Animal-Genome cDNA 20110601C-006973

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-006973
         (2448 letters)

Database: RefSeq49_BP.fasta 
           33,088 sequences; 17,681,374 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001040014.1| tubulin beta-5 chain [Bos taurus].                830   0.0  
Alignment   gi|NP_001029835.1| tubulin beta-2C chain [Bos taurus].               823   0.0  
Alignment   gi|NP_001029869.1| tubulin beta-4 chain [Bos taurus].                815   0.0  
Alignment   gi|NP_001003900.1| tubulin beta-2B chain [Bos taurus].               812   0.0  
Alignment   gi|XP_002697652.1| PREDICTED: tubulin, beta 2-like [Bos taurus].     810   0.0  
Alignment   gi|XP_002703003.1| PREDICTED: tubulin, beta 2 [Bos taurus].          810   0.0  
Alignment   gi|XP_002698826.1| PREDICTED: tubulin, beta 5-like [Bos taurus].     788   0.0  
Alignment   gi|XP_612678.3| PREDICTED: tubulin, beta 5-like [Bos taurus].        788   0.0  
Alignment   gi|NP_001070595.1| tubulin beta-3 chain [Bos taurus].                784   0.0  
Alignment   gi|NP_001039838.1| tubulin beta-6 chain [Bos taurus].                777   0.0  

>ref|NP_001040014.1| tubulin beta-5 chain [Bos taurus].
          Length = 444

 Score =  830 bits (2145), Expect = 0.0
 Identities = 408/427 (95%), Positives = 408/427 (95%)
 Frame = +3

Query: 174  MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYV 353
            MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYV
Sbjct: 1    MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYV 60

Query: 354  PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 533
            PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 61   PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120

Query: 534  RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 713
            RKEAESCDCLQGFQ                   KIREEYPDRIMNTFSVVPSPKVSDTVV
Sbjct: 121  RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV 180

Query: 714  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 893
            EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
Sbjct: 181  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240

Query: 894  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMM 1073
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMM
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMM 300

Query: 1074 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 1253
            AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
Sbjct: 301  AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 360

Query: 1254 LKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 1433
            LKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361  LKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 1434 EYQQYQD 1454
            EYQQYQD
Sbjct: 421  EYQQYQD 427


>ref|NP_001029835.1| tubulin beta-2C chain [Bos taurus].
          Length = 445

 Score =  823 bits (2125), Expect = 0.0
 Identities = 401/427 (93%), Positives = 407/427 (95%)
 Frame = +3

Query: 174  MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYV 353
            MREIVH+QAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL+RI+VYYNEATGGKYV
Sbjct: 1    MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60

Query: 354  PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 533
            PRA+LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 61   PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120

Query: 534  RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 713
            RKEAESCDCLQGFQ                   KIREEYPDRIMNTFSVVPSPKVSDTVV
Sbjct: 121  RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV 180

Query: 714  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 893
            EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
Sbjct: 181  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240

Query: 894  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMM 1073
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQ+FDAKNMM
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 300

Query: 1074 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 1253
            AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
Sbjct: 301  AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 360

Query: 1254 LKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 1433
            LKM+ TFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361  LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 1434 EYQQYQD 1454
            EYQQYQD
Sbjct: 421  EYQQYQD 427


>ref|NP_001029869.1| tubulin beta-4 chain [Bos taurus].
          Length = 444

 Score =  815 bits (2106), Expect = 0.0
 Identities = 397/427 (92%), Positives = 406/427 (95%)
 Frame = +3

Query: 174  MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYV 353
            MREIVH+QAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL+RI+VYYNEATGG YV
Sbjct: 1    MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGNYV 60

Query: 354  PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 533
            PRA+LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDVV
Sbjct: 61   PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDAVLDVV 120

Query: 534  RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 713
            RKEAESCDCLQGFQ                   KIREE+PDRIMNTFSVVPSPKVSDTVV
Sbjct: 121  RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTFSVVPSPKVSDTVV 180

Query: 714  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 893
            EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
Sbjct: 181  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240

Query: 894  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMM 1073
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQ+FDAKNMM
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 300

Query: 1074 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 1253
            AACDPRHGRYLTVAAVFRGRMSMKEVDEQML+VQ+KNSSYFVEWIPNNVKTAVCDIPPRG
Sbjct: 301  AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLSVQSKNSSYFVEWIPNNVKTAVCDIPPRG 360

Query: 1254 LKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 1433
            LKMA TFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361  LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 1434 EYQQYQD 1454
            EYQQYQD
Sbjct: 421  EYQQYQD 427


>ref|NP_001003900.1| tubulin beta-2B chain [Bos taurus].
          Length = 445

 Score =  812 bits (2098), Expect = 0.0
 Identities = 396/427 (92%), Positives = 405/427 (94%)
 Frame = +3

Query: 174  MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYV 353
            MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTG+YHGDSDLQL+RI+VYYNEATG KYV
Sbjct: 1    MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEATGNKYV 60

Query: 354  PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 533
            PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 61   PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120

Query: 534  RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 713
            RKE+ESCDCLQGFQ                   KIREEYPDRIMNTFSV+PSPKVSDTVV
Sbjct: 121  RKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVV 180

Query: 714  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 893
            EPYNATLSVHQLVENTDETY IDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
Sbjct: 181  EPYNATLSVHQLVENTDETYSIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240

Query: 894  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMM 1073
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQ+FD+KNMM
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMM 300

Query: 1074 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 1253
            AACDPRHGRYLTVAA+FRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
Sbjct: 301  AACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 360

Query: 1254 LKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 1433
            LKM+ TFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361  LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 1434 EYQQYQD 1454
            EYQQYQD
Sbjct: 421  EYQQYQD 427


>ref|XP_002697652.1| PREDICTED: tubulin, beta 2-like [Bos taurus].
          Length = 445

 Score =  810 bits (2093), Expect = 0.0
 Identities = 395/427 (92%), Positives = 404/427 (94%)
 Frame = +3

Query: 174  MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYV 353
            MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTG+YHGDSDLQL+RI+VYYNEA G KYV
Sbjct: 1    MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEAAGNKYV 60

Query: 354  PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 533
            PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 61   PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120

Query: 534  RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 713
            RKE+ESCDCLQGFQ                   KIREEYPDRIMNTFSV+PSPKVSDTVV
Sbjct: 121  RKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVV 180

Query: 714  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 893
            EPYNATLSVHQLVENTDETY IDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
Sbjct: 181  EPYNATLSVHQLVENTDETYSIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240

Query: 894  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMM 1073
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQ+FD+KNMM
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMM 300

Query: 1074 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 1253
            AACDPRHGRYLTVAA+FRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
Sbjct: 301  AACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 360

Query: 1254 LKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 1433
            LKM+ TFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361  LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 1434 EYQQYQD 1454
            EYQQYQD
Sbjct: 421  EYQQYQD 427


>ref|XP_002703003.1| PREDICTED: tubulin, beta 2 [Bos taurus].
          Length = 445

 Score =  810 bits (2093), Expect = 0.0
 Identities = 395/427 (92%), Positives = 404/427 (94%)
 Frame = +3

Query: 174  MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYV 353
            MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTG+YHGDSDLQL+RI+VYYNEA G KYV
Sbjct: 1    MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEAAGNKYV 60

Query: 354  PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 533
            PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 61   PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120

Query: 534  RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 713
            RKE+ESCDCLQGFQ                   KIREEYPDRIMNTFSV+PSPKVSDTVV
Sbjct: 121  RKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVV 180

Query: 714  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 893
            EPYNATLSVHQLVENTDETY IDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
Sbjct: 181  EPYNATLSVHQLVENTDETYSIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240

Query: 894  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMM 1073
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQ+FD+KNMM
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMM 300

Query: 1074 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 1253
            AACDPRHGRYLTVAA+FRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
Sbjct: 301  AACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 360

Query: 1254 LKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 1433
            LKM+ TFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361  LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 1434 EYQQYQD 1454
            EYQQYQD
Sbjct: 421  EYQQYQD 427


>ref|XP_002698826.1| PREDICTED: tubulin, beta 5-like [Bos taurus].
          Length = 444

 Score =  788 bits (2034), Expect = 0.0
 Identities = 390/427 (91%), Positives = 393/427 (92%)
 Frame = +3

Query: 174  MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYV 353
            MREIVHIQAGQCGNQIGAKFWEVISDEHGID TGTYHGDSDLQLDRISVYYNEATGGKYV
Sbjct: 1    MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGTYHGDSDLQLDRISVYYNEATGGKYV 60

Query: 354  PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 533
            PRAILVDLEPGTMDSV SGPFGQIFR DN VFGQSGA NNWAKGHY EGAELVDSVLDVV
Sbjct: 61   PRAILVDLEPGTMDSVHSGPFGQIFRSDNIVFGQSGADNNWAKGHYREGAELVDSVLDVV 120

Query: 534  RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 713
            RKEA+SCDCLQGFQ                   KIREEYPD IMNTFSVVPSPKVSDTVV
Sbjct: 121  RKEAKSCDCLQGFQLTHSLGGGTDSGMGTLLISKIREEYPDHIMNTFSVVPSPKVSDTVV 180

Query: 714  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 893
            EPYNATLSVHQLVENTDETYCIDNEALY ICFRTLKLTTPTYGDLN LVSATMSGVTTCL
Sbjct: 181  EPYNATLSVHQLVENTDETYCIDNEALYAICFRTLKLTTPTYGDLNQLVSATMSGVTTCL 240

Query: 894  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMM 1073
            RFPGQLNADL KLAVNMVPFP LHFF+PGFAPLTS GSQQY ALTVPELTQQVFDAKNMM
Sbjct: 241  RFPGQLNADLHKLAVNMVPFPHLHFFVPGFAPLTSCGSQQYWALTVPELTQQVFDAKNMM 300

Query: 1074 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 1253
            AACDPRHGRYLTVAAVFRG+MSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
Sbjct: 301  AACDPRHGRYLTVAAVFRGQMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 360

Query: 1254 LKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 1433
            LKMAVTFIGNSTAIQELFKRISEQF AMFRRKAFLHWYTGEGMDE EFTEAESNMNDLVS
Sbjct: 361  LKMAVTFIGNSTAIQELFKRISEQFMAMFRRKAFLHWYTGEGMDETEFTEAESNMNDLVS 420

Query: 1434 EYQQYQD 1454
            EYQQYQD
Sbjct: 421  EYQQYQD 427


>ref|XP_612678.3| PREDICTED: tubulin, beta 5-like [Bos taurus].
          Length = 444

 Score =  788 bits (2034), Expect = 0.0
 Identities = 390/427 (91%), Positives = 393/427 (92%)
 Frame = +3

Query: 174  MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYV 353
            MREIVHIQAGQCGNQIGAKFWEVISDEHGID TGTYHGDSDLQLDRISVYYNEATGGKYV
Sbjct: 1    MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGTYHGDSDLQLDRISVYYNEATGGKYV 60

Query: 354  PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 533
            PRAILVDLEPGTMDSV SGPFGQIFR DN VFGQSGA NNWAKGHY EGAELVDSVLDVV
Sbjct: 61   PRAILVDLEPGTMDSVHSGPFGQIFRSDNIVFGQSGADNNWAKGHYREGAELVDSVLDVV 120

Query: 534  RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 713
            RKEA+SCDCLQGFQ                   KIREEYPD IMNTFSVVPSPKVSDTVV
Sbjct: 121  RKEAKSCDCLQGFQLTHSLGGGTDSGMGTLLISKIREEYPDHIMNTFSVVPSPKVSDTVV 180

Query: 714  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 893
            EPYNATLSVHQLVENTDETYCIDNEALY ICFRTLKLTTPTYGDLN LVSATMSGVTTCL
Sbjct: 181  EPYNATLSVHQLVENTDETYCIDNEALYAICFRTLKLTTPTYGDLNQLVSATMSGVTTCL 240

Query: 894  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMM 1073
            RFPGQLNADL KLAVNMVPFP LHFF+PGFAPLTS GSQQY ALTVPELTQQVFDAKNMM
Sbjct: 241  RFPGQLNADLHKLAVNMVPFPHLHFFVPGFAPLTSCGSQQYWALTVPELTQQVFDAKNMM 300

Query: 1074 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 1253
            AACDPRHGRYLTVAAVFRG+MSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
Sbjct: 301  AACDPRHGRYLTVAAVFRGQMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 360

Query: 1254 LKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 1433
            LKMAVTFIGNSTAIQELFKRISEQF AMFRRKAFLHWYTGEGMDE EFTEAESNMNDLVS
Sbjct: 361  LKMAVTFIGNSTAIQELFKRISEQFMAMFRRKAFLHWYTGEGMDETEFTEAESNMNDLVS 420

Query: 1434 EYQQYQD 1454
            EYQQYQD
Sbjct: 421  EYQQYQD 427


>ref|NP_001070595.1| tubulin beta-3 chain [Bos taurus].
          Length = 450

 Score =  784 bits (2025), Expect = 0.0
 Identities = 382/427 (89%), Positives = 395/427 (92%)
 Frame = +3

Query: 174  MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYV 353
            MREIVHIQAGQCGNQIGAKFWEVISDEHGIDP+G Y GDSDLQL+RISVYYNEA+  KYV
Sbjct: 1    MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPSGNYVGDSDLQLERISVYYNEASSHKYV 60

Query: 354  PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 533
            PRAILVDLEPGTMDSVRSG FG +FRPDNF+FGQSGAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 61   PRAILVDLEPGTMDSVRSGAFGHLFRPDNFIFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120

Query: 534  RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 713
            RKE E+CDCLQGFQ                   K+REEYPDRIMNTFSVVPSPKVSDTVV
Sbjct: 121  RKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKVREEYPDRIMNTFSVVPSPKVSDTVV 180

Query: 714  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 893
            EPYNATLS+HQLVENTDETYCIDNEALYDICFRTLKL TPTYGDLNHLVSATMSGVTT L
Sbjct: 181  EPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKLATPTYGDLNHLVSATMSGVTTSL 240

Query: 894  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMM 1073
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT+RGSQQYRALTVPELTQQ+FDAKNMM
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMM 300

Query: 1074 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 1253
            AACDPRHGRYLTVA VFRGRMSMKEVDEQML +Q+KNSSYFVEWIPNNVK AVCDIPPRG
Sbjct: 301  AACDPRHGRYLTVATVFRGRMSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVCDIPPRG 360

Query: 1254 LKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 1433
            LKM+ TFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361  LKMSSTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 1434 EYQQYQD 1454
            EYQQYQD
Sbjct: 421  EYQQYQD 427


>ref|NP_001039838.1| tubulin beta-6 chain [Bos taurus].
          Length = 446

 Score =  777 bits (2007), Expect = 0.0
 Identities = 379/427 (88%), Positives = 393/427 (92%)
 Frame = +3

Query: 174  MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYV 353
            MREIVHIQAGQCGNQIG KFWEVISDEHGIDP G Y GDS LQL+RI+VYYNE++  KYV
Sbjct: 1    MREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGGYVGDSALQLERINVYYNESSSQKYV 60

Query: 354  PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 533
            PRA LVDLEPGTMDSVRSGPFGQ+FRPDNF+FGQ+GAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 61   PRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELVDSVLDVV 120

Query: 534  RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 713
            RKE E CDCLQGFQ                   KIREEYPDRIMNTFSV+PSPKVSDTVV
Sbjct: 121  RKECEHCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVV 180

Query: 714  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 893
            EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT L
Sbjct: 181  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSL 240

Query: 894  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMM 1073
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT+RGSQQYRALTVPELTQQ+FDAKNMM
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMM 300

Query: 1074 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 1253
            AACDPRHGRYLTVAAVFRG MSMKEVDEQML +QNKNSSYFVEWIPNNVK AVCDIPPRG
Sbjct: 301  AACDPRHGRYLTVAAVFRGPMSMKEVDEQMLAIQNKNSSYFVEWIPNNVKVAVCDIPPRG 360

Query: 1254 LKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 1433
            LKM+ TFIGNSTAIQELFKRISEQF+AMFRRKAFLHW+TGEGMDEMEFTEAESNMNDLVS
Sbjct: 361  LKMSATFIGNSTAIQELFKRISEQFSAMFRRKAFLHWFTGEGMDEMEFTEAESNMNDLVS 420

Query: 1434 EYQQYQD 1454
            EYQQYQD
Sbjct: 421  EYQQYQD 427


  Database: RefSeq49_BP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 17,681,374
  Number of sequences in database:  33,088
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 99,052,669
Number of extensions: 3043774
Number of successful extensions: 10410
Number of sequences better than 1.0e-05: 37
Number of HSP's gapped: 10311
Number of HSP's successfully gapped: 37
Length of query: 816
Length of database: 17,681,374
Length adjustment: 111
Effective length of query: 705
Effective length of database: 14,008,606
Effective search space: 9876067230
Effective search space used: 9876067230
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-006973
         (2448 letters)

Database: RefSeq49_CP.fasta 
           33,336 sequences; 18,874,504 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_532060.2| PREDICTED: similar to tubulin, beta 5 [Canis fa...   830   0.0  
Alignment   gi|XP_848461.1| PREDICTED: similar to tubulin, beta, 2 isoform ...   823   0.0  
Alignment   gi|XP_533934.2| PREDICTED: similar to tubulin, beta 4 [Canis fa...   820   0.0  
Alignment   gi|XP_856242.1| PREDICTED: similar to tubulin, beta isoform 4 [...   816   0.0  
Alignment   gi|XP_848443.1| PREDICTED: similar to tubulin, beta isoform 1 [...   816   0.0  
Alignment   gi|XP_856209.1| PREDICTED: similar to tubulin, beta, 2 isoform ...   808   0.0  
Alignment   gi|XP_536745.1| PREDICTED: similar to tubulin, beta 3 isoform 1...   784   0.0  
Alignment   gi|XP_859971.1| PREDICTED: similar to tubulin, beta 3 isoform 2...   781   0.0  
Alignment   gi|XP_850030.1| PREDICTED: similar to tubulin, beta 6 isoform 2...   779   0.0  
Alignment   gi|XP_860049.1| PREDICTED: similar to tubulin, beta 3 isoform 4...   778   0.0  

>ref|XP_532060.2| PREDICTED: similar to tubulin, beta 5 [Canis familiaris].
          Length = 444

 Score =  830 bits (2145), Expect = 0.0
 Identities = 408/427 (95%), Positives = 408/427 (95%)
 Frame = +3

Query: 174  MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYV 353
            MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYV
Sbjct: 1    MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYV 60

Query: 354  PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 533
            PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 61   PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120

Query: 534  RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 713
            RKEAESCDCLQGFQ                   KIREEYPDRIMNTFSVVPSPKVSDTVV
Sbjct: 121  RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV 180

Query: 714  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 893
            EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
Sbjct: 181  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240

Query: 894  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMM 1073
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMM
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMM 300

Query: 1074 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 1253
            AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
Sbjct: 301  AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 360

Query: 1254 LKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 1433
            LKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361  LKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 1434 EYQQYQD 1454
            EYQQYQD
Sbjct: 421  EYQQYQD 427


>ref|XP_848461.1| PREDICTED: similar to tubulin, beta, 2 isoform 1 [Canis familiaris].
          Length = 445

 Score =  823 bits (2125), Expect = 0.0
 Identities = 401/427 (93%), Positives = 407/427 (95%)
 Frame = +3

Query: 174  MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYV 353
            MREIVH+QAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL+RI+VYYNEATGGKYV
Sbjct: 1    MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60

Query: 354  PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 533
            PRA+LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 61   PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120

Query: 534  RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 713
            RKEAESCDCLQGFQ                   KIREEYPDRIMNTFSVVPSPKVSDTVV
Sbjct: 121  RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV 180

Query: 714  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 893
            EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
Sbjct: 181  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240

Query: 894  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMM 1073
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQ+FDAKNMM
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 300

Query: 1074 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 1253
            AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
Sbjct: 301  AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 360

Query: 1254 LKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 1433
            LKM+ TFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361  LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 1434 EYQQYQD 1454
            EYQQYQD
Sbjct: 421  EYQQYQD 427


>ref|XP_533934.2| PREDICTED: similar to tubulin, beta 4 [Canis familiaris].
          Length = 576

 Score =  820 bits (2119), Expect = 0.0
 Identities = 411/481 (85%), Positives = 424/481 (88%), Gaps = 1/481 (0%)
 Frame = +3

Query: 15   PSCRRVRTSLLQPPGPVPSFQPATGSRENQNYLSFSCPVHTLRRAKRLE*ILT-MREIVH 191
            P  RR R     PP P P   P   +  +Q       P  ++R A       T MREIVH
Sbjct: 85   PRGRRDRAPPPPPPQPRPPGAPQLPAPSSQ------LPAPSIRAAAAAAPSATAMREIVH 138

Query: 192  IQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYVPRAILV 371
            +QAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL+RI+VYYNEATGG YVPRA+LV
Sbjct: 139  LQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGNYVPRAVLV 198

Query: 372  DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAES 551
            DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDVVRKEAES
Sbjct: 199  DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDAVLDVVRKEAES 258

Query: 552  CDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNAT 731
            CDCLQGFQ                   KIREE+PDRIMNTFSVVPSPKVSDTVVEPYNAT
Sbjct: 259  CDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTFSVVPSPKVSDTVVEPYNAT 318

Query: 732  LSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQL 911
            LSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQL
Sbjct: 319  LSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQL 378

Query: 912  NADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMMAACDPR 1091
            NADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQ+FDAKNMMAACDPR
Sbjct: 379  NADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPR 438

Query: 1092 HGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAVT 1271
            HGRYLTVAAVFRGRMSMKEVDEQML+VQ+KNSSYFVEWIPNNVKTAVCDIPPRGLKMA T
Sbjct: 439  HGRYLTVAAVFRGRMSMKEVDEQMLSVQSKNSSYFVEWIPNNVKTAVCDIPPRGLKMAAT 498

Query: 1272 FIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 1451
            FIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ
Sbjct: 499  FIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 558

Query: 1452 D 1454
            D
Sbjct: 559  D 559


>ref|XP_856242.1| PREDICTED: similar to tubulin, beta isoform 4 [Canis familiaris].
          Length = 445

 Score =  816 bits (2108), Expect = 0.0
 Identities = 397/427 (92%), Positives = 406/427 (95%)
 Frame = +3

Query: 174  MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYV 353
            MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTG+YHGDSDLQL+RI+VYYNEATG KYV
Sbjct: 1    MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEATGNKYV 60

Query: 354  PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 533
            PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 61   PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120

Query: 534  RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 713
            RKE+ESCDCLQGFQ                   KIREEYPDRIMNTFSV+PSPKVSDTVV
Sbjct: 121  RKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVV 180

Query: 714  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 893
            EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
Sbjct: 181  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240

Query: 894  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMM 1073
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQ+FD+KNMM
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMM 300

Query: 1074 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 1253
            AACDPRHGRYLTVAA+FRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
Sbjct: 301  AACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 360

Query: 1254 LKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 1433
            LKM+ TFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361  LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 1434 EYQQYQD 1454
            EYQQYQD
Sbjct: 421  EYQQYQD 427


>ref|XP_848443.1| PREDICTED: similar to tubulin, beta isoform 1 [Canis familiaris].
          Length = 445

 Score =  816 bits (2108), Expect = 0.0
 Identities = 397/427 (92%), Positives = 406/427 (95%)
 Frame = +3

Query: 174  MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYV 353
            MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTG+YHGDSDLQL+RI+VYYNEATG KYV
Sbjct: 1    MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEATGNKYV 60

Query: 354  PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 533
            PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 61   PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120

Query: 534  RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 713
            RKE+ESCDCLQGFQ                   KIREEYPDRIMNTFSV+PSPKVSDTVV
Sbjct: 121  RKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVV 180

Query: 714  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 893
            EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
Sbjct: 181  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240

Query: 894  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMM 1073
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQ+FD+KNMM
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMM 300

Query: 1074 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 1253
            AACDPRHGRYLTVAA+FRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
Sbjct: 301  AACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 360

Query: 1254 LKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 1433
            LKM+ TFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361  LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 1434 EYQQYQD 1454
            EYQQYQD
Sbjct: 421  EYQQYQD 427


>ref|XP_856209.1| PREDICTED: similar to tubulin, beta, 2 isoform 2 [Canis familiaris].
          Length = 472

 Score =  808 bits (2087), Expect = 0.0
 Identities = 401/454 (88%), Positives = 407/454 (89%), Gaps = 27/454 (5%)
 Frame = +3

Query: 174  MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATG---- 341
            MREIVH+QAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL+RI+VYYNEATG    
Sbjct: 1    MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGETPR 60

Query: 342  -----------------------GKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFG 452
                                   GKYVPRA+LVDLEPGTMDSVRSGPFGQIFRPDNFVFG
Sbjct: 61   PFLNYFCVPSALRSLTSPSLPLGGKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFG 120

Query: 453  QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXX 632
            QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQ                   
Sbjct: 121  QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLIS 180

Query: 633  KIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 812
            KIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR
Sbjct: 181  KIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 240

Query: 813  TLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPL 992
            TLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPL
Sbjct: 241  TLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPL 300

Query: 993  TSRGSQQYRALTVPELTQQVFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNV 1172
            TSRGSQQYRALTVPELTQQ+FDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNV
Sbjct: 301  TSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNV 360

Query: 1173 QNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAVTFIGNSTAIQELFKRISEQFTAMFRRKA 1352
            QNKNSSYFVEWIPNNVKTAVCDIPPRGLKM+ TFIGNSTAIQELFKRISEQFTAMFRRKA
Sbjct: 361  QNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKA 420

Query: 1353 FLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQD 1454
            FLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQD
Sbjct: 421  FLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQD 454


>ref|XP_536745.1| PREDICTED: similar to tubulin, beta 3 isoform 1 [Canis familiaris].
          Length = 450

 Score =  784 bits (2025), Expect = 0.0
 Identities = 382/427 (89%), Positives = 395/427 (92%)
 Frame = +3

Query: 174  MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYV 353
            MREIVHIQAGQCGNQIGAKFWEVISDEHGIDP+G Y GDSDLQL+RISVYYNEA+  KYV
Sbjct: 1    MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPSGNYVGDSDLQLERISVYYNEASSHKYV 60

Query: 354  PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 533
            PRAILVDLEPGTMDSVRSG FG +FRPDNF+FGQSGAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 61   PRAILVDLEPGTMDSVRSGAFGHLFRPDNFIFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120

Query: 534  RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 713
            RKE E+CDCLQGFQ                   K+REEYPDRIMNTFSVVPSPKVSDTVV
Sbjct: 121  RKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKVREEYPDRIMNTFSVVPSPKVSDTVV 180

Query: 714  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 893
            EPYNATLS+HQLVENTDETYCIDNEALYDICFRTLKL TPTYGDLNHLVSATMSGVTT L
Sbjct: 181  EPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKLATPTYGDLNHLVSATMSGVTTSL 240

Query: 894  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMM 1073
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT+RGSQQYRALTVPELTQQ+FDAKNMM
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMM 300

Query: 1074 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 1253
            AACDPRHGRYLTVA VFRGRMSMKEVDEQML +Q+KNSSYFVEWIPNNVK AVCDIPPRG
Sbjct: 301  AACDPRHGRYLTVATVFRGRMSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVCDIPPRG 360

Query: 1254 LKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 1433
            LKM+ TFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361  LKMSSTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 1434 EYQQYQD 1454
            EYQQYQD
Sbjct: 421  EYQQYQD 427


>ref|XP_859971.1| PREDICTED: similar to tubulin, beta 3 isoform 2 [Canis familiaris].
          Length = 453

 Score =  781 bits (2016), Expect = 0.0
 Identities = 382/430 (88%), Positives = 396/430 (92%), Gaps = 3/430 (0%)
 Frame = +3

Query: 174  MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEAT---GG 344
            MREIVHIQAGQCGNQIGAKFWEVISDEHGIDP+G Y GDSDLQL+RISVYYNEA+   G 
Sbjct: 1    MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPSGNYVGDSDLQLERISVYYNEASSRGGS 60

Query: 345  KYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL 524
            +YVPRAILVDLEPGTMDSVRSG FG +FRPDNF+FGQSGAGNNWAKGHYTEGAELVDSVL
Sbjct: 61   RYVPRAILVDLEPGTMDSVRSGAFGHLFRPDNFIFGQSGAGNNWAKGHYTEGAELVDSVL 120

Query: 525  DVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSD 704
            DVVRKE E+CDCLQGFQ                   K+REEYPDRIMNTFSVVPSPKVSD
Sbjct: 121  DVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKVREEYPDRIMNTFSVVPSPKVSD 180

Query: 705  TVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVT 884
            TVVEPYNATLS+HQLVENTDETYCIDNEALYDICFRTLKL TPTYGDLNHLVSATMSGVT
Sbjct: 181  TVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKLATPTYGDLNHLVSATMSGVT 240

Query: 885  TCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAK 1064
            T LRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT+RGSQQYRALTVPELTQQ+FDAK
Sbjct: 241  TSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAK 300

Query: 1065 NMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIP 1244
            NMMAACDPRHGRYLTVA VFRGRMSMKEVDEQML +Q+KNSSYFVEWIPNNVK AVCDIP
Sbjct: 301  NMMAACDPRHGRYLTVATVFRGRMSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVCDIP 360

Query: 1245 PRGLKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND 1424
            PRGLKM+ TFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND
Sbjct: 361  PRGLKMSSTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND 420

Query: 1425 LVSEYQQYQD 1454
            LVSEYQQYQD
Sbjct: 421  LVSEYQQYQD 430


>ref|XP_850030.1| PREDICTED: similar to tubulin, beta 6 isoform 2 [Canis familiaris].
          Length = 446

 Score =  779 bits (2012), Expect = 0.0
 Identities = 380/427 (88%), Positives = 394/427 (92%)
 Frame = +3

Query: 174  MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYV 353
            MREIVHIQAGQCGNQIG KFWEVISDEHGIDP G Y GDS LQL+RI+VYYNE++ GKYV
Sbjct: 1    MREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGGYVGDSALQLERINVYYNESSCGKYV 60

Query: 354  PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 533
            PRA LVDLEPGTMDSVRSGPFGQ+FRPDNF+FGQ+GAGNNWAKGHYTEGAELVD+VLDVV
Sbjct: 61   PRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELVDAVLDVV 120

Query: 534  RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 713
            RKE E CDCLQGFQ                   KIREEYPDRIMNTFSV+PSPKVSDTVV
Sbjct: 121  RKECEHCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVV 180

Query: 714  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 893
            EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT L
Sbjct: 181  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSL 240

Query: 894  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMM 1073
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT+RGSQQYRALTVPELTQQ+FDAKNMM
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMM 300

Query: 1074 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 1253
            AACDPRHGRYLTVAAVFRG MSMKEVDEQML +QNKNSSYFVEWIPNNVK AVCDIPPRG
Sbjct: 301  AACDPRHGRYLTVAAVFRGPMSMKEVDEQMLAIQNKNSSYFVEWIPNNVKVAVCDIPPRG 360

Query: 1254 LKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 1433
            LKMA TFIGNSTAIQELFKRISEQF+AMFRRKAFLHW+TGEGMDEMEFTEAESNMNDLVS
Sbjct: 361  LKMAATFIGNSTAIQELFKRISEQFSAMFRRKAFLHWFTGEGMDEMEFTEAESNMNDLVS 420

Query: 1434 EYQQYQD 1454
            EYQQYQD
Sbjct: 421  EYQQYQD 427


>ref|XP_860049.1| PREDICTED: similar to tubulin, beta 3 isoform 4 [Canis familiaris].
          Length = 456

 Score =  778 bits (2008), Expect = 0.0
 Identities = 382/433 (88%), Positives = 395/433 (91%), Gaps = 6/433 (1%)
 Frame = +3

Query: 174  MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATG---- 341
            MREIVHIQAGQCGNQIGAKFWEVISDEHGIDP+G Y GDSDLQL+RISVYYNEA+     
Sbjct: 1    MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPSGNYVGDSDLQLERISVYYNEASSISIK 60

Query: 342  --GKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 515
               KYVPRAILVDLEPGTMDSVRSG FG +FRPDNF+FGQSGAGNNWAKGHYTEGAELVD
Sbjct: 61   QSHKYVPRAILVDLEPGTMDSVRSGAFGHLFRPDNFIFGQSGAGNNWAKGHYTEGAELVD 120

Query: 516  SVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPK 695
            SVLDVVRKE E+CDCLQGFQ                   K+REEYPDRIMNTFSVVPSPK
Sbjct: 121  SVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKVREEYPDRIMNTFSVVPSPK 180

Query: 696  VSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMS 875
            VSDTVVEPYNATLS+HQLVENTDETYCIDNEALYDICFRTLKL TPTYGDLNHLVSATMS
Sbjct: 181  VSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKLATPTYGDLNHLVSATMS 240

Query: 876  GVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVF 1055
            GVTT LRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT+RGSQQYRALTVPELTQQ+F
Sbjct: 241  GVTTSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMF 300

Query: 1056 DAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVC 1235
            DAKNMMAACDPRHGRYLTVA VFRGRMSMKEVDEQML +Q+KNSSYFVEWIPNNVK AVC
Sbjct: 301  DAKNMMAACDPRHGRYLTVATVFRGRMSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVC 360

Query: 1236 DIPPRGLKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESN 1415
            DIPPRGLKM+ TFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESN
Sbjct: 361  DIPPRGLKMSSTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESN 420

Query: 1416 MNDLVSEYQQYQD 1454
            MNDLVSEYQQYQD
Sbjct: 421  MNDLVSEYQQYQD 433


  Database: RefSeq49_CP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,874,504
  Number of sequences in database:  33,336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 103,474,592
Number of extensions: 3115124
Number of successful extensions: 11122
Number of sequences better than 1.0e-05: 108
Number of HSP's gapped: 10921
Number of HSP's successfully gapped: 125
Length of query: 816
Length of database: 18,874,504
Length adjustment: 111
Effective length of query: 705
Effective length of database: 15,174,208
Effective search space: 10697816640
Effective search space used: 10697816640
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-006973
         (2448 letters)

Database: RefSeq49_HP.fasta 
           32,964 sequences; 18,297,164 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_821133.1| tubulin beta chain [Homo sapiens].                   830   0.0  
Alignment   gi|NP_006079.1| tubulin beta-2C chain [Homo sapiens].                823   0.0  
Alignment   gi|NP_821080.1| tubulin beta-2B chain [Homo sapiens].                816   0.0  
Alignment   gi|NP_006078.2| tubulin beta-4 chain [Homo sapiens].                 815   0.0  
Alignment   gi|NP_001060.1| tubulin beta-2A chain [Homo sapiens].                810   0.0  
Alignment   gi|NP_006077.2| tubulin beta-3 chain isoform 1 [Homo sapiens].       784   0.0  
Alignment   gi|NP_115914.1| tubulin beta-6 chain [Homo sapiens].                 771   0.0  
Alignment   gi|NP_817124.1| tubulin beta-8 chain isoform 1 [Homo sapiens].       766   0.0  
Alignment   gi|NP_110400.1| tubulin beta-1 chain [Homo sapiens].                 681   0.0  
Alignment   gi|NP_001184110.1| tubulin beta-3 chain isoform 2 [Homo sapiens].    651   0.0  

>ref|NP_821133.1| tubulin beta chain [Homo sapiens].
          Length = 444

 Score =  830 bits (2145), Expect = 0.0
 Identities = 408/427 (95%), Positives = 408/427 (95%)
 Frame = +3

Query: 174  MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYV 353
            MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYV
Sbjct: 1    MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYV 60

Query: 354  PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 533
            PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 61   PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120

Query: 534  RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 713
            RKEAESCDCLQGFQ                   KIREEYPDRIMNTFSVVPSPKVSDTVV
Sbjct: 121  RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV 180

Query: 714  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 893
            EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
Sbjct: 181  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240

Query: 894  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMM 1073
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMM
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMM 300

Query: 1074 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 1253
            AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
Sbjct: 301  AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 360

Query: 1254 LKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 1433
            LKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361  LKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 1434 EYQQYQD 1454
            EYQQYQD
Sbjct: 421  EYQQYQD 427


>ref|NP_006079.1| tubulin beta-2C chain [Homo sapiens].
          Length = 445

 Score =  823 bits (2125), Expect = 0.0
 Identities = 401/427 (93%), Positives = 407/427 (95%)
 Frame = +3

Query: 174  MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYV 353
            MREIVH+QAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL+RI+VYYNEATGGKYV
Sbjct: 1    MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60

Query: 354  PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 533
            PRA+LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 61   PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120

Query: 534  RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 713
            RKEAESCDCLQGFQ                   KIREEYPDRIMNTFSVVPSPKVSDTVV
Sbjct: 121  RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV 180

Query: 714  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 893
            EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
Sbjct: 181  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240

Query: 894  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMM 1073
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQ+FDAKNMM
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 300

Query: 1074 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 1253
            AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
Sbjct: 301  AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 360

Query: 1254 LKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 1433
            LKM+ TFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361  LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 1434 EYQQYQD 1454
            EYQQYQD
Sbjct: 421  EYQQYQD 427


>ref|NP_821080.1| tubulin beta-2B chain [Homo sapiens].
          Length = 445

 Score =  816 bits (2108), Expect = 0.0
 Identities = 397/427 (92%), Positives = 406/427 (95%)
 Frame = +3

Query: 174  MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYV 353
            MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTG+YHGDSDLQL+RI+VYYNEATG KYV
Sbjct: 1    MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEATGNKYV 60

Query: 354  PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 533
            PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 61   PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120

Query: 534  RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 713
            RKE+ESCDCLQGFQ                   KIREEYPDRIMNTFSV+PSPKVSDTVV
Sbjct: 121  RKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVV 180

Query: 714  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 893
            EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
Sbjct: 181  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240

Query: 894  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMM 1073
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQ+FD+KNMM
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMM 300

Query: 1074 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 1253
            AACDPRHGRYLTVAA+FRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
Sbjct: 301  AACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 360

Query: 1254 LKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 1433
            LKM+ TFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361  LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 1434 EYQQYQD 1454
            EYQQYQD
Sbjct: 421  EYQQYQD 427


>ref|NP_006078.2| tubulin beta-4 chain [Homo sapiens].
          Length = 444

 Score =  815 bits (2106), Expect = 0.0
 Identities = 397/427 (92%), Positives = 406/427 (95%)
 Frame = +3

Query: 174  MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYV 353
            MREIVH+QAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL+RI+VYYNEATGG YV
Sbjct: 1    MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGNYV 60

Query: 354  PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 533
            PRA+LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDVV
Sbjct: 61   PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDAVLDVV 120

Query: 534  RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 713
            RKEAESCDCLQGFQ                   KIREE+PDRIMNTFSVVPSPKVSDTVV
Sbjct: 121  RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTFSVVPSPKVSDTVV 180

Query: 714  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 893
            EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
Sbjct: 181  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240

Query: 894  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMM 1073
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQ+FDAKNMM
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 300

Query: 1074 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 1253
            AACDPRHGRYLTVAAVFRGRMSMKEVDEQML+VQ+KNSSYFVEWIPNNVKTAVCDIPPRG
Sbjct: 301  AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLSVQSKNSSYFVEWIPNNVKTAVCDIPPRG 360

Query: 1254 LKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 1433
            LKMA TFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361  LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 1434 EYQQYQD 1454
            EYQQYQD
Sbjct: 421  EYQQYQD 427


>ref|NP_001060.1| tubulin beta-2A chain [Homo sapiens].
          Length = 445

 Score =  810 bits (2093), Expect = 0.0
 Identities = 395/427 (92%), Positives = 404/427 (94%)
 Frame = +3

Query: 174  MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYV 353
            MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTG+YHGDSDLQL+RI+VYYNEA G KYV
Sbjct: 1    MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEAAGNKYV 60

Query: 354  PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 533
            PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 61   PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120

Query: 534  RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 713
            RKE+ESCDCLQGFQ                   KIREEYPDRIMNTFSV+PSPKVSDTVV
Sbjct: 121  RKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVV 180

Query: 714  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 893
            EPYNATLSVHQLVENTDETY IDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
Sbjct: 181  EPYNATLSVHQLVENTDETYSIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240

Query: 894  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMM 1073
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQ+FD+KNMM
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMM 300

Query: 1074 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 1253
            AACDPRHGRYLTVAA+FRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
Sbjct: 301  AACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 360

Query: 1254 LKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 1433
            LKM+ TFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361  LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 1434 EYQQYQD 1454
            EYQQYQD
Sbjct: 421  EYQQYQD 427


>ref|NP_006077.2| tubulin beta-3 chain isoform 1 [Homo sapiens].
          Length = 450

 Score =  784 bits (2025), Expect = 0.0
 Identities = 382/427 (89%), Positives = 395/427 (92%)
 Frame = +3

Query: 174  MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYV 353
            MREIVHIQAGQCGNQIGAKFWEVISDEHGIDP+G Y GDSDLQL+RISVYYNEA+  KYV
Sbjct: 1    MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPSGNYVGDSDLQLERISVYYNEASSHKYV 60

Query: 354  PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 533
            PRAILVDLEPGTMDSVRSG FG +FRPDNF+FGQSGAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 61   PRAILVDLEPGTMDSVRSGAFGHLFRPDNFIFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120

Query: 534  RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 713
            RKE E+CDCLQGFQ                   K+REEYPDRIMNTFSVVPSPKVSDTVV
Sbjct: 121  RKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKVREEYPDRIMNTFSVVPSPKVSDTVV 180

Query: 714  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 893
            EPYNATLS+HQLVENTDETYCIDNEALYDICFRTLKL TPTYGDLNHLVSATMSGVTT L
Sbjct: 181  EPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKLATPTYGDLNHLVSATMSGVTTSL 240

Query: 894  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMM 1073
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT+RGSQQYRALTVPELTQQ+FDAKNMM
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMM 300

Query: 1074 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 1253
            AACDPRHGRYLTVA VFRGRMSMKEVDEQML +Q+KNSSYFVEWIPNNVK AVCDIPPRG
Sbjct: 301  AACDPRHGRYLTVATVFRGRMSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVCDIPPRG 360

Query: 1254 LKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 1433
            LKM+ TFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361  LKMSSTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 1434 EYQQYQD 1454
            EYQQYQD
Sbjct: 421  EYQQYQD 427


>ref|NP_115914.1| tubulin beta-6 chain [Homo sapiens].
          Length = 446

 Score =  771 bits (1992), Expect = 0.0
 Identities = 376/427 (88%), Positives = 392/427 (91%)
 Frame = +3

Query: 174  MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYV 353
            MREIVHIQAGQCGNQIG KFWEVISDEHGIDP G Y GDS LQL+RI+VYYNE++  KYV
Sbjct: 1    MREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGGYVGDSALQLERINVYYNESSSQKYV 60

Query: 354  PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 533
            PRA LVDLEPGTMDSVRSGPFGQ+FRPDNF+FGQ+GAGNNWAKGHYTEGAELVD+VLDVV
Sbjct: 61   PRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELVDAVLDVV 120

Query: 534  RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 713
            RKE E CDCLQGFQ                   KIREE+PDRIMNTFSV+PSPKVSDTVV
Sbjct: 121  RKECEHCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTFSVMPSPKVSDTVV 180

Query: 714  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 893
            EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT L
Sbjct: 181  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSL 240

Query: 894  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMM 1073
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQ+FDA+NMM
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDARNMM 300

Query: 1074 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 1253
            AACDPRHGRYLTVA VFRG MSMKEVDEQML +Q+KNSSYFVEWIPNNVK AVCDIPPRG
Sbjct: 301  AACDPRHGRYLTVATVFRGPMSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVCDIPPRG 360

Query: 1254 LKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 1433
            LKMA TFIGNSTAIQELFKRISEQF+AMFRRKAFLHW+TGEGMDEMEFTEAESNMNDLVS
Sbjct: 361  LKMASTFIGNSTAIQELFKRISEQFSAMFRRKAFLHWFTGEGMDEMEFTEAESNMNDLVS 420

Query: 1434 EYQQYQD 1454
            EYQQYQD
Sbjct: 421  EYQQYQD 427


>ref|NP_817124.1| tubulin beta-8 chain isoform 1 [Homo sapiens].
          Length = 444

 Score =  766 bits (1978), Expect = 0.0
 Identities = 365/427 (85%), Positives = 391/427 (91%)
 Frame = +3

Query: 174  MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYV 353
            MREIV  Q GQCGNQIGAKFWEVISDEH ID  GTYHGDS LQL+RI+VYYNEA+GG+YV
Sbjct: 1    MREIVLTQIGQCGNQIGAKFWEVISDEHAIDSAGTYHGDSHLQLERINVYYNEASGGRYV 60

Query: 354  PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 533
            PRA+LVDLEPGTMDSVRSGPFGQ+FRPDNF+FGQ GAGNNWAKGHYTEGAEL++SV+DVV
Sbjct: 61   PRAVLVDLEPGTMDSVRSGPFGQVFRPDNFIFGQCGAGNNWAKGHYTEGAELMESVMDVV 120

Query: 534  RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 713
            RKEAESCDCLQGFQ                   KIREEYPDRI+NTFS++PSPKVSDTVV
Sbjct: 121  RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLLSKIREEYPDRIINTFSILPSPKVSDTVV 180

Query: 714  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 893
            EPYNATLSVHQL+EN DET+CIDNEALYDIC +TLKL TPTYGDLNHLVSATMSGVTTCL
Sbjct: 181  EPYNATLSVHQLIENADETFCIDNEALYDICSKTLKLPTPTYGDLNHLVSATMSGVTTCL 240

Query: 894  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMM 1073
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTV ELTQQ+FDAKNMM
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVAELTQQMFDAKNMM 300

Query: 1074 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 1253
            AACDPRHGRYLT AA+FRGRM M+EVDEQM N+Q+KNSSYF +W+PNNVKTAVCDIPPRG
Sbjct: 301  AACDPRHGRYLTAAAIFRGRMPMREVDEQMFNIQDKNSSYFADWLPNNVKTAVCDIPPRG 360

Query: 1254 LKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 1433
            LKM+ TFIGN+TAIQELFKR+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361  LKMSATFIGNNTAIQELFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 1434 EYQQYQD 1454
            EYQQYQD
Sbjct: 421  EYQQYQD 427


>ref|NP_110400.1| tubulin beta-1 chain [Homo sapiens].
          Length = 451

 Score =  681 bits (1758), Expect = 0.0
 Identities = 327/427 (76%), Positives = 368/427 (86%)
 Frame = +3

Query: 174  MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYV 353
            MREIVHIQ GQCGNQIGAKFWE+I +EHGID  G+  G S LQL+RISVYYNEA G KYV
Sbjct: 1    MREIVHIQIGQCGNQIGAKFWEMIGEEHGIDLAGSDRGASALQLERISVYYNEAYGRKYV 60

Query: 354  PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 533
            PRA+LVDLEPGTMDS+RS   G +F+PD+FV G SGAGNNWAKGHYTEGAEL+++VL+VV
Sbjct: 61   PRAVLVDLEPGTMDSIRSSKLGALFQPDSFVHGNSGAGNNWAKGHYTEGAELIENVLEVV 120

Query: 534  RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 713
            R E+ESCDCLQGFQ                   KIREEYPDRIMN+FSV+PSPKVSDTVV
Sbjct: 121  RHESESCDCLQGFQIVHSLGGGTGSGMGTLLMNKIREEYPDRIMNSFSVMPSPKVSDTVV 180

Query: 714  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 893
            EPYNA LS+HQL+EN D  +CIDNEALYDICFRTLKLTTPTYGDLNHLVS TMSG+TT L
Sbjct: 181  EPYNAVLSIHQLIENADACFCIDNEALYDICFRTLKLTTPTYGDLNHLVSLTMSGITTSL 240

Query: 894  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMM 1073
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT++GSQQYRAL+V ELTQQ+FDA+N M
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTAQGSQQYRALSVAELTQQMFDARNTM 300

Query: 1074 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 1253
            AACD R GRYLTVA +FRG+MS KEVD+Q+L+VQ +NSS FVEWIPNNVK AVCDIPPRG
Sbjct: 301  AACDLRRGRYLTVACIFRGKMSTKEVDQQLLSVQTRNSSCFVEWIPNNVKVAVCDIPPRG 360

Query: 1254 LKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 1433
            L MA TFIGN+TAIQE+F R+SE F+AMF+RKAF+HWYT EGMD  EF EAE+N++DLVS
Sbjct: 361  LSMAATFIGNNTAIQEIFNRVSEHFSAMFKRKAFVHWYTSEGMDINEFGEAENNIHDLVS 420

Query: 1434 EYQQYQD 1454
            EYQQ+QD
Sbjct: 421  EYQQFQD 427


>ref|NP_001184110.1| tubulin beta-3 chain isoform 2 [Homo sapiens].
          Length = 378

 Score =  651 bits (1679), Expect = 0.0
 Identities = 317/355 (89%), Positives = 327/355 (92%)
 Frame = +3

Query: 390  MDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 569
            MDSVRSG FG +FRPDNF+FGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE E+CDCLQG
Sbjct: 1    MDSVRSGAFGHLFRPDNFIFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKECENCDCLQG 60

Query: 570  FQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQL 749
            FQ                   K+REEYPDRIMNTFSVVPSPKVSDTVVEPYNATLS+HQL
Sbjct: 61   FQLTHSLGGGTGSGMGTLLISKVREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSIHQL 120

Query: 750  VENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRK 929
            VENTDETYCIDNEALYDICFRTLKL TPTYGDLNHLVSATMSGVTT LRFPGQLNADLRK
Sbjct: 121  VENTDETYCIDNEALYDICFRTLKLATPTYGDLNHLVSATMSGVTTSLRFPGQLNADLRK 180

Query: 930  LAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMMAACDPRHGRYLT 1109
            LAVNMVPFPRLHFFMPGFAPLT+RGSQQYRALTVPELTQQ+FDAKNMMAACDPRHGRYLT
Sbjct: 181  LAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLT 240

Query: 1110 VAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAVTFIGNST 1289
            VA VFRGRMSMKEVDEQML +Q+KNSSYFVEWIPNNVK AVCDIPPRGLKM+ TFIGNST
Sbjct: 241  VATVFRGRMSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVCDIPPRGLKMSSTFIGNST 300

Query: 1290 AIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQD 1454
            AIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQD
Sbjct: 301  AIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQD 355


  Database: RefSeq49_HP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,297,164
  Number of sequences in database:  32,964
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 101,133,693
Number of extensions: 3033429
Number of successful extensions: 10311
Number of sequences better than 1.0e-05: 28
Number of HSP's gapped: 10223
Number of HSP's successfully gapped: 28
Length of query: 816
Length of database: 18,297,164
Length adjustment: 111
Effective length of query: 705
Effective length of database: 14,638,160
Effective search space: 10319902800
Effective search space used: 10319902800
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-006973
         (2448 letters)

Database: RefSeq49_MP.fasta 
           30,036 sequences; 15,617,559 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_035785.1| tubulin beta-5 chain [Mus musculus].                 830   0.0  
Alignment   gi|NP_666228.1| tubulin beta-2C chain [Mus musculus].                823   0.0  
Alignment   gi|NP_076205.1| tubulin beta-2B chain [Mus musculus].                816   0.0  
Alignment   gi|NP_033477.2| tubulin beta-4 chain [Mus musculus].                 815   0.0  
Alignment   gi|NP_033476.1| tubulin beta-2A chain [Mus musculus].                810   0.0  
Alignment   gi|NP_075768.1| tubulin beta-3 chain [Mus musculus].                 784   0.0  
Alignment   gi|NP_080749.2| tubulin beta-6 chain [Mus musculus].                 774   0.0  
Alignment   gi|XP_003086598.1| PREDICTED: tubulin beta-3 chain-like [Mus mu...   734   0.0  
Alignment   gi|XP_003084702.1| PREDICTED: tubulin beta-3 chain-like [Mus mu...   731   0.0  
Alignment   gi|NP_001074440.1| tubulin, beta 1 [Mus musculus].                   689   0.0  

>ref|NP_035785.1| tubulin beta-5 chain [Mus musculus].
          Length = 444

 Score =  830 bits (2145), Expect = 0.0
 Identities = 408/427 (95%), Positives = 408/427 (95%)
 Frame = +3

Query: 174  MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYV 353
            MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYV
Sbjct: 1    MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYV 60

Query: 354  PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 533
            PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 61   PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120

Query: 534  RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 713
            RKEAESCDCLQGFQ                   KIREEYPDRIMNTFSVVPSPKVSDTVV
Sbjct: 121  RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV 180

Query: 714  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 893
            EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
Sbjct: 181  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240

Query: 894  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMM 1073
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMM
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMM 300

Query: 1074 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 1253
            AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
Sbjct: 301  AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 360

Query: 1254 LKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 1433
            LKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361  LKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 1434 EYQQYQD 1454
            EYQQYQD
Sbjct: 421  EYQQYQD 427


>ref|NP_666228.1| tubulin beta-2C chain [Mus musculus].
          Length = 445

 Score =  823 bits (2125), Expect = 0.0
 Identities = 401/427 (93%), Positives = 407/427 (95%)
 Frame = +3

Query: 174  MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYV 353
            MREIVH+QAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL+RI+VYYNEATGGKYV
Sbjct: 1    MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60

Query: 354  PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 533
            PRA+LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 61   PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120

Query: 534  RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 713
            RKEAESCDCLQGFQ                   KIREEYPDRIMNTFSVVPSPKVSDTVV
Sbjct: 121  RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV 180

Query: 714  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 893
            EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
Sbjct: 181  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240

Query: 894  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMM 1073
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQ+FDAKNMM
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 300

Query: 1074 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 1253
            AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
Sbjct: 301  AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 360

Query: 1254 LKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 1433
            LKM+ TFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361  LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 1434 EYQQYQD 1454
            EYQQYQD
Sbjct: 421  EYQQYQD 427


>ref|NP_076205.1| tubulin beta-2B chain [Mus musculus].
          Length = 445

 Score =  816 bits (2108), Expect = 0.0
 Identities = 397/427 (92%), Positives = 406/427 (95%)
 Frame = +3

Query: 174  MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYV 353
            MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTG+YHGDSDLQL+RI+VYYNEATG KYV
Sbjct: 1    MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEATGNKYV 60

Query: 354  PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 533
            PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 61   PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120

Query: 534  RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 713
            RKE+ESCDCLQGFQ                   KIREEYPDRIMNTFSV+PSPKVSDTVV
Sbjct: 121  RKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVV 180

Query: 714  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 893
            EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
Sbjct: 181  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240

Query: 894  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMM 1073
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQ+FD+KNMM
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMM 300

Query: 1074 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 1253
            AACDPRHGRYLTVAA+FRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
Sbjct: 301  AACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 360

Query: 1254 LKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 1433
            LKM+ TFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361  LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 1434 EYQQYQD 1454
            EYQQYQD
Sbjct: 421  EYQQYQD 427


>ref|NP_033477.2| tubulin beta-4 chain [Mus musculus].
          Length = 444

 Score =  815 bits (2106), Expect = 0.0
 Identities = 397/427 (92%), Positives = 406/427 (95%)
 Frame = +3

Query: 174  MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYV 353
            MREIVH+QAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL+RI+VYYNEATGG YV
Sbjct: 1    MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGNYV 60

Query: 354  PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 533
            PRA+LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDVV
Sbjct: 61   PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDAVLDVV 120

Query: 534  RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 713
            RKEAESCDCLQGFQ                   KIREE+PDRIMNTFSVVPSPKVSDTVV
Sbjct: 121  RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTFSVVPSPKVSDTVV 180

Query: 714  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 893
            EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
Sbjct: 181  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240

Query: 894  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMM 1073
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQ+FDAKNMM
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 300

Query: 1074 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 1253
            AACDPRHGRYLTVAAVFRGRMSMKEVDEQML+VQ+KNSSYFVEWIPNNVKTAVCDIPPRG
Sbjct: 301  AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLSVQSKNSSYFVEWIPNNVKTAVCDIPPRG 360

Query: 1254 LKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 1433
            LKMA TFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361  LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 1434 EYQQYQD 1454
            EYQQYQD
Sbjct: 421  EYQQYQD 427


>ref|NP_033476.1| tubulin beta-2A chain [Mus musculus].
          Length = 445

 Score =  810 bits (2093), Expect = 0.0
 Identities = 395/427 (92%), Positives = 404/427 (94%)
 Frame = +3

Query: 174  MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYV 353
            MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTG+YHGDSDLQL+RI+VYYNEA G KYV
Sbjct: 1    MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEAAGNKYV 60

Query: 354  PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 533
            PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 61   PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120

Query: 534  RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 713
            RKE+ESCDCLQGFQ                   KIREEYPDRIMNTFSV+PSPKVSDTVV
Sbjct: 121  RKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVV 180

Query: 714  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 893
            EPYNATLSVHQLVENTDETY IDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
Sbjct: 181  EPYNATLSVHQLVENTDETYSIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240

Query: 894  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMM 1073
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQ+FD+KNMM
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMM 300

Query: 1074 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 1253
            AACDPRHGRYLTVAA+FRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
Sbjct: 301  AACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 360

Query: 1254 LKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 1433
            LKM+ TFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361  LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 1434 EYQQYQD 1454
            EYQQYQD
Sbjct: 421  EYQQYQD 427


>ref|NP_075768.1| tubulin beta-3 chain [Mus musculus].
          Length = 450

 Score =  784 bits (2025), Expect = 0.0
 Identities = 382/427 (89%), Positives = 395/427 (92%)
 Frame = +3

Query: 174  MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYV 353
            MREIVHIQAGQCGNQIGAKFWEVISDEHGIDP+G Y GDSDLQL+RISVYYNEA+  KYV
Sbjct: 1    MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPSGNYVGDSDLQLERISVYYNEASSHKYV 60

Query: 354  PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 533
            PRAILVDLEPGTMDSVRSG FG +FRPDNF+FGQSGAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 61   PRAILVDLEPGTMDSVRSGAFGHLFRPDNFIFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120

Query: 534  RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 713
            RKE E+CDCLQGFQ                   K+REEYPDRIMNTFSVVPSPKVSDTVV
Sbjct: 121  RKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKVREEYPDRIMNTFSVVPSPKVSDTVV 180

Query: 714  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 893
            EPYNATLS+HQLVENTDETYCIDNEALYDICFRTLKL TPTYGDLNHLVSATMSGVTT L
Sbjct: 181  EPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKLATPTYGDLNHLVSATMSGVTTSL 240

Query: 894  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMM 1073
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT+RGSQQYRALTVPELTQQ+FDAKNMM
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMM 300

Query: 1074 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 1253
            AACDPRHGRYLTVA VFRGRMSMKEVDEQML +Q+KNSSYFVEWIPNNVK AVCDIPPRG
Sbjct: 301  AACDPRHGRYLTVATVFRGRMSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVCDIPPRG 360

Query: 1254 LKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 1433
            LKM+ TFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361  LKMSSTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 1434 EYQQYQD 1454
            EYQQYQD
Sbjct: 421  EYQQYQD 427


>ref|NP_080749.2| tubulin beta-6 chain [Mus musculus].
          Length = 447

 Score =  774 bits (1999), Expect = 0.0
 Identities = 379/427 (88%), Positives = 391/427 (91%)
 Frame = +3

Query: 174  MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYV 353
            MREIVHIQAGQCGNQIG KFWEVISDEHGID  G Y GDS LQL+RISVYYNE++  KYV
Sbjct: 1    MREIVHIQAGQCGNQIGTKFWEVISDEHGIDQAGGYVGDSALQLERISVYYNESSSKKYV 60

Query: 354  PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 533
            PRA LVDLEPGTMDSVRSGPFGQ+FRPDNF+FGQ+GAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 61   PRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELVDSVLDVV 120

Query: 534  RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 713
            RKE E CDCLQGFQ                   KIREEYPDRIMNTFSV+PSPKVSDTVV
Sbjct: 121  RKECEHCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVV 180

Query: 714  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 893
            EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT L
Sbjct: 181  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSL 240

Query: 894  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMM 1073
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT+RGSQQYRALTVPELTQQ+FDAKNMM
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMM 300

Query: 1074 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 1253
            AACDPRHGRYLTVA VFRG MSMKEVDEQML +QNKNSSYFVEWIPNNVK AVCDIPPRG
Sbjct: 301  AACDPRHGRYLTVATVFRGPMSMKEVDEQMLAIQNKNSSYFVEWIPNNVKVAVCDIPPRG 360

Query: 1254 LKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 1433
            LKMA TFIGNSTAIQELFKRISEQF+AMFRRKAFLHW+TGEGMDEMEFTEAESNMNDLVS
Sbjct: 361  LKMASTFIGNSTAIQELFKRISEQFSAMFRRKAFLHWFTGEGMDEMEFTEAESNMNDLVS 420

Query: 1434 EYQQYQD 1454
            EYQQYQD
Sbjct: 421  EYQQYQD 427


>ref|XP_003086598.1| PREDICTED: tubulin beta-3 chain-like [Mus musculus].
          Length = 443

 Score =  734 bits (1894), Expect = 0.0
 Identities = 360/427 (84%), Positives = 380/427 (88%)
 Frame = +3

Query: 174  MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYV 353
            MREIVHIQAGQCGNQIGAKFWEVISD+HGIDP+G Y GDSDLQL+RIS+YYNEA+  KYV
Sbjct: 1    MREIVHIQAGQCGNQIGAKFWEVISDDHGIDPSGNYVGDSDLQLERISMYYNEASSHKYV 60

Query: 354  PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 533
            PRAI V LEPGTMDSVRSG FG +FRPDNF+F QSG GNNWAKGHY EGAEL DSVLDVV
Sbjct: 61   PRAIRVYLEPGTMDSVRSGAFGHLFRPDNFIFDQSGTGNNWAKGHYREGAELEDSVLDVV 120

Query: 534  RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 713
            +K+ E+CDCLQGFQ                   K+REEYPDRIMNTFSVVPSPKVSDTVV
Sbjct: 121  QKQCENCDCLQGFQLTHSLGGGTLLIS------KVREEYPDRIMNTFSVVPSPKVSDTVV 174

Query: 714  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 893
            EPYNATLS+HQLVEN DETYCIDNEALY ICFRT+KL TPT+GDLNHLVSATMSGVTT L
Sbjct: 175  EPYNATLSIHQLVENMDETYCIDNEALYYICFRTVKLATPTHGDLNHLVSATMSGVTTSL 234

Query: 894  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMM 1073
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGF PLT+RGSQQYRALTVPELTQQ+FDAKNMM
Sbjct: 235  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFTPLTARGSQQYRALTVPELTQQMFDAKNMM 294

Query: 1074 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 1253
            AACDP HGRYLTVA VFRGRMSMKEVDEQML +Q+KNSSY VEWIPNNV  AVCDIPPRG
Sbjct: 295  AACDPHHGRYLTVATVFRGRMSMKEVDEQMLAIQSKNSSYLVEWIPNNVNVAVCDIPPRG 354

Query: 1254 LKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 1433
            LKM+ TFIGNSTAIQELFK ISEQFTAMFR KAFLHWYTGEGMDE+EFTEAESNMNDLV 
Sbjct: 355  LKMSSTFIGNSTAIQELFKCISEQFTAMFRCKAFLHWYTGEGMDEIEFTEAESNMNDLVF 414

Query: 1434 EYQQYQD 1454
            EYQQYQD
Sbjct: 415  EYQQYQD 421


>ref|XP_003084702.1| PREDICTED: tubulin beta-3 chain-like [Mus musculus].
          Length = 443

 Score =  731 bits (1886), Expect = 0.0
 Identities = 358/427 (83%), Positives = 379/427 (88%)
 Frame = +3

Query: 174  MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYV 353
            MREIVHIQAGQCGNQIGAKFWEVISD+HGIDP+G Y GDSDLQL+RIS+YYNEA+  KY+
Sbjct: 1    MREIVHIQAGQCGNQIGAKFWEVISDDHGIDPSGNYVGDSDLQLERISMYYNEASSHKYL 60

Query: 354  PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 533
            PRAILV LEPGTMDSVRSG FG +FRPDNF+FGQSG GNNWAKGHY EGAEL DSVLDVV
Sbjct: 61   PRAILVYLEPGTMDSVRSGAFGHLFRPDNFIFGQSGTGNNWAKGHYREGAELEDSVLDVV 120

Query: 534  RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 713
            RK+ E+CDCLQGFQ                   K+REEYPDRIMNTFSVVPSPKVSDTVV
Sbjct: 121  RKQCENCDCLQGFQLTHSLGGGTLLIS------KVREEYPDRIMNTFSVVPSPKVSDTVV 174

Query: 714  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 893
            EPYNA+LS+HQLVEN DETYCI+NEALYDICFRT+KL TPTYGDLNHLVSATMSGVTT L
Sbjct: 175  EPYNASLSIHQLVENMDETYCINNEALYDICFRTVKLATPTYGDLNHLVSATMSGVTTSL 234

Query: 894  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMM 1073
            RFPGQLNADLRK AVNM PFPRLHFFMPGFAPLT RGSQQYRALTVPELTQ +FDAKNMM
Sbjct: 235  RFPGQLNADLRKQAVNMXPFPRLHFFMPGFAPLTDRGSQQYRALTVPELTQXMFDAKNMM 294

Query: 1074 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 1253
            AA DPRHGRYLTVA VFRGRMSMKEVDEQML +Q+KNSSY VEWIPNNV  AVCDIPPRG
Sbjct: 295  AAYDPRHGRYLTVATVFRGRMSMKEVDEQMLAIQSKNSSYLVEWIPNNVNVAVCDIPPRG 354

Query: 1254 LKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 1433
            +KM+ TFIGNSTA QELFK ISEQFTAMFR KAFLHWYTGEGMDE+EFTEAESNMNDLV 
Sbjct: 355  IKMSSTFIGNSTATQELFKCISEQFTAMFRCKAFLHWYTGEGMDEIEFTEAESNMNDLVF 414

Query: 1434 EYQQYQD 1454
            EYQQYQD
Sbjct: 415  EYQQYQD 421


>ref|NP_001074440.1| tubulin, beta 1 [Mus musculus].
          Length = 451

 Score =  689 bits (1777), Expect = 0.0
 Identities = 327/427 (76%), Positives = 373/427 (87%)
 Frame = +3

Query: 174  MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYV 353
            MREIVHIQ GQCGNQIGAKFWEVI +EHGID  G+Y G S LQL+RISVYYNEA G KYV
Sbjct: 1    MREIVHIQIGQCGNQIGAKFWEVIGEEHGIDCAGSYCGTSALQLERISVYYNEAYGKKYV 60

Query: 354  PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 533
            PRA+LVDLEPGTMDS+RS   G +F+PD+FV G SGAGNNWAKGHYTEGAEL+++V+DVV
Sbjct: 61   PRAVLVDLEPGTMDSIRSSRLGVLFQPDSFVHGNSGAGNNWAKGHYTEGAELIENVMDVV 120

Query: 534  RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 713
            R+E+ESCDCLQGFQ                   KIREEYPDRI+N+FSV+PSPKVSDTVV
Sbjct: 121  RRESESCDCLQGFQIVHSLGGGTGSGMGTLLMNKIREEYPDRILNSFSVMPSPKVSDTVV 180

Query: 714  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 893
            EPYNA LS+HQL+ENTD  +CIDNEALYDICFRTL+LTTPTYGDLNHLVS TMSG+TT L
Sbjct: 181  EPYNAVLSIHQLIENTDACFCIDNEALYDICFRTLRLTTPTYGDLNHLVSLTMSGITTSL 240

Query: 894  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMM 1073
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT++GSQQYRAL+V ELTQQ+FDA+N+M
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTAQGSQQYRALSVAELTQQMFDARNIM 300

Query: 1074 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 1253
            AACDPR GRYLTVA +FRG+MS KEVD+Q+L++Q +NS+ FVEWIPNNVK AVCDIPPRG
Sbjct: 301  AACDPRRGRYLTVACIFRGKMSTKEVDQQLLSIQTRNSNCFVEWIPNNVKVAVCDIPPRG 360

Query: 1254 LKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 1433
            L MA TF+GN+TAIQELF R+SE F+AMFRR+AF+HWYT EGMD  EF EAES+++DLVS
Sbjct: 361  LNMAATFLGNNTAIQELFTRVSEHFSAMFRRRAFVHWYTSEGMDISEFGEAESDIHDLVS 420

Query: 1434 EYQQYQD 1454
            EYQQ+QD
Sbjct: 421  EYQQFQD 427


  Database: RefSeq49_MP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 15,617,559
  Number of sequences in database:  30,036
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 85,152,505
Number of extensions: 2511958
Number of successful extensions: 8402
Number of sequences better than 1.0e-05: 28
Number of HSP's gapped: 8310
Number of HSP's successfully gapped: 28
Length of query: 816
Length of database: 15,617,559
Length adjustment: 110
Effective length of query: 706
Effective length of database: 12,313,599
Effective search space: 8693400894
Effective search space used: 8693400894
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-006973
         (2448 letters)

Database: RefSeq49_SP.fasta 
           24,897 sequences; 11,343,932 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001038077.1| tubulin beta chain [Sus scrofa].                  830   0.0  
Alignment   gi|XP_003122400.2| PREDICTED: tubulin beta-2C chain-like [Sus s...   823   0.0  
Alignment   gi|NP_001230363.1| tubulin beta-2B chain [Sus scrofa].               816   0.0  
Alignment   gi|NP_001107168.1| tubulin beta-1 chain [Sus scrofa].                683   0.0  
Alignment   gi|XP_003356561.1| PREDICTED: tubulin beta-2A chain-like [Sus s...   624   0.0  
Alignment   gi|XP_003355769.1| PREDICTED: tubulin beta-3 chain-like [Sus sc...   651   0.0  
Alignment   gi|XP_003123158.2| PREDICTED: far upstream element-binding prot...   630   e-180
Alignment   gi|XP_003356396.1| PREDICTED: tubulin beta-6 chain-like, partia...   610   e-174
Alignment   gi|XP_003355423.1| PREDICTED: tubulin alpha-1C chain isoform 1 ...   346   3e-95
Alignment   gi|NP_001038009.1| tubulin alpha-1B chain [Sus scrofa].              345   5e-95

>ref|NP_001038077.1| tubulin beta chain [Sus scrofa].
          Length = 444

 Score =  830 bits (2145), Expect = 0.0
 Identities = 408/427 (95%), Positives = 408/427 (95%)
 Frame = +3

Query: 174  MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYV 353
            MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYV
Sbjct: 1    MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYV 60

Query: 354  PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 533
            PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 61   PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120

Query: 534  RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 713
            RKEAESCDCLQGFQ                   KIREEYPDRIMNTFSVVPSPKVSDTVV
Sbjct: 121  RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV 180

Query: 714  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 893
            EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
Sbjct: 181  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240

Query: 894  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMM 1073
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMM
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMM 300

Query: 1074 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 1253
            AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
Sbjct: 301  AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 360

Query: 1254 LKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 1433
            LKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361  LKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 1434 EYQQYQD 1454
            EYQQYQD
Sbjct: 421  EYQQYQD 427


>ref|XP_003122400.2| PREDICTED: tubulin beta-2C chain-like [Sus scrofa].
          Length = 445

 Score =  823 bits (2125), Expect = 0.0
 Identities = 401/427 (93%), Positives = 407/427 (95%)
 Frame = +3

Query: 174  MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYV 353
            MREIVH+QAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL+RI+VYYNEATGGKYV
Sbjct: 1    MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60

Query: 354  PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 533
            PRA+LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 61   PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120

Query: 534  RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 713
            RKEAESCDCLQGFQ                   KIREEYPDRIMNTFSVVPSPKVSDTVV
Sbjct: 121  RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV 180

Query: 714  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 893
            EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
Sbjct: 181  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240

Query: 894  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMM 1073
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQ+FDAKNMM
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 300

Query: 1074 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 1253
            AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
Sbjct: 301  AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 360

Query: 1254 LKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 1433
            LKM+ TFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361  LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 1434 EYQQYQD 1454
            EYQQYQD
Sbjct: 421  EYQQYQD 427


>ref|NP_001230363.1| tubulin beta-2B chain [Sus scrofa].
          Length = 445

 Score =  816 bits (2108), Expect = 0.0
 Identities = 397/427 (92%), Positives = 406/427 (95%)
 Frame = +3

Query: 174  MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYV 353
            MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTG+YHGDSDLQL+RI+VYYNEATG KYV
Sbjct: 1    MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEATGNKYV 60

Query: 354  PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 533
            PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 61   PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120

Query: 534  RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 713
            RKE+ESCDCLQGFQ                   KIREEYPDRIMNTFSV+PSPKVSDTVV
Sbjct: 121  RKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVV 180

Query: 714  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 893
            EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
Sbjct: 181  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240

Query: 894  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMM 1073
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQ+FD+KNMM
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMM 300

Query: 1074 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 1253
            AACDPRHGRYLTVAA+FRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
Sbjct: 301  AACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 360

Query: 1254 LKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 1433
            LKM+ TFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361  LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 1434 EYQQYQD 1454
            EYQQYQD
Sbjct: 421  EYQQYQD 427


>ref|NP_001107168.1| tubulin beta-1 chain [Sus scrofa].
          Length = 449

 Score =  683 bits (1762), Expect = 0.0
 Identities = 328/427 (76%), Positives = 363/427 (85%)
 Frame = +3

Query: 174  MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYV 353
            MREIVHIQ GQCGNQIG+KFWEVI +EHGID  G+Y GD  +QL+RISVYYNEA G KYV
Sbjct: 1    MREIVHIQIGQCGNQIGSKFWEVIGEEHGIDGAGSYRGDCSVQLERISVYYNEAHGKKYV 60

Query: 354  PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 533
            PRA+LVDLEPGTMDS+RS   G +FRPD+FV G SGAGNNWAKGHYTEGAELV+ VLD V
Sbjct: 61   PRAVLVDLEPGTMDSIRSSRLGALFRPDSFVHGNSGAGNNWAKGHYTEGAELVEGVLDAV 120

Query: 534  RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 713
            R EAE CDCLQGFQ                   KIREE+PDRI+N+FSV+PS KVSDTVV
Sbjct: 121  RSEAEGCDCLQGFQVVHSLGGGTGSGMGTLLMGKIREEFPDRILNSFSVMPSAKVSDTVV 180

Query: 714  EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 893
            EPYNA LS+HQL++N D  +CIDNEALYDIC RTL+LTTPTYGDLNHLVS TMSGVTT L
Sbjct: 181  EPYNAVLSIHQLLQNADACFCIDNEALYDICCRTLRLTTPTYGDLNHLVSLTMSGVTTSL 240

Query: 894  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMM 1073
            RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT++GSQQYRALTV ELTQQ+FDA+N M
Sbjct: 241  RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTAQGSQQYRALTVAELTQQMFDARNTM 300

Query: 1074 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 1253
             ACDPR GRYLTVA +FRG+MS KEVDEQ+L VQ +NSS FVEWIPNN+K AVCDIPPRG
Sbjct: 301  TACDPRRGRYLTVACIFRGQMSTKEVDEQLLTVQTRNSSCFVEWIPNNLKVAVCDIPPRG 360

Query: 1254 LKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 1433
            L MA TFIGNSTAIQELF R+SE F+AMF+RKAF+HWYTGEGMD  EF EAES++ DLVS
Sbjct: 361  LSMAATFIGNSTAIQELFGRVSEHFSAMFKRKAFVHWYTGEGMDVSEFVEAESDIRDLVS 420

Query: 1434 EYQQYQD 1454
            EYQQ+QD
Sbjct: 421  EYQQFQD 427


>ref|XP_003356561.1| PREDICTED: tubulin beta-2A chain-like [Sus scrofa].
          Length = 416

 Score =  624 bits (1608), Expect(2) = 0.0
 Identities = 306/333 (91%), Positives = 312/333 (93%)
 Frame = +3

Query: 456  SGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXK 635
            SGAGNNWAKGHYTEGAELVDSVLDVVRKE+ESCDCLQGFQ                   K
Sbjct: 66   SGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQLTHSLGGGTGSGMGTLLISK 125

Query: 636  IREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRT 815
            IREEYPDRIMNTFSV+PSPKVSDTVVEPYNATLSVHQLVENTDETY IDNEALYDICFRT
Sbjct: 126  IREEYPDRIMNTFSVMPSPKVSDTVVEPYNATLSVHQLVENTDETYSIDNEALYDICFRT 185

Query: 816  LKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT 995
            LKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT
Sbjct: 186  LKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT 245

Query: 996  SRGSQQYRALTVPELTQQVFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQ 1175
            SRGSQQYRALTVPELTQQ+FD+KNMMAACDPRHGRYLTVAA+FRGRMSMKEVDEQMLNVQ
Sbjct: 246  SRGSQQYRALTVPELTQQMFDSKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQ 305

Query: 1176 NKNSSYFVEWIPNNVKTAVCDIPPRGLKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAF 1355
            NKNSSYFVEWIPNNVKTAVCDIPPRGLKM+ TFIGNSTAIQELFKRISEQFTAMFRRKAF
Sbjct: 306  NKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAF 365

Query: 1356 LHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQD 1454
            LHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQD
Sbjct: 366  LHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQD 398



 Score = 64.7 bits (156), Expect(2) = 0.0
 Identities = 35/63 (55%), Positives = 37/63 (58%)
 Frame = +1

Query: 256 MASTPPAPIMGTATCSWTASPCTTMKPQVANMFLVLSWWI*NPGLWTLFAQVLSVRSSDQ 435
           MASTP A  M TATCSW  S CTTMKP V +M    SWWI +   WT      S RSS  
Sbjct: 1   MASTPLAVTMATATCSWRGSTCTTMKPLVTSMCPGPSWWIWSRAPWTRSGLDPSARSSGP 60

Query: 436 TTL 444
           TTL
Sbjct: 61  TTL 63


>ref|XP_003355769.1| PREDICTED: tubulin beta-3 chain-like [Sus scrofa].
          Length = 378

 Score =  651 bits (1679), Expect = 0.0
 Identities = 317/355 (89%), Positives = 327/355 (92%)
 Frame = +3

Query: 390  MDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 569
            MDSVRSG FG +FRPDNF+FGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE E+CDCLQG
Sbjct: 1    MDSVRSGAFGHLFRPDNFIFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKECENCDCLQG 60

Query: 570  FQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQL 749
            FQ                   K+REEYPDRIMNTFSVVPSPKVSDTVVEPYNATLS+HQL
Sbjct: 61   FQLTHSLGGGTGSGMGTLLISKVREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSIHQL 120

Query: 750  VENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRK 929
            VENTDETYCIDNEALYDICFRTLKL TPTYGDLNHLVSATMSGVTT LRFPGQLNADLRK
Sbjct: 121  VENTDETYCIDNEALYDICFRTLKLATPTYGDLNHLVSATMSGVTTSLRFPGQLNADLRK 180

Query: 930  LAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMMAACDPRHGRYLT 1109
            LAVNMVPFPRLHFFMPGFAPLT+RGSQQYRALTVPELTQQ+FDAKNMMAACDPRHGRYLT
Sbjct: 181  LAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLT 240

Query: 1110 VAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAVTFIGNST 1289
            VA VFRGRMSMKEVDEQML +Q+KNSSYFVEWIPNNVK AVCDIPPRGLKM+ TFIGNST
Sbjct: 241  VATVFRGRMSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVCDIPPRGLKMSSTFIGNST 300

Query: 1290 AIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQD 1454
            AIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQD
Sbjct: 301  AIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQD 355


>ref|XP_003123158.2| PREDICTED: far upstream element-binding protein 2-like [Sus scrofa].
          Length = 930

 Score =  630 bits (1625), Expect = e-180
 Identities = 310/335 (92%), Positives = 315/335 (94%)
 Frame = +3

Query: 450  GQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXX 629
            GQSGAGNNWAKGHYTEGAELVD+VLDVVRKEAESCDCLQGFQ                  
Sbjct: 579  GQSGAGNNWAKGHYTEGAELVDAVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLI 638

Query: 630  XKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICF 809
             KIREE+PDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICF
Sbjct: 639  SKIREEFPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICF 698

Query: 810  RTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAP 989
            RTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAP
Sbjct: 699  RTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAP 758

Query: 990  LTSRGSQQYRALTVPELTQQVFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLN 1169
            LTSRGSQQYRALTVPELTQQ+FDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQML+
Sbjct: 759  LTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLS 818

Query: 1170 VQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAVTFIGNSTAIQELFKRISEQFTAMFRRK 1349
            VQ+KNSSYFVEWIPNNVKTAVCDIPPRGLKMA TFIGNSTAIQELFKRISEQFTAMFRRK
Sbjct: 819  VQSKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRK 878

Query: 1350 AFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQD 1454
            AFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQD
Sbjct: 879  AFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQD 913


>ref|XP_003356396.1| PREDICTED: tubulin beta-6 chain-like, partial [Sus scrofa].
          Length = 366

 Score =  610 bits (1572), Expect = e-174
 Identities = 299/338 (88%), Positives = 310/338 (91%)
 Frame = +3

Query: 441  FVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXX 620
            F+ GQ+GAGNNWAKGHYTEGAEL+DSVLDVVRKE+E CDCLQGFQ               
Sbjct: 10   FIPGQTGAGNNWAKGHYTEGAELMDSVLDVVRKESEHCDCLQGFQLTHSLGGGTGSGMGT 69

Query: 621  XXXXKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYD 800
                KIREE+PDRIMNTFSV+PSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYD
Sbjct: 70   LLISKIREEFPDRIMNTFSVMPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYD 129

Query: 801  ICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPG 980
            ICFRTLKLTTPTYGDLNHLVSATMSGVTT LRFPGQLNADLRKLAVNMVPFPRLHFFMPG
Sbjct: 130  ICFRTLKLTTPTYGDLNHLVSATMSGVTTSLRFPGQLNADLRKLAVNMVPFPRLHFFMPG 189

Query: 981  FAPLTSRGSQQYRALTVPELTQQVFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQ 1160
            FAPLT+RGSQQYRALTVPELTQQ+FDAKNMMAACDPRHGRYLTVA VFRG MSMKEVDEQ
Sbjct: 190  FAPLTARGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVATVFRGPMSMKEVDEQ 249

Query: 1161 MLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAVTFIGNSTAIQELFKRISEQFTAMF 1340
            ML +QNKNSSYFVEWIPNNVK AVCDIPP GLKMA TFIGNSTAIQELFKRISEQF+AMF
Sbjct: 250  MLAIQNKNSSYFVEWIPNNVKVAVCDIPPCGLKMAATFIGNSTAIQELFKRISEQFSAMF 309

Query: 1341 RRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQD 1454
            RRKAFLHW+TGEGMDEMEFTEAESNMNDLVSEYQQYQD
Sbjct: 310  RRKAFLHWFTGEGMDEMEFTEAESNMNDLVSEYQQYQD 347


>ref|XP_003355423.1| PREDICTED: tubulin alpha-1C chain isoform 1 [Sus scrofa].
          Length = 449

 Score =  346 bits (888), Expect = 3e-95
 Identities = 171/434 (39%), Positives = 252/434 (58%), Gaps = 10/434 (2%)
 Frame = +3

Query: 174  MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--DRISVYYNEATGGK 347
            MRE + I  GQ G QIG   WE+   EHGI P G    D  +    D  + +++E   GK
Sbjct: 1    MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60

Query: 348  YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 527
            +VPRA+ VDLEP  +D VR+G + Q+F P+  + G+  A NN+A+GHYT G E++D VLD
Sbjct: 61   HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 120

Query: 528  VVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDT 707
             +RK A+ C  LQGF                    ++  +Y  +    FS+ P+P+VS  
Sbjct: 121  RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 180

Query: 708  VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT 887
            VVEPYN+ L+ H  +E++D  + +DNEA+YDIC R L +  PTY +LN L+S  +S +T 
Sbjct: 181  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLMSQIVSSITA 240

Query: 888  CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKN 1067
             LRF G LN DL +   N+VP+PR+HF +  +AP+ S     +  LTV E+T   F+  N
Sbjct: 241  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPAN 300

Query: 1068 MMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPP 1247
             M  CDPRHG+Y+    ++RG +  K+V+  +  ++ K S  FV+W P   K  +   PP
Sbjct: 301  QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPP 360

Query: 1248 --------RGLKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTE 1403
                      ++ AV  + N+TAI E + R+  +F  M+ ++AF+HWY GEGM+E EF+E
Sbjct: 361  TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420

Query: 1404 AESNMNDLVSEYQQ 1445
            A  +M  L  +Y++
Sbjct: 421  AREDMAALEKDYEE 434


>ref|NP_001038009.1| tubulin alpha-1B chain [Sus scrofa].
          Length = 451

 Score =  345 bits (886), Expect = 5e-95
 Identities = 170/434 (39%), Positives = 252/434 (58%), Gaps = 10/434 (2%)
 Frame = +3

Query: 174  MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--DRISVYYNEATGGK 347
            MRE + I  GQ G QIG   WE+   EHGI P G    D  +    D  + +++E   GK
Sbjct: 1    MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60

Query: 348  YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 527
            +VPRA+ VDLEP  +D VR+G + Q+F P+  + G+  A NN+A+GHYT G E++D VLD
Sbjct: 61   HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 120

Query: 528  VVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDT 707
             +RK A+ C  LQGF                    ++  +Y  +    FS+ P+P+VS  
Sbjct: 121  RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 180

Query: 708  VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT 887
            VVEPYN+ L+ H  +E++D  + +DNEA+YDIC R L +  PTY +LN L+S  +S +T 
Sbjct: 181  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA 240

Query: 888  CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKN 1067
             LRF G LN DL +   N+VP+PR+HF +  +AP+ S     +  L+V E+T   F+  N
Sbjct: 241  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 300

Query: 1068 MMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPP 1247
             M  CDPRHG+Y+    ++RG +  K+V+  +  ++ K S  FV+W P   K  +   PP
Sbjct: 301  QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPP 360

Query: 1248 --------RGLKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTE 1403
                      ++ AV  + N+TAI E + R+  +F  M+ ++AF+HWY GEGM+E EF+E
Sbjct: 361  TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420

Query: 1404 AESNMNDLVSEYQQ 1445
            A  +M  L  +Y++
Sbjct: 421  AREDMAALEKDYEE 434


  Database: RefSeq49_SP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 11,343,932
  Number of sequences in database:  24,897
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 64,462,821
Number of extensions: 2031197
Number of successful extensions: 6531
Number of sequences better than 1.0e-05: 29
Number of HSP's gapped: 6452
Number of HSP's successfully gapped: 31
Length of query: 816
Length of database: 11,343,932
Length adjustment: 107
Effective length of query: 709
Effective length of database: 8,679,953
Effective search space: 6154086677
Effective search space used: 6154086677
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-006973
         (2448 letters)

Database: Sscrofa_10.2.fasta 
           4582 sequences; 2,808,509,378 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Sscrofa_Chr07                                                        2302   0.0  
Sscrofa_Chr01                                                        1063   0.0  
Sscrofa_Chr02                                                         989   0.0  
Sscrofa_Chr06                                                         950   0.0  
Sscrofa_Chr17                                                         343   3e-91
gb|GL895527.2| Sus scrofa unplaced genomic scaffold ChrUScaf3411      230   3e-57

>Sscrofa_Chr07 
||          Length = 134764511

 Score = 2302 bits (1161), Expect = 0.0
 Identities = 1161/1161 (100%)
 Strand = Plus / Plus

                                                                            
Query: 450      ggtcagtctggggcaggcaacaactgggccaagggccactatacagaaggggctgagctg 509
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26972198 ggtcagtctggggcaggcaacaactgggccaagggccactatacagaaggggctgagctg 26972257

                                                                            
Query: 510      gttgactcagtcctggatgtggttcggaaggaggctgagagctgtgactgccttcagggc 569
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26972258 gttgactcagtcctggatgtggttcggaaggaggctgagagctgtgactgccttcagggc 26972317

                                                                            
Query: 570      ttccagctgacccactcgctgggcggtggcacaggctctggaatgggcactttgctcatc 629
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26972318 ttccagctgacccactcgctgggcggtggcacaggctctggaatgggcactttgctcatc 26972377

                                                                            
Query: 630      agcaagatccgtgaagaatatcccgaccgcatcatgaataccttcagtgtcgtgccctca 689
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26972378 agcaagatccgtgaagaatatcccgaccgcatcatgaataccttcagtgtcgtgccctca 26972437

                                                                            
Query: 690      cccaaagtgtctgacaccgtggttgagccctacaacgccaccctctctgtccatcagttg 749
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26972438 cccaaagtgtctgacaccgtggttgagccctacaacgccaccctctctgtccatcagttg 26972497

                                                                            
Query: 750      gtggagaacactgatgagacctactgcatcgacaatgaggccctttacgacatctgcttc 809
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26972498 gtggagaacactgatgagacctactgcatcgacaatgaggccctttacgacatctgcttc 26972557

                                                                            
Query: 810      cgcactctcaagctgaccacgccaacctatggggacctgaaccaccttgtctctgccacc 869
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26972558 cgcactctcaagctgaccacgccaacctatggggacctgaaccaccttgtctctgccacc 26972617

                                                                            
Query: 870      atgagtggtgtcaccacctgcctccgcttccctggccagctcaatgctgacctccgcaag 929
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26972618 atgagtggtgtcaccacctgcctccgcttccctggccagctcaatgctgacctccgcaag 26972677

                                                                            
Query: 930      ctggcagtcaatatggtgcccttcccacgtctccacttcttcatgcccggctttgcccct 989
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26972678 ctggcagtcaatatggtgcccttcccacgtctccacttcttcatgcccggctttgcccct 26972737

                                                                            
Query: 990      ctgaccagccgtggaagccagcagtaccgggccctcactgtgcctgagctcacccagcag 1049
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26972738 ctgaccagccgtggaagccagcagtaccgggccctcactgtgcctgagctcacccagcag 26972797

                                                                            
Query: 1050     gtcttcgatgccaagaacatgatggctgcctgtgacccccgccatggccggtacctcact 1109
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26972798 gtcttcgatgccaagaacatgatggctgcctgtgacccccgccatggccggtacctcact 26972857

                                                                            
Query: 1110     gtggctgctgtcttccgtgggcgcatgtccatgaaggaggtggatgagcagatgctcaac 1169
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26972858 gtggctgctgtcttccgtgggcgcatgtccatgaaggaggtggatgagcagatgctcaac 26972917

                                                                            
Query: 1170     gtgcagaacaagaatagcagctacttcgtagaatggatccccaacaatgtcaagacggct 1229
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26972918 gtgcagaacaagaatagcagctacttcgtagaatggatccccaacaatgtcaagacggct 26972977

                                                                            
Query: 1230     gtctgcgatatccctccccgtggcctcaagatggcggtcaccttcatcggcaacagcacg 1289
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26972978 gtctgcgatatccctccccgtggcctcaagatggcggtcaccttcatcggcaacagcacg 26973037

                                                                            
Query: 1290     gccatccaggagctattcaagcgcatctcagagcagttcactgccatgttccgccgaaag 1349
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26973038 gccatccaggagctattcaagcgcatctcagagcagttcactgccatgttccgccgaaag 26973097

                                                                            
Query: 1350     gccttcctccactggtacacaggtgagggcatggacgagatggagttcactgaggctgag 1409
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26973098 gccttcctccactggtacacaggtgagggcatggacgagatggagttcactgaggctgag 26973157

                                                                            
Query: 1410     agcaacatgaatgacctcgtctctgagtaccagcagtaccaggatgccaccgcagaagag 1469
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26973158 agcaacatgaatgacctcgtctctgagtaccagcagtaccaggatgccaccgcagaagag 26973217

                                                                            
Query: 1470     gaggaggatttcggtgaggaggccgaagaggaggcctaaggccgagccccatcacctcag 1529
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26973218 gaggaggatttcggtgaggaggccgaagaggaggcctaaggccgagccccatcacctcag 26973277

                                                                            
Query: 1530     gcttctcagccccctcagccttcttcaactgcccctttcctctccctcagaatttgcgtt 1589
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26973278 gcttctcagccccctcagccttcttcaactgcccctttcctctccctcagaatttgcgtt 26973337

                                     
Query: 1590     ttctgcctcttgtttttcttt 1610
                |||||||||||||||||||||
Sbjct: 26973338 ttctgcctcttgtttttcttt 26973358



 Score = 1029 bits (519), Expect = 0.0
 Identities = 876/995 (88%)
 Strand = Plus / Minus

                                                                           
Query: 465     ggcaacaactgggccaagggccactatacagaaggggctgagctggttgactcagtcctg 524
               |||||||||||||||||||||||||| || || || || |||||||| ||||| ||||||
Sbjct: 1976314 ggcaacaactgggccaagggccactacacggagggcgccgagctggtggactcggtcctg 1976255

                                                                           
Query: 525     gatgtggttcggaaggaggctgagagctgtgactgccttcagggcttccagctgacccac 584
               || |||||  |||||||| | |||||||||||||| || |||||||||||||||||||||
Sbjct: 1976254 gacgtggtcaggaaggagtcagagagctgtgactgtctgcagggcttccagctgacccac 1976195

                                                                           
Query: 585     tcgctgggcggtggcacaggctctggaatgggcactttgctcatcagcaagatccgtgaa 644
               |||||||| || ||||| ||||| || ||||||||  ||||||| ||||||||||| || 
Sbjct: 1976194 tcgctggggggcggcacgggctccgggatgggcaccctgctcattagcaagatccgcgag 1976135

                                                                           
Query: 645     gaatatcccgaccgcatcatgaataccttcagtgtcgtgccctcacccaaagtgtctgac 704
               || || ||||||||||||||||| |||||||| ||| ||||||||||||| || || |||
Sbjct: 1976134 gagtaccccgaccgcatcatgaacaccttcagcgtcatgccctcacccaaggtctcggac 1976075

                                                                           
Query: 705     accgtggttgagccctacaacgccaccctctctgtccatcagttggtggagaacactgat 764
               || ||||| ||||||||||||||||||||||| || || ||| ||||||||||||| |||
Sbjct: 1976074 acggtggtcgagccctacaacgccaccctctccgtgcaccagctggtggagaacacggat 1976015

                                                                           
Query: 765     gagacctactgcatcgacaatgaggccctttacgacatctgcttccgcactctcaagctg 824
               |||||||||| ||||||||| |||||||| |||||||||||||||||||| || ||||||
Sbjct: 1976014 gagacctactccatcgacaacgaggccctgtacgacatctgcttccgcaccctgaagctg 1975955

                                                                           
Query: 825     accacgccaacctatggggacctgaaccaccttgtctctgccaccatgagtggtgtcacc 884
               |||||||| ||||| |||||||| |||||||| || || ||||||||||| || ||||||
Sbjct: 1975954 accacgcccacctacggggacctcaaccacctggtgtcggccaccatgagcggggtcacc 1975895

                                                                           
Query: 885     acctgcctccgcttccctggccagctcaatgctgacctccgcaagctggcagtcaatatg 944
               || ||||| |||||||| ||||||||||| || ||||| ||||||||||| || || |||
Sbjct: 1975894 acgtgcctgcgcttcccgggccagctcaacgccgacctgcgcaagctggccgtgaacatg 1975835

                                                                           
Query: 945     gtgcccttcccacgtctccacttcttcatgcccggctttgcccctctgaccagccgtgga 1004
               ||||||||||| || || |||||||||||||||||||| || || ||||||||||| || 
Sbjct: 1975834 gtgcccttcccgcgcctgcacttcttcatgcccggcttcgcgccgctgaccagccgcggc 1975775

                                                                           
Query: 1005    agccagcagtaccgggccctcactgtgcctgagctcacccagcaggtcttcgatgccaag 1064
               |||||||||||||| || || || ||||| |||||||| |||||| | |||||  |||||
Sbjct: 1975774 agccagcagtaccgcgcgctgacggtgcccgagctcacgcagcagatgttcgactccaag 1975715

                                                                           
Query: 1065    aacatgatggctgcctgtgacccccgccatggccggtacctcactgtggctgctgtcttc 1124
               ||||||||||| ||||| ||||| ||||| ||||| ||||| || ||||| ||  |||||
Sbjct: 1975714 aacatgatggccgcctgcgacccgcgccacggccgctacctgacggtggccgccatcttc 1975655

                                                                           
Query: 1125    cgtgggcgcatgtccatgaaggaggtggatgagcagatgctcaacgtgcagaacaagaat 1184
               || || ||||||||||||||||||||||| ||||||||||||||||||||||||||||| 
Sbjct: 1975654 cgcggccgcatgtccatgaaggaggtggacgagcagatgctcaacgtgcagaacaagaac 1975595

                                                                           
Query: 1185    agcagctacttcgtagaatggatccccaacaatgtcaagacggctgtctgcgatatccct 1244
               |||||||||||||| || |||||||||||||| ||||||||||| || ||||| ||||| 
Sbjct: 1975594 agcagctacttcgtggagtggatccccaacaacgtcaagacggccgtgtgcgacatcccg 1975535

                                                                           
Query: 1245    ccccgtggcctcaagatggcggtcaccttcatcggcaacagcacggccatccaggagcta 1304
               || || |||||||||||| ||| |||||||||||||||||||||||||||||||||||| 
Sbjct: 1975534 ccgcgcggcctcaagatgtcggccaccttcatcggcaacagcacggccatccaggagctg 1975475

                                                                           
Query: 1305    ttcaagcgcatctcagagcagttcactgccatgttccgccgaaaggccttcctccactgg 1364
               |||||||||||||| ||||||||||| ||||||||||| || ||||||||||| ||||||
Sbjct: 1975474 ttcaagcgcatctcggagcagttcacggccatgttccggcgcaaggccttcctgcactgg 1975415

                                                                           
Query: 1365    tacacaggtgagggcatggacgagatggagttcactgaggctgagagcaacatgaatgac 1424
               ||||| || |||||||||||||||||||||||||| ||||| |||||||||||||| |||
Sbjct: 1975414 tacacgggcgagggcatggacgagatggagttcaccgaggccgagagcaacatgaacgac 1975355

                                                  
Query: 1425    ctcgtctctgagtaccagcagtaccaggatgccac 1459
               || || || |||||||||||||||||||| |||||
Sbjct: 1975354 ctggtgtccgagtaccagcagtaccaggacgccac 1975320



 Score = 1029 bits (519), Expect = 0.0
 Identities = 876/995 (88%)
 Strand = Plus / Minus

                                                                           
Query: 465     ggcaacaactgggccaagggccactatacagaaggggctgagctggttgactcagtcctg 524
               |||||||||||||||||||||||||| ||||| || || |||||||| ||||| ||||||
Sbjct: 2014796 ggcaacaactgggccaagggccactacacagagggcgccgagctggtggactcggtcctg 2014737

                                                                           
Query: 525     gatgtggttcggaaggaggctgagagctgtgactgccttcagggcttccagctgacccac 584
               || |||||  |||||||| | |||||||||||||| || |||||||||||||||||||||
Sbjct: 2014736 gacgtggtcaggaaggagtcagagagctgtgactgtctgcagggcttccagctgacccac 2014677

                                                                           
Query: 585     tcgctgggcggtggcacaggctctggaatgggcactttgctcatcagcaagatccgtgaa 644
               |||||||| || ||||| || || || ||||||||  ||||||||||||||||||| || 
Sbjct: 2014676 tcgctggggggcggcacgggttcggggatgggcaccctgctcatcagcaagatccgcgag 2014617

                                                                           
Query: 645     gaatatcccgaccgcatcatgaataccttcagtgtcgtgccctcacccaaagtgtctgac 704
               || || ||||||||||||||||| |||||||| ||| ||||||| ||||| || || |||
Sbjct: 2014616 gagtaccccgaccgcatcatgaacaccttcagcgtcatgccctcgcccaaggtctcggac 2014557

                                                                           
Query: 705     accgtggttgagccctacaacgccaccctctctgtccatcagttggtggagaacactgat 764
               || ||||| ||||||||||||||||||||||| || || ||| ||||||||||||| |||
Sbjct: 2014556 acggtggtcgagccctacaacgccaccctctccgtgcaccagctggtggagaacacggat 2014497

                                                                           
Query: 765     gagacctactgcatcgacaatgaggccctttacgacatctgcttccgcactctcaagctg 824
               |||||||| ||||||||||| |||||||| |||||||||||||||||||| || ||||||
Sbjct: 2014496 gagacctattgcatcgacaacgaggccctgtacgacatctgcttccgcaccctgaagctg 2014437

                                                                           
Query: 825     accacgccaacctatggggacctgaaccaccttgtctctgccaccatgagtggtgtcacc 884
               |||||||| ||||| |||||||| |||||||| || || ||||||||||| || ||||||
Sbjct: 2014436 accacgcccacctacggggacctcaaccacctggtgtcggccaccatgagcggggtcacc 2014377

                                                                           
Query: 885     acctgcctccgcttccctggccagctcaatgctgacctccgcaagctggcagtcaatatg 944
               || ||||| |||||||| ||||||||||| || ||||| ||||||||||| || || |||
Sbjct: 2014376 acgtgcctgcgcttcccgggccagctcaacgccgacctgcgcaagctggccgtgaacatg 2014317

                                                                           
Query: 945     gtgcccttcccacgtctccacttcttcatgcccggctttgcccctctgaccagccgtgga 1004
               ||||||||||| || || |||||||||||||||||||| || || ||||||||||| || 
Sbjct: 2014316 gtgcccttcccgcgcctgcacttcttcatgcccggcttcgcgccgctgaccagccgcggc 2014257

                                                                           
Query: 1005    agccagcagtaccgggccctcactgtgcctgagctcacccagcaggtcttcgatgccaag 1064
               |||||||||||||| || || || ||||| |||||||| |||||| | |||||  |||||
Sbjct: 2014256 agccagcagtaccgcgcgctgacggtgcccgagctcacgcagcagatgttcgactccaag 2014197

                                                                           
Query: 1065    aacatgatggctgcctgtgacccccgccatggccggtacctcactgtggctgctgtcttc 1124
               ||||||||||| ||||| ||||| ||||| ||||| ||||| || ||||| ||  |||||
Sbjct: 2014196 aacatgatggccgcctgcgacccgcgccacggccgctacctgacggtggccgccatcttc 2014137

                                                                           
Query: 1125    cgtgggcgcatgtccatgaaggaggtggatgagcagatgctcaacgtgcagaacaagaat 1184
               || || ||||||||||||||||||||||| ||||||||||||||||||||||||||||| 
Sbjct: 2014136 cgcggccgcatgtccatgaaggaggtggacgagcagatgctcaacgtgcagaacaagaac 2014077

                                                                           
Query: 1185    agcagctacttcgtagaatggatccccaacaatgtcaagacggctgtctgcgatatccct 1244
               |||||||||||||| || |||||||||||||| ||||||||||| || ||||| ||||| 
Sbjct: 2014076 agcagctacttcgtggagtggatccccaacaacgtcaagacggccgtgtgcgacatcccg 2014017

                                                                           
Query: 1245    ccccgtggcctcaagatggcggtcaccttcatcggcaacagcacggccatccaggagcta 1304
               || || |||||||||||| ||| |||||||||||||||||||||||||||||||||||| 
Sbjct: 2014016 ccgcgcggcctcaagatgtcggccaccttcatcggcaacagcacggccatccaggagctg 2013957

                                                                           
Query: 1305    ttcaagcgcatctcagagcagttcactgccatgttccgccgaaaggccttcctccactgg 1364
               |||||||||||||| ||||||||||| ||||||||||| || ||||||||||| ||||||
Sbjct: 2013956 ttcaagcgcatctcggagcagttcacggccatgttccggcgcaaggccttcctgcactgg 2013897

                                                                           
Query: 1365    tacacaggtgagggcatggacgagatggagttcactgaggctgagagcaacatgaatgac 1424
               ||||| || |||||||||||||||||||||||||| ||||| |||||||||||||| |||
Sbjct: 2013896 tacacgggcgagggcatggacgagatggagttcaccgaggccgagagcaacatgaacgac 2013837

                                                  
Query: 1425    ctcgtctctgagtaccagcagtaccaggatgccac 1459
               || || || |||||||||||||||||||| |||||
Sbjct: 2013836 ctggtgtccgagtaccagcagtaccaggacgccac 2013802



 Score =  720 bits (363), Expect = 0.0
 Identities = 412/428 (96%), Gaps = 2/428 (0%)
 Strand = Plus / Plus

                                                                            
Query: 1672     tttgttgaatgtctcctctctctttccactctggggaacctagatttctgccattctggg 1731
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26973421 tttgttgaatgtctcctctctctttccactctggggaacctagatttctgccattctggg 26973480

                                                                            
Query: 1732     taaccctgtgtttccttctggtgcccacttcctcccatctgcccagtaaacatttccctg 1791
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26973481 taaccctgtgtttccttctggtgcccacttcctcccatctgcccagtaaacatttccctg 26973540

                                                                            
Query: 1792     tttttgagataatgcttcaagaagctgggttccaaccaaatcccatttagaacctgatag 1851
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26973541 tttttgagataatgcttcaagaagctgggttccaaccaaatcccatttagaacctgatag 26973600

                                                                            
Query: 1852     atgaccaccatcctaggcctgagaagtagcctgggggaaaggagatgcaggaacctcccc 1911
                ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 26973601 atgaccaccatcctaggcctgagaagtagcccgggggaaaggagatgcaggaacctcccc 26973660

                                                                            
Query: 1912     tgtccctgcaaggaaagggtggggctttggagaggggcctccaggctgttgaagtcctaa 1971
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26973661 tgtccctgcaaggaaagggtggggctttggagaggggcctccaggctgttgaagtcctaa 26973720

                                                                            
Query: 1972     tttccatttatctccctactcctctcagcttctnnnnnnntgttaacagtattatctcca 2031
                |||||||||||||||||||||||||||||||||       ||||||||||||||||||||
Sbjct: 26973721 tttccatttatctccctactcctctcagcttctgggggggtgttaacagtattatctcca 26973780

                                                                            
Query: 2032     ttttcagtctcccttccagctctgtcctgaattgtttgccttggaaagaagcctggcccc 2091
                |||||||||||||| | ||||||||||||| ||||||| |||||  || || ||||||||
Sbjct: 26973781 ttttcagtctccctccaagctctgtcctgagttgtttg-cttgg-taggagtctggcccc 26973838

                        
Query: 2092     gaccctgt 2099
                ||||||||
Sbjct: 26973839 gaccctgt 26973846



 Score =  426 bits (215), Expect = e-116
 Identities = 218/219 (99%)
 Strand = Plus / Plus

                                                                            
Query: 12       gaaccttcctgccgccgtgttcggacctcgctgctccagcctccggggcccgtcccatcc 71
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26969831 gaaccttcctgccgccgtgttcggacctcgctgctccagcctccggggcccgtcccatcc 26969890

                                                                            
Query: 72       ttccagcctgcgaccgggagcagagaaaaccaaaattacttatcattttcttgccccgta 131
                ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 26969891 ttccagcctgcgaccgggagcagagaaaaacaaaattacttatcattttcttgccccgta 26969950

                                                                            
Query: 132      cacaccttgaggcgagcaaaaagattagaataaattttaacaatgagggaaatcgtgcat 191
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26969951 cacaccttgaggcgagcaaaaagattagaataaattttaacaatgagggaaatcgtgcat 26970010

                                                       
Query: 192      atccaggccggtcagtgtggcaaccagatcggtgccaag 230
                |||||||||||||||||||||||||||||||||||||||
Sbjct: 26970011 atccaggccggtcagtgtggcaaccagatcggtgccaag 26970049



 Score =  226 bits (114), Expect = 5e-56
 Identities = 114/114 (100%)
 Strand = Plus / Plus

                                                                            
Query: 229      agttctgggaggtgatcagtgatgaacatggcatcgaccccaccggcacctatcatgggg 288
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26971435 agttctgggaggtgatcagtgatgaacatggcatcgaccccaccggcacctatcatgggg 26971494

                                                                      
Query: 289      acagcgacctgcagctggaccgcatctccgtgtactacaatgaagccacaggtg 342
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26971495 acagcgacctgcagctggaccgcatctccgtgtactacaatgaagccacaggtg 26971548



 Score =  220 bits (111), Expect = 3e-54
 Identities = 114/115 (99%)
 Strand = Plus / Plus

                                                                            
Query: 338      aggtggcaaatatgttcctcgtgctatcttggtggatctagaacccgggactatggactc 397
                ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 26971811 aggtggcaaatatgttcctcgtgctatcttggtggatctagaacctgggactatggactc 26971870

                                                                       
Query: 398      tgttcgctcaggtcctttcggtcagatcttcagaccagacaactttgtttttggt 452
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26971871 tgttcgctcaggtcctttcggtcagatcttcagaccagacaactttgtttttggt 26971925



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 91/107 (85%)
 Strand = Plus / Minus

                                                                           
Query: 229     agttctgggaggtgatcagtgatgaacatggcatcgaccccaccggcacctatcatgggg 288
               |||| |||||||| ||||| || || ||||||||||||||||| ||||  || ||||| |
Sbjct: 1987537 agttttgggaggtcatcagcgacgagcatggcatcgaccccactggcagttaccatggcg 1987478

                                                              
Query: 289     acagcgacctgcagctggaccgcatctccgtgtactacaatgaagcc 335
               |||||||| ||||||||||  | |||  |||||||||||||||||||
Sbjct: 1987477 acagcgacttgcagctggagaggatcaacgtgtactacaatgaagcc 1987431



 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 96/114 (84%)
 Strand = Plus / Minus

                                                                           
Query: 229     agttctgggaggtgatcagtgatgaacatggcatcgaccccaccggcacctatcatgggg 288
               |||| |||||||| ||||| || || ||||||||||||||||| ||||  || ||||| |
Sbjct: 2015626 agttttgggaggtcatcagcgacgagcatggcatcgaccccactggcagttaccatggcg 2015567

                                                                     
Query: 289     acagcgacctgcagctggaccgcatctccgtgtactacaatgaagccacaggtg 342
               |||| ||| ||||||||||  | |||  ||||||||||||||||||||| ||||
Sbjct: 2015566 acagtgacttgcagctggagaggatcaacgtgtactacaatgaagccactggtg 2015513


>Sscrofa_Chr01 
||          Length = 315321322

 Score = 1063 bits (536), Expect = 0.0
 Identities = 911/1036 (87%)
 Strand = Plus / Minus

                                                                             
Query: 468       aacaactgggccaagggccactatacagaaggggctgagctggttgactcagtcctggat 527
                 ||||||||||||||||| ||||| |||||||| || ||||| || ||||| || ||||||
Sbjct: 314136537 aacaactgggccaaggggcactacacagaaggcgcagagcttgtcgactcggtgctggat 314136478

                                                                             
Query: 528       gtggttcggaaggaggctgagagctgtgactgccttcagggcttccagctgacccactcg 587
                 || ||  |||||||||| ||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 314136477 gtcgtgaggaaggaggcggagagctgtgactgcctgcagggcttccagctgacccactcg 314136418

                                                                             
Query: 588       ctgggcggtggcacaggctctggaatgggcactttgctcatcagcaagatccgtgaagaa 647
                 ||||| || || || || ||||| ||||||||  ||||||||||||||||||| || || 
Sbjct: 314136417 ctgggtggggggaccgggtctgggatgggcaccctgctcatcagcaagatccgggaggag 314136358

                                                                             
Query: 648       tatcccgaccgcatcatgaataccttcagtgtcgtgccctcacccaaagtgtctgacacc 707
                 || ||||||||||||||||| |||||||| || |||||||| ||||| ||||| ||||| 
Sbjct: 314136357 taccccgaccgcatcatgaacaccttcagcgtggtgccctcgcccaaggtgtcggacacg 314136298

                                                                             
Query: 708       gtggttgagccctacaacgccaccctctctgtccatcagttggtggagaacactgatgag 767
                 ||||| ||||||||||||||||||||||| || || ||| ||||||||||||| ||||||
Sbjct: 314136297 gtggtggagccctacaacgccaccctctccgtgcaccagctggtggagaacacggatgag 314136238

                                                                             
Query: 768       acctactgcatcgacaatgaggccctttacgacatctgcttccgcactctcaagctgacc 827
                 ||||||||||||||||| |||||||| |||||||||||||||||||| || |||||||||
Sbjct: 314136237 acctactgcatcgacaacgaggccctgtacgacatctgcttccgcaccctgaagctgacc 314136178

                                                                             
Query: 828       acgccaacctatggggacctgaaccaccttgtctctgccaccatgagtggtgtcaccacc 887
                 ||||| ||||| |||||||| |||||||| || || ||||||||||| || |||||||||
Sbjct: 314136177 acgcccacctacggggacctcaaccacctggtgtcggccaccatgagcggggtcaccacc 314136118

                                                                             
Query: 888       tgcctccgcttccctggccagctcaatgctgacctccgcaagctggcagtcaatatggtg 947
                 ||||| |||||||| ||||||||||| || || || ||||||||||| || || ||||||
Sbjct: 314136117 tgcctgcgcttccccggccagctcaacgccgatctgcgcaagctggctgtgaacatggtg 314136058

                                                                             
Query: 948       cccttcccacgtctccacttcttcatgcccggctttgcccctctgaccagccgtggaagc 1007
                 |||||||| || || |||||||||||||| ||||| || || ||||||||||| || |||
Sbjct: 314136057 cccttcccgcgcctgcacttcttcatgcctggcttcgcgccgctgaccagccgcggcagc 314135998

                                                                             
Query: 1008      cagcagtaccgggccctcactgtgcctgagctcacccagcaggtcttcgatgccaagaac 1067
                 ||||||||||| || || || ||||| |||||||| |||||| | ||||| |||||||||
Sbjct: 314135997 cagcagtaccgcgcgctgacggtgcccgagctcacgcagcagatgttcgacgccaagaac 314135938

                                                                             
Query: 1068      atgatggctgcctgtgacccccgccatggccggtacctcactgtggctgctgtcttccgt 1127
                 |||||||| ||||| ||||| ||||| ||||| ||||| || ||||||||||| ||| | 
Sbjct: 314135937 atgatggccgcctgcgacccgcgccacggccgctacctgacggtggctgctgtgttcagg 314135878

                                                                             
Query: 1128      gggcgcatgtccatgaaggaggtggatgagcagatgctcaacgtgcagaacaagaatagc 1187
                 || ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||
Sbjct: 314135877 ggccgcatgtccatgaaggaggtggacgagcagatgctcaacgtgcagaacaagaacagc 314135818

                                                                             
Query: 1188      agctacttcgtagaatggatccccaacaatgtcaagacggctgtctgcgatatccctccc 1247
                 ||||||||||| || |||||||||||||| ||||||||||| || ||||| ||||| || 
Sbjct: 314135817 agctacttcgtggagtggatccccaacaacgtcaagacggccgtgtgcgacatcccgccg 314135758

                                                                             
Query: 1248      cgtggcctcaagatggcggtcaccttcatcggcaacagcacggccatccaggagctattc 1307
                 || |||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||
Sbjct: 314135757 cgcggcctcaagatgtcggccaccttcatcggcaacagcacggccatccaggagctgttc 314135698

                                                                             
Query: 1308      aagcgcatctcagagcagttcactgccatgttccgccgaaaggccttcctccactggtac 1367
                 ||||||||||| ||||||||||| ||||||||||| || ||||||||||| |||||||||
Sbjct: 314135697 aagcgcatctcggagcagttcacggccatgttccggcgcaaggccttcctgcactggtac 314135638

                                                                             
Query: 1368      acaggtgagggcatggacgagatggagttcactgaggctgagagcaacatgaatgacctc 1427
                 || || |||||||||||||||||||||||||| ||||| |||||||||||||| ||||| 
Sbjct: 314135637 acgggcgagggcatggacgagatggagttcaccgaggccgagagcaacatgaacgacctg 314135578

                                                                             
Query: 1428      gtctctgagtaccagcagtaccaggatgccaccgcagaagaggaggaggatttcggtgag 1487
                 || || |||||||||||||||||||| ||||| || || |||||||  || ||||  |||
Sbjct: 314135577 gtgtccgagtaccagcagtaccaggacgccacggccgaggaggagggcgagttcgaggag 314135518

                                 
Query: 1488      gaggccgaagaggagg 1503
                 |||||||| |||||||
Sbjct: 314135517 gaggccgaggaggagg 314135502



 Score =  107 bits (54), Expect = 3e-20
 Identities = 99/114 (86%)
 Strand = Plus / Minus

                                                                             
Query: 229       agttctgggaggtgatcagtgatgaacatggcatcgaccccaccggcacctatcatgggg 288
                 |||| |||||||||||||| || || ||||||||||| || ||||||||||| || ||||
Sbjct: 314137338 agttttgggaggtgatcagcgacgagcatggcatcgatcctaccggcacctaccacgggg 314137279

                                                                       
Query: 289       acagcgacctgcagctggaccgcatctccgtgtactacaatgaagccacaggtg 342
                 ||||||||||||||||||| || |||  |||||||||||| || ||||| ||||
Sbjct: 314137278 acagcgacctgcagctggagcggatcaacgtgtactacaacgaggccaccggtg 314137225


>Sscrofa_Chr02 
||          Length = 162569375

 Score =  989 bits (499), Expect = 0.0
 Identities = 871/995 (87%)
 Strand = Plus / Minus

                                                                            
Query: 465      ggcaacaactgggccaagggccactatacagaaggggctgagctggttgactcagtcctg 524
                |||||||||||||||||||||||||| ||||| || || |||||||| ||| | || |||
Sbjct: 72986999 ggcaacaactgggccaagggccactacacagagggcgccgagctggtggacgcggttctg 72986940

                                                                            
Query: 525      gatgtggttcggaaggaggctgagagctgtgactgccttcagggcttccagctgacccac 584
                || ||||| ||||||||||| ||||||||||||||||| ||||||||||| |||||||||
Sbjct: 72986939 gacgtggtccggaaggaggcggagagctgtgactgcctgcagggcttccaactgacccac 72986880

                                                                            
Query: 585      tcgctgggcggtggcacaggctctggaatgggcactttgctcatcagcaagatccgtgaa 644
                ||||||||||||||||| || || || ||||| ||  ||||||||||||||||||| || 
Sbjct: 72986879 tcgctgggcggtggcacggggtccggcatggggaccctgctcatcagcaagatccgcgag 72986820

                                                                            
Query: 645      gaatatcccgaccgcatcatgaataccttcagtgtcgtgccctcacccaaagtgtctgac 704
                || |  || ||||| |||||||| |||||||| || || ||||| ||||| |||||||||
Sbjct: 72986819 gagttcccggaccggatcatgaacaccttcagcgtggtaccctcccccaaggtgtctgac 72986760

                                                                            
Query: 705      accgtggttgagccctacaacgccaccctctctgtccatcagttggtggagaacactgat 764
                || ||||| ||||||||||||||||| || || || || ||| ||||||||||||| |||
Sbjct: 72986759 acggtggtggagccctacaacgccacgctgtcggttcaccagctggtggagaacacggat 72986700

                                                                            
Query: 765      gagacctactgcatcgacaatgaggccctttacgacatctgcttccgcactctcaagctg 824
                |||||||||||||||||||| ||||| || |||||||||||||||||||| || ||||||
Sbjct: 72986699 gagacctactgcatcgacaacgaggcgctctacgacatctgcttccgcaccctgaagctg 72986640

                                                                            
Query: 825      accacgccaacctatggggacctgaaccaccttgtctctgccaccatgagtggtgtcacc 884
                ||||| || ||||| || ||||| |||||||| || || ||||||||||| || ||||||
Sbjct: 72986639 accacccccacctacggcgacctcaaccacctggtgtcggccaccatgagcggggtcacc 72986580

                                                                            
Query: 885      acctgcctccgcttccctggccagctcaatgctgacctccgcaagctggcagtcaatatg 944
                || ||||| |||||||| ||||||||||| || ||||| ||||||||||| || || |||
Sbjct: 72986579 acgtgcctgcgcttcccgggccagctcaacgccgacctgcgcaagctggccgtgaacatg 72986520

                                                                            
Query: 945      gtgcccttcccacgtctccacttcttcatgcccggctttgcccctctgaccagccgtgga 1004
                ||||||||||| || || |||||||||||||| |||||||| || ||||||||||| || 
Sbjct: 72986519 gtgcccttcccccgcctgcacttcttcatgccgggctttgcgccgctgaccagccggggc 72986460

                                                                            
Query: 1005     agccagcagtaccgggccctcactgtgcctgagctcacccagcaggtcttcgatgccaag 1064
                ||||||||||||||||| || || ||||| || |||||||||||| | ||||| ||||||
Sbjct: 72986459 agccagcagtaccgggcactgacggtgcccgaactcacccagcagatgttcgacgccaag 72986400

                                                                            
Query: 1065     aacatgatggctgcctgtgacccccgccatggccggtacctcactgtggctgctgtcttc 1124
                ||||||||||| ||||| ||||||||||| ||||| ||||| || ||||| ||||| |||
Sbjct: 72986399 aacatgatggccgcctgcgacccccgccacggccgctacctgaccgtggccgctgtgttc 72986340

                                                                            
Query: 1125     cgtgggcgcatgtccatgaaggaggtggatgagcagatgctcaacgtgcagaacaagaat 1184
                || || ||||||||||||||||||||||||||||||||||| | ||| |||| |||||| 
Sbjct: 72986339 cggggccgcatgtccatgaaggaggtggatgagcagatgctgagcgtccagagcaagaac 72986280

                                                                            
Query: 1185     agcagctacttcgtagaatggatccccaacaatgtcaagacggctgtctgcgatatccct 1244
                |||||||||||||| || ||||| |||||||| ||||||||||| || ||||| ||||| 
Sbjct: 72986279 agcagctacttcgtggagtggattcccaacaacgtcaagacggccgtgtgcgacatcccg 72986220

                                                                            
Query: 1245     ccccgtggcctcaagatggcggtcaccttcatcggcaacagcacggccatccaggagcta 1304
                ||||||||||| |||||||| | ||| |||||||||||||||||||||||||||||||| 
Sbjct: 72986219 ccccgtggcctgaagatggccgccactttcatcggcaacagcacggccatccaggagctg 72986160

                                                                            
Query: 1305     ttcaagcgcatctcagagcagttcactgccatgttccgccgaaaggccttcctccactgg 1364
                |||||||||||||| || |||||||| ||||||||||| || ||||||||||| ||||||
Sbjct: 72986159 ttcaagcgcatctccgaacagttcacggccatgttccggcgcaaggccttcctgcactgg 72986100

                                                                            
Query: 1365     tacacaggtgagggcatggacgagatggagttcactgaggctgagagcaacatgaatgac 1424
                ||||| || ||||||||||| |||||||||||||||||||| |||||||||||||| |||
Sbjct: 72986099 tacacgggcgagggcatggatgagatggagttcactgaggcagagagcaacatgaacgac 72986040

                                                   
Query: 1425     ctcgtctctgagtaccagcagtaccaggatgccac 1459
                || || || ||||||||||||||||||||||||||
Sbjct: 72986039 ctggtgtccgagtaccagcagtaccaggatgccac 72986005



 Score =  989 bits (499), Expect = 0.0
 Identities = 871/995 (87%)
 Strand = Plus / Minus

                                                                            
Query: 465      ggcaacaactgggccaagggccactatacagaaggggctgagctggttgactcagtcctg 524
                |||||||||||||||||||||||||| ||||| || || |||||||| ||| | || |||
Sbjct: 73065516 ggcaacaactgggccaagggccactacacagagggcgccgagctggtggacgcggttctg 73065457

                                                                            
Query: 525      gatgtggttcggaaggaggctgagagctgtgactgccttcagggcttccagctgacccac 584
                || ||||| ||||||||||| ||||||||||||||||| ||||||||||| |||||||||
Sbjct: 73065456 gacgtggtccggaaggaggcggagagctgtgactgcctgcagggcttccaactgacccac 73065397

                                                                            
Query: 585      tcgctgggcggtggcacaggctctggaatgggcactttgctcatcagcaagatccgtgaa 644
                ||||||||||||||||| || || || ||||| ||  ||||||||||||||||||| || 
Sbjct: 73065396 tcgctgggcggtggcacggggtccggcatggggaccctgctcatcagcaagatccgcgag 73065337

                                                                            
Query: 645      gaatatcccgaccgcatcatgaataccttcagtgtcgtgccctcacccaaagtgtctgac 704
                || |  || ||||| |||||||| |||||||| || || ||||| ||||| |||||||||
Sbjct: 73065336 gagttcccggaccggatcatgaacaccttcagcgtggtaccctcccccaaggtgtctgac 73065277

                                                                            
Query: 705      accgtggttgagccctacaacgccaccctctctgtccatcagttggtggagaacactgat 764
                || ||||| ||||||||||||||||| || || || || ||| ||||||||||||| |||
Sbjct: 73065276 acggtggtggagccctacaacgccacgctgtcggttcaccagctggtggagaacacggat 73065217

                                                                            
Query: 765      gagacctactgcatcgacaatgaggccctttacgacatctgcttccgcactctcaagctg 824
                |||||||||||||||||||| ||||| || |||||||||||||||||||| || ||||||
Sbjct: 73065216 gagacctactgcatcgacaacgaggcgctctacgacatctgcttccgcaccctgaagctg 73065157

                                                                            
Query: 825      accacgccaacctatggggacctgaaccaccttgtctctgccaccatgagtggtgtcacc 884
                ||||| || ||||| || ||||| |||||||| || || ||||||||||| || ||||||
Sbjct: 73065156 accacccccacctacggcgacctcaaccacctggtgtcggccaccatgagcggggtcacc 73065097

                                                                            
Query: 885      acctgcctccgcttccctggccagctcaatgctgacctccgcaagctggcagtcaatatg 944
                || ||||| |||||||| ||||||||||| || ||||| ||||||||||| || || |||
Sbjct: 73065096 acgtgcctgcgcttcccgggccagctcaacgccgacctgcgcaagctggccgtgaacatg 73065037

                                                                            
Query: 945      gtgcccttcccacgtctccacttcttcatgcccggctttgcccctctgaccagccgtgga 1004
                ||||||||||| || || |||||||||||||| |||||||| || ||||||||||| || 
Sbjct: 73065036 gtgcccttcccccgcctgcacttcttcatgccgggctttgcgccgctgaccagccggggc 73064977

                                                                            
Query: 1005     agccagcagtaccgggccctcactgtgcctgagctcacccagcaggtcttcgatgccaag 1064
                ||||||||||||||||| || || ||||| || |||||||||||| | ||||| ||||||
Sbjct: 73064976 agccagcagtaccgggcactgacggtgcccgaactcacccagcagatgttcgacgccaag 73064917

                                                                            
Query: 1065     aacatgatggctgcctgtgacccccgccatggccggtacctcactgtggctgctgtcttc 1124
                ||||||||||| ||||| ||||||||||| ||||| ||||| || ||||| ||||| |||
Sbjct: 73064916 aacatgatggccgcctgcgacccccgccacggccgctacctgaccgtggccgctgtgttc 73064857

                                                                            
Query: 1125     cgtgggcgcatgtccatgaaggaggtggatgagcagatgctcaacgtgcagaacaagaat 1184
                || || ||||||||||||||||||||||||||||||||||| | ||| |||| |||||| 
Sbjct: 73064856 cggggccgcatgtccatgaaggaggtggatgagcagatgctgagcgtccagagcaagaac 73064797

                                                                            
Query: 1185     agcagctacttcgtagaatggatccccaacaatgtcaagacggctgtctgcgatatccct 1244
                |||||||||||||| || ||||| |||||||| ||||||||||| || ||||| ||||| 
Sbjct: 73064796 agcagctacttcgtggagtggattcccaacaacgtcaagacggccgtgtgcgacatcccg 73064737

                                                                            
Query: 1245     ccccgtggcctcaagatggcggtcaccttcatcggcaacagcacggccatccaggagcta 1304
                ||||||||||| |||||||| | ||| |||||||||||||||||||||||||||||||| 
Sbjct: 73064736 ccccgtggcctgaagatggccgccactttcatcggcaacagcacggccatccaggagctg 73064677

                                                                            
Query: 1305     ttcaagcgcatctcagagcagttcactgccatgttccgccgaaaggccttcctccactgg 1364
                |||||||||||||| || |||||||| ||||||||||| || ||||||||||| ||||||
Sbjct: 73064676 ttcaagcgcatctccgaacagttcacggccatgttccggcgcaaggccttcctgcactgg 73064617

                                                                            
Query: 1365     tacacaggtgagggcatggacgagatggagttcactgaggctgagagcaacatgaatgac 1424
                ||||| || ||||||||||| |||||||||||||||||||| |||||||||||||| |||
Sbjct: 73064616 tacacgggcgagggcatggatgagatggagttcactgaggcagagagcaacatgaacgac 73064557

                                                   
Query: 1425     ctcgtctctgagtaccagcagtaccaggatgccac 1459
                || || || ||||||||||||||||||||||||||
Sbjct: 73064556 ctggtgtccgagtaccagcagtaccaggatgccac 73064522



 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 97/113 (85%)
 Strand = Plus / Minus

                                                                            
Query: 229      agttctgggaggtgatcagtgatgaacatggcatcgaccccaccggcacctatcatgggg 288
                |||| |||||||||||||||||||| |||||||| || ||||| ||||| || || ||||
Sbjct: 73084374 agttttgggaggtgatcagtgatgagcatggcattgatcccactggcacataccacgggg 73084315

                                                                     
Query: 289      acagcgacctgcagctggaccgcatctccgtgtactacaatgaagccacaggt 341
                |||||||||||||| ||||  | |||  ||| ||||||||||| |||||||||
Sbjct: 73084314 acagcgacctgcagttggagaggatcaacgtctactacaatgaggccacaggt 73084262



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 46/51 (90%)
 Strand = Plus / Plus

                                                                   
Query: 1133     catgtccatgaaggaggtggatgagcagatgctcaacgtgcagaacaagaa 1183
                |||||||||||||||||||||  |||||||||| || || |||||||||||
Sbjct: 96325399 catgtccatgaaggaggtggacaagcagatgcttaatgtccagaacaagaa 96325449



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 46/51 (90%)
 Strand = Plus / Plus

                                                                   
Query: 1133     catgtccatgaaggaggtggatgagcagatgctcaacgtgcagaacaagaa 1183
                |||||||||||||||||||||  |||||||||| || || |||||||||||
Sbjct: 96491769 catgtccatgaaggaggtggacaagcagatgcttaatgtccagaacaagaa 96491819


>Sscrofa_Chr06 
||          Length = 157765593

 Score =  950 bits (479), Expect = 0.0
 Identities = 866/995 (87%)
 Strand = Plus / Plus

                                                                            
Query: 465      ggcaacaactgggccaagggccactatacagaaggggctgagctggttgactcagtcctg 524
                |||||||||||||||||||||||||| || || || || |||||| | ||||||||||||
Sbjct: 90812916 ggcaacaactgggccaagggccactacacggagggtgcggagctgatggactcagtcctg 90812975

                                                                            
Query: 525      gatgtggttcggaaggaggctgagagctgtgactgccttcagggcttccagctgacccac 584
                |||||||| |||||||||   |||  ||| |||||||| |||||||||||||| ||||||
Sbjct: 90812976 gatgtggtgcggaaggagagcgagcactgcgactgcctgcagggcttccagctcacccac 90813035

                                                                            
Query: 585      tcgctgggcggtggcacaggctctggaatgggcactttgctcatcagcaagatccgtgaa 644
                ||||||||||||||||||||||| || |||||||| |||||||||||||||||||| || 
Sbjct: 90813036 tcgctgggcggtggcacaggctccgggatgggcaccttgctcatcagcaagatccgagag 90813095

                                                                            
Query: 645      gaatatcccgaccgcatcatgaataccttcagtgtcgtgccctcacccaaagtgtctgac 704
                || |  || || ||||||||||| |||||||| ||| ||||||||||||| ||||| |||
Sbjct: 90813096 gagttccctgatcgcatcatgaacaccttcagcgtcatgccctcacccaaggtgtcagac 90813155

                                                                            
Query: 705      accgtggttgagccctacaacgccaccctctctgtccatcagttggtggagaacactgat 764
                || ||||| ||||||||||||||||| || || || || ||| ||||||||||||| |||
Sbjct: 90813156 acggtggtcgagccctacaacgccacgctgtccgtgcaccagctggtggagaacacggat 90813215

                                                                            
Query: 765      gagacctactgcatcgacaatgaggccctttacgacatctgcttccgcactctcaagctg 824
                |||||||||||||||||||| |||||||| || ||||||||||||||||| || ||||||
Sbjct: 90813216 gagacctactgcatcgacaacgaggccctgtatgacatctgcttccgcaccctgaagctg 90813275

                                                                            
Query: 825      accacgccaacctatggggacctgaaccaccttgtctctgccaccatgagtggtgtcacc 884
                |||||||| ||||| |||||||| |||||||| || || |||||||||||||| ||||||
Sbjct: 90813276 accacgcctacctacggggacctcaaccacctggtgtcggccaccatgagtggggtcacc 90813335

                                                                            
Query: 885      acctgcctccgcttccctggccagctcaatgctgacctccgcaagctggcagtcaatatg 944
                |||| ||| ||||| || ||||||||||| |||||||| ||||||||||| || || |||
Sbjct: 90813336 acctccctgcgctttccaggccagctcaacgctgacctgcgcaagctggctgtgaacatg 90813395

                                                                            
Query: 945      gtgcccttcccacgtctccacttcttcatgcccggctttgcccctctgaccagccgtgga 1004
                || ||||||||||| || |||||||||||||||||||| || || || |||  ||| || 
Sbjct: 90813396 gtccccttcccacgcctgcacttcttcatgcccggcttcgcgccgctaaccgcccggggc 90813455

                                                                            
Query: 1005     agccagcagtaccgggccctcactgtgcctgagctcacccagcaggtcttcgatgccaag 1064
                |||||||||||||| ||||| || ||||| ||||||||||||||| | ||||||||||||
Sbjct: 90813456 agccagcagtaccgcgccctgacagtgccagagctcacccagcagatgttcgatgccaag 90813515

                                                                            
Query: 1065     aacatgatggctgcctgtgacccccgccatggccggtacctcactgtggctgctgtcttc 1124
                ||||||||||| ||||| ||||| ||||| ||||| ||||| || |||||  ||||||||
Sbjct: 90813516 aacatgatggccgcctgcgaccctcgccacggccgctacctgaccgtggccactgtcttc 90813575

                                                                            
Query: 1125     cgtgggcgcatgtccatgaaggaggtggatgagcagatgctcaacgtgcagaacaagaat 1184
                 | || | ||||||||||||||||||||| |||||||||||   | | ||||||||||| 
Sbjct: 90813576 aggggccccatgtccatgaaggaggtggacgagcagatgctggccatccagaacaagaac 90813635

                                                                            
Query: 1185     agcagctacttcgtagaatggatccccaacaatgtcaagacggctgtctgcgatatccct 1244
                |||||||||||||| || ||||||||||||||||| |||  ||| || ||||| ||||| 
Sbjct: 90813636 agcagctacttcgtggagtggatccccaacaatgtgaaggtggccgtgtgcgacatcccg 90813695

                                                                            
Query: 1245     ccccgtggcctcaagatggcggtcaccttcatcggcaacagcacggccatccaggagcta 1304
                ||  ||||||| |||||||| | ||||||||||||||||||||| |||||||||||||| 
Sbjct: 90813696 ccatgtggcctgaagatggctgccaccttcatcggcaacagcacagccatccaggagctg 90813755

                                                                            
Query: 1305     ttcaagcgcatctcagagcagttcactgccatgttccgccgaaaggccttcctccactgg 1364
                |||||||||||||||||||||||| | |||||||| || || ||||||||||| ||||||
Sbjct: 90813756 ttcaagcgcatctcagagcagttctcggccatgtttcggcgcaaggccttcctgcactgg 90813815

                                                                            
Query: 1365     tacacaggtgagggcatggacgagatggagttcactgaggctgagagcaacatgaatgac 1424
                | ||| || |||||||||||||||||||||||||| |||||||||||||||||||| |||
Sbjct: 90813816 ttcacgggcgagggcatggacgagatggagttcaccgaggctgagagcaacatgaacgac 90813875

                                                   
Query: 1425     ctcgtctctgagtaccagcagtaccaggatgccac 1459
                || || || |||||||||||||||||||| |||||
Sbjct: 90813876 ctggtgtccgagtaccagcagtaccaggacgccac 90813910



 Score =  872 bits (440), Expect = 0.0
 Identities = 872/1016 (85%)
 Strand = Plus / Plus

                                                                          
Query: 458    tggggcaggcaacaactgggccaagggccactatacagaaggggctgagctggttgactc 517
              |||||| ||||||||||||||||| || ||||| || || || || |||||||| |||||
Sbjct: 267339 tggggctggcaacaactgggccaaaggtcactacacggagggcgcggagctggtggactc 267398

                                                                          
Query: 518    agtcctggatgtggttcggaaggaggctgagagctgtgactgccttcagggcttccagct 577
               |||||||| ||||| |||||||||  |||||  || |||||||| ||||||||||||||
Sbjct: 267399 ggtcctggacgtggtgcggaaggagtgtgagaattgcgactgcctgcagggcttccagct 267458

                                                                          
Query: 578    gacccactcgctgggcggtggcacaggctctggaatgggcactttgctcatcagcaagat 637
               |||||||| ||||| || ||||| ||||| || ||||||||  |||||||||||||| |
Sbjct: 267459 cacccactctctggggggcggcacgggctccgggatgggcaccctgctcatcagcaaggt 267518

                                                                          
Query: 638    ccgtgaagaatatcccgaccgcatcatgaataccttcagtgtcgtgccctcacccaaagt 697
              ||| || || || || |||||||||||||| |||||||| || |||||||| ||||| ||
Sbjct: 267519 ccgcgaggagtaccctgaccgcatcatgaacaccttcagcgtggtgccctcgcccaaggt 267578

                                                                          
Query: 698    gtctgacaccgtggttgagccctacaacgccaccctctctgtccatcagttggtggagaa 757
              ||| ||||| ||||| ||||||||||||||||| || ||  |||| ||| ||||||||||
Sbjct: 267579 gtcggacacggtggtcgagccctacaacgccacgctgtccatccaccagctggtggagaa 267638

                                                                          
Query: 758    cactgatgagacctactgcatcgacaatgaggccctttacgacatctgcttccgcactct 817
              ||| || |||||||||||||||||||| |||||||| |||||||||||||||||||| ||
Sbjct: 267639 cacggacgagacctactgcatcgacaacgaggccctgtacgacatctgcttccgcaccct 267698

                                                                          
Query: 818    caagctgaccacgccaacctatggggacctgaaccaccttgtctctgccaccatgagtgg 877
              ||||||| ||||||| ||||| |||||||| |||||||| || || ||||||||||| ||
Sbjct: 267699 caagctggccacgcccacctacggggacctcaaccacctggtgtcggccaccatgagcgg 267758

                                                                          
Query: 878    tgtcaccacctgcctccgcttccctggccagctcaatgctgacctccgcaagctggcagt 937
               |||||||||| ||| |||||||| ||||||||||| || ||||| ||||||||||| ||
Sbjct: 267759 ggtcaccacctccctgcgcttcccgggccagctcaacgccgacctgcgcaagctggccgt 267818

                                                                          
Query: 938    caatatggtgcccttcccacgtctccacttcttcatgcccggctttgcccctctgaccag 997
               || |||||||||||||| || || |||||||||||||||||||| || || || ||   
Sbjct: 267819 gaacatggtgcccttcccgcgcctgcacttcttcatgcccggcttcgcgccgctcactgc 267878

                                                                          
Query: 998    ccgtggaagccagcagtaccgggccctcactgtgcctgagctcacccagcaggtcttcga 1057
              ||| || |||||||||||||| || || || ||||| |||||||| |||||| | |||||
Sbjct: 267879 ccggggcagccagcagtaccgcgcgctgacggtgcccgagctcacgcagcagatgttcga 267938

                                                                          
Query: 1058   tgccaagaacatgatggctgcctgtgacccccgccatggccggtacctcactgtggctgc 1117
               ||||||||||||||||| ||||| ||||| ||||| ||||| ||||| || |||||  |
Sbjct: 267939 cgccaagaacatgatggccgcctgcgacccgcgccacggccgctacctgaccgtggccac 267998

                                                                          
Query: 1118   tgtcttccgtgggcgcatgtccatgaaggaggtggatgagcagatgctcaacgtgcagaa 1177
               |||||||| |||||||||||||||||||||||||| |||||||||||   | | |||| 
Sbjct: 267999 cgtcttccgagggcgcatgtccatgaaggaggtggacgagcagatgctggccatccagag 268058

                                                                          
Query: 1178   caagaatagcagctacttcgtagaatggatccccaacaatgtcaagacggctgtctgcga 1237
              |||||| |||||||||||||| || |||||||||||||| || |||  ||| || |||||
Sbjct: 268059 caagaacagcagctacttcgtggagtggatccccaacaacgtgaaggtggccgtgtgcga 268118

                                                                          
Query: 1238   tatccctccccgtggcctcaagatggcggtcaccttcatcggcaacagcacggccatcca 1297
               ||||| || || |||||||||||| |   ||||||||||||||||||||||||||||||
Sbjct: 268119 catcccgccgcgcggcctcaagatgtcctccaccttcatcggcaacagcacggccatcca 268178

                                                                          
Query: 1298   ggagctattcaagcgcatctcagagcagttcactgccatgttccgccgaaaggccttcct 1357
              |||||| |||||||||||||| ||||||||||| ||||||||||| || |||||||||||
Sbjct: 268179 ggagctgttcaagcgcatctcggagcagttcacggccatgttccggcgcaaggccttcct 268238

                                                                          
Query: 1358   ccactggtacacaggtgagggcatggacgagatggagttcactgaggctgagagcaacat 1417
               ||||||||||| || |||||||||||||||||||||||||| ||||| |||||||||||
Sbjct: 268239 gcactggtacacgggcgagggcatggacgagatggagttcaccgaggccgagagcaacat 268298

                                                                      
Query: 1418   gaatgacctcgtctctgagtaccagcagtaccaggatgccaccgcagaagaggagg 1473
              ||| ||||| || || |||||||||||||||||||| ||||| || || |||||||
Sbjct: 268299 gaacgacctggtgtccgagtaccagcagtaccaggacgccacggccgacgaggagg 268354



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 52/57 (91%)
 Strand = Plus / Plus

                                                                       
Query: 174    atgagggaaatcgtgcatatccaggccggtcagtgtggcaaccagatcggtgccaag 230
              |||||||| |||||||| ||||||||||| ||||| |||||||||||||| ||||||
Sbjct: 259478 atgagggagatcgtgcacatccaggccggccagtgcggcaaccagatcggggccaag 259534



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 83/100 (83%)
 Strand = Plus / Plus

                                                                          
Query: 229    agttctgggaggtgatcagtgatgaacatggcatcgaccccaccggcacctatcatgggg 288
              |||||||||| |||||||| |||||||| ||||| |||||||  |||| ||||   ||||
Sbjct: 265876 agttctgggaagtgatcagcgatgaacacggcatagaccccagtggcaactatgtggggg 265935

                                                      
Query: 289    acagcgacctgcagctggaccgcatctccgtgtactacaa 328
              ||   |||||||||||||| ||||||  ||| ||||||||
Sbjct: 265936 actcggacctgcagctggagcgcatcagcgtctactacaa 265975


>Sscrofa_Chr17 
||          Length = 69701581

 Score =  343 bits (173), Expect = 3e-91
 Identities = 682/849 (80%), Gaps = 2/849 (0%)
 Strand = Plus / Plus

                                                                            
Query: 456      tctggggcaggcaacaactgggccaagggccactatacagaaggggctgagctggttgac 515
                |||||||| |||||||||||||||||||||||||| || || ||||| |||||||| || 
Sbjct: 66536030 tctggggccggcaacaactgggccaagggccactacacggagggggccgagctggtggag 66536089

                                                                            
Query: 516      tcagtcctggatgtggttcggaaggaggctgagagctgtgactgccttcagggcttccag 575
                   || ||||| |  || || |  ||||| ||| |||| |||||||| ||||||||||||
Sbjct: 66536090 ggcgtgctggacgccgtgcgcagcgaggccgagggctgcgactgcctgcagggcttccag 66536149

                                                                            
Query: 576      ctgacccactcgctgggcggtggcacaggctctggaatgggcactttgctcatcagcaag 635
                 ||   |||||||||||||| ||||| || || || ||||||||  |||||||  |||||
Sbjct: 66536150 gtggtgcactcgctgggcggcggcacggggtccgggatgggcacgctgctcatgggcaag 66536209

                                                                            
Query: 636      atccgtgaagaatatcccgaccgcatcatgaataccttcagtgtcgtgccctcacccaaa 695
                ||||| || || |  || ||||||||| | ||  ||||||| ||| |||||||  |||| 
Sbjct: 66536210 atccgcgaggagttcccggaccgcatcctcaactccttcagcgtcatgccctcggccaag 66536269

                                                                            
Query: 696      gtgtctgacaccgtggttgagccctacaacgccaccctctctgtccatcagttggtggag 755
                ||||| ||||| ||||| |||||||||||||||   || ||  |||| ||| || || ||
Sbjct: 66536270 gtgtcggacacggtggtggagccctacaacgccgtgctgtccatccaccagctgctgcag 66536329

                                                                            
Query: 756      aacactgatgagacctactgcatcgacaatgaggccctttacgacatctgcttccgcact 815
                ||| | || |    || |||||||||||| ||||| || ||||||||||||| |||||| 
Sbjct: 66536330 aacgccgacgcctgcttctgcatcgacaacgaggcgctctacgacatctgctgccgcacc 66536389

                                                                            
Query: 816      ctcaagctgaccacgccaacctatggggacctgaaccaccttgtctctgccaccatgagt 875
                || | |||||||||||| ||||| || ||||| |||||||| || ||    |||||||| 
Sbjct: 66536390 ctgaggctgaccacgcccacctacggcgacctcaaccacctggtgtcgctgaccatgagc 66536449

                                                                            
Query: 876      ggtgtcaccacctgcctccgcttccctggccagctcaatgctgacctccgcaagctggca 935
                || |||||||| |  || |||||||| ||||||||||| || ||||| ||||||||||| 
Sbjct: 66536450 ggcgtcaccacgtcgctgcgcttccccggccagctcaacgccgacctgcgcaagctggcc 66536509

                                                                            
Query: 936      gtcaatatggtgcccttcccacgtctccacttcttcatgcccggctttgcccctctgacc 995
                || || |||||||||||||| || || |||||||||||||||||||| || || || |||
Sbjct: 66536510 gtgaacatggtgcccttcccgcgcctgcacttcttcatgcccggcttcgcgccgctcacc 66536569

                                                                            
Query: 996      agccgtggaagccagcagtaccgggccctcactgtgcctgagctcacccagcaggtcttc 1055
                  ||  || |||||||||||||| || || || ||| | ||||||||||||||| | |||
Sbjct: 66536570 gcccagggcagccagcagtaccgcgcgctgaccgtggccgagctcacccagcagatgttc 66536629

                                                                            
Query: 1056     gatgccaagaacatgatggctgcctgtgacccccgccatggccggtacctcactgtggc- 1114
                || |||   ||||  ||| | ||||| ||||||||||  ||||| ||||| || ||||| 
Sbjct: 66536630 gacgcccgcaacaccatgaccgcctgcgacccccgccgcggccgctacctgaccgtggcc 66536689

                                                                            
Query: 1115     tgctgtcttccgtgggcgcatgtccatgaaggaggtggatgagcagatgctcaacgtgca 1174
                |||  ||||||| ||||  |||||||  ||||| ||||| |||||| |||||| ||||||
Sbjct: 66536690 tgca-tcttccgggggcagatgtccaccaaggaagtggacgagcagctgctcaccgtgca 66536748

                                                                            
Query: 1175     gaacaagaatagcagctacttcgtagaatggatccccaacaatgtcaagacggctgtctg 1234
                || || ||| ||||||| |||||| || ||||||||||||||  |||||  ||| || ||
Sbjct: 66536749 gaccaggaacagcagctgcttcgtggagtggatccccaacaacctcaaggtggccgtgtg 66536808

                                                                            
Query: 1235     cgatatccctccccgtggcctcaagatggcggtcaccttcatcggcaacagcacggccat 1294
                ||| ||||| ||||| || || |  ||||||| |||||||||||||||||||||||||||
Sbjct: 66536809 cgacatcccgccccgggggctgagcatggcggccaccttcatcggcaacagcacggccat 66536868

                         
Query: 1295     ccaggagct 1303
                |||||||||
Sbjct: 66536869 ccaggagct 66536877


>gb|GL895527.2| Sus scrofa unplaced genomic scaffold ChrUScaf3411
          Length = 22714

 Score =  230 bits (116), Expect = 3e-57
 Identities = 206/236 (87%)
 Strand = Plus / Minus

                                                                       
Query: 465 ggcaacaactgggccaagggccactatacagaaggggctgagctggttgactcagtcctg 524
           |||||||||||||||||||||||||| || || || || |||||| | ||||||||||||
Sbjct: 469 ggcaacaactgggccaagggccactacacggagggtgcggagctgatggactcagtcctg 410

                                                                       
Query: 525 gatgtggttcggaaggaggctgagagctgtgactgccttcagggcttccagctgacccac 584
           |||||||| |||||||||   |||  ||| |||||||| |||||||||||||| ||||||
Sbjct: 409 gatgtggtgcggaaggagagcgagcactgcgactgcctgcagggcttccagctcacccac 350

                                                                       
Query: 585 tcgctgggcggtggcacaggctctggaatgggcactttgctcatcagcaagatccgtgaa 644
           ||||||||||||||||||||||| || |||||||| |||||||||||||||||||| || 
Sbjct: 349 tcgctgggcggtggcacaggctccgggatgggcaccttgctcatcagcaagatccgagag 290

                                                                   
Query: 645 gaatatcccgaccgcatcatgaataccttcagtgtcgtgccctcacccaaagtgtc 700
           || |  || || ||||||||||| |||||||| ||| ||||||||||||| |||||
Sbjct: 289 gagttccctgatcgcatcatgaacaccttcagcgtcatgccctcacccaaggtgtc 234



 Score =  135 bits (68), Expect = 1e-28
 Identities = 116/132 (87%)
 Strand = Plus / Minus

                                                                       
Query: 850 accaccttgtctctgccaccatgagtggtgtcaccacctgcctccgcttccctggccagc 909
           ||||||| || || |||||||||||||| |||||||||| ||| ||||| || |||||||
Sbjct: 132 accacctggtgtcggccaccatgagtggggtcaccacctccctgcgctttccaggccagc 73

                                                                       
Query: 910 tcaatgctgacctccgcaagctggcagtcaatatggtgcccttcccacgtctccacttct 969
           |||| |||||||| ||||||||||| || || ||||| ||||||||||| || |||||||
Sbjct: 72  tcaacgctgacctgcgcaagctggctgtgaacatggtccccttcccacgcctgcacttct 13

                       
Query: 970 tcatgcccggct 981
           ||||||||||||
Sbjct: 12  tcatgcccggct 1


  Database: Sscrofa_10.2.fasta
    Posted date:  Nov 16, 2011 10:34 AM
  Number of letters in database: 2,808,509,378
  Number of sequences in database:  4582
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 68,889,332
Number of extensions: 533
Number of successful extensions: 533
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 523
Number of HSP's successfully gapped: 25
Length of query: 2448
Length of database: 2,808,509,378
Length adjustment: 22
Effective length of query: 2426
Effective length of database: 2,808,408,574
Effective search space: 6813199200524
Effective search space used: 6813199200524
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)