Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-006985
(1517 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_788817.1| cholesterol side-chain cleavage enzyme, mitocho... 699 0.0
Alignment gi|NP_777063.2| cytochrome P450 11B1, mitochondrial precursor [... 258 1e-68
Alignment gi|NP_001179213.1| 25-hydroxyvitamin D-1 alpha hydroxylase, mit... 179 8e-45
Alignment gi|XP_002687602.1| PREDICTED: cytochrome P450, family 27, subfa... 179 8e-45
Alignment gi|XP_002692552.1| PREDICTED: cytochrome P450, family 24, subfa... 170 3e-42
Alignment gi|XP_591370.3| PREDICTED: cytochrome P450, family 24, subfamil... 169 5e-42
Alignment gi|XP_002692553.1| PREDICTED: cytochrome P450, family 24, subfa... 164 1e-40
Alignment gi|NP_001178346.1| 1,25-dihydroxyvitamin D(3) 24-hydroxylase, m... 164 3e-40
Alignment gi|XP_002685263.1| PREDICTED: FLJ16008 protein-like [Bos taurus]. 154 3e-37
Alignment gi|XP_874669.3| PREDICTED: FLJ16008 protein-like [Bos taurus]. 154 3e-37
>ref|NP_788817.1| cholesterol side-chain cleavage enzyme, mitochondrial precursor [Bos
taurus].
Length = 520
Score = 699 bits (1805), Expect = 0.0
Identities = 346/443 (78%), Positives = 384/443 (86%), Gaps = 13/443 (2%)
Frame = +1
Query: 226 MLARGLALRSVLVKGCQPFLSAPRECPGHPRVGTGEGACISTKTPRPFSEIPSPGDNGWI 405
MLARGL LRS LVK C P LS E GH RVGTGEGA ISTKTPRP+SEIPSPGDNGW+
Sbjct: 1 MLARGLPLRSALVKACPPILSTVGEGWGHHRVGTGEGAGISTKTPRPYSEIPSPGDNGWL 60
Query: 406 NLYRFWKEKGTQKIHYHHVQNFQKYGPIYREKLGNLESVYIIDPEDVALLFKFEGPNPER 585
NLY FW+EKG+Q+IH+ H++NFQKYGPIYREKLGNLESVYII PEDVA LFKFEG PER
Sbjct: 61 NLYHFWREKGSQRIHFRHIENFQKYGPIYREKLGNLESVYIIHPEDVAHLFKFEGSYPER 120
Query: 586 YNIPPWVAYHQHYQKPVGVLLKKSGAWKKDRLVLNTEVMAPEAIKNFIPLLDTVSQDFVG 765
Y+IPPW+AYH++YQKP+GVL KKSG WKKDR+VLNTEVMAPEAIKNFIPLL+ VSQDFV
Sbjct: 121 YDIPPWLAYHRYYQKPIGVLFKKSGTWKKDRVVLNTEVMAPEAIKNFIPLLNPVSQDFVS 180
Query: 766 VLHRRIKQQGSGKF-------------SAITNVIFGERLGMLEEIVDPEAQKFIDAVYQM 906
+LH+RIKQQGSGKF +ITNV+FGERLGMLEE V+PEAQKFIDAVY+M
Sbjct: 181 LLHKRIKQQGSGKFVGDIKEDLFHFAFESITNVMFGERLGMLEETVNPEAQKFIDAVYKM 240
Query: 907 FHTSVPMLNLPPDLFRLFRTKTWRDHVAAWDTIFNKAEKYTQNFYWDLRRKREFNNYPGI 1086
FHTSVP+LN+PP+L+RLFRTKTWRDHVAAWDTIFNKAEKYT+ FY DLRRK EF NYPGI
Sbjct: 241 FHTSVPLLNVPPELYRLFRTKTWRDHVAAWDTIFNKAEKYTEIFYQDLRRKTEFRNYPGI 300
Query: 1087 LYRLLGNDKLLSEDVKANVTEMLAGGVDTTSMTLQWHLYEMARSLNVQEMLREEVLNARR 1266
LY LL ++K+L EDVKAN+TEMLAGGV+TTSMTLQWHLYEMARSLNVQEMLREEVLNARR
Sbjct: 301 LYCLLKSEKMLLEDVKANITEMLAGGVNTTSMTLQWHLYEMARSLNVQEMLREEVLNARR 360
Query: 1267 QAQGDTSKMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLGSRDYMIPAKTLVQVAVYA 1446
QA+GD SKMLQ+VPLLKASIKETLRLHPISVTLQRY +DL +DY+IPAKTLVQVA+YA
Sbjct: 361 QAEGDISKMLQMVPLLKASIKETLRLHPISVTLQRYPESDLVLQDYLIPAKTLVQVAIYA 420
Query: 1447 MGRDPPFFSKSXSLTXPXGWVXK 1515
MGRDP FFS S P W+ K
Sbjct: 421 MGRDPAFFS-SPDKFDPTRWLSK 442
>ref|NP_777063.2| cytochrome P450 11B1, mitochondrial precursor [Bos taurus].
Length = 503
Score = 258 bits (659), Expect = 1e-68
Identities = 141/409 (34%), Positives = 230/409 (56%), Gaps = 13/409 (3%)
Frame = +1
Query: 328 GEGACISTKTPRPFSEIPSPGDNGWINLYRFWKEKGTQKIHYHHVQNFQKYGPIYREKLG 507
G + K PF +P N W+ + + WKE+ ++ +H Q FQ+ GPI+R +G
Sbjct: 25 GTRGAAAPKAVLPFEAMPRCPGNKWMRMLQIWKEQSSENMHLDMHQTFQELGPIFRYDVG 84
Query: 508 NLESVYIIDPEDVALLFKFEGPNPERYNIPPWVAYHQHYQKPVGVLLKKSGAWKKDRLVL 687
V+++ PEDV L + + +P+R + PW+AY Q GV L W+ DRL L
Sbjct: 85 GRHMVFVMLPEDVERLQQADSHHPQRMILEPWLAYRQARGHKCGVFLLNGPQWRLDRLRL 144
Query: 688 NTEVMAPEAIKNFIPLLDTVSQDFVGVLHRRIKQQGSGKFS-------------AITNVI 828
N +V++ A++ + PL+D V++DF L R+ Q G + A T V+
Sbjct: 145 NPDVLSLPALQKYTPLVDGVARDFSQTLKARVLQNARGSLTLGHRAQLFRYTIEASTLVL 204
Query: 829 FGERLGMLEEIVDPEAQKFIDAVYQMFHTSVPMLNLPPDLFRLFRTKTWRDHVAAWDTIF 1008
+GERLG+L + +P++ FI A+ M ++V ++ +P L R T WR+H AWD IF
Sbjct: 205 YGERLGLLTQQPNPDSLNFIHALEAMLKSTVQLMFVPRRLSRWMSTNMWREHFEAWDYIF 264
Query: 1009 NKAEKYTQNFYWDLRRKREFNNYPGILYRLLGNDKLLSEDVKANVTEMLAGGVDTTSMTL 1188
A + Q Y +L ++ Y GI+ LL + + +KAN ++ AG VDTT+ L
Sbjct: 265 QYANRAIQRIYQELALGHPWH-YSGIVAELLMRADMTLDTIKANTIDLTAGSVDTTAFPL 323
Query: 1189 QWHLYEMARSLNVQEMLREEVLNARRQAQGDTSKMLQLVPLLKASIKETLRLHPISVTLQ 1368
L+E+AR+ VQ+ +R+E L A + + + + +PLL+A++KETLRL+P+ +TL+
Sbjct: 324 LMTLFELARNPEVQQAVRQESLVAEARISENPQRAITELPLLRAALKETLRLYPVGITLE 383
Query: 1369 RYLVNDLGSRDYMIPAKTLVQVAVYAMGRDPPFFSKSXSLTXPXGWVXK 1515
R + +DL ++Y IPA TLV+V +Y++GR+P F++ S P W+ +
Sbjct: 384 REVSSDLVLQNYHIPAGTLVKVLLYSLGRNPAVFARPESY-HPQRWLDR 431
>ref|NP_001179213.1| 25-hydroxyvitamin D-1 alpha hydroxylase, mitochondrial [Bos taurus].
Length = 508
Score = 179 bits (453), Expect = 8e-45
Identities = 130/423 (30%), Positives = 204/423 (48%), Gaps = 24/423 (5%)
Frame = +1
Query: 313 PRVGTGEGACISTKTPRPFSEIPSPGDNGWINLYRFWKEKGTQKIHYHHVQNFQKYGPIY 492
P +G G+ S PR ++IP P G+ L + + G ++H VQ ++GP++
Sbjct: 18 PELGASLGSRGSESAPRVLADIPGPSTPGF--LAELFCKGGLSRLHELQVQGAARFGPVW 75
Query: 493 REKLGNLESVYIIDPEDVALLFKFEGPNPERYNIPPWVAYHQHYQKPVGVLLKKSGAWKK 672
G + +VY+ P V L + EGP PER + PW + + Q+ G+L + W++
Sbjct: 76 LASFGTVRTVYLAAPTLVEQLLRQEGPRPERCSFSPWTEHRRRRQRACGLLTAEGEEWQR 135
Query: 673 DRLVLNTEVMAPEAIKNFIPLLDTVSQDFVGVLHRR---------IKQQGSGKF-----S 810
R +L ++ P+A + L V +D V L R+ + + +G+F
Sbjct: 136 LRSLLAPLLLRPQAAARYAGTLHGVVRDLVRRLRRQRGLGAGPPSLVRDVAGEFYKFGLE 195
Query: 811 AITNVIFGERLGMLEEIVDPEAQKFIDAVYQMFHTSVPMLNLPPDLFRLFRTKTWRDHVA 990
I V+ G RLG LE V P+ + FI AV +F +++ + +P L R+ W
Sbjct: 196 GIAAVLLGSRLGCLEAEVPPDTETFIRAVGSVFVSTLLTMAMPSWLHRVV-PGPWDRLCR 254
Query: 991 AWDTIFNKAEKYTQNFYWDL-----RRKREFNNYPG--ILYRLLGNDKLLSEDVKANVTE 1149
WD +F A+++ + ++ K E + PG + Y LL +L + + NVTE
Sbjct: 255 DWDQMFAFAQQHVEQREAEVAMRNQSEKSEEDMGPGAHLTYFLL-QKELPAASILGNVTE 313
Query: 1150 MLAGGVDTTSMTLQWHLYEMARSLNVQEMLREEV---LNARRQAQGDTSKMLQLVPLLKA 1320
+L GVDT S TL W LYE++R +Q L E+ L Q + + QL PLLKA
Sbjct: 314 LLLAGVDTVSNTLSWALYELSRHPEIQTALHAEITAALGPGSSTQPSATALSQL-PLLKA 372
Query: 1321 SIKETLRLHPISVTLQRYLVNDLGSRDYMIPAKTLVQVAVYAMGRDPPFFSKSXSLTXPX 1500
+KE LRL+P+ R D+ +Y+IP TLV + YA RDP F + S P
Sbjct: 373 VVKEVLRLYPVVPGNSRVPDRDICVGEYIIPKNTLVTLCHYATSRDPAQFPEPNSF-RPA 431
Query: 1501 GWV 1509
W+
Sbjct: 432 RWL 434
>ref|XP_002687602.1| PREDICTED: cytochrome P450, family 27, subfamily B, polypeptide 1
[Bos taurus].
Length = 508
Score = 179 bits (453), Expect = 8e-45
Identities = 130/423 (30%), Positives = 204/423 (48%), Gaps = 24/423 (5%)
Frame = +1
Query: 313 PRVGTGEGACISTKTPRPFSEIPSPGDNGWINLYRFWKEKGTQKIHYHHVQNFQKYGPIY 492
P +G G+ S PR ++IP P G+ L + + G ++H VQ ++GP++
Sbjct: 18 PELGASLGSRGSESAPRVLADIPGPSTPGF--LAELFCKGGLSRLHELQVQGAARFGPVW 75
Query: 493 REKLGNLESVYIIDPEDVALLFKFEGPNPERYNIPPWVAYHQHYQKPVGVLLKKSGAWKK 672
G + +VY+ P V L + EGP PER + PW + + Q+ G+L + W++
Sbjct: 76 LASFGTVRTVYLAAPTLVEQLLRQEGPRPERCSFSPWTEHRRRRQRACGLLTAEGEEWQR 135
Query: 673 DRLVLNTEVMAPEAIKNFIPLLDTVSQDFVGVLHRR---------IKQQGSGKF-----S 810
R +L ++ P+A + L V +D V L R+ + + +G+F
Sbjct: 136 LRSLLAPLLLRPQAAARYAGTLHGVVRDLVRRLRRQRGLGAGPPSLVRDVAGEFYKFGLE 195
Query: 811 AITNVIFGERLGMLEEIVDPEAQKFIDAVYQMFHTSVPMLNLPPDLFRLFRTKTWRDHVA 990
I V+ G RLG LE V P+ + FI AV +F +++ + +P L R+ W
Sbjct: 196 GIAAVLLGSRLGCLEAEVPPDTETFIRAVGSVFVSTLLTMAMPSWLHRVV-PGPWDRLCR 254
Query: 991 AWDTIFNKAEKYTQNFYWDL-----RRKREFNNYPG--ILYRLLGNDKLLSEDVKANVTE 1149
WD +F A+++ + ++ K E + PG + Y LL +L + + NVTE
Sbjct: 255 DWDQMFAFAQQHVEQREAEVAMRNQSEKSEEDMGPGAHLTYFLL-QKELPAASILGNVTE 313
Query: 1150 MLAGGVDTTSMTLQWHLYEMARSLNVQEMLREEV---LNARRQAQGDTSKMLQLVPLLKA 1320
+L GVDT S TL W LYE++R +Q L E+ L Q + + QL PLLKA
Sbjct: 314 LLLAGVDTVSNTLSWALYELSRHPEIQTALHAEITAALGPGSSTQPSATALSQL-PLLKA 372
Query: 1321 SIKETLRLHPISVTLQRYLVNDLGSRDYMIPAKTLVQVAVYAMGRDPPFFSKSXSLTXPX 1500
+KE LRL+P+ R D+ +Y+IP TLV + YA RDP F + S P
Sbjct: 373 VVKEVLRLYPVVPGNSRVPDRDICVGEYIIPKNTLVTLCHYATSRDPAQFPEPNSF-RPA 431
Query: 1501 GWV 1509
W+
Sbjct: 432 RWL 434
>ref|XP_002692552.1| PREDICTED: cytochrome P450, family 24, subfamily A, polypeptide
1-like isoform 1 [Bos taurus].
Length = 514
Score = 170 bits (431), Expect = 3e-42
Identities = 123/436 (28%), Positives = 208/436 (47%), Gaps = 16/436 (3%)
Frame = +1
Query: 250 RSVLVKGCQPFLSAPRECPGHPRVGTGEGACISTKTPRPFSEIPSPGDNGWINLYRF--- 420
R V C P PRE P P + GE +T PG W L
Sbjct: 26 RPVTSTACSP--RRPREVPLCPVMEPGEAQDAATL----------PGPTKWPLLGSLLEI 73
Query: 421 -WKEKGTQKIHYHHVQNFQKYGPIYREKLGNLESVYIIDPEDVALLFKFEGPNPERYNIP 597
WK G +K H V+ +KYG I+R KLG+ +SV++ P + L++ E +P+R I
Sbjct: 74 LWKG-GLKKQHDTLVEYHKKYGKIFRMKLGSFDSVHLGSPCLLEALYRTESAHPQRLEIK 132
Query: 598 PWVAYHQHYQKPVGVLLKKSGAWKKDRLVLNTEVMAPEAIKNFIPLLDTVSQDFVGVLHR 777
PW AY + ++ G+L+ + W++ R ++M P I ++ V DF+G +
Sbjct: 133 PWKAYRDYREEGYGLLILEGEDWQRVRSAFQKKLMKPVEIMKLDDKINEVLADFMGRIDE 192
Query: 778 RIKQQG----------SGKFSAITNVIFGERLGMLEEIVDPEAQKFIDAVYQMFHTSVPM 927
++G F +I V++ +R G+L++ EA FI AV M M
Sbjct: 193 LCDERGRIEDLYTELNKWSFESICLVLYEKRFGLLQKNAGEEALNFIMAVKTMMSMFGKM 252
Query: 928 LNLPPDLFRLFRTKTWRDHVAAWDTIFNKAEKYTQNFYWDLRRKREFNNYPGI--LYRLL 1101
+ P +L R T+ W+ H AWDTIF + N R +++ P + L +
Sbjct: 253 MVTPVELHRSLNTRVWQAHTQAWDTIFRSVKSCVDN------RLEKYSEQPSMDFLCDIY 306
Query: 1102 GNDKLLSEDVKANVTEMLAGGVDTTSMTLQWHLYEMARSLNVQEMLREEVLNARRQAQGD 1281
+++L +++ A VTE+ V+TT+ +L W LY ++R+ +VQ+ L +E+ + + Q
Sbjct: 307 HHNQLSKKELYAAVTELQLAAVETTANSLMWILYNLSRNPHVQQKLFKEIQSVLPENQLP 366
Query: 1282 TSKMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLGSRDYMIPAKTLVQVAVYAMGRDP 1461
++ L+ +P LKA +KE++RL+P R L + +Y +P T++ + + +G
Sbjct: 367 RAEDLRNMPYLKACLKESMRLNPTVPFTTRTLDKAMVLGEYALPKGTVLVLNTHVLGSSE 426
Query: 1462 PFFSKSXSLTXPXGWV 1509
F +S S P W+
Sbjct: 427 ENFEES-SQFRPERWL 441
>ref|XP_591370.3| PREDICTED: cytochrome P450, family 24, subfamily A, polypeptide
1-like isoform 2 [Bos taurus].
Length = 514
Score = 169 bits (429), Expect = 5e-42
Identities = 123/436 (28%), Positives = 208/436 (47%), Gaps = 16/436 (3%)
Frame = +1
Query: 250 RSVLVKGCQPFLSAPRECPGHPRVGTGEGACISTKTPRPFSEIPSPGDNGWINLYRF--- 420
R V C P PRE P P + GE +T PG W L
Sbjct: 26 RPVTSTACSP--RRPREVPLCPVMEPGEAQDAATL----------PGPTKWPLLGSLLEI 73
Query: 421 -WKEKGTQKIHYHHVQNFQKYGPIYREKLGNLESVYIIDPEDVALLFKFEGPNPERYNIP 597
WK G +K H V+ +KYG I+R KLG+ +SV++ P + L++ E +P+R I
Sbjct: 74 LWKG-GLKKQHDTLVEYHKKYGKIFRMKLGSFDSVHLGSPCLLEALYRTESAHPQRLEIK 132
Query: 598 PWVAYHQHYQKPVGVLLKKSGAWKKDRLVLNTEVMAPEAIKNFIPLLDTVSQDFVGVLHR 777
PW AY + ++ G+L+ + W++ R ++M P I ++ V DF+G +
Sbjct: 133 PWKAYRDYREEGYGLLILEGEDWQRVRSAFPKKLMKPVEIMKLDDKINEVLADFMGRIDE 192
Query: 778 RIKQQG----------SGKFSAITNVIFGERLGMLEEIVDPEAQKFIDAVYQMFHTSVPM 927
++G F +I V++ +R G+L++ EA FI AV M M
Sbjct: 193 LCDERGRIEDLYTELNKWSFESICLVLYEKRFGLLQKNAGEEALNFIMAVKTMMSMFGKM 252
Query: 928 LNLPPDLFRLFRTKTWRDHVAAWDTIFNKAEKYTQNFYWDLRRKREFNNYPGI--LYRLL 1101
+ P +L R T+ W+ H AWDTIF + N R +++ P + L +
Sbjct: 253 MVTPVELHRSLNTRVWQAHTQAWDTIFRSVKSCVDN------RLEKYSEQPSMDFLCDIY 306
Query: 1102 GNDKLLSEDVKANVTEMLAGGVDTTSMTLQWHLYEMARSLNVQEMLREEVLNARRQAQGD 1281
+++L +++ A VTE+ V+TT+ +L W LY ++R+ +VQ+ L +E+ + + Q
Sbjct: 307 HHNQLSKKELYAAVTELQLAAVETTANSLMWILYNLSRNPHVQQKLFKEIQSVLPENQLP 366
Query: 1282 TSKMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLGSRDYMIPAKTLVQVAVYAMGRDP 1461
++ L+ +P LKA +KE++RL+P R L + +Y +P T++ + + +G
Sbjct: 367 RAEDLRNMPYLKACLKESMRLNPTVPFTTRTLDKAMVLGEYALPKGTVLVLNTHVLGSSE 426
Query: 1462 PFFSKSXSLTXPXGWV 1509
F +S S P W+
Sbjct: 427 ENFEES-SQFRPERWL 441
>ref|XP_002692553.1| PREDICTED: cytochrome P450, family 24, subfamily A, polypeptide
1-like isoform 2 [Bos taurus].
Length = 448
Score = 164 bits (416), Expect = 1e-40
Identities = 119/420 (28%), Positives = 200/420 (47%), Gaps = 16/420 (3%)
Frame = +1
Query: 250 RSVLVKGCQPFLSAPRECPGHPRVGTGEGACISTKTPRPFSEIPSPGDNGWINLYRF--- 420
R V C P PRE P P + GE +T PG W L
Sbjct: 26 RPVTSTACSP--RRPREVPLCPVMEPGEAQDAATL----------PGPTKWPLLGSLLEI 73
Query: 421 -WKEKGTQKIHYHHVQNFQKYGPIYREKLGNLESVYIIDPEDVALLFKFEGPNPERYNIP 597
WK G +K H V+ +KYG I+R KLG+ +SV++ P + L++ E +P+R I
Sbjct: 74 LWKG-GLKKQHDTLVEYHKKYGKIFRMKLGSFDSVHLGSPCLLEALYRTESAHPQRLEIK 132
Query: 598 PWVAYHQHYQKPVGVLLKKSGAWKKDRLVLNTEVMAPEAIKNFIPLLDTVSQDFVGVLHR 777
PW AY + ++ G+L+ + W++ R ++M P I ++ V DF+G +
Sbjct: 133 PWKAYRDYREEGYGLLILEGEDWQRVRSAFQKKLMKPVEIMKLDDKINEVLADFMGRIDE 192
Query: 778 RIKQQG----------SGKFSAITNVIFGERLGMLEEIVDPEAQKFIDAVYQMFHTSVPM 927
++G F +I V++ +R G+L++ EA FI AV M M
Sbjct: 193 LCDERGRIEDLYTELNKWSFESICLVLYEKRFGLLQKNAGEEALNFIMAVKTMMSMFGKM 252
Query: 928 LNLPPDLFRLFRTKTWRDHVAAWDTIFNKAEKYTQNFYWDLRRKREFNNYPGI--LYRLL 1101
+ P +L R T+ W+ H AWDTIF + N R +++ P + L +
Sbjct: 253 MVTPVELHRSLNTRVWQAHTQAWDTIFRSVKSCVDN------RLEKYSEQPSMDFLCDIY 306
Query: 1102 GNDKLLSEDVKANVTEMLAGGVDTTSMTLQWHLYEMARSLNVQEMLREEVLNARRQAQGD 1281
+++L +++ A VTE+ V+TT+ +L W LY ++R+ +VQ+ L +E+ + + Q
Sbjct: 307 HHNQLSKKELYAAVTELQLAAVETTANSLMWILYNLSRNPHVQQKLFKEIQSVLPENQLP 366
Query: 1282 TSKMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLGSRDYMIPAKTLVQVAVYAMGRDP 1461
++ L+ +P LKA +KE++RL+P R L + +Y +P + + V A +P
Sbjct: 367 RAEDLRNMPYLKACLKESMRLNPTVPFTTRTLDKAMVLGEYALPKGIVRKYDVVATDLEP 426
>ref|NP_001178346.1| 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial [Bos
taurus].
Length = 448
Score = 164 bits (414), Expect = 3e-40
Identities = 119/420 (28%), Positives = 200/420 (47%), Gaps = 16/420 (3%)
Frame = +1
Query: 250 RSVLVKGCQPFLSAPRECPGHPRVGTGEGACISTKTPRPFSEIPSPGDNGWINLYRF--- 420
R V C P PRE P P + GE +T PG W L
Sbjct: 26 RPVTSTACSP--RRPREVPLCPVMEPGEAQDAATL----------PGPTKWPLLGSLLEI 73
Query: 421 -WKEKGTQKIHYHHVQNFQKYGPIYREKLGNLESVYIIDPEDVALLFKFEGPNPERYNIP 597
WK G +K H V+ +KYG I+R KLG+ +SV++ P + L++ E +P+R I
Sbjct: 74 LWKG-GLKKQHDTLVEYHKKYGKIFRMKLGSFDSVHLGSPCLLEALYRTESAHPQRLEIK 132
Query: 598 PWVAYHQHYQKPVGVLLKKSGAWKKDRLVLNTEVMAPEAIKNFIPLLDTVSQDFVGVLHR 777
PW AY + ++ G+L+ + W++ R ++M P I ++ V DF+G +
Sbjct: 133 PWKAYRDYREEGYGLLILEGEDWQRVRSAFPKKLMKPVEIMKLDDKINEVLADFMGRIDE 192
Query: 778 RIKQQG----------SGKFSAITNVIFGERLGMLEEIVDPEAQKFIDAVYQMFHTSVPM 927
++G F +I V++ +R G+L++ EA FI AV M M
Sbjct: 193 LCDERGRIEDLYTELNKWSFESICLVLYEKRFGLLQKNAGEEALNFIMAVKTMMSMFGKM 252
Query: 928 LNLPPDLFRLFRTKTWRDHVAAWDTIFNKAEKYTQNFYWDLRRKREFNNYPGI--LYRLL 1101
+ P +L R T+ W+ H AWDTIF + N R +++ P + L +
Sbjct: 253 MVTPVELHRSLNTRVWQAHTQAWDTIFRSVKSCVDN------RLEKYSEQPSMDFLCDIY 306
Query: 1102 GNDKLLSEDVKANVTEMLAGGVDTTSMTLQWHLYEMARSLNVQEMLREEVLNARRQAQGD 1281
+++L +++ A VTE+ V+TT+ +L W LY ++R+ +VQ+ L +E+ + + Q
Sbjct: 307 HHNQLSKKELYAAVTELQLAAVETTANSLMWILYNLSRNPHVQQKLFKEIQSVLPENQLP 366
Query: 1282 TSKMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLGSRDYMIPAKTLVQVAVYAMGRDP 1461
++ L+ +P LKA +KE++RL+P R L + +Y +P + + V A +P
Sbjct: 367 RAEDLRNMPYLKACLKESMRLNPTVPFTTRTLDKAMVLGEYALPKGIVRKYDVVATDLEP 426
>ref|XP_002685263.1| PREDICTED: FLJ16008 protein-like [Bos taurus].
Length = 537
Score = 154 bits (388), Expect = 3e-37
Identities = 111/399 (27%), Positives = 184/399 (46%), Gaps = 17/399 (4%)
Frame = +1
Query: 364 PFSEIPSPGDNGWINLYRFWKEKGTQKIHYHHVQNFQKYGPIYREKLGNLESVYIIDPED 543
P S PG NL F+ + G +IH ++ ++YG I++ G V + D +
Sbjct: 63 PRSLAAMPGPRTLANLVEFFGKDGFSRIHEIQQKHTREYGKIFKSHFGPQFVVSVADRDL 122
Query: 544 VALLFKFEGPNPERYNIPPWVAYHQHYQKPVGVLLKKSGAWKKDRLVLNTEVMAPEAIKN 723
VA + + EG +P+R N+ W Y + G++ + W K R VL ++ P+ +
Sbjct: 123 VAQVLRAEGASPQRANMGSWQEYRDLRGRSTGLISAEGEQWLKMRSVLRQRILKPKDVAI 182
Query: 724 FIPLLDTVSQDFVGVLHRRIKQQGSG-----------KFS--AITNVIFGERLGMLEEIV 864
F ++ V D + ++ Q G K+S + +++ RLG L +
Sbjct: 183 FAGEINQVIADLIKRIYFLKSQAEDGDTVTNINDLFFKYSMEGVATILYESRLGCLGNSI 242
Query: 865 DPEAQKFIDAVYQMFHTSVPML--NLPPDLFRLFRTKTWRDHVAAWDTIFNKAEKYTQNF 1038
+I+A+ MF T + P RL K W++ +WD +F ++ + N
Sbjct: 243 PQLTADYIEALALMFCTFKTSMYAGAIPRWLRLLIPKPWQEFCRSWDGLFEFSQIHVDNK 302
Query: 1039 YWDLRRKREFNNYP--GILYRLLGNDKLLSEDVKANVTEMLAGGVDTTSMTLQWHLYEMA 1212
D+R + E G+L L + +L E++ AN+TEML GVDTTS TL W +Y +A
Sbjct: 303 LRDIRCQMERGERVRGGLLTYLFLSQELTLEEIYANMTEMLLAGVDTTSFTLSWAVYLLA 362
Query: 1213 RSLNVQEMLREEVLNARRQAQGDTSKMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLG 1392
R VQ+ L E++ + T+ + VPL++A +KETLRL P+ R DL
Sbjct: 363 RHPEVQQALYREIVRNLGERHVPTAADVPKVPLVRALLKETLRLFPVLPGNGRVTQEDLI 422
Query: 1393 SRDYMIPAKTLVQVAVYAMGRDPPFFSKSXSLTXPXGWV 1509
Y+IP T + + YA + F ++ P W+
Sbjct: 423 VGGYLIPRGTQLALCHYATSYEDENFPRAKEF-RPERWL 460
>ref|XP_874669.3| PREDICTED: FLJ16008 protein-like [Bos taurus].
Length = 537
Score = 154 bits (388), Expect = 3e-37
Identities = 111/399 (27%), Positives = 184/399 (46%), Gaps = 17/399 (4%)
Frame = +1
Query: 364 PFSEIPSPGDNGWINLYRFWKEKGTQKIHYHHVQNFQKYGPIYREKLGNLESVYIIDPED 543
P S PG NL F+ + G +IH ++ ++YG I++ G V + D +
Sbjct: 63 PRSLAAMPGPRTLANLVEFFGKDGFSRIHEIQQKHTREYGKIFKSHFGPQFVVSVADRDL 122
Query: 544 VALLFKFEGPNPERYNIPPWVAYHQHYQKPVGVLLKKSGAWKKDRLVLNTEVMAPEAIKN 723
VA + + EG +P+R N+ W Y + G++ + W K R VL ++ P+ +
Sbjct: 123 VAQVLRAEGASPQRANMGSWQEYRDLRGRSTGLISAEGEQWLKMRSVLRQRILKPKDVAI 182
Query: 724 FIPLLDTVSQDFVGVLHRRIKQQGSG-----------KFS--AITNVIFGERLGMLEEIV 864
F ++ V D + ++ Q G K+S + +++ RLG L +
Sbjct: 183 FAGEINQVIADLIKRIYFLKSQAEDGDTVTNINDLFFKYSMEGVATILYESRLGCLGNSI 242
Query: 865 DPEAQKFIDAVYQMFHTSVPML--NLPPDLFRLFRTKTWRDHVAAWDTIFNKAEKYTQNF 1038
+I+A+ MF T + P RL K W++ +WD +F ++ + N
Sbjct: 243 PQLTADYIEALALMFCTFKTSMYAGAIPRWLRLLIPKPWQEFCRSWDGLFEFSQIHVDNK 302
Query: 1039 YWDLRRKREFNNYP--GILYRLLGNDKLLSEDVKANVTEMLAGGVDTTSMTLQWHLYEMA 1212
D+R + E G+L L + +L E++ AN+TEML GVDTTS TL W +Y +A
Sbjct: 303 LRDIRCQMERGERVRGGLLTYLFLSQELTLEEIYANMTEMLLAGVDTTSFTLSWAVYLLA 362
Query: 1213 RSLNVQEMLREEVLNARRQAQGDTSKMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLG 1392
R VQ+ L E++ + T+ + VPL++A +KETLRL P+ R DL
Sbjct: 363 RHPEVQQALYREIVRNLGERHVPTAADVPKVPLVRALLKETLRLFPVLPGNGRVTQEDLI 422
Query: 1393 SRDYMIPAKTLVQVAVYAMGRDPPFFSKSXSLTXPXGWV 1509
Y+IP T + + YA + F ++ P W+
Sbjct: 423 VGGYLIPRGTQLALCHYATSYEDENFPRAKEF-RPERWL 460
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 57,360,149
Number of extensions: 1845983
Number of successful extensions: 6090
Number of sequences better than 1.0e-05: 38
Number of HSP's gapped: 6024
Number of HSP's successfully gapped: 38
Length of query: 505
Length of database: 17,681,374
Length adjustment: 107
Effective length of query: 398
Effective length of database: 14,140,958
Effective search space: 5628101284
Effective search space used: 5628101284
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-006985
(1517 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_535539.2| PREDICTED: similar to Cytochrome P450 11A1, mit... 711 0.0
Alignment gi|XP_539192.2| PREDICTED: similar to Cytochrome P450 11B2, mit... 246 3e-65
Alignment gi|XP_538254.2| PREDICTED: similar to 25-hydroxyvitamin D-1 alp... 177 2e-44
Alignment gi|XP_543059.2| PREDICTED: similar to Cytochrome P450 24A1, mit... 165 1e-40
Alignment gi|XP_540989.2| PREDICTED: similar to cytochrome P450, family 2... 143 5e-34
Alignment gi|XP_853094.1| PREDICTED: similar to Cytochrome P450 27, mitoc... 136 5e-32
Alignment gi|XP_849364.1| PREDICTED: similar to cytochrome P450, family 4... 69 1e-11
Alignment gi|NP_001041490.1| cytochrome P450 4A37 [Canis lupus familiaris]. 62 1e-09
Alignment gi|XP_850626.1| PREDICTED: similar to cytochrome P450, subfamil... 61 3e-09
Alignment gi|NP_001041499.1| cytochrome P450, family 4, subfamily A, poly... 60 6e-09
>ref|XP_535539.2| PREDICTED: similar to Cytochrome P450 11A1, mitochondrial precursor
(CYPXIA1) (P450(scc)) (Cholesterol side-chain cleavage
enzyme) (Cholesterol desmolase) [Canis familiaris].
Length = 520
Score = 711 bits (1836), Expect = 0.0
Identities = 354/443 (79%), Positives = 387/443 (87%), Gaps = 13/443 (2%)
Frame = +1
Query: 226 MLARGLALRSVLVKGCQPFLSAPRECPGHPRVGTGEGACISTKTPRPFSEIPSPGDNGWI 405
MLA+GL LRSVLVKGCQPFLS E PGHPRV TG+GA IST+ PRPFSEIP+PG+NGW+
Sbjct: 1 MLAKGLPLRSVLVKGCQPFLSTVWEGPGHPRVPTGDGASISTQIPRPFSEIPTPGNNGWL 60
Query: 406 NLYRFWKEKGTQKIHYHHVQNFQKYGPIYREKLGNLESVYIIDPEDVALLFKFEGPNPER 585
NLY FW+E G+QKIHYH VQNFQKYGPIYREKLG++ESVYIIDPEDVALLFKFEGP PER
Sbjct: 61 NLYNFWREMGSQKIHYHQVQNFQKYGPIYREKLGSVESVYIIDPEDVALLFKFEGPTPER 120
Query: 586 YNIPPWVAYHQHYQKPVGVLLKKSGAWKKDRLVLNTEVMAPEAIKNFIPLLDTVSQDFVG 765
+ IPPWVAYHQ++Q+PVGVLLKKSGAWKKDRL LN EVMAPEAIKNFIPLLD VSQDFV
Sbjct: 121 FCIPPWVAYHQYHQRPVGVLLKKSGAWKKDRLALNQEVMAPEAIKNFIPLLDPVSQDFVK 180
Query: 766 VLHRRIKQQGSGKFS-------------AITNVIFGERLGMLEEIVDPEAQKFIDAVYQM 906
VLHRRIKQQGSGKFS +ITNV+FGERLGMLEE VDPEAQ+FIDAVYQM
Sbjct: 181 VLHRRIKQQGSGKFSGDISDDLFRFAFESITNVMFGERLGMLEERVDPEAQRFIDAVYQM 240
Query: 907 FHTSVPMLNLPPDLFRLFRTKTWRDHVAAWDTIFNKAEKYTQNFYWDLRRKREFNNYPGI 1086
FHTSVPML PPDLFRLF+TKTWRDHVAAWD IFNKAE YTQNFYW+LR+KR+ +NYPGI
Sbjct: 241 FHTSVPMLTFPPDLFRLFKTKTWRDHVAAWDVIFNKAEIYTQNFYWELRQKRDVDNYPGI 300
Query: 1087 LYRLLGNDKLLSEDVKANVTEMLAGGVDTTSMTLQWHLYEMARSLNVQEMLREEVLNARR 1266
L+RLL ++KLL EDVKAN+TEMLAGGVDTTSMTLQWHLYEMARSL VQE+LREEVL ARR
Sbjct: 301 LHRLLKSNKLLFEDVKANITEMLAGGVDTTSMTLQWHLYEMARSLEVQEVLREEVLAARR 360
Query: 1267 QAQGDTSKMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLGSRDYMIPAKTLVQVAVYA 1446
QAQG+ S MLQLVPLLKASIKETLRLHPISVTLQRYL NDL R+YMIPAKTLVQV+ YA
Sbjct: 361 QAQGNVSTMLQLVPLLKASIKETLRLHPISVTLQRYLENDLVLRNYMIPAKTLVQVSTYA 420
Query: 1447 MGRDPPFFSKSXSLTXPXGWVXK 1515
MG+DP FF + S P W+ K
Sbjct: 421 MGQDPTFF-LNPSKFDPTRWLGK 442
>ref|XP_539192.2| PREDICTED: similar to Cytochrome P450 11B2, mitochondrial precursor
(CYPXIB2) (P-450Aldo) (Aldosterone synthase) (ALDOS)
(Aldosterone-synthesizing enzyme) (Steroid
18-hydroxylase) (P-450C18) [Canis familiaris].
Length = 593
Score = 246 bits (629), Expect = 3e-65
Identities = 134/396 (33%), Positives = 219/396 (55%), Gaps = 13/396 (3%)
Frame = +1
Query: 328 GEGACISTKTPRPFSEIPSPGDNGWINLYRFWKEKGTQKIHYHHVQNFQKYGPIYREKLG 507
G A + + PF +P N W+ + + W+++G++ +H + FQ+ GPI+R +G
Sbjct: 115 GTRAAPAPRAVLPFEAVPRCPGNKWMRVLQIWRQQGSESLHLEMHRTFQELGPIFRYDVG 174
Query: 508 NLESVYIIDPEDVALLFKFEGPNPERYNIPPWVAYHQHYQKPVGVLLKKSGAWKKDRLVL 687
V+++ PEDV L + E P P R + PW+AY QH GV L W+ +RL L
Sbjct: 175 GTHMVHVMLPEDVERLQRVESPQPWRPPLDPWLAYRQHRGHKCGVFLLNGPEWRLNRLKL 234
Query: 688 NTEVMAPEAIKNFIPLLDTVSQDFVGVLHRRIKQQGSGKFS-------------AITNVI 828
N +V++ +A++ +IP++D V++DF L R+ Q G + A + +
Sbjct: 235 NPDVLSLQAVQKYIPMVDGVARDFSQALRARVLQNARGSLTLDIRPSILYYTVEASSLAL 294
Query: 829 FGERLGMLEEIVDPEAQKFIDAVYQMFHTSVPMLNLPPDLFRLFRTKTWRDHVAAWDTIF 1008
FGERLG+L P + F+ A+ M ++ +L LP L R + W++H +WD I
Sbjct: 295 FGERLGLLGPSPSPASLHFLQALEAMLRSTAQLLYLPRGLSRWTSARVWKEHFESWDYIV 354
Query: 1009 NKAEKYTQNFYWDLRRKREFNNYPGILYRLLGNDKLLSEDVKANVTEMLAGGVDTTSMTL 1188
A + Q Y +L R +Y GI+ LL L E V+AN E+ AG VDTT+ L
Sbjct: 355 QYANEAIQRIYQELALGRP-QHYSGIVGELLLRADLSPEAVRANCIELTAGSVDTTAYPL 413
Query: 1189 QWHLYEMARSLNVQEMLREEVLNARRQAQGDTSKMLQLVPLLKASIKETLRLHPISVTLQ 1368
L+E+AR+ +VQ LR+E A+ + + +PLL+A++KETLRL+P+ +++
Sbjct: 414 WMTLFELARNPDVQHALRQESQGAQAGIAENPQTAVTELPLLRAALKETLRLYPVGISVD 473
Query: 1369 RYLVNDLGSRDYMIPAKTLVQVAVYAMGRDPPFFSK 1476
R + +D+ ++Y IPA TLV+V +Y++GR+P F +
Sbjct: 474 RQVGSDVVLQNYHIPAGTLVKVQLYSLGRNPSVFER 509
>ref|XP_538254.2| PREDICTED: similar to 25-hydroxyvitamin D-1 alpha hydroxylase,
mitochondrial precursor (Calcidiol 1-monooxygenase)
(25-OHD-1 alpha-hydroxylase) (25-hydroxyvitamin D(3)
1-alpha-hydroxylase) (VD3 1A hydroxylase) (P450C1 alpha)
(P450VD1-alpha) [Canis familiaris].
Length = 535
Score = 177 bits (449), Expect = 2e-44
Identities = 128/424 (30%), Positives = 202/424 (47%), Gaps = 25/424 (5%)
Frame = +1
Query: 313 PRVGTGEGACISTKTPRPFSEIPSPGDNGWINLYRFWKEKGTQKIHYHHVQNFQKYGPIY 492
P++G+ G+ S PR ++IP P + L + + G ++H VQ ++GP++
Sbjct: 46 PKLGSSLGSRGSDSAPRSLADIPGPSTP--VFLAELFCKGGLSRLHELQVQGVARFGPVW 103
Query: 493 REKLGNLESVYIIDPEDVALLFKFEGPNPERYNIPPWVAYHQHYQKPVGVLLKKSGAWKK 672
G + +VY+ P V L + EGP PER + PW + +H Q+ G+L + ++
Sbjct: 104 LASFGKVRTVYVAAPALVEQLLRQEGPRPERCSFSPWAEHRRHRQRACGLLTAEGEEGQR 163
Query: 673 DRLVLNTEVMAPEAIKNFIPLLDTVSQDFVGVLHRRIKQQ---GSGKFSAITN------- 822
R +L ++ P A + L V +D V RR++QQ G+G + + +
Sbjct: 164 LRSLLAPLLLRPRAAARYAAPLADVVRDLV----RRLRQQRGRGAGPPALVRDVAAEFYK 219
Query: 823 --------VIFGERLGMLEEIVDPEAQKFIDAVYQMFHTSVPMLNLPPDLFRLFRTKTWR 978
V+ G RLG LE V P+ FI AV +F +++ + +P L RL W
Sbjct: 220 FGLEGTAAVLLGSRLGCLEAQVPPDTDAFIRAVGSVFVSTLLTMAMPGWLHRLV-PGPWG 278
Query: 979 DHVAAWDTIFNKAEKYTQNFYWDLRRKREFNNYPGI-----LYRLLGNDKLLSEDVKANV 1143
WD +F A+++ + ++ + E + L L ++L + + NV
Sbjct: 279 RLCRDWDQMFAFAQQHVERREAEVALRSEGKAAEDVGSGAHLTYFLLREELPAPSILGNV 338
Query: 1144 TEMLAGGVDTTSMTLQWHLYEMARSLNVQEMLREEVLNARRQAQG--DTSKMLQLVPLLK 1317
TE+L GVDT S TL W LYE+AR +VQ L E+ A ++ L +PLLK
Sbjct: 339 TELLLAGVDTVSNTLSWALYELARHPDVQTALHSEITAALGPGSSAHPSAAALSQLPLLK 398
Query: 1318 ASIKETLRLHPISVTLQRYLVNDLGSRDYMIPAKTLVQVAVYAMGRDPPFFSKSXSLTXP 1497
A +KE LRL+P+ R D+ DY+IP TLV + YA RDP F + S P
Sbjct: 399 AVVKEVLRLYPVVPGNSRVPDKDIRVGDYIIPKNTLVTLCHYATSRDPAQFPEPNSF-RP 457
Query: 1498 XGWV 1509
W+
Sbjct: 458 ARWL 461
>ref|XP_543059.2| PREDICTED: similar to Cytochrome P450 24A1, mitochondrial precursor
(P450-CC24) (Vitamin D(3) 24-hydroxylase)
(1,25-dihydroxyvitamin D(3) 24-hydroxylase) (24-OHase)
[Canis familiaris].
Length = 514
Score = 165 bits (417), Expect = 1e-40
Identities = 122/432 (28%), Positives = 203/432 (46%), Gaps = 12/432 (2%)
Frame = +1
Query: 250 RSVLVKGCQPFLSAPRECPGHPRVGTGEGACISTKTPRPFSEIPSPGDNGWINLYRFWKE 429
R V C P PRE P P V GE + R + P G L WK
Sbjct: 26 RPVASAACAP--PRPREVPLCPPVEPGEAQ--NAAALRGPTNWPLLGSL----LEILWKG 77
Query: 430 KGTQKIHYHHVQNFQKYGPIYREKLGNLESVYIIDPEDVALLFKFEGPNPERYNIPPWVA 609
G +K H + +KYG I+R KLG+ +SV++ P + L++ E +P+R I PW A
Sbjct: 78 -GLKKQHDTLAEYHKKYGKIFRMKLGSFDSVHLGSPCLLEALYRTESAHPQRLEIKPWKA 136
Query: 610 YHQHYQKPVGVLLKKSGAWKKDRLVLNTEVMAPEAIKNFIPLLDTVSQDFVGVLHRRIKQ 789
Y + ++ G+L+ + W++ R ++M P I ++ V DF+G + +
Sbjct: 137 YRDYREEGYGLLILEGEDWQRVRSAFQKKLMKPVEIMKLDNKINEVLADFMGRIDELCDE 196
Query: 790 QG----------SGKFSAITNVIFGERLGMLEEIVDPEAQKFIDAVYQMFHTSVPMLNLP 939
+G F +I V++ +R G+L + EA FI A+ M T M+ P
Sbjct: 197 RGRIEDLYSELNKWSFESICLVLYEKRFGLLRKNAGDEALNFIMAIKTMMSTFGRMMVTP 256
Query: 940 PDLFRLFRTKTWRDHVAAWDTIFNKAEKYTQNFYWDLRRKREFNNYPG--ILYRLLGNDK 1113
+L + TK W+ H AWDTIF + N R +++ P L + +++
Sbjct: 257 VELHKSLNTKVWQAHTLAWDTIFKSVKSCIDN------RLEKYSEQPSTDFLCDIYHHNQ 310
Query: 1114 LLSEDVKANVTEMLAGGVDTTSMTLQWHLYEMARSLNVQEMLREEVLNARRQAQGDTSKM 1293
L +++ A VTE+ V+TT+ +L W LY ++R+ +VQ+ L +E+ + Q ++
Sbjct: 311 LSKKELYAAVTELQLAAVETTANSLMWILYNLSRNPHVQQKLLKEIQRVLPENQMPRAED 370
Query: 1294 LQLVPLLKASIKETLRLHPISVTLQRYLVNDLGSRDYMIPAKTLVQVAVYAMGRDPPFFS 1473
L+ +P LKA +KE++RL P R L + +Y +P T++ + +G + F
Sbjct: 371 LRNMPYLKACLKESMRLTPSVPFTTRTLDKETVLGEYALPKGTVLMLNTQVLGSNEENF- 429
Query: 1474 KSXSLTXPXGWV 1509
K S P W+
Sbjct: 430 KDSSQFRPERWL 441
>ref|XP_540989.2| PREDICTED: similar to cytochrome P450, family 27, subfamily b,
polypeptide 1 [Canis familiaris].
Length = 490
Score = 143 bits (360), Expect = 5e-34
Identities = 112/416 (26%), Positives = 183/416 (43%), Gaps = 39/416 (9%)
Frame = +1
Query: 385 PGDNGWINLYRFWKEKGTQKIHY---------------------HHVQNFQKYGPIYREK 501
PG NL F+ + G +IH H ++ ++YG I++
Sbjct: 2 PGPRTLANLVEFFWKDGFGRIHEIQDFGSSEAARCSASEGRGRPHSQKHTREYGKIFKSH 61
Query: 502 LGNLESVYIIDPEDVALLFKFEGPNPERYNIPPWVAYHQHYQKPVGVLLKKSGAWKKDRL 681
G V I D + VA + + EG P+R N+ W Y + G++ + W K R
Sbjct: 62 FGPQFVVSIADRDMVAQVLRAEGATPQRANMESWQEYRHLRGRSTGLISAEGEQWLKMRR 121
Query: 682 VLNTEVMAPEAIKNFIPLLDTVSQDFVGVLHRRIKQQGSGK-------------FSAITN 822
VL ++ P + F ++ V D + ++ Q G+ +
Sbjct: 122 VLRQRILKPRDVAIFSGEINQVIADLIKRIYILKSQAEDGETVTNVNELFFKYSMEGVAT 181
Query: 823 VIFGERLGMLEEIVDPEAQKFIDAV---YQMFHTSVPMLNLPPDLFRLFRTKTWRDHVAA 993
+++ RLG LE V +I+A+ + MF TS+ +P L L K W + +
Sbjct: 182 ILYESRLGCLENSVPQPTVDYIEALGLMFSMFKTSMYAGAIPRWLRPLI-PKPWLEFCRS 240
Query: 994 WDTIFNKAEKYTQNFYWDLR--RKREFNNYPGILYRLLGNDKLLSEDVKANVTEMLAGGV 1167
WD +F ++ + N D++ R G+L L + +L E++ AN+TEML GV
Sbjct: 241 WDGLFKFSQIHVDNKLKDIQCHMDRGERVRGGLLTCLFLSQELTLEEIYANMTEMLLAGV 300
Query: 1168 DTTSMTLQWHLYEMARSLNVQEMLREEVLNARRQAQGDTSKMLQLVPLLKASIKETLRLH 1347
DTTS TL W +Y +AR VQ+ L +E++ + T+ + VPL++A +KETLRL
Sbjct: 301 DTTSFTLSWAVYLLARHPQVQQTLYQEIVKNLGERHIPTAADVPKVPLVRALLKETLRLF 360
Query: 1348 PISVTLQRYLVNDLGSRDYMIPAKTLVQVAVYAMGRDPPFFSKSXSLTXPXGWVXK 1515
P+ R DL Y+IP T + + YA + F ++ P W+ K
Sbjct: 361 PVLPGNGRVTQEDLVVGGYLIPKGTQLALCHYATSYEDENFPRAKEF-WPERWLRK 415
>ref|XP_853094.1| PREDICTED: similar to Cytochrome P450 27, mitochondrial precursor
(Cytochrome P-450C27/25) (Sterol 26-hydroxylase) (Sterol
27-hydroxylase) (Vitamin D(3) 25-hydroxylase)
(5-beta-cholestane-3-alpha,7-alpha,12-alpha-triol
27-hydroxylase) [Canis familiaris].
Length = 528
Score = 136 bits (343), Expect = 5e-32
Identities = 114/446 (25%), Positives = 189/446 (42%), Gaps = 20/446 (4%)
Frame = +1
Query: 238 GLALRSVLVKGCQPF-LSAPRECPGHPRVGTGEGACISTKTPRPFSEIPSPGDNGWINLY 414
GL R K P + A E PG+ G GA + R E+P PG + L+
Sbjct: 18 GLCPRGARAKAAIPAAVPATAETPGN-----GPGA----RRLRTLEELPGPGQLRF--LF 66
Query: 415 RFWKEKGTQKIHYHHVQNFQKYGPIYREKLGNLESVYIIDPEDVALLFKFEGPNPERYNI 594
+ + ++H V N KYGP++ G V + + + + EG P R ++
Sbjct: 67 QLLGQGYVLQLHKLQVLNKAKYGPMWVTHAGPQTHVNLASAPLLEQVMRQEGKYPVRNDM 126
Query: 595 PPWVAYHQHYQKPVGVLLKKSGAWKKDRLVLNTEVMAPEAIKNFIPLLDTVSQDFVGVLH 774
W + G + W + R LN ++ P + L+ V DF+ L
Sbjct: 127 ELWKEHRDQQGLAYGPFTTEGHHWYQLRHALNQRMLKPSEAALYTDALNEVVDDFMAHLS 186
Query: 775 RRIKQQGSGK-------------FSAITNVIFGERLGMLEEIVDPEAQKFIDAVYQMFHT 915
+ + + SG AI ++F +R+G LE + + F+ +V MF
Sbjct: 187 QLLAESPSGNQVSDMAHQFYYFALEAICYILFEKRIGCLERPIPQDTVAFVRSVGLMFQN 246
Query: 916 SVPMLNLPPDLFRLFRTKTWRDHVAAWDTIFNKAEKYTQNFYWDLRRKREFNN-----YP 1080
SV + LP L W+ ++ W+TIF+ +K ++ + +
Sbjct: 247 SVYVTFLPKWTRPLL--PFWKRYLDGWNTIFSFGKKLIDQKLKEIETQLQTKGPDEVEIS 304
Query: 1081 GILYRLLGNDKLLSEDVKANVTEMLAGGVDTTSMTLQWHLYEMARSLNVQEMLREEVLNA 1260
G L+ LL +L + + ++ E+L GVDTTS T+ W LY ++++ +Q L +EV+
Sbjct: 305 GYLHFLLTRGQLSTREAMGSLPELLLAGVDTTSNTMTWALYHLSKNPEIQAALHKEVVGV 364
Query: 1261 RRQAQGDTSKMLQLVPLLKASIKETLRLHPISVTLQRYLV-NDLGSRDYMIPAKTLVQVA 1437
Q K +PLLKA +KETLRL+P+ R + ++ ++ P T
Sbjct: 365 VPPGQVPQQKDFAHMPLLKAVLKETLRLYPVVPINSRVITEKEIEVNGFLFPKNTQFVFC 424
Query: 1438 VYAMGRDPPFFSKSXSLTXPXGWVXK 1515
Y + RDP F + S P W+ K
Sbjct: 425 HYVVSRDPDIFPEPESF-QPYRWLRK 449
>ref|XP_849364.1| PREDICTED: similar to cytochrome P450, family 4, subfamily v,
polypeptide 2 [Canis familiaris].
Length = 575
Score = 68.9 bits (167), Expect = 1e-11
Identities = 81/357 (22%), Positives = 144/357 (40%), Gaps = 28/357 (7%)
Frame = +1
Query: 484 PIYREKLGNLESVYIIDPEDVALLFKFEGPNPERYN---IPPWVAYHQHYQKPVGVLLKK 654
P+ + LG + V I E+V ++ + Y + PW+ +G+L
Sbjct: 138 PLLKLWLGPIPIVAIYSAENVEVILTSSRQIDKSYVYKFLEPWLG--------LGLLTST 189
Query: 655 SGAWKKDRLVLNTEVMAPEAIKNFIPLLDTVSQDFVGVLHRRIKQQGSGKFSAIT----N 822
W+ R +L T +++F+ +++ + V L + + Q+ F IT +
Sbjct: 190 GNKWRSRRKML-TPTFHFTILEDFLDVMNEHANILVNKLEKHVNQEAFNCFFYITLCALD 248
Query: 823 VIFGERLGMLEEIVDPEAQKFIDAVYQMFHTSVPMLNLP----PDLFRLFRTKTWRDHVA 990
+I +G + E +++ A+Y+M T + +P LF +F K R+H
Sbjct: 249 IICETAMGKNIGAQNNEDSEYVRAIYRMSDTIHRRMKMPWLWLDFLFLMF--KEGREHKR 306
Query: 991 AWDTIFNKAEKYTQNFYWDLRRKREF-----------NNYPGILYRLLG-----NDKLLS 1122
+ + N +L+R E N L LL +KL
Sbjct: 307 NLEILHNFTNNVITERASELKRDEEHGSADKDCSPSKNKRRAFLDLLLNVTDDEGNKLRH 366
Query: 1123 EDVKANVTEMLAGGVDTTSMTLQWHLYEMARSLNVQEMLREEVLNA-RRQAQGDTSKMLQ 1299
EDV+ V + G DTT+ + W LY + VQ+ + E+ + + + T + L+
Sbjct: 367 EDVREEVDTFMFEGHDTTAAAINWSLYLLGSYPEVQKQVDSELEDVFGKSDRPATLEDLK 426
Query: 1300 LVPLLKASIKETLRLHPISVTLQRYLVNDLGSRDYMIPAKTLVQVAVYAMGRDPPFF 1470
+ L+ IKE+LRL P R L D Y + + + YA+ RDP +F
Sbjct: 427 KLKYLECVIKESLRLFPSVPLFARNLNEDCVVAGYKVVKGSQAIIIPYALHRDPRYF 483
>ref|NP_001041490.1| cytochrome P450 4A37 [Canis lupus familiaris].
Length = 510
Score = 62.0 bits (149), Expect = 1e-09
Identities = 84/360 (23%), Positives = 147/360 (40%), Gaps = 26/360 (7%)
Frame = +1
Query: 460 VQNFQKYGPIY-----REKLGNLESVYIIDPEDVALLFKFEGPNPE-RYN-IPPWVAYHQ 618
+Q FQK+ Y R G+ S+ + DP+ + ++ P Y I PW+ Y
Sbjct: 72 LQVFQKWTEKYPCASPRWLWGSRVSLVVYDPDYMKMILGRSDPKAGGSYTFITPWIGY-- 129
Query: 619 HYQKPVGVLLKKSGAWKKDRLVLNTEVMAPEAIKNFIPLLDTVSQDFVGVLHRRIKQQGS 798
G+LL AW + R +L T + +K ++ L+ Q + + Q
Sbjct: 130 ------GLLLLHGEAWFQHRRML-TPAFHYDILKPYVRLMADSVQVMLDKWEELLTQNSH 182
Query: 799 GKFSAITNVIFGERLGML------EEIVDPEAQKFIDAVYQMFH---TSVPMLNLPPDLF 951
+ +++ + + D +Q +I A+ M + V + D+F
Sbjct: 183 LEIFEHVSLMTLDTIMKCAFSYQGNHQADRNSQAYIQAIRDMNNLVFARVRNVFYQKDIF 242
Query: 952 RLFRTKTWRDHVAAW------DTIFN--KAEKYTQNFYWDLRRKREFNNYPGILYRLLGN 1107
++ R+H A D + KA+ + +R KR + +L+ + N
Sbjct: 243 YGLTSEGRRNHKARQIAHQHTDRVIKLRKAQLQDEGELEKVRNKRHLDFLDILLFAKMEN 302
Query: 1108 DKLLSE-DVKANVTEMLAGGVDTTSMTLQWHLYEMARSLNVQEMLREEVLNARRQAQGDT 1284
K LS+ D++A V + G DTT+ + W LY +A Q+ REE+ + T
Sbjct: 303 GKGLSDKDLRAEVDTFMFEGHDTTASGISWILYALATHPEHQQRCREEIQSLLGDGASIT 362
Query: 1285 SKMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLGSRD-YMIPAKTLVQVAVYAMGRDP 1461
+ L +P IKE LRL+P + R L + D +P LV ++ YA+ +P
Sbjct: 363 WEHLDQMPYTTMCIKEALRLYPPVPGVGRELSKPITFTDGRSLPKGFLVSLSFYALHHNP 422
>ref|XP_850626.1| PREDICTED: similar to cytochrome P450, subfamily XIB polypeptide 2
precursor, partial [Canis familiaris].
Length = 478
Score = 60.8 bits (146), Expect = 3e-09
Identities = 31/112 (27%), Positives = 57/112 (50%)
Frame = +1
Query: 328 GEGACISTKTPRPFSEIPSPGDNGWINLYRFWKEKGTQKIHYHHVQNFQKYGPIYREKLG 507
G A + + PF +P N W+ + + W+++G++ +H + FQ+ GPI+R +G
Sbjct: 117 GTRAAPAPRAVLPFEAVPRCPGNKWMRVLQIWRQQGSESLHLEMHRTFQELGPIFRYDVG 176
Query: 508 NLESVYIIDPEDVALLFKFEGPNPERYNIPPWVAYHQHYQKPVGVLLKKSGA 663
V+++ PE + L + E P P+ PW + P+G+LL G+
Sbjct: 177 GTHMVHVMLPEGMERLQRGESPQPD---TSPW-----GFGCPLGLLLALRGS 220
>ref|NP_001041499.1| cytochrome P450, family 4, subfamily A, polypeptide 11 [Canis lupus
familiaris].
Length = 510
Score = 60.1 bits (144), Expect = 6e-09
Identities = 75/340 (22%), Positives = 137/340 (40%), Gaps = 21/340 (6%)
Frame = +1
Query: 505 GNLESVYIIDPEDVALLFKFEGPNPE-RYNI-PPWVAYHQHYQKPVGVLLKKSGAWKKDR 678
G + I DP+ + L+ P P+ Y + PW+ Y G+LL W + R
Sbjct: 92 GTEAEIMIYDPDYMKLILGRSDPKPDGSYKLMAPWIGY--------GLLLLNGETWSQHR 143
Query: 679 LVLNTEVMAPEAIKNFIPLLDTVSQDFVGVLHRRIKQQGSGKFSAITNVIFGERLGML-- 852
+L T + +K ++ L+ Q + + Q + +++ + +
Sbjct: 144 RML-TPAFHYDILKPYVRLMADSVQVMLDKWEELLSQNSHLEIFDHVSLMTLDTIMKCAF 202
Query: 853 ----EEIVDPEAQKFIDAVYQMFHTSVPMLN---LPPDLFRLFRTKTWRDHVAAW----- 996
D +Q +I A+ + + + D+F ++ R+H A
Sbjct: 203 SYQGNHQADRNSQAYIQAIRDLNNLVFARMRNVFYQKDIFYGLTSEGRRNHKACQLAHQH 262
Query: 997 -DTIFN--KAEKYTQNFYWDLRRKREFNNYPGILYRLLGNDKLLSE-DVKANVTEMLAGG 1164
D + KA+ + +R KR + +L+ + N + LS+ D++A V + G
Sbjct: 263 TDRVIKLRKAQLQDKGELEKVRNKRHLDFLDILLFAKVENGRGLSDKDLRAEVDTFMFEG 322
Query: 1165 VDTTSMTLQWHLYEMARSLNVQEMLREEVLNARRQAQGDTSKMLQLVPLLKASIKETLRL 1344
DTT+ + W LY +A Q+ REE+ + T + L +P IKE LRL
Sbjct: 323 HDTTASGISWILYALATHPEHQQRCREEIQSLLGDGASITWEHLDQMPYTTMCIKEALRL 382
Query: 1345 HPISVTLQRYLVNDLGSRD-YMIPAKTLVQVAVYAMGRDP 1461
+P + R L + D +P LV ++ YA+ +P
Sbjct: 383 YPPVPGVGRELSKPITFPDGRSLPKGFLVLLSFYALHHNP 422
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 59,001,968
Number of extensions: 1751522
Number of successful extensions: 5884
Number of sequences better than 1.0e-05: 24
Number of HSP's gapped: 5851
Number of HSP's successfully gapped: 24
Length of query: 505
Length of database: 18,874,504
Length adjustment: 107
Effective length of query: 398
Effective length of database: 15,307,552
Effective search space: 6092405696
Effective search space used: 6092405696
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-006985
(1517 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_000772.2| cholesterol side-chain cleavage enzyme, mitocho... 682 0.0
Alignment gi|NP_001093243.1| cholesterol side-chain cleavage enzyme, mito... 414 e-115
Alignment gi|NP_000488.3| cytochrome P450 11B1, mitochondrial isoform 1 p... 258 1e-68
Alignment gi|NP_000489.3| cytochrome P450 11B2, mitochondrial precursor [... 258 1e-68
Alignment gi|NP_001021384.1| cytochrome P450 11B1, mitochondrial isoform ... 241 2e-63
Alignment gi|NP_000776.1| 25-hydroxyvitamin D-1 alpha hydroxylase, mitoch... 169 8e-42
Alignment gi|NP_000773.2| 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mito... 167 3e-41
Alignment gi|NP_001122387.1| 1,25-dihydroxyvitamin D(3) 24-hydroxylase, m... 162 6e-40
Alignment gi|NP_000775.1| sterol 26-hydroxylase, mitochondrial precursor ... 137 3e-32
Alignment gi|NP_001001665.3| cytochrome P450 27C1 [Homo sapiens]. 109 6e-24
>ref|NP_000772.2| cholesterol side-chain cleavage enzyme, mitochondrial isoform a
precursor [Homo sapiens].
Length = 521
Score = 682 bits (1760), Expect = 0.0
Identities = 337/444 (75%), Positives = 378/444 (85%), Gaps = 14/444 (3%)
Frame = +1
Query: 226 MLARGLALRSVLVKGCQPFLSAPRECPGHPRVGTGEGACISTKTPRPFSEIPSPGDNGWI 405
MLA+GL RSVLVKGCQ FLSAPRE G RV TGEGA IST++PRPF+EIPSPGDNGW+
Sbjct: 1 MLAKGLPPRSVLVKGCQTFLSAPREGLGRLRVPTGEGAGISTRSPRPFNEIPSPGDNGWL 60
Query: 406 NLYRFWKEKGTQKIHYHHVQNFQKYGPIYREKLGNLESVYIIDPEDVALLFKFEGPNPER 585
NLY FW+E GT K+H HHVQNFQKYGPIYREKLGN+ESVY+IDPEDVALLFK EGPNPER
Sbjct: 61 NLYHFWRETGTHKVHLHHVQNFQKYGPIYREKLGNVESVYVIDPEDVALLFKSEGPNPER 120
Query: 586 YNIPPWVAYHQHYQKPVGVLLKKSGAWKKDRLVLNTEVMAPEAIKNFIPLLDTVSQDFVG 765
+ IPPWVAYHQ+YQ+P+GVLLKKS AWKKDR+ LN EVMAPEA KNF+PLLD VS+DFV
Sbjct: 121 FLIPPWVAYHQYYQRPIGVLLKKSAAWKKDRVALNQEVMAPEATKNFLPLLDAVSRDFVS 180
Query: 766 VLHRRIKQQGSGKFS-------------AITNVIFGERLGMLEEIVDPEAQKFIDAVYQM 906
VLHRRIK+ GSG +S +ITNVIFGER GMLEE+V+PEAQ+FIDA+YQM
Sbjct: 181 VLHRRIKKAGSGNYSGDISDDLFRFAFESITNVIFGERQGMLEEVVNPEAQRFIDAIYQM 240
Query: 907 FHTSVPMLNLPPDLFRLFRTKTWRDHVAAWDTIFNKAEKYTQNFYWDLRRKRE-FNNYPG 1083
FHTSVPMLNLPPDLFRLFRTKTW+DHVAAWD IF+KA+ YTQNFYW+LR+K ++Y G
Sbjct: 241 FHTSVPMLNLPPDLFRLFRTKTWKDHVAAWDVIFSKADIYTQNFYWELRQKGSVHHDYRG 300
Query: 1084 ILYRLLGNDKLLSEDVKANVTEMLAGGVDTTSMTLQWHLYEMARSLNVQEMLREEVLNAR 1263
ILYRLLG+ K+ ED+KANVTEMLAGGVDTTSMTLQWHLYEMAR+L VQ+MLR EVL AR
Sbjct: 301 ILYRLLGDSKMSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEVLAAR 360
Query: 1264 RQAQGDTSKMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLGSRDYMIPAKTLVQVAVY 1443
QAQGD + MLQLVPLLKASIKETLRLHPISVTLQRYLVNDL RDYMIPAKTLVQVA+Y
Sbjct: 361 HQAQGDMATMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQVAIY 420
Query: 1444 AMGRDPPFFSKSXSLTXPXGWVXK 1515
A+GR+P FF + P W+ K
Sbjct: 421 ALGREPTFFFDPENF-DPTRWLSK 443
>ref|NP_001093243.1| cholesterol side-chain cleavage enzyme, mitochondrial isoform b [Homo
sapiens].
Length = 363
Score = 414 bits (1063), Expect = e-115
Identities = 211/286 (73%), Positives = 238/286 (83%), Gaps = 14/286 (4%)
Frame = +1
Query: 700 MAPEAIKNFIPLLDTVSQDFVGVLHRRIKQQGSGKFS-------------AITNVIFGER 840
MAPEA KNF+PLLD VS+DFV VLHRRIK+ GSG +S +ITNVIFGER
Sbjct: 1 MAPEATKNFLPLLDAVSRDFVSVLHRRIKKAGSGNYSGDISDDLFRFAFESITNVIFGER 60
Query: 841 LGMLEEIVDPEAQKFIDAVYQMFHTSVPMLNLPPDLFRLFRTKTWRDHVAAWDTIFNKAE 1020
GMLEE+V+PEAQ+FIDA+YQMFHTSVPMLNLPPDLFRLFRTKTW+DHVAAWD IF+KA+
Sbjct: 61 QGMLEEVVNPEAQRFIDAIYQMFHTSVPMLNLPPDLFRLFRTKTWKDHVAAWDVIFSKAD 120
Query: 1021 KYTQNFYWDLRRKREFNN-YPGILYRLLGNDKLLSEDVKANVTEMLAGGVDTTSMTLQWH 1197
YTQNFYW+LR+K ++ Y GILYRLLG+ K+ ED+KANVTEMLAGGVDTTSMTLQWH
Sbjct: 121 IYTQNFYWELRQKGSVHHDYRGILYRLLGDSKMSFEDIKANVTEMLAGGVDTTSMTLQWH 180
Query: 1198 LYEMARSLNVQEMLREEVLNARRQAQGDTSKMLQLVPLLKASIKETLRLHPISVTLQRYL 1377
LYEMAR+L VQ+MLR EVL AR QAQGD + MLQLVPLLKASIKETLRLHPISVTLQRYL
Sbjct: 181 LYEMARNLKVQDMLRAEVLAARHQAQGDMATMLQLVPLLKASIKETLRLHPISVTLQRYL 240
Query: 1378 VNDLGSRDYMIPAKTLVQVAVYAMGRDPPFFSKSXSLTXPXGWVXK 1515
VNDL RDYMIPAKTLVQVA+YA+GR+P FF + P W+ K
Sbjct: 241 VNDLVLRDYMIPAKTLVQVAIYALGREPTFFFDPENF-DPTRWLSK 285
>ref|NP_000488.3| cytochrome P450 11B1, mitochondrial isoform 1 precursor [Homo
sapiens].
Length = 503
Score = 258 bits (659), Expect = 1e-68
Identities = 143/396 (36%), Positives = 217/396 (54%), Gaps = 13/396 (3%)
Frame = +1
Query: 328 GEGACISTKTPRPFSEIPSPGDNGWINLYRFWKEKGTQKIHYHHVQNFQKYGPIYREKLG 507
G A +T PF +P N W+ L + W+E+G + +H Q FQ+ GPI+R LG
Sbjct: 25 GTRAARVPRTVLPFEAMPRRPGNRWLRLLQIWREQGYEDLHLEVHQTFQELGPIFRYDLG 84
Query: 508 NLESVYIIDPEDVALLFKFEGPNPERYNIPPWVAYHQHYQKPVGVLLKKSGAWKKDRLVL 687
V ++ PEDV L + + +P R ++ PWVAY QH GV L W+ +RL L
Sbjct: 85 GAGMVCVMLPEDVEKLQQVDSLHPHRMSLEPWVAYRQHRGHKCGVFLLNGPEWRFNRLRL 144
Query: 688 NTEVMAPEAIKNFIPLLDTVSQDFVGVLHRRIKQQGSGKFS-------------AITNVI 828
N EV++P A++ F+P++D V++DF L +++ Q G + A +
Sbjct: 145 NPEVLSPNAVQRFLPMVDAVARDFSQALKKKVLQNARGSLTLDVQPSIFHYTIEASNLAL 204
Query: 829 FGERLGMLEEIVDPEAQKFIDAVYQMFHTSVPMLNLPPDLFRLFRTKTWRDHVAAWDTIF 1008
FGERLG++ + F+ A+ MF ++V ++ +P L R K W++H AWD IF
Sbjct: 205 FGERLGLVGHSPSSASLNFLHALEVMFKSTVQLMFMPRSLSRWTSPKVWKEHFEAWDCIF 264
Query: 1009 NKAEKYTQNFYWDLRRKREFNNYPGILYRLLGNDKLLSEDVKANVTEMLAGGVDTTSMTL 1188
+ Q Y +L R Y I+ LL N +L + +KAN E+ AG VDTT L
Sbjct: 265 QYGDNCIQKIYQELAFSRP-QQYTSIVAELLLNAELSPDAIKANSMELTAGSVDTTVFPL 323
Query: 1189 QWHLYEMARSLNVQEMLREEVLNARRQAQGDTSKMLQLVPLLKASIKETLRLHPISVTLQ 1368
L+E+AR+ NVQ+ LR+E L A K +PLL+A++KETLRL+P+ + L+
Sbjct: 324 LMTLFELARNPNVQQALRQESLAAAASISEHPQKATTELPLLRAALKETLRLYPVGLFLE 383
Query: 1369 RYLVNDLGSRDYMIPAKTLVQVAVYAMGRDPPFFSK 1476
R +DL ++Y IPA TLV+V +Y++GR+P F +
Sbjct: 384 RVASSDLVLQNYHIPAGTLVRVFLYSLGRNPALFPR 419
>ref|NP_000489.3| cytochrome P450 11B2, mitochondrial precursor [Homo sapiens].
Length = 503
Score = 258 bits (658), Expect = 1e-68
Identities = 142/396 (35%), Positives = 221/396 (55%), Gaps = 13/396 (3%)
Frame = +1
Query: 328 GEGACISTKTPRPFSEIPSPGDNGWINLYRFWKEKGTQKIHYHHVQNFQKYGPIYREKLG 507
G A + +T PF +P N W+ L + W+E+G + +H Q FQ+ GPI+R LG
Sbjct: 25 GTRAARAPRTVLPFEAMPQHPGNRWLRLLQIWREQGYEHLHLEMHQTFQELGPIFRYNLG 84
Query: 508 NLESVYIIDPEDVALLFKFEGPNPERYNIPPWVAYHQHYQKPVGVLLKKSGAWKKDRLVL 687
V ++ PEDV L + + +P R + PWVAY QH GV L W+ +RL L
Sbjct: 85 GPRMVCVMLPEDVEKLQQVDSLHPCRMILEPWVAYRQHRGHKCGVFLLNGPEWRFNRLRL 144
Query: 688 NTEVMAPEAIKNFIPLLDTVSQDFVGVLHRRIKQQGSGKFS-------------AITNVI 828
N +V++P+A++ F+P++D V++DF L +++ Q G + A +
Sbjct: 145 NPDVLSPKAVQRFLPMVDAVARDFSQALKKKVLQNARGSLTLDVQPSIFHYTIEASNLAL 204
Query: 829 FGERLGMLEEIVDPEAQKFIDAVYQMFHTSVPMLNLPPDLFRLFRTKTWRDHVAAWDTIF 1008
FGERLG++ + F+ A+ MF ++V ++ +P L R K W++H AWD IF
Sbjct: 205 FGERLGLVGHSPSSASLNFLHALEVMFKSTVQLMFMPRSLSRWISPKVWKEHFEAWDCIF 264
Query: 1009 NKAEKYTQNFYWDLRRKREFNNYPGILYRLLGNDKLLSEDVKANVTEMLAGGVDTTSMTL 1188
+ Q Y +L R +Y GI+ LL +L E +KAN E+ AG VDTT+ L
Sbjct: 265 QYGDNCIQKIYQELAFNRP-QHYTGIVAELLLKAELSLEAIKANSMELTAGSVDTTAFPL 323
Query: 1189 QWHLYEMARSLNVQEMLREEVLNARRQAQGDTSKMLQLVPLLKASIKETLRLHPISVTLQ 1368
L+E+AR+ +VQ++LR+E L A K +PLL+A++KETLRL+P+ + L+
Sbjct: 324 LMTLFELARNPDVQQILRQESLAAAASISEHPQKATTELPLLRAALKETLRLYPVGLFLE 383
Query: 1369 RYLVNDLGSRDYMIPAKTLVQVAVYAMGRDPPFFSK 1476
R + +DL ++Y IPA TLVQV +Y++GR+ F +
Sbjct: 384 RVVSSDLVLQNYHIPAGTLVQVFLYSLGRNAALFPR 419
>ref|NP_001021384.1| cytochrome P450 11B1, mitochondrial isoform 2 precursor [Homo
sapiens].
Length = 437
Score = 241 bits (614), Expect = 2e-63
Identities = 136/390 (34%), Positives = 208/390 (53%), Gaps = 13/390 (3%)
Frame = +1
Query: 328 GEGACISTKTPRPFSEIPSPGDNGWINLYRFWKEKGTQKIHYHHVQNFQKYGPIYREKLG 507
G A +T PF +P N W+ L + W+E+G + +H Q FQ+ GPI+R LG
Sbjct: 25 GTRAARVPRTVLPFEAMPRRPGNRWLRLLQIWREQGYEDLHLEVHQTFQELGPIFRYDLG 84
Query: 508 NLESVYIIDPEDVALLFKFEGPNPERYNIPPWVAYHQHYQKPVGVLLKKSGAWKKDRLVL 687
V ++ PEDV L + + +P R ++ PWVAY QH GV L W+ +RL L
Sbjct: 85 GAGMVCVMLPEDVEKLQQVDSLHPHRMSLEPWVAYRQHRGHKCGVFLLNGPEWRFNRLRL 144
Query: 688 NTEVMAPEAIKNFIPLLDTVSQDFVGVLHRRIKQQGSGKFS-------------AITNVI 828
N EV++P A++ F+P++D V++DF L +++ Q G + A +
Sbjct: 145 NPEVLSPNAVQRFLPMVDAVARDFSQALKKKVLQNARGSLTLDVQPSIFHYTIEASNLAL 204
Query: 829 FGERLGMLEEIVDPEAQKFIDAVYQMFHTSVPMLNLPPDLFRLFRTKTWRDHVAAWDTIF 1008
FGERLG++ + F+ A+ MF ++V ++ +P L R K W++H AWD IF
Sbjct: 205 FGERLGLVGHSPSSASLNFLHALEVMFKSTVQLMFMPRSLSRWTSPKVWKEHFEAWDCIF 264
Query: 1009 NKAEKYTQNFYWDLRRKREFNNYPGILYRLLGNDKLLSEDVKANVTEMLAGGVDTTSMTL 1188
+ Q Y +L R Y I+ LL N +L + +KAN E+ AG VDTT L
Sbjct: 265 QYGDNCIQKIYQELAFSRP-QQYTSIVAELLLNAELSPDAIKANSMELTAGSVDTTVFPL 323
Query: 1189 QWHLYEMARSLNVQEMLREEVLNARRQAQGDTSKMLQLVPLLKASIKETLRLHPISVTLQ 1368
L+E+AR+ NVQ+ LR+E L A K +PLL+A++KETLRL+P+ + L+
Sbjct: 324 LMTLFELARNPNVQQALRQESLAAAASISEHPQKATTELPLLRAALKETLRLYPVGLFLE 383
Query: 1369 RYLVNDLGSRDYMIPAKTLVQVAVYAMGRD 1458
R +DL ++Y IPA L + V + ++
Sbjct: 384 RVASSDLVLQNYHIPAGVLKHLQVETLTQE 413
>ref|NP_000776.1| 25-hydroxyvitamin D-1 alpha hydroxylase, mitochondrial [Homo
sapiens].
Length = 508
Score = 169 bits (427), Expect = 8e-42
Identities = 129/427 (30%), Positives = 197/427 (46%), Gaps = 28/427 (6%)
Frame = +1
Query: 313 PRVGTGEGACISTKTPRPFSEIPSPGDNGWINLYRFWKEKGTQKIHYHHVQNFQKYGPIY 492
P +G G R ++IP P + L + + G ++H VQ +GP++
Sbjct: 19 PELGASLGYREYHSARRSLADIPGPSTPSF--LAELFCKGGLSRLHELQVQGAAHFGPVW 76
Query: 493 REKLGNLESVYIIDPEDVALLFKFEGPNPERYNIPPWVAYHQHYQKPVGVLLKKSGAWKK 672
G + +VY+ P V L + EGP PER + PW + + Q+ G+L + W++
Sbjct: 77 LASFGTVRTVYVAAPALVEELLRQEGPRPERCSFSPWTEHRRCRQRACGLLTAEGEEWQR 136
Query: 673 DRLVLNTEVMAPEAIKNFIPLLDTVSQDFVGVLHRRIKQQGSG-------------KF-- 807
R +L ++ P+A + L+ V D V L RR + +G+G KF
Sbjct: 137 LRSLLAPLLLRPQAAARYAGTLNNVVCDLVRRL-RRQRGRGTGPPALVRDVAGEFYKFGL 195
Query: 808 SAITNVIFGERLGMLEEIVDPEAQKFIDAVYQMFHTSVPMLNLPPDLFRLFRTKTWRDHV 987
I V+ G RLG LE V P+ + FI AV +F +++ + +P L L W
Sbjct: 196 EGIAAVLLGSRLGCLEAQVPPDTETFIRAVGSVFVSTLLTMAMPHWLRHLV-PGPWGRLC 254
Query: 988 AAWDTIFNKAEKYTQNFYWDLRRKREFNNYPG-----------ILYRLLGNDKLLSEDVK 1134
WD +F A+++ + RR+ E G L L ++L ++ +
Sbjct: 255 RDWDQMFAFAQRHVE------RREAEAAMRNGGQPEKDLESGAHLTHFLFREELPAQSIL 308
Query: 1135 ANVTEMLAGGVDTTSMTLQWHLYEMARSLNVQEMLREEVLNARRQAQG--DTSKMLQLVP 1308
NVTE+L GVDT S TL W LYE++R VQ L E+ A ++ +L +P
Sbjct: 309 GNVTELLLAGVDTVSNTLSWALYELSRHPEVQTALHSEITAALSPGSSAYPSATVLSQLP 368
Query: 1309 LLKASIKETLRLHPISVTLQRYLVNDLGSRDYMIPAKTLVQVAVYAMGRDPPFFSKSXSL 1488
LLKA +KE LRL+P+ R D+ DY+IP TLV + YA RDP F + S
Sbjct: 369 LLKAVVKEVLRLYPVVPGNSRVPDKDIHVGDYIIPKNTLVTLCHYATSRDPAQFPEPNSF 428
Query: 1489 TXPXGWV 1509
P W+
Sbjct: 429 -RPARWL 434
>ref|NP_000773.2| 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial isoform 1
precursor [Homo sapiens].
Length = 514
Score = 167 bits (422), Expect = 3e-41
Identities = 117/421 (27%), Positives = 197/421 (46%), Gaps = 15/421 (3%)
Frame = +1
Query: 292 PRECPGHPRVGTGEGACISTKTPRPFSEIPSPGDNGWI---NLYRFWKEKGTQKIHYHHV 462
PRE P P GE + PG W +L + + G +K H V
Sbjct: 38 PREVPVCPLTAGGETQ----------NAAALPGPTSWPLLGSLLQILWKGGLKKQHDTLV 87
Query: 463 QNFQKYGPIYREKLGNLESVYIIDPEDVALLFKFEGPNPERYNIPPWVAYHQHYQKPVGV 642
+ +KYG I+R KLG+ ESV++ P + L++ E P+R I PW AY + ++ G+
Sbjct: 88 EYHKKYGKIFRMKLGSFESVHLGSPCLLEALYRTESAYPQRLEIKPWKAYRDYRKEGYGL 147
Query: 643 LLKKSGAWKKDRLVLNTEVMAPEAIKNFIPLLDTVSQDFVGVLHRRIKQQG--------- 795
L+ + W++ R ++M P + ++ V DF+G + ++G
Sbjct: 148 LILEGEDWQRVRSAFQKKLMKPGEVMKLDNKINEVLADFMGRIDELCDERGHVEDLYSEL 207
Query: 796 -SGKFSAITNVIFGERLGMLEEIVDPEAQKFIDAVYQMFHTSVPMLNLPPDLFRLFRTKT 972
F +I V++ +R G+L++ EA FI A+ M T M+ P +L + TK
Sbjct: 208 NKWSFESICLVLYEKRFGLLQKNAGDEAVNFIMAIKTMMSTFGRMMVTPVELHKSLNTKV 267
Query: 973 WRDHVAAWDTIFNKAEKYTQNFYWDLRRKREFNNYPG--ILYRLLGNDKLLSEDVKANVT 1146
W+DH AWDTIF + N R +++ P L + ++L +++ A VT
Sbjct: 268 WQDHTLAWDTIFKSVKACIDN------RLEKYSQQPSADFLCDIYHQNRLSKKELYAAVT 321
Query: 1147 EMLAGGVDTTSMTLQWHLYEMARSLNVQEMLREEVLNARRQAQGDTSKMLQLVPLLKASI 1326
E+ V+TT+ +L W LY ++R+ VQ+ L +E+ + + Q ++ L+ +P LKA +
Sbjct: 322 ELQLAAVETTANSLMWILYNLSRNPQVQQKLLKEIQSVLPENQVPRAEDLRNMPYLKACL 381
Query: 1327 KETLRLHPISVTLQRYLVNDLGSRDYMIPAKTLVQVAVYAMGRDPPFFSKSXSLTXPXGW 1506
KE++RL P R L +Y +P T++ + +G F S S P W
Sbjct: 382 KESMRLTPSVPFTTRTLDKATVLGEYALPKGTVLMLNTQVLGSSEDNFEDS-SQFRPERW 440
Query: 1507 V 1509
+
Sbjct: 441 L 441
>ref|NP_001122387.1| 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial isoform 2
precursor [Homo sapiens].
Length = 448
Score = 162 bits (411), Expect = 6e-40
Identities = 112/405 (27%), Positives = 191/405 (47%), Gaps = 15/405 (3%)
Frame = +1
Query: 292 PRECPGHPRVGTGEGACISTKTPRPFSEIPSPGDNGWI---NLYRFWKEKGTQKIHYHHV 462
PRE P P GE + PG W +L + + G +K H V
Sbjct: 38 PREVPVCPLTAGGETQ----------NAAALPGPTSWPLLGSLLQILWKGGLKKQHDTLV 87
Query: 463 QNFQKYGPIYREKLGNLESVYIIDPEDVALLFKFEGPNPERYNIPPWVAYHQHYQKPVGV 642
+ +KYG I+R KLG+ ESV++ P + L++ E P+R I PW AY + ++ G+
Sbjct: 88 EYHKKYGKIFRMKLGSFESVHLGSPCLLEALYRTESAYPQRLEIKPWKAYRDYRKEGYGL 147
Query: 643 LLKKSGAWKKDRLVLNTEVMAPEAIKNFIPLLDTVSQDFVGVLHRRIKQQG--------- 795
L+ + W++ R ++M P + ++ V DF+G + ++G
Sbjct: 148 LILEGEDWQRVRSAFQKKLMKPGEVMKLDNKINEVLADFMGRIDELCDERGHVEDLYSEL 207
Query: 796 -SGKFSAITNVIFGERLGMLEEIVDPEAQKFIDAVYQMFHTSVPMLNLPPDLFRLFRTKT 972
F +I V++ +R G+L++ EA FI A+ M T M+ P +L + TK
Sbjct: 208 NKWSFESICLVLYEKRFGLLQKNAGDEAVNFIMAIKTMMSTFGRMMVTPVELHKSLNTKV 267
Query: 973 WRDHVAAWDTIFNKAEKYTQNFYWDLRRKREFNNYPG--ILYRLLGNDKLLSEDVKANVT 1146
W+DH AWDTIF + N R +++ P L + ++L +++ A VT
Sbjct: 268 WQDHTLAWDTIFKSVKACIDN------RLEKYSQQPSADFLCDIYHQNRLSKKELYAAVT 321
Query: 1147 EMLAGGVDTTSMTLQWHLYEMARSLNVQEMLREEVLNARRQAQGDTSKMLQLVPLLKASI 1326
E+ V+TT+ +L W LY ++R+ VQ+ L +E+ + + Q ++ L+ +P LKA +
Sbjct: 322 ELQLAAVETTANSLMWILYNLSRNPQVQQKLLKEIQSVLPENQVPRAEDLRNMPYLKACL 381
Query: 1327 KETLRLHPISVTLQRYLVNDLGSRDYMIPAKTLVQVAVYAMGRDP 1461
KE++RL P R L +Y +P + + + A +P
Sbjct: 382 KESMRLTPSVPFTTRTLDKATVLGEYALPKGIVRKYDIQATDNEP 426
>ref|NP_000775.1| sterol 26-hydroxylase, mitochondrial precursor [Homo sapiens].
Length = 531
Score = 137 bits (345), Expect = 3e-32
Identities = 110/443 (24%), Positives = 183/443 (41%), Gaps = 18/443 (4%)
Frame = +1
Query: 235 RGLALRSVLVKGCQPFLSAPRECPGHPRVGTGEGACISTKTPRPFSEIPSPGDNGWINLY 414
RGL K P + G P G G + R EIP G + +
Sbjct: 18 RGLCPHGARAKAAIPAALPSDKATGAPGAGPGV-----RRRQRSLEEIPRLGQLRFF--F 70
Query: 415 RFWKEKGTQKIHYHHVQNFQKYGPIYREKLGNLESVYIIDPEDVALLFKFEGPNPERYNI 594
+ + + ++H V KYGP++ LG V + + + + EG P R ++
Sbjct: 71 QLFVQGYALQLHQLQVLYKAKYGPMWMSYLGPQMHVNLASAPLLEQVMRQEGKYPVRNDM 130
Query: 595 PPWVAYHQHYQKPVGVLLKKSGAWKKDRLVLNTEVMAPEAIKNFIPLLDTVSQDFVGVLH 774
W + + G + W + R LN ++ P + + V DF+ L
Sbjct: 131 ELWKEHRDQHDLTYGPFTTEGHHWYQLRQALNQRLLKPAEAALYTDAFNEVIDDFMTRLD 190
Query: 775 RRIKQQGSGK-------------FSAITNVIFGERLGMLEEIVDPEAQKFIDAVYQMFHT 915
+ + SG AI ++F +R+G L+ + + F+ ++ MF
Sbjct: 191 QLRAESASGNQVSDMAQLFYYFALEAICYILFEKRIGCLQRSIPEDTVTFVRSIGLMFQN 250
Query: 916 SVPMLNLPPDLFRLFRTKTWRDHVAAWDTIFNKAEKYTQNFYWDLRRKREFNNYPGI--- 1086
S+ LP + W+ ++ W+ IF+ +K D+ + + GI
Sbjct: 251 SLYATFLPKWTRPVL--PFWKRYLDGWNAIFSFGKKLIDEKLEDMEAQLQAAGPDGIQVS 308
Query: 1087 --LYRLLGNDKLLSEDVKANVTEMLAGGVDTTSMTLQWHLYEMARSLNVQEMLREEVLNA 1260
L+ LL + +L + ++ E+L GVDTTS TL W LY +++ +QE L EEV+
Sbjct: 309 GYLHFLLASGQLSPREAMGSLPELLMAGVDTTSNTLTWALYHLSKDPEIQEALHEEVVGV 368
Query: 1261 RRQAQGDTSKMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLGSRDYMIPAKTLVQVAV 1440
Q K +PLLKA +KETLRL+P+ T R + ++ ++ P T
Sbjct: 369 VPAGQVPQHKDFAHMPLLKAVLKETLRLYPVVPTNSRIIEKEIEVDGFLFPKNTQFVFCH 428
Query: 1441 YAMGRDPPFFSKSXSLTXPXGWV 1509
Y + RDP FS+ S P W+
Sbjct: 429 YVVSRDPTAFSEPESF-QPHRWL 450
>ref|NP_001001665.3| cytochrome P450 27C1 [Homo sapiens].
Length = 372
Score = 109 bits (273), Expect = 6e-24
Identities = 82/298 (27%), Positives = 139/298 (46%), Gaps = 18/298 (6%)
Frame = +1
Query: 676 RLVLNTEVMAPEAIKNFIPLLDTVSQDFVGVLHRRIKQQGSGK-------------FSAI 816
R VL ++ P+ + + ++ V D + ++ Q G+ +
Sbjct: 2 RSVLRQRILKPKDVAIYSGEVNQVIADLIKRIYLLRSQAEDGETVTNVNDLFFKYSMEGV 61
Query: 817 TNVIFGERLGMLEEIVDPEAQKFIDAV---YQMFHTSVPMLNLPPDLFRLFRTKTWRDHV 987
+++ RLG LE + ++I+A+ + MF TS+ +P L R F K WR+
Sbjct: 62 ATILYESRLGCLENSIPQLTVEYIEALELMFSMFKTSMYAGAIPRWL-RPFIPKPWREFC 120
Query: 988 AAWDTIFNKAEKYTQNFYWDLRRKREFNNYP--GILYRLLGNDKLLSEDVKANVTEMLAG 1161
+WD +F ++ + N D++ + + G+L L + L +++ ANVTEML
Sbjct: 121 RSWDGLFKFSQIHVDNKLRDIQYQMDRGRRVSGGLLTYLFLSQALTLQEIYANVTEMLLA 180
Query: 1162 GVDTTSMTLQWHLYEMARSLNVQEMLREEVLNARRQAQGDTSKMLQLVPLLKASIKETLR 1341
GVDTTS TL W +Y +AR VQ+ + E++ + T+ + VPL++A +KETLR
Sbjct: 181 GVDTTSFTLSWTVYLLARHPEVQQTVYREIVKNLGERHVPTAADVPKVPLVRALLKETLR 240
Query: 1342 LHPISVTLQRYLVNDLGSRDYMIPAKTLVQVAVYAMGRDPPFFSKSXSLTXPXGWVXK 1515
L P+ R DL Y+IP T + + YA F ++ P W+ K
Sbjct: 241 LFPVLPGNGRVTQEDLVIGGYLIPKGTQLALCHYATSYQDENFPRAKEF-RPERWLRK 297
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 57,788,516
Number of extensions: 1707140
Number of successful extensions: 5943
Number of sequences better than 1.0e-05: 32
Number of HSP's gapped: 5893
Number of HSP's successfully gapped: 32
Length of query: 505
Length of database: 18,297,164
Length adjustment: 107
Effective length of query: 398
Effective length of database: 14,770,016
Effective search space: 5878466368
Effective search space used: 5878466368
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-006985
(1517 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_062753.3| cholesterol side-chain cleavage enzyme, mitocho... 652 0.0
Alignment gi|NP_034121.3| cytochrome P450 11B2, mitochondrial [Mus muscul... 254 1e-67
Alignment gi|NP_001028401.2| cytochrome P450, family 11, subfamily b, pol... 244 1e-64
Alignment gi|NP_034126.1| 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mito... 170 3e-42
Alignment gi|NP_034139.2| 25-hydroxyvitamin D-1 alpha hydroxylase, mitoch... 169 5e-42
Alignment gi|NP_077226.2| sterol 26-hydroxylase, mitochondrial [Mus muscu... 143 4e-34
Alignment gi|NP_062766.2| cytochrome P450 3A25 [Mus musculus]. 68 2e-11
Alignment gi|NP_031844.1| cytochrome P450 3A11 [Mus musculus]. 67 3e-11
Alignment gi|NP_001093650.1| cytochrome P450, family 3, subfamily a, poly... 66 6e-11
Alignment gi|NP_001093657.1| predicted gene 9705 [Mus musculus]. 66 6e-11
>ref|NP_062753.3| cholesterol side-chain cleavage enzyme, mitochondrial precursor [Mus
musculus].
Length = 526
Score = 652 bits (1682), Expect = 0.0
Identities = 318/443 (71%), Positives = 369/443 (83%), Gaps = 13/443 (2%)
Frame = +1
Query: 226 MLARGLALRSVLVKGCQPFLSAPRECPGHPRVGTGEGACISTKTPRPFSEIPSPGDNGWI 405
MLA+GL+LRSVLVKGCQPFLS + P + TG+GA ST +PR F+EIPSPGDNGW+
Sbjct: 1 MLAKGLSLRSVLVKGCQPFLSPTWQ---GPVLSTGKGAGTSTSSPRSFNEIPSPGDNGWL 57
Query: 406 NLYRFWKEKGTQKIHYHHVQNFQKYGPIYREKLGNLESVYIIDPEDVALLFKFEGPNPER 585
NLY FW+E GTQKIHYH +Q+FQKYGPIYREKLG LESVYI+DP+D ++LF EGPNPER
Sbjct: 58 NLYHFWRESGTQKIHYHQMQSFQKYGPIYREKLGTLESVYIVDPKDASILFSCEGPNPER 117
Query: 586 YNIPPWVAYHQHYQKPVGVLLKKSGAWKKDRLVLNTEVMAPEAIKNFIPLLDTVSQDFVG 765
+ +PPWVAYHQ+YQ+P+GVL K S AWKKDR+VLN EVMAP AIKNF+PLL+ V+QDF+
Sbjct: 118 FLVPPWVAYHQYYQRPIGVLFKSSDAWKKDRIVLNQEVMAPGAIKNFVPLLEGVAQDFIK 177
Query: 766 VLHRRIKQQGSGKFS-------------AITNVIFGERLGMLEEIVDPEAQKFIDAVYQM 906
VLHRRIKQQ SG FS +I++VIFGER+GMLEEIVDPEAQ+FI+AVYQM
Sbjct: 178 VLHRRIKQQNSGNFSGVISDDLFRFSFESISSVIFGERMGMLEEIVDPEAQRFINAVYQM 237
Query: 907 FHTSVPMLNLPPDLFRLFRTKTWRDHVAAWDTIFNKAEKYTQNFYWDLRRKREFNNYPGI 1086
FHTSVPMLNLPPD FRL RTKTW+DH AAWD IFNKA++YTQNFYWDLR+KR+F+ YPG+
Sbjct: 238 FHTSVPMLNLPPDFFRLLRTKTWKDHAAAWDVIFNKADEYTQNFYWDLRQKRDFSQYPGV 297
Query: 1087 LYRLLGNDKLLSEDVKANVTEMLAGGVDTTSMTLQWHLYEMARSLNVQEMLREEVLNARR 1266
LY LLG +KL ++++AN+TEMLAGGVDTTSMTLQW+LYEMA +L VQEMLR EVL ARR
Sbjct: 298 LYSLLGGNKLPFKNIQANITEMLAGGVDTTSMTLQWNLYEMAHNLKVQEMLRAEVLAARR 357
Query: 1267 QAQGDTSKMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLGSRDYMIPAKTLVQVAVYA 1446
QAQGD +KM+QLVPLLKASIKETLRLHPISVTLQRY VNDL R+Y IPAKTLVQVA +A
Sbjct: 358 QAQGDMAKMVQLVPLLKASIKETLRLHPISVTLQRYTVNDLVLRNYKIPAKTLVQVASFA 417
Query: 1447 MGRDPPFFSKSXSLTXPXGWVXK 1515
MGRDP FF P W+ K
Sbjct: 418 MGRDPGFFPNPNKF-DPTRWLEK 439
>ref|NP_034121.3| cytochrome P450 11B2, mitochondrial [Mus musculus].
Length = 502
Score = 254 bits (649), Expect = 1e-67
Identities = 142/412 (34%), Positives = 229/412 (55%), Gaps = 13/412 (3%)
Frame = +1
Query: 280 FLSAPRECPGHPRVGTGEGACISTKTPRPFSEIPSPGDNGWINLYRFWKEKGTQKIHYHH 459
+L+ P +C R G A ++ KT +PF IP N W+ + + +E+G + +H
Sbjct: 12 WLARPWQCLHRTRA-LGTTATLAPKTLQPFEAIPQYSRNKWLKMIQILREQGQENLHLEM 70
Query: 460 VQNFQKYGPIYREKLGNLESVYIIDPEDVALLFKFEGPNPERYNIPPWVAYHQHYQKPVG 639
Q F++ GPI+R +G + V ++ PED L + E P R ++ PWVA+ + G
Sbjct: 71 HQVFRELGPIFRHSVGKTQIVSVMLPEDAEKLHQVESMLPRRMHLEPWVAHRELRGLRRG 130
Query: 640 VLLKKSGAWKKDRLVLNTEVMAPEAIKNFIPLLDTVSQDFVGVLHRRIKQQGSGKFS--- 810
V L W+ +RL LN V++P+A++ F+P++D V++DF+ L ++ Q G +
Sbjct: 131 VFLLNGPEWRLNRLRLNRNVLSPKAVQKFVPMVDMVARDFLETLKEKVLQNARGSLTMDV 190
Query: 811 ----------AITNVIFGERLGMLEEIVDPEAQKFIDAVYQMFHTSVPMLNLPPDLFRLF 960
A +FGERLG+L + P + KFI A++ MF ++ +L LP L R
Sbjct: 191 QQSLFNYTIEASNFALFGERLGLLGHDLSPGSLKFIHALHSMFKSTSQLLFLPKSLTRWT 250
Query: 961 RTKTWRDHVAAWDTIFNKAEKYTQNFYWDLRRKREFNNYPGILYRLLGNDKLLSEDVKAN 1140
T+ W++H AWD I A + + +LR Y GI+ L+ L + +KAN
Sbjct: 251 STRVWKEHFDAWDVISEYANRCIWKVHQELRLGSS-QTYSGIVAELISQGSLPLDAIKAN 309
Query: 1141 VTEMLAGGVDTTSMTLQWHLYEMARSLNVQEMLREEVLNARRQAQGDTSKMLQLVPLLKA 1320
E+ AG VDTT++ L L+E+AR+ +VQ+ LR+E L A + K + +PLL+A
Sbjct: 310 SMELTAGSVDTTAIPLVMTLFELARNPDVQKALRQESLAAEASIAANPQKAMSDLPLLRA 369
Query: 1321 SIKETLRLHPISVTLQRYLVNDLGSRDYMIPAKTLVQVAVYAMGRDPPFFSK 1476
++KETLRL+P+ L+R L +DL ++Y +PA TLV + +Y+MGR+P F +
Sbjct: 370 ALKETLRLYPVGGFLERILSSDLVLQNYHVPAGTLVLLYLYSMGRNPAVFPR 421
>ref|NP_001028401.2| cytochrome P450, family 11, subfamily b, polypeptide 1 [Mus
musculus].
Length = 501
Score = 244 bits (624), Expect = 1e-64
Identities = 135/412 (32%), Positives = 228/412 (55%), Gaps = 13/412 (3%)
Frame = +1
Query: 280 FLSAPRECPGHPRVGTGEGACISTKTPRPFSEIPSPGDNGWINLYRFWKEKGTQKIHYHH 459
+L+ P +C R G A ++ KT +PF IP N W+ + + +E+G + +H
Sbjct: 12 WLARPWQCLHRTRA-LGTTATLAPKTLQPFEAIPQYSRNKWLKMIQILREQGQENLHLEM 70
Query: 460 VQNFQKYGPIYREKLGNLESVYIIDPEDVALLFKFEGPNPERYNIPPWVAYHQHYQKPVG 639
Q F++ GPI+R +G + V++ PEDV L++ E +P R + W+ + + G
Sbjct: 71 HQVFRELGPIFRHSVGKTQIVFVTLPEDVEKLYQVESTHPCRMPLESWIVHRELRGLGRG 130
Query: 640 VLLKKSGAWKKDRLVLNTEVMAPEAIKNFIPLLDTVSQDFVGVLHRRIKQQGSGKFS--- 810
V L W +RL LN V++P+A++ F+PL+D +++DFV L +++ + G FS
Sbjct: 131 VFLLNGPEWYFNRLQLNPNVLSPKAVQKFVPLVDGIARDFVDNLKKKMLESVHGSFSMDF 190
Query: 811 ----------AITNVIFGERLGMLEEIVDPEAQKFIDAVYQMFHTSVPMLNLPPDLFRLF 960
A V+FGERLG++ + P++ KF+ ++ MF T+ +L LP L R
Sbjct: 191 QSSVFNYTIEASHFVLFGERLGLIGRDLSPDSLKFLHTLHSMFKTTTQLLYLPRSLTRWT 250
Query: 961 RTKTWRDHVAAWDTIFNKAEKYTQNFYWDLRRKREFNNYPGILYRLLGNDKLLSEDVKAN 1140
T+ W++++ +WD I K +N Y +L R + L+ L + ++AN
Sbjct: 251 STRVWKENLESWDFISEYVTKCIKNVYRELAEGRP--QSWSVTAELVAERTLSMDAIQAN 308
Query: 1141 VTEMLAGGVDTTSMTLQWHLYEMARSLNVQEMLREEVLNARRQAQGDTSKMLQLVPLLKA 1320
E++AG DTTS L +E+AR+ +VQ+ LR+E L A + K + +PLL+A
Sbjct: 309 SMELIAGSTDTTSTPLVMTFFELARNPDVQQALRQESLAAEASIAANPQKAMSDLPLLRA 368
Query: 1321 SIKETLRLHPISVTLQRYLVNDLGSRDYMIPAKTLVQVAVYAMGRDPPFFSK 1476
++KETLRL+P+ L+R L +DL ++Y +PA T++ V +Y+MGR+P F +
Sbjct: 369 ALKETLRLYPVGTFLERILSSDLVLQNYHVPAGTVLNVNLYSMGRNPAVFPR 420
>ref|NP_034126.1| 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial precursor
[Mus musculus].
Length = 514
Score = 170 bits (430), Expect = 3e-42
Identities = 117/425 (27%), Positives = 197/425 (46%), Gaps = 16/425 (3%)
Frame = +1
Query: 289 APRECPGHPRVGTGEGACISTKTPRPFSEIPSPGDNGWINLYR----FWKEKGTQKIHYH 456
AP+E P P + GE +++ PG W L FWK G +K H
Sbjct: 37 APKEVPLCPLMTDGETRNVTSL----------PGPTNWPLLGSLLEIFWKG-GLKKQHDT 85
Query: 457 HVQNFQKYGPIYREKLGNLESVYIIDPEDVALLFKFEGPNPERYNIPPWVAYHQHYQKPV 636
+ +KYG I+R KLG+ +SV++ P + L++ E +P+R I PW AY H +
Sbjct: 86 LAEYHKKYGQIFRMKLGSFDSVHLGSPSLLEALYRTESAHPQRLEIKPWKAYRDHRNEAY 145
Query: 637 GVLLKKSGAWKKDRLVLNTEVMAPEAIKNFIPLLDTVSQDFVGVLHRRIKQQG------- 795
G+++ + W++ R ++M P I ++ V DF+G + ++G
Sbjct: 146 GLMILEGQEWQRVRSAFQKKLMKPVEIMKLDKKINEVLADFMGQIDELRDERGRIQDLYS 205
Query: 796 ---SGKFSAITNVIFGERLGMLEEIVDPEAQKFIDAVYQMFHTSVPMLNLPPDLFRLFRT 966
F +I V++ +R G+L++ + EA FI A+ M T M+ P +L + T
Sbjct: 206 ELNKWSFESICLVLYEKRFGLLQKDTEEEALTFIAAIKTMMSTFGKMMVTPVELHKRLNT 265
Query: 967 KTWRDHVAAWDTIFNKAEKYTQNFYWDLRRKREFNNYPG--ILYRLLGNDKLLSEDVKAN 1140
K W+ H AWDTIF + + R ++ PG L + D L +++ A
Sbjct: 266 KVWQAHTLAWDTIFKSVKPCIDH------RLERYSQQPGADFLCDIYQQDHLSKKELYAA 319
Query: 1141 VTEMLAGGVDTTSMTLQWHLYEMARSLNVQEMLREEVLNARRQAQGDTSKMLQLVPLLKA 1320
VTE+ V+TT+ +L W LY ++R+ VQ+ L E+ + Q ++ ++ +P LKA
Sbjct: 320 VTELQLAAVETTANSLMWILYNLSRNPQVQQRLLREIQSVLPDNQTPRAEDVRNMPYLKA 379
Query: 1321 SIKETLRLHPISVTLQRYLVNDLGSRDYMIPAKTLVQVAVYAMGRDPPFFSKSXSLTXPX 1500
+KE++RL P R L +Y +P T++ + +G F + P
Sbjct: 380 CLKESMRLTPSVPFTTRTLDKPTVLGEYTLPKGTVLTLNTQVLGSSEDNFEDADKF-RPE 438
Query: 1501 GWVXK 1515
W+ K
Sbjct: 439 RWLEK 443
>ref|NP_034139.2| 25-hydroxyvitamin D-1 alpha hydroxylase, mitochondrial [Mus
musculus].
Length = 507
Score = 169 bits (428), Expect = 5e-42
Identities = 125/404 (30%), Positives = 188/404 (46%), Gaps = 21/404 (5%)
Frame = +1
Query: 361 RPFSEIPSPGDNGWINLYRFWKEKGTQKIHYHHVQNFQKYGPIYREKLGNLESVYIIDPE 540
R S+IP P + L + + G ++H V +YGPI+ G L +VY+ DP
Sbjct: 35 RSLSDIPGPSTLSF--LAELFCKGGLSRLHELQVHGAARYGPIWSGSFGTLRTVYVADPT 92
Query: 541 DVALLFKFEGPNPERYNIPPWVAYHQHYQKPVGVLLKKSGAWKKDRLVLNTEVMAPEAIK 720
V L + E PER + W + + +Q+ G+L W++ R +L ++ P+A
Sbjct: 93 LVEQLLRQESHCPERCSFSSWAEHRRRHQRACGLLTADGEEWQRLRSLLAPLLLRPQAAA 152
Query: 721 NFIPLLDTVSQDFVGVLHRRIKQQGSG-------------KF--SAITNVIFGERLGMLE 855
+ LD V +D V L RR + +GSG KF +I V+ G RLG LE
Sbjct: 153 GYAGTLDNVVRDLVRRL-RRQRGRGSGLPGLVLDVAGEFYKFGLESIGAVLLGSRLGCLE 211
Query: 856 EIVDPEAQKFIDAVYQMFHTSVPMLNLPPDLFRLFRTKTWRDHVAAWDTIFNKAEKYTQN 1035
V P+ + FI AV +F +++ + +P L L W WD +F A+++ +
Sbjct: 212 AEVPPDTETFIHAVGSVFVSTLLTMAMPNWLHHLI-PGPWARLCRDWDQMFAFAQRHVEL 270
Query: 1036 FYWDLRRKREFNNYPGI-----LYRLLGNDKLLSEDVKANVTEMLAGGVDTTSMTLQWHL 1200
+ + + + L L +K+ + + NVTE+L GVDT S TL W L
Sbjct: 271 REGEAAMRNQGKPEEDMPSGHHLTHFLFREKVSVQSIVGNVTELLLAGVDTVSNTLSWTL 330
Query: 1201 YEMARSLNVQEMLREEV-LNARRQAQGDTSKMLQLVPLLKASIKETLRLHPISVTLQRYL 1377
YE++R +VQ L E+ R L +PLLKA IKE LRL+P+ R
Sbjct: 331 YELSRHPDVQTALHSEITAGTRGSCAHPHGTALSQLPLLKAVIKEVLRLYPVVPGNSRVP 390
Query: 1378 VNDLGSRDYMIPAKTLVQVAVYAMGRDPPFFSKSXSLTXPXGWV 1509
D+ +Y+IP TLV + YA RDP F S P W+
Sbjct: 391 DRDIRVGNYVIPQDTLVSLCHYATSRDPTQFPDPNSFN-PARWL 433
>ref|NP_077226.2| sterol 26-hydroxylase, mitochondrial [Mus musculus].
Length = 533
Score = 143 bits (360), Expect = 4e-34
Identities = 118/449 (26%), Positives = 191/449 (42%), Gaps = 19/449 (4%)
Frame = +1
Query: 226 MLARGLALRSVLVKGCQPFLSAPRECPGHPRVGTGEGACISTKTPRPFSEIPSPGDNGWI 405
++ RGL + K P +E P GTG+ PR S PG
Sbjct: 18 VVGRGLCPQGARAKATIPAALQAQESTEGP--GTGQDR------PRLRSPAELPGTGTLQ 69
Query: 406 NLYRFWKEKGTQKIHYHHVQNFQKYGPIYREKLGNLESVYIIDPEDVALLFKFEGPNPER 585
L++ + + + V N KYGP++ G +V + + + + EG P R
Sbjct: 70 FLFQLFLQGYVLHLPDLQVLNKTKYGPMWTTSFGTYTNVNLASAPLLEQVMRQEGKYPIR 129
Query: 586 YNIPPWVAYHQHYQKPVGVLLKKSGAWKKDRLVLNTEVMAPEAIKNFIPLLDTVSQDFVG 765
++ W + H G+ + + W R L ++ P+ + L+ V DF+
Sbjct: 130 DHMDQWKDHRDHKGLTYGIFIAQGEQWYHLRQALKQRLLKPDEAALYTDALNEVISDFIT 189
Query: 766 VLHRRIKQQGSGK-------------FSAITNVIFGERLGMLEEIVDPEAQKFIDAVYQM 906
L + + SG AIT ++F +R+G L+ + + FI +V M
Sbjct: 190 RLDQVRAESESGDQVPDMAHLLYHLALEAITYILFEKRIGCLKPSIPEDTAAFIRSVAIM 249
Query: 907 FHTSVPMLNLPPDLFRLFRTKTWRDHVAAWDTIFNKAEKYTQNFYWDLRRKREFNNYPGI 1086
F SV + LP L W+ ++ WD IF+ +K +L+ + + G+
Sbjct: 250 FQNSVYITFLPKWTRPLL--PFWKRYLNGWDNIFSFGKKLIDEKVQELKAQLQETGPDGV 307
Query: 1087 -----LYRLLGNDKLLSEDVKANVTEMLAGGVDTTSMTLQWHLYEMARSLNVQEMLREEV 1251
L+ LL N+ L +++ E+L GVDTTS TL W LY +++S +QE L +EV
Sbjct: 308 RVSGYLHFLLTNELLSTQETIGTFPELLLAGVDTTSNTLTWALYHLSKSPEIQEALHKEV 367
Query: 1252 LNARRQAQGDTSKMLQLVPLLKASIKETLRLHPISVTLQRYLV-NDLGSRDYMIPAKTLV 1428
+ K +PLLKA IKETLRL+P+ T R + + ++ P T
Sbjct: 368 TGVVPFGKVPQHKDFAHMPLLKAVIKETLRLYPVVPTNSRIITEKETEINGFLFPKNTQF 427
Query: 1429 QVAVYAMGRDPPFFSKSXSLTXPXGWVXK 1515
+ Y + RDP F + S P W+ K
Sbjct: 428 VLCHYVVSRDPSVFPEPNSF-QPHRWLRK 455
>ref|NP_062766.2| cytochrome P450 3A25 [Mus musculus].
Length = 503
Score = 67.8 bits (164), Expect = 2e-11
Identities = 81/362 (22%), Positives = 157/362 (43%), Gaps = 28/362 (7%)
Frame = +1
Query: 469 FQKYGPIYREKLGNLESVYIIDPEDVALLFKFEGPNPERYNIPPWVAYHQHYQKPVGVLL 648
++KYG I+ G + I+DPE + ++ E Y+ V ++ + PVG +
Sbjct: 65 YKKYGKIWGFYEGPQPILAIMDPEIIKIVLV-----KECYS----VFTNRRFFGPVGFMK 115
Query: 649 K-----KSGAWKKDRLVLNTEVMAPEAIKNFIPLLDTVSQDFVGVLHRRIKQQ------- 792
K + WK+ R +L+ + + +K P++ V L R ++
Sbjct: 116 KAITISEDEEWKRLRTLLSPTFTSGK-LKEMFPIMRQYGDILVRNLRREEEKGEPISMKD 174
Query: 793 --GSGKFSAITNVIFGERLGMLEEIVDPEAQKFIDAV-YQMFHTSVPMLNLPPDLFRLFR 963
G+ IT FG + L DP QK + +++F + + L P L ++
Sbjct: 175 IFGAYSMDVITGTSFGVNVDSLNNPQDPFVQKAKKILKFKIFDPFLLSIILFPFLTPIYE 234
Query: 964 TKTWRDHVAAWDTIFNK-AEKYTQNFYWDLRRKREFNNYPGIL--YRLLGN--------- 1107
+ +IF + + + + F ++++R +N + +L+ N
Sbjct: 235 MLNF--------SIFPRDSMNFFKKFVKRMKKERLASNQKNRVDFLQLMMNTQNSKGQES 286
Query: 1108 DKLLSE-DVKANVTEMLAGGVDTTSMTLQWHLYEMARSLNVQEMLREEVLNARRQAQGDT 1284
K LS+ ++ A + GG D TS ++ +YE+A +VQ+ L++E+ T
Sbjct: 287 QKALSDLEMAAQAVIFIFGGYDATSTSISLIMYELATHPDVQKKLQDEIDRTLPNKAPVT 346
Query: 1285 SKMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLGSRDYMIPAKTLVQVAVYAMGRDPP 1464
L + L + E+LRL+PI++ L+R D+ IP T+V + +Y + R+P
Sbjct: 347 YDALMDMEYLDMVVNESLRLYPIAIRLERVSKKDVEINGVFIPKGTVVMIPIYPLHRNPE 406
Query: 1465 FF 1470
++
Sbjct: 407 YW 408
>ref|NP_031844.1| cytochrome P450 3A11 [Mus musculus].
Length = 504
Score = 67.4 bits (163), Expect = 3e-11
Identities = 69/317 (21%), Positives = 130/317 (41%), Gaps = 35/317 (11%)
Frame = +1
Query: 631 PVGVLLK-----KSGAWKKDRLVLNTEVMAPEAIKNFIPLLDTVSQDFVGVLHRRIKQQ- 792
PVG++ K K WK+ R +L+ + + +K P+++ V L ++ K+
Sbjct: 110 PVGIMSKAISISKDDEWKRYRALLSPTFTSGK-LKEMFPVIEQYGDILVKYLRQKAKKGK 168
Query: 793 --------GSGKFSAITNVIFGERLGMLEEIVDPEAQK---------------------F 885
G+ IT+ FG + L DP +K F
Sbjct: 169 PVTMKDVLGAYSMDVITSTSFGVNVDSLNNPEDPFVEKAKKLLRFDFFDPLLFSVVLFPF 228
Query: 886 IDAVYQMFHTSVPMLNLPPDLFRLFRTKTWRDHVAAWDTIFNKAEKYTQNFYWDLRRKRE 1065
+ VY+M + + P D F+ R + D+ +K+ +F L
Sbjct: 229 LTPVYEMLNICM----FPKDSIEFFKKFVDRMKESRLDS----KQKHRVDFL-QLMMNSH 279
Query: 1066 FNNYPGILYRLLGNDKLLSEDVKANVTEMLAGGVDTTSMTLQWHLYEMARSLNVQEMLRE 1245
N+ + ++ L + ++ ++ + + G +TTS TL + L+ +A ++Q+ L++
Sbjct: 280 NNSKDKVSHKALSDMEITAQSII-----FIFAGYETTSSTLSFTLHSLATHPDIQKKLQD 334
Query: 1246 EVLNARRQAQGDTSKMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLGSRDYMIPAKTL 1425
E+ A T + + L + ETLRL+PI+ L+R D+ IP +
Sbjct: 335 EIDEALPNKAPPTYDTVMEMEYLDMVLNETLRLYPIANRLERVCKKDVELNGVYIPKGST 394
Query: 1426 VQVAVYAMGRDPPFFSK 1476
V + YA+ DP +S+
Sbjct: 395 VMIPSYALHHDPQHWSE 411
>ref|NP_001093650.1| cytochrome P450, family 3, subfamily a, polypeptide 57 [Mus
musculus].
Length = 503
Score = 66.2 bits (160), Expect = 6e-11
Identities = 81/359 (22%), Positives = 146/359 (40%), Gaps = 25/359 (6%)
Frame = +1
Query: 469 FQKYGPIYREKLGNLESVYIIDPEDVALLFKFEGPNPERYNIPPWVAYHQHYQKPVGVLL 648
++KYG I+ G + I+DPE + ++ E Y+ V ++ PVG L
Sbjct: 65 YKKYGKIWGFYEGPQPILAIMDPEIIKIVLV-----KECYS----VFTNRRPFGPVGFLK 115
Query: 649 K-----KSGAWKKDRLVLNTEVMAPEAIKNFIPLLDTVSQDFVGVLHRRIKQQ------- 792
K + WK+ R +L+ + + +K P++ V L R +++
Sbjct: 116 KSITISEDEEWKRLRTLLSPTFTSSK-LKEMFPIMRQYGDILVRNLRREEEKEEPINMKD 174
Query: 793 --GSGKFSAITNVIFGERLGMLEEIVDPEAQKFIDAV-YQMFHTSVPMLNLPPDLFRLFR 963
G+ IT G + L DP QK + ++ F + + L P L ++
Sbjct: 175 IFGAYSMDVITGTSCGVNIDSLNNPQDPFVQKIKKILKFKFFDPFLLSVVLFPFLTPIYE 234
Query: 964 TKTWRDHVAAWDTIFNKAEKYTQNFYWDLRRKREFNNYPGILYRLLGND---------KL 1116
F K K + D +K + +L+ N K
Sbjct: 235 MLNLSIFPRQSMNFFKKFVKKMKKDRLDYNQKNRVD-----FLQLMMNTQNSKGQESLKA 289
Query: 1117 LSE-DVKANVTEMLAGGVDTTSMTLQWHLYEMARSLNVQEMLREEVLNARRQAQGDTSKM 1293
LS+ ++ A + GG D TS ++ + +YE+A +VQ+ L++E+ A T
Sbjct: 290 LSDLEMAAQTLIFIFGGYDGTSTSISFIMYELATHPDVQKKLQDEIDRALPNKAPVTYDA 349
Query: 1294 LQLVPLLKASIKETLRLHPISVTLQRYLVNDLGSRDYMIPAKTLVQVAVYAMGRDPPFF 1470
L + L + E+LRL+P+ + R+ D+ IP T+V + +Y + RDP ++
Sbjct: 350 LMDMEYLDMVVNESLRLYPVVSRIDRFSKKDVEIHGVFIPKGTIVMIPIYPLHRDPEYW 408
>ref|NP_001093657.1| predicted gene 9705 [Mus musculus].
Length = 546
Score = 66.2 bits (160), Expect = 6e-11
Identities = 97/401 (24%), Positives = 162/401 (40%), Gaps = 40/401 (9%)
Frame = +1
Query: 379 PSPGDNGWINLYRFWKEKGTQKIHYHHVQNFQKYGPIYREK----LGNLESVY-IIDPED 543
P P W F G + + +Q + G YR+ LG + V I+DP
Sbjct: 52 PQPPKRNW-----FLGHLGMIEHNEEGMQLMTEAGQTYRDVHLCWLGPVIPVLRIVDPAF 106
Query: 544 VALLF---KFEGPNPERYN--IPPWVAYHQHYQKPVGVLLKKSGAWKKDRLVLNTEVMAP 708
VA L P ++ + PW+ G+ L W + R +L T
Sbjct: 107 VAPLLLASALVAPKDTTFHTFVKPWLGD--------GLFLNSGDKWSRHRRLL-TPAFHF 157
Query: 709 EAIKNFIPLLDTVSQDFVGVLH---RRIKQQGSGKFSAITNVIFGERLGMLEEIV---DP 870
+ +K ++ + + V ++H + + +GS + ++ L L++ + D
Sbjct: 158 DILKPYVKIFN----QSVNIMHAKWKHLSSEGSARLEMFEHISL-MTLDSLQKCLFGFDS 212
Query: 871 EAQK----FIDAVYQMFHTSVP---MLNLPPDLFRLFRTKTWRDHVAAWDTIFN------ 1011
Q+ +I A+ ++ + L L D F + T R A D + N
Sbjct: 213 NCQESPSEYISAILELSSLVIKRSHQLFLFVD-FLYYHTADGRRFRKACDLVHNFTDAVI 271
Query: 1012 KAEKYT---QNFYWDLRRKREFNNYPGILYRLLGNDK----LLSEDVKANVTEMLAGGVD 1170
+ ++T QN L+ K + I LL D+ L ED++A + GG D
Sbjct: 272 RERRHTLSSQNHDEFLKSKTKSKTLDFIDVLLLAKDEHGKELSDEDIRAEADTFMFGGHD 331
Query: 1171 TTSMTLQWHLYEMARSLNVQEMLREEV---LNARRQAQGDTSKMLQLVPLLKASIKETLR 1341
TT+ L W LY +AR QE R+EV L R + + + QL P L IKE+LR
Sbjct: 332 TTASALSWILYNLARHPEYQERCRQEVQELLRGREPQEIEWDDLAQL-PFLTMCIKESLR 390
Query: 1342 LHPISVTLQRYLVNDLGSRD-YMIPAKTLVQVAVYAMGRDP 1461
LHP + L R D+ D +IP + ++++ + +P
Sbjct: 391 LHPPVIDLLRRCTRDIVLPDGRVIPKGNICVISIFGIHHNP 431
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 48,772,887
Number of extensions: 1421001
Number of successful extensions: 5084
Number of sequences better than 1.0e-05: 38
Number of HSP's gapped: 5025
Number of HSP's successfully gapped: 38
Length of query: 505
Length of database: 15,617,559
Length adjustment: 106
Effective length of query: 399
Effective length of database: 12,433,743
Effective search space: 4961063457
Effective search space used: 4961063457
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-006985
(1517 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_999592.1| cholesterol side-chain cleavage enzyme, mitocho... 837 0.0
Alignment gi|NP_999160.1| 25-hydroxyvitamin D-1 alpha hydroxylase, mitoch... 177 2e-44
Alignment gi|NP_999240.2| 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mito... 162 6e-40
Alignment gi|NP_001230233.1| sterol 26-hydroxylase, mitochondrial precurs... 126 3e-29
Alignment gi|NP_999588.1| cytochrome P450 3A29 [Sus scrofa]. 62 8e-10
Alignment gi|XP_003128078.2| PREDICTED: cytochrome P450 4A24-like [Sus sc... 60 3e-09
Alignment gi|XP_003128009.2| PREDICTED: cytochrome P450 2J2-like, partial... 59 6e-09
Alignment gi|XP_003354175.1| PREDICTED: leukotriene-B(4) omega-hydroxylas... 59 7e-09
Alignment gi|NP_999590.1| taurochenodeoxycholic 6 alpha-hydroxylase [Sus ... 59 7e-09
Alignment gi|XP_003127953.1| PREDICTED: cytochrome P450 4A11-like [Sus sc... 58 1e-08
>ref|NP_999592.1| cholesterol side-chain cleavage enzyme, mitochondrial precursor [Sus
scrofa].
Length = 520
Score = 837 bits (2161), Expect = 0.0
Identities = 415/443 (93%), Positives = 417/443 (94%), Gaps = 13/443 (2%)
Frame = +1
Query: 226 MLARGLALRSVLVKGCQPFLSAPRECPGHPRVGTGEGACISTKTPRPFSEIPSPGDNGWI 405
MLARGLALRSVLVKGCQPFLSAPRECPGHPRVGTGEGACISTKTPRPFSEIPSPGDNGWI
Sbjct: 1 MLARGLALRSVLVKGCQPFLSAPRECPGHPRVGTGEGACISTKTPRPFSEIPSPGDNGWI 60
Query: 406 NLYRFWKEKGTQKIHYHHVQNFQKYGPIYREKLGNLESVYIIDPEDVALLFKFEGPNPER 585
NLYRFWKEKGTQKIHYHHVQNFQKYGPIYREKLGNLESVYIIDPEDVALLFKFEGPNPER
Sbjct: 61 NLYRFWKEKGTQKIHYHHVQNFQKYGPIYREKLGNLESVYIIDPEDVALLFKFEGPNPER 120
Query: 586 YNIPPWVAYHQHYQKPVGVLLKKSGAWKKDRLVLNTEVMAPEAIKNFIPLLDTVSQDFVG 765
YNIPPWVAYHQHYQKPVGVLLKKSGAWKKDRLVLNTEVMAPEAIKNFIPLLDTVSQDFVG
Sbjct: 121 YNIPPWVAYHQHYQKPVGVLLKKSGAWKKDRLVLNTEVMAPEAIKNFIPLLDTVSQDFVG 180
Query: 766 VLHRRIKQQGSGKFS-------------AITNVIFGERLGMLEEIVDPEAQKFIDAVYQM 906
VLHRRIKQQGSGKFS +ITNVIFGERLGMLEEIVDPEAQKFIDAVYQM
Sbjct: 181 VLHRRIKQQGSGKFSGDIREDLFRFAFESITNVIFGERLGMLEEIVDPEAQKFIDAVYQM 240
Query: 907 FHTSVPMLNLPPDLFRLFRTKTWRDHVAAWDTIFNKAEKYTQNFYWDLRRKREFNNYPGI 1086
FHTSVPMLNLPPDLFRLFRTKTWRDHVAAWDTIFNKAEKYTQNFYWDLRRKREFNNYPGI
Sbjct: 241 FHTSVPMLNLPPDLFRLFRTKTWRDHVAAWDTIFNKAEKYTQNFYWDLRRKREFNNYPGI 300
Query: 1087 LYRLLGNDKLLSEDVKANVTEMLAGGVDTTSMTLQWHLYEMARSLNVQEMLREEVLNARR 1266
LYRLLGNDKLLSEDVKANVTEMLAGGVDTTSMTLQWHLYEMARSLNVQEMLREEVLNARR
Sbjct: 301 LYRLLGNDKLLSEDVKANVTEMLAGGVDTTSMTLQWHLYEMARSLNVQEMLREEVLNARR 360
Query: 1267 QAQGDTSKMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLGSRDYMIPAKTLVQVAVYA 1446
QAQGDTSKMLQLVPLLKASIKETLRLHPISVTLQRYLVNDL RDYMIPAKTLVQVAVYA
Sbjct: 361 QAQGDTSKMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQVAVYA 420
Query: 1447 MGRDPPFFSKSXSLTXPXGWVXK 1515
MGRDP FFS P W+ K
Sbjct: 421 MGRDPAFFSNPGQF-DPTRWLGK 442
>ref|NP_999160.1| 25-hydroxyvitamin D-1 alpha hydroxylase, mitochondrial [Sus scrofa].
Length = 504
Score = 177 bits (448), Expect = 2e-44
Identities = 127/413 (30%), Positives = 197/413 (47%), Gaps = 25/413 (6%)
Frame = +1
Query: 346 STKTPRPFSEIPSPGDNGWINLYRFWKEKGTQKIHYHHVQNFQKYGPIYREKLGNLESVY 525
S PR +++P P G+ L + + G ++H VQ ++GP++ G + +VY
Sbjct: 26 SDSAPRGLADLPGPSTPGF--LAELFCKGGLSRLHELQVQGAARFGPVWLASFGKVRTVY 83
Query: 526 IIDPEDVALLFKFEGPNPERYNIPPWVAYHQHYQKPVGVLLKKSGAWKKDRLVLNTEVMA 705
+ P V L + EGP PER + PW + + Q+ G+L + W++ R +L ++
Sbjct: 84 VAAPTLVEQLLRQEGPLPERCSFSPWTEHRRRRQRSCGLLTAEGEEWQRLRSLLAPLLLR 143
Query: 706 PEAIKNFIPLLDTVSQDFVGVLHRRIKQQ---GSG-------------KF--SAITNVIF 831
P+A + L V QD V RR++ Q G+G KF I V+
Sbjct: 144 PQAAARYAGTLHDVVQDLV----RRLRSQRGLGAGPPALVRDVAGEFYKFGLEGIAAVLL 199
Query: 832 GERLGMLEEIVDPEAQKFIDAVYQMFHTSVPMLNLPPDLFRLFRTKTWRDHVAAWDTIFN 1011
G RLG LE V P+ + FI AV +F +++ + +P L RL W WD +F
Sbjct: 200 GSRLGCLEPEVPPDTETFIRAVGSVFVSTLLTMAMPSWLHRLV-PGPWARLCRDWDQMFA 258
Query: 1012 KAEKYTQNFYWDLRRKREFNNYPGI-----LYRLLGNDKLLSEDVKANVTEMLAGGVDTT 1176
A+++ + + K + + L L ++L + + NVTE+L GVDT
Sbjct: 259 FAQEHVERREAEAAMKSQGKPEEDLGSGAHLTYFLFREELPAPSILGNVTELLLAGVDTV 318
Query: 1177 SMTLQWHLYEMARSLNVQEMLREEVLNARRQAQG--DTSKMLQLVPLLKASIKETLRLHP 1350
S TL W LYE++R VQ L E+ A + ++ +L +PLLKA +KE LRL+P
Sbjct: 319 SNTLSWALYELSRHPEVQMALHSEIKTALGPSSSAHPSATVLSQLPLLKAVVKEVLRLYP 378
Query: 1351 ISVTLQRYLVNDLGSRDYMIPAKTLVQVAVYAMGRDPPFFSKSXSLTXPXGWV 1509
+ R D+ DY+IP TLV + YA RDP F + S P W+
Sbjct: 379 VVPGNSRVPDKDICVGDYIIPKNTLVTLCHYATSRDPAQFPEPNSF-RPARWL 430
>ref|NP_999240.2| 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial [Sus
scrofa].
Length = 514
Score = 162 bits (409), Expect = 6e-40
Identities = 103/375 (27%), Positives = 187/375 (49%), Gaps = 12/375 (3%)
Frame = +1
Query: 421 WKEKGTQKIHYHHVQNFQKYGPIYREKLGNLESVYIIDPEDVALLFKFEGPNPERYNIPP 600
WK G +K H + +KYG I+R KLG+ +SV++ P + L++ E +P+R I P
Sbjct: 75 WKG-GLKKQHDTLAEYHRKYGKIFRMKLGSFDSVHLGSPCLLEALYRTESAHPQRLEIKP 133
Query: 601 WVAYHQHYQKPVGVLLKKSGAWKKDRLVLNTEVMAPEAIKNFIPLLDTVSQDFVGVLHRR 780
W AY + ++ G+L+ + W++ R ++M P + ++ V DF+ +
Sbjct: 134 WKAYRDYREEGYGLLILEGEDWQRVRSAFQKKLMKPMEVMKLDNKINEVLADFMSRIDEL 193
Query: 781 IKQQG----------SGKFSAITNVIFGERLGMLEEIVDPEAQKFIDAVYQMFHTSVPML 930
++G F +I V++ +R G+L++ EA FI A+ M T M+
Sbjct: 194 CDERGCIEDLYSELNKWSFESICLVLYEKRFGLLQKDAGEEALNFITAIKTMMSTFGKMM 253
Query: 931 NLPPDLFRLFRTKTWRDHVAAWDTIFNKAEKYTQNFYWDLRRKREFNNYPG--ILYRLLG 1104
P +L + TK W+ H AWDTIF + + R ++ P L +
Sbjct: 254 VTPVELHKNLNTKVWQAHTLAWDTIFKSVKSCIDH------RLEKYAEQPSADFLCDIYH 307
Query: 1105 NDKLLSEDVKANVTEMLAGGVDTTSMTLQWHLYEMARSLNVQEMLREEVLNARRQAQGDT 1284
+++L +++ A+VTE+ ++TT+ +L W LY ++R+ +VQ+ L +E+ + + Q
Sbjct: 308 HNQLSKKELYASVTELQLAAIETTANSLMWILYNLSRNPHVQQKLLKEIQSVLPENQMPR 367
Query: 1285 SKMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLGSRDYMIPAKTLVQVAVYAMGRDPP 1464
++ L+ +P LKA +KE++RL P R L + +Y +P T++ + Y +G +
Sbjct: 368 AEDLRNMPYLKACLKESMRLTPSVPFTTRTLDKAMVLGEYALPKGTVLMLNTYVLGTNEE 427
Query: 1465 FFSKSXSLTXPXGWV 1509
F S S P W+
Sbjct: 428 NFEDS-SQFRPERWL 441
>ref|NP_001230233.1| sterol 26-hydroxylase, mitochondrial precursor [Sus scrofa].
Length = 537
Score = 126 bits (317), Expect = 3e-29
Identities = 105/417 (25%), Positives = 180/417 (43%), Gaps = 19/417 (4%)
Frame = +1
Query: 322 GTGEGACISTKTPRPFSEIPSPGDNGWINLYRFWKEKGTQKIHYHHVQNFQKYGPIYREK 501
GTG G + R E+ PG L++ + +H V N KYGP++
Sbjct: 51 GTGPG----DRRLRSLKELSGPGRLRL--LFQLLAQGYVLHLHQLQVLNKAKYGPMWINY 104
Query: 502 LGNLESVYIIDPEDVALLFKFEGPNPERYNIPPWVAYHQHYQKPVGVLLKKSGAWKKDRL 681
+G V + + + + EG P R ++ W + G + +W + R
Sbjct: 105 IGPQIHVNVASAPLLEQVMRQEGKYPVRNDMDLWKEHRDLQGLTYGPFTTEGESWYRLRQ 164
Query: 682 VLNTEVMAPEAIKNFIPLLDTVSQDFVGVLHRRIKQQGSGK-------------FSAITN 822
LN ++ P + L+ V DF+ L++ + G AI
Sbjct: 165 ALNQRMLKPADAALYTNALNEVVDDFMVRLNQLRAESTLGDHVPDIAHQFYFFALEAICY 224
Query: 823 VIFGERLGMLEEIVDPEAQKFIDAVYQMFHTSVPMLNLPPDLFRLFRTKTWRDHVAAWDT 1002
++F +R+G LE + + + F+ +V MF S+ LP L WR ++ W+T
Sbjct: 225 ILFEKRIGCLERSIPQDTKAFVRSVGFMFQNSLYATFLPKWTRPLL--PYWRRYLDGWNT 282
Query: 1003 IFNKAEKYTQNFYWDLRRKREFNN-----YPGILYRLLGNDKLLSEDVKANVTEMLAGGV 1167
IF+ +K ++ + + G L+ LL + +L + + ++ E+L GV
Sbjct: 283 IFSFGKKLIDQKLEEIEAQLQAGGPEEPRISGYLHFLLTSGQLSPREAEGSLPELLMAGV 342
Query: 1168 DTTSMTLQWHLYEMARSLNVQEMLREEVLNARRQAQGDTSKMLQLVPLLKASIKETLRLH 1347
DTTS TL W LY ++++ +Q L EEV+ + K L +PLLKA +KETLRL+
Sbjct: 343 DTTSNTLTWALYHLSKNPEIQAALHEEVVGMVPAGRVPQYKDLAHMPLLKAVLKETLRLY 402
Query: 1348 PISVTLQRYLVN-DLGSRDYMIPAKTLVQVAVYAMGRDPPFFSKSXSLTXPXGWVXK 1515
P+ R + + ++ ++ P T + Y + RDP F + P W+ K
Sbjct: 403 PVVPVNSRVITDKEIEVGGFLFPKNTQFVLCHYVVSRDPSIFPEPDRF-QPQRWLRK 458
>ref|NP_999588.1| cytochrome P450 3A29 [Sus scrofa].
Length = 503
Score = 62.0 bits (149), Expect = 8e-10
Identities = 81/357 (22%), Positives = 143/357 (40%), Gaps = 26/357 (7%)
Frame = +1
Query: 469 FQKYGPIYREKLGNLESVYIIDPEDV-ALLFKFEGPNPERYNIPPWVAYHQHYQKPVGVL 645
FQ+YG ++ G + + DP + ++L K E Y+ V ++ P+G +
Sbjct: 65 FQQYGKMWGVYDGRQPLLAVTDPNMIKSVLVK------ECYS----VFTNRRSFGPLGAM 114
Query: 646 -----LKKSGAWKKDRLVLNTEVMAPEAIKNFIPLLDTVSQDFVGVLHRRIKQQ------ 792
L + WK+ R +L+ + + +K P++ V L + ++
Sbjct: 115 RNALSLAEDEEWKRIRTLLSPTFTSGK-LKEMFPIISHYGDLLVSNLRKEAEKGKPVTMK 173
Query: 793 ---GSGKFSAITNVIFGERLGMLEEIVDPEAQKFIDAV-YQMFHTSVPMLNLPPDLFRLF 960
G+ IT+ FG + L DP + + + F + L P L +F
Sbjct: 174 DIFGAYSMDVITSTAFGVNIDSLNNPQDPFVENSKKLLKFSFFDPFLLSLIFFPFLTPIF 233
Query: 961 RTKTWRDHVAAWDTIFNKAEKYTQNFYWDLRRKREFNNYPGILYRLLGNDK--------- 1113
+ F K+ K + ++KR + L +L+ N +
Sbjct: 234 EVLNITLFPKSSVNFFTKSVKRMKESRLTDQQKRRVD-----LLQLMINSQNSKEMDPHK 288
Query: 1114 -LLSEDVKANVTEMLAGGVDTTSMTLQWHLYEMARSLNVQEMLREEVLNARRQAQGDTSK 1290
L +E++ A + G +TTS L YE+A +VQ+ L+EE+ T
Sbjct: 289 SLSNEELVAQGIIFIFAGYETTSSALSLLAYELATHPDVQQKLQEEIEATFPNKAPPTYD 348
Query: 1291 MLQLVPLLKASIKETLRLHPISVTLQRYLVNDLGSRDYMIPAKTLVQVAVYAMGRDP 1461
L + L + ETLRL+PI+ L+R D+ +P T+V V V+ + RDP
Sbjct: 349 ALAQMEYLDMVVNETLRLYPIAARLERACKKDVEIHGVFVPKGTVVVVPVFVLHRDP 405
>ref|XP_003128078.2| PREDICTED: cytochrome P450 4A24-like [Sus scrofa].
Length = 504
Score = 60.1 bits (144), Expect = 3e-09
Identities = 81/388 (20%), Positives = 151/388 (38%), Gaps = 21/388 (5%)
Frame = +1
Query: 361 RPFSEIPSPGDNGWINLYRFWKEKGTQKIHYHHVQNFQKYGPIYREKLGNLESVYIIDPE 540
+ + PSP + R ++E+G Q+ + + R + G V + DP+
Sbjct: 40 KALQQFPSPPSHWLYGHSREFQEEGEQQSLLKRIGKYPS--ACARWRWGTRALVLVYDPD 97
Query: 541 DVALLFKFEGP-NPERYNIP-PWVAYHQHYQKPVGVLLKKSGAWKKDRLVLNTEVMAPEA 714
+ ++ P N Y + PW+ G+LL W + R +L T +
Sbjct: 98 YMKVVLARSDPKNSVVYRLLIPWIG--------CGLLLLNGQTWFQRRRML-TPAFHYDI 148
Query: 715 IKNFIPLLDTVSQDFVGVLHRRIKQQ------GSGKFSAITNVIFGERLGMLEEIVDPEA 876
+K ++ L+ Q + + + Q G + ++ D ++
Sbjct: 149 LKPYVGLMAKSVQVMLDKWEQLVAQDPRLEIVGPVSLMTLDTIMKCAFSHQGSTQTDGDS 208
Query: 877 QKFIDAVYQM---FHTSVPMLNLPPDLFRLFRTKTWRDHVAA------WDTIFN--KAEK 1023
+I A++ + F T L D+ + + H AA D + KA+
Sbjct: 209 HSYIQAIWDLKNLFSTRTKSAFLQNDIIYRLSPEGRKSHRAARIAHQHTDRVIQLRKAQL 268
Query: 1024 YTQNFYWDLRRKREFNNYPGILYRLLGNDKLLSE-DVKANVTEMLAGGVDTTSMTLQWHL 1200
Q ++R+KR + +L + LS+ D++A V + G DTT+ + W L
Sbjct: 269 QKQGEMENVRKKRHLDFLDILLLAQMEKGNSLSDTDLRAEVDTFMFEGHDTTASGISWIL 328
Query: 1201 YEMARSLNVQEMLREEVLNARRQAQGDTSKMLQLVPLLKASIKETLRLHPISVTLQRYLV 1380
Y +A Q+ REE+ T L +P IKE LRL+P ++ R L
Sbjct: 329 YALASHPEHQQRCREEIQGLLGDGTSITWDHLDQMPYTTMCIKEALRLYPPVPSVGRELS 388
Query: 1381 NDLGSRD-YMIPAKTLVQVAVYAMGRDP 1461
+ D +PA ++ +++Y + +P
Sbjct: 389 KPITFPDGRSLPAGIILSLSIYGLHHNP 416
>ref|XP_003128009.2| PREDICTED: cytochrome P450 2J2-like, partial [Sus scrofa].
Length = 432
Score = 59.3 bits (142), Expect = 6e-09
Identities = 82/352 (23%), Positives = 143/352 (40%), Gaps = 22/352 (6%)
Frame = +1
Query: 472 QKYGPIYREKLGNLESVYIIDPEDVALLFKFEGPNPERYNIPPWVAYHQHYQKPVGVLLK 651
+KYG ++ G L SV I + F + N ++ P V Q K GV++
Sbjct: 3 KKYGNVFSLDFGALSSVVITGLPFIKEAFVHQDKN---FSNRPIVPIQQRVFKDKGVVMS 59
Query: 652 KSGAWKKDRLVLNTEVMAPEAIKNF---IPLLDTVSQDFVGVLHRRIKQQGSGKFS---- 810
WK+ R T ++NF L+ Q+ L + I ++ F+
Sbjct: 60 NGQVWKEQRRFALT------TLRNFGLGKKSLEERIQEEAQYLIQAIGEENGQPFNPHFK 113
Query: 811 ---AITNVI----FGERLGMLEEIVDPEAQKFIDAVYQMFHTSV--PMLNLPPDLFRLFR 963
A++N+I FGER + E K +D V TSV + N+ P + + F
Sbjct: 114 INNAVSNIICSITFGERFDYQDNQFQ-ELLKLLDEV-MCLQTSVWCQIYNIIPWIMK-FL 170
Query: 964 TKTWRDHVAAWDTIFNKAEKYTQNFY--WDLRRKREF-NNYPGILYRLLGN--DKLLSED 1128
+ + W+ + +N W+ R+F Y + + G+ E+
Sbjct: 171 PGPHQTLFSNWEKLKMFVAHVIENHRRDWNPAEARDFIEAYLQEIEKHKGDATSSFQEEN 230
Query: 1129 VKANVTEMLAGGVDTTSMTLQWHLYEMARSLNVQEMLREEVLNARRQAQGDTSKMLQLVP 1308
+ + ++ G +TTS TL+W L MA +QE ++ E+ Q Q ++ + +P
Sbjct: 231 LICSTLDLFVAGTETTSTTLRWGLLYMALYPEIQEKVQAEIDRVLGQLQQPSTAARESMP 290
Query: 1309 LLKASIKETLRL-HPISVTLQRYLVNDLGSRDYMIPAKTLVQVAVYAMGRDP 1461
A I E R+ + I + + R + D Y +P T+V + A+ DP
Sbjct: 291 YTNAVIHEVQRMGNIIPLNVPREVAEDTTLAGYHLPKGTMVIANLTALHSDP 342
>ref|XP_003354175.1| PREDICTED: leukotriene-B(4) omega-hydroxylase 2-like, partial [Sus
scrofa].
Length = 308
Score = 58.9 bits (141), Expect = 7e-09
Identities = 45/146 (30%), Positives = 69/146 (47%), Gaps = 8/146 (5%)
Frame = +1
Query: 1048 LRRKREFNNYPGILYRLLGNDK----LLSEDVKANVTEMLAGGVDTTSMTLQWHLYEMAR 1215
LR K + I LL D+ L ED++A + G DTT+ L W LY +A+
Sbjct: 71 LRAKAKAKTLDFIDVLLLAKDEDGKGLSDEDIRAEADTFMFAGHDTTASGLSWVLYNLAK 130
Query: 1216 SLNVQEMLREEV---LNARRQAQGDTSKMLQLVPLLKASIKETLRLHPISVTLQRYLVND 1386
QE R+EV L R + + ++ QL P L IKE+LRLHP + R D
Sbjct: 131 HPEYQERCRQEVQELLRDREPKEIEWDELAQL-PFLTMCIKESLRLHPPVPGISRCCAQD 189
Query: 1387 LGSRD-YMIPAKTLVQVAVYAMGRDP 1461
+ D +IP + ++++ + +P
Sbjct: 190 VVLPDGRVIPKGNICVISIFGIHHNP 215
>ref|NP_999590.1| taurochenodeoxycholic 6 alpha-hydroxylase [Sus scrofa].
Length = 504
Score = 58.9 bits (141), Expect = 7e-09
Identities = 39/141 (27%), Positives = 70/141 (49%), Gaps = 2/141 (1%)
Frame = +1
Query: 1045 DLRRKREFNNYPGILYRLLGNDKLLSE-DVKANVTEMLAGGVDTTSMTLQWHLYEMARSL 1221
++++KR + +L+ + N LS+ DV+A V +A G D+T+ + W LY +A +
Sbjct: 276 NVKKKRHLDFLDILLFARMENGNSLSDTDVRAEVDTFMAAGHDSTASGISWVLYALASNP 335
Query: 1222 NVQEMLREEVLNARRQAQGDTSKMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLGSRD 1401
Q+ REE+ T L +P IKE LRL+P ++ R L + D
Sbjct: 336 EHQQRCREEIQGLLGDGTSITWDHLDQMPYTTMCIKEALRLYPPVPSVGRELSKPITFPD 395
Query: 1402 -YMIPAKTLVQVAVYAMGRDP 1461
+PA ++ +++Y + +P
Sbjct: 396 GRSLPAGIILSLSIYGLHHNP 416
>ref|XP_003127953.1| PREDICTED: cytochrome P450 4A11-like [Sus scrofa].
Length = 510
Score = 58.2 bits (139), Expect = 1e-08
Identities = 80/356 (22%), Positives = 141/356 (39%), Gaps = 22/356 (6%)
Frame = +1
Query: 460 VQNFQKYGPIYREKLGNLESVYIIDPEDVALLFKFEGPNPERYN--IPPWVAYHQHYQKP 633
V+NF + P + GN + I DP+ + ++ P + + PW+ Y
Sbjct: 79 VKNFPRACPYWL--WGNKAHLVIYDPDYMKVVLGRSDPKLTDVHKFLSPWIGY------- 129
Query: 634 VGVLLKKSGAWKKDRLVLNTEVMAPEAIKNFIPLLDTVSQDFVGVLHRRIKQQGS----G 801
G+LL W + R +L T + +K ++ L+ + + + + Q G
Sbjct: 130 -GLLLSDGQTWFQHRRML-TPAFHYDILKPYVNLMADSVKVMLDKWEQLVTQDSHLEIFG 187
Query: 802 KFSAIT-NVIFGERLGMLEEI-VDPEAQKFIDAVYQMFHTSVPMLN-----------LPP 942
S +T + + + D + +I AV + V L L P
Sbjct: 188 HVSLMTLDTVMKCAFSYQGSVQTDRNSHSYIQAVGNLNSLFVARLRSALYQNDIIYRLSP 247
Query: 943 DLFRLFRTKTWRDHVAAWDTI-FNKAEKYTQNFYWDLRRKREFNNYPGILYRLLGNDKLL 1119
+ RL R H I KA + +LR+KR + +L+ + N L
Sbjct: 248 E-GRLSRQACQLAHQHTDQVIRLRKAHLQKEGEMENLRKKRHLDFLDILLFARMENGSSL 306
Query: 1120 SE-DVKANVTEMLAGGVDTTSMTLQWHLYEMARSLNVQEMLREEVLNARRQAQGDTSKML 1296
S+ D++A V + G DTT+ + W Y +A Q+ REE+ + T L
Sbjct: 307 SDTDLRAEVDTFMFEGHDTTASGISWIFYALASHPEYQQRCREEIRSLLGDGTSITWDHL 366
Query: 1297 QLVPLLKASIKETLRLHPISVTLQRYLVNDLGSRD-YMIPAKTLVQVAVYAMGRDP 1461
+P IKE +RL+P + R L + D +PA ++ +++YA+ +P
Sbjct: 367 GQMPYTTMCIKEAMRLYPPVPAIIRELSKPITFPDGRSLPAGIIISLSIYALHHNP 422
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 38,455,743
Number of extensions: 1422947
Number of successful extensions: 3966
Number of sequences better than 1.0e-05: 24
Number of HSP's gapped: 3944
Number of HSP's successfully gapped: 24
Length of query: 505
Length of database: 11,343,932
Length adjustment: 103
Effective length of query: 402
Effective length of database: 8,779,541
Effective search space: 3529375482
Effective search space used: 3529375482
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-006985
(1517 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|GL892482.1| Sus scrofa unplaced genomic scaffold chrU_scaffol... 658 0.0
gb|GL893363.2| Sus scrofa unplaced genomic scaffold ChrUScaf1248 410 e-112
>gb|GL892482.1| Sus scrofa unplaced genomic scaffold chrU_scaffold1342
Length = 117911
Score = 658 bits (332), Expect = 0.0
Identities = 332/332 (100%)
Strand = Plus / Plus
Query: 164 agactcacctcatcaggccctgctgcagtgggagcagggagagtagcagtggtaggggca 223
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 112571 agactcacctcatcaggccctgctgcagtgggagcagggagagtagcagtggtaggggca 112630
Query: 224 gcatgctggccagggggcttgccctccgctcagtcctggtcaaaggctgccagcccttcc 283
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 112631 gcatgctggccagggggcttgccctccgctcagtcctggtcaaaggctgccagcccttcc 112690
Query: 284 tgagtgcccctcgggagtgcccagggcatcccagggtgggcactggagagggagcatgca 343
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 112691 tgagtgcccctcgggagtgcccagggcatcccagggtgggcactggagagggagcatgca 112750
Query: 344 tctccactaaaacccctcgccccttcagtgagatcccctctcctggtgacaatggctgga 403
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 112751 tctccactaaaacccctcgccccttcagtgagatcccctctcctggtgacaatggctgga 112810
Query: 404 ttaacctgtaccgtttctggaaggagaagggcacacagaaaatccactatcaccatgtcc 463
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 112811 ttaacctgtaccgtttctggaaggagaagggcacacagaaaatccactatcaccatgtcc 112870
Query: 464 agaacttccagaagtatggtcccatttacagg 495
||||||||||||||||||||||||||||||||
Sbjct: 112871 agaacttccagaagtatggtcccatttacagg 112902
Score = 317 bits (160), Expect = 1e-83
Identities = 160/160 (100%)
Strand = Plus / Plus
Query: 492 cagggagaagctcggcaacttggaatctgtttatatcatcgaccctgaagatgtggccct 551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116234 cagggagaagctcggcaacttggaatctgtttatatcatcgaccctgaagatgtggccct 116293
Query: 552 tctctttaagttcgaaggacccaacccagaacgatacaacatcccgccctgggttgccta 611
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116294 tctctttaagttcgaaggacccaacccagaacgatacaacatcccgccctgggttgccta 116353
Query: 612 tcaccagcattaccagaagcctgttggggtcctgctgaag 651
||||||||||||||||||||||||||||||||||||||||
Sbjct: 116354 tcaccagcattaccagaagcctgttggggtcctgctgaag 116393
>gb|GL893363.2| Sus scrofa unplaced genomic scaffold ChrUScaf1248
Length = 166125
Score = 410 bits (207), Expect = e-112
Identities = 207/207 (100%)
Strand = Plus / Minus
Query: 809 cagccatcaccaatgtcatatttggagagcgcctggggatgctggaggaaatagtggacc 868
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 164811 cagccatcaccaatgtcatatttggagagcgcctggggatgctggaggaaatagtggacc 164752
Query: 869 ctgaggctcagaagttcattgatgctgtctaccagatgttccacactagtgtccccatgc 928
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 164751 ctgaggctcagaagttcattgatgctgtctaccagatgttccacactagtgtccccatgc 164692
Query: 929 tcaatctcccccctgacctgttccgtctgttcaggaccaagacctggagggaccatgtag 988
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 164691 tcaatctcccccctgacctgttccgtctgttcaggaccaagacctggagggaccatgtag 164632
Query: 989 ccgcatgggacactattttcaataaag 1015
|||||||||||||||||||||||||||
Sbjct: 164631 ccgcatgggacactattttcaataaag 164605
Score = 333 bits (168), Expect = 2e-88
Identities = 168/168 (100%)
Strand = Plus / Minus
Query: 1173 gacatccatgactctgcaatggcacttgtatgagatggcacgtagcctgaatgtgcagga 1232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160913 gacatccatgactctgcaatggcacttgtatgagatggcacgtagcctgaatgtgcagga 160854
Query: 1233 gatgctgcgggaggaggtcctcaatgcccggcgccaggcccaaggagacacaagcaagat 1292
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160853 gatgctgcgggaggaggtcctcaatgcccggcgccaggcccaaggagacacaagcaagat 160794
Query: 1293 gctgcaattggtcccactcctcaaagctagcattaaggagacactgag 1340
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160793 gctgcaattggtcccactcctcaaagctagcattaaggagacactgag 160746
Score = 319 bits (161), Expect = 3e-84
Identities = 161/161 (100%)
Strand = Plus / Minus
Query: 651 gaagtcaggagcctggaagaaagaccggttggtcctgaacacggaggtaatggctccaga 710
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165950 gaagtcaggagcctggaagaaagaccggttggtcctgaacacggaggtaatggctccaga 165891
Query: 711 ggccataaagaacttcatccccctactggacacagtgtctcaggacttcgtcggcgtcct 770
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165890 ggccataaagaacttcatccccctactggacacagtgtctcaggacttcgtcggcgtcct 165831
Query: 771 gcacaggcgcatcaagcagcagggttctggaaagttctcag 811
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 165830 gcacaggcgcatcaagcagcagggttctggaaagttctcag 165790
Score = 317 bits (160), Expect = 1e-83
Identities = 160/160 (100%)
Strand = Plus / Minus
Query: 1014 agctgaaaaatacacccagaacttctactgggacctgagacggaaaagagaatttaacaa 1073
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163828 agctgaaaaatacacccagaacttctactgggacctgagacggaaaagagaatttaacaa 163769
Query: 1074 ttacccaggcatcctctaccgcctcctgggaaatgacaagctgctctcagaagatgttaa 1133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163768 ttacccaggcatcctctaccgcctcctgggaaatgacaagctgctctcagaagatgttaa 163709
Query: 1134 ggccaatgttaccgagatgctggcagggggtgtagacacg 1173
||||||||||||||||||||||||||||||||||||||||
Sbjct: 163708 ggccaatgttaccgagatgctggcagggggtgtagacacg 163669
Score = 129 bits (65), Expect = 5e-27
Identities = 77/81 (95%)
Strand = Plus / Minus
Query: 1339 agactccaccccatctccgtgaccctgcagagatacctcgtgaatgacttggggtctcga 1398
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 160394 agactccaccccatctccgtgaccctgcagagatacctcgtgaatgacttggttcttcga 160335
Query: 1399 gattacatgattcctgccaag 1419
|||||||||||||||||||||
Sbjct: 160334 gattacatgattcctgccaag 160314
Score = 91.7 bits (46), Expect = 1e-15
Identities = 85/101 (84%), Gaps = 1/101 (0%)
Strand = Plus / Minus
Query: 1418 agacattggtacaagtggccgtctatgccatgggccgagannnnnnnttcttctcaaaat 1477
|||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 159784 agacattggtacaagtggccgtctatgccatgggccgagaccccgccttcttctcaaatc 159725
Query: 1478 cagnc-agtttgacccanccnngtggntgggtaangaaagg 1517
||| | ||||||||||| || |||| ||||||| ||||||
Sbjct: 159724 caggccagtttgacccaacccggtggttgggtaaagaaagg 159684
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 36,690,411
Number of extensions: 275
Number of successful extensions: 275
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 274
Number of HSP's successfully gapped: 8
Length of query: 1517
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1496
Effective length of database: 2,808,413,156
Effective search space: 4201386081376
Effective search space used: 4201386081376
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)