Animal-Genome cDNA 20110601C-006965

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-006965
         (1588 letters)

Database: RefSeq49_BP.fasta 
           33,088 sequences; 17,681,374 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001029835.1| tubulin beta-2C chain [Bos taurus].               835   0.0  
Alignment   gi|NP_001040014.1| tubulin beta-5 chain [Bos taurus].                826   0.0  
Alignment   gi|NP_001029869.1| tubulin beta-4 chain [Bos taurus].                825   0.0  
Alignment   gi|NP_001003900.1| tubulin beta-2B chain [Bos taurus].               822   0.0  
Alignment   gi|XP_002697652.1| PREDICTED: tubulin, beta 2-like [Bos taurus].     820   0.0  
Alignment   gi|XP_002703003.1| PREDICTED: tubulin, beta 2 [Bos taurus].          820   0.0  
Alignment   gi|NP_001070595.1| tubulin beta-3 chain [Bos taurus].                790   0.0  
Alignment   gi|NP_001039838.1| tubulin beta-6 chain [Bos taurus].                788   0.0  
Alignment   gi|XP_002698826.1| PREDICTED: tubulin, beta 5-like [Bos taurus].     783   0.0  
Alignment   gi|XP_612678.3| PREDICTED: tubulin, beta 5-like [Bos taurus].        783   0.0  

>ref|NP_001029835.1| tubulin beta-2C chain [Bos taurus].
          Length = 445

 Score =  835 bits (2156), Expect = 0.0
 Identities = 410/429 (95%), Positives = 410/429 (95%)
 Frame = +2

Query: 89   MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 268
            MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV
Sbjct: 1    MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60

Query: 269  PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 448
            PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 61   PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120

Query: 449  RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 628
            RKEAESCDCLQGFQ                   KIREEYPDRIMNTFSVVPSPKVSDTVV
Sbjct: 121  RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV 180

Query: 629  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 808
            EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
Sbjct: 181  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240

Query: 809  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 988
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 300

Query: 989  AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 1168
            AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
Sbjct: 301  AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 360

Query: 1169 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 1348
            LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361  LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 1349 EYQQYQDAT 1375
            EYQQYQDAT
Sbjct: 421  EYQQYQDAT 429


>ref|NP_001040014.1| tubulin beta-5 chain [Bos taurus].
          Length = 444

 Score =  826 bits (2134), Expect = 0.0
 Identities = 403/429 (93%), Positives = 409/429 (95%)
 Frame = +2

Query: 89   MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 268
            MREIVH+QAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL+RI+VYYNEATGGKYV
Sbjct: 1    MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYV 60

Query: 269  PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 448
            PRA+LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 61   PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120

Query: 449  RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 628
            RKEAESCDCLQGFQ                   KIREEYPDRIMNTFSVVPSPKVSDTVV
Sbjct: 121  RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV 180

Query: 629  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 808
            EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
Sbjct: 181  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240

Query: 809  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 988
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQ+FDAKNMM
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMM 300

Query: 989  AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 1168
            AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
Sbjct: 301  AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 360

Query: 1169 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 1348
            LKM+ TFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361  LKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 1349 EYQQYQDAT 1375
            EYQQYQDAT
Sbjct: 421  EYQQYQDAT 429


>ref|NP_001029869.1| tubulin beta-4 chain [Bos taurus].
          Length = 444

 Score =  825 bits (2131), Expect = 0.0
 Identities = 404/429 (94%), Positives = 409/429 (95%)
 Frame = +2

Query: 89   MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 268
            MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGG YV
Sbjct: 1    MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGNYV 60

Query: 269  PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 448
            PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDVV
Sbjct: 61   PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDAVLDVV 120

Query: 449  RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 628
            RKEAESCDCLQGFQ                   KIREE+PDRIMNTFSVVPSPKVSDTVV
Sbjct: 121  RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTFSVVPSPKVSDTVV 180

Query: 629  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 808
            EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
Sbjct: 181  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240

Query: 809  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 988
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 300

Query: 989  AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 1168
            AACDPRHGRYLTVAAVFRGRMSMKEVDEQML+VQ+KNSSYFVEWIPNNVKTAVCDIPPRG
Sbjct: 301  AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLSVQSKNSSYFVEWIPNNVKTAVCDIPPRG 360

Query: 1169 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 1348
            LKM+ATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361  LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 1349 EYQQYQDAT 1375
            EYQQYQDAT
Sbjct: 421  EYQQYQDAT 429


>ref|NP_001003900.1| tubulin beta-2B chain [Bos taurus].
          Length = 445

 Score =  822 bits (2123), Expect = 0.0
 Identities = 401/429 (93%), Positives = 408/429 (95%)
 Frame = +2

Query: 89   MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 268
            MREIVH+QAGQCGNQIGAKFWEVISDEHGIDPTG+YHGDSDLQLERINVYYNEATG KYV
Sbjct: 1    MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEATGNKYV 60

Query: 269  PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 448
            PRA+LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 61   PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120

Query: 449  RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 628
            RKE+ESCDCLQGFQ                   KIREEYPDRIMNTFSV+PSPKVSDTVV
Sbjct: 121  RKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVV 180

Query: 629  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 808
            EPYNATLSVHQLVENTDETY IDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
Sbjct: 181  EPYNATLSVHQLVENTDETYSIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240

Query: 809  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 988
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFD+KNMM
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMM 300

Query: 989  AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 1168
            AACDPRHGRYLTVAA+FRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
Sbjct: 301  AACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 360

Query: 1169 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 1348
            LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361  LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 1349 EYQQYQDAT 1375
            EYQQYQDAT
Sbjct: 421  EYQQYQDAT 429


>ref|XP_002697652.1| PREDICTED: tubulin, beta 2-like [Bos taurus].
          Length = 445

 Score =  820 bits (2118), Expect = 0.0
 Identities = 400/429 (93%), Positives = 407/429 (94%)
 Frame = +2

Query: 89   MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 268
            MREIVH+QAGQCGNQIGAKFWEVISDEHGIDPTG+YHGDSDLQLERINVYYNEA G KYV
Sbjct: 1    MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEAAGNKYV 60

Query: 269  PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 448
            PRA+LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 61   PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120

Query: 449  RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 628
            RKE+ESCDCLQGFQ                   KIREEYPDRIMNTFSV+PSPKVSDTVV
Sbjct: 121  RKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVV 180

Query: 629  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 808
            EPYNATLSVHQLVENTDETY IDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
Sbjct: 181  EPYNATLSVHQLVENTDETYSIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240

Query: 809  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 988
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFD+KNMM
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMM 300

Query: 989  AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 1168
            AACDPRHGRYLTVAA+FRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
Sbjct: 301  AACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 360

Query: 1169 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 1348
            LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361  LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 1349 EYQQYQDAT 1375
            EYQQYQDAT
Sbjct: 421  EYQQYQDAT 429


>ref|XP_002703003.1| PREDICTED: tubulin, beta 2 [Bos taurus].
          Length = 445

 Score =  820 bits (2118), Expect = 0.0
 Identities = 400/429 (93%), Positives = 407/429 (94%)
 Frame = +2

Query: 89   MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 268
            MREIVH+QAGQCGNQIGAKFWEVISDEHGIDPTG+YHGDSDLQLERINVYYNEA G KYV
Sbjct: 1    MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEAAGNKYV 60

Query: 269  PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 448
            PRA+LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 61   PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120

Query: 449  RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 628
            RKE+ESCDCLQGFQ                   KIREEYPDRIMNTFSV+PSPKVSDTVV
Sbjct: 121  RKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVV 180

Query: 629  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 808
            EPYNATLSVHQLVENTDETY IDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
Sbjct: 181  EPYNATLSVHQLVENTDETYSIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240

Query: 809  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 988
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFD+KNMM
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMM 300

Query: 989  AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 1168
            AACDPRHGRYLTVAA+FRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
Sbjct: 301  AACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 360

Query: 1169 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 1348
            LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361  LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 1349 EYQQYQDAT 1375
            EYQQYQDAT
Sbjct: 421  EYQQYQDAT 429


>ref|NP_001070595.1| tubulin beta-3 chain [Bos taurus].
          Length = 450

 Score =  790 bits (2041), Expect = 0.0
 Identities = 384/429 (89%), Positives = 398/429 (92%)
 Frame = +2

Query: 89   MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 268
            MREIVH+QAGQCGNQIGAKFWEVISDEHGIDP+G Y GDSDLQLERI+VYYNEA+  KYV
Sbjct: 1    MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPSGNYVGDSDLQLERISVYYNEASSHKYV 60

Query: 269  PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 448
            PRA+LVDLEPGTMDSVRSG FG +FRPDNF+FGQSGAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 61   PRAILVDLEPGTMDSVRSGAFGHLFRPDNFIFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120

Query: 449  RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 628
            RKE E+CDCLQGFQ                   K+REEYPDRIMNTFSVVPSPKVSDTVV
Sbjct: 121  RKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKVREEYPDRIMNTFSVVPSPKVSDTVV 180

Query: 629  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 808
            EPYNATLS+HQLVENTDETYCIDNEALYDICFRTLKL TPTYGDLNHLVSATMSGVTT L
Sbjct: 181  EPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKLATPTYGDLNHLVSATMSGVTTSL 240

Query: 809  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 988
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT+RGSQQYRALTVPELTQQMFDAKNMM
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMM 300

Query: 989  AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 1168
            AACDPRHGRYLTVA VFRGRMSMKEVDEQML +Q+KNSSYFVEWIPNNVK AVCDIPPRG
Sbjct: 301  AACDPRHGRYLTVATVFRGRMSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVCDIPPRG 360

Query: 1169 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 1348
            LKMS+TFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361  LKMSSTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 1349 EYQQYQDAT 1375
            EYQQYQDAT
Sbjct: 421  EYQQYQDAT 429


>ref|NP_001039838.1| tubulin beta-6 chain [Bos taurus].
          Length = 446

 Score =  788 bits (2034), Expect = 0.0
 Identities = 385/429 (89%), Positives = 396/429 (92%)
 Frame = +2

Query: 89   MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 268
            MREIVH+QAGQCGNQIG KFWEVISDEHGIDP G Y GDS LQLERINVYYNE++  KYV
Sbjct: 1    MREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGGYVGDSALQLERINVYYNESSSQKYV 60

Query: 269  PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 448
            PRA LVDLEPGTMDSVRSGPFGQ+FRPDNF+FGQ+GAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 61   PRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELVDSVLDVV 120

Query: 449  RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 628
            RKE E CDCLQGFQ                   KIREEYPDRIMNTFSV+PSPKVSDTVV
Sbjct: 121  RKECEHCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVV 180

Query: 629  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 808
            EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT L
Sbjct: 181  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSL 240

Query: 809  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 988
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT+RGSQQYRALTVPELTQQMFDAKNMM
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMM 300

Query: 989  AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 1168
            AACDPRHGRYLTVAAVFRG MSMKEVDEQML +QNKNSSYFVEWIPNNVK AVCDIPPRG
Sbjct: 301  AACDPRHGRYLTVAAVFRGPMSMKEVDEQMLAIQNKNSSYFVEWIPNNVKVAVCDIPPRG 360

Query: 1169 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 1348
            LKMSATFIGNSTAIQELFKRISEQF+AMFRRKAFLHW+TGEGMDEMEFTEAESNMNDLVS
Sbjct: 361  LKMSATFIGNSTAIQELFKRISEQFSAMFRRKAFLHWFTGEGMDEMEFTEAESNMNDLVS 420

Query: 1349 EYQQYQDAT 1375
            EYQQYQDAT
Sbjct: 421  EYQQYQDAT 429


>ref|XP_002698826.1| PREDICTED: tubulin, beta 5-like [Bos taurus].
          Length = 444

 Score =  783 bits (2023), Expect = 0.0
 Identities = 385/429 (89%), Positives = 394/429 (91%)
 Frame = +2

Query: 89   MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 268
            MREIVH+QAGQCGNQIGAKFWEVISDEHGID TGTYHGDSDLQL+RI+VYYNEATGGKYV
Sbjct: 1    MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGTYHGDSDLQLDRISVYYNEATGGKYV 60

Query: 269  PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 448
            PRA+LVDLEPGTMDSV SGPFGQIFR DN VFGQSGA NNWAKGHY EGAELVDSVLDVV
Sbjct: 61   PRAILVDLEPGTMDSVHSGPFGQIFRSDNIVFGQSGADNNWAKGHYREGAELVDSVLDVV 120

Query: 449  RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 628
            RKEA+SCDCLQGFQ                   KIREEYPD IMNTFSVVPSPKVSDTVV
Sbjct: 121  RKEAKSCDCLQGFQLTHSLGGGTDSGMGTLLISKIREEYPDHIMNTFSVVPSPKVSDTVV 180

Query: 629  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 808
            EPYNATLSVHQLVENTDETYCIDNEALY ICFRTLKLTTPTYGDLN LVSATMSGVTTCL
Sbjct: 181  EPYNATLSVHQLVENTDETYCIDNEALYAICFRTLKLTTPTYGDLNQLVSATMSGVTTCL 240

Query: 809  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 988
            RFPGQLNADL KLAVNMVPFP LHFF+PGFAPLTS GSQQY ALTVPELTQQ+FDAKNMM
Sbjct: 241  RFPGQLNADLHKLAVNMVPFPHLHFFVPGFAPLTSCGSQQYWALTVPELTQQVFDAKNMM 300

Query: 989  AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 1168
            AACDPRHGRYLTVAAVFRG+MSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
Sbjct: 301  AACDPRHGRYLTVAAVFRGQMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 360

Query: 1169 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 1348
            LKM+ TFIGNSTAIQELFKRISEQF AMFRRKAFLHWYTGEGMDE EFTEAESNMNDLVS
Sbjct: 361  LKMAVTFIGNSTAIQELFKRISEQFMAMFRRKAFLHWYTGEGMDETEFTEAESNMNDLVS 420

Query: 1349 EYQQYQDAT 1375
            EYQQYQDAT
Sbjct: 421  EYQQYQDAT 429


>ref|XP_612678.3| PREDICTED: tubulin, beta 5-like [Bos taurus].
          Length = 444

 Score =  783 bits (2023), Expect = 0.0
 Identities = 385/429 (89%), Positives = 394/429 (91%)
 Frame = +2

Query: 89   MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 268
            MREIVH+QAGQCGNQIGAKFWEVISDEHGID TGTYHGDSDLQL+RI+VYYNEATGGKYV
Sbjct: 1    MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGTYHGDSDLQLDRISVYYNEATGGKYV 60

Query: 269  PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 448
            PRA+LVDLEPGTMDSV SGPFGQIFR DN VFGQSGA NNWAKGHY EGAELVDSVLDVV
Sbjct: 61   PRAILVDLEPGTMDSVHSGPFGQIFRSDNIVFGQSGADNNWAKGHYREGAELVDSVLDVV 120

Query: 449  RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 628
            RKEA+SCDCLQGFQ                   KIREEYPD IMNTFSVVPSPKVSDTVV
Sbjct: 121  RKEAKSCDCLQGFQLTHSLGGGTDSGMGTLLISKIREEYPDHIMNTFSVVPSPKVSDTVV 180

Query: 629  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 808
            EPYNATLSVHQLVENTDETYCIDNEALY ICFRTLKLTTPTYGDLN LVSATMSGVTTCL
Sbjct: 181  EPYNATLSVHQLVENTDETYCIDNEALYAICFRTLKLTTPTYGDLNQLVSATMSGVTTCL 240

Query: 809  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 988
            RFPGQLNADL KLAVNMVPFP LHFF+PGFAPLTS GSQQY ALTVPELTQQ+FDAKNMM
Sbjct: 241  RFPGQLNADLHKLAVNMVPFPHLHFFVPGFAPLTSCGSQQYWALTVPELTQQVFDAKNMM 300

Query: 989  AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 1168
            AACDPRHGRYLTVAAVFRG+MSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
Sbjct: 301  AACDPRHGRYLTVAAVFRGQMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 360

Query: 1169 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 1348
            LKM+ TFIGNSTAIQELFKRISEQF AMFRRKAFLHWYTGEGMDE EFTEAESNMNDLVS
Sbjct: 361  LKMAVTFIGNSTAIQELFKRISEQFMAMFRRKAFLHWYTGEGMDETEFTEAESNMNDLVS 420

Query: 1349 EYQQYQDAT 1375
            EYQQYQDAT
Sbjct: 421  EYQQYQDAT 429


  Database: RefSeq49_BP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 17,681,374
  Number of sequences in database:  33,088
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 45,484,850
Number of extensions: 1126573
Number of successful extensions: 5098
Number of sequences better than 1.0e-05: 33
Number of HSP's gapped: 5007
Number of HSP's successfully gapped: 33
Length of query: 529
Length of database: 17,681,374
Length adjustment: 107
Effective length of query: 422
Effective length of database: 14,140,958
Effective search space: 5967484276
Effective search space used: 5967484276
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-006965
         (1588 letters)

Database: RefSeq49_CP.fasta 
           33,336 sequences; 18,874,504 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_848461.1| PREDICTED: similar to tubulin, beta, 2 isoform ...   835   0.0  
Alignment   gi|XP_533934.2| PREDICTED: similar to tubulin, beta 4 [Canis fa...   827   0.0  
Alignment   gi|XP_532060.2| PREDICTED: similar to tubulin, beta 5 [Canis fa...   826   0.0  
Alignment   gi|XP_856242.1| PREDICTED: similar to tubulin, beta isoform 4 [...   826   0.0  
Alignment   gi|XP_848443.1| PREDICTED: similar to tubulin, beta isoform 1 [...   826   0.0  
Alignment   gi|XP_856209.1| PREDICTED: similar to tubulin, beta, 2 isoform ...   820   0.0  
Alignment   gi|XP_536745.1| PREDICTED: similar to tubulin, beta 3 isoform 1...   790   0.0  
Alignment   gi|XP_850030.1| PREDICTED: similar to tubulin, beta 6 isoform 2...   787   0.0  
Alignment   gi|XP_859971.1| PREDICTED: similar to tubulin, beta 3 isoform 2...   787   0.0  
Alignment   gi|XP_856151.1| PREDICTED: similar to tubulin, beta isoform 2 [...   786   0.0  

>ref|XP_848461.1| PREDICTED: similar to tubulin, beta, 2 isoform 1 [Canis familiaris].
          Length = 445

 Score =  835 bits (2156), Expect = 0.0
 Identities = 410/429 (95%), Positives = 410/429 (95%)
 Frame = +2

Query: 89   MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 268
            MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV
Sbjct: 1    MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60

Query: 269  PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 448
            PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 61   PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120

Query: 449  RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 628
            RKEAESCDCLQGFQ                   KIREEYPDRIMNTFSVVPSPKVSDTVV
Sbjct: 121  RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV 180

Query: 629  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 808
            EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
Sbjct: 181  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240

Query: 809  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 988
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 300

Query: 989  AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 1168
            AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
Sbjct: 301  AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 360

Query: 1169 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 1348
            LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361  LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 1349 EYQQYQDAT 1375
            EYQQYQDAT
Sbjct: 421  EYQQYQDAT 429


>ref|XP_533934.2| PREDICTED: similar to tubulin, beta 4 [Canis familiaris].
          Length = 576

 Score =  827 bits (2135), Expect = 0.0
 Identities = 405/430 (94%), Positives = 410/430 (95%)
 Frame = +2

Query: 86   AMREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKY 265
            AMREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGG Y
Sbjct: 132  AMREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGNY 191

Query: 266  VPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 445
            VPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDV
Sbjct: 192  VPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDAVLDV 251

Query: 446  VRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTV 625
            VRKEAESCDCLQGFQ                   KIREE+PDRIMNTFSVVPSPKVSDTV
Sbjct: 252  VRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTFSVVPSPKVSDTV 311

Query: 626  VEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTC 805
            VEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTC
Sbjct: 312  VEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTC 371

Query: 806  LRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNM 985
            LRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNM
Sbjct: 372  LRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNM 431

Query: 986  MAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPR 1165
            MAACDPRHGRYLTVAAVFRGRMSMKEVDEQML+VQ+KNSSYFVEWIPNNVKTAVCDIPPR
Sbjct: 432  MAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLSVQSKNSSYFVEWIPNNVKTAVCDIPPR 491

Query: 1166 GLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 1345
            GLKM+ATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV
Sbjct: 492  GLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 551

Query: 1346 SEYQQYQDAT 1375
            SEYQQYQDAT
Sbjct: 552  SEYQQYQDAT 561


>ref|XP_532060.2| PREDICTED: similar to tubulin, beta 5 [Canis familiaris].
          Length = 444

 Score =  826 bits (2134), Expect = 0.0
 Identities = 403/429 (93%), Positives = 409/429 (95%)
 Frame = +2

Query: 89   MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 268
            MREIVH+QAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL+RI+VYYNEATGGKYV
Sbjct: 1    MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYV 60

Query: 269  PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 448
            PRA+LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 61   PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120

Query: 449  RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 628
            RKEAESCDCLQGFQ                   KIREEYPDRIMNTFSVVPSPKVSDTVV
Sbjct: 121  RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV 180

Query: 629  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 808
            EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
Sbjct: 181  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240

Query: 809  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 988
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQ+FDAKNMM
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMM 300

Query: 989  AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 1168
            AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
Sbjct: 301  AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 360

Query: 1169 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 1348
            LKM+ TFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361  LKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 1349 EYQQYQDAT 1375
            EYQQYQDAT
Sbjct: 421  EYQQYQDAT 429


>ref|XP_856242.1| PREDICTED: similar to tubulin, beta isoform 4 [Canis familiaris].
          Length = 445

 Score =  826 bits (2133), Expect = 0.0
 Identities = 402/429 (93%), Positives = 409/429 (95%)
 Frame = +2

Query: 89   MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 268
            MREIVH+QAGQCGNQIGAKFWEVISDEHGIDPTG+YHGDSDLQLERINVYYNEATG KYV
Sbjct: 1    MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEATGNKYV 60

Query: 269  PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 448
            PRA+LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 61   PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120

Query: 449  RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 628
            RKE+ESCDCLQGFQ                   KIREEYPDRIMNTFSV+PSPKVSDTVV
Sbjct: 121  RKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVV 180

Query: 629  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 808
            EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
Sbjct: 181  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240

Query: 809  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 988
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFD+KNMM
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMM 300

Query: 989  AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 1168
            AACDPRHGRYLTVAA+FRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
Sbjct: 301  AACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 360

Query: 1169 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 1348
            LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361  LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 1349 EYQQYQDAT 1375
            EYQQYQDAT
Sbjct: 421  EYQQYQDAT 429


>ref|XP_848443.1| PREDICTED: similar to tubulin, beta isoform 1 [Canis familiaris].
          Length = 445

 Score =  826 bits (2133), Expect = 0.0
 Identities = 402/429 (93%), Positives = 409/429 (95%)
 Frame = +2

Query: 89   MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 268
            MREIVH+QAGQCGNQIGAKFWEVISDEHGIDPTG+YHGDSDLQLERINVYYNEATG KYV
Sbjct: 1    MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEATGNKYV 60

Query: 269  PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 448
            PRA+LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 61   PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120

Query: 449  RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 628
            RKE+ESCDCLQGFQ                   KIREEYPDRIMNTFSV+PSPKVSDTVV
Sbjct: 121  RKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVV 180

Query: 629  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 808
            EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
Sbjct: 181  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240

Query: 809  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 988
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFD+KNMM
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMM 300

Query: 989  AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 1168
            AACDPRHGRYLTVAA+FRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
Sbjct: 301  AACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 360

Query: 1169 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 1348
            LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361  LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 1349 EYQQYQDAT 1375
            EYQQYQDAT
Sbjct: 421  EYQQYQDAT 429


>ref|XP_856209.1| PREDICTED: similar to tubulin, beta, 2 isoform 2 [Canis familiaris].
          Length = 472

 Score =  820 bits (2118), Expect = 0.0
 Identities = 410/456 (89%), Positives = 410/456 (89%), Gaps = 27/456 (5%)
 Frame = +2

Query: 89   MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATG---- 256
            MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATG    
Sbjct: 1    MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGETPR 60

Query: 257  -----------------------GKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFG 367
                                   GKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFG
Sbjct: 61   PFLNYFCVPSALRSLTSPSLPLGGKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFG 120

Query: 368  QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXX 547
            QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQ                   
Sbjct: 121  QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLIS 180

Query: 548  KIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 727
            KIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR
Sbjct: 181  KIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 240

Query: 728  TLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPL 907
            TLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPL
Sbjct: 241  TLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPL 300

Query: 908  TSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNV 1087
            TSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNV
Sbjct: 301  TSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNV 360

Query: 1088 QNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKA 1267
            QNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKA
Sbjct: 361  QNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKA 420

Query: 1268 FLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDAT 1375
            FLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDAT
Sbjct: 421  FLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDAT 456


>ref|XP_536745.1| PREDICTED: similar to tubulin, beta 3 isoform 1 [Canis familiaris].
          Length = 450

 Score =  790 bits (2041), Expect = 0.0
 Identities = 384/429 (89%), Positives = 398/429 (92%)
 Frame = +2

Query: 89   MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 268
            MREIVH+QAGQCGNQIGAKFWEVISDEHGIDP+G Y GDSDLQLERI+VYYNEA+  KYV
Sbjct: 1    MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPSGNYVGDSDLQLERISVYYNEASSHKYV 60

Query: 269  PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 448
            PRA+LVDLEPGTMDSVRSG FG +FRPDNF+FGQSGAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 61   PRAILVDLEPGTMDSVRSGAFGHLFRPDNFIFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120

Query: 449  RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 628
            RKE E+CDCLQGFQ                   K+REEYPDRIMNTFSVVPSPKVSDTVV
Sbjct: 121  RKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKVREEYPDRIMNTFSVVPSPKVSDTVV 180

Query: 629  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 808
            EPYNATLS+HQLVENTDETYCIDNEALYDICFRTLKL TPTYGDLNHLVSATMSGVTT L
Sbjct: 181  EPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKLATPTYGDLNHLVSATMSGVTTSL 240

Query: 809  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 988
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT+RGSQQYRALTVPELTQQMFDAKNMM
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMM 300

Query: 989  AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 1168
            AACDPRHGRYLTVA VFRGRMSMKEVDEQML +Q+KNSSYFVEWIPNNVK AVCDIPPRG
Sbjct: 301  AACDPRHGRYLTVATVFRGRMSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVCDIPPRG 360

Query: 1169 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 1348
            LKMS+TFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361  LKMSSTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 1349 EYQQYQDAT 1375
            EYQQYQDAT
Sbjct: 421  EYQQYQDAT 429


>ref|XP_850030.1| PREDICTED: similar to tubulin, beta 6 isoform 2 [Canis familiaris].
          Length = 446

 Score =  787 bits (2033), Expect = 0.0
 Identities = 384/429 (89%), Positives = 397/429 (92%)
 Frame = +2

Query: 89   MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 268
            MREIVH+QAGQCGNQIG KFWEVISDEHGIDP G Y GDS LQLERINVYYNE++ GKYV
Sbjct: 1    MREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGGYVGDSALQLERINVYYNESSCGKYV 60

Query: 269  PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 448
            PRA LVDLEPGTMDSVRSGPFGQ+FRPDNF+FGQ+GAGNNWAKGHYTEGAELVD+VLDVV
Sbjct: 61   PRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELVDAVLDVV 120

Query: 449  RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 628
            RKE E CDCLQGFQ                   KIREEYPDRIMNTFSV+PSPKVSDTVV
Sbjct: 121  RKECEHCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVV 180

Query: 629  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 808
            EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT L
Sbjct: 181  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSL 240

Query: 809  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 988
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT+RGSQQYRALTVPELTQQMFDAKNMM
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMM 300

Query: 989  AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 1168
            AACDPRHGRYLTVAAVFRG MSMKEVDEQML +QNKNSSYFVEWIPNNVK AVCDIPPRG
Sbjct: 301  AACDPRHGRYLTVAAVFRGPMSMKEVDEQMLAIQNKNSSYFVEWIPNNVKVAVCDIPPRG 360

Query: 1169 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 1348
            LKM+ATFIGNSTAIQELFKRISEQF+AMFRRKAFLHW+TGEGMDEMEFTEAESNMNDLVS
Sbjct: 361  LKMAATFIGNSTAIQELFKRISEQFSAMFRRKAFLHWFTGEGMDEMEFTEAESNMNDLVS 420

Query: 1349 EYQQYQDAT 1375
            EYQQYQDAT
Sbjct: 421  EYQQYQDAT 429


>ref|XP_859971.1| PREDICTED: similar to tubulin, beta 3 isoform 2 [Canis familiaris].
          Length = 453

 Score =  787 bits (2032), Expect = 0.0
 Identities = 384/432 (88%), Positives = 399/432 (92%), Gaps = 3/432 (0%)
 Frame = +2

Query: 89   MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEAT---GG 259
            MREIVH+QAGQCGNQIGAKFWEVISDEHGIDP+G Y GDSDLQLERI+VYYNEA+   G 
Sbjct: 1    MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPSGNYVGDSDLQLERISVYYNEASSRGGS 60

Query: 260  KYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL 439
            +YVPRA+LVDLEPGTMDSVRSG FG +FRPDNF+FGQSGAGNNWAKGHYTEGAELVDSVL
Sbjct: 61   RYVPRAILVDLEPGTMDSVRSGAFGHLFRPDNFIFGQSGAGNNWAKGHYTEGAELVDSVL 120

Query: 440  DVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSD 619
            DVVRKE E+CDCLQGFQ                   K+REEYPDRIMNTFSVVPSPKVSD
Sbjct: 121  DVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKVREEYPDRIMNTFSVVPSPKVSD 180

Query: 620  TVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVT 799
            TVVEPYNATLS+HQLVENTDETYCIDNEALYDICFRTLKL TPTYGDLNHLVSATMSGVT
Sbjct: 181  TVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKLATPTYGDLNHLVSATMSGVT 240

Query: 800  TCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAK 979
            T LRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT+RGSQQYRALTVPELTQQMFDAK
Sbjct: 241  TSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAK 300

Query: 980  NMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIP 1159
            NMMAACDPRHGRYLTVA VFRGRMSMKEVDEQML +Q+KNSSYFVEWIPNNVK AVCDIP
Sbjct: 301  NMMAACDPRHGRYLTVATVFRGRMSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVCDIP 360

Query: 1160 PRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND 1339
            PRGLKMS+TFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND
Sbjct: 361  PRGLKMSSTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND 420

Query: 1340 LVSEYQQYQDAT 1375
            LVSEYQQYQDAT
Sbjct: 421  LVSEYQQYQDAT 432


>ref|XP_856151.1| PREDICTED: similar to tubulin, beta isoform 2 [Canis familiaris].
          Length = 431

 Score =  786 bits (2031), Expect = 0.0
 Identities = 388/429 (90%), Positives = 395/429 (92%)
 Frame = +2

Query: 89   MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 268
            MREIVH+QAGQCGNQIGAKFWEVISDEHGIDPTG+YHGDSDLQLERINVYYNEATG KYV
Sbjct: 1    MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEATGNKYV 60

Query: 269  PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 448
            PRA+LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 61   PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120

Query: 449  RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 628
            RKE+ESCDCLQGFQ                   KIREEYPDRIMNTFSV+PSPKVSDTVV
Sbjct: 121  RKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVV 180

Query: 629  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 808
            EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
Sbjct: 181  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240

Query: 809  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 988
            RFPGQLNADLRKLAVNMVPFPR              GSQQYRALTVPELTQQMFD+KNMM
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPR--------------GSQQYRALTVPELTQQMFDSKNMM 286

Query: 989  AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 1168
            AACDPRHGRYLTVAA+FRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
Sbjct: 287  AACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 346

Query: 1169 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 1348
            LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 347  LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 406

Query: 1349 EYQQYQDAT 1375
            EYQQYQDAT
Sbjct: 407  EYQQYQDAT 415


  Database: RefSeq49_CP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,874,504
  Number of sequences in database:  33,336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 47,352,513
Number of extensions: 1126506
Number of successful extensions: 5559
Number of sequences better than 1.0e-05: 108
Number of HSP's gapped: 5372
Number of HSP's successfully gapped: 120
Length of query: 529
Length of database: 18,874,504
Length adjustment: 107
Effective length of query: 422
Effective length of database: 15,307,552
Effective search space: 6459786944
Effective search space used: 6459786944
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-006965
         (1588 letters)

Database: RefSeq49_HP.fasta 
           32,964 sequences; 18,297,164 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_006079.1| tubulin beta-2C chain [Homo sapiens].                835   0.0  
Alignment   gi|NP_821133.1| tubulin beta chain [Homo sapiens].                   826   0.0  
Alignment   gi|NP_821080.1| tubulin beta-2B chain [Homo sapiens].                826   0.0  
Alignment   gi|NP_006078.2| tubulin beta-4 chain [Homo sapiens].                 825   0.0  
Alignment   gi|NP_001060.1| tubulin beta-2A chain [Homo sapiens].                820   0.0  
Alignment   gi|NP_006077.2| tubulin beta-3 chain isoform 1 [Homo sapiens].       790   0.0  
Alignment   gi|NP_115914.1| tubulin beta-6 chain [Homo sapiens].                 779   0.0  
Alignment   gi|NP_817124.1| tubulin beta-8 chain isoform 1 [Homo sapiens].       777   0.0  
Alignment   gi|NP_110400.1| tubulin beta-1 chain [Homo sapiens].                 684   0.0  
Alignment   gi|NP_001184110.1| tubulin beta-3 chain isoform 2 [Homo sapiens].    658   0.0  

>ref|NP_006079.1| tubulin beta-2C chain [Homo sapiens].
          Length = 445

 Score =  835 bits (2156), Expect = 0.0
 Identities = 410/429 (95%), Positives = 410/429 (95%)
 Frame = +2

Query: 89   MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 268
            MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV
Sbjct: 1    MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60

Query: 269  PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 448
            PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 61   PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120

Query: 449  RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 628
            RKEAESCDCLQGFQ                   KIREEYPDRIMNTFSVVPSPKVSDTVV
Sbjct: 121  RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV 180

Query: 629  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 808
            EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
Sbjct: 181  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240

Query: 809  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 988
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 300

Query: 989  AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 1168
            AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
Sbjct: 301  AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 360

Query: 1169 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 1348
            LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361  LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 1349 EYQQYQDAT 1375
            EYQQYQDAT
Sbjct: 421  EYQQYQDAT 429


>ref|NP_821133.1| tubulin beta chain [Homo sapiens].
          Length = 444

 Score =  826 bits (2134), Expect = 0.0
 Identities = 403/429 (93%), Positives = 409/429 (95%)
 Frame = +2

Query: 89   MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 268
            MREIVH+QAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL+RI+VYYNEATGGKYV
Sbjct: 1    MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYV 60

Query: 269  PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 448
            PRA+LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 61   PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120

Query: 449  RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 628
            RKEAESCDCLQGFQ                   KIREEYPDRIMNTFSVVPSPKVSDTVV
Sbjct: 121  RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV 180

Query: 629  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 808
            EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
Sbjct: 181  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240

Query: 809  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 988
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQ+FDAKNMM
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMM 300

Query: 989  AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 1168
            AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
Sbjct: 301  AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 360

Query: 1169 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 1348
            LKM+ TFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361  LKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 1349 EYQQYQDAT 1375
            EYQQYQDAT
Sbjct: 421  EYQQYQDAT 429


>ref|NP_821080.1| tubulin beta-2B chain [Homo sapiens].
          Length = 445

 Score =  826 bits (2133), Expect = 0.0
 Identities = 402/429 (93%), Positives = 409/429 (95%)
 Frame = +2

Query: 89   MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 268
            MREIVH+QAGQCGNQIGAKFWEVISDEHGIDPTG+YHGDSDLQLERINVYYNEATG KYV
Sbjct: 1    MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEATGNKYV 60

Query: 269  PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 448
            PRA+LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 61   PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120

Query: 449  RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 628
            RKE+ESCDCLQGFQ                   KIREEYPDRIMNTFSV+PSPKVSDTVV
Sbjct: 121  RKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVV 180

Query: 629  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 808
            EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
Sbjct: 181  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240

Query: 809  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 988
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFD+KNMM
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMM 300

Query: 989  AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 1168
            AACDPRHGRYLTVAA+FRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
Sbjct: 301  AACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 360

Query: 1169 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 1348
            LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361  LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 1349 EYQQYQDAT 1375
            EYQQYQDAT
Sbjct: 421  EYQQYQDAT 429


>ref|NP_006078.2| tubulin beta-4 chain [Homo sapiens].
          Length = 444

 Score =  825 bits (2131), Expect = 0.0
 Identities = 404/429 (94%), Positives = 409/429 (95%)
 Frame = +2

Query: 89   MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 268
            MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGG YV
Sbjct: 1    MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGNYV 60

Query: 269  PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 448
            PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDVV
Sbjct: 61   PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDAVLDVV 120

Query: 449  RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 628
            RKEAESCDCLQGFQ                   KIREE+PDRIMNTFSVVPSPKVSDTVV
Sbjct: 121  RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTFSVVPSPKVSDTVV 180

Query: 629  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 808
            EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
Sbjct: 181  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240

Query: 809  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 988
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 300

Query: 989  AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 1168
            AACDPRHGRYLTVAAVFRGRMSMKEVDEQML+VQ+KNSSYFVEWIPNNVKTAVCDIPPRG
Sbjct: 301  AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLSVQSKNSSYFVEWIPNNVKTAVCDIPPRG 360

Query: 1169 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 1348
            LKM+ATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361  LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 1349 EYQQYQDAT 1375
            EYQQYQDAT
Sbjct: 421  EYQQYQDAT 429


>ref|NP_001060.1| tubulin beta-2A chain [Homo sapiens].
          Length = 445

 Score =  820 bits (2118), Expect = 0.0
 Identities = 400/429 (93%), Positives = 407/429 (94%)
 Frame = +2

Query: 89   MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 268
            MREIVH+QAGQCGNQIGAKFWEVISDEHGIDPTG+YHGDSDLQLERINVYYNEA G KYV
Sbjct: 1    MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEAAGNKYV 60

Query: 269  PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 448
            PRA+LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 61   PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120

Query: 449  RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 628
            RKE+ESCDCLQGFQ                   KIREEYPDRIMNTFSV+PSPKVSDTVV
Sbjct: 121  RKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVV 180

Query: 629  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 808
            EPYNATLSVHQLVENTDETY IDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
Sbjct: 181  EPYNATLSVHQLVENTDETYSIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240

Query: 809  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 988
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFD+KNMM
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMM 300

Query: 989  AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 1168
            AACDPRHGRYLTVAA+FRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
Sbjct: 301  AACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 360

Query: 1169 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 1348
            LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361  LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 1349 EYQQYQDAT 1375
            EYQQYQDAT
Sbjct: 421  EYQQYQDAT 429


>ref|NP_006077.2| tubulin beta-3 chain isoform 1 [Homo sapiens].
          Length = 450

 Score =  790 bits (2041), Expect = 0.0
 Identities = 384/429 (89%), Positives = 398/429 (92%)
 Frame = +2

Query: 89   MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 268
            MREIVH+QAGQCGNQIGAKFWEVISDEHGIDP+G Y GDSDLQLERI+VYYNEA+  KYV
Sbjct: 1    MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPSGNYVGDSDLQLERISVYYNEASSHKYV 60

Query: 269  PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 448
            PRA+LVDLEPGTMDSVRSG FG +FRPDNF+FGQSGAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 61   PRAILVDLEPGTMDSVRSGAFGHLFRPDNFIFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120

Query: 449  RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 628
            RKE E+CDCLQGFQ                   K+REEYPDRIMNTFSVVPSPKVSDTVV
Sbjct: 121  RKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKVREEYPDRIMNTFSVVPSPKVSDTVV 180

Query: 629  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 808
            EPYNATLS+HQLVENTDETYCIDNEALYDICFRTLKL TPTYGDLNHLVSATMSGVTT L
Sbjct: 181  EPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKLATPTYGDLNHLVSATMSGVTTSL 240

Query: 809  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 988
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT+RGSQQYRALTVPELTQQMFDAKNMM
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMM 300

Query: 989  AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 1168
            AACDPRHGRYLTVA VFRGRMSMKEVDEQML +Q+KNSSYFVEWIPNNVK AVCDIPPRG
Sbjct: 301  AACDPRHGRYLTVATVFRGRMSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVCDIPPRG 360

Query: 1169 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 1348
            LKMS+TFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361  LKMSSTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 1349 EYQQYQDAT 1375
            EYQQYQDAT
Sbjct: 421  EYQQYQDAT 429


>ref|NP_115914.1| tubulin beta-6 chain [Homo sapiens].
          Length = 446

 Score =  779 bits (2012), Expect = 0.0
 Identities = 379/429 (88%), Positives = 395/429 (92%)
 Frame = +2

Query: 89   MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 268
            MREIVH+QAGQCGNQIG KFWEVISDEHGIDP G Y GDS LQLERINVYYNE++  KYV
Sbjct: 1    MREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGGYVGDSALQLERINVYYNESSSQKYV 60

Query: 269  PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 448
            PRA LVDLEPGTMDSVRSGPFGQ+FRPDNF+FGQ+GAGNNWAKGHYTEGAELVD+VLDVV
Sbjct: 61   PRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELVDAVLDVV 120

Query: 449  RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 628
            RKE E CDCLQGFQ                   KIREE+PDRIMNTFSV+PSPKVSDTVV
Sbjct: 121  RKECEHCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTFSVMPSPKVSDTVV 180

Query: 629  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 808
            EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT L
Sbjct: 181  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSL 240

Query: 809  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 988
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDA+NMM
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDARNMM 300

Query: 989  AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 1168
            AACDPRHGRYLTVA VFRG MSMKEVDEQML +Q+KNSSYFVEWIPNNVK AVCDIPPRG
Sbjct: 301  AACDPRHGRYLTVATVFRGPMSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVCDIPPRG 360

Query: 1169 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 1348
            LKM++TFIGNSTAIQELFKRISEQF+AMFRRKAFLHW+TGEGMDEMEFTEAESNMNDLVS
Sbjct: 361  LKMASTFIGNSTAIQELFKRISEQFSAMFRRKAFLHWFTGEGMDEMEFTEAESNMNDLVS 420

Query: 1349 EYQQYQDAT 1375
            EYQQYQDAT
Sbjct: 421  EYQQYQDAT 429


>ref|NP_817124.1| tubulin beta-8 chain isoform 1 [Homo sapiens].
          Length = 444

 Score =  777 bits (2007), Expect = 0.0
 Identities = 373/429 (86%), Positives = 394/429 (91%)
 Frame = +2

Query: 89   MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 268
            MREIV  Q GQCGNQIGAKFWEVISDEH ID  GTYHGDS LQLERINVYYNEA+GG+YV
Sbjct: 1    MREIVLTQIGQCGNQIGAKFWEVISDEHAIDSAGTYHGDSHLQLERINVYYNEASGGRYV 60

Query: 269  PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 448
            PRAVLVDLEPGTMDSVRSGPFGQ+FRPDNF+FGQ GAGNNWAKGHYTEGAEL++SV+DVV
Sbjct: 61   PRAVLVDLEPGTMDSVRSGPFGQVFRPDNFIFGQCGAGNNWAKGHYTEGAELMESVMDVV 120

Query: 449  RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 628
            RKEAESCDCLQGFQ                   KIREEYPDRI+NTFS++PSPKVSDTVV
Sbjct: 121  RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLLSKIREEYPDRIINTFSILPSPKVSDTVV 180

Query: 629  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 808
            EPYNATLSVHQL+EN DET+CIDNEALYDIC +TLKL TPTYGDLNHLVSATMSGVTTCL
Sbjct: 181  EPYNATLSVHQLIENADETFCIDNEALYDICSKTLKLPTPTYGDLNHLVSATMSGVTTCL 240

Query: 809  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 988
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTV ELTQQMFDAKNMM
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVAELTQQMFDAKNMM 300

Query: 989  AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 1168
            AACDPRHGRYLT AA+FRGRM M+EVDEQM N+Q+KNSSYF +W+PNNVKTAVCDIPPRG
Sbjct: 301  AACDPRHGRYLTAAAIFRGRMPMREVDEQMFNIQDKNSSYFADWLPNNVKTAVCDIPPRG 360

Query: 1169 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 1348
            LKMSATFIGN+TAIQELFKR+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361  LKMSATFIGNNTAIQELFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 1349 EYQQYQDAT 1375
            EYQQYQDAT
Sbjct: 421  EYQQYQDAT 429


>ref|NP_110400.1| tubulin beta-1 chain [Homo sapiens].
          Length = 451

 Score =  684 bits (1766), Expect = 0.0
 Identities = 329/428 (76%), Positives = 370/428 (86%)
 Frame = +2

Query: 89   MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 268
            MREIVH+Q GQCGNQIGAKFWE+I +EHGID  G+  G S LQLERI+VYYNEA G KYV
Sbjct: 1    MREIVHIQIGQCGNQIGAKFWEMIGEEHGIDLAGSDRGASALQLERISVYYNEAYGRKYV 60

Query: 269  PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 448
            PRAVLVDLEPGTMDS+RS   G +F+PD+FV G SGAGNNWAKGHYTEGAEL+++VL+VV
Sbjct: 61   PRAVLVDLEPGTMDSIRSSKLGALFQPDSFVHGNSGAGNNWAKGHYTEGAELIENVLEVV 120

Query: 449  RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 628
            R E+ESCDCLQGFQ                   KIREEYPDRIMN+FSV+PSPKVSDTVV
Sbjct: 121  RHESESCDCLQGFQIVHSLGGGTGSGMGTLLMNKIREEYPDRIMNSFSVMPSPKVSDTVV 180

Query: 629  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 808
            EPYNA LS+HQL+EN D  +CIDNEALYDICFRTLKLTTPTYGDLNHLVS TMSG+TT L
Sbjct: 181  EPYNAVLSIHQLIENADACFCIDNEALYDICFRTLKLTTPTYGDLNHLVSLTMSGITTSL 240

Query: 809  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 988
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT++GSQQYRAL+V ELTQQMFDA+N M
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTAQGSQQYRALSVAELTQQMFDARNTM 300

Query: 989  AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 1168
            AACD R GRYLTVA +FRG+MS KEVD+Q+L+VQ +NSS FVEWIPNNVK AVCDIPPRG
Sbjct: 301  AACDLRRGRYLTVACIFRGKMSTKEVDQQLLSVQTRNSSCFVEWIPNNVKVAVCDIPPRG 360

Query: 1169 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 1348
            L M+ATFIGN+TAIQE+F R+SE F+AMF+RKAF+HWYT EGMD  EF EAE+N++DLVS
Sbjct: 361  LSMAATFIGNNTAIQEIFNRVSEHFSAMFKRKAFVHWYTSEGMDINEFGEAENNIHDLVS 420

Query: 1349 EYQQYQDA 1372
            EYQQ+QDA
Sbjct: 421  EYQQFQDA 428


>ref|NP_001184110.1| tubulin beta-3 chain isoform 2 [Homo sapiens].
          Length = 378

 Score =  658 bits (1698), Expect = 0.0
 Identities = 321/357 (89%), Positives = 330/357 (92%)
 Frame = +2

Query: 305  MDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 484
            MDSVRSG FG +FRPDNF+FGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE E+CDCLQG
Sbjct: 1    MDSVRSGAFGHLFRPDNFIFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKECENCDCLQG 60

Query: 485  FQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQL 664
            FQ                   K+REEYPDRIMNTFSVVPSPKVSDTVVEPYNATLS+HQL
Sbjct: 61   FQLTHSLGGGTGSGMGTLLISKVREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSIHQL 120

Query: 665  VENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRK 844
            VENTDETYCIDNEALYDICFRTLKL TPTYGDLNHLVSATMSGVTT LRFPGQLNADLRK
Sbjct: 121  VENTDETYCIDNEALYDICFRTLKLATPTYGDLNHLVSATMSGVTTSLRFPGQLNADLRK 180

Query: 845  LAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLT 1024
            LAVNMVPFPRLHFFMPGFAPLT+RGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLT
Sbjct: 181  LAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLT 240

Query: 1025 VAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNST 1204
            VA VFRGRMSMKEVDEQML +Q+KNSSYFVEWIPNNVK AVCDIPPRGLKMS+TFIGNST
Sbjct: 241  VATVFRGRMSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVCDIPPRGLKMSSTFIGNST 300

Query: 1205 AIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDAT 1375
            AIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDAT
Sbjct: 301  AIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDAT 357


  Database: RefSeq49_HP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,297,164
  Number of sequences in database:  32,964
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 46,175,592
Number of extensions: 1083700
Number of successful extensions: 4825
Number of sequences better than 1.0e-05: 28
Number of HSP's gapped: 4741
Number of HSP's successfully gapped: 28
Length of query: 529
Length of database: 18,297,164
Length adjustment: 107
Effective length of query: 422
Effective length of database: 14,770,016
Effective search space: 6232946752
Effective search space used: 6232946752
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-006965
         (1588 letters)

Database: RefSeq49_MP.fasta 
           30,036 sequences; 15,617,559 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_666228.1| tubulin beta-2C chain [Mus musculus].                835   0.0  
Alignment   gi|NP_035785.1| tubulin beta-5 chain [Mus musculus].                 826   0.0  
Alignment   gi|NP_076205.1| tubulin beta-2B chain [Mus musculus].                826   0.0  
Alignment   gi|NP_033477.2| tubulin beta-4 chain [Mus musculus].                 825   0.0  
Alignment   gi|NP_033476.1| tubulin beta-2A chain [Mus musculus].                820   0.0  
Alignment   gi|NP_075768.1| tubulin beta-3 chain [Mus musculus].                 790   0.0  
Alignment   gi|NP_080749.2| tubulin beta-6 chain [Mus musculus].                 779   0.0  
Alignment   gi|XP_003086598.1| PREDICTED: tubulin beta-3 chain-like [Mus mu...   740   0.0  
Alignment   gi|XP_003084702.1| PREDICTED: tubulin beta-3 chain-like [Mus mu...   737   0.0  
Alignment   gi|NP_001074440.1| tubulin, beta 1 [Mus musculus].                   690   0.0  

>ref|NP_666228.1| tubulin beta-2C chain [Mus musculus].
          Length = 445

 Score =  835 bits (2156), Expect = 0.0
 Identities = 410/429 (95%), Positives = 410/429 (95%)
 Frame = +2

Query: 89   MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 268
            MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV
Sbjct: 1    MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60

Query: 269  PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 448
            PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 61   PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120

Query: 449  RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 628
            RKEAESCDCLQGFQ                   KIREEYPDRIMNTFSVVPSPKVSDTVV
Sbjct: 121  RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV 180

Query: 629  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 808
            EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
Sbjct: 181  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240

Query: 809  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 988
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 300

Query: 989  AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 1168
            AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
Sbjct: 301  AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 360

Query: 1169 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 1348
            LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361  LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 1349 EYQQYQDAT 1375
            EYQQYQDAT
Sbjct: 421  EYQQYQDAT 429


>ref|NP_035785.1| tubulin beta-5 chain [Mus musculus].
          Length = 444

 Score =  826 bits (2134), Expect = 0.0
 Identities = 403/429 (93%), Positives = 409/429 (95%)
 Frame = +2

Query: 89   MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 268
            MREIVH+QAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL+RI+VYYNEATGGKYV
Sbjct: 1    MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYV 60

Query: 269  PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 448
            PRA+LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 61   PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120

Query: 449  RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 628
            RKEAESCDCLQGFQ                   KIREEYPDRIMNTFSVVPSPKVSDTVV
Sbjct: 121  RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV 180

Query: 629  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 808
            EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
Sbjct: 181  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240

Query: 809  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 988
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQ+FDAKNMM
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMM 300

Query: 989  AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 1168
            AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
Sbjct: 301  AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 360

Query: 1169 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 1348
            LKM+ TFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361  LKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 1349 EYQQYQDAT 1375
            EYQQYQDAT
Sbjct: 421  EYQQYQDAT 429


>ref|NP_076205.1| tubulin beta-2B chain [Mus musculus].
          Length = 445

 Score =  826 bits (2133), Expect = 0.0
 Identities = 402/429 (93%), Positives = 409/429 (95%)
 Frame = +2

Query: 89   MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 268
            MREIVH+QAGQCGNQIGAKFWEVISDEHGIDPTG+YHGDSDLQLERINVYYNEATG KYV
Sbjct: 1    MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEATGNKYV 60

Query: 269  PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 448
            PRA+LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 61   PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120

Query: 449  RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 628
            RKE+ESCDCLQGFQ                   KIREEYPDRIMNTFSV+PSPKVSDTVV
Sbjct: 121  RKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVV 180

Query: 629  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 808
            EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
Sbjct: 181  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240

Query: 809  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 988
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFD+KNMM
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMM 300

Query: 989  AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 1168
            AACDPRHGRYLTVAA+FRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
Sbjct: 301  AACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 360

Query: 1169 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 1348
            LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361  LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 1349 EYQQYQDAT 1375
            EYQQYQDAT
Sbjct: 421  EYQQYQDAT 429


>ref|NP_033477.2| tubulin beta-4 chain [Mus musculus].
          Length = 444

 Score =  825 bits (2131), Expect = 0.0
 Identities = 404/429 (94%), Positives = 409/429 (95%)
 Frame = +2

Query: 89   MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 268
            MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGG YV
Sbjct: 1    MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGNYV 60

Query: 269  PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 448
            PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDVV
Sbjct: 61   PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDAVLDVV 120

Query: 449  RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 628
            RKEAESCDCLQGFQ                   KIREE+PDRIMNTFSVVPSPKVSDTVV
Sbjct: 121  RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTFSVVPSPKVSDTVV 180

Query: 629  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 808
            EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
Sbjct: 181  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240

Query: 809  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 988
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 300

Query: 989  AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 1168
            AACDPRHGRYLTVAAVFRGRMSMKEVDEQML+VQ+KNSSYFVEWIPNNVKTAVCDIPPRG
Sbjct: 301  AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLSVQSKNSSYFVEWIPNNVKTAVCDIPPRG 360

Query: 1169 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 1348
            LKM+ATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361  LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 1349 EYQQYQDAT 1375
            EYQQYQDAT
Sbjct: 421  EYQQYQDAT 429


>ref|NP_033476.1| tubulin beta-2A chain [Mus musculus].
          Length = 445

 Score =  820 bits (2118), Expect = 0.0
 Identities = 400/429 (93%), Positives = 407/429 (94%)
 Frame = +2

Query: 89   MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 268
            MREIVH+QAGQCGNQIGAKFWEVISDEHGIDPTG+YHGDSDLQLERINVYYNEA G KYV
Sbjct: 1    MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEAAGNKYV 60

Query: 269  PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 448
            PRA+LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 61   PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120

Query: 449  RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 628
            RKE+ESCDCLQGFQ                   KIREEYPDRIMNTFSV+PSPKVSDTVV
Sbjct: 121  RKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVV 180

Query: 629  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 808
            EPYNATLSVHQLVENTDETY IDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
Sbjct: 181  EPYNATLSVHQLVENTDETYSIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240

Query: 809  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 988
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFD+KNMM
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMM 300

Query: 989  AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 1168
            AACDPRHGRYLTVAA+FRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
Sbjct: 301  AACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 360

Query: 1169 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 1348
            LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361  LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 1349 EYQQYQDAT 1375
            EYQQYQDAT
Sbjct: 421  EYQQYQDAT 429


>ref|NP_075768.1| tubulin beta-3 chain [Mus musculus].
          Length = 450

 Score =  790 bits (2041), Expect = 0.0
 Identities = 384/429 (89%), Positives = 398/429 (92%)
 Frame = +2

Query: 89   MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 268
            MREIVH+QAGQCGNQIGAKFWEVISDEHGIDP+G Y GDSDLQLERI+VYYNEA+  KYV
Sbjct: 1    MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPSGNYVGDSDLQLERISVYYNEASSHKYV 60

Query: 269  PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 448
            PRA+LVDLEPGTMDSVRSG FG +FRPDNF+FGQSGAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 61   PRAILVDLEPGTMDSVRSGAFGHLFRPDNFIFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120

Query: 449  RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 628
            RKE E+CDCLQGFQ                   K+REEYPDRIMNTFSVVPSPKVSDTVV
Sbjct: 121  RKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKVREEYPDRIMNTFSVVPSPKVSDTVV 180

Query: 629  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 808
            EPYNATLS+HQLVENTDETYCIDNEALYDICFRTLKL TPTYGDLNHLVSATMSGVTT L
Sbjct: 181  EPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKLATPTYGDLNHLVSATMSGVTTSL 240

Query: 809  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 988
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT+RGSQQYRALTVPELTQQMFDAKNMM
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMM 300

Query: 989  AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 1168
            AACDPRHGRYLTVA VFRGRMSMKEVDEQML +Q+KNSSYFVEWIPNNVK AVCDIPPRG
Sbjct: 301  AACDPRHGRYLTVATVFRGRMSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVCDIPPRG 360

Query: 1169 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 1348
            LKMS+TFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361  LKMSSTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 1349 EYQQYQDAT 1375
            EYQQYQDAT
Sbjct: 421  EYQQYQDAT 429


>ref|NP_080749.2| tubulin beta-6 chain [Mus musculus].
          Length = 447

 Score =  779 bits (2011), Expect = 0.0
 Identities = 380/429 (88%), Positives = 394/429 (91%)
 Frame = +2

Query: 89   MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 268
            MREIVH+QAGQCGNQIG KFWEVISDEHGID  G Y GDS LQLERI+VYYNE++  KYV
Sbjct: 1    MREIVHIQAGQCGNQIGTKFWEVISDEHGIDQAGGYVGDSALQLERISVYYNESSSKKYV 60

Query: 269  PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 448
            PRA LVDLEPGTMDSVRSGPFGQ+FRPDNF+FGQ+GAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 61   PRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELVDSVLDVV 120

Query: 449  RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 628
            RKE E CDCLQGFQ                   KIREEYPDRIMNTFSV+PSPKVSDTVV
Sbjct: 121  RKECEHCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVV 180

Query: 629  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 808
            EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT L
Sbjct: 181  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSL 240

Query: 809  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 988
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT+RGSQQYRALTVPELTQQMFDAKNMM
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMM 300

Query: 989  AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 1168
            AACDPRHGRYLTVA VFRG MSMKEVDEQML +QNKNSSYFVEWIPNNVK AVCDIPPRG
Sbjct: 301  AACDPRHGRYLTVATVFRGPMSMKEVDEQMLAIQNKNSSYFVEWIPNNVKVAVCDIPPRG 360

Query: 1169 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 1348
            LKM++TFIGNSTAIQELFKRISEQF+AMFRRKAFLHW+TGEGMDEMEFTEAESNMNDLVS
Sbjct: 361  LKMASTFIGNSTAIQELFKRISEQFSAMFRRKAFLHWFTGEGMDEMEFTEAESNMNDLVS 420

Query: 1349 EYQQYQDAT 1375
            EYQQYQDAT
Sbjct: 421  EYQQYQDAT 429


>ref|XP_003086598.1| PREDICTED: tubulin beta-3 chain-like [Mus musculus].
          Length = 443

 Score =  740 bits (1910), Expect = 0.0
 Identities = 362/429 (84%), Positives = 383/429 (89%)
 Frame = +2

Query: 89   MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 268
            MREIVH+QAGQCGNQIGAKFWEVISD+HGIDP+G Y GDSDLQLERI++YYNEA+  KYV
Sbjct: 1    MREIVHIQAGQCGNQIGAKFWEVISDDHGIDPSGNYVGDSDLQLERISMYYNEASSHKYV 60

Query: 269  PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 448
            PRA+ V LEPGTMDSVRSG FG +FRPDNF+F QSG GNNWAKGHY EGAEL DSVLDVV
Sbjct: 61   PRAIRVYLEPGTMDSVRSGAFGHLFRPDNFIFDQSGTGNNWAKGHYREGAELEDSVLDVV 120

Query: 449  RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 628
            +K+ E+CDCLQGFQ                   K+REEYPDRIMNTFSVVPSPKVSDTVV
Sbjct: 121  QKQCENCDCLQGFQLTHSLGGGTLLIS------KVREEYPDRIMNTFSVVPSPKVSDTVV 174

Query: 629  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 808
            EPYNATLS+HQLVEN DETYCIDNEALY ICFRT+KL TPT+GDLNHLVSATMSGVTT L
Sbjct: 175  EPYNATLSIHQLVENMDETYCIDNEALYYICFRTVKLATPTHGDLNHLVSATMSGVTTSL 234

Query: 809  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 988
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGF PLT+RGSQQYRALTVPELTQQMFDAKNMM
Sbjct: 235  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFTPLTARGSQQYRALTVPELTQQMFDAKNMM 294

Query: 989  AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 1168
            AACDP HGRYLTVA VFRGRMSMKEVDEQML +Q+KNSSY VEWIPNNV  AVCDIPPRG
Sbjct: 295  AACDPHHGRYLTVATVFRGRMSMKEVDEQMLAIQSKNSSYLVEWIPNNVNVAVCDIPPRG 354

Query: 1169 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 1348
            LKMS+TFIGNSTAIQELFK ISEQFTAMFR KAFLHWYTGEGMDE+EFTEAESNMNDLV 
Sbjct: 355  LKMSSTFIGNSTAIQELFKCISEQFTAMFRCKAFLHWYTGEGMDEIEFTEAESNMNDLVF 414

Query: 1349 EYQQYQDAT 1375
            EYQQYQDAT
Sbjct: 415  EYQQYQDAT 423


>ref|XP_003084702.1| PREDICTED: tubulin beta-3 chain-like [Mus musculus].
          Length = 443

 Score =  737 bits (1902), Expect = 0.0
 Identities = 360/429 (83%), Positives = 382/429 (89%)
 Frame = +2

Query: 89   MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 268
            MREIVH+QAGQCGNQIGAKFWEVISD+HGIDP+G Y GDSDLQLERI++YYNEA+  KY+
Sbjct: 1    MREIVHIQAGQCGNQIGAKFWEVISDDHGIDPSGNYVGDSDLQLERISMYYNEASSHKYL 60

Query: 269  PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 448
            PRA+LV LEPGTMDSVRSG FG +FRPDNF+FGQSG GNNWAKGHY EGAEL DSVLDVV
Sbjct: 61   PRAILVYLEPGTMDSVRSGAFGHLFRPDNFIFGQSGTGNNWAKGHYREGAELEDSVLDVV 120

Query: 449  RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 628
            RK+ E+CDCLQGFQ                   K+REEYPDRIMNTFSVVPSPKVSDTVV
Sbjct: 121  RKQCENCDCLQGFQLTHSLGGGTLLIS------KVREEYPDRIMNTFSVVPSPKVSDTVV 174

Query: 629  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 808
            EPYNA+LS+HQLVEN DETYCI+NEALYDICFRT+KL TPTYGDLNHLVSATMSGVTT L
Sbjct: 175  EPYNASLSIHQLVENMDETYCINNEALYDICFRTVKLATPTYGDLNHLVSATMSGVTTSL 234

Query: 809  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 988
            RFPGQLNADLRK AVNM PFPRLHFFMPGFAPLT RGSQQYRALTVPELTQ MFDAKNMM
Sbjct: 235  RFPGQLNADLRKQAVNMXPFPRLHFFMPGFAPLTDRGSQQYRALTVPELTQXMFDAKNMM 294

Query: 989  AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 1168
            AA DPRHGRYLTVA VFRGRMSMKEVDEQML +Q+KNSSY VEWIPNNV  AVCDIPPRG
Sbjct: 295  AAYDPRHGRYLTVATVFRGRMSMKEVDEQMLAIQSKNSSYLVEWIPNNVNVAVCDIPPRG 354

Query: 1169 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 1348
            +KMS+TFIGNSTA QELFK ISEQFTAMFR KAFLHWYTGEGMDE+EFTEAESNMNDLV 
Sbjct: 355  IKMSSTFIGNSTATQELFKCISEQFTAMFRCKAFLHWYTGEGMDEIEFTEAESNMNDLVF 414

Query: 1349 EYQQYQDAT 1375
            EYQQYQDAT
Sbjct: 415  EYQQYQDAT 423


>ref|NP_001074440.1| tubulin, beta 1 [Mus musculus].
          Length = 451

 Score =  690 bits (1781), Expect = 0.0
 Identities = 328/427 (76%), Positives = 374/427 (87%)
 Frame = +2

Query: 89   MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 268
            MREIVH+Q GQCGNQIGAKFWEVI +EHGID  G+Y G S LQLERI+VYYNEA G KYV
Sbjct: 1    MREIVHIQIGQCGNQIGAKFWEVIGEEHGIDCAGSYCGTSALQLERISVYYNEAYGKKYV 60

Query: 269  PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 448
            PRAVLVDLEPGTMDS+RS   G +F+PD+FV G SGAGNNWAKGHYTEGAEL+++V+DVV
Sbjct: 61   PRAVLVDLEPGTMDSIRSSRLGVLFQPDSFVHGNSGAGNNWAKGHYTEGAELIENVMDVV 120

Query: 449  RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 628
            R+E+ESCDCLQGFQ                   KIREEYPDRI+N+FSV+PSPKVSDTVV
Sbjct: 121  RRESESCDCLQGFQIVHSLGGGTGSGMGTLLMNKIREEYPDRILNSFSVMPSPKVSDTVV 180

Query: 629  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 808
            EPYNA LS+HQL+ENTD  +CIDNEALYDICFRTL+LTTPTYGDLNHLVS TMSG+TT L
Sbjct: 181  EPYNAVLSIHQLIENTDACFCIDNEALYDICFRTLRLTTPTYGDLNHLVSLTMSGITTSL 240

Query: 809  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 988
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT++GSQQYRAL+V ELTQQMFDA+N+M
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTAQGSQQYRALSVAELTQQMFDARNIM 300

Query: 989  AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 1168
            AACDPR GRYLTVA +FRG+MS KEVD+Q+L++Q +NS+ FVEWIPNNVK AVCDIPPRG
Sbjct: 301  AACDPRRGRYLTVACIFRGKMSTKEVDQQLLSIQTRNSNCFVEWIPNNVKVAVCDIPPRG 360

Query: 1169 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 1348
            L M+ATF+GN+TAIQELF R+SE F+AMFRR+AF+HWYT EGMD  EF EAES+++DLVS
Sbjct: 361  LNMAATFLGNNTAIQELFTRVSEHFSAMFRRRAFVHWYTSEGMDISEFGEAESDIHDLVS 420

Query: 1349 EYQQYQD 1369
            EYQQ+QD
Sbjct: 421  EYQQFQD 427


  Database: RefSeq49_MP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 15,617,559
  Number of sequences in database:  30,036
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 38,984,872
Number of extensions: 900333
Number of successful extensions: 4075
Number of sequences better than 1.0e-05: 28
Number of HSP's gapped: 3983
Number of HSP's successfully gapped: 28
Length of query: 529
Length of database: 15,617,559
Length adjustment: 106
Effective length of query: 423
Effective length of database: 12,433,743
Effective search space: 5259473289
Effective search space used: 5259473289
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-006965
         (1588 letters)

Database: RefSeq49_SP.fasta 
           24,897 sequences; 11,343,932 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_003122400.2| PREDICTED: tubulin beta-2C chain-like [Sus s...   835   0.0  
Alignment   gi|NP_001038077.1| tubulin beta chain [Sus scrofa].                  826   0.0  
Alignment   gi|NP_001230363.1| tubulin beta-2B chain [Sus scrofa].               826   0.0  
Alignment   gi|NP_001107168.1| tubulin beta-1 chain [Sus scrofa].                686   0.0  
Alignment   gi|XP_003355769.1| PREDICTED: tubulin beta-3 chain-like [Sus sc...   658   0.0  
Alignment   gi|XP_003356561.1| PREDICTED: tubulin beta-2A chain-like [Sus s...   631   0.0  
Alignment   gi|XP_003123158.2| PREDICTED: far upstream element-binding prot...   635   0.0  
Alignment   gi|XP_003356396.1| PREDICTED: tubulin beta-6 chain-like, partia...   615   e-176
Alignment   gi|XP_003355423.1| PREDICTED: tubulin alpha-1C chain isoform 1 ...   343   1e-94
Alignment   gi|NP_001038009.1| tubulin alpha-1B chain [Sus scrofa].              343   2e-94

>ref|XP_003122400.2| PREDICTED: tubulin beta-2C chain-like [Sus scrofa].
          Length = 445

 Score =  835 bits (2156), Expect = 0.0
 Identities = 410/429 (95%), Positives = 410/429 (95%)
 Frame = +2

Query: 89   MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 268
            MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV
Sbjct: 1    MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60

Query: 269  PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 448
            PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 61   PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120

Query: 449  RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 628
            RKEAESCDCLQGFQ                   KIREEYPDRIMNTFSVVPSPKVSDTVV
Sbjct: 121  RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV 180

Query: 629  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 808
            EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
Sbjct: 181  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240

Query: 809  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 988
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 300

Query: 989  AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 1168
            AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
Sbjct: 301  AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 360

Query: 1169 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 1348
            LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361  LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 1349 EYQQYQDAT 1375
            EYQQYQDAT
Sbjct: 421  EYQQYQDAT 429


>ref|NP_001038077.1| tubulin beta chain [Sus scrofa].
          Length = 444

 Score =  826 bits (2134), Expect = 0.0
 Identities = 403/429 (93%), Positives = 409/429 (95%)
 Frame = +2

Query: 89   MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 268
            MREIVH+QAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL+RI+VYYNEATGGKYV
Sbjct: 1    MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYV 60

Query: 269  PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 448
            PRA+LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 61   PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120

Query: 449  RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 628
            RKEAESCDCLQGFQ                   KIREEYPDRIMNTFSVVPSPKVSDTVV
Sbjct: 121  RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV 180

Query: 629  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 808
            EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
Sbjct: 181  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240

Query: 809  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 988
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQ+FDAKNMM
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMM 300

Query: 989  AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 1168
            AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
Sbjct: 301  AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 360

Query: 1169 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 1348
            LKM+ TFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361  LKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 1349 EYQQYQDAT 1375
            EYQQYQDAT
Sbjct: 421  EYQQYQDAT 429


>ref|NP_001230363.1| tubulin beta-2B chain [Sus scrofa].
          Length = 445

 Score =  826 bits (2133), Expect = 0.0
 Identities = 402/429 (93%), Positives = 409/429 (95%)
 Frame = +2

Query: 89   MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 268
            MREIVH+QAGQCGNQIGAKFWEVISDEHGIDPTG+YHGDSDLQLERINVYYNEATG KYV
Sbjct: 1    MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEATGNKYV 60

Query: 269  PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 448
            PRA+LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 61   PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120

Query: 449  RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 628
            RKE+ESCDCLQGFQ                   KIREEYPDRIMNTFSV+PSPKVSDTVV
Sbjct: 121  RKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVV 180

Query: 629  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 808
            EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
Sbjct: 181  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240

Query: 809  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 988
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFD+KNMM
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMM 300

Query: 989  AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 1168
            AACDPRHGRYLTVAA+FRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
Sbjct: 301  AACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 360

Query: 1169 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 1348
            LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361  LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 1349 EYQQYQDAT 1375
            EYQQYQDAT
Sbjct: 421  EYQQYQDAT 429


>ref|NP_001107168.1| tubulin beta-1 chain [Sus scrofa].
          Length = 449

 Score =  686 bits (1770), Expect = 0.0
 Identities = 330/428 (77%), Positives = 365/428 (85%)
 Frame = +2

Query: 89   MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 268
            MREIVH+Q GQCGNQIG+KFWEVI +EHGID  G+Y GD  +QLERI+VYYNEA G KYV
Sbjct: 1    MREIVHIQIGQCGNQIGSKFWEVIGEEHGIDGAGSYRGDCSVQLERISVYYNEAHGKKYV 60

Query: 269  PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 448
            PRAVLVDLEPGTMDS+RS   G +FRPD+FV G SGAGNNWAKGHYTEGAELV+ VLD V
Sbjct: 61   PRAVLVDLEPGTMDSIRSSRLGALFRPDSFVHGNSGAGNNWAKGHYTEGAELVEGVLDAV 120

Query: 449  RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 628
            R EAE CDCLQGFQ                   KIREE+PDRI+N+FSV+PS KVSDTVV
Sbjct: 121  RSEAEGCDCLQGFQVVHSLGGGTGSGMGTLLMGKIREEFPDRILNSFSVMPSAKVSDTVV 180

Query: 629  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 808
            EPYNA LS+HQL++N D  +CIDNEALYDIC RTL+LTTPTYGDLNHLVS TMSGVTT L
Sbjct: 181  EPYNAVLSIHQLLQNADACFCIDNEALYDICCRTLRLTTPTYGDLNHLVSLTMSGVTTSL 240

Query: 809  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 988
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT++GSQQYRALTV ELTQQMFDA+N M
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTAQGSQQYRALTVAELTQQMFDARNTM 300

Query: 989  AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 1168
             ACDPR GRYLTVA +FRG+MS KEVDEQ+L VQ +NSS FVEWIPNN+K AVCDIPPRG
Sbjct: 301  TACDPRRGRYLTVACIFRGQMSTKEVDEQLLTVQTRNSSCFVEWIPNNLKVAVCDIPPRG 360

Query: 1169 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 1348
            L M+ATFIGNSTAIQELF R+SE F+AMF+RKAF+HWYTGEGMD  EF EAES++ DLVS
Sbjct: 361  LSMAATFIGNSTAIQELFGRVSEHFSAMFKRKAFVHWYTGEGMDVSEFVEAESDIRDLVS 420

Query: 1349 EYQQYQDA 1372
            EYQQ+QDA
Sbjct: 421  EYQQFQDA 428


>ref|XP_003355769.1| PREDICTED: tubulin beta-3 chain-like [Sus scrofa].
          Length = 378

 Score =  658 bits (1698), Expect = 0.0
 Identities = 321/357 (89%), Positives = 330/357 (92%)
 Frame = +2

Query: 305  MDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 484
            MDSVRSG FG +FRPDNF+FGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE E+CDCLQG
Sbjct: 1    MDSVRSGAFGHLFRPDNFIFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKECENCDCLQG 60

Query: 485  FQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQL 664
            FQ                   K+REEYPDRIMNTFSVVPSPKVSDTVVEPYNATLS+HQL
Sbjct: 61   FQLTHSLGGGTGSGMGTLLISKVREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSIHQL 120

Query: 665  VENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRK 844
            VENTDETYCIDNEALYDICFRTLKL TPTYGDLNHLVSATMSGVTT LRFPGQLNADLRK
Sbjct: 121  VENTDETYCIDNEALYDICFRTLKLATPTYGDLNHLVSATMSGVTTSLRFPGQLNADLRK 180

Query: 845  LAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLT 1024
            LAVNMVPFPRLHFFMPGFAPLT+RGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLT
Sbjct: 181  LAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLT 240

Query: 1025 VAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNST 1204
            VA VFRGRMSMKEVDEQML +Q+KNSSYFVEWIPNNVK AVCDIPPRGLKMS+TFIGNST
Sbjct: 241  VATVFRGRMSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVCDIPPRGLKMSSTFIGNST 300

Query: 1205 AIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDAT 1375
            AIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDAT
Sbjct: 301  AIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDAT 357


>ref|XP_003356561.1| PREDICTED: tubulin beta-2A chain-like [Sus scrofa].
          Length = 416

 Score =  631 bits (1628), Expect(2) = 0.0
 Identities = 311/335 (92%), Positives = 315/335 (94%)
 Frame = +2

Query: 371  SGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXK 550
            SGAGNNWAKGHYTEGAELVDSVLDVVRKE+ESCDCLQGFQ                   K
Sbjct: 66   SGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQLTHSLGGGTGSGMGTLLISK 125

Query: 551  IREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRT 730
            IREEYPDRIMNTFSV+PSPKVSDTVVEPYNATLSVHQLVENTDETY IDNEALYDICFRT
Sbjct: 126  IREEYPDRIMNTFSVMPSPKVSDTVVEPYNATLSVHQLVENTDETYSIDNEALYDICFRT 185

Query: 731  LKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT 910
            LKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT
Sbjct: 186  LKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT 245

Query: 911  SRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQ 1090
            SRGSQQYRALTVPELTQQMFD+KNMMAACDPRHGRYLTVAA+FRGRMSMKEVDEQMLNVQ
Sbjct: 246  SRGSQQYRALTVPELTQQMFDSKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQ 305

Query: 1091 NKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAF 1270
            NKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAF
Sbjct: 306  NKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAF 365

Query: 1271 LHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDAT 1375
            LHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDAT
Sbjct: 366  LHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDAT 400



 Score = 30.0 bits (66), Expect(2) = 0.0
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = +3

Query: 246 RPPVASTCLAPCSWTLSRAPWT 311
           +P V S C  P  W  SRAPWT
Sbjct: 26  KPLVTSMCPGPSWWIWSRAPWT 47


>ref|XP_003123158.2| PREDICTED: far upstream element-binding protein 2-like [Sus scrofa].
          Length = 930

 Score =  635 bits (1639), Expect = 0.0
 Identities = 313/337 (92%), Positives = 318/337 (94%)
 Frame = +2

Query: 365  GQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXX 544
            GQSGAGNNWAKGHYTEGAELVD+VLDVVRKEAESCDCLQGFQ                  
Sbjct: 579  GQSGAGNNWAKGHYTEGAELVDAVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLI 638

Query: 545  XKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICF 724
             KIREE+PDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICF
Sbjct: 639  SKIREEFPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICF 698

Query: 725  RTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAP 904
            RTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAP
Sbjct: 699  RTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAP 758

Query: 905  LTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLN 1084
            LTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQML+
Sbjct: 759  LTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLS 818

Query: 1085 VQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRK 1264
            VQ+KNSSYFVEWIPNNVKTAVCDIPPRGLKM+ATFIGNSTAIQELFKRISEQFTAMFRRK
Sbjct: 819  VQSKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRK 878

Query: 1265 AFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDAT 1375
            AFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDAT
Sbjct: 879  AFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDAT 915


>ref|XP_003356396.1| PREDICTED: tubulin beta-6 chain-like, partial [Sus scrofa].
          Length = 366

 Score =  615 bits (1586), Expect = e-176
 Identities = 302/340 (88%), Positives = 313/340 (92%)
 Frame = +2

Query: 356  FVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXX 535
            F+ GQ+GAGNNWAKGHYTEGAEL+DSVLDVVRKE+E CDCLQGFQ               
Sbjct: 10   FIPGQTGAGNNWAKGHYTEGAELMDSVLDVVRKESEHCDCLQGFQLTHSLGGGTGSGMGT 69

Query: 536  XXXXKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYD 715
                KIREE+PDRIMNTFSV+PSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYD
Sbjct: 70   LLISKIREEFPDRIMNTFSVMPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYD 129

Query: 716  ICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPG 895
            ICFRTLKLTTPTYGDLNHLVSATMSGVTT LRFPGQLNADLRKLAVNMVPFPRLHFFMPG
Sbjct: 130  ICFRTLKLTTPTYGDLNHLVSATMSGVTTSLRFPGQLNADLRKLAVNMVPFPRLHFFMPG 189

Query: 896  FAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQ 1075
            FAPLT+RGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVA VFRG MSMKEVDEQ
Sbjct: 190  FAPLTARGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVATVFRGPMSMKEVDEQ 249

Query: 1076 MLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMF 1255
            ML +QNKNSSYFVEWIPNNVK AVCDIPP GLKM+ATFIGNSTAIQELFKRISEQF+AMF
Sbjct: 250  MLAIQNKNSSYFVEWIPNNVKVAVCDIPPCGLKMAATFIGNSTAIQELFKRISEQFSAMF 309

Query: 1256 RRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDAT 1375
            RRKAFLHW+TGEGMDEMEFTEAESNMNDLVSEYQQYQDAT
Sbjct: 310  RRKAFLHWFTGEGMDEMEFTEAESNMNDLVSEYQQYQDAT 349


>ref|XP_003355423.1| PREDICTED: tubulin alpha-1C chain isoform 1 [Sus scrofa].
          Length = 449

 Score =  343 bits (881), Expect = 1e-94
 Identities = 169/434 (38%), Positives = 251/434 (57%), Gaps = 10/434 (2%)
 Frame = +2

Query: 89   MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNEATGGK 262
            MRE + +  GQ G QIG   WE+   EHGI P G    D  +    +  N +++E   GK
Sbjct: 1    MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60

Query: 263  YVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 442
            +VPRAV VDLEP  +D VR+G + Q+F P+  + G+  A NN+A+GHYT G E++D VLD
Sbjct: 61   HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 120

Query: 443  VVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDT 622
             +RK A+ C  LQGF                    ++  +Y  +    FS+ P+P+VS  
Sbjct: 121  RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 180

Query: 623  VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT 802
            VVEPYN+ L+ H  +E++D  + +DNEA+YDIC R L +  PTY +LN L+S  +S +T 
Sbjct: 181  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLMSQIVSSITA 240

Query: 803  CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKN 982
             LRF G LN DL +   N+VP+PR+HF +  +AP+ S     +  LTV E+T   F+  N
Sbjct: 241  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPAN 300

Query: 983  MMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPP 1162
             M  CDPRHG+Y+    ++RG +  K+V+  +  ++ K S  FV+W P   K  +   PP
Sbjct: 301  QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPP 360

Query: 1163 --------RGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTE 1318
                      ++ +   + N+TAI E + R+  +F  M+ ++AF+HWY GEGM+E EF+E
Sbjct: 361  TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420

Query: 1319 AESNMNDLVSEYQQ 1360
            A  +M  L  +Y++
Sbjct: 421  AREDMAALEKDYEE 434


>ref|NP_001038009.1| tubulin alpha-1B chain [Sus scrofa].
          Length = 451

 Score =  343 bits (879), Expect = 2e-94
 Identities = 168/434 (38%), Positives = 251/434 (57%), Gaps = 10/434 (2%)
 Frame = +2

Query: 89   MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNEATGGK 262
            MRE + +  GQ G QIG   WE+   EHGI P G    D  +    +  N +++E   GK
Sbjct: 1    MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60

Query: 263  YVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 442
            +VPRAV VDLEP  +D VR+G + Q+F P+  + G+  A NN+A+GHYT G E++D VLD
Sbjct: 61   HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 120

Query: 443  VVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDT 622
             +RK A+ C  LQGF                    ++  +Y  +    FS+ P+P+VS  
Sbjct: 121  RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 180

Query: 623  VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT 802
            VVEPYN+ L+ H  +E++D  + +DNEA+YDIC R L +  PTY +LN L+S  +S +T 
Sbjct: 181  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA 240

Query: 803  CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKN 982
             LRF G LN DL +   N+VP+PR+HF +  +AP+ S     +  L+V E+T   F+  N
Sbjct: 241  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 300

Query: 983  MMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPP 1162
             M  CDPRHG+Y+    ++RG +  K+V+  +  ++ K S  FV+W P   K  +   PP
Sbjct: 301  QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPP 360

Query: 1163 --------RGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTE 1318
                      ++ +   + N+TAI E + R+  +F  M+ ++AF+HWY GEGM+E EF+E
Sbjct: 361  TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420

Query: 1319 AESNMNDLVSEYQQ 1360
            A  +M  L  +Y++
Sbjct: 421  AREDMAALEKDYEE 434


  Database: RefSeq49_SP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 11,343,932
  Number of sequences in database:  24,897
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 29,791,038
Number of extensions: 790096
Number of successful extensions: 3144
Number of sequences better than 1.0e-05: 29
Number of HSP's gapped: 3070
Number of HSP's successfully gapped: 31
Length of query: 529
Length of database: 11,343,932
Length adjustment: 104
Effective length of query: 425
Effective length of database: 8,754,644
Effective search space: 3720723700
Effective search space used: 3720723700
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-006965
         (1588 letters)

Database: Sscrofa_10.2.fasta 
           4582 sequences; 2,808,509,378 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Sscrofa_Chr01                                                        2008   0.0  
Sscrofa_Chr07                                                        1701   0.0  
Sscrofa_Chr06                                                        1469   0.0  
Sscrofa_Chr02                                                        1431   0.0  
Sscrofa_Chr17                                                         773   0.0  
gb|GL895527.2| Sus scrofa unplaced genomic scaffold ChrUScaf3411      206   3e-50

>Sscrofa_Chr01 
||          Length = 315321322

 Score = 2008 bits (1013), Expect = 0.0
 Identities = 1013/1013 (100%)
 Strand = Plus / Minus

                                                                             
Query: 365       ggtcagagtggtgccgggaacaactgggccaaggggcactacacagaaggcgcagagctt 424
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314136555 ggtcagagtggtgccgggaacaactgggccaaggggcactacacagaaggcgcagagctt 314136496

                                                                             
Query: 425       gtcgactcggtgctggatgtcgtgaggaaggaggcggagagctgtgactgcctgcagggc 484
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314136495 gtcgactcggtgctggatgtcgtgaggaaggaggcggagagctgtgactgcctgcagggc 314136436

                                                                             
Query: 485       ttccagctgacccactcgctgggtggggggaccgggtctgggatgggcaccctgctcatc 544
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314136435 ttccagctgacccactcgctgggtggggggaccgggtctgggatgggcaccctgctcatc 314136376

                                                                             
Query: 545       agcaagatccgggaggagtaccccgaccgcatcatgaacaccttcagcgtggtgccctcg 604
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314136375 agcaagatccgggaggagtaccccgaccgcatcatgaacaccttcagcgtggtgccctcg 314136316

                                                                             
Query: 605       cccaaggtgtcggacacggtggtggagccctacaacgccaccctctccgtgcaccagctg 664
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314136315 cccaaggtgtcggacacggtggtggagccctacaacgccaccctctccgtgcaccagctg 314136256

                                                                             
Query: 665       gtggagaacacggatgagacctactgcatcgacaacgaggccctgtacgacatctgcttc 724
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314136255 gtggagaacacggatgagacctactgcatcgacaacgaggccctgtacgacatctgcttc 314136196

                                                                             
Query: 725       cgcaccctgaagctgaccacgcccacctacggggacctcaaccacctggtgtcggccacc 784
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314136195 cgcaccctgaagctgaccacgcccacctacggggacctcaaccacctggtgtcggccacc 314136136

                                                                             
Query: 785       atgagcggggtcaccacctgcctgcgcttccccggccagctcaacgccgatctgcgcaag 844
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314136135 atgagcggggtcaccacctgcctgcgcttccccggccagctcaacgccgatctgcgcaag 314136076

                                                                             
Query: 845       ctggctgtgaacatggtgcccttcccgcgcctgcacttcttcatgcctggcttcgcgccg 904
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314136075 ctggctgtgaacatggtgcccttcccgcgcctgcacttcttcatgcctggcttcgcgccg 314136016

                                                                             
Query: 905       ctgaccagccgcggcagccagcagtaccgcgcgctgacggtgcccgagctcacgcagcag 964
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314136015 ctgaccagccgcggcagccagcagtaccgcgcgctgacggtgcccgagctcacgcagcag 314135956

                                                                             
Query: 965       atgttcgacgccaagaacatgatggccgcctgcgacccgcgccacggccgctacctgacg 1024
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314135955 atgttcgacgccaagaacatgatggccgcctgcgacccgcgccacggccgctacctgacg 314135896

                                                                             
Query: 1025      gtggctgctgtgttcaggggccgcatgtccatgaaggaggtggacgagcagatgctcaac 1084
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314135895 gtggctgctgtgttcaggggccgcatgtccatgaaggaggtggacgagcagatgctcaac 314135836

                                                                             
Query: 1085      gtgcagaacaagaacagcagctacttcgtggagtggatccccaacaacgtcaagacggcc 1144
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314135835 gtgcagaacaagaacagcagctacttcgtggagtggatccccaacaacgtcaagacggcc 314135776

                                                                             
Query: 1145      gtgtgcgacatcccgccgcgcggcctcaagatgtcggccaccttcatcggcaacagcacg 1204
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314135775 gtgtgcgacatcccgccgcgcggcctcaagatgtcggccaccttcatcggcaacagcacg 314135716

                                                                             
Query: 1205      gccatccaggagctgttcaagcgcatctcggagcagttcacggccatgttccggcgcaag 1264
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314135715 gccatccaggagctgttcaagcgcatctcggagcagttcacggccatgttccggcgcaag 314135656

                                                                             
Query: 1265      gccttcctgcactggtacacgggcgagggcatggacgagatggagttcaccgaggccgag 1324
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314135655 gccttcctgcactggtacacgggcgagggcatggacgagatggagttcaccgaggccgag 314135596

                                                                      
Query: 1325      agcaacatgaacgacctggtgtccgagtaccagcagtaccaggacgccacggc 1377
                 |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314135595 agcaacatgaacgacctggtgtccgagtaccagcagtaccaggacgccacggc 314135543



 Score =  264 bits (133), Expect = 1e-67
 Identities = 143/145 (98%), Gaps = 1/145 (0%)
 Strand = Plus / Minus

                                                                             
Query: 1419      tggcctagggccgtgtggtacccgagggacctctt-attcactcccagcctgttctctga 1477
                 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 314135501 tggcctagggccgtgtggtacccgagggacctctttattcactcccagcctgttctctga 314135442

                                                                             
Query: 1478      tagctccctctcatcgtgtgtgtatctgttcttcttcctgtctcgacatcacatgctgta 1537
                 ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314135441 tagctccgtctcatcgtgtgtgtatctgttcttcttcctgtctcgacatcacatgctgta 314135382

                                          
Query: 1538      cagacaccaccattaaagccttttc 1562
                 |||||||||||||||||||||||||
Sbjct: 314135381 cagacaccaccattaaagccttttc 314135357



 Score =  226 bits (114), Expect = 3e-56
 Identities = 114/114 (100%)
 Strand = Plus / Minus

                                                                             
Query: 254       ggtggcaagtacgtgcctcgcgccgtgctcgtggaccttgagccgggcaccatggactcc 313
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314137152 ggtggcaagtacgtgcctcgcgccgtgctcgtggaccttgagccgggcaccatggactcc 314137093

                                                                       
Query: 314       gtgcgctcggggcccttcgggcagatcttcaggccggacaacttcgtcttcggt 367
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314137092 gtgcgctcggggcccttcgggcagatcttcaggccggacaacttcgtcttcggt 314137039



 Score =  226 bits (114), Expect = 3e-56
 Identities = 114/114 (100%)
 Strand = Plus / Minus

                                                                             
Query: 144       agttttgggaggtgatcagcgacgagcatggcatcgatcctaccggcacctaccacgggg 203
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314137338 agttttgggaggtgatcagcgacgagcatggcatcgatcctaccggcacctaccacgggg 314137279

                                                                       
Query: 204       acagcgacctgcagctggagcggatcaacgtgtactacaacgaggccaccggtg 257
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314137278 acagcgacctgcagctggagcggatcaacgtgtactacaacgaggccaccggtg 314137225



 Score =  127 bits (64), Expect = 2e-26
 Identities = 64/64 (100%)
 Strand = Plus / Minus

                                                                             
Query: 82        agcagccatgagggagatcgtgcacctgcaggccggccagtgcggcaaccagatcggcgc 141
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314137689 agcagccatgagggagatcgtgcacctgcaggccggccagtgcggcaaccagatcggcgc 314137630

                     
Query: 142       caag 145
                 ||||
Sbjct: 314137629 caag 314137626



 Score = 85.7 bits (43), Expect = 7e-14
 Identities = 43/43 (100%)
 Strand = Plus / Minus

                                                            
Query: 1         gcattctgcgcgcccgctcttcggcttttcttacaggccttct 43
                 |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314137770 gcattctgcgcgcccgctcttcggcttttcttacaggccttct 314137728


>Sscrofa_Chr07 
||          Length = 134764511

 Score = 1701 bits (858), Expect = 0.0
 Identities = 972/1010 (96%)
 Strand = Plus / Minus

                                                                           
Query: 368     cagagtggtgccgggaacaactgggccaaggggcactacacagaaggcgcagagcttgtc 427
               ||||| |||||||| ||||||||||||||||| ||||||||||| ||||| ||||| || 
Sbjct: 2014808 cagagcggtgccggcaacaactgggccaagggccactacacagagggcgccgagctggtg 2014749

                                                                           
Query: 428     gactcggtgctggatgtcgtgaggaaggaggcggagagctgtgactgcctgcagggcttc 487
               |||||||| ||||| || || ||||||||| | |||||||||||||| ||||||||||||
Sbjct: 2014748 gactcggtcctggacgtggtcaggaaggagtcagagagctgtgactgtctgcagggcttc 2014689

                                                                           
Query: 488     cagctgacccactcgctgggtggggggaccgggtctgggatgggcaccctgctcatcagc 547
               |||||||||||||||||||| || || || || || ||||||||||||||||||||||||
Sbjct: 2014688 cagctgacccactcgctggggggcggcacgggttcggggatgggcaccctgctcatcagc 2014629

                                                                           
Query: 548     aagatccgggaggagtaccccgaccgcatcatgaacaccttcagcgtggtgccctcgccc 607
               |||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||||
Sbjct: 2014628 aagatccgcgaggagtaccccgaccgcatcatgaacaccttcagcgtcatgccctcgccc 2014569

                                                                           
Query: 608     aaggtgtcggacacggtggtggagccctacaacgccaccctctccgtgcaccagctggtg 667
               ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 2014568 aaggtctcggacacggtggtcgagccctacaacgccaccctctccgtgcaccagctggtg 2014509

                                                                           
Query: 668     gagaacacggatgagacctactgcatcgacaacgaggccctgtacgacatctgcttccgc 727
               |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 2014508 gagaacacggatgagacctattgcatcgacaacgaggccctgtacgacatctgcttccgc 2014449

                                                                           
Query: 728     accctgaagctgaccacgcccacctacggggacctcaaccacctggtgtcggccaccatg 787
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2014448 accctgaagctgaccacgcccacctacggggacctcaaccacctggtgtcggccaccatg 2014389

                                                                           
Query: 788     agcggggtcaccacctgcctgcgcttccccggccagctcaacgccgatctgcgcaagctg 847
               |||||||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct: 2014388 agcggggtcaccacgtgcctgcgcttcccgggccagctcaacgccgacctgcgcaagctg 2014329

                                                                           
Query: 848     gctgtgaacatggtgcccttcccgcgcctgcacttcttcatgcctggcttcgcgccgctg 907
               || ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 2014328 gccgtgaacatggtgcccttcccgcgcctgcacttcttcatgcccggcttcgcgccgctg 2014269

                                                                           
Query: 908     accagccgcggcagccagcagtaccgcgcgctgacggtgcccgagctcacgcagcagatg 967
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2014268 accagccgcggcagccagcagtaccgcgcgctgacggtgcccgagctcacgcagcagatg 2014209

                                                                           
Query: 968     ttcgacgccaagaacatgatggccgcctgcgacccgcgccacggccgctacctgacggtg 1027
               |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2014208 ttcgactccaagaacatgatggccgcctgcgacccgcgccacggccgctacctgacggtg 2014149

                                                                           
Query: 1028    gctgctgtgttcaggggccgcatgtccatgaaggaggtggacgagcagatgctcaacgtg 1087
               || ||  | ||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2014148 gccgccatcttccgcggccgcatgtccatgaaggaggtggacgagcagatgctcaacgtg 2014089

                                                                           
Query: 1088    cagaacaagaacagcagctacttcgtggagtggatccccaacaacgtcaagacggccgtg 1147
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2014088 cagaacaagaacagcagctacttcgtggagtggatccccaacaacgtcaagacggccgtg 2014029

                                                                           
Query: 1148    tgcgacatcccgccgcgcggcctcaagatgtcggccaccttcatcggcaacagcacggcc 1207
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2014028 tgcgacatcccgccgcgcggcctcaagatgtcggccaccttcatcggcaacagcacggcc 2013969

                                                                           
Query: 1208    atccaggagctgttcaagcgcatctcggagcagttcacggccatgttccggcgcaaggcc 1267
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2013968 atccaggagctgttcaagcgcatctcggagcagttcacggccatgttccggcgcaaggcc 2013909

                                                                           
Query: 1268    ttcctgcactggtacacgggcgagggcatggacgagatggagttcaccgaggccgagagc 1327
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2013908 ttcctgcactggtacacgggcgagggcatggacgagatggagttcaccgaggccgagagc 2013849

                                                                 
Query: 1328    aacatgaacgacctggtgtccgagtaccagcagtaccaggacgccacggc 1377
               ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2013848 aacatgaacgacctggtgtccgagtaccagcagtaccaggacgccacggc 2013799



 Score = 1677 bits (846), Expect = 0.0
 Identities = 969/1010 (95%)
 Strand = Plus / Minus

                                                                           
Query: 368     cagagtggtgccgggaacaactgggccaaggggcactacacagaaggcgcagagcttgtc 427
               ||||| |||||||| ||||||||||||||||| |||||||| || ||||| ||||| || 
Sbjct: 1976326 cagagcggtgccggcaacaactgggccaagggccactacacggagggcgccgagctggtg 1976267

                                                                           
Query: 428     gactcggtgctggatgtcgtgaggaaggaggcggagagctgtgactgcctgcagggcttc 487
               |||||||| ||||| || || ||||||||| | |||||||||||||| ||||||||||||
Sbjct: 1976266 gactcggtcctggacgtggtcaggaaggagtcagagagctgtgactgtctgcagggcttc 1976207

                                                                           
Query: 488     cagctgacccactcgctgggtggggggaccgggtctgggatgggcaccctgctcatcagc 547
               |||||||||||||||||||| || || || || || |||||||||||||||||||| |||
Sbjct: 1976206 cagctgacccactcgctggggggcggcacgggctccgggatgggcaccctgctcattagc 1976147

                                                                           
Query: 548     aagatccgggaggagtaccccgaccgcatcatgaacaccttcagcgtggtgccctcgccc 607
               |||||||| ||||||||||||||||||||||||||||||||||||||  ||||||| |||
Sbjct: 1976146 aagatccgcgaggagtaccccgaccgcatcatgaacaccttcagcgtcatgccctcaccc 1976087

                                                                           
Query: 608     aaggtgtcggacacggtggtggagccctacaacgccaccctctccgtgcaccagctggtg 667
               ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 1976086 aaggtctcggacacggtggtcgagccctacaacgccaccctctccgtgcaccagctggtg 1976027

                                                                           
Query: 668     gagaacacggatgagacctactgcatcgacaacgaggccctgtacgacatctgcttccgc 727
               |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1976026 gagaacacggatgagacctactccatcgacaacgaggccctgtacgacatctgcttccgc 1975967

                                                                           
Query: 728     accctgaagctgaccacgcccacctacggggacctcaaccacctggtgtcggccaccatg 787
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1975966 accctgaagctgaccacgcccacctacggggacctcaaccacctggtgtcggccaccatg 1975907

                                                                           
Query: 788     agcggggtcaccacctgcctgcgcttccccggccagctcaacgccgatctgcgcaagctg 847
               |||||||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct: 1975906 agcggggtcaccacgtgcctgcgcttcccgggccagctcaacgccgacctgcgcaagctg 1975847

                                                                           
Query: 848     gctgtgaacatggtgcccttcccgcgcctgcacttcttcatgcctggcttcgcgccgctg 907
               || ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1975846 gccgtgaacatggtgcccttcccgcgcctgcacttcttcatgcccggcttcgcgccgctg 1975787

                                                                           
Query: 908     accagccgcggcagccagcagtaccgcgcgctgacggtgcccgagctcacgcagcagatg 967
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1975786 accagccgcggcagccagcagtaccgcgcgctgacggtgcccgagctcacgcagcagatg 1975727

                                                                           
Query: 968     ttcgacgccaagaacatgatggccgcctgcgacccgcgccacggccgctacctgacggtg 1027
               |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1975726 ttcgactccaagaacatgatggccgcctgcgacccgcgccacggccgctacctgacggtg 1975667

                                                                           
Query: 1028    gctgctgtgttcaggggccgcatgtccatgaaggaggtggacgagcagatgctcaacgtg 1087
               || ||  | ||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1975666 gccgccatcttccgcggccgcatgtccatgaaggaggtggacgagcagatgctcaacgtg 1975607

                                                                           
Query: 1088    cagaacaagaacagcagctacttcgtggagtggatccccaacaacgtcaagacggccgtg 1147
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1975606 cagaacaagaacagcagctacttcgtggagtggatccccaacaacgtcaagacggccgtg 1975547

                                                                           
Query: 1148    tgcgacatcccgccgcgcggcctcaagatgtcggccaccttcatcggcaacagcacggcc 1207
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1975546 tgcgacatcccgccgcgcggcctcaagatgtcggccaccttcatcggcaacagcacggcc 1975487

                                                                           
Query: 1208    atccaggagctgttcaagcgcatctcggagcagttcacggccatgttccggcgcaaggcc 1267
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1975486 atccaggagctgttcaagcgcatctcggagcagttcacggccatgttccggcgcaaggcc 1975427

                                                                           
Query: 1268    ttcctgcactggtacacgggcgagggcatggacgagatggagttcaccgaggccgagagc 1327
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1975426 ttcctgcactggtacacgggcgagggcatggacgagatggagttcaccgaggccgagagc 1975367

                                                                 
Query: 1328    aacatgaacgacctggtgtccgagtaccagcagtaccaggacgccacggc 1377
               ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1975366 aacatgaacgacctggtgtccgagtaccagcagtaccaggacgccacggc 1975317



 Score = 1047 bits (528), Expect = 0.0
 Identities = 876/992 (88%)
 Strand = Plus / Plus

                                                                            
Query: 383      aacaactgggccaaggggcactacacagaaggcgcagagcttgtcgactcggtgctggat 442
                ||||||||||||||||| ||||| |||||||| || ||||| || ||||| || ||||||
Sbjct: 26972216 aacaactgggccaagggccactatacagaaggggctgagctggttgactcagtcctggat 26972275

                                                                            
Query: 443      gtcgtgaggaaggaggcggagagctgtgactgcctgcagggcttccagctgacccactcg 502
                || ||  |||||||||| ||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 26972276 gtggttcggaaggaggctgagagctgtgactgccttcagggcttccagctgacccactcg 26972335

                                                                            
Query: 503      ctgggtggggggaccgggtctgggatgggcaccctgctcatcagcaagatccgggaggag 562
                ||||| || || || || ||||| ||||||||  ||||||||||||||||||| || || 
Sbjct: 26972336 ctgggcggtggcacaggctctggaatgggcactttgctcatcagcaagatccgtgaagaa 26972395

                                                                            
Query: 563      taccccgaccgcatcatgaacaccttcagcgtggtgccctcgcccaaggtgtcggacacg 622
                || ||||||||||||||||| |||||||| || |||||||| ||||| ||||| ||||| 
Sbjct: 26972396 tatcccgaccgcatcatgaataccttcagtgtcgtgccctcacccaaagtgtctgacacc 26972455

                                                                            
Query: 623      gtggtggagccctacaacgccaccctctccgtgcaccagctggtggagaacacggatgag 682
                ||||| ||||||||||||||||||||||| || || ||| ||||||||||||| ||||||
Sbjct: 26972456 gtggttgagccctacaacgccaccctctctgtccatcagttggtggagaacactgatgag 26972515

                                                                            
Query: 683      acctactgcatcgacaacgaggccctgtacgacatctgcttccgcaccctgaagctgacc 742
                ||||||||||||||||| |||||||| |||||||||||||||||||| || |||||||||
Sbjct: 26972516 acctactgcatcgacaatgaggccctttacgacatctgcttccgcactctcaagctgacc 26972575

                                                                            
Query: 743      acgcccacctacggggacctcaaccacctggtgtcggccaccatgagcggggtcaccacc 802
                ||||| ||||| |||||||| |||||||| || || ||||||||||| || |||||||||
Sbjct: 26972576 acgccaacctatggggacctgaaccaccttgtctctgccaccatgagtggtgtcaccacc 26972635

                                                                            
Query: 803      tgcctgcgcttccccggccagctcaacgccgatctgcgcaagctggctgtgaacatggtg 862
                ||||| |||||||| ||||||||||| || || || ||||||||||| || || ||||||
Sbjct: 26972636 tgcctccgcttccctggccagctcaatgctgacctccgcaagctggcagtcaatatggtg 26972695

                                                                            
Query: 863      cccttcccgcgcctgcacttcttcatgcctggcttcgcgccgctgaccagccgcggcagc 922
                |||||||| || || |||||||||||||| ||||| || || ||||||||||| || |||
Sbjct: 26972696 cccttcccacgtctccacttcttcatgcccggctttgcccctctgaccagccgtggaagc 26972755

                                                                            
Query: 923      cagcagtaccgcgcgctgacggtgcccgagctcacgcagcagatgttcgacgccaagaac 982
                ||||||||||| || || || ||||| |||||||| |||||| | ||||| |||||||||
Sbjct: 26972756 cagcagtaccgggccctcactgtgcctgagctcacccagcaggtcttcgatgccaagaac 26972815

                                                                            
Query: 983      atgatggccgcctgcgacccgcgccacggccgctacctgacggtggctgctgtgttcagg 1042
                |||||||| ||||| ||||| ||||| ||||| ||||| || ||||||||||| ||| | 
Sbjct: 26972816 atgatggctgcctgtgacccccgccatggccggtacctcactgtggctgctgtcttccgt 26972875

                                                                            
Query: 1043     ggccgcatgtccatgaaggaggtggacgagcagatgctcaacgtgcagaacaagaacagc 1102
                || ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||
Sbjct: 26972876 gggcgcatgtccatgaaggaggtggatgagcagatgctcaacgtgcagaacaagaatagc 26972935

                                                                            
Query: 1103     agctacttcgtggagtggatccccaacaacgtcaagacggccgtgtgcgacatcccgccg 1162
                ||||||||||| || |||||||||||||| ||||||||||| || ||||| ||||| || 
Sbjct: 26972936 agctacttcgtagaatggatccccaacaatgtcaagacggctgtctgcgatatccctccc 26972995

                                                                            
Query: 1163     cgcggcctcaagatgtcggccaccttcatcggcaacagcacggccatccaggagctgttc 1222
                || |||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||
Sbjct: 26972996 cgtggcctcaagatggcggtcaccttcatcggcaacagcacggccatccaggagctattc 26973055

                                                                            
Query: 1223     aagcgcatctcggagcagttcacggccatgttccggcgcaaggccttcctgcactggtac 1282
                ||||||||||| ||||||||||| ||||||||||| || ||||||||||| |||||||||
Sbjct: 26973056 aagcgcatctcagagcagttcactgccatgttccgccgaaaggccttcctccactggtac 26973115

                                                                            
Query: 1283     acgggcgagggcatggacgagatggagttcaccgaggccgagagcaacatgaacgacctg 1342
                || || |||||||||||||||||||||||||| ||||| |||||||||||||| ||||| 
Sbjct: 26973116 acaggtgagggcatggacgagatggagttcactgaggctgagagcaacatgaatgacctc 26973175

                                                
Query: 1343     gtgtccgagtaccagcagtaccaggacgccac 1374
                || || |||||||||||||||||||| |||||
Sbjct: 26973176 gtctctgagtaccagcagtaccaggatgccac 26973207



 Score =  119 bits (60), Expect = 5e-24
 Identities = 90/100 (90%)
 Strand = Plus / Minus

                                                                           
Query: 144     agttttgggaggtgatcagcgacgagcatggcatcgatcctaccggcacctaccacgggg 203
               ||||||||||||| ||||||||||||||||||||||| || || ||||  ||||| || |
Sbjct: 1987537 agttttgggaggtcatcagcgacgagcatggcatcgaccccactggcagttaccatggcg 1987478

                                                       
Query: 204     acagcgacctgcagctggagcggatcaacgtgtactacaa 243
               |||||||| ||||||||||| |||||||||||||||||||
Sbjct: 1987477 acagcgacttgcagctggagaggatcaacgtgtactacaa 1987438



 Score =  115 bits (58), Expect = 8e-23
 Identities = 100/114 (87%)
 Strand = Plus / Minus

                                                                           
Query: 144     agttttgggaggtgatcagcgacgagcatggcatcgatcctaccggcacctaccacgggg 203
               ||||||||||||| ||||||||||||||||||||||| || || ||||  ||||| || |
Sbjct: 2015626 agttttgggaggtcatcagcgacgagcatggcatcgaccccactggcagttaccatggcg 2015567

                                                                     
Query: 204     acagcgacctgcagctggagcggatcaacgtgtactacaacgaggccaccggtg 257
               |||| ||| ||||||||||| ||||||||||||||||||| || ||||| ||||
Sbjct: 2015566 acagtgacttgcagctggagaggatcaacgtgtactacaatgaagccactggtg 2015513



 Score =  107 bits (54), Expect = 2e-20
 Identities = 99/114 (86%)
 Strand = Plus / Plus

                                                                            
Query: 144      agttttgggaggtgatcagcgacgagcatggcatcgatcctaccggcacctaccacgggg 203
                |||| |||||||||||||| || || ||||||||||| || ||||||||||| || ||||
Sbjct: 26971435 agttctgggaggtgatcagtgatgaacatggcatcgaccccaccggcacctatcatgggg 26971494

                                                                      
Query: 204      acagcgacctgcagctggagcggatcaacgtgtactacaacgaggccaccggtg 257
                ||||||||||||||||||| || |||  |||||||||||| || ||||| ||||
Sbjct: 26971495 acagcgacctgcagctggaccgcatctccgtgtactacaatgaagccacaggtg 26971548



 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 48/51 (94%)
 Strand = Plus / Minus

                                                                  
Query: 95      gagatcgtgcacctgcaggccggccagtgcggcaaccagatcggcgccaag 145
               |||||||||||| | ||||| ||||||||||||||||||||||||||||||
Sbjct: 1978413 gagatcgtgcacatccaggcgggccagtgcggcaaccagatcggcgccaag 1978363



 Score = 75.8 bits (38), Expect = 7e-11
 Identities = 86/102 (84%)
 Strand = Plus / Minus

                                                                           
Query: 259     caagtacgtgcctcgcgccgtgctcgtggaccttgagccgggcaccatggactccgtgcg 318
               |||||| ||||| || ||| | || ||||| || |||||||||||||||||||| ||  |
Sbjct: 2015251 caagtatgtgccccgggccatcctggtggatctggagccgggcaccatggactcggtcag 2015192

                                                         
Query: 319     ctcggggcccttcgggcagatcttcaggccggacaacttcgt 360
                || || |||||||| |||||||||||||| |||||||||||
Sbjct: 2015191 gtctggacccttcggccagatcttcaggcccgacaacttcgt 2015150



 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 91/109 (83%)
 Strand = Plus / Minus

                                                                           
Query: 259     caagtacgtgcctcgcgccgtgctcgtggaccttgagccgggcaccatggactccgtgcg 318
               |||||| ||||| || ||| | || ||||| || |||||||||||||||||||| ||  |
Sbjct: 1987117 caagtatgtgccccgggccatcctggtggatctggagccgggcaccatggactcggtcag 1987058

                                                                
Query: 319     ctcggggcccttcgggcagatcttcaggccggacaacttcgtcttcggt 367
                || || |||||||| |||||||||||||| |||||||| || ||||||
Sbjct: 1987057 gtctggacccttcggccagatcttcaggcccgacaactttgtgttcggt 1987009



 Score = 69.9 bits (35), Expect = 4e-09
 Identities = 47/51 (92%)
 Strand = Plus / Minus

                                                                  
Query: 95      gagatcgtgcacctgcaggccggccagtgcggcaaccagatcggcgccaag 145
               |||||||||||| | ||||| |||||||||||||| |||||||||||||||
Sbjct: 2016469 gagatcgtgcacatccaggcgggccagtgcggcaatcagatcggcgccaag 2016419


>Sscrofa_Chr06 
||          Length = 157765593

 Score = 1469 bits (741), Expect = 0.0
 Identities = 945/1013 (93%)
 Strand = Plus / Plus

                                                                          
Query: 365    ggtcagagtggtgccgggaacaactgggccaaggggcactacacagaaggcgcagagctt 424
              ||||||||||| || || |||||||||||||| || |||||||| || ||||| ||||| 
Sbjct: 267331 ggtcagagtggggctggcaacaactgggccaaaggtcactacacggagggcgcggagctg 267390

                                                                          
Query: 425    gtcgactcggtgctggatgtcgtgaggaaggaggcggagagctgtgactgcctgcagggc 484
              || |||||||| ||||| || ||| ||||||||   ||||  || |||||||||||||||
Sbjct: 267391 gtggactcggtcctggacgtggtgcggaaggagtgtgagaattgcgactgcctgcagggc 267450

                                                                          
Query: 485    ttccagctgacccactcgctgggtggggggaccgggtctgggatgggcaccctgctcatc 544
              |||||||| |||||||| ||||| || || || || || |||||||||||||||||||||
Sbjct: 267451 ttccagctcacccactctctggggggcggcacgggctccgggatgggcaccctgctcatc 267510

                                                                          
Query: 545    agcaagatccgggaggagtaccccgaccgcatcatgaacaccttcagcgtggtgccctcg 604
              |||||| |||| ||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 267511 agcaaggtccgcgaggagtaccctgaccgcatcatgaacaccttcagcgtggtgccctcg 267570

                                                                          
Query: 605    cccaaggtgtcggacacggtggtggagccctacaacgccaccctctccgtgcaccagctg 664
              ||||||||||||||||||||||| ||||||||||||||||| || ||| | |||||||||
Sbjct: 267571 cccaaggtgtcggacacggtggtcgagccctacaacgccacgctgtccatccaccagctg 267630

                                                                          
Query: 665    gtggagaacacggatgagacctactgcatcgacaacgaggccctgtacgacatctgcttc 724
              |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267631 gtggagaacacggacgagacctactgcatcgacaacgaggccctgtacgacatctgcttc 267690

                                                                          
Query: 725    cgcaccctgaagctgaccacgcccacctacggggacctcaaccacctggtgtcggccacc 784
              |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267691 cgcaccctcaagctggccacgcccacctacggggacctcaaccacctggtgtcggccacc 267750

                                                                          
Query: 785    atgagcggggtcaccacctgcctgcgcttccccggccagctcaacgccgatctgcgcaag 844
              ||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||
Sbjct: 267751 atgagcggggtcaccacctccctgcgcttcccgggccagctcaacgccgacctgcgcaag 267810

                                                                          
Query: 845    ctggctgtgaacatggtgcccttcccgcgcctgcacttcttcatgcctggcttcgcgccg 904
              ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 267811 ctggccgtgaacatggtgcccttcccgcgcctgcacttcttcatgcccggcttcgcgccg 267870

                                                                          
Query: 905    ctgaccagccgcggcagccagcagtaccgcgcgctgacggtgcccgagctcacgcagcag 964
              || ||   ||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267871 ctcactgcccggggcagccagcagtaccgcgcgctgacggtgcccgagctcacgcagcag 267930

                                                                          
Query: 965    atgttcgacgccaagaacatgatggccgcctgcgacccgcgccacggccgctacctgacg 1024
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 267931 atgttcgacgccaagaacatgatggccgcctgcgacccgcgccacggccgctacctgacc 267990

                                                                          
Query: 1025   gtggctgctgtgttcaggggccgcatgtccatgaaggaggtggacgagcagatgctcaac 1084
              |||||  | || ||| | || |||||||||||||||||||||||||||||||||||   |
Sbjct: 267991 gtggccaccgtcttccgagggcgcatgtccatgaaggaggtggacgagcagatgctggcc 268050

                                                                          
Query: 1085   gtgcagaacaagaacagcagctacttcgtggagtggatccccaacaacgtcaagacggcc 1144
               | |||| |||||||||||||||||||||||||||||||||||||||||| |||  ||||
Sbjct: 268051 atccagagcaagaacagcagctacttcgtggagtggatccccaacaacgtgaaggtggcc 268110

                                                                          
Query: 1145   gtgtgcgacatcccgccgcgcggcctcaagatgtcggccaccttcatcggcaacagcacg 1204
              |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||
Sbjct: 268111 gtgtgcgacatcccgccgcgcggcctcaagatgtcctccaccttcatcggcaacagcacg 268170

                                                                          
Query: 1205   gccatccaggagctgttcaagcgcatctcggagcagttcacggccatgttccggcgcaag 1264
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268171 gccatccaggagctgttcaagcgcatctcggagcagttcacggccatgttccggcgcaag 268230

                                                                          
Query: 1265   gccttcctgcactggtacacgggcgagggcatggacgagatggagttcaccgaggccgag 1324
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268231 gccttcctgcactggtacacgggcgagggcatggacgagatggagttcaccgaggccgag 268290

                                                                   
Query: 1325   agcaacatgaacgacctggtgtccgagtaccagcagtaccaggacgccacggc 1377
              |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268291 agcaacatgaacgacctggtgtccgagtaccagcagtaccaggacgccacggc 268343



 Score = 1312 bits (662), Expect = 0.0
 Identities = 923/1010 (91%)
 Strand = Plus / Plus

                                                                            
Query: 368      cagagtggtgccgggaacaactgggccaaggggcactacacagaaggcgcagagcttgtc 427
                |||| |||||| || ||||||||||||||||| |||||||| || || || |||||  | 
Sbjct: 90812904 cagactggtgctggcaacaactgggccaagggccactacacggagggtgcggagctgatg 90812963

                                                                            
Query: 428      gactcggtgctggatgtcgtgaggaaggaggcggagagctgtgactgcctgcagggcttc 487
                ||||| || |||||||| ||| ||||||||   |||  ||| ||||||||||||||||||
Sbjct: 90812964 gactcagtcctggatgtggtgcggaaggagagcgagcactgcgactgcctgcagggcttc 90813023

                                                                            
Query: 488      cagctgacccactcgctgggtggggggaccgggtctgggatgggcaccctgctcatcagc 547
                ||||| |||||||||||||| || || || || || |||||||||||| |||||||||||
Sbjct: 90813024 cagctcacccactcgctgggcggtggcacaggctccgggatgggcaccttgctcatcagc 90813083

                                                                            
Query: 548      aagatccgggaggagtaccccgaccgcatcatgaacaccttcagcgtggtgccctcgccc 607
                |||||||| ||||||| ||| || |||||||||||||||||||||||  ||||||| |||
Sbjct: 90813084 aagatccgagaggagttccctgatcgcatcatgaacaccttcagcgtcatgccctcaccc 90813143

                                                                            
Query: 608      aaggtgtcggacacggtggtggagccctacaacgccaccctctccgtgcaccagctggtg 667
                |||||||| ||||||||||| ||||||||||||||||| || ||||||||||||||||||
Sbjct: 90813144 aaggtgtcagacacggtggtcgagccctacaacgccacgctgtccgtgcaccagctggtg 90813203

                                                                            
Query: 668      gagaacacggatgagacctactgcatcgacaacgaggccctgtacgacatctgcttccgc 727
                |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 90813204 gagaacacggatgagacctactgcatcgacaacgaggccctgtatgacatctgcttccgc 90813263

                                                                            
Query: 728      accctgaagctgaccacgcccacctacggggacctcaaccacctggtgtcggccaccatg 787
                |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 90813264 accctgaagctgaccacgcctacctacggggacctcaaccacctggtgtcggccaccatg 90813323

                                                                            
Query: 788      agcggggtcaccacctgcctgcgcttccccggccagctcaacgccgatctgcgcaagctg 847
                || ||||||||||||| ||||||||| || |||||||||||||| || ||||||||||||
Sbjct: 90813324 agtggggtcaccacctccctgcgctttccaggccagctcaacgctgacctgcgcaagctg 90813383

                                                                            
Query: 848      gctgtgaacatggtgcccttcccgcgcctgcacttcttcatgcctggcttcgcgccgctg 907
                |||||||||||||| |||||||| |||||||||||||||||||| |||||||||||||| 
Sbjct: 90813384 gctgtgaacatggtccccttcccacgcctgcacttcttcatgcccggcttcgcgccgcta 90813443

                                                                            
Query: 908      accagccgcggcagccagcagtaccgcgcgctgacggtgcccgagctcacgcagcagatg 967
                |||  ||| |||||||||||||||||||| ||||| ||||| |||||||| |||||||||
Sbjct: 90813444 accgcccggggcagccagcagtaccgcgccctgacagtgccagagctcacccagcagatg 90813503

                                                                            
Query: 968      ttcgacgccaagaacatgatggccgcctgcgacccgcgccacggccgctacctgacggtg 1027
                ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| |||
Sbjct: 90813504 ttcgatgccaagaacatgatggccgcctgcgaccctcgccacggccgctacctgaccgtg 90813563

                                                                            
Query: 1028     gctgctgtgttcaggggccgcatgtccatgaaggaggtggacgagcagatgctcaacgtg 1087
                ||  |||| |||||||||| |||||||||||||||||||||||||||||||||   | | 
Sbjct: 90813564 gccactgtcttcaggggccccatgtccatgaaggaggtggacgagcagatgctggccatc 90813623

                                                                            
Query: 1088     cagaacaagaacagcagctacttcgtggagtggatccccaacaacgtcaagacggccgtg 1147
                |||||||||||||||||||||||||||||||||||||||||||| || |||  |||||||
Sbjct: 90813624 cagaacaagaacagcagctacttcgtggagtggatccccaacaatgtgaaggtggccgtg 90813683

                                                                            
Query: 1148     tgcgacatcccgccgcgcggcctcaagatgtcggccaccttcatcggcaacagcacggcc 1207
                ||||||||||||||  | ||||| |||||| | ||||||||||||||||||||||| |||
Sbjct: 90813684 tgcgacatcccgccatgtggcctgaagatggctgccaccttcatcggcaacagcacagcc 90813743

                                                                            
Query: 1208     atccaggagctgttcaagcgcatctcggagcagttcacggccatgttccggcgcaaggcc 1267
                |||||||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||
Sbjct: 90813744 atccaggagctgttcaagcgcatctcagagcagttctcggccatgtttcggcgcaaggcc 90813803

                                                                            
Query: 1268     ttcctgcactggtacacgggcgagggcatggacgagatggagttcaccgaggccgagagc 1327
                ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 90813804 ttcctgcactggttcacgggcgagggcatggacgagatggagttcaccgaggctgagagc 90813863

                                                                  
Query: 1328     aacatgaacgacctggtgtccgagtaccagcagtaccaggacgccacggc 1377
                ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90813864 aacatgaacgacctggtgtccgagtaccagcagtaccaggacgccacggc 90813913



 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 55/58 (94%)
 Strand = Plus / Plus

                                                                        
Query: 88     catgagggagatcgtgcacctgcaggccggccagtgcggcaaccagatcggcgccaag 145
              ||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||||
Sbjct: 259477 catgagggagatcgtgcacatccaggccggccagtgcggcaaccagatcggggccaag 259534



 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 72/84 (85%)
 Strand = Plus / Plus

                                                                            
Query: 284      gtggaccttgagccgggcaccatggactccgtgcgctcggggcccttcgggcagatcttc 343
                |||||| | ||||||||||||||||||   ||||| || ||||| || |||||| |||||
Sbjct: 90810077 gtggacttggagccgggcaccatggacagtgtgcggtccgggccttttgggcagctcttc 90810136

                                        
Query: 344      aggccggacaacttcgtcttcggt 367
                 |||||||||||||| ||||||||
Sbjct: 90810137 cggccggacaacttcatcttcggt 90810160



 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 39/42 (92%)
 Strand = Plus / Plus

                                                        
Query: 209    gacctgcagctggagcggatcaacgtgtactacaacgaggcc 250
              ||||||||||||||||| |||| ||| |||||||||||||||
Sbjct: 265941 gacctgcagctggagcgcatcagcgtctactacaacgaggcc 265982


>Sscrofa_Chr02 
||          Length = 162569375

 Score = 1431 bits (722), Expect = 0.0
 Identities = 929/998 (93%)
 Strand = Plus / Minus

                                                                            
Query: 377      gccgggaacaactgggccaaggggcactacacagaaggcgcagagcttgtcgactcggtg 436
                ||||| ||||||||||||||||| ||||||||||| ||||| ||||| || ||| |||| 
Sbjct: 72987002 gccggcaacaactgggccaagggccactacacagagggcgccgagctggtggacgcggtt 72986943

                                                                            
Query: 437      ctggatgtcgtgaggaaggaggcggagagctgtgactgcctgcagggcttccagctgacc 496
                ||||| || ||  |||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 72986942 ctggacgtggtccggaaggaggcggagagctgtgactgcctgcagggcttccaactgacc 72986883

                                                                            
Query: 497      cactcgctgggtggggggaccgggtctgggatgggcaccctgctcatcagcaagatccgg 556
                ||||||||||| || || || ||||| || ||||| ||||||||||||||||||||||| 
Sbjct: 72986882 cactcgctgggcggtggcacggggtccggcatggggaccctgctcatcagcaagatccgc 72986823

                                                                            
Query: 557      gaggagtaccccgaccgcatcatgaacaccttcagcgtggtgccctcgcccaaggtgtcg 616
                ||||||| ||| ||||| ||||||||||||||||||||||| ||||| ||||||||||| 
Sbjct: 72986822 gaggagttcccggaccggatcatgaacaccttcagcgtggtaccctcccccaaggtgtct 72986763

                                                                            
Query: 617      gacacggtggtggagccctacaacgccaccctctccgtgcaccagctggtggagaacacg 676
                ||||||||||||||||||||||||||||| || || || |||||||||||||||||||||
Sbjct: 72986762 gacacggtggtggagccctacaacgccacgctgtcggttcaccagctggtggagaacacg 72986703

                                                                            
Query: 677      gatgagacctactgcatcgacaacgaggccctgtacgacatctgcttccgcaccctgaag 736
                ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct: 72986702 gatgagacctactgcatcgacaacgaggcgctctacgacatctgcttccgcaccctgaag 72986643

                                                                            
Query: 737      ctgaccacgcccacctacggggacctcaaccacctggtgtcggccaccatgagcggggtc 796
                |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 72986642 ctgaccacccccacctacggcgacctcaaccacctggtgtcggccaccatgagcggggtc 72986583

                                                                            
Query: 797      accacctgcctgcgcttccccggccagctcaacgccgatctgcgcaagctggctgtgaac 856
                ||||| |||||||||||||| ||||||||||||||||| |||||||||||||| ||||||
Sbjct: 72986582 accacgtgcctgcgcttcccgggccagctcaacgccgacctgcgcaagctggccgtgaac 72986523

                                                                            
Query: 857      atggtgcccttcccgcgcctgcacttcttcatgcctggcttcgcgccgctgaccagccgc 916
                |||||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||| 
Sbjct: 72986522 atggtgcccttcccccgcctgcacttcttcatgccgggctttgcgccgctgaccagccgg 72986463

                                                                            
Query: 917      ggcagccagcagtaccgcgcgctgacggtgcccgagctcacgcagcagatgttcgacgcc 976
                ||||||||||||||||| || |||||||||||||| ||||| ||||||||||||||||||
Sbjct: 72986462 ggcagccagcagtaccgggcactgacggtgcccgaactcacccagcagatgttcgacgcc 72986403

                                                                            
Query: 977      aagaacatgatggccgcctgcgacccgcgccacggccgctacctgacggtggctgctgtg 1036
                |||||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||||
Sbjct: 72986402 aagaacatgatggccgcctgcgacccccgccacggccgctacctgaccgtggccgctgtg 72986343

                                                                            
Query: 1037     ttcaggggccgcatgtccatgaaggaggtggacgagcagatgctcaacgtgcagaacaag 1096
                ||| |||||||||||||||||||||||||||| ||||||||||| | ||| |||| ||||
Sbjct: 72986342 ttccggggccgcatgtccatgaaggaggtggatgagcagatgctgagcgtccagagcaag 72986283

                                                                            
Query: 1097     aacagcagctacttcgtggagtggatccccaacaacgtcaagacggccgtgtgcgacatc 1156
                |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 72986282 aacagcagctacttcgtggagtggattcccaacaacgtcaagacggccgtgtgcgacatc 72986223

                                                                            
Query: 1157     ccgccgcgcggcctcaagatgtcggccaccttcatcggcaacagcacggccatccaggag 1216
                ||||| || ||||| |||||| | ||||| ||||||||||||||||||||||||||||||
Sbjct: 72986222 ccgccccgtggcctgaagatggccgccactttcatcggcaacagcacggccatccaggag 72986163

                                                                            
Query: 1217     ctgttcaagcgcatctcggagcagttcacggccatgttccggcgcaaggccttcctgcac 1276
                ||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 72986162 ctgttcaagcgcatctccgaacagttcacggccatgttccggcgcaaggccttcctgcac 72986103

                                                                            
Query: 1277     tggtacacgggcgagggcatggacgagatggagttcaccgaggccgagagcaacatgaac 1336
                ||||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||
Sbjct: 72986102 tggtacacgggcgagggcatggatgagatggagttcactgaggcagagagcaacatgaac 72986043

                                                      
Query: 1337     gacctggtgtccgagtaccagcagtaccaggacgccac 1374
                |||||||||||||||||||||||||||||||| |||||
Sbjct: 72986042 gacctggtgtccgagtaccagcagtaccaggatgccac 72986005



 Score = 1431 bits (722), Expect = 0.0
 Identities = 929/998 (93%)
 Strand = Plus / Minus

                                                                            
Query: 377      gccgggaacaactgggccaaggggcactacacagaaggcgcagagcttgtcgactcggtg 436
                ||||| ||||||||||||||||| ||||||||||| ||||| ||||| || ||| |||| 
Sbjct: 73065519 gccggcaacaactgggccaagggccactacacagagggcgccgagctggtggacgcggtt 73065460

                                                                            
Query: 437      ctggatgtcgtgaggaaggaggcggagagctgtgactgcctgcagggcttccagctgacc 496
                ||||| || ||  |||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 73065459 ctggacgtggtccggaaggaggcggagagctgtgactgcctgcagggcttccaactgacc 73065400

                                                                            
Query: 497      cactcgctgggtggggggaccgggtctgggatgggcaccctgctcatcagcaagatccgg 556
                ||||||||||| || || || ||||| || ||||| ||||||||||||||||||||||| 
Sbjct: 73065399 cactcgctgggcggtggcacggggtccggcatggggaccctgctcatcagcaagatccgc 73065340

                                                                            
Query: 557      gaggagtaccccgaccgcatcatgaacaccttcagcgtggtgccctcgcccaaggtgtcg 616
                ||||||| ||| ||||| ||||||||||||||||||||||| ||||| ||||||||||| 
Sbjct: 73065339 gaggagttcccggaccggatcatgaacaccttcagcgtggtaccctcccccaaggtgtct 73065280

                                                                            
Query: 617      gacacggtggtggagccctacaacgccaccctctccgtgcaccagctggtggagaacacg 676
                ||||||||||||||||||||||||||||| || || || |||||||||||||||||||||
Sbjct: 73065279 gacacggtggtggagccctacaacgccacgctgtcggttcaccagctggtggagaacacg 73065220

                                                                            
Query: 677      gatgagacctactgcatcgacaacgaggccctgtacgacatctgcttccgcaccctgaag 736
                ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct: 73065219 gatgagacctactgcatcgacaacgaggcgctctacgacatctgcttccgcaccctgaag 73065160

                                                                            
Query: 737      ctgaccacgcccacctacggggacctcaaccacctggtgtcggccaccatgagcggggtc 796
                |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 73065159 ctgaccacccccacctacggcgacctcaaccacctggtgtcggccaccatgagcggggtc 73065100

                                                                            
Query: 797      accacctgcctgcgcttccccggccagctcaacgccgatctgcgcaagctggctgtgaac 856
                ||||| |||||||||||||| ||||||||||||||||| |||||||||||||| ||||||
Sbjct: 73065099 accacgtgcctgcgcttcccgggccagctcaacgccgacctgcgcaagctggccgtgaac 73065040

                                                                            
Query: 857      atggtgcccttcccgcgcctgcacttcttcatgcctggcttcgcgccgctgaccagccgc 916
                |||||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||| 
Sbjct: 73065039 atggtgcccttcccccgcctgcacttcttcatgccgggctttgcgccgctgaccagccgg 73064980

                                                                            
Query: 917      ggcagccagcagtaccgcgcgctgacggtgcccgagctcacgcagcagatgttcgacgcc 976
                ||||||||||||||||| || |||||||||||||| ||||| ||||||||||||||||||
Sbjct: 73064979 ggcagccagcagtaccgggcactgacggtgcccgaactcacccagcagatgttcgacgcc 73064920

                                                                            
Query: 977      aagaacatgatggccgcctgcgacccgcgccacggccgctacctgacggtggctgctgtg 1036
                |||||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||||
Sbjct: 73064919 aagaacatgatggccgcctgcgacccccgccacggccgctacctgaccgtggccgctgtg 73064860

                                                                            
Query: 1037     ttcaggggccgcatgtccatgaaggaggtggacgagcagatgctcaacgtgcagaacaag 1096
                ||| |||||||||||||||||||||||||||| ||||||||||| | ||| |||| ||||
Sbjct: 73064859 ttccggggccgcatgtccatgaaggaggtggatgagcagatgctgagcgtccagagcaag 73064800

                                                                            
Query: 1097     aacagcagctacttcgtggagtggatccccaacaacgtcaagacggccgtgtgcgacatc 1156
                |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 73064799 aacagcagctacttcgtggagtggattcccaacaacgtcaagacggccgtgtgcgacatc 73064740

                                                                            
Query: 1157     ccgccgcgcggcctcaagatgtcggccaccttcatcggcaacagcacggccatccaggag 1216
                ||||| || ||||| |||||| | ||||| ||||||||||||||||||||||||||||||
Sbjct: 73064739 ccgccccgtggcctgaagatggccgccactttcatcggcaacagcacggccatccaggag 73064680

                                                                            
Query: 1217     ctgttcaagcgcatctcggagcagttcacggccatgttccggcgcaaggccttcctgcac 1276
                ||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 73064679 ctgttcaagcgcatctccgaacagttcacggccatgttccggcgcaaggccttcctgcac 73064620

                                                                            
Query: 1277     tggtacacgggcgagggcatggacgagatggagttcaccgaggccgagagcaacatgaac 1336
                ||||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||
Sbjct: 73064619 tggtacacgggcgagggcatggatgagatggagttcactgaggcagagagcaacatgaac 73064560

                                                      
Query: 1337     gacctggtgtccgagtaccagcagtaccaggacgccac 1374
                |||||||||||||||||||||||||||||||| |||||
Sbjct: 73064559 gacctggtgtccgagtaccagcagtaccaggatgccac 73064522



 Score =  137 bits (69), Expect = 2e-29
 Identities = 99/109 (90%)
 Strand = Plus / Minus

                                                                            
Query: 144      agttttgggaggtgatcagcgacgagcatggcatcgatcctaccggcacctaccacgggg 203
                ||||||||||||||||||| || ||||||||||| ||||| || ||||| ||||||||||
Sbjct: 73084374 agttttgggaggtgatcagtgatgagcatggcattgatcccactggcacataccacgggg 73084315

                                                                 
Query: 204      acagcgacctgcagctggagcggatcaacgtgtactacaacgaggccac 252
                |||||||||||||| ||||| |||||||||| |||||||| ||||||||
Sbjct: 73084314 acagcgacctgcagttggagaggatcaacgtctactacaatgaggccac 73084266



 Score = 85.7 bits (43), Expect = 7e-14
 Identities = 49/51 (96%)
 Strand = Plus / Minus

                                                                   
Query: 95       gagatcgtgcacctgcaggccggccagtgcggcaaccagatcggcgccaag 145
                ||||||||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 73084965 gagatcgtgcacctgcaagccggccagtgcggcaaccagatcggagccaag 73084915



 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 58/65 (89%)
 Strand = Plus / Minus

                                                                            
Query: 278      gtgctcgtggaccttgagccgggcaccatggactccgtgcgctcggggcccttcgggcag 337
                ||||| |||||||| ||||||||||||||||||||||| ||||| || ||||| || |||
Sbjct: 73084142 gtgctggtggacctggagccgggcaccatggactccgtccgctcaggtccctttggccag 73084083

                     
Query: 338      atctt 342
                |||||
Sbjct: 73084082 atctt 73084078



 Score = 69.9 bits (35), Expect = 4e-09
 Identities = 47/51 (92%)
 Strand = Plus / Plus

                                                                   
Query: 1048     catgtccatgaaggaggtggacgagcagatgctcaacgtgcagaacaagaa 1098
                |||||||||||||||||||||| |||||||||| || || |||||||||||
Sbjct: 96325399 catgtccatgaaggaggtggacaagcagatgcttaatgtccagaacaagaa 96325449



 Score = 69.9 bits (35), Expect = 4e-09
 Identities = 47/51 (92%)
 Strand = Plus / Plus

                                                                   
Query: 1048     catgtccatgaaggaggtggacgagcagatgctcaacgtgcagaacaagaa 1098
                |||||||||||||||||||||| |||||||||| || || |||||||||||
Sbjct: 96491769 catgtccatgaaggaggtggacaagcagatgcttaatgtccagaacaagaa 96491819



 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 52/59 (88%)
 Strand = Plus / Plus

                                                                           
Query: 629      gagccctacaacgccaccctctccgtgcaccagctggtggagaacacggatgagaccta 687
                ||||||||||| ||||  ||||| |||||||||||||| || ||||| |||||||||||
Sbjct: 96324987 gagccctacaatgccatactctcagtgcaccagctggtagaaaacacagatgagaccta 96325045



 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 52/59 (88%)
 Strand = Plus / Plus

                                                                           
Query: 629      gagccctacaacgccaccctctccgtgcaccagctggtggagaacacggatgagaccta 687
                ||||||||||| ||||  ||||| |||||||||||||| || ||||| |||||||||||
Sbjct: 96491357 gagccctacaatgccatactctcagtgcaccagctggtagaaaacacagatgagaccta 96491415


>Sscrofa_Chr17 
||          Length = 69701581

 Score =  773 bits (390), Expect = 0.0
 Identities = 794/926 (85%), Gaps = 2/926 (0%)
 Strand = Plus / Plus

                                                                            
Query: 377      gccgggaacaactgggccaaggggcactacacagaaggcgcagagcttgtcgactcggtg 436
                ||||| ||||||||||||||||| |||||||| || || || ||||| || ||    |||
Sbjct: 66536036 gccggcaacaactgggccaagggccactacacggagggggccgagctggtggagggcgtg 66536095

                                                                            
Query: 437      ctggatgtcgtgaggaaggaggcggagagctgtgactgcctgcagggcttccagctgacc 496
                ||||| | |||| | |  ||||| ||| |||| ||||||||||||||||||||| ||   
Sbjct: 66536096 ctggacgccgtgcgcagcgaggccgagggctgcgactgcctgcagggcttccaggtggtg 66536155

                                                                            
Query: 497      cactcgctgggtggggggaccgggtctgggatgggcaccctgctcatcagcaagatccgg 556
                ||||||||||| || || || ||||| ||||||||||| ||||||||  |||||||||| 
Sbjct: 66536156 cactcgctgggcggcggcacggggtccgggatgggcacgctgctcatgggcaagatccgc 66536215

                                                                            
Query: 557      gaggagtaccccgaccgcatcatgaacaccttcagcgtggtgccctcgcccaaggtgtcg 616
                ||||||| ||| ||||||||| | ||| ||||||||||  |||||||| |||||||||||
Sbjct: 66536216 gaggagttcccggaccgcatcctcaactccttcagcgtcatgccctcggccaaggtgtcg 66536275

                                                                            
Query: 617      gacacggtggtggagccctacaacgccaccctctccgtgcaccagctggtggagaacacg 676
                |||||||||||||||||||||||||||   || ||| | ||||||||| || ||||| | 
Sbjct: 66536276 gacacggtggtggagccctacaacgccgtgctgtccatccaccagctgctgcagaacgcc 66536335

                                                                            
Query: 677      gatgagacctactgcatcgacaacgaggccctgtacgacatctgcttccgcaccctgaag 736
                || |    || |||||||||||||||||| || ||||||||||||| ||||||||||| |
Sbjct: 66536336 gacgcctgcttctgcatcgacaacgaggcgctctacgacatctgctgccgcaccctgagg 66536395

                                                                            
Query: 737      ctgaccacgcccacctacggggacctcaaccacctggtgtcggccaccatgagcggggtc 796
                |||||||||||||||||||| |||||||||||||||||||||   ||||||||||| |||
Sbjct: 66536396 ctgaccacgcccacctacggcgacctcaaccacctggtgtcgctgaccatgagcggcgtc 66536455

                                                                            
Query: 797      accacctgcctgcgcttccccggccagctcaacgccgatctgcgcaagctggctgtgaac 856
                ||||| |  ||||||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 66536456 accacgtcgctgcgcttccccggccagctcaacgccgacctgcgcaagctggccgtgaac 66536515

                                                                            
Query: 857      atggtgcccttcccgcgcctgcacttcttcatgcctggcttcgcgccgctgaccagccgc 916
                ||||||||||||||||||||||||||||||||||| |||||||||||||| |||  ||  
Sbjct: 66536516 atggtgcccttcccgcgcctgcacttcttcatgcccggcttcgcgccgctcaccgcccag 66536575

                                                                            
Query: 917      ggcagccagcagtaccgcgcgctgacggtgcccgagctcacgcagcagatgttcgacgcc 976
                |||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||
Sbjct: 66536576 ggcagccagcagtaccgcgcgctgaccgtggccgagctcacccagcagatgttcgacgcc 66536635

                                                                            
Query: 977      aagaacatgatggccgcctgcgacccgcgccacggccgctacctgacggtgg-ctgctgt 1035
                   ||||  ||| ||||||||||||| |||| ||||||||||||||| |||| ||||  |
Sbjct: 66536636 cgcaacaccatgaccgcctgcgacccccgccgcggccgctacctgaccgtggcctgc-at 66536694

                                                                            
Query: 1036     gttcaggggccgcatgtccatgaaggaggtggacgagcagatgctcaacgtgcagaacaa 1095
                 ||| |||| |  |||||||  ||||| |||||||||||| |||||| |||||||| || 
Sbjct: 66536695 cttccgggggcagatgtccaccaaggaagtggacgagcagctgctcaccgtgcagaccag 66536754

                                                                            
Query: 1096     gaacagcagctacttcgtggagtggatccccaacaacgtcaagacggccgtgtgcgacat 1155
                ||||||||||| ||||||||||||||||||||||||| |||||  |||||||||||||||
Sbjct: 66536755 gaacagcagctgcttcgtggagtggatccccaacaacctcaaggtggccgtgtgcgacat 66536814

                                                                            
Query: 1156     cccgccgcgcggcctcaagatgtcggccaccttcatcggcaacagcacggccatccagga 1215
                |||||| || || || |  ||| |||||||||||||||||||||||||||||||||||||
Sbjct: 66536815 cccgccccgggggctgagcatggcggccaccttcatcggcaacagcacggccatccagga 66536874

                                                                            
Query: 1216     gctgttcaagcgcatctcggagcagttcacggccatgttccggcgcaaggccttcctgca 1275
                |||||||    |  | || ||||| ||| |||||||||||  | | ||||||||| ||||
Sbjct: 66536875 gctgttcggcagggtgtctgagcacttctcggccatgttcaagaggaaggccttcgtgca 66536934

                                          
Query: 1276     ctggtacacgggcgagggcatggacg 1301
                |||||||||||||||||| |||||||
Sbjct: 66536935 ctggtacacgggcgaggggatggacg 66536960


>gb|GL895527.2| Sus scrofa unplaced genomic scaffold ChrUScaf3411
          Length = 22714

 Score =  206 bits (104), Expect = 3e-50
 Identities = 212/248 (85%)
 Strand = Plus / Minus

                                                                       
Query: 368 cagagtggtgccgggaacaactgggccaaggggcactacacagaaggcgcagagcttgtc 427
           |||| |||||| || ||||||||||||||||| |||||||| || || || |||||  | 
Sbjct: 481 cagactggtgctggcaacaactgggccaagggccactacacggagggtgcggagctgatg 422

                                                                       
Query: 428 gactcggtgctggatgtcgtgaggaaggaggcggagagctgtgactgcctgcagggcttc 487
           ||||| || |||||||| ||| ||||||||   |||  ||| ||||||||||||||||||
Sbjct: 421 gactcagtcctggatgtggtgcggaaggagagcgagcactgcgactgcctgcagggcttc 362

                                                                       
Query: 488 cagctgacccactcgctgggtggggggaccgggtctgggatgggcaccctgctcatcagc 547
           ||||| |||||||||||||| || || || || || |||||||||||| |||||||||||
Sbjct: 361 cagctcacccactcgctgggcggtggcacaggctccgggatgggcaccttgctcatcagc 302

                                                                       
Query: 548 aagatccgggaggagtaccccgaccgcatcatgaacaccttcagcgtggtgccctcgccc 607
           |||||||| ||||||| ||| || |||||||||||||||||||||||  ||||||| |||
Sbjct: 301 aagatccgagaggagttccctgatcgcatcatgaacaccttcagcgtcatgccctcaccc 242

                   
Query: 608 aaggtgtc 615
           ||||||||
Sbjct: 241 aaggtgtc 234



 Score =  190 bits (96), Expect = 2e-45
 Identities = 123/132 (93%)
 Strand = Plus / Minus

                                                                       
Query: 765 accacctggtgtcggccaccatgagcggggtcaccacctgcctgcgcttccccggccagc 824
           ||||||||||||||||||||||||| ||||||||||||| ||||||||| || |||||||
Sbjct: 132 accacctggtgtcggccaccatgagtggggtcaccacctccctgcgctttccaggccagc 73

                                                                       
Query: 825 tcaacgccgatctgcgcaagctggctgtgaacatggtgcccttcccgcgcctgcacttct 884
           ||||||| || |||||||||||||||||||||||||| |||||||| |||||||||||||
Sbjct: 72  tcaacgctgacctgcgcaagctggctgtgaacatggtccccttcccacgcctgcacttct 13

                       
Query: 885 tcatgcctggct 896
           ||||||| ||||
Sbjct: 12  tcatgcccggct 1



 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 72/84 (85%)
 Strand = Plus / Minus

                                                                        
Query: 284  gtggaccttgagccgggcaccatggactccgtgcgctcggggcccttcgggcagatcttc 343
            |||||| | ||||||||||||||||||   ||||| || ||||| || |||||| |||||
Sbjct: 3629 gtggacttggagccgggcaccatggacagtgtgcggtccgggccttttgggcagctcttc 3570

                                    
Query: 344  aggccggacaacttcgtcttcggt 367
             |||||||||||||| ||||||||
Sbjct: 3569 cggccggacaacttcatcttcggt 3546


  Database: Sscrofa_10.2.fasta
    Posted date:  Nov 16, 2011 10:34 AM
  Number of letters in database: 2,808,509,378
  Number of sequences in database:  4582
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 28,556,623
Number of extensions: 181
Number of successful extensions: 181
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 174
Number of HSP's successfully gapped: 37
Length of query: 1588
Length of database: 2,808,509,378
Length adjustment: 22
Effective length of query: 1566
Effective length of database: 2,808,408,574
Effective search space: 4397967826884
Effective search space used: 4397967826884
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)