
MEISSHQS+LLQQLNEQRRQDVFCDC+ILVEGKVFKAHRNVLFASSGYFKMLLSQ S+ET
Sbjct: 1 MEISSHQSYLLQQLNEQRRQDVFCDCSILVEGKVFKAHRNVLFASSGYFKMLLSQNSRET 60
Query: 456 SQPTTATFQAFSPDTFTVILDFVYSGRLSLTGQNVIEVMSAASFLQMTDVISVCKTFIKS 635
SQPTTATFQ FSPDTFTVILDFVYSG+LSLTGQNVIEVMSAASFLQMTDVISVCKTFIKS
Sbjct: 61 SQPTTATFQTFSPDTFTVILDFVYSGKLSLTGQNVIEVMSAASFLQMTDVISVCKTFIKS 120
Query: 636 SLDISEKEKDRYFSLSDKDASSNGIERSSFYSGGWQDESSSPRSHLSPDQGTGIISGKSW 815
SLDISEKEKDRYFSLSDKD SNG+ER FYS WQ+E SP SH+SPD GK W
Sbjct: 121 SLDISEKEKDRYFSLSDKDTGSNGVERPPFYSSSWQEEGGSPHSHVSPD------PGKPW 174
Query: 816 SKYNYHPAPQRNTQQPLAKHEQRKESMKKSKHLRLSQPSETTQYKSSKREARTXXXXXXX 995
+KY Y PA QR+ Q+PLAKHEQRKE KK+KH+RL QPSE +K K EA+T
Sbjct: 175 NKYGYPPASQRSPQRPLAKHEQRKEPSKKAKHVRLPQPSEVVHFKPGKGEAQT-DSGNHV 233
Query: 996 XXXEEQAQMDVEMDSTPVGYQYGQGADVTSRSFPDDLPRMRFKCPYCTHVVKRKADLKRH 1175
EEQ +D E+D P G+QY QG D +RSFPDDL R+RFKCP+CTHVVKRKADLKRH
Sbjct: 234 SQSEEQVPVDAEVDPAPAGFQYSQGPDGIARSFPDDLTRLRFKCPFCTHVVKRKADLKRH 293
Query: 1176 LRCHTGERPYPCQACGKRFSRLDHLSSHFRTIHQACKLICRKCKRHVTDLTGQVVXEGT 1352
LRCHTGERPYPCQACGKRFSRLDHLSSHFRTIHQACKLICRKCKRHVTDLTGQVV EGT
Sbjct: 294 LRCHTGERPYPCQACGKRFSRLDHLSSHFRTIHQACKLICRKCKRHVTDLTGQVVQEGT 352
Score = 45.8 bits (107), Expect(2) = e-172
Identities = 19/23 (82%), Positives = 22/23 (95%)
Frame = +2
Query: 1364 LCNECLAEVGIDSLPIDLEAEQH 1432
LCNECLA+VG++SLP DLEAEQH
Sbjct: 357 LCNECLADVGMESLPADLEAEQH 379
>ref|NP_705769.2| zinc finger and BTB domain-containing protein 8B [Mus musculus].
Length = 484
Score = 216 bits (550), Expect = 4e-56
Identities = 141/411 (34%), Positives = 214/411 (52%), Gaps = 58/411 (14%)
Frame = +3
Query: 276 MEISSHQSHLLQQLNEQRRQDVFCDCNILVEGKVFKAHRNVLFASSGYFKMLLSQTSKET 455
ME S+ + LL +LNEQR++D FCDC+I+VEG++FKAHRN+LFA+SGYF+ LL +++
Sbjct: 1 MEAQSYCAKLLGELNEQRKRDFFCDCSIIVEGRIFKAHRNILFANSGYFRALLLHYIQDS 60
Query: 456 SQPTTATFQAFSPDTFTVILDFVYSGRLSLTGQNVIEVMSAASFLQMTDVISVCKTFIKS 635
+ +TA+ + D F+ ILDF+YSG+L L G+NVIEVMSAAS+LQM +V++ CKT+I+S
Sbjct: 61 GRHSTASLDIVTSDAFSTILDFLYSGKLDLCGENVIEVMSAASYLQMNEVVNFCKTYIRS 120
Query: 636 SLDISEK-EKDRYFSLS---------------DKDASSNGIERSS-----FYSGGWQDES 752
SLDI K EK+ + + D ++ S+G+E +S F S E
Sbjct: 121 SLDICRKMEKEAAVAAAMAAAAAAAAAAAHQIDSESPSSGLEGTSCGTKSFVSSPVDGEG 180
Query: 753 SSPRSHLSPD------------QGTGI-------ISGKSWSKYNYHPA-----PQRNTQQ 860
S + S D QG+G+ + + K + A QQ
Sbjct: 181 SLDCTISSCDDCHPLELVAKDSQGSGVSDNDLCVVPRRVEPKVEFDVARVEVEADEQLQQ 240
Query: 861 PLAKHEQRKESMKKSKHLRLSQPSETTQYKSSKREARTXXXXXXXXXXEEQAQMDVEMDS 1040
A +E + ++ L L+ +S + + + +D
Sbjct: 241 YAAPLAHMEEGLPSNQALDLTY--------NSYHVKQFLEALLRNGAVQSKDDLDCHSSR 292
Query: 1041 TPVGYQYGQGA------DVTSRSFPDD------LPRMRFKCPYCTHVVKRKADLKRHLRC 1184
G G G DV + + +D +P +CP+C + K+K LKRH+R
Sbjct: 293 GLEGRLEGPGVAMSSVMDVQNDWYREDAGDVLVVPIKLHRCPFCPYTAKQKGILKRHIRS 352
Query: 1185 HTGERPYPCQACGKRFSRLDHLSSHFRTIHQACK-LICRKCKRHVTDLTGQ 1334
HTGERPYPC+ CGKRF+R +HL SH ++H++ + +IC+ C+R T Q
Sbjct: 353 HTGERPYPCETCGKRFTRQEHLRSHALSVHRSSRPIICKGCRRTFTSHLSQ 403
>ref|NP_082401.1| zinc finger and BTB domain-containing protein 46 isoform 2 [Mus
musculus].
Length = 434
Score = 146 bits (368), Expect = 5e-35
Identities = 90/225 (40%), Positives = 121/225 (53%), Gaps = 3/225 (1%)
Frame = +3
Query: 276 MEISSHQSHLLQQLNEQRRQDVFCDCNILVEGKVFKAHRNVLFASSGYFKMLLSQTSKET 455
MEI+SH HLL++LNEQR+ V CD ++VEGKVFKAH+NVL SS YFK L Q K +
Sbjct: 8 MEITSHYRHLLRELNEQRQHGVLCDACVVVEGKVFKAHKNVLLGSSRYFKTLYCQVQKTS 67
Query: 456 SQPTTATFQAFSPDTFTVILDFVYSGRLSLTGQNVIEVMSAASFLQMTDVISVCKTFIKS 635
Q T + F I+DF+YS L+LT +NVIEVMSAASFLQMTD++ C FIK+
Sbjct: 68 DQATVTHLDIVTAQGFKAIIDFMYSAHLALTSRNVIEVMSAASFLQMTDIVQACHDFIKA 127
Query: 636 SLDISEKEKDRYFSLSDKDASSNGIERSSFYSGGWQDESSSPRSHLSPDQGTGIISGKS- 812
+LDIS K DAS E S F E +P S+ + + +++G+S
Sbjct: 128 ALDISIK----------SDASD---ELSEF-------EIGTPASNSTEALISAVMAGRSI 167
Query: 813 --WSKYNYHPAPQRNTQQPLAKHEQRKESMKKSKHLRLSQPSETT 941
W PA + HE K+ + + P + +
Sbjct: 168 SPWLARRTSPANSSGDSAIASCHEGGSSYGKEDQEPKADGPDDVS 212
>ref|NP_081932.1| zinc finger and BTB domain-containing protein 46 isoform 1 [Mus
musculus].
Length = 600
Score = 146 bits (368), Expect = 5e-35
Identities = 90/225 (40%), Positives = 121/225 (53%), Gaps = 3/225 (1%)
Frame = +3
Query: 276 MEISSHQSHLLQQLNEQRRQDVFCDCNILVEGKVFKAHRNVLFASSGYFKMLLSQTSKET 455
MEI+SH HLL++LNEQR+ V CD ++VEGKVFKAH+NVL SS YFK L Q K +
Sbjct: 8 MEITSHYRHLLRELNEQRQHGVLCDACVVVEGKVFKAHKNVLLGSSRYFKTLYCQVQKTS 67
Query: 456 SQPTTATFQAFSPDTFTVILDFVYSGRLSLTGQNVIEVMSAASFLQMTDVISVCKTFIKS 635
Q T + F I+DF+YS L+LT +NVIEVMSAASFLQMTD++ C FIK+
Sbjct: 68 DQATVTHLDIVTAQGFKAIIDFMYSAHLALTSRNVIEVMSAASFLQMTDIVQACHDFIKA 127
Query: 636 SLDISEKEKDRYFSLSDKDASSNGIERSSFYSGGWQDESSSPRSHLSPDQGTGIISGKS- 812
+LDIS K DAS E S F E +P S+ + + +++G+S
Sbjct: 128 ALDISIK----------SDASD---ELSEF-------EIGTPASNSTEALISAVMAGRSI 167
Query: 813 --WSKYNYHPAPQRNTQQPLAKHEQRKESMKKSKHLRLSQPSETT 941
W PA + HE K+ + + P + +
Sbjct: 168 SPWLARRTSPANSSGDSAIASCHEGGSSYGKEDQEPKADGPDDVS 212
Score = 82.0 bits (201), Expect = 1e-15
Identities = 32/67 (47%), Positives = 44/67 (65%)
Frame = +3
Query: 1110 RMRFKCPYCTHVVKRKADLKRHLRCHTGERPYPCQACGKRFSRLDHLSSHFRTIHQACKL 1289
R +FKCPYC+ + LKRH+R HTGERPYPC+ CGK+F+R +H+ H + K
Sbjct: 415 RKKFKCPYCSFSAMHQCILKRHMRSHTGERPYPCEICGKKFTRREHMKRHTLVHSKDKKY 474
Query: 1290 ICRKCKR 1310
+C+ C R
Sbjct: 475 VCKVCSR 481
>ref|NP_808328.2| zinc finger and BTB domain containing 10 [Mus musculus].
Length = 861
Score = 124 bits (312), Expect = 1e-28
Identities = 62/127 (48%), Positives = 91/127 (71%), Gaps = 1/127 (0%)
Frame = +3
Query: 285 SSHQSHLLQQLNEQRRQDVFCDCNILVEGKVFKAHRNVLFASSGYFKMLLSQTSKET-SQ 461
+S+ LL+QL+EQR++D+ CD +I+V GK+FKAH+N+L A S +FK L ++KE+ +Q
Sbjct: 337 NSYCYQLLRQLDEQRKKDILCDVSIVVSGKIFKAHKNILVAGSRFFKTLYCVSNKESPNQ 396
Query: 462 PTTATFQAFSPDTFTVILDFVYSGRLSLTGQNVIEVMSAASFLQMTDVISVCKTFIKSSL 641
T + F+VILDF+YSG L LT QN IEVM+ AS+LQM++V+ C+ FIK +L
Sbjct: 397 NNTTHLDIAAVQGFSVILDFLYSGNLVLTSQNAIEVMTVASYLQMSEVVQTCRNFIKDAL 456
Query: 642 DISEKEK 662
+IS K +
Sbjct: 457 NISIKSE 463
Score = 63.9 bits (154), Expect = 3e-10
Identities = 26/65 (40%), Positives = 39/65 (60%)
Frame = +3
Query: 1116 RFKCPYCTHVVKRKADLKRHLRCHTGERPYPCQACGKRFSRLDHLSSHFRTIHQACKLIC 1295
+ KCP+C++V K + LKRHL H+G R + C+ CGK F+R +H+ H + K C
Sbjct: 713 KLKCPHCSYVAKYRRTLKRHLLIHSGVRSFKCEICGKMFTRREHVKRHSLVHKKDKKYKC 772
Query: 1296 RKCKR 1310
CK+
Sbjct: 773 MVCKK 777
>ref|NP_033567.2| zinc finger and BTB domain-containing protein 17 [Mus musculus].
Length = 794
Score = 120 bits (302), Expect = 2e-27
Identities = 96/369 (26%), Positives = 157/369 (42%), Gaps = 26/369 (7%)
Frame = +3
Query: 276 MEISSHQSHLLQQLNEQRRQDVFCDCNILVEGKVFKAHRNVLFASSGYFKMLLSQTSKET 455
M+ H +L+QLN+QR+ + CDC +V+G FKAH+ VL A S YFKML
Sbjct: 1 MDFPQHSQRVLEQLNQQRQLGLLCDCTFVVDGVDFKAHKAVLAACSEYFKMLF------V 54
Query: 456 SQPTTATFQAFSPDTFTVILDFVYSGRLSLTGQNVIEVMSAASFLQMTDVISVCKTFIKS 635
Q + +L+F+Y+ +LSL+ +NV +V++ ASFLQM D+++ C T +KS
Sbjct: 55 DQKDVVHLDISNAAGLGQVLEFMYTAKLSLSPENVDDVLAVASFLQMQDIVTACHT-LKS 113
Query: 636 SLDISEKEKDRYFSLS---------DKDASSNGIERSSFYSGGWQDESSSPRSHLSPDQG 788
+ S + + + D+ A++ + R G S+ P L ++G
Sbjct: 114 LAEPSSTTGESADASAVEGGDKRAKDEKAAATMLSRLDQARGS---SSTGPGRELKEERG 170
Query: 789 TGIISGKSWSKYNYHP-----------APQRNTQQPLAKHEQRKESMKKSKHLRLSQPSE 935
S S ++ P + A+ E ES ++ + + E
Sbjct: 171 GQAESASSGAEQTEKADAPREPPPVELKPDPTSSMAAAEAEALSESSEQEMEVEPASKGE 230
Query: 936 TTQYKSSKREARTXXXXXXXXXXEEQAQMDVEMDSTPVGYQYG-QGADVTSRSFPDDLPR 1112
Q + A T E + + E T G + G +G ++ S ++ D
Sbjct: 231 DGQEEEGAGPA-TVKEEGMHLDNGEPPEENEESAGTDSGQELGMEGQNLRSGTYGDRTES 289
Query: 1113 MRF-----KCPYCTHVVKRKADLKRHLRCHTGERPYPCQACGKRFSRLDHLSSHFRTIHQ 1277
+ KC C + KRH+R HTGE+P+ C+ C K FS +H +T
Sbjct: 290 KAYGSIIHKCEDCGKEFTHTGNFKRHIRIHTGEKPFSCRECSKAFSDPAACKAHEKTHSP 349
Query: 1278 ACKLICRKC 1304
C +C
Sbjct: 350 LKPYGCEEC 358
Score = 62.8 bits (151), Expect = 7e-10
Identities = 24/52 (46%), Positives = 34/52 (65%)
Frame = +3
Query: 1122 KCPYCTHVVKRKADLKRHLRCHTGERPYPCQACGKRFSRLDHLSSHFRTIHQ 1277
KC C+ DL +H+ HTGE+PY C CG+ F+R+D+L SH +T+HQ
Sbjct: 578 KCSVCSKAFVNVGDLSKHIIIHTGEKPYLCDKCGRGFNRVDNLRSHVKTVHQ 629
Score = 58.2 bits (139), Expect = 2e-08
Identities = 32/94 (34%), Positives = 44/94 (46%), Gaps = 11/94 (11%)
Frame = +3
Query: 1074 DVTSRSFPDDLPRMRF----------KCPYCTHVVKRKADLKRHLRCHTGERPYPCQACG 1223
D RSF D +MR KCP+C + +LK HL+ H + P C+ CG
Sbjct: 412 DYCGRSFSDPTSKMRHLETHDTDKEHKCPHCDKKFNQVGNLKAHLKIHIADGPLKCRECG 471
Query: 1224 KRFSRLDHLSSHFRTIHQACK-LICRKCKRHVTD 1322
K+F+ +L H R IH K +C C+R D
Sbjct: 472 KQFTTSGNLKRHLR-IHSGEKPYVCTHCQRQFAD 504
Score = 53.1 bits (126), Expect = 5e-07
Identities = 29/68 (42%), Positives = 39/68 (57%), Gaps = 5/68 (7%)
Frame = +3
Query: 1128 PY-CTHVVKRKAD---LKRHLRCHTGERPYPCQACGKRFSRLDHLSSHFRTIHQACKLIC 1295
PY CTH ++ AD L+RH+R HTGE+P C CGK F++ L +H R +C
Sbjct: 492 PYVCTHCQRQFADPGALQRHVRIHTGEKPCQCVICGKAFTQASSLIAHVRQHTGEKPYVC 551
Query: 1296 RKC-KRHV 1316
+C KR V
Sbjct: 552 ERCGKRFV 559
Score = 52.8 bits (125), Expect = 7e-07
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Frame = +3
Query: 1122 KCPYCTHVVKRKADLKRHLRCHTGERPYPCQACGKRFSRLDHLSSHFR---TIHQACKLI 1292
+C C + + L H+R HTGE+PY C+ CGKRF + L++H R I +
Sbjct: 522 QCVICGKAFTQASSLIAHVRQHTGEKPYVCERCGKRFVQSSQLANHIRHHDNIRPHKCSV 581
Query: 1293 CRKCKRHVTDLTGQVV 1340
C K +V DL+ ++
Sbjct: 582 CSKAFVNVGDLSKHII 597
>ref|NP_085034.2| myoneurin [Mus musculus].
Length = 610
Score = 107 bits (267), Expect = 2e-23
Identities = 100/406 (24%), Positives = 160/406 (39%), Gaps = 61/406 (15%)
Frame = +3
Query: 276 MEISSHQSHLLQQLNEQRRQDVFCDCNILVEGKVFKAHRNVLFASSGYFKMLLSQTSKET 455
M+ S H HLL++LN+QR CDC +++ FKAHRNVL + S YF + TS+
Sbjct: 1 MQYSHHCEHLLERLNKQREAGFLCDCTVVIGEFQFKAHRNVLASFSEYFGAIYRSTSENN 60
Query: 456 SQPTTATFQAFSPDTFTVILDFVYSGRLSLTGQNVIEVMSAASFLQMTDVISVCKTFIKS 635
+ +A D F +L+F+Y+G L+L NV E+ AA +L++ +V++ CK IK
Sbjct: 61 VFLDQSQVKA---DGFQKLLEFIYTGTLNLDSWNVKEIHQAADYLKVEEVVTKCK--IK- 114
Query: 636 SLDISEKEKDRYFSLSDKDASSNGIERSSFYSGGWQDESSSPRSHLSPDQGTGIISGKSW 815
+E +F + E SS ++ +Q +++ + +
Sbjct: 115 ------------------------MEDFAFIASPSSTEISSITGNIELNQQACLLTLRDY 150
Query: 816 SKYNYHPAPQRNTQ---QPLAKHEQRKESMKKSKHLRLSQP--SETTQYKSSKREARTXX 980
+ + Q +P A ++ +S KK K +P S+ QY S E+ +
Sbjct: 151 NNREKSEVSTDSVQANPKPRALTKKSSQSKKKKKAFSSQKPGQSKAVQYPSDVLESASV- 209
Query: 981 XXXXXXXXEEQAQMDVEMDSTPVGYQYGQGAD--------VTSRSFPDD-------LPRM 1115
+ ++ S+PV Q QG D V +FP + R
Sbjct: 210 ----------ELFLETSKLSSPVVEQIIQGNDSSELELTSVVENTFPTQDIVQTVTVKRK 259
Query: 1116 RFK-----------------------------------------CPYCTHVVKRKADLKR 1172
R K C C V + L+R
Sbjct: 260 RRKSQSHCALKEHSMSNIASVKSPYELENAGEELDARFSKAKPMCNTCGKVFSEASSLRR 319
Query: 1173 HLRCHTGERPYPCQACGKRFSRLDHLSSHFRTIHQACKLICRKCKR 1310
H+R H G +PY C CGK F++ + L +H RT C C +
Sbjct: 320 HMRIHKGVKPYVCHLCGKAFTQCNQLKTHVRTHTGERPYKCELCDK 365
Score = 51.2 bits (121), Expect = 2e-06
Identities = 25/69 (36%), Positives = 31/69 (44%)
Frame = +3
Query: 1119 FKCPYCTHVVKRKADLKRHLRCHTGERPYPCQACGKRFSRLDHLSSHFRTIHQACKLICR 1298
+ C C + L H R HTGE+PY C CGK F L+ HFR+ IC
Sbjct: 443 YVCDTCGKAFAVSSSLITHSRKHTGEKPYICGICGKSFISSGELNKHFRSHTGERPFICE 502
Query: 1299 KCKRHVTDL 1325
C TD+
Sbjct: 503 LCGNSYTDI 511
Score = 50.8 bits (120), Expect = 3e-06
Identities = 22/62 (35%), Positives = 32/62 (51%)
Frame = +3
Query: 1119 FKCPYCTHVVKRKADLKRHLRCHTGERPYPCQACGKRFSRLDHLSSHFRTIHQACKLICR 1298
+KC C ++LK H R H+GE+PY C CG+RF++ L+ H R +C
Sbjct: 387 YKCDVCNLQFATSSNLKIHARKHSGEKPYVCDRCGQRFAQASTLTYHVRRHTGEKPYVCD 446
Query: 1299 KC 1304
C
Sbjct: 447 TC 448
>ref|NP_033573.1| zinc finger protein 161 [Mus musculus].
Length = 449
Score = 104 bits (260), Expect = 2e-22
Identities = 96/368 (26%), Positives = 153/368 (41%), Gaps = 28/368 (7%)
Frame = +3
Query: 291 HQSHLLQQLNEQRRQDVFCDCNILVEGKVFKAHRNVLFASSGYFKMLLSQTSKETSQPTT 470
H++ L+ LNEQR + FCD I+VE F+AHR VL A S YFK L + ++S
Sbjct: 18 HKTLFLKTLNEQRLEGEFCDIAIVVEDVKFRAHRCVLAACSTYFKKLFKKLEVDSSSVIE 77
Query: 471 ATFQAFSPDTFTVILDFVYSGRLSLTGQNVIEVMSAASFLQMTDVISVC--KTFIKSSLD 644
F D F +L+++Y+ ++S+ ++V +MS+ L + + +C K + S +
Sbjct: 78 IDF--LRSDIFEEVLNYMYTAKISVKKEDVNLMMSSGQILGIRFLDKLCSQKRDVSSPDE 135
Query: 645 ISEKEKDRYFSLSDK------DASSNGIERSSFYSGGWQDESSSPRSHLSPDQGTGIISG 806
+ + K +Y ++ DA + +E D+ SP G
Sbjct: 136 SNGQSKSKYCLKLNRPIGDAADAQDDDVEEIG-------DQDDSPSDDTVEGTPPSQEDG 188
Query: 807 KSWSKYNYHPAPQRNTQQPLAKHEQRKESMKKSKHLRLSQPSETTQYK---SSKREARTX 977
KS P Q+ + K +E K + + + + ET + K S +A T
Sbjct: 189 KS-------PTTTLRVQEAILKELGSEEVRKVNCYGQEVESMETPESKDLGSQTPQALTF 241
Query: 978 XXXXXXXXXEEQ-----AQMDVEMDSTPVGYQYGQGA-DVTSRSFPDDLPRMR------- 1118
E+ A D++ + G+ Q A ++F D+ R+R
Sbjct: 242 NDGMSEVKDEQTPGWTTAASDMKFEYLLYGHHREQIACQACGKTFSDE-GRLRKHEKLHT 300
Query: 1119 ----FKCPYCTHVVKRKADLKRHLRCHTGERPYPCQACGKRFSRLDHLSSHFRTIHQACK 1286
F C CT +A LK HL+ HTG +PY C+ CGK F R L H R
Sbjct: 301 ADRPFVCEMCTKGFTTQAHLKEHLKIHTGYKPYSCEVCGKSFIRAPDLKKHERVHSNERP 360
Query: 1287 LICRKCKR 1310
C C +
Sbjct: 361 FACHMCDK 368
>ref|NP_700447.2| zinc finger and BTB domain-containing protein 24 [Mus musculus].
Length = 710
Score = 100 bits (249), Expect = 3e-21
Identities = 87/362 (24%), Positives = 149/362 (41%), Gaps = 38/362 (10%)
Frame = +3
Query: 288 SHQSHLLQQLNEQRRQDVFCDCNILVEGKVFKAHRNVLFASSGYFKMLLSQTSKETSQPT 467
+H +L L +QR++ CD ++VE F+AH+ +L ASS YF M+ ++ E Q +
Sbjct: 18 THSDTVLASLEDQRKKGFLCDITLIVENVHFRAHKALLAASSEYFSMMFAEEG-EIGQ-S 75
Query: 468 TATFQAFSPDTFTVILDFVYSGRLSLTGQNVIEVMSAASFLQMTDVISVCKTFIKSS--- 638
+ DTF ++L+F+Y+G L + + ++++ A FL++ D++ F +
Sbjct: 76 IYMLEGMVADTFGILLEFIYTGYLHASEKTTEQILATAQFLKVYDLVKAYADFQDNHSAP 135
Query: 639 ------------LDISEKEKDRYFSLSDKDASSNGIE--RSSFYSGG------------- 737
+ IS K+ D + +NG++ RS + G
Sbjct: 136 KPPALNCTGTPVVVISNKKNDPLKRKRGRPRKANGLQEGRSELAAEGELQLRVNNSVQNR 195
Query: 738 ----WQDESSSPRSHLSPDQGTGIISGKSWSKYNYHPAPQRNTQQPLAKHEQRKESMKKS 905
+++E S S +P+ +G+ S PA + P A Q ES +
Sbjct: 196 QNFVFKEEDSVKLSEQTPEDKESEPAGEPGSVEEV-PAEKDENFDPKAGDGQ--ESQSRC 252
Query: 906 KHLRLSQPSETTQYKSSKREARTXXXXXXXXXXEEQAQMDVEMDSTPVGYQYGQGADVTS 1085
R+ + + YK E + + + ++Y +
Sbjct: 253 SRRRIRRSVKLKDYKLLGDEDDQSTAKRLCGRKKRSSGPEARCKDCDRVFKYSHFLAIHQ 312
Query: 1086 RSFPDDLPRMRFKCPYCTHVVKRKADLKRHLRCHTGERPYPCQACGK----RFSRLDHLS 1253
R + P FKC C +K L+ H R HTGERPY C CGK + S L+H+S
Sbjct: 313 RRHTGERP---FKCNECGKGFAQKHSLQVHTRMHTGERPYTCTVCGKALTTKHSLLEHMS 369
Query: 1254 SH 1259
H
Sbjct: 370 LH 371
Score = 55.8 bits (133), Expect = 8e-08
Identities = 29/66 (43%), Positives = 39/66 (59%), Gaps = 7/66 (10%)
Frame = +3
Query: 1128 PYCTHVVKRKAD---LKRHLRCHTGERPYPCQACGKRFSRLDHLSSHFRTIHQACK---- 1286
P C+H ++ D LK+HLR HTGE+P+ C+ CGK F+ L +H R IH+ K
Sbjct: 405 PECSHCHRKFMDVSQLKKHLRTHTGEKPFTCEICGKSFTAKSSLQTHIR-IHRGEKPYSC 463
Query: 1287 LICRKC 1304
IC KC
Sbjct: 464 SICGKC 469
>ref|NP_031554.1| B-cell CLL/lymphoma 6 member B protein [Mus musculus].
Length = 474
Score = 99.0 bits (245), Expect = 8e-21
Identities = 99/386 (25%), Positives = 153/386 (39%), Gaps = 44/386 (11%)
Frame = +3
Query: 279 EISSHQSHLLQQLNEQRRQDVFCDCNILVEGKVFKAHRNVLFASSGYFKMLLSQTS---- 446
E + H S +L LNE R + + D +LV G+ +AH+ VL A SG+F + +
Sbjct: 16 EFTRHSSDVLSNLNELRLRGILTDVTLLVGGQPLRAHKAVLIACSGFFYSIFRGRAGLGV 75
Query: 447 KETSQPTTATFQAFSPDTFTVILDFVYSGRLSLTGQNVIEVMSAASFLQMTDVISVCKTF 626
S P + F+P +LDF+Y+ RL L+ V++AA++LQM V+ C F
Sbjct: 76 DVLSLPGGPEARGFAP-----LLDFMYTSRLRLSPATAPAVLAAATYLQMEHVVQACHRF 130
Query: 627 IKSS---LDISEKEKDRYFSLSDKDASSNGIERSSFYSGGWQDESSSPR--SHLSPDQGT 791
I++S L IS + + A RS G D + R S SP +
Sbjct: 131 IQASYEPLGISLRPVEVEPPRPPTVAPPGSPRRSE----GHPDPPTESRSCSQGSPSPAS 186
Query: 792 GIISGKSWSKYNY-------------------HPAPQR---NTQQPLAKHEQRKESMKKS 905
+W KY + P PQ + + + +E
Sbjct: 187 PDPKACNWKKYKFIVLNSQTSQAGSLVGESSGQPCPQARLPSGDEACSSSSSSEEGTTPG 246
Query: 906 KHLRLSQPSETTQYKSSKREARTXXXXXXXXXXEEQAQMDVEMDSTPVGYQY-------- 1061
RLS + T ++K A +E + + + P G ++
Sbjct: 247 LQSRLSLATTTARFKCG---ALANNSYLFTPRAQETSLPASKQANPPPGSEFFSCQNCEA 303
Query: 1062 ----GQGADVTSRSFPDDLPRMRFKCPYCTHVVKRKADLKRHLRCHTGERPYPCQACGKR 1229
G ++ + +D P +KC C + K +L H HTGE+PY C CG R
Sbjct: 304 VAGCSSGLELLAPG-DEDKP---YKCQLCRSAFRYKGNLASHRTVHTGEKPYRCSICGAR 359
Query: 1230 FSRLDHLSSHFRTIHQACK-LICRKC 1304
F+R +L +H R IH K C C
Sbjct: 360 FNRPANLKTHSR-IHSGEKPYKCETC 384
Score = 55.1 bits (131), Expect = 1e-07
Identities = 29/66 (43%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +3
Query: 1119 FKCPYCTHVVKRKADLKRHLRCHTGERPYPCQACGKRFSRLDHLSSHFRTIHQACK-LIC 1295
+KC C + A L+ H+ HTGE+PYPC CG RF L L SH R IH K C
Sbjct: 379 YKCETCGSRFVQVAHLRAHVLIHTGEKPYPCPTCGTRFRHLQTLKSHVR-IHTGEKPYHC 437
Query: 1296 RKCKRH 1313
C H
Sbjct: 438 DPCGLH 443
Score = 54.7 bits (130), Expect = 2e-07
Identities = 21/47 (44%), Positives = 30/47 (63%)
Frame = +3
Query: 1119 FKCPYCTHVVKRKADLKRHLRCHTGERPYPCQACGKRFSRLDHLSSH 1259
++C C R A+LK H R H+GE+PY C+ CG RF ++ HL +H
Sbjct: 351 YRCSICGARFNRPANLKTHSRIHSGEKPYKCETCGSRFVQVAHLRAH 397
Score = 50.1 bits (118), Expect = 4e-06
Identities = 22/54 (40%), Positives = 26/54 (48%)
Frame = +3
Query: 1119 FKCPYCTHVVKRKADLKRHLRCHTGERPYPCQACGKRFSRLDHLSSHFRTIHQA 1280
+ CP C + LK H+R HTGE+PY C CG F L H R H A
Sbjct: 407 YPCPTCGTRFRHLQTLKSHVRIHTGEKPYHCDPCGLHFRHKSQLRLHLRQKHGA 460
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 44,311,529
Number of extensions: 1114918
Number of successful extensions: 11948
Number of sequences better than 1.0e-05: 753
Number of HSP's gapped: 11121
Number of HSP's successfully gapped: 2939
Length of query: 480
Length of database: 15,617,559
Length adjustment: 105
Effective length of query: 375
Effective length of database: 12,463,779
Effective search space: 4673917125
Effective search space used: 4673917125
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-004239
(1442 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_003356337.1| PREDICTED: zinc finger and BTB domain-contai... 706 0.0
Alignment gi|XP_003356336.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger ... 163 2e-40
Alignment gi|XP_001928312.1| PREDICTED: zinc finger and BTB domain-contai... 123 2e-28
Alignment gi|XP_001928318.1| PREDICTED: zinc finger and BTB domain-contai... 123 2e-28
Alignment gi|XP_003360604.1| PREDICTED: zinc finger and BTB domain-contai... 116 3e-26
Alignment gi|XP_003358718.1| PREDICTED: myoneurin isoform 2 [Sus scrofa]. 101 1e-21
Alignment gi|XP_003358717.1| PREDICTED: myoneurin isoform 1 [Sus scrofa]. 101 1e-21
Alignment gi|XP_003128899.1| PREDICTED: zinc finger and BTB domain-contai... 93 3e-19
Alignment gi|XP_003357696.1| PREDICTED: zinc finger protein 238-like [Sus... 92 7e-19
Alignment gi|XP_003353866.1| PREDICTED: zinc finger and BTB domain-contai... 89 8e-18
>ref|XP_003356337.1| PREDICTED: zinc finger and BTB domain-containing protein 8A-like [Sus
scrofa].
Length = 441
Score = 706 bits (1823), Expect(2) = 0.0
Identities = 348/359 (96%), Positives = 348/359 (96%)
Frame = +3
Query: 276 MEISSHQSHLLQQLNEQRRQDVFCDCNILVEGKVFKAHRNVLFASSGYFKMLLSQTSKET 455
MEISSHQSHLLQQLNEQRRQDVFCDCNILVEGKVFKAHRNVLFASSGYFKMLLSQTSKET
Sbjct: 1 MEISSHQSHLLQQLNEQRRQDVFCDCNILVEGKVFKAHRNVLFASSGYFKMLLSQTSKET 60
Query: 456 SQPTTATFQAFSPDTFTVILDFVYSGRLSLTGQNVIEVMSAASFLQMTDVISVCKTFIKS 635
SQPTTATFQAFSPDTFTVILDFVYSGRLSLTGQNVIEVMSAASFLQMTDVISVCKTFIKS
Sbjct: 61 SQPTTATFQAFSPDTFTVILDFVYSGRLSLTGQNVIEVMSAASFLQMTDVISVCKTFIKS 120
Query: 636 SLDISEKEKDRYFSLSDKDASSNGIERSSFYSGGWQDESSSPRSHLSPDQGTGIISGKSW 815
SLDISEKEKDRYFSLSDKDASSNGIERSSFYSGGWQDESSSPRSHLSPDQGTGIISGKSW
Sbjct: 121 SLDISEKEKDRYFSLSDKDASSNGIERSSFYSGGWQDESSSPRSHLSPDQGTGIISGKSW 180
Query: 816 SKYNYHPAPQRNTQQPLAKHEQRKESMKKSKHLRLSQPSETTQYKSSKREARTXXXXXXX 995
SKYNYHPAPQRNTQQPLAKHEQRKESMKKSKHLRLSQPSETTQYKSSKREART
Sbjct: 181 SKYNYHPAPQRNTQQPLAKHEQRKESMKKSKHLRLSQPSETTQYKSSKREARTSDSSSHI 240
Query: 996 XXXEEQAQMDVEMDSTPVGYQYGQGADVTSRSFPDDLPRMRFKCPYCTHVVKRKADLKRH 1175
EEQAQMDVEMDSTPVGYQYGQGADVTSRSFPDDLPRMRFKCPYCTHVVKRKADLKRH
Sbjct: 241 SQSEEQAQMDVEMDSTPVGYQYGQGADVTSRSFPDDLPRMRFKCPYCTHVVKRKADLKRH 300
Query: 1176 LRCHTGERPYPCQACGKRFSRLDHLSSHFRTIHQACKLICRKCKRHVTDLTGQVVXEGT 1352
LRCHTGERPYPCQACGKRFSRLDHLSSHFRTIHQACKLICRKCKRHVTDLTGQVV EGT
Sbjct: 301 LRCHTGERPYPCQACGKRFSRLDHLSSHFRTIHQACKLICRKCKRHVTDLTGQVVQEGT 359
Score = 56.6 bits (135), Expect(2) = 0.0
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = +2
Query: 1364 LCNECLAEVGIDSLPIDLEAEQHLMS 1441
LCNECLAEVGIDSLPIDLEAEQHLMS
Sbjct: 364 LCNECLAEVGIDSLPIDLEAEQHLMS 389
>ref|XP_003356336.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger and BTB
domain-containing protein 8B-like [Sus scrofa].
Length = 493
Score = 163 bits (413), Expect = 2e-40
Identities = 86/181 (47%), Positives = 123/181 (67%), Gaps = 10/181 (5%)
Frame = +3
Query: 276 MEISSHQSHLLQQLNEQRRQDVFCDCNILVEGKVFKAHRNVLFASSGYFKMLLSQTSKET 455
ME+ S+ S LL +LNEQR++D FCDC+I+VEG++FKAHRN+LFA+SGYF+ LL +++
Sbjct: 1 MEMQSYYSKLLGELNEQRQRDFFCDCSIIVEGRIFKAHRNILFANSGYFRALLIHYIQDS 60
Query: 456 SQPTTATFQAFSPDTFTVILDFVYSGRLSLTGQNVIEVMSAASFLQMTDVISVCKTFIKS 635
+ +TA+ + D F+ ILDF+YSG+L L G+NVIEVMSAAS+LQM DV++ CKT+I+S
Sbjct: 61 GRHSTASLDIVTSDAFSTILDFLYSGKLDLCGENVIEVMSAASYLQMNDVVNFCKTYIRS 120
Query: 636 SLDISEK-EKDRYFSLSDKDASSNGIER---------SSFYSGGWQDESSSPRSHLSPDQ 785
SLDI K EK+ + + A++ S S G + S P+S +SP +
Sbjct: 121 SLDICRKIEKEAAVAAAVAAAAAAAAAAAAAAAHQVDSGSTSSGREGTSGDPKSLVSPAE 180
Query: 786 G 788
G
Sbjct: 181 G 181
Score = 90.5 bits (223), Expect = 2e-18
Identities = 38/78 (48%), Positives = 54/78 (69%), Gaps = 1/78 (1%)
Frame = +3
Query: 1104 LPRMRFKCPYCTHVVKRKADLKRHLRCHTGERPYPCQACGKRFSRLDHLSSHFRTIHQAC 1283
+P KCP+C + K+K LKRH+R HTGERPYPC+ CGKRF+R +HL SH ++H++
Sbjct: 335 VPIKLHKCPFCPYTAKQKGILKRHIRSHTGERPYPCETCGKRFTRQEHLRSHALSVHRSN 394
Query: 1284 K-LICRKCKRHVTDLTGQ 1334
+ +IC+ C+R T Q
Sbjct: 395 RPIICKGCRRTFTSHLSQ 412
>ref|XP_001928312.1| PREDICTED: zinc finger and BTB domain-containing protein 10 isoform
1 [Sus scrofa].
Length = 873
Score = 123 bits (309), Expect = 2e-28
Identities = 62/127 (48%), Positives = 90/127 (70%), Gaps = 1/127 (0%)
Frame = +3
Query: 285 SSHQSHLLQQLNEQRRQDVFCDCNILVEGKVFKAHRNVLFASSGYFKMLLSQTSKET-SQ 461
+S+ LL+QLNEQR++ + CD +I+V GK+FKAH+N+L A S +FK L ++KE+ +Q
Sbjct: 346 NSYCYQLLRQLNEQRKKGILCDVSIVVSGKIFKAHKNILVAGSRFFKTLYCFSNKESPNQ 405
Query: 462 PTTATFQAFSPDTFTVILDFVYSGRLSLTGQNVIEVMSAASFLQMTDVISVCKTFIKSSL 641
T + F+VILDF+YSG L LT QN IEVM+ AS+LQM++V+ C+ FIK +L
Sbjct: 406 NNTTHLDIAAVQGFSVILDFLYSGNLVLTSQNAIEVMTVASYLQMSEVVQTCRNFIKDAL 465
Query: 642 DISEKEK 662
+IS K +
Sbjct: 466 NISIKSE 472
Score = 64.3 bits (155), Expect = 2e-10
Identities = 27/65 (41%), Positives = 38/65 (58%)
Frame = +3
Query: 1116 RFKCPYCTHVVKRKADLKRHLRCHTGERPYPCQACGKRFSRLDHLSSHFRTIHQACKLIC 1295
+ KCP+C++V K + LKRHL HTG R + C CGK F+R +H+ H + K C
Sbjct: 723 KLKCPHCSYVAKYRRTLKRHLLIHTGVRSFSCDICGKLFTRREHVKRHSLVHKKDKKYKC 782
Query: 1296 RKCKR 1310
CK+
Sbjct: 783 MVCKK 787
>ref|XP_001928318.1| PREDICTED: zinc finger and BTB domain-containing protein 10 isoform
2 [Sus scrofa].
Length = 849
Score = 123 bits (309), Expect = 2e-28
Identities = 62/127 (48%), Positives = 90/127 (70%), Gaps = 1/127 (0%)
Frame = +3
Query: 285 SSHQSHLLQQLNEQRRQDVFCDCNILVEGKVFKAHRNVLFASSGYFKMLLSQTSKET-SQ 461
+S+ LL+QLNEQR++ + CD +I+V GK+FKAH+N+L A S +FK L ++KE+ +Q
Sbjct: 346 NSYCYQLLRQLNEQRKKGILCDVSIVVSGKIFKAHKNILVAGSRFFKTLYCFSNKESPNQ 405
Query: 462 PTTATFQAFSPDTFTVILDFVYSGRLSLTGQNVIEVMSAASFLQMTDVISVCKTFIKSSL 641
T + F+VILDF+YSG L LT QN IEVM+ AS+LQM++V+ C+ FIK +L
Sbjct: 406 NNTTHLDIAAVQGFSVILDFLYSGNLVLTSQNAIEVMTVASYLQMSEVVQTCRNFIKDAL 465
Query: 642 DISEKEK 662
+IS K +
Sbjct: 466 NISIKSE 472
Score = 64.3 bits (155), Expect = 2e-10
Identities = 27/65 (41%), Positives = 38/65 (58%)
Frame = +3
Query: 1116 RFKCPYCTHVVKRKADLKRHLRCHTGERPYPCQACGKRFSRLDHLSSHFRTIHQACKLIC 1295
+ KCP+C++V K + LKRHL HTG R + C CGK F+R +H+ H + K C
Sbjct: 699 KLKCPHCSYVAKYRRTLKRHLLIHTGVRSFSCDICGKLFTRREHVKRHSLVHKKDKKYKC 758
Query: 1296 RKCKR 1310
CK+
Sbjct: 759 MVCKK 763
>ref|XP_003360604.1| PREDICTED: zinc finger and BTB domain-containing protein 17 [Sus
scrofa].
Length = 744
Score = 116 bits (291), Expect = 3e-26
Identities = 95/374 (25%), Positives = 159/374 (42%), Gaps = 46/374 (12%)
Frame = +3
Query: 276 MEISSHQSHLLQQLNEQRRQDVFCDCNILVEGKVFKAHRNVLFASSGYFKMLLSQTSKET 455
M+ H H+L+QLN+QR+ + CDC +V+G FKAH+ VL A S YFKML
Sbjct: 1 MDFPQHSQHVLEQLNQQRQLGLLCDCTFVVDGVDFKAHKAVLAACSEYFKMLF------V 54
Query: 456 SQPTTATFQAFSPDTFTVILDFVYSGRLSLTGQNVIEVMSAASFLQMTDVISVC------ 617
Q + +L+F+Y+ +LSL+ +NV +V++ ASFLQM ++I+ C
Sbjct: 55 DQKDVVHLDISNAAGLGQVLEFMYTAKLSLSSENVDDVLAVASFLQMQEIITACHALKSL 114
Query: 618 --------KTFIKSSLDISEK----EKDRYFSLSDKDAS--------------SNGIERS 719
++ S++++ +K EK +LS+ D + G +
Sbjct: 115 AERATSPGESVEASAVEVGDKRAKEEKAAASTLSELDPARSSPPTGPGREPKEERGGQAE 174
Query: 720 SFYSGGWQDESSS-----PRSHLSPDQGTGIISGKSWSKYNYHPAPQRNTQQPLAKHEQR 884
S SG Q E + P L PD +G+ + ++ + + + + EQ
Sbjct: 175 SMASGAEQTEKADAPREPPPVELKPDPTSGMAAAEAEAALSESSEQEMEVEPARKGEEQD 234
Query: 885 KESMKKSKHLRLSQPSETTQY-KSSKREARTXXXXXXXXXXEEQAQMDVEMDSTPVG-YQ 1058
+E + P E + + S+ A T + P G +
Sbjct: 235 EEGAVPAAVKEEGPPLEKGEAPEESEESASTDSGQELGAEARGLRSGTYGLWQGPYGCEE 294
Query: 1059 YGQG---ADVTSRSFPDDLPRMRFKCPYCTHVVKRKADLKRHLRCHTGERPYPCQACGKR 1229
G+G + + R++C C + +LKRH H+GE+PY C CG+
Sbjct: 295 CGKGYRLISLLNLHKKRHSGEARYRCEDCGKLFTTSGNLKRHQLVHSGEKPYQCDYCGRS 354
Query: 1230 F----SRLDHLSSH 1259
F S++ HL +H
Sbjct: 355 FSDPTSKMRHLETH 368
Score = 62.8 bits (151), Expect = 5e-10
Identities = 24/52 (46%), Positives = 34/52 (65%)
Frame = +3
Query: 1122 KCPYCTHVVKRKADLKRHLRCHTGERPYPCQACGKRFSRLDHLSSHFRTIHQ 1277
KC C+ DL +H+ HTGE+PY C CG+ F+R+D+L SH +T+HQ
Sbjct: 528 KCSVCSKAFVNVGDLSKHIIIHTGEKPYLCDKCGRGFNRVDNLRSHVKTVHQ 579
Score = 52.8 bits (125), Expect = 5e-07
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Frame = +3
Query: 1122 KCPYCTHVVKRKADLKRHLRCHTGERPYPCQACGKRFSRLDHLSSHFR---TIHQACKLI 1292
+C C + + L H+R HTGE+PY C+ CGKRF + L++H R I +
Sbjct: 472 QCVMCGKAFTQASSLIAHVRQHTGEKPYVCERCGKRFVQSSQLANHIRHHDNIRPHKCSV 531
Query: 1293 CRKCKRHVTDLTGQVV 1340
C K +V DL+ ++
Sbjct: 532 CSKAFVNVGDLSKHII 547
Score = 52.0 bits (123), Expect = 8e-07
Identities = 30/90 (33%), Positives = 42/90 (46%), Gaps = 11/90 (12%)
Frame = +3
Query: 1074 DVTSRSFPDDLPRMRF----------KCPYCTHVVKRKADLKRHLRCHTGERPYPCQACG 1223
D RSF D +MR KCP+C + +LK HL+ H + P C+ G
Sbjct: 349 DYCGRSFSDPTSKMRHLETHDTDKEHKCPHCDKKFNQVGNLKAHLKIHIADGPLKCRESG 408
Query: 1224 KRFSRLDHLSSHFRTIHQACK-LICRKCKR 1310
K+F+ +L H R IH K +C C+R
Sbjct: 409 KQFTATGNLKRHLR-IHSGEKPYVCVHCQR 437
>ref|XP_003358718.1| PREDICTED: myoneurin isoform 2 [Sus scrofa].
Length = 609
Score = 101 bits (251), Expect = 1e-21
Identities = 101/405 (24%), Positives = 161/405 (39%), Gaps = 60/405 (14%)
Frame = +3
Query: 276 MEISSHQSHLLQQLNEQRRQDVFCDCNILVEGKVFKAHRNVLFASSGYFKMLLSQTSKET 455
M+ S H HLL++LN+QR CDC I++ FKAHRNVL + S YF + TS+
Sbjct: 1 MQYSHHCEHLLERLNKQREAGFLCDCTIVIGEFQFKAHRNVLASFSEYFGAIYRSTSENN 60
Query: 456 SQPTTATFQAFSPDTFTVILDFVYSGRLSLTGQNVIEVMSAASFLQMTDVISVCKTFIKS 635
+ +A D F +L+F+Y+G L+L NV E+ AA +L++ +V++ CK IK
Sbjct: 61 VFLDQSQVKA---DGFQKLLEFIYTGTLNLDSWNVKEIHQAADYLKVEEVVTKCK--IK- 114
Query: 636 SLDISEKEKDRYFSLSDKDASSNGIERSSFYSGGWQDESSSPRSHLSPDQGTGIISGKSW 815
+E +F + E SS ++ +Q T +++ + +
Sbjct: 115 ------------------------MEDFAFIANPSSTEISSITGNIELNQQTCLLTLRDY 150
Query: 816 SKYNYHPAP----QRNTQQ-PLAKHEQRKESMKKSKHLRLSQPSETTQYKSSKREARTXX 980
+ Q N +Q LAK + + KK+ + + ++ ++T QY S E +
Sbjct: 151 NSREKSEVSTDLVQANPKQGALAKKSSQTKKKKKAFNSQKTRQNKTVQYPSDILENTSV- 209
Query: 981 XXXXXXXXEEQAQMDVEMDSTPVGYQYGQG-------ADVTSRSFPDD-------LPRMR 1118
+ +D STP+ Q Q V +FP + R R
Sbjct: 210 ----------ELFLDANKLSTPIIEQVVQRNNSELELTSVVENTFPAQDIVQTVTVKRKR 259
Query: 1119 FK----CPYCTHVVKRKADLK-------------------------------------RH 1175
K C H + A +K RH
Sbjct: 260 GKSQPNCALKEHSMSNIATVKNSYELESSGEELDQRYSKAKPMCNTCGKVFSEASSLRRH 319
Query: 1176 LRCHTGERPYPCQACGKRFSRLDHLSSHFRTIHQACKLICRKCKR 1310
+R H G +PY C CGK F++ + L +H RT C C +
Sbjct: 320 MRIHKGVKPYVCHLCGKAFTQCNQLKTHVRTHTGEKPYKCELCDK 364
Score = 51.2 bits (121), Expect = 1e-06
Identities = 25/69 (36%), Positives = 31/69 (44%)
Frame = +3
Query: 1119 FKCPYCTHVVKRKADLKRHLRCHTGERPYPCQACGKRFSRLDHLSSHFRTIHQACKLICR 1298
+ C C + L H R HTGE+PY C CGK F L+ HFR+ IC
Sbjct: 442 YVCDTCGKAFAVSSSLITHSRKHTGEKPYICGICGKSFISSGELNKHFRSHTGERPFICE 501
Query: 1299 KCKRHVTDL 1325
C TD+
Sbjct: 502 LCGNSYTDI 510
Score = 50.8 bits (120), Expect = 2e-06
Identities = 22/62 (35%), Positives = 32/62 (51%)
Frame = +3
Query: 1119 FKCPYCTHVVKRKADLKRHLRCHTGERPYPCQACGKRFSRLDHLSSHFRTIHQACKLICR 1298
+KC C ++LK H R H+GE+PY C CG+RF++ L+ H R +C
Sbjct: 386 YKCDVCNLQFATSSNLKIHARKHSGEKPYVCDRCGQRFAQASTLTYHVRRHTGEKPYVCD 445
Query: 1299 KC 1304
C
Sbjct: 446 TC 447
>ref|XP_003358717.1| PREDICTED: myoneurin isoform 1 [Sus scrofa].
Length = 609
Score = 101 bits (251), Expect = 1e-21
Identities = 101/405 (24%), Positives = 161/405 (39%), Gaps = 60/405 (14%)
Frame = +3
Query: 276 MEISSHQSHLLQQLNEQRRQDVFCDCNILVEGKVFKAHRNVLFASSGYFKMLLSQTSKET 455
M+ S H HLL++LN+QR CDC I++ FKAHRNVL + S YF + TS+
Sbjct: 1 MQYSHHCEHLLERLNKQREAGFLCDCTIVIGEFQFKAHRNVLASFSEYFGAIYRSTSENN 60
Query: 456 SQPTTATFQAFSPDTFTVILDFVYSGRLSLTGQNVIEVMSAASFLQMTDVISVCKTFIKS 635
+ +A D F +L+F+Y+G L+L NV E+ AA +L++ +V++ CK IK
Sbjct: 61 VFLDQSQVKA---DGFQKLLEFIYTGTLNLDSWNVKEIHQAADYLKVEEVVTKCK--IK- 114
Query: 636 SLDISEKEKDRYFSLSDKDASSNGIERSSFYSGGWQDESSSPRSHLSPDQGTGIISGKSW 815
+E +F + E SS ++ +Q T +++ + +
Sbjct: 115 ------------------------MEDFAFIANPSSTEISSITGNIELNQQTCLLTLRDY 150
Query: 816 SKYNYHPAP----QRNTQQ-PLAKHEQRKESMKKSKHLRLSQPSETTQYKSSKREARTXX 980
+ Q N +Q LAK + + KK+ + + ++ ++T QY S E +
Sbjct: 151 NSREKSEVSTDLVQANPKQGALAKKSSQTKKKKKAFNSQKTRQNKTVQYPSDILENTSV- 209
Query: 981 XXXXXXXXEEQAQMDVEMDSTPVGYQYGQG-------ADVTSRSFPDD-------LPRMR 1118
+ +D STP+ Q Q V +FP + R R
Sbjct: 210 ----------ELFLDANKLSTPIIEQVVQRNNSELELTSVVENTFPAQDIVQTVTVKRKR 259
Query: 1119 FK----CPYCTHVVKRKADLK-------------------------------------RH 1175
K C H + A +K RH
Sbjct: 260 GKSQPNCALKEHSMSNIATVKNSYELESSGEELDQRYSKAKPMCNTCGKVFSEASSLRRH 319
Query: 1176 LRCHTGERPYPCQACGKRFSRLDHLSSHFRTIHQACKLICRKCKR 1310
+R H G +PY C CGK F++ + L +H RT C C +
Sbjct: 320 MRIHKGVKPYVCHLCGKAFTQCNQLKTHVRTHTGEKPYKCELCDK 364
Score = 51.2 bits (121), Expect = 1e-06
Identities = 25/69 (36%), Positives = 31/69 (44%)
Frame = +3
Query: 1119 FKCPYCTHVVKRKADLKRHLRCHTGERPYPCQACGKRFSRLDHLSSHFRTIHQACKLICR 1298
+ C C + L H R HTGE+PY C CGK F L+ HFR+ IC
Sbjct: 442 YVCDTCGKAFAVSSSLITHSRKHTGEKPYICGICGKSFISSGELNKHFRSHTGERPFICE 501
Query: 1299 KCKRHVTDL 1325
C TD+
Sbjct: 502 LCGNSYTDI 510
Score = 50.8 bits (120), Expect = 2e-06
Identities = 22/62 (35%), Positives = 32/62 (51%)
Frame = +3
Query: 1119 FKCPYCTHVVKRKADLKRHLRCHTGERPYPCQACGKRFSRLDHLSSHFRTIHQACKLICR 1298
+KC C ++LK H R H+GE+PY C CG+RF++ L+ H R +C
Sbjct: 386 YKCDVCNLQFATSSNLKIHARKHSGEKPYVCDRCGQRFAQASTLTYHVRRHTGEKPYVCD 445
Query: 1299 KC 1304
C
Sbjct: 446 TC 447
>ref|XP_003128899.1| PREDICTED: zinc finger and BTB domain-containing protein 49 [Sus
scrofa].
Length = 762
Score = 93.2 bits (230), Expect = 3e-19
Identities = 50/121 (41%), Positives = 75/121 (61%), Gaps = 2/121 (1%)
Frame = +3
Query: 282 ISSHQSHLLQQLNEQRRQDVFCDCNILVEGKVFKAHRNVLFASSGYFKMLLSQTSKETSQ 461
+++H HLLQQL+EQR Q + CDC ++V+G FKAH+NVL A S YF+ L + +S
Sbjct: 4 VAAHSCHLLQQLHEQRIQGLLCDCMLVVKGVCFKAHKNVLAAFSQYFRSLF----QNSSG 59
Query: 462 PTTATFQAFSPDTFTV--ILDFVYSGRLSLTGQNVIEVMSAASFLQMTDVISVCKTFIKS 635
P F + + ILDF+Y+ RL L NV ++ A LQ+ +V+++C TF+KS
Sbjct: 60 PKNDVFHLDIKNVSGIGQILDFMYTSRLDLNQDNVQVMLDTAQCLQVQNVLNLCHTFLKS 119
Query: 636 S 638
+
Sbjct: 120 A 120
Score = 54.7 bits (130), Expect = 1e-07
Identities = 26/71 (36%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +3
Query: 1095 PDDLPRMR-FKCPYCTHVVKRKADLKRHLRCHTGERPYPCQACGKRFSRLDHLSSHFRTI 1271
P P R + C C K ++L+ H R HTGE+P+ C CGK FS+ +L +H R
Sbjct: 387 PQTPPSQRQYACDLCGKPFKHPSNLELHRRSHTGEKPFECNICGKHFSQAGNLQTHLRRH 446
Query: 1272 HQACKLICRKC 1304
IC C
Sbjct: 447 SGEKPYICEIC 457
Score = 52.4 bits (124), Expect = 6e-07
Identities = 39/135 (28%), Positives = 60/135 (44%), Gaps = 11/135 (8%)
Frame = +3
Query: 1005 EEQAQMDVEMDSTPVGYQYGQGADVTSRSF--PDDLPRMR--------FKCPYCTHVVKR 1154
EE A + + + P QY D+ + F P +L R F+C C +
Sbjct: 378 EEPAAPEEQPQTPPSQRQYA--CDLCGKPFKHPSNLELHRRSHTGEKPFECNICGKHFSQ 435
Query: 1155 KADLKRHLRCHTGERPYPCQACGKRFSRLDHLSSHFRTIHQACK-LICRKCKRHVTDLTG 1331
+L+ HLR H+GE+PY C+ CGKRF+ + H IH K +C C R ++ +
Sbjct: 436 AGNLQTHLRRHSGEKPYICEICGKRFAASGDVQRHI-IIHSGEKPHLCDICGRGFSNFSN 494
Query: 1332 QVVXEGTGATDSVMS 1376
+ T D V +
Sbjct: 495 LKEHKKTHTADKVFT 509
>ref|XP_003357696.1| PREDICTED: zinc finger protein 238-like [Sus scrofa].
Length = 531
Score = 92.0 bits (227), Expect = 7e-19
Identities = 58/175 (33%), Positives = 90/175 (51%), Gaps = 5/175 (2%)
Frame = +3
Query: 276 MEISSHQSHLLQQLNEQRRQDVFCDCNILVEGKVFKAHRNVLFASSGYFKMLLSQTSKET 455
ME H HLLQ L+EQR Q CDC +LV F+AHR VL + S YF L + +
Sbjct: 10 MEFPDHSRHLLQCLSEQRHQGFLCDCTVLVGDAQFRAHRAVLASCSMYFH-LFYKDQLDK 68
Query: 456 SQPTTATFQAFSPDTFTVILDFVYSGRLSLTGQNVIEVMSAASFLQMTDVISVCKTFIK- 632
+ F ++L+F+Y G+L + +V++AAS+L M D++ VCK +K
Sbjct: 69 RDIVHLNSDIVTAPAFALLLEFMYEGKLQFKDLPIEDVLAAASYLHMYDIVKVCKKKLKE 128
Query: 633 ---SSLDISEKEKDRYFSLSDK-DASSNGIERSSFYSGGWQDESSSPRSHLSPDQ 785
+ D ++KE+D S SDK ++ S+G + +DE + H+ P +
Sbjct: 129 KATTEADSTKKEEDA-SSCSDKVESLSDGSSHMAGDLPSDEDEGEDEKLHILPSK 182
Score = 48.9 bits (115), Expect = 7e-06
Identities = 24/65 (36%), Positives = 30/65 (46%)
Frame = +3
Query: 1125 CPYCTHVVKRKADLKRHLRCHTGERPYPCQACGKRFSRLDHLSSHFRTIHQACKLICRKC 1304
C C LKRH R H+GE+PY C CGK F +LS H + C+ C
Sbjct: 421 CSLCGKTFSCMYTLKRHERTHSGEKPYTCTQCGKSFQYSHNLSRHAVVHTREKPHACKWC 480
Query: 1305 KRHVT 1319
+R T
Sbjct: 481 ERRFT 485
>ref|XP_003353866.1| PREDICTED: zinc finger and BTB domain-containing protein 3 [Sus
scrofa].
Length = 539
Score = 88.6 bits (218), Expect = 8e-18
Identities = 57/192 (29%), Positives = 94/192 (48%), Gaps = 15/192 (7%)
Frame = +3
Query: 276 MEISSHQSHLLQQLNEQRRQDVFCDCNILVEGKVFKAHRNVLFASSGYFKMLLSQTSKET 455
ME H LLQ L EQR Q CDC ++V F AHR VL + S +F++ + +
Sbjct: 28 MEFPEHSQQLLQSLREQRSQGFLCDCTVMVGSTQFLAHRAVLASCSPFFQLFYKERELDK 87
Query: 456 SQPTTATFQAFSPDTFTVILDFVYSGRLSLTGQNVIE-VMSAASFLQMTDVISVCKTFIK 632
+ + F ++LDF+Y+G+L L G +E V++AAS+L M D++ VCK ++
Sbjct: 88 RDLVCIHNEIVTAPAFGLLLDFMYAGQLVLRGDTPVEDVLAAASYLHMNDIVKVCKRRLQ 147
Query: 633 ----SSLDISEKEKDRYFSLSDKDASSN----------GIERSSFYSGGWQDESSSPRSH 770
+ D ++KE++ S+ + S+ E S +S G S++P
Sbjct: 148 ARALAEADSTKKEEETNSQPSNLEFLSSTSRGPQPSLASAETSGHWSKGEWKGSTAPSPT 207
Query: 771 LSPDQGTGIISG 806
L P + + +G
Sbjct: 208 LCPPDESPMPAG 219
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 32,774,604
Number of extensions: 874272
Number of successful extensions: 6744
Number of sequences better than 1.0e-05: 436
Number of HSP's gapped: 6249
Number of HSP's successfully gapped: 1480
Length of query: 480
Length of database: 11,343,932
Length adjustment: 103
Effective length of query: 377
Effective length of database: 8,779,541
Effective search space: 3309886957
Effective search space used: 3309886957
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-004239
(1442 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr06 1629 0.0
>Sscrofa_Chr06
|| Length = 157765593
Score = 1629 bits (822), Expect = 0.0
Identities = 825/826 (99%)
Strand = Plus / Plus
Query: 273 agaatggagatctcctctcatcagtctcacctcctccaacaactgaatgagcagcgcagg 332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82991956 agaatggagatctcctctcatcagtctcacctcctccaacaactgaatgagcagcgcagg 82992015
Query: 333 caagatgtattttgtgattgcaatattctggttgaaggaaaagtcttcaaagcccatcgg 392
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82992016 caagatgtattttgtgattgcaatattctggttgaaggaaaagtcttcaaagcccatcgg 82992075
Query: 393 aatgtattatttgctagtagcggctactttaaaatgcttctttcgcagacttccaaggaa 452
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82992076 aatgtattatttgctagtagcggctactttaaaatgcttctttcgcagacttccaaggaa 82992135
Query: 453 acaagtcagccaaccaccgcgacgtttcaggctttctctcccgacacttttaccgtcatc 512
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82992136 acaagtcagccgaccaccgcgacgtttcaggctttctctcccgacacttttaccgtcatc 82992195
Query: 513 ctggacttcgtctactctggtaggctctctctcacgggtcagaatgtcatagaagtgatg 572
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82992196 ctggacttcgtctactctggtaggctctctctcacgggtcagaatgtcatagaagtgatg 82992255
Query: 573 tcagctgctagcttccttcagatgactgatgtcatcagcgtttgtaagacctttattaaa 632
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82992256 tcagctgctagcttccttcagatgactgatgtcatcagcgtttgtaagacctttattaaa 82992315
Query: 633 tcttcgctcgacatcagcgaaaaagaaaaagatcgctatttcagcctctccgataaagat 692
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82992316 tcttcgctcgacatcagcgaaaaagaaaaagatcgctatttcagcctctccgataaagat 82992375
Query: 693 gccagttctaatggtatagaacgttcctctttttatagcggtggttggcaagatgaaagc 752
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82992376 gccagttctaatggtatagaacgttcctctttttatagcggtggttggcaagatgaaagc 82992435
Query: 753 agttctccacgctctcacctgagccccgatcaagggacgggtataataagtgggaaatct 812
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82992436 agttctccacgctctcacctgagccccgatcaagggacgggtataataagtgggaaatct 82992495
Query: 813 tggagtaagtataattaccatccagccccccaaaggaatactcagcagcctctggccaag 872
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82992496 tggagtaagtataattaccatccagccccccaaaggaatactcagcagcctctggccaag 82992555
Query: 873 catgaacaaaggaaagagtccatgaaaaagtccaaacatttgaggttgtcacagccttct 932
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82992556 catgaacaaaggaaagagtccatgaaaaagtccaaacatttgaggttgtcacagccttct 82992615
Query: 933 gaaacaactcagtataagtcaagcaaacgagaagctcgaacatctgattcttccagccac 992
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82992616 gaaacaactcagtataagtcaagcaaacgagaagctcgaacatctgattcttccagccac 82992675
Query: 993 atttcccagtctgaagaacaggcacagatggatgtggaaatggactctactcctgttggc 1052
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82992676 atttcccagtctgaagaacaggcacagatggatgtggaaatggactctactcctgttggc 82992735
Query: 1053 tatcagtacggtcaaggagctgatgtcacatcaagaagttttccag 1098
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82992736 tatcagtacggtcaaggagctgatgtcacatcaagaagttttccag 82992781
Score = 343 bits (173), Expect = 2e-91
Identities = 173/173 (100%)
Strand = Plus / Plus
Query: 1096 cagatgacctgcccaggatgaggttcaagtgcccgtattgcacacatgtggtgaagcgga 1155
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82995691 cagatgacctgcccaggatgaggttcaagtgcccgtattgcacacatgtggtgaagcgga 82995750
Query: 1156 aggcagacctcaagcggcaccttcgttgtcacacaggagaaaggccttacccctgtcaag 1215
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82995751 aggcagacctcaagcggcaccttcgttgtcacacaggagaaaggccttacccctgtcaag 82995810
Query: 1216 cttgtgggaaaagatttagccggctagaccatctaagtagccattttcgaaca 1268
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82995811 cttgtgggaaaagatttagccggctagaccatctaagtagccattttcgaaca 82995863
Score = 325 bits (164), Expect = 4e-86
Identities = 173/175 (98%), Gaps = 1/175 (0%)
Strand = Plus / Plus
Query: 1269 attcaccaggcatgcaaactcatctgcagaaaatgcaaacgccatgtgactgatctaaca 1328
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82999277 attcaccaggcatgcaaactcatctgcagaaaatgcaaacgccatgtgactgatctaaca 82999336
Query: 1329 ggtcaagtggtgcangaaggaac-aggcgctacagactctgtaatgagtgccttgctgaa 1387
|||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 82999337 ggtcaagtggtgcaggaaggaaccaggcgctacagactctgtaatgagtgccttgctgaa 82999396
Query: 1388 gttggcatagacagcctccccattgatttggaagctgaacagcatcttatgtccc 1442
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82999397 gttggcatagacagcctccccattgatttggaagctgaacagcatcttatgtccc 82999451
Score = 256 bits (129), Expect = 3e-65
Identities = 129/129 (100%)
Strand = Plus / Plus
Query: 4 tttctgtccaacgcccacgtcagcaaataccttttgtttctctcacgttggggctacttg 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82962567 tttctgtccaacgcccacgtcagcaaataccttttgtttctctcacgttggggctacttg 82962626
Query: 64 ttttagggcgcaaaggaacggcttcaaaagggggtatttcccctgccgggaaccgggaat 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82962627 ttttagggcgcaaaggaacggcttcaaaagggggtatttcccctgccgggaaccgggaat 82962686
Query: 124 cttccccca 132
|||||||||
Sbjct: 82962687 cttccccca 82962695
Score = 204 bits (103), Expect = 1e-49
Identities = 103/103 (100%)
Strand = Plus / Plus
Query: 172 aaaagccttcatatacagactgtgtttaacttggaatcttcccctttttactccattcaa 231
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82980244 aaaagccttcatatacagactgtgtttaacttggaatcttcccctttttactccattcaa 82980303
Query: 232 tcgacttagcagggtttcaagagcagcatttataaattcccag 274
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82980304 tcgacttagcagggtttcaagagcagcatttataaattcccag 82980346
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 42,013,627
Number of extensions: 231
Number of successful extensions: 231
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 230
Number of HSP's successfully gapped: 5
Length of query: 1442
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1421
Effective length of database: 2,808,413,156
Effective search space: 3990755094676
Effective search space used: 3990755094676
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)