Animal-Genome cDNA 20110601C-006969

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-006969
         (1340 letters)

Database: RefSeq49_BP.fasta 
           33,088 sequences; 17,681,374 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001039838.1| tubulin beta-6 chain [Bos taurus].                798   0.0  
Alignment   gi|NP_001070595.1| tubulin beta-3 chain [Bos taurus].                764   0.0  
Alignment   gi|NP_001029835.1| tubulin beta-2C chain [Bos taurus].               759   0.0  
Alignment   gi|NP_001003900.1| tubulin beta-2B chain [Bos taurus].               758   0.0  
Alignment   gi|XP_002697652.1| PREDICTED: tubulin, beta 2-like [Bos taurus].     758   0.0  
Alignment   gi|XP_002703003.1| PREDICTED: tubulin, beta 2 [Bos taurus].          758   0.0  
Alignment   gi|NP_001029869.1| tubulin beta-4 chain [Bos taurus].                758   0.0  
Alignment   gi|NP_001040014.1| tubulin beta-5 chain [Bos taurus].                754   0.0  
Alignment   gi|XP_002698826.1| PREDICTED: tubulin, beta 5-like [Bos taurus].     717   0.0  
Alignment   gi|XP_612678.3| PREDICTED: tubulin, beta 5-like [Bos taurus].        717   0.0  

>ref|NP_001039838.1| tubulin beta-6 chain [Bos taurus].
          Length = 446

 Score =  798 bits (2062), Expect = 0.0
 Identities = 393/426 (92%), Positives = 399/426 (93%)
 Frame = +3

Query: 63   MREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGGYVGDSALQLERINVYYNESSSQKYV 242
            MREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGGYVGDSALQLERINVYYNESSSQKYV
Sbjct: 1    MREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGGYVGDSALQLERINVYYNESSSQKYV 60

Query: 243  PRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELMDSVLDVV 422
            PRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61   PRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELVDSVLDVV 120

Query: 423  RKESEHCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEFPDRIMNTFSVMPSPKVSDTVV 602
            RKE EHCDCLQGFQ                   KIREE+PDRIMNTFSVMPSPKVSDTVV
Sbjct: 121  RKECEHCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVV 180

Query: 603  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSL 782
            EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSL
Sbjct: 181  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSL 240

Query: 783  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMM 962
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMM
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMM 300

Query: 963  AACDPRHGRYLTVATVFRGPMSMKEVDEQMLAIQNKNSSYFVEWIPNNVKVAVCDIPPCG 1142
            AACDPRHGRYLTVA VFRGPMSMKEVDEQMLAIQNKNSSYFVEWIPNNVKVAVCDIPP G
Sbjct: 301  AACDPRHGRYLTVAAVFRGPMSMKEVDEQMLAIQNKNSSYFVEWIPNNVKVAVCDIPPRG 360

Query: 1143 LKMAATFIGNSTAIXELFQRISEQFFGMFPRKAFLHWFTGEXMDEMEFTEAESNMNELVS 1322
            LKM+ATFIGNSTAI ELF+RISEQF  MF RKAFLHWFTGE MDEMEFTEAESNMN+LVS
Sbjct: 361  LKMSATFIGNSTAIQELFKRISEQFSAMFRRKAFLHWFTGEGMDEMEFTEAESNMNDLVS 420

Query: 1323 DYQQYQ 1340
            +YQQYQ
Sbjct: 421  EYQQYQ 426


>ref|NP_001070595.1| tubulin beta-3 chain [Bos taurus].
          Length = 450

 Score =  764 bits (1974), Expect = 0.0
 Identities = 374/426 (87%), Positives = 391/426 (91%)
 Frame = +3

Query: 63   MREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGGYVGDSALQLERINVYYNESSSQKYV 242
            MREIVHIQAGQCGNQIG KFWEVISDEHGIDP+G YVGDS LQLERI+VYYNE+SS KYV
Sbjct: 1    MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPSGNYVGDSDLQLERISVYYNEASSHKYV 60

Query: 243  PRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELMDSVLDVV 422
            PRA LVDLEPGTMDSVRSG FG LFRPDNFIFGQ+GAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61   PRAILVDLEPGTMDSVRSGAFGHLFRPDNFIFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120

Query: 423  RKESEHCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEFPDRIMNTFSVMPSPKVSDTVV 602
            RKE E+CDCLQGFQ                   K+REE+PDRIMNTFSV+PSPKVSDTVV
Sbjct: 121  RKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKVREEYPDRIMNTFSVVPSPKVSDTVV 180

Query: 603  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSL 782
            EPYNATLS+HQLVENTDETYCIDNEALYDICFRTLKL TPTYGDLNHLVSATMSGVTTSL
Sbjct: 181  EPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKLATPTYGDLNHLVSATMSGVTTSL 240

Query: 783  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMM 962
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMM
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMM 300

Query: 963  AACDPRHGRYLTVATVFRGPMSMKEVDEQMLAIQNKNSSYFVEWIPNNVKVAVCDIPPCG 1142
            AACDPRHGRYLTVATVFRG MSMKEVDEQMLAIQ+KNSSYFVEWIPNNVKVAVCDIPP G
Sbjct: 301  AACDPRHGRYLTVATVFRGRMSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVCDIPPRG 360

Query: 1143 LKMAATFIGNSTAIXELFQRISEQFFGMFPRKAFLHWFTGEXMDEMEFTEAESNMNELVS 1322
            LKM++TFIGNSTAI ELF+RISEQF  MF RKAFLHW+TGE MDEMEFTEAESNMN+LVS
Sbjct: 361  LKMSSTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 1323 DYQQYQ 1340
            +YQQYQ
Sbjct: 421  EYQQYQ 426


>ref|NP_001029835.1| tubulin beta-2C chain [Bos taurus].
          Length = 445

 Score =  759 bits (1960), Expect = 0.0
 Identities = 370/426 (86%), Positives = 387/426 (90%)
 Frame = +3

Query: 63   MREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGGYVGDSALQLERINVYYNESSSQKYV 242
            MREIVH+QAGQCGNQIG KFWEVISDEHGIDP G Y GDS LQLERINVYYNE++  KYV
Sbjct: 1    MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60

Query: 243  PRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELMDSVLDVV 422
            PRA LVDLEPGTMDSVRSGPFGQ+FRPDNF+FGQ+GAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61   PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120

Query: 423  RKESEHCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEFPDRIMNTFSVMPSPKVSDTVV 602
            RKE+E CDCLQGFQ                   KIREE+PDRIMNTFSV+PSPKVSDTVV
Sbjct: 121  RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV 180

Query: 603  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSL 782
            EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT L
Sbjct: 181  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240

Query: 783  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMM 962
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT+RGSQQYRALTVPELTQQMFDAKNMM
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 300

Query: 963  AACDPRHGRYLTVATVFRGPMSMKEVDEQMLAIQNKNSSYFVEWIPNNVKVAVCDIPPCG 1142
            AACDPRHGRYLTVA VFRG MSMKEVDEQML +QNKNSSYFVEWIPNNVK AVCDIPP G
Sbjct: 301  AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 360

Query: 1143 LKMAATFIGNSTAIXELFQRISEQFFGMFPRKAFLHWFTGEXMDEMEFTEAESNMNELVS 1322
            LKM+ATFIGNSTAI ELF+RISEQF  MF RKAFLHW+TGE MDEMEFTEAESNMN+LVS
Sbjct: 361  LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 1323 DYQQYQ 1340
            +YQQYQ
Sbjct: 421  EYQQYQ 426


>ref|NP_001003900.1| tubulin beta-2B chain [Bos taurus].
          Length = 445

 Score =  758 bits (1958), Expect = 0.0
 Identities = 370/426 (86%), Positives = 386/426 (90%)
 Frame = +3

Query: 63   MREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGGYVGDSALQLERINVYYNESSSQKYV 242
            MREIVHIQAGQCGNQIG KFWEVISDEHGIDP G Y GDS LQLERINVYYNE++  KYV
Sbjct: 1    MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEATGNKYV 60

Query: 243  PRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELMDSVLDVV 422
            PRA LVDLEPGTMDSVRSGPFGQ+FRPDNF+FGQ+GAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61   PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120

Query: 423  RKESEHCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEFPDRIMNTFSVMPSPKVSDTVV 602
            RKESE CDCLQGFQ                   KIREE+PDRIMNTFSVMPSPKVSDTVV
Sbjct: 121  RKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVV 180

Query: 603  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSL 782
            EPYNATLSVHQLVENTDETY IDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT L
Sbjct: 181  EPYNATLSVHQLVENTDETYSIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240

Query: 783  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMM 962
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT+RGSQQYRALTVPELTQQMFD+KNMM
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMM 300

Query: 963  AACDPRHGRYLTVATVFRGPMSMKEVDEQMLAIQNKNSSYFVEWIPNNVKVAVCDIPPCG 1142
            AACDPRHGRYLTVA +FRG MSMKEVDEQML +QNKNSSYFVEWIPNNVK AVCDIPP G
Sbjct: 301  AACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 360

Query: 1143 LKMAATFIGNSTAIXELFQRISEQFFGMFPRKAFLHWFTGEXMDEMEFTEAESNMNELVS 1322
            LKM+ATFIGNSTAI ELF+RISEQF  MF RKAFLHW+TGE MDEMEFTEAESNMN+LVS
Sbjct: 361  LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 1323 DYQQYQ 1340
            +YQQYQ
Sbjct: 421  EYQQYQ 426


>ref|XP_002697652.1| PREDICTED: tubulin, beta 2-like [Bos taurus].
          Length = 445

 Score =  758 bits (1958), Expect = 0.0
 Identities = 370/426 (86%), Positives = 386/426 (90%)
 Frame = +3

Query: 63   MREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGGYVGDSALQLERINVYYNESSSQKYV 242
            MREIVHIQAGQCGNQIG KFWEVISDEHGIDP G Y GDS LQLERINVYYNE++  KYV
Sbjct: 1    MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEAAGNKYV 60

Query: 243  PRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELMDSVLDVV 422
            PRA LVDLEPGTMDSVRSGPFGQ+FRPDNF+FGQ+GAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61   PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120

Query: 423  RKESEHCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEFPDRIMNTFSVMPSPKVSDTVV 602
            RKESE CDCLQGFQ                   KIREE+PDRIMNTFSVMPSPKVSDTVV
Sbjct: 121  RKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVV 180

Query: 603  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSL 782
            EPYNATLSVHQLVENTDETY IDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT L
Sbjct: 181  EPYNATLSVHQLVENTDETYSIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240

Query: 783  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMM 962
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT+RGSQQYRALTVPELTQQMFD+KNMM
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMM 300

Query: 963  AACDPRHGRYLTVATVFRGPMSMKEVDEQMLAIQNKNSSYFVEWIPNNVKVAVCDIPPCG 1142
            AACDPRHGRYLTVA +FRG MSMKEVDEQML +QNKNSSYFVEWIPNNVK AVCDIPP G
Sbjct: 301  AACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 360

Query: 1143 LKMAATFIGNSTAIXELFQRISEQFFGMFPRKAFLHWFTGEXMDEMEFTEAESNMNELVS 1322
            LKM+ATFIGNSTAI ELF+RISEQF  MF RKAFLHW+TGE MDEMEFTEAESNMN+LVS
Sbjct: 361  LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 1323 DYQQYQ 1340
            +YQQYQ
Sbjct: 421  EYQQYQ 426


>ref|XP_002703003.1| PREDICTED: tubulin, beta 2 [Bos taurus].
          Length = 445

 Score =  758 bits (1958), Expect = 0.0
 Identities = 370/426 (86%), Positives = 386/426 (90%)
 Frame = +3

Query: 63   MREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGGYVGDSALQLERINVYYNESSSQKYV 242
            MREIVHIQAGQCGNQIG KFWEVISDEHGIDP G Y GDS LQLERINVYYNE++  KYV
Sbjct: 1    MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEAAGNKYV 60

Query: 243  PRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELMDSVLDVV 422
            PRA LVDLEPGTMDSVRSGPFGQ+FRPDNF+FGQ+GAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61   PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120

Query: 423  RKESEHCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEFPDRIMNTFSVMPSPKVSDTVV 602
            RKESE CDCLQGFQ                   KIREE+PDRIMNTFSVMPSPKVSDTVV
Sbjct: 121  RKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVV 180

Query: 603  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSL 782
            EPYNATLSVHQLVENTDETY IDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT L
Sbjct: 181  EPYNATLSVHQLVENTDETYSIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240

Query: 783  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMM 962
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT+RGSQQYRALTVPELTQQMFD+KNMM
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMM 300

Query: 963  AACDPRHGRYLTVATVFRGPMSMKEVDEQMLAIQNKNSSYFVEWIPNNVKVAVCDIPPCG 1142
            AACDPRHGRYLTVA +FRG MSMKEVDEQML +QNKNSSYFVEWIPNNVK AVCDIPP G
Sbjct: 301  AACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 360

Query: 1143 LKMAATFIGNSTAIXELFQRISEQFFGMFPRKAFLHWFTGEXMDEMEFTEAESNMNELVS 1322
            LKM+ATFIGNSTAI ELF+RISEQF  MF RKAFLHW+TGE MDEMEFTEAESNMN+LVS
Sbjct: 361  LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 1323 DYQQYQ 1340
            +YQQYQ
Sbjct: 421  EYQQYQ 426


>ref|NP_001029869.1| tubulin beta-4 chain [Bos taurus].
          Length = 444

 Score =  758 bits (1956), Expect = 0.0
 Identities = 369/426 (86%), Positives = 387/426 (90%)
 Frame = +3

Query: 63   MREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGGYVGDSALQLERINVYYNESSSQKYV 242
            MREIVH+QAGQCGNQIG KFWEVISDEHGIDP G Y GDS LQLERINVYYNE++   YV
Sbjct: 1    MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGNYV 60

Query: 243  PRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELMDSVLDVV 422
            PRA LVDLEPGTMDSVRSGPFGQ+FRPDNF+FGQ+GAGNNWAKGHYTEGAEL+D+VLDVV
Sbjct: 61   PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDAVLDVV 120

Query: 423  RKESEHCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEFPDRIMNTFSVMPSPKVSDTVV 602
            RKE+E CDCLQGFQ                   KIREEFPDRIMNTFSV+PSPKVSDTVV
Sbjct: 121  RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTFSVVPSPKVSDTVV 180

Query: 603  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSL 782
            EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT L
Sbjct: 181  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240

Query: 783  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMM 962
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT+RGSQQYRALTVPELTQQMFDAKNMM
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 300

Query: 963  AACDPRHGRYLTVATVFRGPMSMKEVDEQMLAIQNKNSSYFVEWIPNNVKVAVCDIPPCG 1142
            AACDPRHGRYLTVA VFRG MSMKEVDEQML++Q+KNSSYFVEWIPNNVK AVCDIPP G
Sbjct: 301  AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLSVQSKNSSYFVEWIPNNVKTAVCDIPPRG 360

Query: 1143 LKMAATFIGNSTAIXELFQRISEQFFGMFPRKAFLHWFTGEXMDEMEFTEAESNMNELVS 1322
            LKMAATFIGNSTAI ELF+RISEQF  MF RKAFLHW+TGE MDEMEFTEAESNMN+LVS
Sbjct: 361  LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 1323 DYQQYQ 1340
            +YQQYQ
Sbjct: 421  EYQQYQ 426


>ref|NP_001040014.1| tubulin beta-5 chain [Bos taurus].
          Length = 444

 Score =  754 bits (1948), Expect = 0.0
 Identities = 368/426 (86%), Positives = 386/426 (90%)
 Frame = +3

Query: 63   MREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGGYVGDSALQLERINVYYNESSSQKYV 242
            MREIVHIQAGQCGNQIG KFWEVISDEHGIDP G Y GDS LQL+RI+VYYNE++  KYV
Sbjct: 1    MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYV 60

Query: 243  PRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELMDSVLDVV 422
            PRA LVDLEPGTMDSVRSGPFGQ+FRPDNF+FGQ+GAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61   PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120

Query: 423  RKESEHCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEFPDRIMNTFSVMPSPKVSDTVV 602
            RKE+E CDCLQGFQ                   KIREE+PDRIMNTFSV+PSPKVSDTVV
Sbjct: 121  RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV 180

Query: 603  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSL 782
            EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT L
Sbjct: 181  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240

Query: 783  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMM 962
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT+RGSQQYRALTVPELTQQ+FDAKNMM
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMM 300

Query: 963  AACDPRHGRYLTVATVFRGPMSMKEVDEQMLAIQNKNSSYFVEWIPNNVKVAVCDIPPCG 1142
            AACDPRHGRYLTVA VFRG MSMKEVDEQML +QNKNSSYFVEWIPNNVK AVCDIPP G
Sbjct: 301  AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 360

Query: 1143 LKMAATFIGNSTAIXELFQRISEQFFGMFPRKAFLHWFTGEXMDEMEFTEAESNMNELVS 1322
            LKMA TFIGNSTAI ELF+RISEQF  MF RKAFLHW+TGE MDEMEFTEAESNMN+LVS
Sbjct: 361  LKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 1323 DYQQYQ 1340
            +YQQYQ
Sbjct: 421  EYQQYQ 426


>ref|XP_002698826.1| PREDICTED: tubulin, beta 5-like [Bos taurus].
          Length = 444

 Score =  717 bits (1850), Expect = 0.0
 Identities = 352/426 (82%), Positives = 372/426 (87%)
 Frame = +3

Query: 63   MREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGGYVGDSALQLERINVYYNESSSQKYV 242
            MREIVHIQAGQCGNQIG KFWEVISDEHGID  G Y GDS LQL+RI+VYYNE++  KYV
Sbjct: 1    MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGTYHGDSDLQLDRISVYYNEATGGKYV 60

Query: 243  PRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELMDSVLDVV 422
            PRA LVDLEPGTMDSV SGPFGQ+FR DN +FGQ+GA NNWAKGHY EGAEL+DSVLDVV
Sbjct: 61   PRAILVDLEPGTMDSVHSGPFGQIFRSDNIVFGQSGADNNWAKGHYREGAELVDSVLDVV 120

Query: 423  RKESEHCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEFPDRIMNTFSVMPSPKVSDTVV 602
            RKE++ CDCLQGFQ                   KIREE+PD IMNTFSV+PSPKVSDTVV
Sbjct: 121  RKEAKSCDCLQGFQLTHSLGGGTDSGMGTLLISKIREEYPDHIMNTFSVVPSPKVSDTVV 180

Query: 603  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSL 782
            EPYNATLSVHQLVENTDETYCIDNEALY ICFRTLKLTTPTYGDLN LVSATMSGVTT L
Sbjct: 181  EPYNATLSVHQLVENTDETYCIDNEALYAICFRTLKLTTPTYGDLNQLVSATMSGVTTCL 240

Query: 783  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMM 962
            RFPGQLNADL KLAVNMVPFP LHFF+PGFAPLT+ GSQQY ALTVPELTQQ+FDAKNMM
Sbjct: 241  RFPGQLNADLHKLAVNMVPFPHLHFFVPGFAPLTSCGSQQYWALTVPELTQQVFDAKNMM 300

Query: 963  AACDPRHGRYLTVATVFRGPMSMKEVDEQMLAIQNKNSSYFVEWIPNNVKVAVCDIPPCG 1142
            AACDPRHGRYLTVA VFRG MSMKEVDEQML +QNKNSSYFVEWIPNNVK AVCDIPP G
Sbjct: 301  AACDPRHGRYLTVAAVFRGQMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 360

Query: 1143 LKMAATFIGNSTAIXELFQRISEQFFGMFPRKAFLHWFTGEXMDEMEFTEAESNMNELVS 1322
            LKMA TFIGNSTAI ELF+RISEQF  MF RKAFLHW+TGE MDE EFTEAESNMN+LVS
Sbjct: 361  LKMAVTFIGNSTAIQELFKRISEQFMAMFRRKAFLHWYTGEGMDETEFTEAESNMNDLVS 420

Query: 1323 DYQQYQ 1340
            +YQQYQ
Sbjct: 421  EYQQYQ 426


>ref|XP_612678.3| PREDICTED: tubulin, beta 5-like [Bos taurus].
          Length = 444

 Score =  717 bits (1850), Expect = 0.0
 Identities = 352/426 (82%), Positives = 372/426 (87%)
 Frame = +3

Query: 63   MREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGGYVGDSALQLERINVYYNESSSQKYV 242
            MREIVHIQAGQCGNQIG KFWEVISDEHGID  G Y GDS LQL+RI+VYYNE++  KYV
Sbjct: 1    MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGTYHGDSDLQLDRISVYYNEATGGKYV 60

Query: 243  PRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELMDSVLDVV 422
            PRA LVDLEPGTMDSV SGPFGQ+FR DN +FGQ+GA NNWAKGHY EGAEL+DSVLDVV
Sbjct: 61   PRAILVDLEPGTMDSVHSGPFGQIFRSDNIVFGQSGADNNWAKGHYREGAELVDSVLDVV 120

Query: 423  RKESEHCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEFPDRIMNTFSVMPSPKVSDTVV 602
            RKE++ CDCLQGFQ                   KIREE+PD IMNTFSV+PSPKVSDTVV
Sbjct: 121  RKEAKSCDCLQGFQLTHSLGGGTDSGMGTLLISKIREEYPDHIMNTFSVVPSPKVSDTVV 180

Query: 603  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSL 782
            EPYNATLSVHQLVENTDETYCIDNEALY ICFRTLKLTTPTYGDLN LVSATMSGVTT L
Sbjct: 181  EPYNATLSVHQLVENTDETYCIDNEALYAICFRTLKLTTPTYGDLNQLVSATMSGVTTCL 240

Query: 783  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMM 962
            RFPGQLNADL KLAVNMVPFP LHFF+PGFAPLT+ GSQQY ALTVPELTQQ+FDAKNMM
Sbjct: 241  RFPGQLNADLHKLAVNMVPFPHLHFFVPGFAPLTSCGSQQYWALTVPELTQQVFDAKNMM 300

Query: 963  AACDPRHGRYLTVATVFRGPMSMKEVDEQMLAIQNKNSSYFVEWIPNNVKVAVCDIPPCG 1142
            AACDPRHGRYLTVA VFRG MSMKEVDEQML +QNKNSSYFVEWIPNNVK AVCDIPP G
Sbjct: 301  AACDPRHGRYLTVAAVFRGQMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 360

Query: 1143 LKMAATFIGNSTAIXELFQRISEQFFGMFPRKAFLHWFTGEXMDEMEFTEAESNMNELVS 1322
            LKMA TFIGNSTAI ELF+RISEQF  MF RKAFLHW+TGE MDE EFTEAESNMN+LVS
Sbjct: 361  LKMAVTFIGNSTAIQELFKRISEQFMAMFRRKAFLHWYTGEGMDETEFTEAESNMNDLVS 420

Query: 1323 DYQQYQ 1340
            +YQQYQ
Sbjct: 421  EYQQYQ 426


  Database: RefSeq49_BP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 17,681,374
  Number of sequences in database:  33,088
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 52,708,920
Number of extensions: 1523812
Number of successful extensions: 6807
Number of sequences better than 1.0e-05: 37
Number of HSP's gapped: 6694
Number of HSP's successfully gapped: 37
Length of query: 446
Length of database: 17,681,374
Length adjustment: 105
Effective length of query: 341
Effective length of database: 14,207,134
Effective search space: 4844632694
Effective search space used: 4844632694
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-006969
         (1340 letters)

Database: RefSeq49_CP.fasta 
           33,336 sequences; 18,874,504 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_850030.1| PREDICTED: similar to tubulin, beta 6 isoform 2...   794   0.0  
Alignment   gi|XP_860433.1| PREDICTED: similar to tubulin, beta 6 isoform 3...   791   0.0  
Alignment   gi|XP_860467.1| PREDICTED: similar to tubulin, beta 6 isoform 4...   788   0.0  
Alignment   gi|XP_533934.2| PREDICTED: similar to tubulin, beta 4 [Canis fa...   765   0.0  
Alignment   gi|XP_536745.1| PREDICTED: similar to tubulin, beta 3 isoform 1...   764   0.0  
Alignment   gi|XP_856242.1| PREDICTED: similar to tubulin, beta isoform 4 [...   762   0.0  
Alignment   gi|XP_848443.1| PREDICTED: similar to tubulin, beta isoform 1 [...   762   0.0  
Alignment   gi|XP_848461.1| PREDICTED: similar to tubulin, beta, 2 isoform ...   759   0.0  
Alignment   gi|XP_859971.1| PREDICTED: similar to tubulin, beta 3 isoform 2...   758   0.0  
Alignment   gi|XP_860049.1| PREDICTED: similar to tubulin, beta 3 isoform 4...   758   0.0  

>ref|XP_850030.1| PREDICTED: similar to tubulin, beta 6 isoform 2 [Canis familiaris].
          Length = 446

 Score =  794 bits (2050), Expect = 0.0
 Identities = 391/426 (91%), Positives = 397/426 (93%)
 Frame = +3

Query: 63   MREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGGYVGDSALQLERINVYYNESSSQKYV 242
            MREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGGYVGDSALQLERINVYYNESS  KYV
Sbjct: 1    MREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGGYVGDSALQLERINVYYNESSCGKYV 60

Query: 243  PRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELMDSVLDVV 422
            PRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAEL+D+VLDVV
Sbjct: 61   PRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELVDAVLDVV 120

Query: 423  RKESEHCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEFPDRIMNTFSVMPSPKVSDTVV 602
            RKE EHCDCLQGFQ                   KIREE+PDRIMNTFSVMPSPKVSDTVV
Sbjct: 121  RKECEHCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVV 180

Query: 603  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSL 782
            EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSL
Sbjct: 181  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSL 240

Query: 783  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMM 962
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMM
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMM 300

Query: 963  AACDPRHGRYLTVATVFRGPMSMKEVDEQMLAIQNKNSSYFVEWIPNNVKVAVCDIPPCG 1142
            AACDPRHGRYLTVA VFRGPMSMKEVDEQMLAIQNKNSSYFVEWIPNNVKVAVCDIPP G
Sbjct: 301  AACDPRHGRYLTVAAVFRGPMSMKEVDEQMLAIQNKNSSYFVEWIPNNVKVAVCDIPPRG 360

Query: 1143 LKMAATFIGNSTAIXELFQRISEQFFGMFPRKAFLHWFTGEXMDEMEFTEAESNMNELVS 1322
            LKMAATFIGNSTAI ELF+RISEQF  MF RKAFLHWFTGE MDEMEFTEAESNMN+LVS
Sbjct: 361  LKMAATFIGNSTAIQELFKRISEQFSAMFRRKAFLHWFTGEGMDEMEFTEAESNMNDLVS 420

Query: 1323 DYQQYQ 1340
            +YQQYQ
Sbjct: 421  EYQQYQ 426


>ref|XP_860433.1| PREDICTED: similar to tubulin, beta 6 isoform 3 [Canis familiaris].
          Length = 453

 Score =  791 bits (2044), Expect = 0.0
 Identities = 393/433 (90%), Positives = 399/433 (92%), Gaps = 7/433 (1%)
 Frame = +3

Query: 63   MREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGGYVGDSALQLERINVYYNESS----- 227
            MREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGGYVGDSALQLERINVYYNESS     
Sbjct: 1    MREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGGYVGDSALQLERINVYYNESSCDSTG 60

Query: 228  --SQKYVPRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELM 401
              SQKYVPRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAEL+
Sbjct: 61   GTSQKYVPRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELV 120

Query: 402  DSVLDVVRKESEHCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEFPDRIMNTFSVMPSP 581
            D+VLDVVRKE EHCDCLQGFQ                   KIREE+PDRIMNTFSVMPSP
Sbjct: 121  DAVLDVVRKECEHCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSP 180

Query: 582  KVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATM 761
            KVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATM
Sbjct: 181  KVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATM 240

Query: 762  SGVTTSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQM 941
            SGVTTSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQM
Sbjct: 241  SGVTTSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQM 300

Query: 942  FDAKNMMAACDPRHGRYLTVATVFRGPMSMKEVDEQMLAIQNKNSSYFVEWIPNNVKVAV 1121
            FDAKNMMAACDPRHGRYLTVA VFRGPMSMKEVDEQMLAIQNKNSSYFVEWIPNNVKVAV
Sbjct: 301  FDAKNMMAACDPRHGRYLTVAAVFRGPMSMKEVDEQMLAIQNKNSSYFVEWIPNNVKVAV 360

Query: 1122 CDIPPCGLKMAATFIGNSTAIXELFQRISEQFFGMFPRKAFLHWFTGEXMDEMEFTEAES 1301
            CDIPP GLKMAATFIGNSTAI ELF+RISEQF  MF RKAFLHWFTGE MDEMEFTEAES
Sbjct: 361  CDIPPRGLKMAATFIGNSTAIQELFKRISEQFSAMFRRKAFLHWFTGEGMDEMEFTEAES 420

Query: 1302 NMNELVSDYQQYQ 1340
            NMN+LVS+YQQYQ
Sbjct: 421  NMNDLVSEYQQYQ 433


>ref|XP_860467.1| PREDICTED: similar to tubulin, beta 6 isoform 4 [Canis familiaris].
          Length = 452

 Score =  788 bits (2035), Expect = 0.0
 Identities = 391/432 (90%), Positives = 397/432 (91%), Gaps = 6/432 (1%)
 Frame = +3

Query: 63   MREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGGYVGDSALQLERINVYYNESSSQ--- 233
            MREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGGYVGDSALQLERINVYYNESS     
Sbjct: 1    MREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGGYVGDSALQLERINVYYNESSCDFQQ 60

Query: 234  ---KYVPRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELMD 404
               KYVPRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAEL+D
Sbjct: 61   ERGKYVPRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELVD 120

Query: 405  SVLDVVRKESEHCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEFPDRIMNTFSVMPSPK 584
            +VLDVVRKE EHCDCLQGFQ                   KIREE+PDRIMNTFSVMPSPK
Sbjct: 121  AVLDVVRKECEHCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPK 180

Query: 585  VSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMS 764
            VSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMS
Sbjct: 181  VSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMS 240

Query: 765  GVTTSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMF 944
            GVTTSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMF
Sbjct: 241  GVTTSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMF 300

Query: 945  DAKNMMAACDPRHGRYLTVATVFRGPMSMKEVDEQMLAIQNKNSSYFVEWIPNNVKVAVC 1124
            DAKNMMAACDPRHGRYLTVA VFRGPMSMKEVDEQMLAIQNKNSSYFVEWIPNNVKVAVC
Sbjct: 301  DAKNMMAACDPRHGRYLTVAAVFRGPMSMKEVDEQMLAIQNKNSSYFVEWIPNNVKVAVC 360

Query: 1125 DIPPCGLKMAATFIGNSTAIXELFQRISEQFFGMFPRKAFLHWFTGEXMDEMEFTEAESN 1304
            DIPP GLKMAATFIGNSTAI ELF+RISEQF  MF RKAFLHWFTGE MDEMEFTEAESN
Sbjct: 361  DIPPRGLKMAATFIGNSTAIQELFKRISEQFSAMFRRKAFLHWFTGEGMDEMEFTEAESN 420

Query: 1305 MNELVSDYQQYQ 1340
            MN+LVS+YQQYQ
Sbjct: 421  MNDLVSEYQQYQ 432


>ref|XP_533934.2| PREDICTED: similar to tubulin, beta 4 [Canis familiaris].
          Length = 576

 Score =  765 bits (1975), Expect = 0.0
 Identities = 377/442 (85%), Positives = 395/442 (89%), Gaps = 1/442 (0%)
 Frame = +3

Query: 18   APS-RGAVGAASVERAMREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGGYVGDSALQL 194
            APS R A  AA    AMREIVH+QAGQCGNQIG KFWEVISDEHGIDP G Y GDS LQL
Sbjct: 117  APSIRAAAAAAPSATAMREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL 176

Query: 195  ERINVYYNESSSQKYVPRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKG 374
            ERINVYYNE++   YVPRA LVDLEPGTMDSVRSGPFGQ+FRPDNF+FGQ+GAGNNWAKG
Sbjct: 177  ERINVYYNEATGGNYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKG 236

Query: 375  HYTEGAELMDSVLDVVRKESEHCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEFPDRIM 554
            HYTEGAEL+D+VLDVVRKE+E CDCLQGFQ                   KIREEFPDRIM
Sbjct: 237  HYTEGAELVDAVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIM 296

Query: 555  NTFSVMPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGD 734
            NTFSV+PSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGD
Sbjct: 297  NTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGD 356

Query: 735  LNHLVSATMSGVTTSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRAL 914
            LNHLVSATMSGVTT LRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT+RGSQQYRAL
Sbjct: 357  LNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRAL 416

Query: 915  TVPELTQQMFDAKNMMAACDPRHGRYLTVATVFRGPMSMKEVDEQMLAIQNKNSSYFVEW 1094
            TVPELTQQMFDAKNMMAACDPRHGRYLTVA VFRG MSMKEVDEQML++Q+KNSSYFVEW
Sbjct: 417  TVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLSVQSKNSSYFVEW 476

Query: 1095 IPNNVKVAVCDIPPCGLKMAATFIGNSTAIXELFQRISEQFFGMFPRKAFLHWFTGEXMD 1274
            IPNNVK AVCDIPP GLKMAATFIGNSTAI ELF+RISEQF  MF RKAFLHW+TGE MD
Sbjct: 477  IPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMD 536

Query: 1275 EMEFTEAESNMNELVSDYQQYQ 1340
            EMEFTEAESNMN+LVS+YQQYQ
Sbjct: 537  EMEFTEAESNMNDLVSEYQQYQ 558


>ref|XP_536745.1| PREDICTED: similar to tubulin, beta 3 isoform 1 [Canis familiaris].
          Length = 450

 Score =  764 bits (1974), Expect = 0.0
 Identities = 374/426 (87%), Positives = 391/426 (91%)
 Frame = +3

Query: 63   MREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGGYVGDSALQLERINVYYNESSSQKYV 242
            MREIVHIQAGQCGNQIG KFWEVISDEHGIDP+G YVGDS LQLERI+VYYNE+SS KYV
Sbjct: 1    MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPSGNYVGDSDLQLERISVYYNEASSHKYV 60

Query: 243  PRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELMDSVLDVV 422
            PRA LVDLEPGTMDSVRSG FG LFRPDNFIFGQ+GAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61   PRAILVDLEPGTMDSVRSGAFGHLFRPDNFIFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120

Query: 423  RKESEHCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEFPDRIMNTFSVMPSPKVSDTVV 602
            RKE E+CDCLQGFQ                   K+REE+PDRIMNTFSV+PSPKVSDTVV
Sbjct: 121  RKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKVREEYPDRIMNTFSVVPSPKVSDTVV 180

Query: 603  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSL 782
            EPYNATLS+HQLVENTDETYCIDNEALYDICFRTLKL TPTYGDLNHLVSATMSGVTTSL
Sbjct: 181  EPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKLATPTYGDLNHLVSATMSGVTTSL 240

Query: 783  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMM 962
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMM
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMM 300

Query: 963  AACDPRHGRYLTVATVFRGPMSMKEVDEQMLAIQNKNSSYFVEWIPNNVKVAVCDIPPCG 1142
            AACDPRHGRYLTVATVFRG MSMKEVDEQMLAIQ+KNSSYFVEWIPNNVKVAVCDIPP G
Sbjct: 301  AACDPRHGRYLTVATVFRGRMSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVCDIPPRG 360

Query: 1143 LKMAATFIGNSTAIXELFQRISEQFFGMFPRKAFLHWFTGEXMDEMEFTEAESNMNELVS 1322
            LKM++TFIGNSTAI ELF+RISEQF  MF RKAFLHW+TGE MDEMEFTEAESNMN+LVS
Sbjct: 361  LKMSSTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 1323 DYQQYQ 1340
            +YQQYQ
Sbjct: 421  EYQQYQ 426


>ref|XP_856242.1| PREDICTED: similar to tubulin, beta isoform 4 [Canis familiaris].
          Length = 445

 Score =  762 bits (1968), Expect = 0.0
 Identities = 371/426 (87%), Positives = 387/426 (90%)
 Frame = +3

Query: 63   MREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGGYVGDSALQLERINVYYNESSSQKYV 242
            MREIVHIQAGQCGNQIG KFWEVISDEHGIDP G Y GDS LQLERINVYYNE++  KYV
Sbjct: 1    MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEATGNKYV 60

Query: 243  PRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELMDSVLDVV 422
            PRA LVDLEPGTMDSVRSGPFGQ+FRPDNF+FGQ+GAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61   PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120

Query: 423  RKESEHCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEFPDRIMNTFSVMPSPKVSDTVV 602
            RKESE CDCLQGFQ                   KIREE+PDRIMNTFSVMPSPKVSDTVV
Sbjct: 121  RKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVV 180

Query: 603  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSL 782
            EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT L
Sbjct: 181  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240

Query: 783  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMM 962
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT+RGSQQYRALTVPELTQQMFD+KNMM
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMM 300

Query: 963  AACDPRHGRYLTVATVFRGPMSMKEVDEQMLAIQNKNSSYFVEWIPNNVKVAVCDIPPCG 1142
            AACDPRHGRYLTVA +FRG MSMKEVDEQML +QNKNSSYFVEWIPNNVK AVCDIPP G
Sbjct: 301  AACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 360

Query: 1143 LKMAATFIGNSTAIXELFQRISEQFFGMFPRKAFLHWFTGEXMDEMEFTEAESNMNELVS 1322
            LKM+ATFIGNSTAI ELF+RISEQF  MF RKAFLHW+TGE MDEMEFTEAESNMN+LVS
Sbjct: 361  LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 1323 DYQQYQ 1340
            +YQQYQ
Sbjct: 421  EYQQYQ 426


>ref|XP_848443.1| PREDICTED: similar to tubulin, beta isoform 1 [Canis familiaris].
          Length = 445

 Score =  762 bits (1968), Expect = 0.0
 Identities = 371/426 (87%), Positives = 387/426 (90%)
 Frame = +3

Query: 63   MREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGGYVGDSALQLERINVYYNESSSQKYV 242
            MREIVHIQAGQCGNQIG KFWEVISDEHGIDP G Y GDS LQLERINVYYNE++  KYV
Sbjct: 1    MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEATGNKYV 60

Query: 243  PRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELMDSVLDVV 422
            PRA LVDLEPGTMDSVRSGPFGQ+FRPDNF+FGQ+GAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61   PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120

Query: 423  RKESEHCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEFPDRIMNTFSVMPSPKVSDTVV 602
            RKESE CDCLQGFQ                   KIREE+PDRIMNTFSVMPSPKVSDTVV
Sbjct: 121  RKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVV 180

Query: 603  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSL 782
            EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT L
Sbjct: 181  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240

Query: 783  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMM 962
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT+RGSQQYRALTVPELTQQMFD+KNMM
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMM 300

Query: 963  AACDPRHGRYLTVATVFRGPMSMKEVDEQMLAIQNKNSSYFVEWIPNNVKVAVCDIPPCG 1142
            AACDPRHGRYLTVA +FRG MSMKEVDEQML +QNKNSSYFVEWIPNNVK AVCDIPP G
Sbjct: 301  AACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 360

Query: 1143 LKMAATFIGNSTAIXELFQRISEQFFGMFPRKAFLHWFTGEXMDEMEFTEAESNMNELVS 1322
            LKM+ATFIGNSTAI ELF+RISEQF  MF RKAFLHW+TGE MDEMEFTEAESNMN+LVS
Sbjct: 361  LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 1323 DYQQYQ 1340
            +YQQYQ
Sbjct: 421  EYQQYQ 426


>ref|XP_848461.1| PREDICTED: similar to tubulin, beta, 2 isoform 1 [Canis familiaris].
          Length = 445

 Score =  759 bits (1960), Expect = 0.0
 Identities = 370/426 (86%), Positives = 387/426 (90%)
 Frame = +3

Query: 63   MREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGGYVGDSALQLERINVYYNESSSQKYV 242
            MREIVH+QAGQCGNQIG KFWEVISDEHGIDP G Y GDS LQLERINVYYNE++  KYV
Sbjct: 1    MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60

Query: 243  PRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELMDSVLDVV 422
            PRA LVDLEPGTMDSVRSGPFGQ+FRPDNF+FGQ+GAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61   PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120

Query: 423  RKESEHCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEFPDRIMNTFSVMPSPKVSDTVV 602
            RKE+E CDCLQGFQ                   KIREE+PDRIMNTFSV+PSPKVSDTVV
Sbjct: 121  RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV 180

Query: 603  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSL 782
            EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT L
Sbjct: 181  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240

Query: 783  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMM 962
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT+RGSQQYRALTVPELTQQMFDAKNMM
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 300

Query: 963  AACDPRHGRYLTVATVFRGPMSMKEVDEQMLAIQNKNSSYFVEWIPNNVKVAVCDIPPCG 1142
            AACDPRHGRYLTVA VFRG MSMKEVDEQML +QNKNSSYFVEWIPNNVK AVCDIPP G
Sbjct: 301  AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 360

Query: 1143 LKMAATFIGNSTAIXELFQRISEQFFGMFPRKAFLHWFTGEXMDEMEFTEAESNMNELVS 1322
            LKM+ATFIGNSTAI ELF+RISEQF  MF RKAFLHW+TGE MDEMEFTEAESNMN+LVS
Sbjct: 361  LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 1323 DYQQYQ 1340
            +YQQYQ
Sbjct: 421  EYQQYQ 426


>ref|XP_859971.1| PREDICTED: similar to tubulin, beta 3 isoform 2 [Canis familiaris].
          Length = 453

 Score =  758 bits (1958), Expect = 0.0
 Identities = 373/429 (86%), Positives = 392/429 (91%), Gaps = 3/429 (0%)
 Frame = +3

Query: 63   MREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGGYVGDSALQLERINVYYNESSSQ--- 233
            MREIVHIQAGQCGNQIG KFWEVISDEHGIDP+G YVGDS LQLERI+VYYNE+SS+   
Sbjct: 1    MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPSGNYVGDSDLQLERISVYYNEASSRGGS 60

Query: 234  KYVPRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELMDSVL 413
            +YVPRA LVDLEPGTMDSVRSG FG LFRPDNFIFGQ+GAGNNWAKGHYTEGAEL+DSVL
Sbjct: 61   RYVPRAILVDLEPGTMDSVRSGAFGHLFRPDNFIFGQSGAGNNWAKGHYTEGAELVDSVL 120

Query: 414  DVVRKESEHCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEFPDRIMNTFSVMPSPKVSD 593
            DVVRKE E+CDCLQGFQ                   K+REE+PDRIMNTFSV+PSPKVSD
Sbjct: 121  DVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKVREEYPDRIMNTFSVVPSPKVSD 180

Query: 594  TVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVT 773
            TVVEPYNATLS+HQLVENTDETYCIDNEALYDICFRTLKL TPTYGDLNHLVSATMSGVT
Sbjct: 181  TVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKLATPTYGDLNHLVSATMSGVT 240

Query: 774  TSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAK 953
            TSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAK
Sbjct: 241  TSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAK 300

Query: 954  NMMAACDPRHGRYLTVATVFRGPMSMKEVDEQMLAIQNKNSSYFVEWIPNNVKVAVCDIP 1133
            NMMAACDPRHGRYLTVATVFRG MSMKEVDEQMLAIQ+KNSSYFVEWIPNNVKVAVCDIP
Sbjct: 301  NMMAACDPRHGRYLTVATVFRGRMSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVCDIP 360

Query: 1134 PCGLKMAATFIGNSTAIXELFQRISEQFFGMFPRKAFLHWFTGEXMDEMEFTEAESNMNE 1313
            P GLKM++TFIGNSTAI ELF+RISEQF  MF RKAFLHW+TGE MDEMEFTEAESNMN+
Sbjct: 361  PRGLKMSSTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND 420

Query: 1314 LVSDYQQYQ 1340
            LVS+YQQYQ
Sbjct: 421  LVSEYQQYQ 429


>ref|XP_860049.1| PREDICTED: similar to tubulin, beta 3 isoform 4 [Canis familiaris].
          Length = 456

 Score =  758 bits (1957), Expect = 0.0
 Identities = 374/432 (86%), Positives = 391/432 (90%), Gaps = 6/432 (1%)
 Frame = +3

Query: 63   MREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGGYVGDSALQLERINVYYNESSS---- 230
            MREIVHIQAGQCGNQIG KFWEVISDEHGIDP+G YVGDS LQLERI+VYYNE+SS    
Sbjct: 1    MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPSGNYVGDSDLQLERISVYYNEASSISIK 60

Query: 231  --QKYVPRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELMD 404
               KYVPRA LVDLEPGTMDSVRSG FG LFRPDNFIFGQ+GAGNNWAKGHYTEGAEL+D
Sbjct: 61   QSHKYVPRAILVDLEPGTMDSVRSGAFGHLFRPDNFIFGQSGAGNNWAKGHYTEGAELVD 120

Query: 405  SVLDVVRKESEHCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEFPDRIMNTFSVMPSPK 584
            SVLDVVRKE E+CDCLQGFQ                   K+REE+PDRIMNTFSV+PSPK
Sbjct: 121  SVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKVREEYPDRIMNTFSVVPSPK 180

Query: 585  VSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMS 764
            VSDTVVEPYNATLS+HQLVENTDETYCIDNEALYDICFRTLKL TPTYGDLNHLVSATMS
Sbjct: 181  VSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKLATPTYGDLNHLVSATMS 240

Query: 765  GVTTSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMF 944
            GVTTSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMF
Sbjct: 241  GVTTSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMF 300

Query: 945  DAKNMMAACDPRHGRYLTVATVFRGPMSMKEVDEQMLAIQNKNSSYFVEWIPNNVKVAVC 1124
            DAKNMMAACDPRHGRYLTVATVFRG MSMKEVDEQMLAIQ+KNSSYFVEWIPNNVKVAVC
Sbjct: 301  DAKNMMAACDPRHGRYLTVATVFRGRMSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVC 360

Query: 1125 DIPPCGLKMAATFIGNSTAIXELFQRISEQFFGMFPRKAFLHWFTGEXMDEMEFTEAESN 1304
            DIPP GLKM++TFIGNSTAI ELF+RISEQF  MF RKAFLHW+TGE MDEMEFTEAESN
Sbjct: 361  DIPPRGLKMSSTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESN 420

Query: 1305 MNELVSDYQQYQ 1340
            MN+LVS+YQQYQ
Sbjct: 421  MNDLVSEYQQYQ 432


  Database: RefSeq49_CP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,874,504
  Number of sequences in database:  33,336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 54,894,467
Number of extensions: 1564428
Number of successful extensions: 7003
Number of sequences better than 1.0e-05: 109
Number of HSP's gapped: 6805
Number of HSP's successfully gapped: 122
Length of query: 446
Length of database: 18,874,504
Length adjustment: 106
Effective length of query: 340
Effective length of database: 15,340,888
Effective search space: 5215901920
Effective search space used: 5215901920
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-006969
         (1340 letters)

Database: RefSeq49_HP.fasta 
           32,964 sequences; 18,297,164 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_115914.1| tubulin beta-6 chain [Homo sapiens].                 796   0.0  
Alignment   gi|NP_006077.2| tubulin beta-3 chain isoform 1 [Homo sapiens].       764   0.0  
Alignment   gi|NP_821080.1| tubulin beta-2B chain [Homo sapiens].                762   0.0  
Alignment   gi|NP_006079.1| tubulin beta-2C chain [Homo sapiens].                759   0.0  
Alignment   gi|NP_001060.1| tubulin beta-2A chain [Homo sapiens].                758   0.0  
Alignment   gi|NP_006078.2| tubulin beta-4 chain [Homo sapiens].                 758   0.0  
Alignment   gi|NP_821133.1| tubulin beta chain [Homo sapiens].                   754   0.0  
Alignment   gi|NP_817124.1| tubulin beta-8 chain isoform 1 [Homo sapiens].       718   0.0  
Alignment   gi|NP_110400.1| tubulin beta-1 chain [Homo sapiens].                 664   0.0  
Alignment   gi|NP_001184110.1| tubulin beta-3 chain isoform 2 [Homo sapiens].    633   0.0  

>ref|NP_115914.1| tubulin beta-6 chain [Homo sapiens].
          Length = 446

 Score =  796 bits (2056), Expect = 0.0
 Identities = 391/426 (91%), Positives = 400/426 (93%)
 Frame = +3

Query: 63   MREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGGYVGDSALQLERINVYYNESSSQKYV 242
            MREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGGYVGDSALQLERINVYYNESSSQKYV
Sbjct: 1    MREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGGYVGDSALQLERINVYYNESSSQKYV 60

Query: 243  PRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELMDSVLDVV 422
            PRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAEL+D+VLDVV
Sbjct: 61   PRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELVDAVLDVV 120

Query: 423  RKESEHCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEFPDRIMNTFSVMPSPKVSDTVV 602
            RKE EHCDCLQGFQ                   KIREEFPDRIMNTFSVMPSPKVSDTVV
Sbjct: 121  RKECEHCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTFSVMPSPKVSDTVV 180

Query: 603  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSL 782
            EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSL
Sbjct: 181  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSL 240

Query: 783  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMM 962
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT+RGSQQYRALTVPELTQQMFDA+NMM
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDARNMM 300

Query: 963  AACDPRHGRYLTVATVFRGPMSMKEVDEQMLAIQNKNSSYFVEWIPNNVKVAVCDIPPCG 1142
            AACDPRHGRYLTVATVFRGPMSMKEVDEQMLAIQ+KNSSYFVEWIPNNVKVAVCDIPP G
Sbjct: 301  AACDPRHGRYLTVATVFRGPMSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVCDIPPRG 360

Query: 1143 LKMAATFIGNSTAIXELFQRISEQFFGMFPRKAFLHWFTGEXMDEMEFTEAESNMNELVS 1322
            LKMA+TFIGNSTAI ELF+RISEQF  MF RKAFLHWFTGE MDEMEFTEAESNMN+LVS
Sbjct: 361  LKMASTFIGNSTAIQELFKRISEQFSAMFRRKAFLHWFTGEGMDEMEFTEAESNMNDLVS 420

Query: 1323 DYQQYQ 1340
            +YQQYQ
Sbjct: 421  EYQQYQ 426


>ref|NP_006077.2| tubulin beta-3 chain isoform 1 [Homo sapiens].
          Length = 450

 Score =  764 bits (1974), Expect = 0.0
 Identities = 374/426 (87%), Positives = 391/426 (91%)
 Frame = +3

Query: 63   MREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGGYVGDSALQLERINVYYNESSSQKYV 242
            MREIVHIQAGQCGNQIG KFWEVISDEHGIDP+G YVGDS LQLERI+VYYNE+SS KYV
Sbjct: 1    MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPSGNYVGDSDLQLERISVYYNEASSHKYV 60

Query: 243  PRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELMDSVLDVV 422
            PRA LVDLEPGTMDSVRSG FG LFRPDNFIFGQ+GAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61   PRAILVDLEPGTMDSVRSGAFGHLFRPDNFIFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120

Query: 423  RKESEHCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEFPDRIMNTFSVMPSPKVSDTVV 602
            RKE E+CDCLQGFQ                   K+REE+PDRIMNTFSV+PSPKVSDTVV
Sbjct: 121  RKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKVREEYPDRIMNTFSVVPSPKVSDTVV 180

Query: 603  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSL 782
            EPYNATLS+HQLVENTDETYCIDNEALYDICFRTLKL TPTYGDLNHLVSATMSGVTTSL
Sbjct: 181  EPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKLATPTYGDLNHLVSATMSGVTTSL 240

Query: 783  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMM 962
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMM
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMM 300

Query: 963  AACDPRHGRYLTVATVFRGPMSMKEVDEQMLAIQNKNSSYFVEWIPNNVKVAVCDIPPCG 1142
            AACDPRHGRYLTVATVFRG MSMKEVDEQMLAIQ+KNSSYFVEWIPNNVKVAVCDIPP G
Sbjct: 301  AACDPRHGRYLTVATVFRGRMSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVCDIPPRG 360

Query: 1143 LKMAATFIGNSTAIXELFQRISEQFFGMFPRKAFLHWFTGEXMDEMEFTEAESNMNELVS 1322
            LKM++TFIGNSTAI ELF+RISEQF  MF RKAFLHW+TGE MDEMEFTEAESNMN+LVS
Sbjct: 361  LKMSSTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 1323 DYQQYQ 1340
            +YQQYQ
Sbjct: 421  EYQQYQ 426


>ref|NP_821080.1| tubulin beta-2B chain [Homo sapiens].
          Length = 445

 Score =  762 bits (1968), Expect = 0.0
 Identities = 371/426 (87%), Positives = 387/426 (90%)
 Frame = +3

Query: 63   MREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGGYVGDSALQLERINVYYNESSSQKYV 242
            MREIVHIQAGQCGNQIG KFWEVISDEHGIDP G Y GDS LQLERINVYYNE++  KYV
Sbjct: 1    MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEATGNKYV 60

Query: 243  PRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELMDSVLDVV 422
            PRA LVDLEPGTMDSVRSGPFGQ+FRPDNF+FGQ+GAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61   PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120

Query: 423  RKESEHCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEFPDRIMNTFSVMPSPKVSDTVV 602
            RKESE CDCLQGFQ                   KIREE+PDRIMNTFSVMPSPKVSDTVV
Sbjct: 121  RKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVV 180

Query: 603  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSL 782
            EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT L
Sbjct: 181  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240

Query: 783  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMM 962
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT+RGSQQYRALTVPELTQQMFD+KNMM
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMM 300

Query: 963  AACDPRHGRYLTVATVFRGPMSMKEVDEQMLAIQNKNSSYFVEWIPNNVKVAVCDIPPCG 1142
            AACDPRHGRYLTVA +FRG MSMKEVDEQML +QNKNSSYFVEWIPNNVK AVCDIPP G
Sbjct: 301  AACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 360

Query: 1143 LKMAATFIGNSTAIXELFQRISEQFFGMFPRKAFLHWFTGEXMDEMEFTEAESNMNELVS 1322
            LKM+ATFIGNSTAI ELF+RISEQF  MF RKAFLHW+TGE MDEMEFTEAESNMN+LVS
Sbjct: 361  LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 1323 DYQQYQ 1340
            +YQQYQ
Sbjct: 421  EYQQYQ 426


>ref|NP_006079.1| tubulin beta-2C chain [Homo sapiens].
          Length = 445

 Score =  759 bits (1960), Expect = 0.0
 Identities = 370/426 (86%), Positives = 387/426 (90%)
 Frame = +3

Query: 63   MREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGGYVGDSALQLERINVYYNESSSQKYV 242
            MREIVH+QAGQCGNQIG KFWEVISDEHGIDP G Y GDS LQLERINVYYNE++  KYV
Sbjct: 1    MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60

Query: 243  PRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELMDSVLDVV 422
            PRA LVDLEPGTMDSVRSGPFGQ+FRPDNF+FGQ+GAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61   PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120

Query: 423  RKESEHCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEFPDRIMNTFSVMPSPKVSDTVV 602
            RKE+E CDCLQGFQ                   KIREE+PDRIMNTFSV+PSPKVSDTVV
Sbjct: 121  RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV 180

Query: 603  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSL 782
            EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT L
Sbjct: 181  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240

Query: 783  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMM 962
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT+RGSQQYRALTVPELTQQMFDAKNMM
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 300

Query: 963  AACDPRHGRYLTVATVFRGPMSMKEVDEQMLAIQNKNSSYFVEWIPNNVKVAVCDIPPCG 1142
            AACDPRHGRYLTVA VFRG MSMKEVDEQML +QNKNSSYFVEWIPNNVK AVCDIPP G
Sbjct: 301  AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 360

Query: 1143 LKMAATFIGNSTAIXELFQRISEQFFGMFPRKAFLHWFTGEXMDEMEFTEAESNMNELVS 1322
            LKM+ATFIGNSTAI ELF+RISEQF  MF RKAFLHW+TGE MDEMEFTEAESNMN+LVS
Sbjct: 361  LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 1323 DYQQYQ 1340
            +YQQYQ
Sbjct: 421  EYQQYQ 426


>ref|NP_001060.1| tubulin beta-2A chain [Homo sapiens].
          Length = 445

 Score =  758 bits (1958), Expect = 0.0
 Identities = 370/426 (86%), Positives = 386/426 (90%)
 Frame = +3

Query: 63   MREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGGYVGDSALQLERINVYYNESSSQKYV 242
            MREIVHIQAGQCGNQIG KFWEVISDEHGIDP G Y GDS LQLERINVYYNE++  KYV
Sbjct: 1    MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEAAGNKYV 60

Query: 243  PRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELMDSVLDVV 422
            PRA LVDLEPGTMDSVRSGPFGQ+FRPDNF+FGQ+GAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61   PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120

Query: 423  RKESEHCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEFPDRIMNTFSVMPSPKVSDTVV 602
            RKESE CDCLQGFQ                   KIREE+PDRIMNTFSVMPSPKVSDTVV
Sbjct: 121  RKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVV 180

Query: 603  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSL 782
            EPYNATLSVHQLVENTDETY IDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT L
Sbjct: 181  EPYNATLSVHQLVENTDETYSIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240

Query: 783  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMM 962
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT+RGSQQYRALTVPELTQQMFD+KNMM
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMM 300

Query: 963  AACDPRHGRYLTVATVFRGPMSMKEVDEQMLAIQNKNSSYFVEWIPNNVKVAVCDIPPCG 1142
            AACDPRHGRYLTVA +FRG MSMKEVDEQML +QNKNSSYFVEWIPNNVK AVCDIPP G
Sbjct: 301  AACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 360

Query: 1143 LKMAATFIGNSTAIXELFQRISEQFFGMFPRKAFLHWFTGEXMDEMEFTEAESNMNELVS 1322
            LKM+ATFIGNSTAI ELF+RISEQF  MF RKAFLHW+TGE MDEMEFTEAESNMN+LVS
Sbjct: 361  LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 1323 DYQQYQ 1340
            +YQQYQ
Sbjct: 421  EYQQYQ 426


>ref|NP_006078.2| tubulin beta-4 chain [Homo sapiens].
          Length = 444

 Score =  758 bits (1956), Expect = 0.0
 Identities = 369/426 (86%), Positives = 387/426 (90%)
 Frame = +3

Query: 63   MREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGGYVGDSALQLERINVYYNESSSQKYV 242
            MREIVH+QAGQCGNQIG KFWEVISDEHGIDP G Y GDS LQLERINVYYNE++   YV
Sbjct: 1    MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGNYV 60

Query: 243  PRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELMDSVLDVV 422
            PRA LVDLEPGTMDSVRSGPFGQ+FRPDNF+FGQ+GAGNNWAKGHYTEGAEL+D+VLDVV
Sbjct: 61   PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDAVLDVV 120

Query: 423  RKESEHCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEFPDRIMNTFSVMPSPKVSDTVV 602
            RKE+E CDCLQGFQ                   KIREEFPDRIMNTFSV+PSPKVSDTVV
Sbjct: 121  RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTFSVVPSPKVSDTVV 180

Query: 603  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSL 782
            EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT L
Sbjct: 181  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240

Query: 783  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMM 962
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT+RGSQQYRALTVPELTQQMFDAKNMM
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 300

Query: 963  AACDPRHGRYLTVATVFRGPMSMKEVDEQMLAIQNKNSSYFVEWIPNNVKVAVCDIPPCG 1142
            AACDPRHGRYLTVA VFRG MSMKEVDEQML++Q+KNSSYFVEWIPNNVK AVCDIPP G
Sbjct: 301  AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLSVQSKNSSYFVEWIPNNVKTAVCDIPPRG 360

Query: 1143 LKMAATFIGNSTAIXELFQRISEQFFGMFPRKAFLHWFTGEXMDEMEFTEAESNMNELVS 1322
            LKMAATFIGNSTAI ELF+RISEQF  MF RKAFLHW+TGE MDEMEFTEAESNMN+LVS
Sbjct: 361  LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 1323 DYQQYQ 1340
            +YQQYQ
Sbjct: 421  EYQQYQ 426


>ref|NP_821133.1| tubulin beta chain [Homo sapiens].
          Length = 444

 Score =  754 bits (1948), Expect = 0.0
 Identities = 368/426 (86%), Positives = 386/426 (90%)
 Frame = +3

Query: 63   MREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGGYVGDSALQLERINVYYNESSSQKYV 242
            MREIVHIQAGQCGNQIG KFWEVISDEHGIDP G Y GDS LQL+RI+VYYNE++  KYV
Sbjct: 1    MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYV 60

Query: 243  PRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELMDSVLDVV 422
            PRA LVDLEPGTMDSVRSGPFGQ+FRPDNF+FGQ+GAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61   PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120

Query: 423  RKESEHCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEFPDRIMNTFSVMPSPKVSDTVV 602
            RKE+E CDCLQGFQ                   KIREE+PDRIMNTFSV+PSPKVSDTVV
Sbjct: 121  RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV 180

Query: 603  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSL 782
            EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT L
Sbjct: 181  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240

Query: 783  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMM 962
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT+RGSQQYRALTVPELTQQ+FDAKNMM
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMM 300

Query: 963  AACDPRHGRYLTVATVFRGPMSMKEVDEQMLAIQNKNSSYFVEWIPNNVKVAVCDIPPCG 1142
            AACDPRHGRYLTVA VFRG MSMKEVDEQML +QNKNSSYFVEWIPNNVK AVCDIPP G
Sbjct: 301  AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 360

Query: 1143 LKMAATFIGNSTAIXELFQRISEQFFGMFPRKAFLHWFTGEXMDEMEFTEAESNMNELVS 1322
            LKMA TFIGNSTAI ELF+RISEQF  MF RKAFLHW+TGE MDEMEFTEAESNMN+LVS
Sbjct: 361  LKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 1323 DYQQYQ 1340
            +YQQYQ
Sbjct: 421  EYQQYQ 426


>ref|NP_817124.1| tubulin beta-8 chain isoform 1 [Homo sapiens].
          Length = 444

 Score =  718 bits (1854), Expect = 0.0
 Identities = 348/426 (81%), Positives = 374/426 (87%)
 Frame = +3

Query: 63   MREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGGYVGDSALQLERINVYYNESSSQKYV 242
            MREIV  Q GQCGNQIG KFWEVISDEH ID AG Y GDS LQLERINVYYNE+S  +YV
Sbjct: 1    MREIVLTQIGQCGNQIGAKFWEVISDEHAIDSAGTYHGDSHLQLERINVYYNEASGGRYV 60

Query: 243  PRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELMDSVLDVV 422
            PRA LVDLEPGTMDSVRSGPFGQ+FRPDNFIFGQ GAGNNWAKGHYTEGAELM+SV+DVV
Sbjct: 61   PRAVLVDLEPGTMDSVRSGPFGQVFRPDNFIFGQCGAGNNWAKGHYTEGAELMESVMDVV 120

Query: 423  RKESEHCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEFPDRIMNTFSVMPSPKVSDTVV 602
            RKE+E CDCLQGFQ                   KIREE+PDRI+NTFS++PSPKVSDTVV
Sbjct: 121  RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLLSKIREEYPDRIINTFSILPSPKVSDTVV 180

Query: 603  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSL 782
            EPYNATLSVHQL+EN DET+CIDNEALYDIC +TLKL TPTYGDLNHLVSATMSGVTT L
Sbjct: 181  EPYNATLSVHQLIENADETFCIDNEALYDICSKTLKLPTPTYGDLNHLVSATMSGVTTCL 240

Query: 783  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMM 962
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT+RGSQQYRALTV ELTQQMFDAKNMM
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVAELTQQMFDAKNMM 300

Query: 963  AACDPRHGRYLTVATVFRGPMSMKEVDEQMLAIQNKNSSYFVEWIPNNVKVAVCDIPPCG 1142
            AACDPRHGRYLT A +FRG M M+EVDEQM  IQ+KNSSYF +W+PNNVK AVCDIPP G
Sbjct: 301  AACDPRHGRYLTAAAIFRGRMPMREVDEQMFNIQDKNSSYFADWLPNNVKTAVCDIPPRG 360

Query: 1143 LKMAATFIGNSTAIXELFQRISEQFFGMFPRKAFLHWFTGEXMDEMEFTEAESNMNELVS 1322
            LKM+ATFIGN+TAI ELF+R+SEQF  MF RKAFLHW+TGE MDEMEFTEAESNMN+LVS
Sbjct: 361  LKMSATFIGNNTAIQELFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 1323 DYQQYQ 1340
            +YQQYQ
Sbjct: 421  EYQQYQ 426


>ref|NP_110400.1| tubulin beta-1 chain [Homo sapiens].
          Length = 451

 Score =  664 bits (1712), Expect = 0.0
 Identities = 321/426 (75%), Positives = 361/426 (84%)
 Frame = +3

Query: 63   MREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGGYVGDSALQLERINVYYNESSSQKYV 242
            MREIVHIQ GQCGNQIG KFWE+I +EHGID AG   G SALQLERI+VYYNE+  +KYV
Sbjct: 1    MREIVHIQIGQCGNQIGAKFWEMIGEEHGIDLAGSDRGASALQLERISVYYNEAYGRKYV 60

Query: 243  PRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELMDSVLDVV 422
            PRA LVDLEPGTMDS+RS   G LF+PD+F+ G +GAGNNWAKGHYTEGAEL+++VL+VV
Sbjct: 61   PRAVLVDLEPGTMDSIRSSKLGALFQPDSFVHGNSGAGNNWAKGHYTEGAELIENVLEVV 120

Query: 423  RKESEHCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEFPDRIMNTFSVMPSPKVSDTVV 602
            R ESE CDCLQGFQ                   KIREE+PDRIMN+FSVMPSPKVSDTVV
Sbjct: 121  RHESESCDCLQGFQIVHSLGGGTGSGMGTLLMNKIREEYPDRIMNSFSVMPSPKVSDTVV 180

Query: 603  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSL 782
            EPYNA LS+HQL+EN D  +CIDNEALYDICFRTLKLTTPTYGDLNHLVS TMSG+TTSL
Sbjct: 181  EPYNAVLSIHQLIENADACFCIDNEALYDICFRTLKLTTPTYGDLNHLVSLTMSGITTSL 240

Query: 783  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMM 962
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTA+GSQQYRAL+V ELTQQMFDA+N M
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTAQGSQQYRALSVAELTQQMFDARNTM 300

Query: 963  AACDPRHGRYLTVATVFRGPMSMKEVDEQMLAIQNKNSSYFVEWIPNNVKVAVCDIPPCG 1142
            AACD R GRYLTVA +FRG MS KEVD+Q+L++Q +NSS FVEWIPNNVKVAVCDIPP G
Sbjct: 301  AACDLRRGRYLTVACIFRGKMSTKEVDQQLLSVQTRNSSCFVEWIPNNVKVAVCDIPPRG 360

Query: 1143 LKMAATFIGNSTAIXELFQRISEQFFGMFPRKAFLHWFTGEXMDEMEFTEAESNMNELVS 1322
            L MAATFIGN+TAI E+F R+SE F  MF RKAF+HW+T E MD  EF EAE+N+++LVS
Sbjct: 361  LSMAATFIGNNTAIQEIFNRVSEHFSAMFKRKAFVHWYTSEGMDINEFGEAENNIHDLVS 420

Query: 1323 DYQQYQ 1340
            +YQQ+Q
Sbjct: 421  EYQQFQ 426


>ref|NP_001184110.1| tubulin beta-3 chain isoform 2 [Homo sapiens].
          Length = 378

 Score =  633 bits (1632), Expect = 0.0
 Identities = 310/354 (87%), Positives = 324/354 (91%)
 Frame = +3

Query: 279  MDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELMDSVLDVVRKESEHCDCLQG 458
            MDSVRSG FG LFRPDNFIFGQ+GAGNNWAKGHYTEGAEL+DSVLDVVRKE E+CDCLQG
Sbjct: 1    MDSVRSGAFGHLFRPDNFIFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKECENCDCLQG 60

Query: 459  FQXXXXXXXXXXXXXXXXXXXKIREEFPDRIMNTFSVMPSPKVSDTVVEPYNATLSVHQL 638
            FQ                   K+REE+PDRIMNTFSV+PSPKVSDTVVEPYNATLS+HQL
Sbjct: 61   FQLTHSLGGGTGSGMGTLLISKVREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSIHQL 120

Query: 639  VENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSLRFPGQLNADLRK 818
            VENTDETYCIDNEALYDICFRTLKL TPTYGDLNHLVSATMSGVTTSLRFPGQLNADLRK
Sbjct: 121  VENTDETYCIDNEALYDICFRTLKLATPTYGDLNHLVSATMSGVTTSLRFPGQLNADLRK 180

Query: 819  LAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLT 998
            LAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLT
Sbjct: 181  LAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLT 240

Query: 999  VATVFRGPMSMKEVDEQMLAIQNKNSSYFVEWIPNNVKVAVCDIPPCGLKMAATFIGNST 1178
            VATVFRG MSMKEVDEQMLAIQ+KNSSYFVEWIPNNVKVAVCDIPP GLKM++TFIGNST
Sbjct: 241  VATVFRGRMSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVCDIPPRGLKMSSTFIGNST 300

Query: 1179 AIXELFQRISEQFFGMFPRKAFLHWFTGEXMDEMEFTEAESNMNELVSDYQQYQ 1340
            AI ELF+RISEQF  MF RKAFLHW+TGE MDEMEFTEAESNMN+LVS+YQQYQ
Sbjct: 301  AIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 354


  Database: RefSeq49_HP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,297,164
  Number of sequences in database:  32,964
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 53,807,632
Number of extensions: 1526048
Number of successful extensions: 6395
Number of sequences better than 1.0e-05: 28
Number of HSP's gapped: 6305
Number of HSP's successfully gapped: 28
Length of query: 446
Length of database: 18,297,164
Length adjustment: 106
Effective length of query: 340
Effective length of database: 14,802,980
Effective search space: 5033013200
Effective search space used: 5033013200
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-006969
         (1340 letters)

Database: RefSeq49_MP.fasta 
           30,036 sequences; 15,617,559 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_080749.2| tubulin beta-6 chain [Mus musculus].                 794   0.0  
Alignment   gi|NP_075768.1| tubulin beta-3 chain [Mus musculus].                 764   0.0  
Alignment   gi|NP_076205.1| tubulin beta-2B chain [Mus musculus].                762   0.0  
Alignment   gi|NP_666228.1| tubulin beta-2C chain [Mus musculus].                759   0.0  
Alignment   gi|NP_033476.1| tubulin beta-2A chain [Mus musculus].                758   0.0  
Alignment   gi|NP_033477.2| tubulin beta-4 chain [Mus musculus].                 758   0.0  
Alignment   gi|NP_035785.1| tubulin beta-5 chain [Mus musculus].                 754   0.0  
Alignment   gi|XP_003086598.1| PREDICTED: tubulin beta-3 chain-like [Mus mu...   715   0.0  
Alignment   gi|XP_003084702.1| PREDICTED: tubulin beta-3 chain-like [Mus mu...   710   0.0  
Alignment   gi|NP_001074440.1| tubulin, beta 1 [Mus musculus].                   672   0.0  

>ref|NP_080749.2| tubulin beta-6 chain [Mus musculus].
          Length = 447

 Score =  794 bits (2050), Expect = 0.0
 Identities = 391/426 (91%), Positives = 399/426 (93%)
 Frame = +3

Query: 63   MREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGGYVGDSALQLERINVYYNESSSQKYV 242
            MREIVHIQAGQCGNQIGTKFWEVISDEHGID AGGYVGDSALQLERI+VYYNESSS+KYV
Sbjct: 1    MREIVHIQAGQCGNQIGTKFWEVISDEHGIDQAGGYVGDSALQLERISVYYNESSSKKYV 60

Query: 243  PRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELMDSVLDVV 422
            PRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61   PRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELVDSVLDVV 120

Query: 423  RKESEHCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEFPDRIMNTFSVMPSPKVSDTVV 602
            RKE EHCDCLQGFQ                   KIREE+PDRIMNTFSVMPSPKVSDTVV
Sbjct: 121  RKECEHCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVV 180

Query: 603  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSL 782
            EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSL
Sbjct: 181  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSL 240

Query: 783  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMM 962
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMM
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMM 300

Query: 963  AACDPRHGRYLTVATVFRGPMSMKEVDEQMLAIQNKNSSYFVEWIPNNVKVAVCDIPPCG 1142
            AACDPRHGRYLTVATVFRGPMSMKEVDEQMLAIQNKNSSYFVEWIPNNVKVAVCDIPP G
Sbjct: 301  AACDPRHGRYLTVATVFRGPMSMKEVDEQMLAIQNKNSSYFVEWIPNNVKVAVCDIPPRG 360

Query: 1143 LKMAATFIGNSTAIXELFQRISEQFFGMFPRKAFLHWFTGEXMDEMEFTEAESNMNELVS 1322
            LKMA+TFIGNSTAI ELF+RISEQF  MF RKAFLHWFTGE MDEMEFTEAESNMN+LVS
Sbjct: 361  LKMASTFIGNSTAIQELFKRISEQFSAMFRRKAFLHWFTGEGMDEMEFTEAESNMNDLVS 420

Query: 1323 DYQQYQ 1340
            +YQQYQ
Sbjct: 421  EYQQYQ 426


>ref|NP_075768.1| tubulin beta-3 chain [Mus musculus].
          Length = 450

 Score =  764 bits (1974), Expect = 0.0
 Identities = 374/426 (87%), Positives = 391/426 (91%)
 Frame = +3

Query: 63   MREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGGYVGDSALQLERINVYYNESSSQKYV 242
            MREIVHIQAGQCGNQIG KFWEVISDEHGIDP+G YVGDS LQLERI+VYYNE+SS KYV
Sbjct: 1    MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPSGNYVGDSDLQLERISVYYNEASSHKYV 60

Query: 243  PRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELMDSVLDVV 422
            PRA LVDLEPGTMDSVRSG FG LFRPDNFIFGQ+GAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61   PRAILVDLEPGTMDSVRSGAFGHLFRPDNFIFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120

Query: 423  RKESEHCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEFPDRIMNTFSVMPSPKVSDTVV 602
            RKE E+CDCLQGFQ                   K+REE+PDRIMNTFSV+PSPKVSDTVV
Sbjct: 121  RKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKVREEYPDRIMNTFSVVPSPKVSDTVV 180

Query: 603  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSL 782
            EPYNATLS+HQLVENTDETYCIDNEALYDICFRTLKL TPTYGDLNHLVSATMSGVTTSL
Sbjct: 181  EPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKLATPTYGDLNHLVSATMSGVTTSL 240

Query: 783  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMM 962
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMM
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMM 300

Query: 963  AACDPRHGRYLTVATVFRGPMSMKEVDEQMLAIQNKNSSYFVEWIPNNVKVAVCDIPPCG 1142
            AACDPRHGRYLTVATVFRG MSMKEVDEQMLAIQ+KNSSYFVEWIPNNVKVAVCDIPP G
Sbjct: 301  AACDPRHGRYLTVATVFRGRMSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVCDIPPRG 360

Query: 1143 LKMAATFIGNSTAIXELFQRISEQFFGMFPRKAFLHWFTGEXMDEMEFTEAESNMNELVS 1322
            LKM++TFIGNSTAI ELF+RISEQF  MF RKAFLHW+TGE MDEMEFTEAESNMN+LVS
Sbjct: 361  LKMSSTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 1323 DYQQYQ 1340
            +YQQYQ
Sbjct: 421  EYQQYQ 426


>ref|NP_076205.1| tubulin beta-2B chain [Mus musculus].
          Length = 445

 Score =  762 bits (1968), Expect = 0.0
 Identities = 371/426 (87%), Positives = 387/426 (90%)
 Frame = +3

Query: 63   MREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGGYVGDSALQLERINVYYNESSSQKYV 242
            MREIVHIQAGQCGNQIG KFWEVISDEHGIDP G Y GDS LQLERINVYYNE++  KYV
Sbjct: 1    MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEATGNKYV 60

Query: 243  PRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELMDSVLDVV 422
            PRA LVDLEPGTMDSVRSGPFGQ+FRPDNF+FGQ+GAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61   PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120

Query: 423  RKESEHCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEFPDRIMNTFSVMPSPKVSDTVV 602
            RKESE CDCLQGFQ                   KIREE+PDRIMNTFSVMPSPKVSDTVV
Sbjct: 121  RKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVV 180

Query: 603  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSL 782
            EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT L
Sbjct: 181  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240

Query: 783  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMM 962
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT+RGSQQYRALTVPELTQQMFD+KNMM
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMM 300

Query: 963  AACDPRHGRYLTVATVFRGPMSMKEVDEQMLAIQNKNSSYFVEWIPNNVKVAVCDIPPCG 1142
            AACDPRHGRYLTVA +FRG MSMKEVDEQML +QNKNSSYFVEWIPNNVK AVCDIPP G
Sbjct: 301  AACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 360

Query: 1143 LKMAATFIGNSTAIXELFQRISEQFFGMFPRKAFLHWFTGEXMDEMEFTEAESNMNELVS 1322
            LKM+ATFIGNSTAI ELF+RISEQF  MF RKAFLHW+TGE MDEMEFTEAESNMN+LVS
Sbjct: 361  LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 1323 DYQQYQ 1340
            +YQQYQ
Sbjct: 421  EYQQYQ 426


>ref|NP_666228.1| tubulin beta-2C chain [Mus musculus].
          Length = 445

 Score =  759 bits (1960), Expect = 0.0
 Identities = 370/426 (86%), Positives = 387/426 (90%)
 Frame = +3

Query: 63   MREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGGYVGDSALQLERINVYYNESSSQKYV 242
            MREIVH+QAGQCGNQIG KFWEVISDEHGIDP G Y GDS LQLERINVYYNE++  KYV
Sbjct: 1    MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60

Query: 243  PRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELMDSVLDVV 422
            PRA LVDLEPGTMDSVRSGPFGQ+FRPDNF+FGQ+GAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61   PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120

Query: 423  RKESEHCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEFPDRIMNTFSVMPSPKVSDTVV 602
            RKE+E CDCLQGFQ                   KIREE+PDRIMNTFSV+PSPKVSDTVV
Sbjct: 121  RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV 180

Query: 603  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSL 782
            EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT L
Sbjct: 181  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240

Query: 783  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMM 962
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT+RGSQQYRALTVPELTQQMFDAKNMM
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 300

Query: 963  AACDPRHGRYLTVATVFRGPMSMKEVDEQMLAIQNKNSSYFVEWIPNNVKVAVCDIPPCG 1142
            AACDPRHGRYLTVA VFRG MSMKEVDEQML +QNKNSSYFVEWIPNNVK AVCDIPP G
Sbjct: 301  AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 360

Query: 1143 LKMAATFIGNSTAIXELFQRISEQFFGMFPRKAFLHWFTGEXMDEMEFTEAESNMNELVS 1322
            LKM+ATFIGNSTAI ELF+RISEQF  MF RKAFLHW+TGE MDEMEFTEAESNMN+LVS
Sbjct: 361  LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 1323 DYQQYQ 1340
            +YQQYQ
Sbjct: 421  EYQQYQ 426


>ref|NP_033476.1| tubulin beta-2A chain [Mus musculus].
          Length = 445

 Score =  758 bits (1958), Expect = 0.0
 Identities = 370/426 (86%), Positives = 386/426 (90%)
 Frame = +3

Query: 63   MREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGGYVGDSALQLERINVYYNESSSQKYV 242
            MREIVHIQAGQCGNQIG KFWEVISDEHGIDP G Y GDS LQLERINVYYNE++  KYV
Sbjct: 1    MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEAAGNKYV 60

Query: 243  PRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELMDSVLDVV 422
            PRA LVDLEPGTMDSVRSGPFGQ+FRPDNF+FGQ+GAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61   PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120

Query: 423  RKESEHCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEFPDRIMNTFSVMPSPKVSDTVV 602
            RKESE CDCLQGFQ                   KIREE+PDRIMNTFSVMPSPKVSDTVV
Sbjct: 121  RKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVV 180

Query: 603  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSL 782
            EPYNATLSVHQLVENTDETY IDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT L
Sbjct: 181  EPYNATLSVHQLVENTDETYSIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240

Query: 783  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMM 962
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT+RGSQQYRALTVPELTQQMFD+KNMM
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMM 300

Query: 963  AACDPRHGRYLTVATVFRGPMSMKEVDEQMLAIQNKNSSYFVEWIPNNVKVAVCDIPPCG 1142
            AACDPRHGRYLTVA +FRG MSMKEVDEQML +QNKNSSYFVEWIPNNVK AVCDIPP G
Sbjct: 301  AACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 360

Query: 1143 LKMAATFIGNSTAIXELFQRISEQFFGMFPRKAFLHWFTGEXMDEMEFTEAESNMNELVS 1322
            LKM+ATFIGNSTAI ELF+RISEQF  MF RKAFLHW+TGE MDEMEFTEAESNMN+LVS
Sbjct: 361  LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 1323 DYQQYQ 1340
            +YQQYQ
Sbjct: 421  EYQQYQ 426


>ref|NP_033477.2| tubulin beta-4 chain [Mus musculus].
          Length = 444

 Score =  758 bits (1956), Expect = 0.0
 Identities = 369/426 (86%), Positives = 387/426 (90%)
 Frame = +3

Query: 63   MREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGGYVGDSALQLERINVYYNESSSQKYV 242
            MREIVH+QAGQCGNQIG KFWEVISDEHGIDP G Y GDS LQLERINVYYNE++   YV
Sbjct: 1    MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGNYV 60

Query: 243  PRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELMDSVLDVV 422
            PRA LVDLEPGTMDSVRSGPFGQ+FRPDNF+FGQ+GAGNNWAKGHYTEGAEL+D+VLDVV
Sbjct: 61   PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDAVLDVV 120

Query: 423  RKESEHCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEFPDRIMNTFSVMPSPKVSDTVV 602
            RKE+E CDCLQGFQ                   KIREEFPDRIMNTFSV+PSPKVSDTVV
Sbjct: 121  RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTFSVVPSPKVSDTVV 180

Query: 603  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSL 782
            EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT L
Sbjct: 181  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240

Query: 783  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMM 962
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT+RGSQQYRALTVPELTQQMFDAKNMM
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 300

Query: 963  AACDPRHGRYLTVATVFRGPMSMKEVDEQMLAIQNKNSSYFVEWIPNNVKVAVCDIPPCG 1142
            AACDPRHGRYLTVA VFRG MSMKEVDEQML++Q+KNSSYFVEWIPNNVK AVCDIPP G
Sbjct: 301  AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLSVQSKNSSYFVEWIPNNVKTAVCDIPPRG 360

Query: 1143 LKMAATFIGNSTAIXELFQRISEQFFGMFPRKAFLHWFTGEXMDEMEFTEAESNMNELVS 1322
            LKMAATFIGNSTAI ELF+RISEQF  MF RKAFLHW+TGE MDEMEFTEAESNMN+LVS
Sbjct: 361  LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 1323 DYQQYQ 1340
            +YQQYQ
Sbjct: 421  EYQQYQ 426


>ref|NP_035785.1| tubulin beta-5 chain [Mus musculus].
          Length = 444

 Score =  754 bits (1948), Expect = 0.0
 Identities = 368/426 (86%), Positives = 386/426 (90%)
 Frame = +3

Query: 63   MREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGGYVGDSALQLERINVYYNESSSQKYV 242
            MREIVHIQAGQCGNQIG KFWEVISDEHGIDP G Y GDS LQL+RI+VYYNE++  KYV
Sbjct: 1    MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYV 60

Query: 243  PRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELMDSVLDVV 422
            PRA LVDLEPGTMDSVRSGPFGQ+FRPDNF+FGQ+GAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61   PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120

Query: 423  RKESEHCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEFPDRIMNTFSVMPSPKVSDTVV 602
            RKE+E CDCLQGFQ                   KIREE+PDRIMNTFSV+PSPKVSDTVV
Sbjct: 121  RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV 180

Query: 603  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSL 782
            EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT L
Sbjct: 181  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240

Query: 783  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMM 962
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT+RGSQQYRALTVPELTQQ+FDAKNMM
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMM 300

Query: 963  AACDPRHGRYLTVATVFRGPMSMKEVDEQMLAIQNKNSSYFVEWIPNNVKVAVCDIPPCG 1142
            AACDPRHGRYLTVA VFRG MSMKEVDEQML +QNKNSSYFVEWIPNNVK AVCDIPP G
Sbjct: 301  AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 360

Query: 1143 LKMAATFIGNSTAIXELFQRISEQFFGMFPRKAFLHWFTGEXMDEMEFTEAESNMNELVS 1322
            LKMA TFIGNSTAI ELF+RISEQF  MF RKAFLHW+TGE MDEMEFTEAESNMN+LVS
Sbjct: 361  LKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 1323 DYQQYQ 1340
            +YQQYQ
Sbjct: 421  EYQQYQ 426


>ref|XP_003086598.1| PREDICTED: tubulin beta-3 chain-like [Mus musculus].
          Length = 443

 Score =  715 bits (1846), Expect = 0.0
 Identities = 353/426 (82%), Positives = 376/426 (88%)
 Frame = +3

Query: 63   MREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGGYVGDSALQLERINVYYNESSSQKYV 242
            MREIVHIQAGQCGNQIG KFWEVISD+HGIDP+G YVGDS LQLERI++YYNE+SS KYV
Sbjct: 1    MREIVHIQAGQCGNQIGAKFWEVISDDHGIDPSGNYVGDSDLQLERISMYYNEASSHKYV 60

Query: 243  PRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELMDSVLDVV 422
            PRA  V LEPGTMDSVRSG FG LFRPDNFIF Q+G GNNWAKGHY EGAEL DSVLDVV
Sbjct: 61   PRAIRVYLEPGTMDSVRSGAFGHLFRPDNFIFDQSGTGNNWAKGHYREGAELEDSVLDVV 120

Query: 423  RKESEHCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEFPDRIMNTFSVMPSPKVSDTVV 602
            +K+ E+CDCLQGFQ                   K+REE+PDRIMNTFSV+PSPKVSDTVV
Sbjct: 121  QKQCENCDCLQGFQLTHSLGGGTLLIS------KVREEYPDRIMNTFSVVPSPKVSDTVV 174

Query: 603  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSL 782
            EPYNATLS+HQLVEN DETYCIDNEALY ICFRT+KL TPT+GDLNHLVSATMSGVTTSL
Sbjct: 175  EPYNATLSIHQLVENMDETYCIDNEALYYICFRTVKLATPTHGDLNHLVSATMSGVTTSL 234

Query: 783  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMM 962
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGF PLTARGSQQYRALTVPELTQQMFDAKNMM
Sbjct: 235  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFTPLTARGSQQYRALTVPELTQQMFDAKNMM 294

Query: 963  AACDPRHGRYLTVATVFRGPMSMKEVDEQMLAIQNKNSSYFVEWIPNNVKVAVCDIPPCG 1142
            AACDP HGRYLTVATVFRG MSMKEVDEQMLAIQ+KNSSY VEWIPNNV VAVCDIPP G
Sbjct: 295  AACDPHHGRYLTVATVFRGRMSMKEVDEQMLAIQSKNSSYLVEWIPNNVNVAVCDIPPRG 354

Query: 1143 LKMAATFIGNSTAIXELFQRISEQFFGMFPRKAFLHWFTGEXMDEMEFTEAESNMNELVS 1322
            LKM++TFIGNSTAI ELF+ ISEQF  MF  KAFLHW+TGE MDE+EFTEAESNMN+LV 
Sbjct: 355  LKMSSTFIGNSTAIQELFKCISEQFTAMFRCKAFLHWYTGEGMDEIEFTEAESNMNDLVF 414

Query: 1323 DYQQYQ 1340
            +YQQYQ
Sbjct: 415  EYQQYQ 420


>ref|XP_003084702.1| PREDICTED: tubulin beta-3 chain-like [Mus musculus].
          Length = 443

 Score =  710 bits (1833), Expect = 0.0
 Identities = 350/426 (82%), Positives = 375/426 (88%)
 Frame = +3

Query: 63   MREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGGYVGDSALQLERINVYYNESSSQKYV 242
            MREIVHIQAGQCGNQIG KFWEVISD+HGIDP+G YVGDS LQLERI++YYNE+SS KY+
Sbjct: 1    MREIVHIQAGQCGNQIGAKFWEVISDDHGIDPSGNYVGDSDLQLERISMYYNEASSHKYL 60

Query: 243  PRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELMDSVLDVV 422
            PRA LV LEPGTMDSVRSG FG LFRPDNFIFGQ+G GNNWAKGHY EGAEL DSVLDVV
Sbjct: 61   PRAILVYLEPGTMDSVRSGAFGHLFRPDNFIFGQSGTGNNWAKGHYREGAELEDSVLDVV 120

Query: 423  RKESEHCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEFPDRIMNTFSVMPSPKVSDTVV 602
            RK+ E+CDCLQGFQ                   K+REE+PDRIMNTFSV+PSPKVSDTVV
Sbjct: 121  RKQCENCDCLQGFQLTHSLGGGTLLIS------KVREEYPDRIMNTFSVVPSPKVSDTVV 174

Query: 603  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSL 782
            EPYNA+LS+HQLVEN DETYCI+NEALYDICFRT+KL TPTYGDLNHLVSATMSGVTTSL
Sbjct: 175  EPYNASLSIHQLVENMDETYCINNEALYDICFRTVKLATPTYGDLNHLVSATMSGVTTSL 234

Query: 783  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMM 962
            RFPGQLNADLRK AVNM PFPRLHFFMPGFAPLT RGSQQYRALTVPELTQ MFDAKNMM
Sbjct: 235  RFPGQLNADLRKQAVNMXPFPRLHFFMPGFAPLTDRGSQQYRALTVPELTQXMFDAKNMM 294

Query: 963  AACDPRHGRYLTVATVFRGPMSMKEVDEQMLAIQNKNSSYFVEWIPNNVKVAVCDIPPCG 1142
            AA DPRHGRYLTVATVFRG MSMKEVDEQMLAIQ+KNSSY VEWIPNNV VAVCDIPP G
Sbjct: 295  AAYDPRHGRYLTVATVFRGRMSMKEVDEQMLAIQSKNSSYLVEWIPNNVNVAVCDIPPRG 354

Query: 1143 LKMAATFIGNSTAIXELFQRISEQFFGMFPRKAFLHWFTGEXMDEMEFTEAESNMNELVS 1322
            +KM++TFIGNSTA  ELF+ ISEQF  MF  KAFLHW+TGE MDE+EFTEAESNMN+LV 
Sbjct: 355  IKMSSTFIGNSTATQELFKCISEQFTAMFRCKAFLHWYTGEGMDEIEFTEAESNMNDLVF 414

Query: 1323 DYQQYQ 1340
            +YQQYQ
Sbjct: 415  EYQQYQ 420


>ref|NP_001074440.1| tubulin, beta 1 [Mus musculus].
          Length = 451

 Score =  672 bits (1734), Expect = 0.0
 Identities = 322/426 (75%), Positives = 366/426 (85%)
 Frame = +3

Query: 63   MREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGGYVGDSALQLERINVYYNESSSQKYV 242
            MREIVHIQ GQCGNQIG KFWEVI +EHGID AG Y G SALQLERI+VYYNE+  +KYV
Sbjct: 1    MREIVHIQIGQCGNQIGAKFWEVIGEEHGIDCAGSYCGTSALQLERISVYYNEAYGKKYV 60

Query: 243  PRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELMDSVLDVV 422
            PRA LVDLEPGTMDS+RS   G LF+PD+F+ G +GAGNNWAKGHYTEGAEL+++V+DVV
Sbjct: 61   PRAVLVDLEPGTMDSIRSSRLGVLFQPDSFVHGNSGAGNNWAKGHYTEGAELIENVMDVV 120

Query: 423  RKESEHCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEFPDRIMNTFSVMPSPKVSDTVV 602
            R+ESE CDCLQGFQ                   KIREE+PDRI+N+FSVMPSPKVSDTVV
Sbjct: 121  RRESESCDCLQGFQIVHSLGGGTGSGMGTLLMNKIREEYPDRILNSFSVMPSPKVSDTVV 180

Query: 603  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSL 782
            EPYNA LS+HQL+ENTD  +CIDNEALYDICFRTL+LTTPTYGDLNHLVS TMSG+TTSL
Sbjct: 181  EPYNAVLSIHQLIENTDACFCIDNEALYDICFRTLRLTTPTYGDLNHLVSLTMSGITTSL 240

Query: 783  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMM 962
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTA+GSQQYRAL+V ELTQQMFDA+N+M
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTAQGSQQYRALSVAELTQQMFDARNIM 300

Query: 963  AACDPRHGRYLTVATVFRGPMSMKEVDEQMLAIQNKNSSYFVEWIPNNVKVAVCDIPPCG 1142
            AACDPR GRYLTVA +FRG MS KEVD+Q+L+IQ +NS+ FVEWIPNNVKVAVCDIPP G
Sbjct: 301  AACDPRRGRYLTVACIFRGKMSTKEVDQQLLSIQTRNSNCFVEWIPNNVKVAVCDIPPRG 360

Query: 1143 LKMAATFIGNSTAIXELFQRISEQFFGMFPRKAFLHWFTGEXMDEMEFTEAESNMNELVS 1322
            L MAATF+GN+TAI ELF R+SE F  MF R+AF+HW+T E MD  EF EAES++++LVS
Sbjct: 361  LNMAATFLGNNTAIQELFTRVSEHFSAMFRRRAFVHWYTSEGMDISEFGEAESDIHDLVS 420

Query: 1323 DYQQYQ 1340
            +YQQ+Q
Sbjct: 421  EYQQFQ 426


  Database: RefSeq49_MP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 15,617,559
  Number of sequences in database:  30,036
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 45,336,920
Number of extensions: 1268139
Number of successful extensions: 5203
Number of sequences better than 1.0e-05: 28
Number of HSP's gapped: 5095
Number of HSP's successfully gapped: 28
Length of query: 446
Length of database: 15,617,559
Length adjustment: 105
Effective length of query: 341
Effective length of database: 12,463,779
Effective search space: 4250148639
Effective search space used: 4250148639
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-006969
         (1340 letters)

Database: RefSeq49_SP.fasta 
           24,897 sequences; 11,343,932 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001230363.1| tubulin beta-2B chain [Sus scrofa].               762   0.0  
Alignment   gi|XP_003122400.2| PREDICTED: tubulin beta-2C chain-like [Sus s...   759   0.0  
Alignment   gi|NP_001038077.1| tubulin beta chain [Sus scrofa].                  754   0.0  
Alignment   gi|NP_001107168.1| tubulin beta-1 chain [Sus scrofa].                667   0.0  
Alignment   gi|XP_003355769.1| PREDICTED: tubulin beta-3 chain-like [Sus sc...   633   0.0  
Alignment   gi|XP_003356396.1| PREDICTED: tubulin beta-6 chain-like, partia...   625   e-179
Alignment   gi|XP_003356561.1| PREDICTED: tubulin beta-2A chain-like [Sus s...   586   e-179
Alignment   gi|XP_003123158.2| PREDICTED: far upstream element-binding prot...   593   e-170
Alignment   gi|XP_003355423.1| PREDICTED: tubulin alpha-1C chain isoform 1 ...   339   2e-93
Alignment   gi|XP_001928233.1| PREDICTED: tubulin alpha-1D chain [Sus scrof...   339   2e-93

>ref|NP_001230363.1| tubulin beta-2B chain [Sus scrofa].
          Length = 445

 Score =  762 bits (1968), Expect = 0.0
 Identities = 371/426 (87%), Positives = 387/426 (90%)
 Frame = +3

Query: 63   MREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGGYVGDSALQLERINVYYNESSSQKYV 242
            MREIVHIQAGQCGNQIG KFWEVISDEHGIDP G Y GDS LQLERINVYYNE++  KYV
Sbjct: 1    MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEATGNKYV 60

Query: 243  PRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELMDSVLDVV 422
            PRA LVDLEPGTMDSVRSGPFGQ+FRPDNF+FGQ+GAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61   PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120

Query: 423  RKESEHCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEFPDRIMNTFSVMPSPKVSDTVV 602
            RKESE CDCLQGFQ                   KIREE+PDRIMNTFSVMPSPKVSDTVV
Sbjct: 121  RKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVV 180

Query: 603  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSL 782
            EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT L
Sbjct: 181  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240

Query: 783  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMM 962
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT+RGSQQYRALTVPELTQQMFD+KNMM
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMM 300

Query: 963  AACDPRHGRYLTVATVFRGPMSMKEVDEQMLAIQNKNSSYFVEWIPNNVKVAVCDIPPCG 1142
            AACDPRHGRYLTVA +FRG MSMKEVDEQML +QNKNSSYFVEWIPNNVK AVCDIPP G
Sbjct: 301  AACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 360

Query: 1143 LKMAATFIGNSTAIXELFQRISEQFFGMFPRKAFLHWFTGEXMDEMEFTEAESNMNELVS 1322
            LKM+ATFIGNSTAI ELF+RISEQF  MF RKAFLHW+TGE MDEMEFTEAESNMN+LVS
Sbjct: 361  LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 1323 DYQQYQ 1340
            +YQQYQ
Sbjct: 421  EYQQYQ 426


>ref|XP_003122400.2| PREDICTED: tubulin beta-2C chain-like [Sus scrofa].
          Length = 445

 Score =  759 bits (1960), Expect = 0.0
 Identities = 370/426 (86%), Positives = 387/426 (90%)
 Frame = +3

Query: 63   MREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGGYVGDSALQLERINVYYNESSSQKYV 242
            MREIVH+QAGQCGNQIG KFWEVISDEHGIDP G Y GDS LQLERINVYYNE++  KYV
Sbjct: 1    MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60

Query: 243  PRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELMDSVLDVV 422
            PRA LVDLEPGTMDSVRSGPFGQ+FRPDNF+FGQ+GAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61   PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120

Query: 423  RKESEHCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEFPDRIMNTFSVMPSPKVSDTVV 602
            RKE+E CDCLQGFQ                   KIREE+PDRIMNTFSV+PSPKVSDTVV
Sbjct: 121  RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV 180

Query: 603  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSL 782
            EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT L
Sbjct: 181  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240

Query: 783  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMM 962
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT+RGSQQYRALTVPELTQQMFDAKNMM
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 300

Query: 963  AACDPRHGRYLTVATVFRGPMSMKEVDEQMLAIQNKNSSYFVEWIPNNVKVAVCDIPPCG 1142
            AACDPRHGRYLTVA VFRG MSMKEVDEQML +QNKNSSYFVEWIPNNVK AVCDIPP G
Sbjct: 301  AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 360

Query: 1143 LKMAATFIGNSTAIXELFQRISEQFFGMFPRKAFLHWFTGEXMDEMEFTEAESNMNELVS 1322
            LKM+ATFIGNSTAI ELF+RISEQF  MF RKAFLHW+TGE MDEMEFTEAESNMN+LVS
Sbjct: 361  LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 1323 DYQQYQ 1340
            +YQQYQ
Sbjct: 421  EYQQYQ 426


>ref|NP_001038077.1| tubulin beta chain [Sus scrofa].
          Length = 444

 Score =  754 bits (1948), Expect = 0.0
 Identities = 368/426 (86%), Positives = 386/426 (90%)
 Frame = +3

Query: 63   MREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGGYVGDSALQLERINVYYNESSSQKYV 242
            MREIVHIQAGQCGNQIG KFWEVISDEHGIDP G Y GDS LQL+RI+VYYNE++  KYV
Sbjct: 1    MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYV 60

Query: 243  PRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELMDSVLDVV 422
            PRA LVDLEPGTMDSVRSGPFGQ+FRPDNF+FGQ+GAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61   PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120

Query: 423  RKESEHCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEFPDRIMNTFSVMPSPKVSDTVV 602
            RKE+E CDCLQGFQ                   KIREE+PDRIMNTFSV+PSPKVSDTVV
Sbjct: 121  RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV 180

Query: 603  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSL 782
            EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT L
Sbjct: 181  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240

Query: 783  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMM 962
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT+RGSQQYRALTVPELTQQ+FDAKNMM
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMM 300

Query: 963  AACDPRHGRYLTVATVFRGPMSMKEVDEQMLAIQNKNSSYFVEWIPNNVKVAVCDIPPCG 1142
            AACDPRHGRYLTVA VFRG MSMKEVDEQML +QNKNSSYFVEWIPNNVK AVCDIPP G
Sbjct: 301  AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 360

Query: 1143 LKMAATFIGNSTAIXELFQRISEQFFGMFPRKAFLHWFTGEXMDEMEFTEAESNMNELVS 1322
            LKMA TFIGNSTAI ELF+RISEQF  MF RKAFLHW+TGE MDEMEFTEAESNMN+LVS
Sbjct: 361  LKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 1323 DYQQYQ 1340
            +YQQYQ
Sbjct: 421  EYQQYQ 426


>ref|NP_001107168.1| tubulin beta-1 chain [Sus scrofa].
          Length = 449

 Score =  667 bits (1720), Expect = 0.0
 Identities = 322/426 (75%), Positives = 358/426 (84%)
 Frame = +3

Query: 63   MREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGGYVGDSALQLERINVYYNESSSQKYV 242
            MREIVHIQ GQCGNQIG+KFWEVI +EHGID AG Y GD ++QLERI+VYYNE+  +KYV
Sbjct: 1    MREIVHIQIGQCGNQIGSKFWEVIGEEHGIDGAGSYRGDCSVQLERISVYYNEAHGKKYV 60

Query: 243  PRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELMDSVLDVV 422
            PRA LVDLEPGTMDS+RS   G LFRPD+F+ G +GAGNNWAKGHYTEGAEL++ VLD V
Sbjct: 61   PRAVLVDLEPGTMDSIRSSRLGALFRPDSFVHGNSGAGNNWAKGHYTEGAELVEGVLDAV 120

Query: 423  RKESEHCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEFPDRIMNTFSVMPSPKVSDTVV 602
            R E+E CDCLQGFQ                   KIREEFPDRI+N+FSVMPS KVSDTVV
Sbjct: 121  RSEAEGCDCLQGFQVVHSLGGGTGSGMGTLLMGKIREEFPDRILNSFSVMPSAKVSDTVV 180

Query: 603  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSL 782
            EPYNA LS+HQL++N D  +CIDNEALYDIC RTL+LTTPTYGDLNHLVS TMSGVTTSL
Sbjct: 181  EPYNAVLSIHQLLQNADACFCIDNEALYDICCRTLRLTTPTYGDLNHLVSLTMSGVTTSL 240

Query: 783  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMM 962
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTA+GSQQYRALTV ELTQQMFDA+N M
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTAQGSQQYRALTVAELTQQMFDARNTM 300

Query: 963  AACDPRHGRYLTVATVFRGPMSMKEVDEQMLAIQNKNSSYFVEWIPNNVKVAVCDIPPCG 1142
             ACDPR GRYLTVA +FRG MS KEVDEQ+L +Q +NSS FVEWIPNN+KVAVCDIPP G
Sbjct: 301  TACDPRRGRYLTVACIFRGQMSTKEVDEQLLTVQTRNSSCFVEWIPNNLKVAVCDIPPRG 360

Query: 1143 LKMAATFIGNSTAIXELFQRISEQFFGMFPRKAFLHWFTGEXMDEMEFTEAESNMNELVS 1322
            L MAATFIGNSTAI ELF R+SE F  MF RKAF+HW+TGE MD  EF EAES++ +LVS
Sbjct: 361  LSMAATFIGNSTAIQELFGRVSEHFSAMFKRKAFVHWYTGEGMDVSEFVEAESDIRDLVS 420

Query: 1323 DYQQYQ 1340
            +YQQ+Q
Sbjct: 421  EYQQFQ 426


>ref|XP_003355769.1| PREDICTED: tubulin beta-3 chain-like [Sus scrofa].
          Length = 378

 Score =  633 bits (1632), Expect = 0.0
 Identities = 310/354 (87%), Positives = 324/354 (91%)
 Frame = +3

Query: 279  MDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELMDSVLDVVRKESEHCDCLQG 458
            MDSVRSG FG LFRPDNFIFGQ+GAGNNWAKGHYTEGAEL+DSVLDVVRKE E+CDCLQG
Sbjct: 1    MDSVRSGAFGHLFRPDNFIFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKECENCDCLQG 60

Query: 459  FQXXXXXXXXXXXXXXXXXXXKIREEFPDRIMNTFSVMPSPKVSDTVVEPYNATLSVHQL 638
            FQ                   K+REE+PDRIMNTFSV+PSPKVSDTVVEPYNATLS+HQL
Sbjct: 61   FQLTHSLGGGTGSGMGTLLISKVREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSIHQL 120

Query: 639  VENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSLRFPGQLNADLRK 818
            VENTDETYCIDNEALYDICFRTLKL TPTYGDLNHLVSATMSGVTTSLRFPGQLNADLRK
Sbjct: 121  VENTDETYCIDNEALYDICFRTLKLATPTYGDLNHLVSATMSGVTTSLRFPGQLNADLRK 180

Query: 819  LAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLT 998
            LAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLT
Sbjct: 181  LAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLT 240

Query: 999  VATVFRGPMSMKEVDEQMLAIQNKNSSYFVEWIPNNVKVAVCDIPPCGLKMAATFIGNST 1178
            VATVFRG MSMKEVDEQMLAIQ+KNSSYFVEWIPNNVKVAVCDIPP GLKM++TFIGNST
Sbjct: 241  VATVFRGRMSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVCDIPPRGLKMSSTFIGNST 300

Query: 1179 AIXELFQRISEQFFGMFPRKAFLHWFTGEXMDEMEFTEAESNMNELVSDYQQYQ 1340
            AI ELF+RISEQF  MF RKAFLHW+TGE MDEMEFTEAESNMN+LVS+YQQYQ
Sbjct: 301  AIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 354


>ref|XP_003356396.1| PREDICTED: tubulin beta-6 chain-like, partial [Sus scrofa].
          Length = 366

 Score =  625 bits (1612), Expect = e-179
 Identities = 309/337 (91%), Positives = 312/337 (92%)
 Frame = +3

Query: 330  FIFGQTGAGNNWAKGHYTEGAELMDSVLDVVRKESEHCDCLQGFQXXXXXXXXXXXXXXX 509
            FI GQTGAGNNWAKGHYTEGAELMDSVLDVVRKESEHCDCLQGFQ               
Sbjct: 10   FIPGQTGAGNNWAKGHYTEGAELMDSVLDVVRKESEHCDCLQGFQLTHSLGGGTGSGMGT 69

Query: 510  XXXXKIREEFPDRIMNTFSVMPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYD 689
                KIREEFPDRIMNTFSVMPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYD
Sbjct: 70   LLISKIREEFPDRIMNTFSVMPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYD 129

Query: 690  ICFRTLKLTTPTYGDLNHLVSATMSGVTTSLRFPGQLNADLRKLAVNMVPFPRLHFFMPG 869
            ICFRTLKLTTPTYGDLNHLVSATMSGVTTSLRFPGQLNADLRKLAVNMVPFPRLHFFMPG
Sbjct: 130  ICFRTLKLTTPTYGDLNHLVSATMSGVTTSLRFPGQLNADLRKLAVNMVPFPRLHFFMPG 189

Query: 870  FAPLTARGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVATVFRGPMSMKEVDEQ 1049
            FAPLTARGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVATVFRGPMSMKEVDEQ
Sbjct: 190  FAPLTARGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVATVFRGPMSMKEVDEQ 249

Query: 1050 MLAIQNKNSSYFVEWIPNNVKVAVCDIPPCGLKMAATFIGNSTAIXELFQRISEQFFGMF 1229
            MLAIQNKNSSYFVEWIPNNVKVAVCDIPPCGLKMAATFIGNSTAI ELF+RISEQF  MF
Sbjct: 250  MLAIQNKNSSYFVEWIPNNVKVAVCDIPPCGLKMAATFIGNSTAIQELFKRISEQFSAMF 309

Query: 1230 PRKAFLHWFTGEXMDEMEFTEAESNMNELVSDYQQYQ 1340
             RKAFLHWFTGE MDEMEFTEAESNMN+LVS+YQQYQ
Sbjct: 310  RRKAFLHWFTGEGMDEMEFTEAESNMNDLVSEYQQYQ 346


>ref|XP_003356561.1| PREDICTED: tubulin beta-2A chain-like [Sus scrofa].
          Length = 416

 Score =  586 bits (1510), Expect(2) = e-179
 Identities = 288/332 (86%), Positives = 300/332 (90%)
 Frame = +3

Query: 345  TGAGNNWAKGHYTEGAELMDSVLDVVRKESEHCDCLQGFQXXXXXXXXXXXXXXXXXXXK 524
            +GAGNNWAKGHYTEGAEL+DSVLDVVRKESE CDCLQGFQ                   K
Sbjct: 66   SGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQLTHSLGGGTGSGMGTLLISK 125

Query: 525  IREEFPDRIMNTFSVMPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRT 704
            IREE+PDRIMNTFSVMPSPKVSDTVVEPYNATLSVHQLVENTDETY IDNEALYDICFRT
Sbjct: 126  IREEYPDRIMNTFSVMPSPKVSDTVVEPYNATLSVHQLVENTDETYSIDNEALYDICFRT 185

Query: 705  LKLTTPTYGDLNHLVSATMSGVTTSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT 884
            LKLTTPTYGDLNHLVSATMSGVTT LRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT
Sbjct: 186  LKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT 245

Query: 885  ARGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVATVFRGPMSMKEVDEQMLAIQ 1064
            +RGSQQYRALTVPELTQQMFD+KNMMAACDPRHGRYLTVA +FRG MSMKEVDEQML +Q
Sbjct: 246  SRGSQQYRALTVPELTQQMFDSKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQ 305

Query: 1065 NKNSSYFVEWIPNNVKVAVCDIPPCGLKMAATFIGNSTAIXELFQRISEQFFGMFPRKAF 1244
            NKNSSYFVEWIPNNVK AVCDIPP GLKM+ATFIGNSTAI ELF+RISEQF  MF RKAF
Sbjct: 306  NKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAF 365

Query: 1245 LHWFTGEXMDEMEFTEAESNMNELVSDYQQYQ 1340
            LHW+TGE MDEMEFTEAESNMN+LVS+YQQYQ
Sbjct: 366  LHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 397



 Score = 61.2 bits (147), Expect(2) = e-179
 Identities = 27/50 (54%), Positives = 30/50 (60%)
 Frame = +1

Query: 145 MASTRPAATWVTPRSNWRESTSTTMSHRLRNTCPGQPWWTWSRAPWTVCG 294
           MAST  A T  T   +WR ST TTM   + + CPG  WW WSRAPWT  G
Sbjct: 1   MASTPLAVTMATATCSWRGSTCTTMKPLVTSMCPGPSWWIWSRAPWTRSG 50


>ref|XP_003123158.2| PREDICTED: far upstream element-binding protein 2-like [Sus scrofa].
          Length = 930

 Score =  593 bits (1530), Expect = e-170
 Identities = 296/357 (82%), Positives = 313/357 (87%)
 Frame = +3

Query: 270  PGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELMDSVLDVVRKESEHCDC 449
            P   D  +S P    +   +F+ GQ+GAGNNWAKGHYTEGAEL+D+VLDVVRKE+E CDC
Sbjct: 557  PAPHDPSKSEPGQGRWGGASFL-GQSGAGNNWAKGHYTEGAELVDAVLDVVRKEAESCDC 615

Query: 450  LQGFQXXXXXXXXXXXXXXXXXXXKIREEFPDRIMNTFSVMPSPKVSDTVVEPYNATLSV 629
            LQGFQ                   KIREEFPDRIMNTFSV+PSPKVSDTVVEPYNATLSV
Sbjct: 616  LQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTFSVVPSPKVSDTVVEPYNATLSV 675

Query: 630  HQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSLRFPGQLNAD 809
            HQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT LRFPGQLNAD
Sbjct: 676  HQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNAD 735

Query: 810  LRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMMAACDPRHGR 989
            LRKLAVNMVPFPRLHFFMPGFAPLT+RGSQQYRALTVPELTQQMFDAKNMMAACDPRHGR
Sbjct: 736  LRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGR 795

Query: 990  YLTVATVFRGPMSMKEVDEQMLAIQNKNSSYFVEWIPNNVKVAVCDIPPCGLKMAATFIG 1169
            YLTVA VFRG MSMKEVDEQML++Q+KNSSYFVEWIPNNVK AVCDIPP GLKMAATFIG
Sbjct: 796  YLTVAAVFRGRMSMKEVDEQMLSVQSKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIG 855

Query: 1170 NSTAIXELFQRISEQFFGMFPRKAFLHWFTGEXMDEMEFTEAESNMNELVSDYQQYQ 1340
            NSTAI ELF+RISEQF  MF RKAFLHW+TGE MDEMEFTEAESNMN+LVS+YQQYQ
Sbjct: 856  NSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 912


>ref|XP_003355423.1| PREDICTED: tubulin alpha-1C chain isoform 1 [Sus scrofa].
          Length = 449

 Score =  339 bits (870), Expect = 2e-93
 Identities = 170/434 (39%), Positives = 252/434 (58%), Gaps = 10/434 (2%)
 Frame = +3

Query: 63   MREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGGYVGDSALQL--ERINVYYNESSSQK 236
            MRE + I  GQ G QIG   WE+   EHGI P G    D  +    +  N +++E+ + K
Sbjct: 1    MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60

Query: 237  YVPRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELMDSVLD 416
            +VPRA  VDLEP  +D VR+G + QLF P+  I G+  A NN+A+GHYT G E++D VLD
Sbjct: 61   HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 120

Query: 417  VVRKESEHCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEFPDRIMNTFSVMPSPKVSDT 596
             +RK ++ C  LQGF                    ++  ++  +    FS+ P+P+VS  
Sbjct: 121  RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 180

Query: 597  VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT 776
            VVEPYN+ L+ H  +E++D  + +DNEA+YDIC R L +  PTY +LN L+S  +S +T 
Sbjct: 181  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLMSQIVSSITA 240

Query: 777  SLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKN 956
            SLRF G LN DL +   N+VP+PR+HF +  +AP+ +     +  LTV E+T   F+  N
Sbjct: 241  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPAN 300

Query: 957  MMAACDPRHGRYLTVATVFRGPMSMKEVDEQMLAIQNKNSSYFVEWIPNNVKVAVCDIPP 1136
             M  CDPRHG+Y+    ++RG +  K+V+  +  I+ K S  FV+W P   KV +   PP
Sbjct: 301  QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPP 360

Query: 1137 --------CGLKMAATFIGNSTAIXELFQRISEQFFGMFPRKAFLHWFTGEXMDEMEFTE 1292
                      ++ A   + N+TAI E + R+  +F  M+ ++AF+HW+ GE M+E EF+E
Sbjct: 361  TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420

Query: 1293 AESNMNELVSDYQQ 1334
            A  +M  L  DY++
Sbjct: 421  AREDMAALEKDYEE 434


>ref|XP_001928233.1| PREDICTED: tubulin alpha-1D chain [Sus scrofa].
          Length = 452

 Score =  339 bits (869), Expect = 2e-93
 Identities = 169/434 (38%), Positives = 252/434 (58%), Gaps = 10/434 (2%)
 Frame = +3

Query: 63   MREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGGYVGDSALQL--ERINVYYNESSSQK 236
            MRE + +  GQ G QIG   WE+   EHGI P G    D  +    +  N +++E+ + K
Sbjct: 1    MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60

Query: 237  YVPRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELMDSVLD 416
            +VPRA  VDLEP  +D VR+G + QLF P+  I G+  A NN+A+GHYT G EL+D VLD
Sbjct: 61   HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKELIDLVLD 120

Query: 417  VVRKESEHCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEFPDRIMNTFSVMPSPKVSDT 596
             +RK ++ C  LQGF                    ++  ++  +    FS+ P+P+VS  
Sbjct: 121  RIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 180

Query: 597  VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT 776
            VVEPYN+ L+ H  +E++D  + +DNEA+YDIC R L +  PTY +LN L+   +S +T 
Sbjct: 181  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 240

Query: 777  SLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKN 956
            SLRF G LN DL +   N+VP+PR+HF +  +AP+ +     +  L+V E+T   F+  N
Sbjct: 241  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 300

Query: 957  MMAACDPRHGRYLTVATVFRGPMSMKEVDEQMLAIQNKNSSYFVEWIPNNVKVAVCDIPP 1136
             M  CDPRHG+Y+    ++RG +  K+V+  + AI+ K S  FV+W P   KV +   PP
Sbjct: 301  QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAAIKTKRSIQFVDWCPTGFKVGINYQPP 360

Query: 1137 --------CGLKMAATFIGNSTAIXELFQRISEQFFGMFPRKAFLHWFTGEXMDEMEFTE 1292
                      ++ A   + N+TAI E + R+  +F  M+ ++AF+HW+ GE M+E EF+E
Sbjct: 361  TVVPRGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420

Query: 1293 AESNMNELVSDYQQ 1334
            A  +M  L  DY++
Sbjct: 421  AREDMAALEKDYEE 434


  Database: RefSeq49_SP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 11,343,932
  Number of sequences in database:  24,897
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 34,054,983
Number of extensions: 985065
Number of successful extensions: 4463
Number of sequences better than 1.0e-05: 30
Number of HSP's gapped: 4381
Number of HSP's successfully gapped: 32
Length of query: 446
Length of database: 11,343,932
Length adjustment: 102
Effective length of query: 344
Effective length of database: 8,804,438
Effective search space: 3028726672
Effective search space used: 3028726672
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-006969
         (1340 letters)

Database: Sscrofa_10.2.fasta 
           4582 sequences; 2,808,509,378 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Sscrofa_Chr06                                                        1879   0.0  
Sscrofa_Chr07                                                        1243   0.0  
Sscrofa_Chr01                                                        1199   0.0  
Sscrofa_Chr02                                                        1168   0.0  
Sscrofa_Chr17                                                         712   0.0  
gb|GL895527.2| Sus scrofa unplaced genomic scaffold ChrUScaf3411      500   e-138

>Sscrofa_Chr06 
||          Length = 157765593

 Score = 1879 bits (948), Expect = 0.0
 Identities = 988/1002 (98%)
 Strand = Plus / Plus

                                                                            
Query: 339      ggacagactggtgctggcaacaactgggccaagggccactacacggagggtgcggagctg 398
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90812901 ggacagactggtgctggcaacaactgggccaagggccactacacggagggtgcggagctg 90812960

                                                                            
Query: 399      atggactcagtcctggatgtggtgcggaaggagagcgagcactgcgactgcctgcagggc 458
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90812961 atggactcagtcctggatgtggtgcggaaggagagcgagcactgcgactgcctgcagggc 90813020

                                                                            
Query: 459      ttccagctcacccactcgctgggcggtggcacaggctccgggatgggcaccttgctcatc 518
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90813021 ttccagctcacccactcgctgggcggtggcacaggctccgggatgggcaccttgctcatc 90813080

                                                                            
Query: 519      agcaagatccgagaggagttccctgatcgcatcatgaacaccttcagcgtcatgccctca 578
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90813081 agcaagatccgagaggagttccctgatcgcatcatgaacaccttcagcgtcatgccctca 90813140

                                                                            
Query: 579      cccaaggtgtcagacacggtggtcgagccctacaacgccacgctgtccgtgcaccagctg 638
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90813141 cccaaggtgtcagacacggtggtcgagccctacaacgccacgctgtccgtgcaccagctg 90813200

                                                                            
Query: 639      gtggagaacacggatgagacctactgcatcgacaacgaggccctgtatgacatctgcttc 698
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90813201 gtggagaacacggatgagacctactgcatcgacaacgaggccctgtatgacatctgcttc 90813260

                                                                            
Query: 699      cgcaccctgaagctgaccacgcctacctacggggacctcaaccacctggtgtcggccacc 758
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90813261 cgcaccctgaagctgaccacgcctacctacggggacctcaaccacctggtgtcggccacc 90813320

                                                                            
Query: 759      atgagtggggtcaccacctccctgcgctttccaggccagctcaacgctgacctgcgcaag 818
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90813321 atgagtggggtcaccacctccctgcgctttccaggccagctcaacgctgacctgcgcaag 90813380

                                                                            
Query: 819      ctggctgtgaacatggtccccttcccacgcctgcacttcttcatgcccggcttcgcgccg 878
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90813381 ctggctgtgaacatggtccccttcccacgcctgcacttcttcatgcccggcttcgcgccg 90813440

                                                                            
Query: 879      ctaaccgcccggggcagccagcagtaccgcgccctgacagtgccagagctcacccagcag 938
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90813441 ctaaccgcccggggcagccagcagtaccgcgccctgacagtgccagagctcacccagcag 90813500

                                                                            
Query: 939      atgttcgatgccaagaacatgatggccgcctgcgaccctcgccacggccgctacctgacc 998
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90813501 atgttcgatgccaagaacatgatggccgcctgcgaccctcgccacggccgctacctgacc 90813560

                                                                            
Query: 999      gtggccactgtcttcaggggccccatgtccatgaaggaggtggacgagcagatgctggcc 1058
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90813561 gtggccactgtcttcaggggccccatgtccatgaaggaggtggacgagcagatgctggcc 90813620

                                                                            
Query: 1059     atccagaacaagaacagcagctacttcgtggagtggatccccaacaatgtgaaggtggcc 1118
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90813621 atccagaacaagaacagcagctacttcgtggagtggatccccaacaatgtgaaggtggcc 90813680

                                                                            
Query: 1119     gtgtgcgacatcccgccatgtggcctgaagatggctgccaccttcattggcaacagcaca 1178
                ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 90813681 gtgtgcgacatcccgccatgtggcctgaagatggctgccaccttcatcggcaacagcaca 90813740

                                                                            
Query: 1179     gccatccangagctgtttcagcgcatctcagagcagttcttcggcatgttcccgcgcaag 1238
                |||||||| ||||||||  |||||||||||||||||||||  | |||||| | |||||||
Sbjct: 90813741 gccatccaggagctgttcaagcgcatctcagagcagttctcggccatgtttcggcgcaag 90813800

                                                                            
Query: 1239     gccttcctgcactggttcacgggcgaggncatggacgaaatggagttcaccgaggctgaa 1298
                |||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| 
Sbjct: 90813801 gccttcctgcactggttcacgggcgagggcatggacgagatggagttcaccgaggctgag 90813860

                                                          
Query: 1299     agcaacatgaacgaactggtgtccgattaccagcagtaccag 1340
                |||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 90813861 agcaacatgaacgacctggtgtccgagtaccagcagtaccag 90813902



 Score = 1358 bits (685), Expect = 0.0
 Identities = 920/999 (92%)
 Strand = Plus / Plus

                                                                          
Query: 342    cagactggtgctggcaacaactgggccaagggccactacacggagggtgcggagctgatg 401
              |||| ||| |||||||||||||||||||| || |||||||||||||| ||||||||| ||
Sbjct: 267334 cagagtggggctggcaacaactgggccaaaggtcactacacggagggcgcggagctggtg 267393

                                                                          
Query: 402    gactcagtcctggatgtggtgcggaaggagagcgagcactgcgactgcctgcagggcttc 461
              ||||| |||||||| ||||||||||||||| | ||| | |||||||||||||||||||||
Sbjct: 267394 gactcggtcctggacgtggtgcggaaggagtgtgagaattgcgactgcctgcagggcttc 267453

                                                                          
Query: 462    cagctcacccactcgctgggcggtggcacaggctccgggatgggcaccttgctcatcagc 521
              |||||||||||||| ||||| || ||||| |||||||||||||||||| |||||||||||
Sbjct: 267454 cagctcacccactctctggggggcggcacgggctccgggatgggcaccctgctcatcagc 267513

                                                                          
Query: 522    aagatccgagaggagttccctgatcgcatcatgaacaccttcagcgtcatgccctcaccc 581
              ||| |||| ||||||| |||||| |||||||||||||||||||||||  ||||||| |||
Sbjct: 267514 aaggtccgcgaggagtaccctgaccgcatcatgaacaccttcagcgtggtgccctcgccc 267573

                                                                          
Query: 582    aaggtgtcagacacggtggtcgagccctacaacgccacgctgtccgtgcaccagctggtg 641
              |||||||| |||||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 267574 aaggtgtcggacacggtggtcgagccctacaacgccacgctgtccatccaccagctggtg 267633

                                                                          
Query: 642    gagaacacggatgagacctactgcatcgacaacgaggccctgtatgacatctgcttccgc 701
              ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 267634 gagaacacggacgagacctactgcatcgacaacgaggccctgtacgacatctgcttccgc 267693

                                                                          
Query: 702    accctgaagctgaccacgcctacctacggggacctcaaccacctggtgtcggccaccatg 761
              ||||| |||||| ||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 267694 accctcaagctggccacgcccacctacggggacctcaaccacctggtgtcggccaccatg 267753

                                                                          
Query: 762    agtggggtcaccacctccctgcgctttccaggccagctcaacgctgacctgcgcaagctg 821
              || ||||||||||||||||||||||| || |||||||||||||| |||||||||||||||
Sbjct: 267754 agcggggtcaccacctccctgcgcttcccgggccagctcaacgccgacctgcgcaagctg 267813

                                                                          
Query: 822    gctgtgaacatggtccccttcccacgcctgcacttcttcatgcccggcttcgcgccgcta 881
              || ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| 
Sbjct: 267814 gccgtgaacatggtgcccttcccgcgcctgcacttcttcatgcccggcttcgcgccgctc 267873

                                                                          
Query: 882    accgcccggggcagccagcagtaccgcgccctgacagtgccagagctcacccagcagatg 941
              || |||||||||||||||||||||||||| ||||| ||||| |||||||| |||||||||
Sbjct: 267874 actgcccggggcagccagcagtaccgcgcgctgacggtgcccgagctcacgcagcagatg 267933

                                                                          
Query: 942    ttcgatgccaagaacatgatggccgcctgcgaccctcgccacggccgctacctgaccgtg 1001
              ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 267934 ttcgacgccaagaacatgatggccgcctgcgacccgcgccacggccgctacctgaccgtg 267993

                                                                          
Query: 1002   gccactgtcttcaggggccccatgtccatgaaggaggtggacgagcagatgctggccatc 1061
              ||||| |||||| | || | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 267994 gccaccgtcttccgagggcgcatgtccatgaaggaggtggacgagcagatgctggccatc 268053

                                                                          
Query: 1062   cagaacaagaacagcagctacttcgtggagtggatccccaacaatgtgaaggtggccgtg 1121
              |||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 268054 cagagcaagaacagcagctacttcgtggagtggatccccaacaacgtgaaggtggccgtg 268113

                                                                          
Query: 1122   tgcgacatcccgccatgtggcctgaagatggctgccaccttcattggcaacagcacagcc 1181
              ||||||||||||||  | ||||| |||||| |  |||||||||| ||||||||||| |||
Sbjct: 268114 tgcgacatcccgccgcgcggcctcaagatgtcctccaccttcatcggcaacagcacggcc 268173

                                                                          
Query: 1182   atccangagctgtttcagcgcatctcagagcagttcttcggcatgttcccgcgcaaggcc 1241
              ||||| ||||||||  |||||||||| |||||||||   | |||||||| ||||||||||
Sbjct: 268174 atccaggagctgttcaagcgcatctcggagcagttcacggccatgttccggcgcaaggcc 268233

                                                                          
Query: 1242   ttcctgcactggttcacgggcgaggncatggacgaaatggagttcaccgaggctgaaagc 1301
              ||||||||||||| ||||||||||| ||||||||| ||||||||||||||||| || |||
Sbjct: 268234 ttcctgcactggtacacgggcgagggcatggacgagatggagttcaccgaggccgagagc 268293

                                                     
Query: 1302   aacatgaacgaactggtgtccgattaccagcagtaccag 1340
              ||||||||||| ||||||||||| |||||||||||||||
Sbjct: 268294 aacatgaacgacctggtgtccgagtaccagcagtaccag 268332



 Score =  222 bits (112), Expect = 4e-55
 Identities = 112/112 (100%)
 Strand = Plus / Plus

                                                                            
Query: 229      ctcagaaatacgtgcccagggcagccctggtggacttggagccgggcaccatggacagtg 288
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90810048 ctcagaaatacgtgcccagggcagccctggtggacttggagccgggcaccatggacagtg 90810107

                                                                    
Query: 289      tgcggtccgggccttttgggcagctcttccggccggacaacttcatcttcgg 340
                ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90810108 tgcggtccgggccttttgggcagctcttccggccggacaacttcatcttcgg 90810159



 Score =  220 bits (111), Expect = 2e-54
 Identities = 111/111 (100%)
 Strand = Plus / Plus

                                                                            
Query: 118      agttttgggaagtgattagcgatgaacatggcatcgacccggccggcggctacgtgggtg 177
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90808457 agttttgggaagtgattagcgatgaacatggcatcgacccggccggcggctacgtgggtg 90808516

                                                                   
Query: 178      actccgcgctccaactggagagaatcaacgtctactacaatgagtcatcgt 228
                |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90808517 actccgcgctccaactggagagaatcaacgtctactacaatgagtcatcgt 90808567



 Score = 77.8 bits (39), Expect = 1e-11
 Identities = 48/51 (94%)
 Strand = Plus / Plus

                                                                 
Query: 62     catgagggagatcgtgcacatccaggcgggccagtgcgggaatcagatcgg 112
              ||||||||||||||||||||||||||| ||||||||||| || ||||||||
Sbjct: 259477 catgagggagatcgtgcacatccaggccggccagtgcggcaaccagatcgg 259527



 Score = 77.8 bits (39), Expect = 1e-11
 Identities = 75/87 (86%)
 Strand = Plus / Plus

                                                                          
Query: 254    cctggtggacttggagccgggcaccatggacagtgtgcggtccgggccttttgggcagct 313
              |||||||||| |||||||||| ||||||||||| || || || ||| | || ||||| ||
Sbjct: 266502 cctggtggacctggagccggggaccatggacagcgtccgttctggggccttcgggcacct 266561

                                         
Query: 314    cttccggccggacaacttcatcttcgg 340
              |||| |||| |||||||||||||||||
Sbjct: 266562 cttcaggcctgacaacttcatcttcgg 266588


>Sscrofa_Chr07 
||          Length = 134764511

 Score = 1243 bits (627), Expect = 0.0
 Identities = 901/993 (90%)
 Strand = Plus / Minus

                                                                           
Query: 348     ggtgctggcaacaactgggccaagggccactacacggagggtgcggagctgatggactca 407
               ||||| ||||||||||||||||||||||||||||||||||| || |||||| ||||||| 
Sbjct: 1976320 ggtgccggcaacaactgggccaagggccactacacggagggcgccgagctggtggactcg 1976261

                                                                           
Query: 408     gtcctggatgtggtgcggaaggagagcgagcactgcgactgcctgcagggcttccagctc 467
               |||||||| |||||  ||||||||   |||  ||| ||||| ||||||||||||||||| 
Sbjct: 1976260 gtcctggacgtggtcaggaaggagtcagagagctgtgactgtctgcagggcttccagctg 1976201

                                                                           
Query: 468     acccactcgctgggcggtggcacaggctccgggatgggcaccttgctcatcagcaagatc 527
               |||||||||||||| || ||||| |||||||||||||||||| ||||||| |||||||||
Sbjct: 1976200 acccactcgctggggggcggcacgggctccgggatgggcaccctgctcattagcaagatc 1976141

                                                                           
Query: 528     cgagaggagttccctgatcgcatcatgaacaccttcagcgtcatgccctcacccaaggtg 587
               || ||||||| ||| || ||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 1976140 cgcgaggagtaccccgaccgcatcatgaacaccttcagcgtcatgccctcacccaaggtc 1976081

                                                                           
Query: 588     tcagacacggtggtcgagccctacaacgccacgctgtccgtgcaccagctggtggagaac 647
               || ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct: 1976080 tcggacacggtggtcgagccctacaacgccaccctctccgtgcaccagctggtggagaac 1976021

                                                                           
Query: 648     acggatgagacctactgcatcgacaacgaggccctgtatgacatctgcttccgcaccctg 707
               |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1976020 acggatgagacctactccatcgacaacgaggccctgtacgacatctgcttccgcaccctg 1975961

                                                                           
Query: 708     aagctgaccacgcctacctacggggacctcaaccacctggtgtcggccaccatgagtggg 767
               |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1975960 aagctgaccacgcccacctacggggacctcaaccacctggtgtcggccaccatgagcggg 1975901

                                                                           
Query: 768     gtcaccacctccctgcgctttccaggccagctcaacgctgacctgcgcaagctggctgtg 827
               |||||||| | ||||||||| || |||||||||||||| ||||||||||||||||| |||
Sbjct: 1975900 gtcaccacgtgcctgcgcttcccgggccagctcaacgccgacctgcgcaagctggccgtg 1975841

                                                                           
Query: 828     aacatggtccccttcccacgcctgcacttcttcatgcccggcttcgcgccgctaaccgcc 887
               |||||||| |||||||| ||||||||||||||||||||||||||||||||||| |||  |
Sbjct: 1975840 aacatggtgcccttcccgcgcctgcacttcttcatgcccggcttcgcgccgctgaccagc 1975781

                                                                           
Query: 888     cggggcagccagcagtaccgcgccctgacagtgccagagctcacccagcagatgttcgat 947
               || |||||||||||||||||||| ||||| ||||| |||||||| |||||||||||||| 
Sbjct: 1975780 cgcggcagccagcagtaccgcgcgctgacggtgcccgagctcacgcagcagatgttcgac 1975721

                                                                           
Query: 948     gccaagaacatgatggccgcctgcgaccctcgccacggccgctacctgaccgtggccact 1007
                |||||||||||||||||||||||||||| |||||||||||||||||||| |||||| | 
Sbjct: 1975720 tccaagaacatgatggccgcctgcgacccgcgccacggccgctacctgacggtggccgcc 1975661

                                                                           
Query: 1008    gtcttcaggggccccatgtccatgaaggaggtggacgagcagatgctggccatccagaac 1067
                ||||| | |||| |||||||||||||||||||||||||||||||||   | | ||||||
Sbjct: 1975660 atcttccgcggccgcatgtccatgaaggaggtggacgagcagatgctcaacgtgcagaac 1975601

                                                                           
Query: 1068    aagaacagcagctacttcgtggagtggatccccaacaatgtgaaggtggccgtgtgcgac 1127
               |||||||||||||||||||||||||||||||||||||| || |||  |||||||||||||
Sbjct: 1975600 aagaacagcagctacttcgtggagtggatccccaacaacgtcaagacggccgtgtgcgac 1975541

                                                                           
Query: 1128    atcccgccatgtggcctgaagatggctgccaccttcattggcaacagcacagccatccan 1187
               ||||||||  | ||||| |||||| | ||||||||||| ||||||||||| |||||||| 
Sbjct: 1975540 atcccgccgcgcggcctcaagatgtcggccaccttcatcggcaacagcacggccatccag 1975481

                                                                           
Query: 1188    gagctgtttcagcgcatctcagagcagttcttcggcatgttcccgcgcaaggccttcctg 1247
               ||||||||  |||||||||| |||||||||   | |||||||| ||||||||||||||||
Sbjct: 1975480 gagctgttcaagcgcatctcggagcagttcacggccatgttccggcgcaaggccttcctg 1975421

                                                                           
Query: 1248    cactggttcacgggcgaggncatggacgaaatggagttcaccgaggctgaaagcaacatg 1307
               ||||||| ||||||||||| ||||||||| ||||||||||||||||| || |||||||||
Sbjct: 1975420 cactggtacacgggcgagggcatggacgagatggagttcaccgaggccgagagcaacatg 1975361

                                                
Query: 1308    aacgaactggtgtccgattaccagcagtaccag 1340
               ||||| ||||||||||| |||||||||||||||
Sbjct: 1975360 aacgacctggtgtccgagtaccagcagtaccag 1975328



 Score = 1219 bits (615), Expect = 0.0
 Identities = 898/993 (90%)
 Strand = Plus / Minus

                                                                           
Query: 348     ggtgctggcaacaactgggccaagggccactacacggagggtgcggagctgatggactca 407
               ||||| ||||||||||||||||||||||||||||| ||||| || |||||| ||||||| 
Sbjct: 2014802 ggtgccggcaacaactgggccaagggccactacacagagggcgccgagctggtggactcg 2014743

                                                                           
Query: 408     gtcctggatgtggtgcggaaggagagcgagcactgcgactgcctgcagggcttccagctc 467
               |||||||| |||||  ||||||||   |||  ||| ||||| ||||||||||||||||| 
Sbjct: 2014742 gtcctggacgtggtcaggaaggagtcagagagctgtgactgtctgcagggcttccagctg 2014683

                                                                           
Query: 468     acccactcgctgggcggtggcacaggctccgggatgggcaccttgctcatcagcaagatc 527
               |||||||||||||| || ||||| || || |||||||||||| |||||||||||||||||
Sbjct: 2014682 acccactcgctggggggcggcacgggttcggggatgggcaccctgctcatcagcaagatc 2014623

                                                                           
Query: 528     cgagaggagttccctgatcgcatcatgaacaccttcagcgtcatgccctcacccaaggtg 587
               || ||||||| ||| || |||||||||||||||||||||||||||||||| |||||||| 
Sbjct: 2014622 cgcgaggagtaccccgaccgcatcatgaacaccttcagcgtcatgccctcgcccaaggtc 2014563

                                                                           
Query: 588     tcagacacggtggtcgagccctacaacgccacgctgtccgtgcaccagctggtggagaac 647
               || ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct: 2014562 tcggacacggtggtcgagccctacaacgccaccctctccgtgcaccagctggtggagaac 2014503

                                                                           
Query: 648     acggatgagacctactgcatcgacaacgaggccctgtatgacatctgcttccgcaccctg 707
               |||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 2014502 acggatgagacctattgcatcgacaacgaggccctgtacgacatctgcttccgcaccctg 2014443

                                                                           
Query: 708     aagctgaccacgcctacctacggggacctcaaccacctggtgtcggccaccatgagtggg 767
               |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 2014442 aagctgaccacgcccacctacggggacctcaaccacctggtgtcggccaccatgagcggg 2014383

                                                                           
Query: 768     gtcaccacctccctgcgctttccaggccagctcaacgctgacctgcgcaagctggctgtg 827
               |||||||| | ||||||||| || |||||||||||||| ||||||||||||||||| |||
Sbjct: 2014382 gtcaccacgtgcctgcgcttcccgggccagctcaacgccgacctgcgcaagctggccgtg 2014323

                                                                           
Query: 828     aacatggtccccttcccacgcctgcacttcttcatgcccggcttcgcgccgctaaccgcc 887
               |||||||| |||||||| ||||||||||||||||||||||||||||||||||| |||  |
Sbjct: 2014322 aacatggtgcccttcccgcgcctgcacttcttcatgcccggcttcgcgccgctgaccagc 2014263

                                                                           
Query: 888     cggggcagccagcagtaccgcgccctgacagtgccagagctcacccagcagatgttcgat 947
               || |||||||||||||||||||| ||||| ||||| |||||||| |||||||||||||| 
Sbjct: 2014262 cgcggcagccagcagtaccgcgcgctgacggtgcccgagctcacgcagcagatgttcgac 2014203

                                                                           
Query: 948     gccaagaacatgatggccgcctgcgaccctcgccacggccgctacctgaccgtggccact 1007
                |||||||||||||||||||||||||||| |||||||||||||||||||| |||||| | 
Sbjct: 2014202 tccaagaacatgatggccgcctgcgacccgcgccacggccgctacctgacggtggccgcc 2014143

                                                                           
Query: 1008    gtcttcaggggccccatgtccatgaaggaggtggacgagcagatgctggccatccagaac 1067
                ||||| | |||| |||||||||||||||||||||||||||||||||   | | ||||||
Sbjct: 2014142 atcttccgcggccgcatgtccatgaaggaggtggacgagcagatgctcaacgtgcagaac 2014083

                                                                           
Query: 1068    aagaacagcagctacttcgtggagtggatccccaacaatgtgaaggtggccgtgtgcgac 1127
               |||||||||||||||||||||||||||||||||||||| || |||  |||||||||||||
Sbjct: 2014082 aagaacagcagctacttcgtggagtggatccccaacaacgtcaagacggccgtgtgcgac 2014023

                                                                           
Query: 1128    atcccgccatgtggcctgaagatggctgccaccttcattggcaacagcacagccatccan 1187
               ||||||||  | ||||| |||||| | ||||||||||| ||||||||||| |||||||| 
Sbjct: 2014022 atcccgccgcgcggcctcaagatgtcggccaccttcatcggcaacagcacggccatccag 2013963

                                                                           
Query: 1188    gagctgtttcagcgcatctcagagcagttcttcggcatgttcccgcgcaaggccttcctg 1247
               ||||||||  |||||||||| |||||||||   | |||||||| ||||||||||||||||
Sbjct: 2013962 gagctgttcaagcgcatctcggagcagttcacggccatgttccggcgcaaggccttcctg 2013903

                                                                           
Query: 1248    cactggttcacgggcgaggncatggacgaaatggagttcaccgaggctgaaagcaacatg 1307
               ||||||| ||||||||||| ||||||||| ||||||||||||||||| || |||||||||
Sbjct: 2013902 cactggtacacgggcgagggcatggacgagatggagttcaccgaggccgagagcaacatg 2013843

                                                
Query: 1308    aacgaactggtgtccgattaccagcagtaccag 1340
               ||||| ||||||||||| |||||||||||||||
Sbjct: 2013842 aacgacctggtgtccgagtaccagcagtaccag 2013810



 Score =  858 bits (433), Expect = 0.0
 Identities = 848/987 (85%)
 Strand = Plus / Plus

                                                                            
Query: 354      ggcaacaactgggccaagggccactacacggagggtgcggagctgatggactcagtcctg 413
                |||||||||||||||||||||||||| || || || || |||||| | ||||||||||||
Sbjct: 26972213 ggcaacaactgggccaagggccactatacagaaggggctgagctggttgactcagtcctg 26972272

                                                                            
Query: 414      gatgtggtgcggaaggagagcgagcactgcgactgcctgcagggcttccagctcacccac 473
                |||||||| |||||||||   |||  ||| |||||||| |||||||||||||| ||||||
Sbjct: 26972273 gatgtggttcggaaggaggctgagagctgtgactgccttcagggcttccagctgacccac 26972332

                                                                            
Query: 474      tcgctgggcggtggcacaggctccgggatgggcaccttgctcatcagcaagatccgagag 533
                ||||||||||||||||||||||| || |||||||| |||||||||||||||||||| || 
Sbjct: 26972333 tcgctgggcggtggcacaggctctggaatgggcactttgctcatcagcaagatccgtgaa 26972392

                                                                            
Query: 534      gagttccctgatcgcatcatgaacaccttcagcgtcatgccctcacccaaggtgtcagac 593
                || |  || || ||||||||||| |||||||| ||| ||||||||||||| ||||| |||
Sbjct: 26972393 gaatatcccgaccgcatcatgaataccttcagtgtcgtgccctcacccaaagtgtctgac 26972452

                                                                            
Query: 594      acggtggtcgagccctacaacgccacgctgtccgtgcaccagctggtggagaacacggat 653
                || ||||| ||||||||||||||||| || || || || ||| ||||||||||||| |||
Sbjct: 26972453 accgtggttgagccctacaacgccaccctctctgtccatcagttggtggagaacactgat 26972512

                                                                            
Query: 654      gagacctactgcatcgacaacgaggccctgtatgacatctgcttccgcaccctgaagctg 713
                |||||||||||||||||||| |||||||| || ||||||||||||||||| || ||||||
Sbjct: 26972513 gagacctactgcatcgacaatgaggccctttacgacatctgcttccgcactctcaagctg 26972572

                                                                            
Query: 714      accacgcctacctacggggacctcaaccacctggtgtcggccaccatgagtggggtcacc 773
                |||||||| ||||| |||||||| |||||||| || || |||||||||||||| ||||||
Sbjct: 26972573 accacgccaacctatggggacctgaaccaccttgtctctgccaccatgagtggtgtcacc 26972632

                                                                            
Query: 774      acctccctgcgctttccaggccagctcaacgctgacctgcgcaagctggctgtgaacatg 833
                |||| ||| ||||| || ||||||||||| |||||||| ||||||||||| || || |||
Sbjct: 26972633 acctgcctccgcttccctggccagctcaatgctgacctccgcaagctggcagtcaatatg 26972692

                                                                            
Query: 834      gtccccttcccacgcctgcacttcttcatgcccggcttcgcgccgctaaccgcccggggc 893
                || ||||||||||| || |||||||||||||||||||| || || || |||  ||| || 
Sbjct: 26972693 gtgcccttcccacgtctccacttcttcatgcccggctttgcccctctgaccagccgtgga 26972752

                                                                            
Query: 894      agccagcagtaccgcgccctgacagtgccagagctcacccagcagatgttcgatgccaag 953
                |||||||||||||| ||||| || ||||| ||||||||||||||| | ||||||||||||
Sbjct: 26972753 agccagcagtaccgggccctcactgtgcctgagctcacccagcaggtcttcgatgccaag 26972812

                                                                            
Query: 954      aacatgatggccgcctgcgaccctcgccacggccgctacctgaccgtggccactgtcttc 1013
                ||||||||||| ||||| ||||| ||||| ||||| ||||| || |||||  ||||||||
Sbjct: 26972813 aacatgatggctgcctgtgacccccgccatggccggtacctcactgtggctgctgtcttc 26972872

                                                                            
Query: 1014     aggggccccatgtccatgaaggaggtggacgagcagatgctggccatccagaacaagaac 1073
                 | || | ||||||||||||||||||||| |||||||||||   | | ||||||||||| 
Sbjct: 26972873 cgtgggcgcatgtccatgaaggaggtggatgagcagatgctcaacgtgcagaacaagaat 26972932

                                                                            
Query: 1074     agcagctacttcgtggagtggatccccaacaatgtgaaggtggccgtgtgcgacatcccg 1133
                |||||||||||||| || ||||||||||||||||| |||  ||| || ||||| ||||| 
Sbjct: 26972933 agcagctacttcgtagaatggatccccaacaatgtcaagacggctgtctgcgatatccct 26972992

                                                                            
Query: 1134     ccatgtggcctgaagatggctgccaccttcattggcaacagcacagccatccangagctg 1193
                ||  ||||||| |||||||| | ||||||||| ||||||||||| |||||||| ||||| 
Sbjct: 26972993 ccccgtggcctcaagatggcggtcaccttcatcggcaacagcacggccatccaggagcta 26973052

                                                                            
Query: 1194     tttcagcgcatctcagagcagttcttcggcatgttcccgcgcaaggccttcctgcactgg 1253
                ||  ||||||||||||||||||||   | ||||||||  || ||||||||||| ||||||
Sbjct: 26973053 ttcaagcgcatctcagagcagttcactgccatgttccgccgaaaggccttcctccactgg 26973112

                                                                            
Query: 1254     ttcacgggcgaggncatggacgaaatggagttcaccgaggctgaaagcaacatgaacgaa 1313
                | ||| || |||| ||||||||| ||||||||||| |||||||| ||||||||||| || 
Sbjct: 26973113 tacacaggtgagggcatggacgagatggagttcactgaggctgagagcaacatgaatgac 26973172

                                           
Query: 1314     ctggtgtccgattaccagcagtaccag 1340
                || || || || |||||||||||||||
Sbjct: 26973173 ctcgtctctgagtaccagcagtaccag 26973199



 Score = 85.7 bits (43), Expect = 6e-14
 Identities = 49/51 (96%)
 Strand = Plus / Minus

                                                                  
Query: 69      gagatcgtgcacatccaggcgggccagtgcgggaatcagatcggcaccaag 119
               |||||||||||||||||||||||||||||||| |||||||||||| |||||
Sbjct: 2016469 gagatcgtgcacatccaggcgggccagtgcggcaatcagatcggcgccaag 2016419



 Score = 77.8 bits (39), Expect = 1e-11
 Identities = 48/51 (94%)
 Strand = Plus / Minus

                                                                  
Query: 69      gagatcgtgcacatccaggcgggccagtgcgggaatcagatcggcaccaag 119
               |||||||||||||||||||||||||||||||| || ||||||||| |||||
Sbjct: 1978413 gagatcgtgcacatccaggcgggccagtgcggcaaccagatcggcgccaag 1978363


>Sscrofa_Chr01 
||          Length = 315321322

 Score = 1199 bits (605), Expect = 0.0
 Identities = 900/999 (90%)
 Strand = Plus / Minus

                                                                             
Query: 342       cagactggtgctggcaacaactgggccaagggccactacacggagggtgcggagctgatg 401
                 |||| |||||| || ||||||||||||||||| |||||||| || || || |||||  | 
Sbjct: 314136552 cagagtggtgccgggaacaactgggccaaggggcactacacagaaggcgcagagcttgtc 314136493

                                                                             
Query: 402       gactcagtcctggatgtggtgcggaaggagagcgagcactgcgactgcctgcagggcttc 461
                 ||||| || |||||||| ||| ||||||||   |||  ||| ||||||||||||||||||
Sbjct: 314136492 gactcggtgctggatgtcgtgaggaaggaggcggagagctgtgactgcctgcagggcttc 314136433

                                                                             
Query: 462       cagctcacccactcgctgggcggtggcacaggctccgggatgggcaccttgctcatcagc 521
                 ||||| |||||||||||||| || || || || || |||||||||||| |||||||||||
Sbjct: 314136432 cagctgacccactcgctgggtggggggaccgggtctgggatgggcaccctgctcatcagc 314136373

                                                                             
Query: 522       aagatccgagaggagttccctgatcgcatcatgaacaccttcagcgtcatgccctcaccc 581
                 |||||||| ||||||| ||| || |||||||||||||||||||||||  ||||||| |||
Sbjct: 314136372 aagatccgggaggagtaccccgaccgcatcatgaacaccttcagcgtggtgccctcgccc 314136313

                                                                             
Query: 582       aaggtgtcagacacggtggtcgagccctacaacgccacgctgtccgtgcaccagctggtg 641
                 |||||||| ||||||||||| ||||||||||||||||| || ||||||||||||||||||
Sbjct: 314136312 aaggtgtcggacacggtggtggagccctacaacgccaccctctccgtgcaccagctggtg 314136253

                                                                             
Query: 642       gagaacacggatgagacctactgcatcgacaacgaggccctgtatgacatctgcttccgc 701
                 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 314136252 gagaacacggatgagacctactgcatcgacaacgaggccctgtacgacatctgcttccgc 314136193

                                                                             
Query: 702       accctgaagctgaccacgcctacctacggggacctcaaccacctggtgtcggccaccatg 761
                 |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 314136192 accctgaagctgaccacgcccacctacggggacctcaaccacctggtgtcggccaccatg 314136133

                                                                             
Query: 762       agtggggtcaccacctccctgcgctttccaggccagctcaacgctgacctgcgcaagctg 821
                 || ||||||||||||| ||||||||| || |||||||||||||| || ||||||||||||
Sbjct: 314136132 agcggggtcaccacctgcctgcgcttccccggccagctcaacgccgatctgcgcaagctg 314136073

                                                                             
Query: 822       gctgtgaacatggtccccttcccacgcctgcacttcttcatgcccggcttcgcgccgcta 881
                 |||||||||||||| |||||||| |||||||||||||||||||| |||||||||||||| 
Sbjct: 314136072 gctgtgaacatggtgcccttcccgcgcctgcacttcttcatgcctggcttcgcgccgctg 314136013

                                                                             
Query: 882       accgcccggggcagccagcagtaccgcgccctgacagtgccagagctcacccagcagatg 941
                 |||  ||| |||||||||||||||||||| ||||| ||||| |||||||| |||||||||
Sbjct: 314136012 accagccgcggcagccagcagtaccgcgcgctgacggtgcccgagctcacgcagcagatg 314135953

                                                                             
Query: 942       ttcgatgccaagaacatgatggccgcctgcgaccctcgccacggccgctacctgaccgtg 1001
                 ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| |||
Sbjct: 314135952 ttcgacgccaagaacatgatggccgcctgcgacccgcgccacggccgctacctgacggtg 314135893

                                                                             
Query: 1002      gccactgtcttcaggggccccatgtccatgaaggaggtggacgagcagatgctggccatc 1061
                 ||  |||| |||||||||| |||||||||||||||||||||||||||||||||   | | 
Sbjct: 314135892 gctgctgtgttcaggggccgcatgtccatgaaggaggtggacgagcagatgctcaacgtg 314135833

                                                                             
Query: 1062      cagaacaagaacagcagctacttcgtggagtggatccccaacaatgtgaaggtggccgtg 1121
                 |||||||||||||||||||||||||||||||||||||||||||| || |||  |||||||
Sbjct: 314135832 cagaacaagaacagcagctacttcgtggagtggatccccaacaacgtcaagacggccgtg 314135773

                                                                             
Query: 1122      tgcgacatcccgccatgtggcctgaagatggctgccaccttcattggcaacagcacagcc 1181
                 ||||||||||||||  | ||||| |||||| | ||||||||||| ||||||||||| |||
Sbjct: 314135772 tgcgacatcccgccgcgcggcctcaagatgtcggccaccttcatcggcaacagcacggcc 314135713

                                                                             
Query: 1182      atccangagctgtttcagcgcatctcagagcagttcttcggcatgttcccgcgcaaggcc 1241
                 ||||| ||||||||  |||||||||| |||||||||   | |||||||| ||||||||||
Sbjct: 314135712 atccaggagctgttcaagcgcatctcggagcagttcacggccatgttccggcgcaaggcc 314135653

                                                                             
Query: 1242      ttcctgcactggttcacgggcgaggncatggacgaaatggagttcaccgaggctgaaagc 1301
                 ||||||||||||| ||||||||||| ||||||||| ||||||||||||||||| || |||
Sbjct: 314135652 ttcctgcactggtacacgggcgagggcatggacgagatggagttcaccgaggccgagagc 314135593

                                                        
Query: 1302      aacatgaacgaactggtgtccgattaccagcagtaccag 1340
                 ||||||||||| ||||||||||| |||||||||||||||
Sbjct: 314135592 aacatgaacgacctggtgtccgagtaccagcagtaccag 314135554



 Score = 71.9 bits (36), Expect = 9e-10
 Identities = 54/60 (90%)
 Strand = Plus / Minus

                                                                             
Query: 60        gccatgagggagatcgtgcacatccaggcgggccagtgcgggaatcagatcggcaccaag 119
                 ||||||||||||||||||||| | ||||| ||||||||||| || ||||||||| |||||
Sbjct: 314137685 gccatgagggagatcgtgcacctgcaggccggccagtgcggcaaccagatcggcgccaag 314137626



 Score = 69.9 bits (35), Expect = 3e-09
 Identities = 71/83 (85%)
 Strand = Plus / Minus

                                                                             
Query: 258       gtggacttggagccgggcaccatggacagtgtgcggtccgggccttttgggcagctcttc 317
                 |||||| | ||||||||||||||||||   ||||| || ||||| || |||||| |||||
Sbjct: 314137122 gtggaccttgagccgggcaccatggactccgtgcgctcggggcccttcgggcagatcttc 314137063

                                        
Query: 318       cggccggacaacttcatcttcgg 340
                  |||||||||||||| |||||||
Sbjct: 314137062 aggccggacaacttcgtcttcgg 314137040


>Sscrofa_Chr02 
||          Length = 162569375

 Score = 1168 bits (589), Expect = 0.0
 Identities = 887/987 (89%)
 Strand = Plus / Minus

                                                                            
Query: 354      ggcaacaactgggccaagggccactacacggagggtgcggagctgatggactcagtcctg 413
                ||||||||||||||||||||||||||||| ||||| || |||||| ||||| | || |||
Sbjct: 72986999 ggcaacaactgggccaagggccactacacagagggcgccgagctggtggacgcggttctg 72986940

                                                                            
Query: 414      gatgtggtgcggaaggagagcgagcactgcgactgcctgcagggcttccagctcacccac 473
                || ||||| |||||||||   |||  ||| |||||||||||||||||||| || ||||||
Sbjct: 72986939 gacgtggtccggaaggaggcggagagctgtgactgcctgcagggcttccaactgacccac 72986880

                                                                            
Query: 474      tcgctgggcggtggcacaggctccgggatgggcaccttgctcatcagcaagatccgagag 533
                ||||||||||||||||| || ||||| ||||| ||| ||||||||||||||||||| |||
Sbjct: 72986879 tcgctgggcggtggcacggggtccggcatggggaccctgctcatcagcaagatccgcgag 72986820

                                                                            
Query: 534      gagttccctgatcgcatcatgaacaccttcagcgtcatgccctcacccaaggtgtcagac 593
                |||||||| || || ||||||||||||||||||||  | ||||| ||||||||||| |||
Sbjct: 72986819 gagttcccggaccggatcatgaacaccttcagcgtggtaccctcccccaaggtgtctgac 72986760

                                                                            
Query: 594      acggtggtcgagccctacaacgccacgctgtccgtgcaccagctggtggagaacacggat 653
                |||||||| ||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct: 72986759 acggtggtggagccctacaacgccacgctgtcggttcaccagctggtggagaacacggat 72986700

                                                                            
Query: 654      gagacctactgcatcgacaacgaggccctgtatgacatctgcttccgcaccctgaagctg 713
                |||||||||||||||||||||||||| || || |||||||||||||||||||||||||||
Sbjct: 72986699 gagacctactgcatcgacaacgaggcgctctacgacatctgcttccgcaccctgaagctg 72986640

                                                                            
Query: 714      accacgcctacctacggggacctcaaccacctggtgtcggccaccatgagtggggtcacc 773
                ||||| || |||||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 72986639 accacccccacctacggcgacctcaaccacctggtgtcggccaccatgagcggggtcacc 72986580

                                                                            
Query: 774      acctccctgcgctttccaggccagctcaacgctgacctgcgcaagctggctgtgaacatg 833
                || | ||||||||| || |||||||||||||| ||||||||||||||||| |||||||||
Sbjct: 72986579 acgtgcctgcgcttcccgggccagctcaacgccgacctgcgcaagctggccgtgaacatg 72986520

                                                                            
Query: 834      gtccccttcccacgcctgcacttcttcatgcccggcttcgcgccgctaaccgcccggggc 893
                || |||||||| |||||||||||||||||||| ||||| |||||||| |||  |||||||
Sbjct: 72986519 gtgcccttcccccgcctgcacttcttcatgccgggctttgcgccgctgaccagccggggc 72986460

                                                                            
Query: 894      agccagcagtaccgcgccctgacagtgccagagctcacccagcagatgttcgatgccaag 953
                |||||||||||||| || ||||| ||||| || |||||||||||||||||||| ||||||
Sbjct: 72986459 agccagcagtaccgggcactgacggtgcccgaactcacccagcagatgttcgacgccaag 72986400

                                                                            
Query: 954      aacatgatggccgcctgcgaccctcgccacggccgctacctgaccgtggccactgtcttc 1013
                ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| |||
Sbjct: 72986399 aacatgatggccgcctgcgacccccgccacggccgctacctgaccgtggccgctgtgttc 72986340

                                                                            
Query: 1014     aggggccccatgtccatgaaggaggtggacgagcagatgctggccatccagaacaagaac 1073
                 |||||| ||||||||||||||||||||| ||||||||||||  | |||||| |||||||
Sbjct: 72986339 cggggccgcatgtccatgaaggaggtggatgagcagatgctgagcgtccagagcaagaac 72986280

                                                                            
Query: 1074     agcagctacttcgtggagtggatccccaacaatgtgaaggtggccgtgtgcgacatcccg 1133
                ||||||||||||||||||||||| |||||||| || |||  |||||||||||||||||||
Sbjct: 72986279 agcagctacttcgtggagtggattcccaacaacgtcaagacggccgtgtgcgacatcccg 72986220

                                                                            
Query: 1134     ccatgtggcctgaagatggctgccaccttcattggcaacagcacagccatccangagctg 1193
                ||  |||||||||||||||| ||||| ||||| ||||||||||| |||||||| ||||||
Sbjct: 72986219 ccccgtggcctgaagatggccgccactttcatcggcaacagcacggccatccaggagctg 72986160

                                                                            
Query: 1194     tttcagcgcatctcagagcagttcttcggcatgttcccgcgcaaggccttcctgcactgg 1253
                ||  |||||||||| || ||||||   | |||||||| ||||||||||||||||||||||
Sbjct: 72986159 ttcaagcgcatctccgaacagttcacggccatgttccggcgcaaggccttcctgcactgg 72986100

                                                                            
Query: 1254     ttcacgggcgaggncatggacgaaatggagttcaccgaggctgaaagcaacatgaacgaa 1313
                | ||||||||||| |||||| || ||||||||||| ||||| || |||||||||||||| 
Sbjct: 72986099 tacacgggcgagggcatggatgagatggagttcactgaggcagagagcaacatgaacgac 72986040

                                           
Query: 1314     ctggtgtccgattaccagcagtaccag 1340
                ||||||||||| |||||||||||||||
Sbjct: 72986039 ctggtgtccgagtaccagcagtaccag 72986013



 Score = 1168 bits (589), Expect = 0.0
 Identities = 887/987 (89%)
 Strand = Plus / Minus

                                                                            
Query: 354      ggcaacaactgggccaagggccactacacggagggtgcggagctgatggactcagtcctg 413
                ||||||||||||||||||||||||||||| ||||| || |||||| ||||| | || |||
Sbjct: 73065516 ggcaacaactgggccaagggccactacacagagggcgccgagctggtggacgcggttctg 73065457

                                                                            
Query: 414      gatgtggtgcggaaggagagcgagcactgcgactgcctgcagggcttccagctcacccac 473
                || ||||| |||||||||   |||  ||| |||||||||||||||||||| || ||||||
Sbjct: 73065456 gacgtggtccggaaggaggcggagagctgtgactgcctgcagggcttccaactgacccac 73065397

                                                                            
Query: 474      tcgctgggcggtggcacaggctccgggatgggcaccttgctcatcagcaagatccgagag 533
                ||||||||||||||||| || ||||| ||||| ||| ||||||||||||||||||| |||
Sbjct: 73065396 tcgctgggcggtggcacggggtccggcatggggaccctgctcatcagcaagatccgcgag 73065337

                                                                            
Query: 534      gagttccctgatcgcatcatgaacaccttcagcgtcatgccctcacccaaggtgtcagac 593
                |||||||| || || ||||||||||||||||||||  | ||||| ||||||||||| |||
Sbjct: 73065336 gagttcccggaccggatcatgaacaccttcagcgtggtaccctcccccaaggtgtctgac 73065277

                                                                            
Query: 594      acggtggtcgagccctacaacgccacgctgtccgtgcaccagctggtggagaacacggat 653
                |||||||| ||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct: 73065276 acggtggtggagccctacaacgccacgctgtcggttcaccagctggtggagaacacggat 73065217

                                                                            
Query: 654      gagacctactgcatcgacaacgaggccctgtatgacatctgcttccgcaccctgaagctg 713
                |||||||||||||||||||||||||| || || |||||||||||||||||||||||||||
Sbjct: 73065216 gagacctactgcatcgacaacgaggcgctctacgacatctgcttccgcaccctgaagctg 73065157

                                                                            
Query: 714      accacgcctacctacggggacctcaaccacctggtgtcggccaccatgagtggggtcacc 773
                ||||| || |||||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 73065156 accacccccacctacggcgacctcaaccacctggtgtcggccaccatgagcggggtcacc 73065097

                                                                            
Query: 774      acctccctgcgctttccaggccagctcaacgctgacctgcgcaagctggctgtgaacatg 833
                || | ||||||||| || |||||||||||||| ||||||||||||||||| |||||||||
Sbjct: 73065096 acgtgcctgcgcttcccgggccagctcaacgccgacctgcgcaagctggccgtgaacatg 73065037

                                                                            
Query: 834      gtccccttcccacgcctgcacttcttcatgcccggcttcgcgccgctaaccgcccggggc 893
                || |||||||| |||||||||||||||||||| ||||| |||||||| |||  |||||||
Sbjct: 73065036 gtgcccttcccccgcctgcacttcttcatgccgggctttgcgccgctgaccagccggggc 73064977

                                                                            
Query: 894      agccagcagtaccgcgccctgacagtgccagagctcacccagcagatgttcgatgccaag 953
                |||||||||||||| || ||||| ||||| || |||||||||||||||||||| ||||||
Sbjct: 73064976 agccagcagtaccgggcactgacggtgcccgaactcacccagcagatgttcgacgccaag 73064917

                                                                            
Query: 954      aacatgatggccgcctgcgaccctcgccacggccgctacctgaccgtggccactgtcttc 1013
                ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| |||
Sbjct: 73064916 aacatgatggccgcctgcgacccccgccacggccgctacctgaccgtggccgctgtgttc 73064857

                                                                            
Query: 1014     aggggccccatgtccatgaaggaggtggacgagcagatgctggccatccagaacaagaac 1073
                 |||||| ||||||||||||||||||||| ||||||||||||  | |||||| |||||||
Sbjct: 73064856 cggggccgcatgtccatgaaggaggtggatgagcagatgctgagcgtccagagcaagaac 73064797

                                                                            
Query: 1074     agcagctacttcgtggagtggatccccaacaatgtgaaggtggccgtgtgcgacatcccg 1133
                ||||||||||||||||||||||| |||||||| || |||  |||||||||||||||||||
Sbjct: 73064796 agcagctacttcgtggagtggattcccaacaacgtcaagacggccgtgtgcgacatcccg 73064737

                                                                            
Query: 1134     ccatgtggcctgaagatggctgccaccttcattggcaacagcacagccatccangagctg 1193
                ||  |||||||||||||||| ||||| ||||| ||||||||||| |||||||| ||||||
Sbjct: 73064736 ccccgtggcctgaagatggccgccactttcatcggcaacagcacggccatccaggagctg 73064677

                                                                            
Query: 1194     tttcagcgcatctcagagcagttcttcggcatgttcccgcgcaaggccttcctgcactgg 1253
                ||  |||||||||| || ||||||   | |||||||| ||||||||||||||||||||||
Sbjct: 73064676 ttcaagcgcatctccgaacagttcacggccatgttccggcgcaaggccttcctgcactgg 73064617

                                                                            
Query: 1254     ttcacgggcgaggncatggacgaaatggagttcaccgaggctgaaagcaacatgaacgaa 1313
                | ||||||||||| |||||| || ||||||||||| ||||| || |||||||||||||| 
Sbjct: 73064616 tacacgggcgagggcatggatgagatggagttcactgaggcagagagcaacatgaacgac 73064557

                                           
Query: 1314     ctggtgtccgattaccagcagtaccag 1340
                ||||||||||| |||||||||||||||
Sbjct: 73064556 ctggtgtccgagtaccagcagtaccag 73064530


>Sscrofa_Chr17 
||          Length = 69701581

 Score =  712 bits (359), Expect = 0.0
 Identities = 721/842 (85%)
 Strand = Plus / Plus

                                                                            
Query: 354      ggcaacaactgggccaagggccactacacggagggtgcggagctgatggactcagtcctg 413
                ||||||||||||||||||||||||||||||||||| || |||||| ||||    || |||
Sbjct: 66536039 ggcaacaactgggccaagggccactacacggagggggccgagctggtggagggcgtgctg 66536098

                                                                            
Query: 414      gatgtggtgcggaaggagagcgagcactgcgactgcctgcagggcttccagctcacccac 473
                || |  ||||| |  |||  ||||  ||||||||||||||||||||||||| |    |||
Sbjct: 66536099 gacgccgtgcgcagcgaggccgagggctgcgactgcctgcagggcttccaggtggtgcac 66536158

                                                                            
Query: 474      tcgctgggcggtggcacaggctccgggatgggcaccttgctcatcagcaagatccgagag 533
                ||||||||||| ||||| || ||||||||||||||  |||||||  |||||||||| |||
Sbjct: 66536159 tcgctgggcggcggcacggggtccgggatgggcacgctgctcatgggcaagatccgcgag 66536218

                                                                            
Query: 534      gagttccctgatcgcatcatgaacaccttcagcgtcatgccctcacccaaggtgtcagac 593
                |||||||| || |||||| | ||| |||||||||||||||||||  |||||||||| |||
Sbjct: 66536219 gagttcccggaccgcatcctcaactccttcagcgtcatgccctcggccaaggtgtcggac 66536278

                                                                            
Query: 594      acggtggtcgagccctacaacgccacgctgtccgtgcaccagctggtggagaacacggat 653
                |||||||| |||||||||||||||  ||||||| | ||||||||| || ||||| | || 
Sbjct: 66536279 acggtggtggagccctacaacgccgtgctgtccatccaccagctgctgcagaacgccgac 66536338

                                                                            
Query: 654      gagacctactgcatcgacaacgaggccctgtatgacatctgcttccgcaccctgaagctg 713
                |    || |||||||||||||||||| || || |||||||||| ||||||||||| ||||
Sbjct: 66536339 gcctgcttctgcatcgacaacgaggcgctctacgacatctgctgccgcaccctgaggctg 66536398

                                                                            
Query: 714      accacgcctacctacggggacctcaaccacctggtgtcggccaccatgagtggggtcacc 773
                |||||||| |||||||| |||||||||||||||||||||   |||||||| || ||||||
Sbjct: 66536399 accacgcccacctacggcgacctcaaccacctggtgtcgctgaccatgagcggcgtcacc 66536458

                                                                            
Query: 774      acctccctgcgctttccaggccagctcaacgctgacctgcgcaagctggctgtgaacatg 833
                || || |||||||| || |||||||||||||| ||||||||||||||||| |||||||||
Sbjct: 66536459 acgtcgctgcgcttccccggccagctcaacgccgacctgcgcaagctggccgtgaacatg 66536518

                                                                            
Query: 834      gtccccttcccacgcctgcacttcttcatgcccggcttcgcgccgctaaccgcccggggc 893
                || |||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||
Sbjct: 66536519 gtgcccttcccgcgcctgcacttcttcatgcccggcttcgcgccgctcaccgcccagggc 66536578

                                                                            
Query: 894      agccagcagtaccgcgccctgacagtgccagagctcacccagcagatgttcgatgccaag 953
                ||||||||||||||||| ||||| ||| | ||||||||||||||||||||||| |||   
Sbjct: 66536579 agccagcagtaccgcgcgctgaccgtggccgagctcacccagcagatgttcgacgcccgc 66536638

                                                                            
Query: 954      aacatgatggccgcctgcgaccctcgccacggccgctacctgaccgtggccactgtcttc 1013
                ||||  ||| ||||||||||||| |||| ||||||||||||||||||||||    |||||
Sbjct: 66536639 aacaccatgaccgcctgcgacccccgccgcggccgctacctgaccgtggcctgcatcttc 66536698

                                                                            
Query: 1014     aggggccccatgtccatgaaggaggtggacgagcagatgctggccatccagaacaagaac 1073
                 |||| |  |||||||  ||||| |||||||||||| ||||  || | |||| || ||||
Sbjct: 66536699 cgggggcagatgtccaccaaggaagtggacgagcagctgctcaccgtgcagaccaggaac 66536758

                                                                            
Query: 1074     agcagctacttcgtggagtggatccccaacaatgtgaaggtggccgtgtgcgacatcccg 1133
                ||||||| ||||||||||||||||||||||||  | ||||||||||||||||||||||||
Sbjct: 66536759 agcagctgcttcgtggagtggatccccaacaacctcaaggtggccgtgtgcgacatcccg 66536818

                                                                            
Query: 1134     ccatgtggcctgaagatggctgccaccttcattggcaacagcacagccatccangagctg 1193
                ||  | || ||||  ||||| ||||||||||| ||||||||||| |||||||| ||||||
Sbjct: 66536819 ccccgggggctgagcatggcggccaccttcatcggcaacagcacggccatccaggagctg 66536878

                  
Query: 1194     tt 1195
                ||
Sbjct: 66536879 tt 66536880


>gb|GL895527.2| Sus scrofa unplaced genomic scaffold ChrUScaf3411
          Length = 22714

 Score =  500 bits (252), Expect = e-138
 Identities = 252/252 (100%)
 Strand = Plus / Minus

                                                                       
Query: 339 ggacagactggtgctggcaacaactgggccaagggccactacacggagggtgcggagctg 398
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 ggacagactggtgctggcaacaactgggccaagggccactacacggagggtgcggagctg 425

                                                                       
Query: 399 atggactcagtcctggatgtggtgcggaaggagagcgagcactgcgactgcctgcagggc 458
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 atggactcagtcctggatgtggtgcggaaggagagcgagcactgcgactgcctgcagggc 365

                                                                       
Query: 459 ttccagctcacccactcgctgggcggtggcacaggctccgggatgggcaccttgctcatc 518
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 ttccagctcacccactcgctgggcggtggcacaggctccgggatgggcaccttgctcatc 305

                                                                       
Query: 519 agcaagatccgagaggagttccctgatcgcatcatgaacaccttcagcgtcatgccctca 578
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 agcaagatccgagaggagttccctgatcgcatcatgaacaccttcagcgtcatgccctca 245

                       
Query: 579 cccaaggtgtca 590
           ||||||||||||
Sbjct: 244 cccaaggtgtca 233



 Score =  262 bits (132), Expect = 4e-67
 Identities = 132/132 (100%)
 Strand = Plus / Minus

                                                                       
Query: 739 accacctggtgtcggccaccatgagtggggtcaccacctccctgcgctttccaggccagc 798
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 accacctggtgtcggccaccatgagtggggtcaccacctccctgcgctttccaggccagc 73

                                                                       
Query: 799 tcaacgctgacctgcgcaagctggctgtgaacatggtccccttcccacgcctgcacttct 858
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72  tcaacgctgacctgcgcaagctggctgtgaacatggtccccttcccacgcctgcacttct 13

                       
Query: 859 tcatgcccggct 870
           ||||||||||||
Sbjct: 12  tcatgcccggct 1



 Score =  222 bits (112), Expect = 4e-55
 Identities = 112/112 (100%)
 Strand = Plus / Minus

                                                                        
Query: 229  ctcagaaatacgtgcccagggcagccctggtggacttggagccgggcaccatggacagtg 288
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3658 ctcagaaatacgtgcccagggcagccctggtggacttggagccgggcaccatggacagtg 3599

                                                                
Query: 289  tgcggtccgggccttttgggcagctcttccggccggacaacttcatcttcgg 340
            ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3598 tgcggtccgggccttttgggcagctcttccggccggacaacttcatcttcgg 3547


  Database: Sscrofa_10.2.fasta
    Posted date:  Nov 16, 2011 10:34 AM
  Number of letters in database: 2,808,509,378
  Number of sequences in database:  4582
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 27,784,884
Number of extensions: 173
Number of successful extensions: 173
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 160
Number of HSP's successfully gapped: 22
Length of query: 1340
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1319
Effective length of database: 2,808,413,156
Effective search space: 3704296952764
Effective search space used: 3704296952764
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)