Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-006990
(1427 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_788817.1| cholesterol side-chain cleavage enzyme, mitocho... 738 0.0
Alignment gi|NP_777063.2| cytochrome P450 11B1, mitochondrial precursor [... 308 8e-84
Alignment gi|NP_001179213.1| 25-hydroxyvitamin D-1 alpha hydroxylase, mit... 213 3e-55
Alignment gi|XP_002687602.1| PREDICTED: cytochrome P450, family 27, subfa... 213 3e-55
Alignment gi|XP_002692552.1| PREDICTED: cytochrome P450, family 24, subfa... 202 6e-52
Alignment gi|XP_002685263.1| PREDICTED: FLJ16008 protein-like [Bos taurus]. 202 6e-52
Alignment gi|XP_874669.3| PREDICTED: FLJ16008 protein-like [Bos taurus]. 202 6e-52
Alignment gi|XP_591370.3| PREDICTED: cytochrome P450, family 24, subfamil... 201 1e-51
Alignment gi|NP_001076882.1| sterol 26-hydroxylase, mitochondrial [Bos ta... 196 4e-50
Alignment gi|XP_002692553.1| PREDICTED: cytochrome P450, family 24, subfa... 152 9e-37
>ref|NP_788817.1| cholesterol side-chain cleavage enzyme, mitochondrial precursor [Bos
taurus].
Length = 520
Score = 738 bits (1905), Expect = 0.0
Identities = 357/417 (85%), Positives = 391/417 (93%)
Frame = +3
Query: 6 PEDVALLFKFEGPNPERYNIPPWVAYHQHYQKPVGVLLKKSGAWKKDRLVLNTEVMAPEA 185
PEDVA LFKFEG PERY+IPPW+AYH++YQKP+GVL KKSG WKKDR+VLNTEVMAPEA
Sbjct: 104 PEDVAHLFKFEGSYPERYDIPPWLAYHRYYQKPIGVLFKKSGTWKKDRVVLNTEVMAPEA 163
Query: 186 IKNFIPLLDTVSQDFVGVLHRRIKQQGSGKFSGDIREDLFRFAFESITNVIFGERLGMLE 365
IKNFIPLL+ VSQDFV +LH+RIKQQGSGKF GDI+EDLF FAFESITNV+FGERLGMLE
Sbjct: 164 IKNFIPLLNPVSQDFVSLLHKRIKQQGSGKFVGDIKEDLFHFAFESITNVMFGERLGMLE 223
Query: 366 EIVDPEAQKFIDAVYQMFHTSVPMLNLPPDLFRLFRTKTWRDHVAAWDTIFNKAEKYTQN 545
E V+PEAQKFIDAVY+MFHTSVP+LN+PP+L+RLFRTKTWRDHVAAWDTIFNKAEKYT+
Sbjct: 224 ETVNPEAQKFIDAVYKMFHTSVPLLNVPPELYRLFRTKTWRDHVAAWDTIFNKAEKYTEI 283
Query: 546 FYWDLRRKREFNNYPGILYRLLGNDKLLSEDVKANVTEMLAGGVDTTSMTLQWHLYEMAR 725
FY DLRRK EF NYPGILY LL ++K+L EDVKAN+TEMLAGGV+TTSMTLQWHLYEMAR
Sbjct: 284 FYQDLRRKTEFRNYPGILYCLLKSEKMLLEDVKANITEMLAGGVNTTSMTLQWHLYEMAR 343
Query: 726 SLNVQEMLREEVLNARRQAQGDTSKMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVL 905
SLNVQEMLREEVLNARRQA+GD SKMLQ+VPLLKASIKETLRLHPISVTLQRY +DLVL
Sbjct: 344 SLNVQEMLREEVLNARRQAEGDISKMLQMVPLLKASIKETLRLHPISVTLQRYPESDLVL 403
Query: 906 RDYMIPAKTLVQVAVYAMGRDPAFFSNPGQFDPTRWLGKERDLIHFRNLGFGWGVRQCVG 1085
+DY+IPAKTLVQVA+YAMGRDPAFFS+P +FDPTRWL K++DLIHFRNLGFGWGVRQCVG
Sbjct: 404 QDYLIPAKTLVQVAIYAMGRDPAFFSSPDKFDPTRWLSKDKDLIHFRNLGFGWGVRQCVG 463
Query: 1086 RRIAELEMTLFLIHILENFKVELQHFSDVDTIFNLILMPDKPIFLVFRPFNQDPLQA 1256
RRIAELEMTLFLIHILENFKVE+QH DVDTIFNLIL PDKPIFLVFRPFNQDP QA
Sbjct: 464 RRIAELEMTLFLIHILENFKVEMQHIGDVDTIFNLILTPDKPIFLVFRPFNQDPPQA 520
>ref|NP_777063.2| cytochrome P450 11B1, mitochondrial precursor [Bos taurus].
Length = 503
Score = 308 bits (789), Expect = 8e-84
Identities = 161/408 (39%), Positives = 247/408 (60%)
Frame = +3
Query: 6 PEDVALLFKFEGPNPERYNIPPWVAYHQHYQKPVGVLLKKSGAWKKDRLVLNTEVMAPEA 185
PEDV L + + +P+R + PW+AY Q GV L W+ DRL LN +V++ A
Sbjct: 94 PEDVERLQQADSHHPQRMILEPWLAYRQARGHKCGVFLLNGPQWRLDRLRLNPDVLSLPA 153
Query: 186 IKNFIPLLDTVSQDFVGVLHRRIKQQGSGKFSGDIREDLFRFAFESITNVIFGERLGMLE 365
++ + PL+D V++DF L R+ Q G + R LFR+ E+ T V++GERLG+L
Sbjct: 154 LQKYTPLVDGVARDFSQTLKARVLQNARGSLTLGHRAQLFRYTIEASTLVLYGERLGLLT 213
Query: 366 EIVDPEAQKFIDAVYQMFHTSVPMLNLPPDLFRLFRTKTWRDHVAAWDTIFNKAEKYTQN 545
+ +P++ FI A+ M ++V ++ +P L R T WR+H AWD IF A + Q
Sbjct: 214 QQPNPDSLNFIHALEAMLKSTVQLMFVPRRLSRWMSTNMWREHFEAWDYIFQYANRAIQR 273
Query: 546 FYWDLRRKREFNNYPGILYRLLGNDKLLSEDVKANVTEMLAGGVDTTSMTLQWHLYEMAR 725
Y +L ++ Y GI+ LL + + +KAN ++ AG VDTT+ L L+E+AR
Sbjct: 274 IYQELALGHPWH-YSGIVAELLMRADMTLDTIKANTIDLTAGSVDTTAFPLLMTLFELAR 332
Query: 726 SLNVQEMLREEVLNARRQAQGDTSKMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVL 905
+ VQ+ +R+E L A + + + + +PLL+A++KETLRL+P+ +TL+R + +DLVL
Sbjct: 333 NPEVQQAVRQESLVAEARISENPQRAITELPLLRAALKETLRLYPVGITLEREVSSDLVL 392
Query: 906 RDYMIPAKTLVQVAVYAMGRDPAFFSNPGQFDPTRWLGKERDLIHFRNLGFGWGVRQCVG 1085
++Y IPA TLV+V +Y++GR+PA F+ P + P RWL ++ F +L FG+GVRQC+G
Sbjct: 393 QNYHIPAGTLVKVLLYSLGRNPAVFARPESYHPQRWLDRQGSGSRFPHLAFGFGVRQCLG 452
Query: 1086 RRIAELEMTLFLIHILENFKVELQHFSDVDTIFNLILMPDKPIFLVFR 1229
RR+AE+EM L L H+L+NF VE D+ ++ ILMP FR
Sbjct: 453 RRVAEVEMLLLLHHVLKNFLVETLEQEDIKMVYRFILMPSTLPLFTFR 500
>ref|NP_001179213.1| 25-hydroxyvitamin D-1 alpha hydroxylase, mitochondrial [Bos taurus].
Length = 508
Score = 213 bits (542), Expect = 3e-55
Identities = 147/420 (35%), Positives = 220/420 (52%), Gaps = 13/420 (3%)
Frame = +3
Query: 6 PEDVALLFKFEGPNPERYNIPPWVAYHQHYQKPVGVLLKKSGAWKKDRLVLNTEVMAPEA 185
P V L + EGP PER + PW + + Q+ G+L + W++ R +L ++ P+A
Sbjct: 90 PTLVEQLLRQEGPRPERCSFSPWTEHRRRRQRACGLLTAEGEEWQRLRSLLAPLLLRPQA 149
Query: 186 IKNFIPLLDTVSQDFVGVLHRRIKQQGSGKFS--GDIREDLFRFAFESITNVIFGERLGM 359
+ L V +D V L RR + G+G S D+ + ++F E I V+ G RLG
Sbjct: 150 AARYAGTLHGVVRDLVRRL-RRQRGLGAGPPSLVRDVAGEFYKFGLEGIAAVLLGSRLGC 208
Query: 360 LEEIVDPEAQKFIDAVYQMFHTSVPMLNLPPDLFRLFRTKTWRDHVAAWDTIFNKAEKYT 539
LE V P+ + FI AV +F +++ + +P L R+ W WD +F A+++
Sbjct: 209 LEAEVPPDTETFIRAVGSVFVSTLLTMAMPSWLHRVV-PGPWDRLCRDWDQMFAFAQQHV 267
Query: 540 QNFYWDLR-----RKREFNNYPG--ILYRLLGNDKLLSEDVKANVTEMLAGGVDTTSMTL 698
+ ++ K E + PG + Y LL + L + + NVTE+L GVDT S TL
Sbjct: 268 EQREAEVAMRNQSEKSEEDMGPGAHLTYFLLQKE-LPAASILGNVTELLLAGVDTVSNTL 326
Query: 699 QWHLYEMARSLNVQEMLREEV---LNARRQAQGDTSKMLQLVPLLKASIKETLRLHPISV 869
W LYE++R +Q L E+ L Q + + QL PLLKA +KE LRL+P+
Sbjct: 327 SWALYELSRHPEIQTALHAEITAALGPGSSTQPSATALSQL-PLLKAVVKEVLRLYPVVP 385
Query: 870 TLQRYLVNDLVLRDYMIPAKTLVQVAVYAMGRDPAFFSNPGQFDPTRWLGKERDLIHFRN 1049
R D+ + +Y+IP TLV + YA RDPA F P F P RWLG+ F +
Sbjct: 386 GNSRVPDRDICVGEYIIPKNTLVTLCHYATSRDPAQFPEPNSFRPARWLGEGPAPHPFAS 445
Query: 1050 LGFGWGVRQCVGRRIAELEMTLFLIHILENFKVELQHFS-DVDTIFNLILMPDKPIFLVF 1226
L FG+G R CVGRR+AELE+ + L IL +F+V+ + S V + +L+P++ I L F
Sbjct: 446 LPFGFGKRSCVGRRLAELELQMALAQILIHFEVQPEPGSAPVRPMTRTVLVPERSINLQF 505
>ref|XP_002687602.1| PREDICTED: cytochrome P450, family 27, subfamily B, polypeptide 1
[Bos taurus].
Length = 508
Score = 213 bits (542), Expect = 3e-55
Identities = 147/420 (35%), Positives = 220/420 (52%), Gaps = 13/420 (3%)
Frame = +3
Query: 6 PEDVALLFKFEGPNPERYNIPPWVAYHQHYQKPVGVLLKKSGAWKKDRLVLNTEVMAPEA 185
P V L + EGP PER + PW + + Q+ G+L + W++ R +L ++ P+A
Sbjct: 90 PTLVEQLLRQEGPRPERCSFSPWTEHRRRRQRACGLLTAEGEEWQRLRSLLAPLLLRPQA 149
Query: 186 IKNFIPLLDTVSQDFVGVLHRRIKQQGSGKFS--GDIREDLFRFAFESITNVIFGERLGM 359
+ L V +D V L RR + G+G S D+ + ++F E I V+ G RLG
Sbjct: 150 AARYAGTLHGVVRDLVRRL-RRQRGLGAGPPSLVRDVAGEFYKFGLEGIAAVLLGSRLGC 208
Query: 360 LEEIVDPEAQKFIDAVYQMFHTSVPMLNLPPDLFRLFRTKTWRDHVAAWDTIFNKAEKYT 539
LE V P+ + FI AV +F +++ + +P L R+ W WD +F A+++
Sbjct: 209 LEAEVPPDTETFIRAVGSVFVSTLLTMAMPSWLHRVV-PGPWDRLCRDWDQMFAFAQQHV 267
Query: 540 QNFYWDLR-----RKREFNNYPG--ILYRLLGNDKLLSEDVKANVTEMLAGGVDTTSMTL 698
+ ++ K E + PG + Y LL + L + + NVTE+L GVDT S TL
Sbjct: 268 EQREAEVAMRNQSEKSEEDMGPGAHLTYFLLQKE-LPAASILGNVTELLLAGVDTVSNTL 326
Query: 699 QWHLYEMARSLNVQEMLREEV---LNARRQAQGDTSKMLQLVPLLKASIKETLRLHPISV 869
W LYE++R +Q L E+ L Q + + QL PLLKA +KE LRL+P+
Sbjct: 327 SWALYELSRHPEIQTALHAEITAALGPGSSTQPSATALSQL-PLLKAVVKEVLRLYPVVP 385
Query: 870 TLQRYLVNDLVLRDYMIPAKTLVQVAVYAMGRDPAFFSNPGQFDPTRWLGKERDLIHFRN 1049
R D+ + +Y+IP TLV + YA RDPA F P F P RWLG+ F +
Sbjct: 386 GNSRVPDRDICVGEYIIPKNTLVTLCHYATSRDPAQFPEPNSFRPARWLGEGPAPHPFAS 445
Query: 1050 LGFGWGVRQCVGRRIAELEMTLFLIHILENFKVELQHFS-DVDTIFNLILMPDKPIFLVF 1226
L FG+G R CVGRR+AELE+ + L IL +F+V+ + S V + +L+P++ I L F
Sbjct: 446 LPFGFGKRSCVGRRLAELELQMALAQILIHFEVQPEPGSAPVRPMTRTVLVPERSINLQF 505
>ref|XP_002692552.1| PREDICTED: cytochrome P450, family 24, subfamily A, polypeptide
1-like isoform 1 [Bos taurus].
Length = 514
Score = 202 bits (514), Expect = 6e-52
Identities = 121/403 (30%), Positives = 213/403 (52%), Gaps = 2/403 (0%)
Frame = +3
Query: 24 LFKFEGPNPERYNIPPWVAYHQHYQKPVGVLLKKSGAWKKDRLVLNTEVMAPEAIKNFIP 203
L++ E +P+R I PW AY + ++ G+L+ + W++ R ++M P I
Sbjct: 118 LYRTESAHPQRLEIKPWKAYRDYREEGYGLLILEGEDWQRVRSAFQKKLMKPVEIMKLDD 177
Query: 204 LLDTVSQDFVGVLHRRIKQQGSGKFSGDIREDLFRFAFESITNVIFGERLGMLEEIVDPE 383
++ V DF+G + ++G + D+ +L +++FESI V++ +R G+L++ E
Sbjct: 178 KINEVLADFMGRIDELCDERGRIE---DLYTELNKWSFESICLVLYEKRFGLLQKNAGEE 234
Query: 384 AQKFIDAVYQMFHTSVPMLNLPPDLFRLFRTKTWRDHVAAWDTIFNKAEKYTQNFYWDLR 563
A FI AV M M+ P +L R T+ W+ H AWDTIF + N
Sbjct: 235 ALNFIMAVKTMMSMFGKMMVTPVELHRSLNTRVWQAHTQAWDTIFRSVKSCVDN------ 288
Query: 564 RKREFNNYPGI--LYRLLGNDKLLSEDVKANVTEMLAGGVDTTSMTLQWHLYEMARSLNV 737
R +++ P + L + +++L +++ A VTE+ V+TT+ +L W LY ++R+ +V
Sbjct: 289 RLEKYSEQPSMDFLCDIYHHNQLSKKELYAAVTELQLAAVETTANSLMWILYNLSRNPHV 348
Query: 738 QEMLREEVLNARRQAQGDTSKMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDYM 917
Q+ L +E+ + + Q ++ L+ +P LKA +KE++RL+P R L +VL +Y
Sbjct: 349 QQKLFKEIQSVLPENQLPRAEDLRNMPYLKACLKESMRLNPTVPFTTRTLDKAMVLGEYA 408
Query: 918 IPAKTLVQVAVYAMGRDPAFFSNPGQFDPTRWLGKERDLIHFRNLGFGWGVRQCVGRRIA 1097
+P T++ + + +G F QF P RWL ++ + F +L FG G R CVGRR+A
Sbjct: 409 LPKGTVLVLNTHVLGSSEENFEESSQFRPERWLQDKKKISPFAHLPFGVGKRMCVGRRLA 468
Query: 1098 ELEMTLFLIHILENFKVELQHFSDVDTIFNLILMPDKPIFLVF 1226
EL++ L L I+ + V V+T+ L+P + + + F
Sbjct: 469 ELQLHLALCWIVRKYDVVATDLEPVETLHLGNLVPGRQLPVAF 511
>ref|XP_002685263.1| PREDICTED: FLJ16008 protein-like [Bos taurus].
Length = 537
Score = 202 bits (514), Expect = 6e-52
Identities = 127/415 (30%), Positives = 214/415 (51%), Gaps = 7/415 (1%)
Frame = +3
Query: 3 DPEDVALLFKFEGPNPERYNIPPWVAYHQHYQKPVGVLLKKSGAWKKDRLVLNTEVMAPE 182
D + VA + + EG +P+R N+ W Y + G++ + W K R VL ++ P+
Sbjct: 119 DRDLVAQVLRAEGASPQRANMGSWQEYRDLRGRSTGLISAEGEQWLKMRSVLRQRILKPK 178
Query: 183 AIKNFIPLLDTVSQDFVGVLHRRIKQQGSGKFSGDIREDLFRFAFESITNVIFGERLGML 362
+ F ++ V D + ++ Q G +I + F+++ E + +++ RLG L
Sbjct: 179 DVAIFAGEINQVIADLIKRIYFLKSQAEDGDTVTNINDLFFKYSMEGVATILYESRLGCL 238
Query: 363 EEIVDPEAQKFIDAVYQMFHTSVPML--NLPPDLFRLFRTKTWRDHVAAWDTIFNKAEKY 536
+ +I+A+ MF T + P RL K W++ +WD +F ++ +
Sbjct: 239 GNSIPQLTADYIEALALMFCTFKTSMYAGAIPRWLRLLIPKPWQEFCRSWDGLFEFSQIH 298
Query: 537 TQNFYWDLRRKREFNNYP--GILYRLLGNDKLLSEDVKANVTEMLAGGVDTTSMTLQWHL 710
N D+R + E G+L L + +L E++ AN+TEML GVDTTS TL W +
Sbjct: 299 VDNKLRDIRCQMERGERVRGGLLTYLFLSQELTLEEIYANMTEMLLAGVDTTSFTLSWAV 358
Query: 711 YEMARSLNVQEMLREEVLNARRQAQGDTSKMLQLVPLLKASIKETLRLHPISVTLQRYLV 890
Y +AR VQ+ L E++ + T+ + VPL++A +KETLRL P+ R
Sbjct: 359 YLLARHPEVQQALYREIVRNLGERHVPTAADVPKVPLVRALLKETLRLFPVLPGNGRVTQ 418
Query: 891 NDLVLRDYMIPAKTLVQVAVYAMGRDPAFFSNPGQFDPTRWL--GKERDLIHFRNLGFGW 1064
DL++ Y+IP T + + YA + F +F P RWL G R + +F ++ FG+
Sbjct: 419 EDLIVGGYLIPRGTQLALCHYATSYEDENFPRAKEFRPERWLRQGNLRRVDNFGSIPFGY 478
Query: 1065 GVRQCVGRRIAELEMTLFLIHILENFKVELQHFS-DVDTIFNLILMPDKPIFLVF 1226
G R C+GRRIAELE+ L +I +L++F+++ ++ V + +LMP +PI + F
Sbjct: 479 GARSCIGRRIAELEIHLLVIQLLQHFEIKTSPWTKTVHAKTHGLLMPGEPIHVRF 533
>ref|XP_874669.3| PREDICTED: FLJ16008 protein-like [Bos taurus].
Length = 537
Score = 202 bits (514), Expect = 6e-52
Identities = 127/415 (30%), Positives = 214/415 (51%), Gaps = 7/415 (1%)
Frame = +3
Query: 3 DPEDVALLFKFEGPNPERYNIPPWVAYHQHYQKPVGVLLKKSGAWKKDRLVLNTEVMAPE 182
D + VA + + EG +P+R N+ W Y + G++ + W K R VL ++ P+
Sbjct: 119 DRDLVAQVLRAEGASPQRANMGSWQEYRDLRGRSTGLISAEGEQWLKMRSVLRQRILKPK 178
Query: 183 AIKNFIPLLDTVSQDFVGVLHRRIKQQGSGKFSGDIREDLFRFAFESITNVIFGERLGML 362
+ F ++ V D + ++ Q G +I + F+++ E + +++ RLG L
Sbjct: 179 DVAIFAGEINQVIADLIKRIYFLKSQAEDGDTVTNINDLFFKYSMEGVATILYESRLGCL 238
Query: 363 EEIVDPEAQKFIDAVYQMFHTSVPML--NLPPDLFRLFRTKTWRDHVAAWDTIFNKAEKY 536
+ +I+A+ MF T + P RL K W++ +WD +F ++ +
Sbjct: 239 GNSIPQLTADYIEALALMFCTFKTSMYAGAIPRWLRLLIPKPWQEFCRSWDGLFEFSQIH 298
Query: 537 TQNFYWDLRRKREFNNYP--GILYRLLGNDKLLSEDVKANVTEMLAGGVDTTSMTLQWHL 710
N D+R + E G+L L + +L E++ AN+TEML GVDTTS TL W +
Sbjct: 299 VDNKLRDIRCQMERGERVRGGLLTYLFLSQELTLEEIYANMTEMLLAGVDTTSFTLSWAV 358
Query: 711 YEMARSLNVQEMLREEVLNARRQAQGDTSKMLQLVPLLKASIKETLRLHPISVTLQRYLV 890
Y +AR VQ+ L E++ + T+ + VPL++A +KETLRL P+ R
Sbjct: 359 YLLARHPEVQQALYREIVRNLGERHVPTAADVPKVPLVRALLKETLRLFPVLPGNGRVTQ 418
Query: 891 NDLVLRDYMIPAKTLVQVAVYAMGRDPAFFSNPGQFDPTRWL--GKERDLIHFRNLGFGW 1064
DL++ Y+IP T + + YA + F +F P RWL G R + +F ++ FG+
Sbjct: 419 EDLIVGGYLIPRGTQLALCHYATSYEDENFPRAKEFRPERWLRQGNLRRVDNFGSIPFGY 478
Query: 1065 GVRQCVGRRIAELEMTLFLIHILENFKVELQHFS-DVDTIFNLILMPDKPIFLVF 1226
G R C+GRRIAELE+ L +I +L++F+++ ++ V + +LMP +PI + F
Sbjct: 479 GARSCIGRRIAELEIHLLVIQLLQHFEIKTSPWTKTVHAKTHGLLMPGEPIHVRF 533
>ref|XP_591370.3| PREDICTED: cytochrome P450, family 24, subfamily A, polypeptide
1-like isoform 2 [Bos taurus].
Length = 514
Score = 201 bits (512), Expect = 1e-51
Identities = 121/403 (30%), Positives = 213/403 (52%), Gaps = 2/403 (0%)
Frame = +3
Query: 24 LFKFEGPNPERYNIPPWVAYHQHYQKPVGVLLKKSGAWKKDRLVLNTEVMAPEAIKNFIP 203
L++ E +P+R I PW AY + ++ G+L+ + W++ R ++M P I
Sbjct: 118 LYRTESAHPQRLEIKPWKAYRDYREEGYGLLILEGEDWQRVRSAFPKKLMKPVEIMKLDD 177
Query: 204 LLDTVSQDFVGVLHRRIKQQGSGKFSGDIREDLFRFAFESITNVIFGERLGMLEEIVDPE 383
++ V DF+G + ++G + D+ +L +++FESI V++ +R G+L++ E
Sbjct: 178 KINEVLADFMGRIDELCDERGRIE---DLYTELNKWSFESICLVLYEKRFGLLQKNAGEE 234
Query: 384 AQKFIDAVYQMFHTSVPMLNLPPDLFRLFRTKTWRDHVAAWDTIFNKAEKYTQNFYWDLR 563
A FI AV M M+ P +L R T+ W+ H AWDTIF + N
Sbjct: 235 ALNFIMAVKTMMSMFGKMMVTPVELHRSLNTRVWQAHTQAWDTIFRSVKSCVDN------ 288
Query: 564 RKREFNNYPGI--LYRLLGNDKLLSEDVKANVTEMLAGGVDTTSMTLQWHLYEMARSLNV 737
R +++ P + L + +++L +++ A VTE+ V+TT+ +L W LY ++R+ +V
Sbjct: 289 RLEKYSEQPSMDFLCDIYHHNQLSKKELYAAVTELQLAAVETTANSLMWILYNLSRNPHV 348
Query: 738 QEMLREEVLNARRQAQGDTSKMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDYM 917
Q+ L +E+ + + Q ++ L+ +P LKA +KE++RL+P R L +VL +Y
Sbjct: 349 QQKLFKEIQSVLPENQLPRAEDLRNMPYLKACLKESMRLNPTVPFTTRTLDKAMVLGEYA 408
Query: 918 IPAKTLVQVAVYAMGRDPAFFSNPGQFDPTRWLGKERDLIHFRNLGFGWGVRQCVGRRIA 1097
+P T++ + + +G F QF P RWL ++ + F +L FG G R CVGRR+A
Sbjct: 409 LPKGTVLVLNTHVLGSSEENFEESSQFRPERWLQDKKKISPFAHLPFGVGKRMCVGRRLA 468
Query: 1098 ELEMTLFLIHILENFKVELQHFSDVDTIFNLILMPDKPIFLVF 1226
EL++ L L I+ + V V+T+ L+P + + + F
Sbjct: 469 ELQLHLALCWIVRKYDVVATDLEPVETLHLGNLVPGRQLPVAF 511
>ref|NP_001076882.1| sterol 26-hydroxylase, mitochondrial [Bos taurus].
Length = 534
Score = 196 bits (498), Expect = 4e-50
Identities = 124/409 (30%), Positives = 208/409 (50%), Gaps = 12/409 (2%)
Frame = +3
Query: 36 EGPNPERYNIPPWVAYHQHYQKPVGVLLKKSGAWKKDRLVLNTEVMAPEAIKNFIPLLDT 215
EG P R ++ W + G W + R LN ++ P + L+
Sbjct: 123 EGKYPVRDDMKLWKEHRDQQGLSYGPFTTMGEQWYRLRQTLNQRMLKPAEAALYTDALNE 182
Query: 216 VSQDFVGVLHRRIKQQGSGKFSGDIREDLFRFAFESITNVIFGERLGMLEEIVDPEAQKF 395
V DF+ L + + SG DI + FA E+I+ ++F +R+G LE + + + F
Sbjct: 183 VINDFMDQLKQLRAESASGDHVPDIAHQFYFFALEAISYILFEKRIGCLERSIPKDTETF 242
Query: 396 IDAVYQMFHTSVPMLNLPPDLFRLFRTKTWRDHVAAWDTIFNKAEKYTQNFYWDLRRKRE 575
+ +V MFH S+ + LP L W+ ++ W+TIF+ +K ++ + +
Sbjct: 243 VRSVGLMFHNSLFVTFLPTWTRPLL--PFWKRYLDGWNTIFSFGKKLIDQKLEEIEAQLK 300
Query: 576 FNN-----YPGILYRLLGNDKLLSEDVKANVTEMLAGGVDTTSMTLQWHLYEMARSLNVQ 740
N G L+ LL + +L + + ++ E+L GVDTTS TL W LY ++++ +Q
Sbjct: 301 TENPEKTQISGYLHFLLTSGQLSPREAEGSLPELLLAGVDTTSNTLTWALYHLSKNPEIQ 360
Query: 741 EMLREEVLNARRQAQGDTSKMLQLVPLLKASIKETLRLHPISVTLQRYLVN-DLVLRDYM 917
L +EV+ Q K L +PLLKA +KETLRL+P+ R +V+ ++ + ++
Sbjct: 361 AALHKEVVGVVPAGQVPQHKDLARMPLLKAVLKETLRLYPVVPVNSRVVVDKEIEVGGFL 420
Query: 918 IPAKTLVQVAVYAMGRDPAFFSNPGQFDPTRWLGKER-DLIH----FRNLGFGWGVRQCV 1082
P T + Y + RDP + P F P RWL K + D + F ++ FG+GVR C+
Sbjct: 421 FPKNTQFVLCHYVISRDPDIYPEPDSFQPQRWLRKNQPDALKTQHPFGSVPFGYGVRACL 480
Query: 1083 GRRIAELEMTLFLIHILENFKVEL-QHFSDVDTIFNLILMPDKPIFLVF 1226
GRRIAELEM L L ++++++V L +V ++ ++L+P+K + L F
Sbjct: 481 GRRIAELEMQLLLTRLIQHYEVVLAPETGEVTSVARIVLVPNKKVGLRF 529
>ref|XP_002692553.1| PREDICTED: cytochrome P450, family 24, subfamily A, polypeptide
1-like isoform 2 [Bos taurus].
Length = 448
Score = 152 bits (383), Expect = 9e-37
Identities = 96/333 (28%), Positives = 172/333 (51%), Gaps = 2/333 (0%)
Frame = +3
Query: 24 LFKFEGPNPERYNIPPWVAYHQHYQKPVGVLLKKSGAWKKDRLVLNTEVMAPEAIKNFIP 203
L++ E +P+R I PW AY + ++ G+L+ + W++ R ++M P I
Sbjct: 118 LYRTESAHPQRLEIKPWKAYRDYREEGYGLLILEGEDWQRVRSAFQKKLMKPVEIMKLDD 177
Query: 204 LLDTVSQDFVGVLHRRIKQQGSGKFSGDIREDLFRFAFESITNVIFGERLGMLEEIVDPE 383
++ V DF+G + ++G + D+ +L +++FESI V++ +R G+L++ E
Sbjct: 178 KINEVLADFMGRIDELCDERGRIE---DLYTELNKWSFESICLVLYEKRFGLLQKNAGEE 234
Query: 384 AQKFIDAVYQMFHTSVPMLNLPPDLFRLFRTKTWRDHVAAWDTIFNKAEKYTQNFYWDLR 563
A FI AV M M+ P +L R T+ W+ H AWDTIF + N
Sbjct: 235 ALNFIMAVKTMMSMFGKMMVTPVELHRSLNTRVWQAHTQAWDTIFRSVKSCVDN------ 288
Query: 564 RKREFNNYPGI--LYRLLGNDKLLSEDVKANVTEMLAGGVDTTSMTLQWHLYEMARSLNV 737
R +++ P + L + +++L +++ A VTE+ V+TT+ +L W LY ++R+ +V
Sbjct: 289 RLEKYSEQPSMDFLCDIYHHNQLSKKELYAAVTELQLAAVETTANSLMWILYNLSRNPHV 348
Query: 738 QEMLREEVLNARRQAQGDTSKMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDYM 917
Q+ L +E+ + + Q ++ L+ +P LKA +KE++RL+P R L +VL +Y
Sbjct: 349 QQKLFKEIQSVLPENQLPRAEDLRNMPYLKACLKESMRLNPTVPFTTRTLDKAMVLGEYA 408
Query: 918 IPAKTLVQVAVYAMGRDPAFFSNPGQFDPTRWL 1016
+P + + V A +P + G P R L
Sbjct: 409 LPKGIVRKYDVVATDLEPVETLHLGNLVPGRQL 441
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 60,593,596
Number of extensions: 1790130
Number of successful extensions: 6455
Number of sequences better than 1.0e-05: 93
Number of HSP's gapped: 6314
Number of HSP's successfully gapped: 93
Length of query: 475
Length of database: 17,681,374
Length adjustment: 106
Effective length of query: 369
Effective length of database: 14,174,046
Effective search space: 5230222974
Effective search space used: 5230222974
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-006990
(1427 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_535539.2| PREDICTED: similar to Cytochrome P450 11A1, mit... 734 0.0
Alignment gi|XP_539192.2| PREDICTED: similar to Cytochrome P450 11B2, mit... 292 5e-79
Alignment gi|XP_538254.2| PREDICTED: similar to 25-hydroxyvitamin D-1 alp... 209 4e-54
Alignment gi|XP_543059.2| PREDICTED: similar to Cytochrome P450 24A1, mit... 204 1e-52
Alignment gi|XP_540989.2| PREDICTED: similar to cytochrome P450, family 2... 195 8e-50
Alignment gi|XP_853094.1| PREDICTED: similar to Cytochrome P450 27, mitoc... 189 6e-48
Alignment gi|XP_536868.2| PREDICTED: hypothetical protein XP_536868 [Cani... 109 6e-24
Alignment gi|NP_001003340.1| cytochrome P450 3A12 [Canis lupus familiaris]. 104 2e-22
Alignment gi|NP_001003338.1| cytochrome P450 3A26 [Canis lupus familiaris]. 102 7e-22
Alignment gi|XP_849364.1| PREDICTED: similar to cytochrome P450, family 4... 100 4e-21
>ref|XP_535539.2| PREDICTED: similar to Cytochrome P450 11A1, mitochondrial precursor
(CYPXIA1) (P450(scc)) (Cholesterol side-chain cleavage
enzyme) (Cholesterol desmolase) [Canis familiaris].
Length = 520
Score = 734 bits (1895), Expect = 0.0
Identities = 358/417 (85%), Positives = 385/417 (92%)
Frame = +3
Query: 3 DPEDVALLFKFEGPNPERYNIPPWVAYHQHYQKPVGVLLKKSGAWKKDRLVLNTEVMAPE 182
DPEDVALLFKFEGP PER+ IPPWVAYHQ++Q+PVGVLLKKSGAWKKDRL LN EVMAPE
Sbjct: 103 DPEDVALLFKFEGPTPERFCIPPWVAYHQYHQRPVGVLLKKSGAWKKDRLALNQEVMAPE 162
Query: 183 AIKNFIPLLDTVSQDFVGVLHRRIKQQGSGKFSGDIREDLFRFAFESITNVIFGERLGML 362
AIKNFIPLLD VSQDFV VLHRRIKQQGSGKFSGDI +DLFRFAFESITNV+FGERLGML
Sbjct: 163 AIKNFIPLLDPVSQDFVKVLHRRIKQQGSGKFSGDISDDLFRFAFESITNVMFGERLGML 222
Query: 363 EEIVDPEAQKFIDAVYQMFHTSVPMLNLPPDLFRLFRTKTWRDHVAAWDTIFNKAEKYTQ 542
EE VDPEAQ+FIDAVYQMFHTSVPML PPDLFRLF+TKTWRDHVAAWD IFNKAE YTQ
Sbjct: 223 EERVDPEAQRFIDAVYQMFHTSVPMLTFPPDLFRLFKTKTWRDHVAAWDVIFNKAEIYTQ 282
Query: 543 NFYWDLRRKREFNNYPGILYRLLGNDKLLSEDVKANVTEMLAGGVDTTSMTLQWHLYEMA 722
NFYW+LR+KR+ +NYPGIL+RLL ++KLL EDVKAN+TEMLAGGVDTTSMTLQWHLYEMA
Sbjct: 283 NFYWELRQKRDVDNYPGILHRLLKSNKLLFEDVKANITEMLAGGVDTTSMTLQWHLYEMA 342
Query: 723 RSLNVQEMLREEVLNARRQAQGDTSKMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLV 902
RSL VQE+LREEVL ARRQAQG+ S MLQLVPLLKASIKETLRLHPISVTLQRYL NDLV
Sbjct: 343 RSLEVQEVLREEVLAARRQAQGNVSTMLQLVPLLKASIKETLRLHPISVTLQRYLENDLV 402
Query: 903 LRDYMIPAKTLVQVAVYAMGRDPAFFSNPGQFDPTRWLGKERDLIHFRNLGFGWGVRQCV 1082
LR+YMIPAKTLVQV+ YAMG+DP FF NP +FDPTRWLGK+++LIHFRNLGFGWGVRQCV
Sbjct: 403 LRNYMIPAKTLVQVSTYAMGQDPTFFLNPSKFDPTRWLGKDKELIHFRNLGFGWGVRQCV 462
Query: 1083 GRRIAELEMTLFLIHILENFKVELQHFSDVDTIFNLILMPDKPIFLVFRPFNQDPLQ 1253
GRRIAELEMTLFLIHILENF+VE+Q DV T FNLILMPDKPIFL FRPFNQ P Q
Sbjct: 463 GRRIAELEMTLFLIHILENFRVEMQQLRDVGTTFNLILMPDKPIFLTFRPFNQGPPQ 519
>ref|XP_539192.2| PREDICTED: similar to Cytochrome P450 11B2, mitochondrial precursor
(CYPXIB2) (P-450Aldo) (Aldosterone synthase) (ALDOS)
(Aldosterone-synthesizing enzyme) (Steroid
18-hydroxylase) (P-450C18) [Canis familiaris].
Length = 593
Score = 292 bits (748), Expect = 5e-79
Identities = 157/408 (38%), Positives = 236/408 (57%)
Frame = +3
Query: 6 PEDVALLFKFEGPNPERYNIPPWVAYHQHYQKPVGVLLKKSGAWKKDRLVLNTEVMAPEA 185
PEDV L + E P P R + PW+AY QH GV L W+ +RL LN +V++ +A
Sbjct: 184 PEDVERLQRVESPQPWRPPLDPWLAYRQHRGHKCGVFLLNGPEWRLNRLKLNPDVLSLQA 243
Query: 186 IKNFIPLLDTVSQDFVGVLHRRIKQQGSGKFSGDIREDLFRFAFESITNVIFGERLGMLE 365
++ +IP++D V++DF L R+ Q G + DIR + + E+ + +FGERLG+L
Sbjct: 244 VQKYIPMVDGVARDFSQALRARVLQNARGSLTLDIRPSILYYTVEASSLALFGERLGLLG 303
Query: 366 EIVDPEAQKFIDAVYQMFHTSVPMLNLPPDLFRLFRTKTWRDHVAAWDTIFNKAEKYTQN 545
P + F+ A+ M ++ +L LP L R + W++H +WD I A + Q
Sbjct: 304 PSPSPASLHFLQALEAMLRSTAQLLYLPRGLSRWTSARVWKEHFESWDYIVQYANEAIQR 363
Query: 546 FYWDLRRKREFNNYPGILYRLLGNDKLLSEDVKANVTEMLAGGVDTTSMTLQWHLYEMAR 725
Y +L R +Y GI+ LL L E V+AN E+ AG VDTT+ L L+E+AR
Sbjct: 364 IYQELALGRP-QHYSGIVGELLLRADLSPEAVRANCIELTAGSVDTTAYPLWMTLFELAR 422
Query: 726 SLNVQEMLREEVLNARRQAQGDTSKMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVL 905
+ +VQ LR+E A+ + + +PLL+A++KETLRL+P+ +++ R + +D+VL
Sbjct: 423 NPDVQHALRQESQGAQAGIAENPQTAVTELPLLRAALKETLRLYPVGISVDRQVGSDVVL 482
Query: 906 RDYMIPAKTLVQVAVYAMGRDPAFFSNPGQFDPTRWLGKERDLIHFRNLGFGWGVRQCVG 1085
++Y IPA TLV+V +Y++GR+P+ F P ++ P RWL +L FG+GVRQC+G
Sbjct: 483 QNYHIPAGTLVKVQLYSLGRNPSVFERPERYHPQRWLDGRGSGTRAPSLAFGFGVRQCLG 542
Query: 1086 RRIAELEMTLFLIHILENFKVELQHFSDVDTIFNLILMPDKPIFLVFR 1229
RR+AE EM L L H+L NF VE DV ++ I+MP L FR
Sbjct: 543 RRLAETEMLLLLHHVLNNFLVETLTHEDVKMVYRFIMMPSTLPLLTFR 590
>ref|XP_538254.2| PREDICTED: similar to 25-hydroxyvitamin D-1 alpha hydroxylase,
mitochondrial precursor (Calcidiol 1-monooxygenase)
(25-OHD-1 alpha-hydroxylase) (25-hydroxyvitamin D(3)
1-alpha-hydroxylase) (VD3 1A hydroxylase) (P450C1 alpha)
(P450VD1-alpha) [Canis familiaris].
Length = 535
Score = 209 bits (533), Expect = 4e-54
Identities = 141/421 (33%), Positives = 216/421 (51%), Gaps = 14/421 (3%)
Frame = +3
Query: 6 PEDVALLFKFEGPNPERYNIPPWVAYHQHYQKPVGVLLKKSGAWKKDRLVLNTEVMAPEA 185
P V L + EGP PER + PW + +H Q+ G+L + ++ R +L ++ P A
Sbjct: 118 PALVEQLLRQEGPRPERCSFSPWAEHRRHRQRACGLLTAEGEEGQRLRSLLAPLLLRPRA 177
Query: 186 IKNFIPLLDTVSQDFVGVLHRRIKQQGSGKFSG------DIREDLFRFAFESITNVIFGE 347
+ L V +D V RR++QQ G+ +G D+ + ++F E V+ G
Sbjct: 178 AARYAAPLADVVRDLV----RRLRQQ-RGRGAGPPALVRDVAAEFYKFGLEGTAAVLLGS 232
Query: 348 RLGMLEEIVDPEAQKFIDAVYQMFHTSVPMLNLPPDLFRLFRTKTWRDHVAAWDTIFNKA 527
RLG LE V P+ FI AV +F +++ + +P L RL W WD +F A
Sbjct: 233 RLGCLEAQVPPDTDAFIRAVGSVFVSTLLTMAMPGWLHRLV-PGPWGRLCRDWDQMFAFA 291
Query: 528 EKYTQNFYWDLRRKREFNNYPGI-----LYRLLGNDKLLSEDVKANVTEMLAGGVDTTSM 692
+++ + ++ + E + L L ++L + + NVTE+L GVDT S
Sbjct: 292 QQHVERREAEVALRSEGKAAEDVGSGAHLTYFLLREELPAPSILGNVTELLLAGVDTVSN 351
Query: 693 TLQWHLYEMARSLNVQEMLREEVLNARRQAQG--DTSKMLQLVPLLKASIKETLRLHPIS 866
TL W LYE+AR +VQ L E+ A ++ L +PLLKA +KE LRL+P+
Sbjct: 352 TLSWALYELARHPDVQTALHSEITAALGPGSSAHPSAAALSQLPLLKAVVKEVLRLYPVV 411
Query: 867 VTLQRYLVNDLVLRDYMIPAKTLVQVAVYAMGRDPAFFSNPGQFDPTRWLGKERDLIHFR 1046
R D+ + DY+IP TLV + YA RDPA F P F P RWLG+ F
Sbjct: 412 PGNSRVPDKDIRVGDYIIPKNTLVTLCHYATSRDPAQFPEPNSFRPARWLGEGPAPHPFA 471
Query: 1047 NLGFGWGVRQCVGRRIAELEMTLFLIHILENFKVELQ-HFSDVDTIFNLILMPDKPIFLV 1223
+L FG+G R C+GRR+AELE+ + L IL +F+V+ + + + + +L+P++ I L
Sbjct: 472 SLPFGFGKRSCMGRRLAELELQMALAQILTHFEVQPEPGAAPIRPMTRTVLVPERSINLQ 531
Query: 1224 F 1226
F
Sbjct: 532 F 532
>ref|XP_543059.2| PREDICTED: similar to Cytochrome P450 24A1, mitochondrial precursor
(P450-CC24) (Vitamin D(3) 24-hydroxylase)
(1,25-dihydroxyvitamin D(3) 24-hydroxylase) (24-OHase)
[Canis familiaris].
Length = 514
Score = 204 bits (520), Expect = 1e-52
Identities = 120/404 (29%), Positives = 213/404 (52%), Gaps = 2/404 (0%)
Frame = +3
Query: 24 LFKFEGPNPERYNIPPWVAYHQHYQKPVGVLLKKSGAWKKDRLVLNTEVMAPEAIKNFIP 203
L++ E +P+R I PW AY + ++ G+L+ + W++ R ++M P I
Sbjct: 118 LYRTESAHPQRLEIKPWKAYRDYREEGYGLLILEGEDWQRVRSAFQKKLMKPVEIMKLDN 177
Query: 204 LLDTVSQDFVGVLHRRIKQQGSGKFSGDIREDLFRFAFESITNVIFGERLGMLEEIVDPE 383
++ V DF+G + ++G + D+ +L +++FESI V++ +R G+L + E
Sbjct: 178 KINEVLADFMGRIDELCDERGRIE---DLYSELNKWSFESICLVLYEKRFGLLRKNAGDE 234
Query: 384 AQKFIDAVYQMFHTSVPMLNLPPDLFRLFRTKTWRDHVAAWDTIFNKAEKYTQNFYWDLR 563
A FI A+ M T M+ P +L + TK W+ H AWDTIF + N
Sbjct: 235 ALNFIMAIKTMMSTFGRMMVTPVELHKSLNTKVWQAHTLAWDTIFKSVKSCIDN------ 288
Query: 564 RKREFNNYPG--ILYRLLGNDKLLSEDVKANVTEMLAGGVDTTSMTLQWHLYEMARSLNV 737
R +++ P L + +++L +++ A VTE+ V+TT+ +L W LY ++R+ +V
Sbjct: 289 RLEKYSEQPSTDFLCDIYHHNQLSKKELYAAVTELQLAAVETTANSLMWILYNLSRNPHV 348
Query: 738 QEMLREEVLNARRQAQGDTSKMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDYM 917
Q+ L +E+ + Q ++ L+ +P LKA +KE++RL P R L + VL +Y
Sbjct: 349 QQKLLKEIQRVLPENQMPRAEDLRNMPYLKACLKESMRLTPSVPFTTRTLDKETVLGEYA 408
Query: 918 IPAKTLVQVAVYAMGRDPAFFSNPGQFDPTRWLGKERDLIHFRNLGFGWGVRQCVGRRIA 1097
+P T++ + +G + F + QF P RWL +++ + F +L FG G R C+GRR+A
Sbjct: 409 LPKGTVLMLNTQVLGSNEENFKDSSQFRPERWLQEKKKINPFAHLPFGIGKRMCIGRRLA 468
Query: 1098 ELEMTLFLIHILENFKVELQHFSDVDTIFNLILMPDKPIFLVFR 1229
EL++ L L I+ + + V+ + IL+P + + + FR
Sbjct: 469 ELQLHLALCWIIRKYDIVATDHEPVEMLHLGILVPSRELPIAFR 512
>ref|XP_540989.2| PREDICTED: similar to cytochrome P450, family 27, subfamily b,
polypeptide 1 [Canis familiaris].
Length = 490
Score = 195 bits (496), Expect = 8e-50
Identities = 129/416 (31%), Positives = 214/416 (51%), Gaps = 8/416 (1%)
Frame = +3
Query: 3 DPEDVALLFKFEGPNPERYNIPPWVAYHQHYQKPVGVLLKKSGAWKKDRLVLNTEVMAPE 182
D + VA + + EG P+R N+ W Y + G++ + W K R VL ++ P
Sbjct: 72 DRDMVAQVLRAEGATPQRANMESWQEYRHLRGRSTGLISAEGEQWLKMRRVLRQRILKPR 131
Query: 183 AIKNFIPLLDTVSQDFVGVLHRRIKQQGSGKFSGDIREDLFRFAFESITNVIFGERLGML 362
+ F ++ V D + ++ Q G+ ++ E F+++ E + +++ RLG L
Sbjct: 132 DVAIFSGEINQVIADLIKRIYILKSQAEDGETVTNVNELFFKYSMEGVATILYESRLGCL 191
Query: 363 EEIVDPEAQKFIDAV---YQMFHTSVPMLNLPPDLFRLFRTKTWRDHVAAWDTIFNKAEK 533
E V +I+A+ + MF TS+ +P L L K W + +WD +F ++
Sbjct: 192 ENSVPQPTVDYIEALGLMFSMFKTSMYAGAIPRWLRPLI-PKPWLEFCRSWDGLFKFSQI 250
Query: 534 YTQNFYWDLR--RKREFNNYPGILYRLLGNDKLLSEDVKANVTEMLAGGVDTTSMTLQWH 707
+ N D++ R G+L L + +L E++ AN+TEML GVDTTS TL W
Sbjct: 251 HVDNKLKDIQCHMDRGERVRGGLLTCLFLSQELTLEEIYANMTEMLLAGVDTTSFTLSWA 310
Query: 708 LYEMARSLNVQEMLREEVLNARRQAQGDTSKMLQLVPLLKASIKETLRLHPISVTLQRYL 887
+Y +AR VQ+ L +E++ + T+ + VPL++A +KETLRL P+ R
Sbjct: 311 VYLLARHPQVQQTLYQEIVKNLGERHIPTAADVPKVPLVRALLKETLRLFPVLPGNGRVT 370
Query: 888 VNDLVLRDYMIPAKTLVQVAVYAMGRDPAFFSNPGQFDPTRWL--GKERDLIHFRNLGFG 1061
DLV+ Y+IP T + + YA + F +F P RWL G + +F ++ FG
Sbjct: 371 QEDLVVGGYLIPKGTQLALCHYATSYEDENFPRAKEFWPERWLRKGSLDRVDNFGSIPFG 430
Query: 1062 WGVRQCVGRRIAELEMTLFLIHILENFKVELQHFSD-VDTIFNLILMPDKPIFLVF 1226
+GVR C+GRRIAELE+ L +I +L++F+++ ++ V + +L P PI + F
Sbjct: 431 YGVRSCIGRRIAELEIHLAIIQLLQHFEIKPSSWTKAVPAKTHGLLTPGGPIHVRF 486
>ref|XP_853094.1| PREDICTED: similar to Cytochrome P450 27, mitochondrial precursor
(Cytochrome P-450C27/25) (Sterol 26-hydroxylase) (Sterol
27-hydroxylase) (Vitamin D(3) 25-hydroxylase)
(5-beta-cholestane-3-alpha,7-alpha,12-alpha-triol
27-hydroxylase) [Canis familiaris].
Length = 528
Score = 189 bits (480), Expect = 6e-48
Identities = 121/411 (29%), Positives = 202/411 (49%), Gaps = 12/411 (2%)
Frame = +3
Query: 36 EGPNPERYNIPPWVAYHQHYQKPVGVLLKKSGAWKKDRLVLNTEVMAPEAIKNFIPLLDT 215
EG P R ++ W + G + W + R LN ++ P + L+
Sbjct: 117 EGKYPVRNDMELWKEHRDQQGLAYGPFTTEGHHWYQLRHALNQRMLKPSEAALYTDALNE 176
Query: 216 VSQDFVGVLHRRIKQQGSGKFSGDIREDLFRFAFESITNVIFGERLGMLEEIVDPEAQKF 395
V DF+ L + + + SG D+ + FA E+I ++F +R+G LE + + F
Sbjct: 177 VVDDFMAHLSQLLAESPSGNQVSDMAHQFYYFALEAICYILFEKRIGCLERPIPQDTVAF 236
Query: 396 IDAVYQMFHTSVPMLNLPPDLFRLFRTKTWRDHVAAWDTIFNKAEKYTQNFYWDLRRKRE 575
+ +V MF SV + LP L W+ ++ W+TIF+ +K ++ + +
Sbjct: 237 VRSVGLMFQNSVYVTFLPKWTRPLL--PFWKRYLDGWNTIFSFGKKLIDQKLKEIETQLQ 294
Query: 576 FNN-----YPGILYRLLGNDKLLSEDVKANVTEMLAGGVDTTSMTLQWHLYEMARSLNVQ 740
G L+ LL +L + + ++ E+L GVDTTS T+ W LY ++++ +Q
Sbjct: 295 TKGPDEVEISGYLHFLLTRGQLSTREAMGSLPELLLAGVDTTSNTMTWALYHLSKNPEIQ 354
Query: 741 EMLREEVLNARRQAQGDTSKMLQLVPLLKASIKETLRLHPISVTLQRYLV-NDLVLRDYM 917
L +EV+ Q K +PLLKA +KETLRL+P+ R + ++ + ++
Sbjct: 355 AALHKEVVGVVPPGQVPQQKDFAHMPLLKAVLKETLRLYPVVPINSRVITEKEIEVNGFL 414
Query: 918 IPAKTLVQVAVYAMGRDPAFFSNPGQFDPTRWLGKER---DLIH--FRNLGFGWGVRQCV 1082
P T Y + RDP F P F P RWL K + +H F ++ FG+GVR C+
Sbjct: 415 FPKNTQFVFCHYVVSRDPDIFPEPESFQPYRWLRKSQLAAPGVHHAFGSVPFGYGVRACL 474
Query: 1083 GRRIAELEMTLFLIHILENFKVEL-QHFSDVDTIFNLILMPDKPIFLVFRP 1232
GRRIAELEM L L +++ ++V L +V ++ ++L+P+K + L F+P
Sbjct: 475 GRRIAELEMQLLLSRLIQQYQVVLAPETGEVKSLARIVLVPNKKVSLHFQP 525
>ref|XP_536868.2| PREDICTED: hypothetical protein XP_536868 [Canis familiaris].
Length = 503
Score = 109 bits (273), Expect = 6e-24
Identities = 96/402 (23%), Positives = 181/402 (45%), Gaps = 25/402 (6%)
Frame = +3
Query: 102 PVGVL-----LKKSGAWKKDRLVLNTEVMAPEAIKNFIPLLDTVSQDFVGVLHRRIKQQG 266
PVG + L + WK+ R +L+ + + +K P++ + VL R ++++
Sbjct: 110 PVGFMKSAISLSEDEEWKRIRTLLSPTFTSGK-LKEMFPIIG----QYGDVLVRNLRKEA 164
Query: 267 SGKFSGDIREDLFRFAFESITNVIFGERLGMLEEIVDPEAQKFIDAVYQM--------FH 422
S ++++ ++ + IT+ FG + L DP F++ + ++ F
Sbjct: 165 EKGKSINLKDIFGAYSMDVITSTSFGVNIDSLNNPQDP----FVENIKKLLKFDFLDPFF 220
Query: 423 TSVPMLNLPPDLFRLFRTKTWRDHVAAWDTIFNKAEKYTQNFYWDLRRKR---------E 575
S+ + +F + W + D ++ +N D ++ R
Sbjct: 221 FSILLFPFLTPVFEVLNI--WLFPKSVTDFFTKSVKRMKENRLKDKQKHRVDFLQLMINS 278
Query: 576 FNNYPGILYRLLGNDKLLSEDVKANVTEMLAGGVDTTSMTLQWHLYEMARSLNVQEMLRE 755
N+ ++ L + +L+++ + + G +TTS +L + +YE+A +VQ+ L+E
Sbjct: 279 QNSKETDTHKALSDLELVAQSII-----FIFAGYETTSTSLSFLMYELATHPDVQQKLQE 333
Query: 756 EVLNARRQAQGDTSKMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDYMIPAKTL 935
E+ T L + L + ETLRL+PI+ L+R D+ + IP T+
Sbjct: 334 EIDATFPNKALPTYDALVQMEYLDMVLNETLRLYPIAGRLERVCKKDVEISGVFIPKGTV 393
Query: 936 VQVAVYAMGRDPAFFSNPGQFDPTRWLGKERDLIH-FRNLGFGWGVRQCVGRRIAELEMT 1112
V V + + RD + + P +F P R+ K +D I+ + L FG G R C+G R A + M
Sbjct: 394 VMVPTFTLHRDQSLWPEPEEFRPERFSRKNKDSINPYTYLPFGTGPRNCIGMRFAIMNMK 453
Query: 1113 LFLIHILENFKVELQHFSDVDTIFNL--ILMPDKPIFLVFRP 1232
L L+ +L+NF + + + N I+ P+KPI L P
Sbjct: 454 LALVRVLQNFSFKPCKETQIPLKLNAQGIIQPEKPIVLKVEP 495
>ref|NP_001003340.1| cytochrome P450 3A12 [Canis lupus familiaris].
Length = 503
Score = 104 bits (259), Expect = 2e-22
Identities = 99/399 (24%), Positives = 176/399 (44%), Gaps = 22/399 (5%)
Frame = +3
Query: 102 PVGVL-----LKKSGAWKKDRLVLNTEVMAPEAIKNFIPLLDTVSQDFVGVLHRRIKQQG 266
PVG + L + WK+ R +L+ + +K P++ V L K+
Sbjct: 110 PVGFMKSAISLSEDEEWKRMRTLLSPTFTTGK-LKEMFPIIGQYGDVLVNNLR---KEAE 165
Query: 267 SGKFSGDIREDLFRFAFESITNVIFGERLGMLEEIVDPEAQK--------FIDAVYQMFH 422
GK + ++++ ++ + IT+ FG + L DP + F+D F
Sbjct: 166 KGK-AINLKDVFGAYSMDVITSTSFGVNIDSLNHPQDPFVENTKKLLKFDFLDP----FF 220
Query: 423 TSVPMLNLPPDLFRLFRTKTWRDHVAAWDTIFNKAEKYTQNFYWDLRRKREFNNYPGILY 602
S+ + +F + W D E+ ++ D ++ R ++ ++
Sbjct: 221 FSILLFPFLTPVFEILNI--WLFPKKVTDFFRKSVERMKESRLKDKQKHRV--DFLQLMI 276
Query: 603 -----RLLGNDKLLSE-DVKANVTEMLAGGVDTTSMTLQWHLYEMARSLNVQEMLREEVL 764
+ + K LS+ ++ A + G +TTS +L + +YE+A +VQ+ L+EE+
Sbjct: 277 NSQNSKEMDTHKALSDLELVAQSIIFIFAGYETTSTSLSFLMYELATHPDVQQKLQEEID 336
Query: 765 NARRQAQGDTSKMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQV 944
T L + L + ETLRL+PI+ L+R D+ + IP T+V V
Sbjct: 337 ATFPNKALPTYDALVQMEYLDMVLNETLRLYPIAGRLERVCKKDVEISGVFIPKGTVVMV 396
Query: 945 AVYAMGRDPAFFSNPGQFDPTRWLGKERDLIH-FRNLGFGWGVRQCVGRRIAELEMTLFL 1121
+ + RD + + P +F P R+ K +D I+ + L FG G R C+G R A + M L L
Sbjct: 397 PTFTLHRDQSLWPEPEEFRPERFSRKNKDSINPYTYLPFGTGPRNCIGMRFAIMNMKLAL 456
Query: 1122 IHILENFKVELQHFSDVDTIFNL--ILMPDKPIFLVFRP 1232
+ +L+NF + + + N I+ P+KPI L P
Sbjct: 457 VRVLQNFSFKPCKETQIPLKLNAQGIIQPEKPIVLKVEP 495
>ref|NP_001003338.1| cytochrome P450 3A26 [Canis lupus familiaris].
Length = 503
Score = 102 bits (255), Expect = 7e-22
Identities = 95/393 (24%), Positives = 175/393 (44%), Gaps = 16/393 (4%)
Frame = +3
Query: 102 PVGVL-----LKKSGAWKKDRLVLNTEVMAPEAIKNFIPLLDTVSQDFVGVLHRRIKQQG 266
PVG + L + WK+ R +L+ + +K P++ V L K+
Sbjct: 110 PVGFMKSAISLSEDEEWKRIRTLLSPTFTTGK-LKEMFPIIGQYGDVLVNNLR---KEAE 165
Query: 267 SGKFSGDIREDLFRFAFESITNVIFGERLGMLEEIVDPEAQKFIDAV-YQMFHTSVPMLN 443
GK + ++++ ++ + IT++ FG + L DP + + + + + +
Sbjct: 166 KGK-AINLKDVFGAYSMDVITSISFGVNIDSLNHPQDPFVENTKNLLKFDFLDPFLFSIL 224
Query: 444 LPPDLFRLFRT-KTWRDHVAAWDTIFNKAEKYTQNFYWDLRRKREFNNYPGILY-----R 605
L P L +F W D E+ ++ D ++ R ++ ++ +
Sbjct: 225 LFPFLTPVFEILNIWLFPKKVTDFFRKSVERMKESRLKDKQKHRV--DFLQLMINSQNSK 282
Query: 606 LLGNDKLLSE-DVKANVTEMLAGGVDTTSMTLQWHLYEMARSLNVQEMLREEVLNARRQA 782
+ K LS+ ++ A + G +TTS L + +YE+A +VQ+ L+EE+
Sbjct: 283 EMDTHKALSDLELVAQSIVFIFAGYETTSSCLSFLMYELATHRDVQQKLQEEIDATFPNK 342
Query: 783 QGDTSKMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQVAVYAMG 962
T + L + L + ETLRL+ ++ L+R D+ + IP T+V V + +
Sbjct: 343 AAPTYEALVQMEYLDMVLNETLRLYSVAGRLERVCKKDVEISGVFIPKGTVVMVPTFILH 402
Query: 963 RDPAFFSNPGQFDPTRWLGKERDLIH-FRNLGFGWGVRQCVGRRIAELEMTLFLIHILEN 1139
RD + P +F P R+ K +D I+ + L FG G R C+G R A + M L L+ +L+N
Sbjct: 403 RDQNLWPEPEEFRPERFSRKNKDSINPYTYLPFGTGPRNCIGMRFAIMNMKLALVRVLQN 462
Query: 1140 FKVELQHFSDVDTIFNL--ILMPDKPIFLVFRP 1232
F + + + N I+ P+KP+ L P
Sbjct: 463 FSFKSCKETQISLRINTRGIIQPEKPVVLKVEP 495
>ref|XP_849364.1| PREDICTED: similar to cytochrome P450, family 4, subfamily v,
polypeptide 2 [Canis familiaris].
Length = 575
Score = 100 bits (248), Expect = 4e-21
Identities = 101/417 (24%), Positives = 173/417 (41%), Gaps = 23/417 (5%)
Frame = +3
Query: 63 IPPWVAYHQHYQKPVGVLLKKSGAWKKDRLVLNTEVMAPEAIKNFIPLLDTVSQDFVGVL 242
+ PW+ +G+L W+ R +L T +++F+ +++ + V L
Sbjct: 177 LEPWLG--------LGLLTSTGNKWRSRRKML-TPTFHFTILEDFLDVMNEHANILVNKL 227
Query: 243 HRRIKQQGSGKFSGDIREDLFRFAFESITNVIFGERLGMLEEIVDPEAQKFIDAVYQMFH 422
+ + Q+ F + A + I G+ +G E +++ A+Y+M
Sbjct: 228 EKHVNQEAFNCFFY-----ITLCALDIICETAMGKNIGAQNN----EDSEYVRAIYRMSD 278
Query: 423 TSVPMLNLP----PDLFRLFRTKTWRDHVAAWDTIFNKAEKYTQNFYWDLRRKREF---- 578
T + +P LF +F K R+H + + N +L+R E
Sbjct: 279 TIHRRMKMPWLWLDFLFLMF--KEGREHKRNLEILHNFTNNVITERASELKRDEEHGSAD 336
Query: 579 -------NNYPGILYRLLG-----NDKLLSEDVKANVTEMLAGGVDTTSMTLQWHLYEMA 722
N L LL +KL EDV+ V + G DTT+ + W LY +
Sbjct: 337 KDCSPSKNKRRAFLDLLLNVTDDEGNKLRHEDVREEVDTFMFEGHDTTAAAINWSLYLLG 396
Query: 723 RSLNVQEMLREEVLNA-RRQAQGDTSKMLQLVPLLKASIKETLRLHPISVTLQRYLVNDL 899
VQ+ + E+ + + + T + L+ + L+ IKE+LRL P R L D
Sbjct: 397 SYPEVQKQVDSELEDVFGKSDRPATLEDLKKLKYLECVIKESLRLFPSVPLFARNLNEDC 456
Query: 900 VLRDYMIPAKTLVQVAVYAMGRDPAFFSNPGQFDPTRWLGKERDLIH-FRNLGFGWGVRQ 1076
V+ Y + + + YA+ RDP +F NP +F P R+ + H + + F G R
Sbjct: 457 VVAGYKVVKGSQAIIIPYALHRDPRYFPNPEEFQPERFFPENLQGRHPYAYIPFSAGPRN 516
Query: 1077 CVGRRIAELEMTLFLIHILENFKVEL-QHFSDVDTIFNLILMPDKPIFLVFRPFNQD 1244
C+G+R A +E L +L +F VE Q ++ LIL P I++ + N D
Sbjct: 517 CIGQRFAIMEEKTVLSCVLRHFWVESNQKREELGLAGELILRPTNGIWIKLKRRNAD 573
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 63,314,424
Number of extensions: 1856909
Number of successful extensions: 6252
Number of sequences better than 1.0e-05: 52
Number of HSP's gapped: 6174
Number of HSP's successfully gapped: 52
Length of query: 475
Length of database: 18,874,504
Length adjustment: 107
Effective length of query: 368
Effective length of database: 15,307,552
Effective search space: 5633179136
Effective search space used: 5633179136
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-006990
(1427 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_000772.2| cholesterol side-chain cleavage enzyme, mitocho... 688 0.0
Alignment gi|NP_001093243.1| cholesterol side-chain cleavage enzyme, mito... 588 e-168
Alignment gi|NP_000488.3| cytochrome P450 11B1, mitochondrial isoform 1 p... 301 8e-82
Alignment gi|NP_000489.3| cytochrome P450 11B2, mitochondrial precursor [... 301 8e-82
Alignment gi|NP_001021384.1| cytochrome P450 11B1, mitochondrial isoform ... 219 5e-57
Alignment gi|NP_000776.1| 25-hydroxyvitamin D-1 alpha hydroxylase, mitoch... 209 5e-54
Alignment gi|NP_000773.2| 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mito... 201 1e-51
Alignment gi|NP_000775.1| sterol 26-hydroxylase, mitochondrial precursor ... 190 2e-48
Alignment gi|NP_001001665.3| cytochrome P450 27C1 [Homo sapiens]. 173 4e-43
Alignment gi|NP_001122387.1| 1,25-dihydroxyvitamin D(3) 24-hydroxylase, m... 154 3e-37
>ref|NP_000772.2| cholesterol side-chain cleavage enzyme, mitochondrial isoform a
precursor [Homo sapiens].
Length = 521
Score = 688 bits (1775), Expect = 0.0
Identities = 331/418 (79%), Positives = 375/418 (89%), Gaps = 1/418 (0%)
Frame = +3
Query: 3 DPEDVALLFKFEGPNPERYNIPPWVAYHQHYQKPVGVLLKKSGAWKKDRLVLNTEVMAPE 182
DPEDVALLFK EGPNPER+ IPPWVAYHQ+YQ+P+GVLLKKS AWKKDR+ LN EVMAPE
Sbjct: 103 DPEDVALLFKSEGPNPERFLIPPWVAYHQYYQRPIGVLLKKSAAWKKDRVALNQEVMAPE 162
Query: 183 AIKNFIPLLDTVSQDFVGVLHRRIKQQGSGKFSGDIREDLFRFAFESITNVIFGERLGML 362
A KNF+PLLD VS+DFV VLHRRIK+ GSG +SGDI +DLFRFAFESITNVIFGER GML
Sbjct: 163 ATKNFLPLLDAVSRDFVSVLHRRIKKAGSGNYSGDISDDLFRFAFESITNVIFGERQGML 222
Query: 363 EEIVDPEAQKFIDAVYQMFHTSVPMLNLPPDLFRLFRTKTWRDHVAAWDTIFNKAEKYTQ 542
EE+V+PEAQ+FIDA+YQMFHTSVPMLNLPPDLFRLFRTKTW+DHVAAWD IF+KA+ YTQ
Sbjct: 223 EEVVNPEAQRFIDAIYQMFHTSVPMLNLPPDLFRLFRTKTWKDHVAAWDVIFSKADIYTQ 282
Query: 543 NFYWDLRRKREFNN-YPGILYRLLGNDKLLSEDVKANVTEMLAGGVDTTSMTLQWHLYEM 719
NFYW+LR+K ++ Y GILYRLLG+ K+ ED+KANVTEMLAGGVDTTSMTLQWHLYEM
Sbjct: 283 NFYWELRQKGSVHHDYRGILYRLLGDSKMSFEDIKANVTEMLAGGVDTTSMTLQWHLYEM 342
Query: 720 ARSLNVQEMLREEVLNARRQAQGDTSKMLQLVPLLKASIKETLRLHPISVTLQRYLVNDL 899
AR+L VQ+MLR EVL AR QAQGD + MLQLVPLLKASIKETLRLHPISVTLQRYLVNDL
Sbjct: 343 ARNLKVQDMLRAEVLAARHQAQGDMATMLQLVPLLKASIKETLRLHPISVTLQRYLVNDL 402
Query: 900 VLRDYMIPAKTLVQVAVYAMGRDPAFFSNPGQFDPTRWLGKERDLIHFRNLGFGWGVRQC 1079
VLRDYMIPAKTLVQVA+YA+GR+P FF +P FDPTRWL K++++ +FRNLGFGWGVRQC
Sbjct: 403 VLRDYMIPAKTLVQVAIYALGREPTFFFDPENFDPTRWLSKDKNITYFRNLGFGWGVRQC 462
Query: 1080 VGRRIAELEMTLFLIHILENFKVELQHFSDVDTIFNLILMPDKPIFLVFRPFNQDPLQ 1253
+GRRIAELEMT+FLI++LENF+VE+QH SDV T FNLILMP+KPI F PFNQ+ Q
Sbjct: 463 LGRRIAELEMTIFLINMLENFRVEIQHLSDVGTTFNLILMPEKPISFTFWPFNQEATQ 520
>ref|NP_001093243.1| cholesterol side-chain cleavage enzyme, mitochondrial isoform b [Homo
sapiens].
Length = 363
Score = 588 bits (1515), Expect = e-168
Identities = 285/362 (78%), Positives = 324/362 (89%), Gaps = 1/362 (0%)
Frame = +3
Query: 171 MAPEAIKNFIPLLDTVSQDFVGVLHRRIKQQGSGKFSGDIREDLFRFAFESITNVIFGER 350
MAPEA KNF+PLLD VS+DFV VLHRRIK+ GSG +SGDI +DLFRFAFESITNVIFGER
Sbjct: 1 MAPEATKNFLPLLDAVSRDFVSVLHRRIKKAGSGNYSGDISDDLFRFAFESITNVIFGER 60
Query: 351 LGMLEEIVDPEAQKFIDAVYQMFHTSVPMLNLPPDLFRLFRTKTWRDHVAAWDTIFNKAE 530
GMLEE+V+PEAQ+FIDA+YQMFHTSVPMLNLPPDLFRLFRTKTW+DHVAAWD IF+KA+
Sbjct: 61 QGMLEEVVNPEAQRFIDAIYQMFHTSVPMLNLPPDLFRLFRTKTWKDHVAAWDVIFSKAD 120
Query: 531 KYTQNFYWDLRRKREFNN-YPGILYRLLGNDKLLSEDVKANVTEMLAGGVDTTSMTLQWH 707
YTQNFYW+LR+K ++ Y GILYRLLG+ K+ ED+KANVTEMLAGGVDTTSMTLQWH
Sbjct: 121 IYTQNFYWELRQKGSVHHDYRGILYRLLGDSKMSFEDIKANVTEMLAGGVDTTSMTLQWH 180
Query: 708 LYEMARSLNVQEMLREEVLNARRQAQGDTSKMLQLVPLLKASIKETLRLHPISVTLQRYL 887
LYEMAR+L VQ+MLR EVL AR QAQGD + MLQLVPLLKASIKETLRLHPISVTLQRYL
Sbjct: 181 LYEMARNLKVQDMLRAEVLAARHQAQGDMATMLQLVPLLKASIKETLRLHPISVTLQRYL 240
Query: 888 VNDLVLRDYMIPAKTLVQVAVYAMGRDPAFFSNPGQFDPTRWLGKERDLIHFRNLGFGWG 1067
VNDLVLRDYMIPAKTLVQVA+YA+GR+P FF +P FDPTRWL K++++ +FRNLGFGWG
Sbjct: 241 VNDLVLRDYMIPAKTLVQVAIYALGREPTFFFDPENFDPTRWLSKDKNITYFRNLGFGWG 300
Query: 1068 VRQCVGRRIAELEMTLFLIHILENFKVELQHFSDVDTIFNLILMPDKPIFLVFRPFNQDP 1247
VRQC+GRRIAELEMT+FLI++LENF+VE+QH SDV T FNLILMP+KPI F PFNQ+
Sbjct: 301 VRQCLGRRIAELEMTIFLINMLENFRVEIQHLSDVGTTFNLILMPEKPISFTFWPFNQEA 360
Query: 1248 LQ 1253
Q
Sbjct: 361 TQ 362
>ref|NP_000488.3| cytochrome P450 11B1, mitochondrial isoform 1 precursor [Homo
sapiens].
Length = 503
Score = 301 bits (772), Expect = 8e-82
Identities = 158/411 (38%), Positives = 242/411 (58%)
Frame = +3
Query: 6 PEDVALLFKFEGPNPERYNIPPWVAYHQHYQKPVGVLLKKSGAWKKDRLVLNTEVMAPEA 185
PEDV L + + +P R ++ PWVAY QH GV L W+ +RL LN EV++P A
Sbjct: 94 PEDVEKLQQVDSLHPHRMSLEPWVAYRQHRGHKCGVFLLNGPEWRFNRLRLNPEVLSPNA 153
Query: 186 IKNFIPLLDTVSQDFVGVLHRRIKQQGSGKFSGDIREDLFRFAFESITNVIFGERLGMLE 365
++ F+P++D V++DF L +++ Q G + D++ +F + E+ +FGERLG++
Sbjct: 154 VQRFLPMVDAVARDFSQALKKKVLQNARGSLTLDVQPSIFHYTIEASNLALFGERLGLVG 213
Query: 366 EIVDPEAQKFIDAVYQMFHTSVPMLNLPPDLFRLFRTKTWRDHVAAWDTIFNKAEKYTQN 545
+ F+ A+ MF ++V ++ +P L R K W++H AWD IF + Q
Sbjct: 214 HSPSSASLNFLHALEVMFKSTVQLMFMPRSLSRWTSPKVWKEHFEAWDCIFQYGDNCIQK 273
Query: 546 FYWDLRRKREFNNYPGILYRLLGNDKLLSEDVKANVTEMLAGGVDTTSMTLQWHLYEMAR 725
Y +L R Y I+ LL N +L + +KAN E+ AG VDTT L L+E+AR
Sbjct: 274 IYQELAFSRP-QQYTSIVAELLLNAELSPDAIKANSMELTAGSVDTTVFPLLMTLFELAR 332
Query: 726 SLNVQEMLREEVLNARRQAQGDTSKMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVL 905
+ NVQ+ LR+E L A K +PLL+A++KETLRL+P+ + L+R +DLVL
Sbjct: 333 NPNVQQALRQESLAAAASISEHPQKATTELPLLRAALKETLRLYPVGLFLERVASSDLVL 392
Query: 906 RDYMIPAKTLVQVAVYAMGRDPAFFSNPGQFDPTRWLGKERDLIHFRNLGFGWGVRQCVG 1085
++Y IPA TLV+V +Y++GR+PA F P +++P RWL +F ++ FG+G+RQC+G
Sbjct: 393 QNYHIPAGTLVRVFLYSLGRNPALFPRPERYNPQRWLDIRGSGRNFYHVPFGFGMRQCLG 452
Query: 1086 RRIAELEMTLFLIHILENFKVELQHFSDVDTIFNLILMPDKPIFLVFRPFN 1238
RR+AE EM L L H+L++ +VE D+ +++ IL P L FR N
Sbjct: 453 RRLAEAEMLLLLHHVLKHLQVETLTQEDIKMVYSFILRPSMFPLLTFRAIN 503
>ref|NP_000489.3| cytochrome P450 11B2, mitochondrial precursor [Homo sapiens].
Length = 503
Score = 301 bits (772), Expect = 8e-82
Identities = 158/411 (38%), Positives = 245/411 (59%)
Frame = +3
Query: 6 PEDVALLFKFEGPNPERYNIPPWVAYHQHYQKPVGVLLKKSGAWKKDRLVLNTEVMAPEA 185
PEDV L + + +P R + PWVAY QH GV L W+ +RL LN +V++P+A
Sbjct: 94 PEDVEKLQQVDSLHPCRMILEPWVAYRQHRGHKCGVFLLNGPEWRFNRLRLNPDVLSPKA 153
Query: 186 IKNFIPLLDTVSQDFVGVLHRRIKQQGSGKFSGDIREDLFRFAFESITNVIFGERLGMLE 365
++ F+P++D V++DF L +++ Q G + D++ +F + E+ +FGERLG++
Sbjct: 154 VQRFLPMVDAVARDFSQALKKKVLQNARGSLTLDVQPSIFHYTIEASNLALFGERLGLVG 213
Query: 366 EIVDPEAQKFIDAVYQMFHTSVPMLNLPPDLFRLFRTKTWRDHVAAWDTIFNKAEKYTQN 545
+ F+ A+ MF ++V ++ +P L R K W++H AWD IF + Q
Sbjct: 214 HSPSSASLNFLHALEVMFKSTVQLMFMPRSLSRWISPKVWKEHFEAWDCIFQYGDNCIQK 273
Query: 546 FYWDLRRKREFNNYPGILYRLLGNDKLLSEDVKANVTEMLAGGVDTTSMTLQWHLYEMAR 725
Y +L R +Y GI+ LL +L E +KAN E+ AG VDTT+ L L+E+AR
Sbjct: 274 IYQELAFNRP-QHYTGIVAELLLKAELSLEAIKANSMELTAGSVDTTAFPLLMTLFELAR 332
Query: 726 SLNVQEMLREEVLNARRQAQGDTSKMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVL 905
+ +VQ++LR+E L A K +PLL+A++KETLRL+P+ + L+R + +DLVL
Sbjct: 333 NPDVQQILRQESLAAAASISEHPQKATTELPLLRAALKETLRLYPVGLFLERVVSSDLVL 392
Query: 906 RDYMIPAKTLVQVAVYAMGRDPAFFSNPGQFDPTRWLGKERDLIHFRNLGFGWGVRQCVG 1085
++Y IPA TLVQV +Y++GR+ A F P +++P RWL +F ++ FG+G+RQC+G
Sbjct: 393 QNYHIPAGTLVQVFLYSLGRNAALFPRPERYNPQRWLDIRGSGRNFHHVPFGFGMRQCLG 452
Query: 1086 RRIAELEMTLFLIHILENFKVELQHFSDVDTIFNLILMPDKPIFLVFRPFN 1238
RR+AE EM L L H+L++F VE D+ +++ IL P L FR N
Sbjct: 453 RRLAEAEMLLLLHHVLKHFLVETLTQEDIKMVYSFILRPGTSPLLTFRAIN 503
>ref|NP_001021384.1| cytochrome P450 11B1, mitochondrial isoform 2 precursor [Homo
sapiens].
Length = 437
Score = 219 bits (558), Expect = 5e-57
Identities = 120/336 (35%), Positives = 186/336 (55%), Gaps = 5/336 (1%)
Frame = +3
Query: 6 PEDVALLFKFEGPNPERYNIPPWVAYHQHYQKPVGVLLKKSGAWKKDRLVLNTEVMAPEA 185
PEDV L + + +P R ++ PWVAY QH GV L W+ +RL LN EV++P A
Sbjct: 94 PEDVEKLQQVDSLHPHRMSLEPWVAYRQHRGHKCGVFLLNGPEWRFNRLRLNPEVLSPNA 153
Query: 186 IKNFIPLLDTVSQDFVGVLHRRIKQQGSGKFSGDIREDLFRFAFESITNVIFGERLGMLE 365
++ F+P++D V++DF L +++ Q G + D++ +F + E+ +FGERLG++
Sbjct: 154 VQRFLPMVDAVARDFSQALKKKVLQNARGSLTLDVQPSIFHYTIEASNLALFGERLGLVG 213
Query: 366 EIVDPEAQKFIDAVYQMFHTSVPMLNLPPDLFRLFRTKTWRDHVAAWDTIFNKAEKYTQN 545
+ F+ A+ MF ++V ++ +P L R K W++H AWD IF + Q
Sbjct: 214 HSPSSASLNFLHALEVMFKSTVQLMFMPRSLSRWTSPKVWKEHFEAWDCIFQYGDNCIQK 273
Query: 546 FYWDLRRKREFNNYPGILYRLLGNDKLLSEDVKANVTEMLAGGVDTTSMTLQWHLYEMAR 725
Y +L R Y I+ LL N +L + +KAN E+ AG VDTT L L+E+AR
Sbjct: 274 IYQELAFSRP-QQYTSIVAELLLNAELSPDAIKANSMELTAGSVDTTVFPLLMTLFELAR 332
Query: 726 SLNVQEMLREEVLNARRQAQGDTSKMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVL 905
+ NVQ+ LR+E L A K +PLL+A++KETLRL+P+ + L+R +DLVL
Sbjct: 333 NPNVQQALRQESLAAAASISEHPQKATTELPLLRAALKETLRLYPVGLFLERVASSDLVL 392
Query: 906 RDYMIPAKTLVQVAVYAMGRDP-----AFFSNPGQF 998
++Y IPA L + V + ++ +F P F
Sbjct: 393 QNYHIPAGVLKHLQVETLTQEDIKMVYSFILRPSMF 428
>ref|NP_000776.1| 25-hydroxyvitamin D-1 alpha hydroxylase, mitochondrial [Homo
sapiens].
Length = 508
Score = 209 bits (532), Expect = 5e-54
Identities = 142/422 (33%), Positives = 213/422 (50%), Gaps = 15/422 (3%)
Frame = +3
Query: 6 PEDVALLFKFEGPNPERYNIPPWVAYHQHYQKPVGVLLKKSGAWKKDRLVLNTEVMAPEA 185
P V L + EGP PER + PW + + Q+ G+L + W++ R +L ++ P+A
Sbjct: 91 PALVEELLRQEGPRPERCSFSPWTEHRRCRQRACGLLTAEGEEWQRLRSLLAPLLLRPQA 150
Query: 186 IKNFIPLLDTVSQDFVGVLHR-RIKQQGSGKFSGDIREDLFRFAFESITNVIFGERLGML 362
+ L+ V D V L R R + G D+ + ++F E I V+ G RLG L
Sbjct: 151 AARYAGTLNNVVCDLVRRLRRQRGRGTGPPALVRDVAGEFYKFGLEGIAAVLLGSRLGCL 210
Query: 363 EEIVDPEAQKFIDAVYQMFHTSVPMLNLPPDLFRLFRTKTWRDHVAAWDTIFNKAEKYTQ 542
E V P+ + FI AV +F +++ + +P L L W WD +F A+++ +
Sbjct: 211 EAQVPPDTETFIRAVGSVFVSTLLTMAMPHWLRHLV-PGPWGRLCRDWDQMFAFAQRHVE 269
Query: 543 NFYWDLRRKREFNNYPG-----------ILYRLLGNDKLLSEDVKANVTEMLAGGVDTTS 689
RR+ E G L L ++L ++ + NVTE+L GVDT S
Sbjct: 270 ------RREAEAAMRNGGQPEKDLESGAHLTHFLFREELPAQSILGNVTELLLAGVDTVS 323
Query: 690 MTLQWHLYEMARSLNVQEMLREEVLNARRQAQG--DTSKMLQLVPLLKASIKETLRLHPI 863
TL W LYE++R VQ L E+ A ++ +L +PLLKA +KE LRL+P+
Sbjct: 324 NTLSWALYELSRHPEVQTALHSEITAALSPGSSAYPSATVLSQLPLLKAVVKEVLRLYPV 383
Query: 864 SVTLQRYLVNDLVLRDYMIPAKTLVQVAVYAMGRDPAFFSNPGQFDPTRWLGKERDLIHF 1043
R D+ + DY+IP TLV + YA RDPA F P F P RWLG+ F
Sbjct: 384 VPGNSRVPDKDIHVGDYIIPKNTLVTLCHYATSRDPAQFPEPNSFRPARWLGEGPTPHPF 443
Query: 1044 RNLGFGWGVRQCVGRRIAELEMTLFLIHILENFKVELQ-HFSDVDTIFNLILMPDKPIFL 1220
+L FG+G R C+GRR+AELE+ + L IL +F+V+ + + V +L+P++ I L
Sbjct: 444 ASLPFGFGKRSCMGRRLAELELQMALAQILTHFEVQPEPGAAPVRPKTRTVLVPERSINL 503
Query: 1221 VF 1226
F
Sbjct: 504 QF 505
>ref|NP_000773.2| 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial isoform 1
precursor [Homo sapiens].
Length = 514
Score = 201 bits (512), Expect = 1e-51
Identities = 118/403 (29%), Positives = 210/403 (52%), Gaps = 2/403 (0%)
Frame = +3
Query: 24 LFKFEGPNPERYNIPPWVAYHQHYQKPVGVLLKKSGAWKKDRLVLNTEVMAPEAIKNFIP 203
L++ E P+R I PW AY + ++ G+L+ + W++ R ++M P +
Sbjct: 118 LYRTESAYPQRLEIKPWKAYRDYRKEGYGLLILEGEDWQRVRSAFQKKLMKPGEVMKLDN 177
Query: 204 LLDTVSQDFVGVLHRRIKQQGSGKFSGDIREDLFRFAFESITNVIFGERLGMLEEIVDPE 383
++ V DF+G + ++G + D+ +L +++FESI V++ +R G+L++ E
Sbjct: 178 KINEVLADFMGRIDELCDERGHVE---DLYSELNKWSFESICLVLYEKRFGLLQKNAGDE 234
Query: 384 AQKFIDAVYQMFHTSVPMLNLPPDLFRLFRTKTWRDHVAAWDTIFNKAEKYTQNFYWDLR 563
A FI A+ M T M+ P +L + TK W+DH AWDTIF + N
Sbjct: 235 AVNFIMAIKTMMSTFGRMMVTPVELHKSLNTKVWQDHTLAWDTIFKSVKACIDN------ 288
Query: 564 RKREFNNYPG--ILYRLLGNDKLLSEDVKANVTEMLAGGVDTTSMTLQWHLYEMARSLNV 737
R +++ P L + ++L +++ A VTE+ V+TT+ +L W LY ++R+ V
Sbjct: 289 RLEKYSQQPSADFLCDIYHQNRLSKKELYAAVTELQLAAVETTANSLMWILYNLSRNPQV 348
Query: 738 QEMLREEVLNARRQAQGDTSKMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDYM 917
Q+ L +E+ + + Q ++ L+ +P LKA +KE++RL P R L VL +Y
Sbjct: 349 QQKLLKEIQSVLPENQVPRAEDLRNMPYLKACLKESMRLTPSVPFTTRTLDKATVLGEYA 408
Query: 918 IPAKTLVQVAVYAMGRDPAFFSNPGQFDPTRWLGKERDLIHFRNLGFGWGVRQCVGRRIA 1097
+P T++ + +G F + QF P RWL ++ + F +L FG G R C+GRR+A
Sbjct: 409 LPKGTVLMLNTQVLGSSEDNFEDSSQFRPERWLQEKEKINPFAHLPFGVGKRMCIGRRLA 468
Query: 1098 ELEMTLFLIHILENFKVELQHFSDVDTIFNLILMPDKPIFLVF 1226
EL++ L L I+ + ++ V+ + + L+P + + + F
Sbjct: 469 ELQLHLALCWIVRKYDIQATDNEPVEMLHSGTLVPSRELPIAF 511
>ref|NP_000775.1| sterol 26-hydroxylase, mitochondrial precursor [Homo sapiens].
Length = 531
Score = 190 bits (483), Expect = 2e-48
Identities = 119/408 (29%), Positives = 198/408 (48%), Gaps = 11/408 (2%)
Frame = +3
Query: 36 EGPNPERYNIPPWVAYHQHYQKPVGVLLKKSGAWKKDRLVLNTEVMAPEAIKNFIPLLDT 215
EG P R ++ W + + G + W + R LN ++ P + +
Sbjct: 121 EGKYPVRNDMELWKEHRDQHDLTYGPFTTEGHHWYQLRQALNQRLLKPAEAALYTDAFNE 180
Query: 216 VSQDFVGVLHRRIKQQGSGKFSGDIREDLFRFAFESITNVIFGERLGMLEEIVDPEAQKF 395
V DF+ L + + SG D+ + + FA E+I ++F +R+G L+ + + F
Sbjct: 181 VIDDFMTRLDQLRAESASGNQVSDMAQLFYYFALEAICYILFEKRIGCLQRSIPEDTVTF 240
Query: 396 IDAVYQMFHTSVPMLNLPPDLFRLFRTKTWRDHVAAWDTIFNKAEKYTQNFYWDLRRKRE 575
+ ++ MF S+ LP + W+ ++ W+ IF+ +K D+ + +
Sbjct: 241 VRSIGLMFQNSLYATFLPKWTRPVL--PFWKRYLDGWNAIFSFGKKLIDEKLEDMEAQLQ 298
Query: 576 FNNYPGI-----LYRLLGNDKLLSEDVKANVTEMLAGGVDTTSMTLQWHLYEMARSLNVQ 740
GI L+ LL + +L + ++ E+L GVDTTS TL W LY +++ +Q
Sbjct: 299 AAGPDGIQVSGYLHFLLASGQLSPREAMGSLPELLMAGVDTTSNTLTWALYHLSKDPEIQ 358
Query: 741 EMLREEVLNARRQAQGDTSKMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDYMI 920
E L EEV+ Q K +PLLKA +KETLRL+P+ T R + ++ + ++
Sbjct: 359 EALHEEVVGVVPAGQVPQHKDFAHMPLLKAVLKETLRLYPVVPTNSRIIEKEIEVDGFLF 418
Query: 921 PAKTLVQVAVYAMGRDPAFFSNPGQFDPTRWLGKERDLI-----HFRNLGFGWGVRQCVG 1085
P T Y + RDP FS P F P RWL + F ++ FG+GVR C+G
Sbjct: 419 PKNTQFVFCHYVVSRDPTAFSEPESFQPHRWLRNSQPATPRIQHPFGSVPFGYGVRACLG 478
Query: 1086 RRIAELEMTLFLIHILENFKVEL-QHFSDVDTIFNLILMPDKPIFLVF 1226
RRIAELEM L L +++ +KV L ++ ++ ++L+P+K + L F
Sbjct: 479 RRIAELEMQLLLARLIQKYKVVLAPETGELKSVARIVLVPNKKVGLQF 526
>ref|NP_001001665.3| cytochrome P450 27C1 [Homo sapiens].
Length = 372
Score = 173 bits (438), Expect = 4e-43
Identities = 114/368 (30%), Positives = 195/368 (52%), Gaps = 8/368 (2%)
Frame = +3
Query: 147 RLVLNTEVMAPEAIKNFIPLLDTVSQDFVGVLHRRIKQQGSGKFSGDIREDLFRFAFESI 326
R VL ++ P+ + + ++ V D + ++ Q G+ ++ + F+++ E +
Sbjct: 2 RSVLRQRILKPKDVAIYSGEVNQVIADLIKRIYLLRSQAEDGETVTNVNDLFFKYSMEGV 61
Query: 327 TNVIFGERLGMLEEIVDPEAQKFIDAV---YQMFHTSVPMLNLPPDLFRLFRTKTWRDHV 497
+++ RLG LE + ++I+A+ + MF TS+ +P L R F K WR+
Sbjct: 62 ATILYESRLGCLENSIPQLTVEYIEALELMFSMFKTSMYAGAIPRWL-RPFIPKPWREFC 120
Query: 498 AAWDTIFNKAEKYTQNFYWDLRRKREFNNYP--GILYRLLGNDKLLSEDVKANVTEMLAG 671
+WD +F ++ + N D++ + + G+L L + L +++ ANVTEML
Sbjct: 121 RSWDGLFKFSQIHVDNKLRDIQYQMDRGRRVSGGLLTYLFLSQALTLQEIYANVTEMLLA 180
Query: 672 GVDTTSMTLQWHLYEMARSLNVQEMLREEVLNARRQAQGDTSKMLQLVPLLKASIKETLR 851
GVDTTS TL W +Y +AR VQ+ + E++ + T+ + VPL++A +KETLR
Sbjct: 181 GVDTTSFTLSWTVYLLARHPEVQQTVYREIVKNLGERHVPTAADVPKVPLVRALLKETLR 240
Query: 852 LHPISVTLQRYLVNDLVLRDYMIPAKTLVQVAVYAMGRDPAFFSNPGQFDPTRWLGK-ER 1028
L P+ R DLV+ Y+IP T + + YA F +F P RWL K +
Sbjct: 241 LFPVLPGNGRVTQEDLVIGGYLIPKGTQLALCHYATSYQDENFPRAKEFRPERWLRKGDL 300
Query: 1029 DLI-HFRNLGFGWGVRQCVGRRIAELEMTLFLIHILENFKVELQHFSD-VDTIFNLILMP 1202
D + +F ++ FG GVR C+GRRIAELE+ L +I +L++F+++ ++ V + +L P
Sbjct: 301 DRVDNFGSIPFGHGVRSCIGRRIAELEIHLVVIQLLQHFEIKTSSQTNAVHAKTHGLLTP 360
Query: 1203 DKPIFLVF 1226
PI + F
Sbjct: 361 GGPIHVRF 368
>ref|NP_001122387.1| 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial isoform 2
precursor [Homo sapiens].
Length = 448
Score = 154 bits (388), Expect = 3e-37
Identities = 95/333 (28%), Positives = 169/333 (50%), Gaps = 2/333 (0%)
Frame = +3
Query: 24 LFKFEGPNPERYNIPPWVAYHQHYQKPVGVLLKKSGAWKKDRLVLNTEVMAPEAIKNFIP 203
L++ E P+R I PW AY + ++ G+L+ + W++ R ++M P +
Sbjct: 118 LYRTESAYPQRLEIKPWKAYRDYRKEGYGLLILEGEDWQRVRSAFQKKLMKPGEVMKLDN 177
Query: 204 LLDTVSQDFVGVLHRRIKQQGSGKFSGDIREDLFRFAFESITNVIFGERLGMLEEIVDPE 383
++ V DF+G + ++G + D+ +L +++FESI V++ +R G+L++ E
Sbjct: 178 KINEVLADFMGRIDELCDERGHVE---DLYSELNKWSFESICLVLYEKRFGLLQKNAGDE 234
Query: 384 AQKFIDAVYQMFHTSVPMLNLPPDLFRLFRTKTWRDHVAAWDTIFNKAEKYTQNFYWDLR 563
A FI A+ M T M+ P +L + TK W+DH AWDTIF + N
Sbjct: 235 AVNFIMAIKTMMSTFGRMMVTPVELHKSLNTKVWQDHTLAWDTIFKSVKACIDN------ 288
Query: 564 RKREFNNYPG--ILYRLLGNDKLLSEDVKANVTEMLAGGVDTTSMTLQWHLYEMARSLNV 737
R +++ P L + ++L +++ A VTE+ V+TT+ +L W LY ++R+ V
Sbjct: 289 RLEKYSQQPSADFLCDIYHQNRLSKKELYAAVTELQLAAVETTANSLMWILYNLSRNPQV 348
Query: 738 QEMLREEVLNARRQAQGDTSKMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDYM 917
Q+ L +E+ + + Q ++ L+ +P LKA +KE++RL P R L VL +Y
Sbjct: 349 QQKLLKEIQSVLPENQVPRAEDLRNMPYLKACLKESMRLTPSVPFTTRTLDKATVLGEYA 408
Query: 918 IPAKTLVQVAVYAMGRDPAFFSNPGQFDPTRWL 1016
+P + + + A +P + G P+R L
Sbjct: 409 LPKGIVRKYDIQATDNEPVEMLHSGTLVPSREL 441
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 62,016,076
Number of extensions: 1815678
Number of successful extensions: 6368
Number of sequences better than 1.0e-05: 74
Number of HSP's gapped: 6261
Number of HSP's successfully gapped: 74
Length of query: 475
Length of database: 18,297,164
Length adjustment: 106
Effective length of query: 369
Effective length of database: 14,802,980
Effective search space: 5462299620
Effective search space used: 5462299620
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-006990
(1427 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_062753.3| cholesterol side-chain cleavage enzyme, mitocho... 655 0.0
Alignment gi|NP_034121.3| cytochrome P450 11B2, mitochondrial [Mus muscul... 308 5e-84
Alignment gi|NP_001028401.2| cytochrome P450, family 11, subfamily b, pol... 298 9e-81
Alignment gi|NP_034126.1| 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mito... 207 2e-53
Alignment gi|NP_034139.2| 25-hydroxyvitamin D-1 alpha hydroxylase, mitoch... 207 2e-53
Alignment gi|NP_077226.2| sterol 26-hydroxylase, mitochondrial [Mus muscu... 198 8e-51
Alignment gi|NP_031845.1| cytochrome P450 3A13 [Mus musculus]. 114 1e-25
Alignment gi|NP_031844.1| cytochrome P450 3A11 [Mus musculus]. 105 7e-23
Alignment gi|NP_796354.1| cytochrome P450, family 3, subfamily a, polypep... 105 7e-23
Alignment gi|NP_059092.2| cytochrome P450 3A41 [Mus musculus]. 101 1e-21
>ref|NP_062753.3| cholesterol side-chain cleavage enzyme, mitochondrial precursor [Mus
musculus].
Length = 526
Score = 655 bits (1690), Expect = 0.0
Identities = 310/414 (74%), Positives = 363/414 (87%)
Frame = +3
Query: 3 DPEDVALLFKFEGPNPERYNIPPWVAYHQHYQKPVGVLLKKSGAWKKDRLVLNTEVMAPE 182
DP+D ++LF EGPNPER+ +PPWVAYHQ+YQ+P+GVL K S AWKKDR+VLN EVMAP
Sbjct: 100 DPKDASILFSCEGPNPERFLVPPWVAYHQYYQRPIGVLFKSSDAWKKDRIVLNQEVMAPG 159
Query: 183 AIKNFIPLLDTVSQDFVGVLHRRIKQQGSGKFSGDIREDLFRFAFESITNVIFGERLGML 362
AIKNF+PLL+ V+QDF+ VLHRRIKQQ SG FSG I +DLFRF+FESI++VIFGER+GML
Sbjct: 160 AIKNFVPLLEGVAQDFIKVLHRRIKQQNSGNFSGVISDDLFRFSFESISSVIFGERMGML 219
Query: 363 EEIVDPEAQKFIDAVYQMFHTSVPMLNLPPDLFRLFRTKTWRDHVAAWDTIFNKAEKYTQ 542
EEIVDPEAQ+FI+AVYQMFHTSVPMLNLPPD FRL RTKTW+DH AAWD IFNKA++YTQ
Sbjct: 220 EEIVDPEAQRFINAVYQMFHTSVPMLNLPPDFFRLLRTKTWKDHAAAWDVIFNKADEYTQ 279
Query: 543 NFYWDLRRKREFNNYPGILYRLLGNDKLLSEDVKANVTEMLAGGVDTTSMTLQWHLYEMA 722
NFYWDLR+KR+F+ YPG+LY LLG +KL ++++AN+TEMLAGGVDTTSMTLQW+LYEMA
Sbjct: 280 NFYWDLRQKRDFSQYPGVLYSLLGGNKLPFKNIQANITEMLAGGVDTTSMTLQWNLYEMA 339
Query: 723 RSLNVQEMLREEVLNARRQAQGDTSKMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLV 902
+L VQEMLR EVL ARRQAQGD +KM+QLVPLLKASIKETLRLHPISVTLQRY VNDLV
Sbjct: 340 HNLKVQEMLRAEVLAARRQAQGDMAKMVQLVPLLKASIKETLRLHPISVTLQRYTVNDLV 399
Query: 903 LRDYMIPAKTLVQVAVYAMGRDPAFFSNPGQFDPTRWLGKERDLIHFRNLGFGWGVRQCV 1082
LR+Y IPAKTLVQVA +AMGRDP FF NP +FDPTRWL K ++ HFR LGFGWGVRQC+
Sbjct: 400 LRNYKIPAKTLVQVASFAMGRDPGFFPNPNKFDPTRWLEKSQNTTHFRYLGFGWGVRQCL 459
Query: 1083 GRRIAELEMTLFLIHILENFKVELQHFSDVDTIFNLILMPDKPIFLVFRPFNQD 1244
GRRIAELEMT+ LI++LENF++E+Q+ DV T F+LILMP+ PI F+P QD
Sbjct: 460 GRRIAELEMTILLINLLENFRIEVQNLRDVGTKFSLILMPENPILFNFQPLKQD 513
>ref|NP_034121.3| cytochrome P450 11B2, mitochondrial [Mus musculus].
Length = 502
Score = 308 bits (790), Expect = 5e-84
Identities = 162/409 (39%), Positives = 247/409 (60%)
Frame = +3
Query: 6 PEDVALLFKFEGPNPERYNIPPWVAYHQHYQKPVGVLLKKSGAWKKDRLVLNTEVMAPEA 185
PED L + E P R ++ PWVA+ + GV L W+ +RL LN V++P+A
Sbjct: 96 PEDAEKLHQVESMLPRRMHLEPWVAHRELRGLRRGVFLLNGPEWRLNRLRLNRNVLSPKA 155
Query: 186 IKNFIPLLDTVSQDFVGVLHRRIKQQGSGKFSGDIREDLFRFAFESITNVIFGERLGMLE 365
++ F+P++D V++DF+ L ++ Q G + D+++ LF + E+ +FGERLG+L
Sbjct: 156 VQKFVPMVDMVARDFLETLKEKVLQNARGSLTMDVQQSLFNYTIEASNFALFGERLGLLG 215
Query: 366 EIVDPEAQKFIDAVYQMFHTSVPMLNLPPDLFRLFRTKTWRDHVAAWDTIFNKAEKYTQN 545
+ P + KFI A++ MF ++ +L LP L R T+ W++H AWD I A +
Sbjct: 216 HDLSPGSLKFIHALHSMFKSTSQLLFLPKSLTRWTSTRVWKEHFDAWDVISEYANRCIWK 275
Query: 546 FYWDLRRKREFNNYPGILYRLLGNDKLLSEDVKANVTEMLAGGVDTTSMTLQWHLYEMAR 725
+ +LR Y GI+ L+ L + +KAN E+ AG VDTT++ L L+E+AR
Sbjct: 276 VHQELRLGSS-QTYSGIVAELISQGSLPLDAIKANSMELTAGSVDTTAIPLVMTLFELAR 334
Query: 726 SLNVQEMLREEVLNARRQAQGDTSKMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVL 905
+ +VQ+ LR+E L A + K + +PLL+A++KETLRL+P+ L+R L +DLVL
Sbjct: 335 NPDVQKALRQESLAAEASIAANPQKAMSDLPLLRAALKETLRLYPVGGFLERILSSDLVL 394
Query: 906 RDYMIPAKTLVQVAVYAMGRDPAFFSNPGQFDPTRWLGKERDLIHFRNLGFGWGVRQCVG 1085
++Y +PA TLV + +Y+MGR+PA F P ++ P RWL ++R F++L FG+GVRQC+G
Sbjct: 395 QNYHVPAGTLVLLYLYSMGRNPAVFPRPERYMPQRWLERKRS---FQHLAFGFGVRQCLG 451
Query: 1086 RRIAELEMTLFLIHILENFKVELQHFSDVDTIFNLILMPDKPIFLVFRP 1232
RR+AE+EM L L HIL+ F+VE DV + +LMP L FRP
Sbjct: 452 RRLAEVEMMLLLHHILKTFQVETLRQEDVQMAYRFVLMPSSSPVLTFRP 500
>ref|NP_001028401.2| cytochrome P450, family 11, subfamily b, polypeptide 1 [Mus
musculus].
Length = 501
Score = 298 bits (762), Expect = 9e-81
Identities = 155/411 (37%), Positives = 245/411 (59%)
Frame = +3
Query: 6 PEDVALLFKFEGPNPERYNIPPWVAYHQHYQKPVGVLLKKSGAWKKDRLVLNTEVMAPEA 185
PEDV L++ E +P R + W+ + + GV L W +RL LN V++P+A
Sbjct: 96 PEDVEKLYQVESTHPCRMPLESWIVHRELRGLGRGVFLLNGPEWYFNRLQLNPNVLSPKA 155
Query: 186 IKNFIPLLDTVSQDFVGVLHRRIKQQGSGKFSGDIREDLFRFAFESITNVIFGERLGMLE 365
++ F+PL+D +++DFV L +++ + G FS D + +F + E+ V+FGERLG++
Sbjct: 156 VQKFVPLVDGIARDFVDNLKKKMLESVHGSFSMDFQSSVFNYTIEASHFVLFGERLGLIG 215
Query: 366 EIVDPEAQKFIDAVYQMFHTSVPMLNLPPDLFRLFRTKTWRDHVAAWDTIFNKAEKYTQN 545
+ P++ KF+ ++ MF T+ +L LP L R T+ W++++ +WD I K +N
Sbjct: 216 RDLSPDSLKFLHTLHSMFKTTTQLLYLPRSLTRWTSTRVWKENLESWDFISEYVTKCIKN 275
Query: 546 FYWDLRRKREFNNYPGILYRLLGNDKLLSEDVKANVTEMLAGGVDTTSMTLQWHLYEMAR 725
Y +L R + L+ L + ++AN E++AG DTTS L +E+AR
Sbjct: 276 VYRELAEGRP--QSWSVTAELVAERTLSMDAIQANSMELIAGSTDTTSTPLVMTFFELAR 333
Query: 726 SLNVQEMLREEVLNARRQAQGDTSKMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVL 905
+ +VQ+ LR+E L A + K + +PLL+A++KETLRL+P+ L+R L +DLVL
Sbjct: 334 NPDVQQALRQESLAAEASIAANPQKAMSDLPLLRAALKETLRLYPVGTFLERILSSDLVL 393
Query: 906 RDYMIPAKTLVQVAVYAMGRDPAFFSNPGQFDPTRWLGKERDLIHFRNLGFGWGVRQCVG 1085
++Y +PA T++ V +Y+MGR+PA F P ++ P RWL ++R F++L FG+GVRQC+G
Sbjct: 394 QNYHVPAGTVLNVNLYSMGRNPAVFPRPERYMPQRWLERKRS---FKHLAFGFGVRQCLG 450
Query: 1086 RRIAELEMTLFLIHILENFKVELQHFSDVDTIFNLILMPDKPIFLVFRPFN 1238
RR+AE EM L L H+L++F VE Q DV + +LMP L FRP N
Sbjct: 451 RRLAEAEMMLLLHHVLKSFHVETQEKEDVRMAYRFVLMPSSSPLLTFRPVN 501
>ref|NP_034126.1| 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial precursor
[Mus musculus].
Length = 514
Score = 207 bits (526), Expect = 2e-53
Identities = 122/411 (29%), Positives = 211/411 (51%), Gaps = 2/411 (0%)
Frame = +3
Query: 6 PEDVALLFKFEGPNPERYNIPPWVAYHQHYQKPVGVLLKKSGAWKKDRLVLNTEVMAPEA 185
P + L++ E +P+R I PW AY H + G+++ + W++ R ++M P
Sbjct: 112 PSLLEALYRTESAHPQRLEIKPWKAYRDHRNEAYGLMILEGQEWQRVRSAFQKKLMKPVE 171
Query: 186 IKNFIPLLDTVSQDFVGVLHRRIKQQGSGKFSGDIREDLFRFAFESITNVIFGERLGMLE 365
I ++ V DF+G + ++G + D+ +L +++FESI V++ +R G+L+
Sbjct: 172 IMKLDKKINEVLADFMGQIDELRDERGRIQ---DLYSELNKWSFESICLVLYEKRFGLLQ 228
Query: 366 EIVDPEAQKFIDAVYQMFHTSVPMLNLPPDLFRLFRTKTWRDHVAAWDTIFNKAEKYTQN 545
+ + EA FI A+ M T M+ P +L + TK W+ H AWDTIF + +
Sbjct: 229 KDTEEEALTFIAAIKTMMSTFGKMMVTPVELHKRLNTKVWQAHTLAWDTIFKSVKPCIDH 288
Query: 546 FYWDLRRKREFNNYPG--ILYRLLGNDKLLSEDVKANVTEMLAGGVDTTSMTLQWHLYEM 719
R ++ PG L + D L +++ A VTE+ V+TT+ +L W LY +
Sbjct: 289 ------RLERYSQQPGADFLCDIYQQDHLSKKELYAAVTELQLAAVETTANSLMWILYNL 342
Query: 720 ARSLNVQEMLREEVLNARRQAQGDTSKMLQLVPLLKASIKETLRLHPISVTLQRYLVNDL 899
+R+ VQ+ L E+ + Q ++ ++ +P LKA +KE++RL P R L
Sbjct: 343 SRNPQVQQRLLREIQSVLPDNQTPRAEDVRNMPYLKACLKESMRLTPSVPFTTRTLDKPT 402
Query: 900 VLRDYMIPAKTLVQVAVYAMGRDPAFFSNPGQFDPTRWLGKERDLIHFRNLGFGWGVRQC 1079
VL +Y +P T++ + +G F + +F P RWL KE+ + F +L FG G R C
Sbjct: 403 VLGEYTLPKGTVLTLNTQVLGSSEDNFEDADKFRPERWLEKEKKINPFAHLPFGVGKRMC 462
Query: 1080 VGRRIAELEMTLFLIHILENFKVELQHFSDVDTIFNLILMPDKPIFLVFRP 1232
+GRR+AEL++ L L I++ + + V+ + IL+P + + + F P
Sbjct: 463 IGRRLAELQLHLALCWIIQKYNIVATDSEPVEMLHLGILVPSRELPIAFCP 513
>ref|NP_034139.2| 25-hydroxyvitamin D-1 alpha hydroxylase, mitochondrial [Mus
musculus].
Length = 507
Score = 207 bits (526), Expect = 2e-53
Identities = 138/417 (33%), Positives = 213/417 (51%), Gaps = 9/417 (2%)
Frame = +3
Query: 3 DPEDVALLFKFEGPNPERYNIPPWVAYHQHYQKPVGVLLKKSGAWKKDRLVLNTEVMAPE 182
DP V L + E PER + W + + +Q+ G+L W++ R +L ++ P+
Sbjct: 90 DPTLVEQLLRQESHCPERCSFSSWAEHRRRHQRACGLLTADGEEWQRLRSLLAPLLLRPQ 149
Query: 183 AIKNFIPLLDTVSQDFVGVLHRRIKQQGSGK--FSGDIREDLFRFAFESITNVIFGERLG 356
A + LD V +D V L RR + +GSG D+ + ++F ESI V+ G RLG
Sbjct: 150 AAAGYAGTLDNVVRDLVRRL-RRQRGRGSGLPGLVLDVAGEFYKFGLESIGAVLLGSRLG 208
Query: 357 MLEEIVDPEAQKFIDAVYQMFHTSVPMLNLPPDLFRLFRTKTWRDHVAAWDTIFNKAEKY 536
LE V P+ + FI AV +F +++ + +P L L W WD +F A+++
Sbjct: 209 CLEAEVPPDTETFIHAVGSVFVSTLLTMAMPNWLHHLI-PGPWARLCRDWDQMFAFAQRH 267
Query: 537 TQNFYWDLRRKREFNNYPGI-----LYRLLGNDKLLSEDVKANVTEMLAGGVDTTSMTLQ 701
+ + + + + L L +K+ + + NVTE+L GVDT S TL
Sbjct: 268 VELREGEAAMRNQGKPEEDMPSGHHLTHFLFREKVSVQSIVGNVTELLLAGVDTVSNTLS 327
Query: 702 WHLYEMARSLNVQEMLREEVL-NARRQAQGDTSKMLQLVPLLKASIKETLRLHPISVTLQ 878
W LYE++R +VQ L E+ R L +PLLKA IKE LRL+P+
Sbjct: 328 WTLYELSRHPDVQTALHSEITAGTRGSCAHPHGTALSQLPLLKAVIKEVLRLYPVVPGNS 387
Query: 879 RYLVNDLVLRDYMIPAKTLVQVAVYAMGRDPAFFSNPGQFDPTRWLGKERDLIHFRNLGF 1058
R D+ + +Y+IP TLV + YA RDP F +P F+P RWLG+ F +L F
Sbjct: 388 RVPDRDIRVGNYVIPQDTLVSLCHYATSRDPTQFPDPNSFNPARWLGEGPTPHPFASLPF 447
Query: 1059 GWGVRQCVGRRIAELEMTLFLIHILENFKVELQHFS-DVDTIFNLILMPDKPIFLVF 1226
G+G R C+GRR+AELE+ + L IL +F+V + + + + +L+P++ I L F
Sbjct: 448 GFGKRSCIGRRLAELELQMALSQILTHFEVLPEPGALPIKPMTRTVLVPERSINLQF 504
>ref|NP_077226.2| sterol 26-hydroxylase, mitochondrial [Mus musculus].
Length = 533
Score = 198 bits (504), Expect = 8e-51
Identities = 127/409 (31%), Positives = 205/409 (50%), Gaps = 12/409 (2%)
Frame = +3
Query: 36 EGPNPERYNIPPWVAYHQHYQKPVGVLLKKSGAWKKDRLVLNTEVMAPEAIKNFIPLLDT 215
EG P R ++ W + H G+ + + W R L ++ P+ + L+
Sbjct: 123 EGKYPIRDHMDQWKDHRDHKGLTYGIFIAQGEQWYHLRQALKQRLLKPDEAALYTDALNE 182
Query: 216 VSQDFVGVLHRRIKQQGSGKFSGDIREDLFRFAFESITNVIFGERLGMLEEIVDPEAQKF 395
V DF+ L + + SG D+ L+ A E+IT ++F +R+G L+ + + F
Sbjct: 183 VISDFITRLDQVRAESESGDQVPDMAHLLYHLALEAITYILFEKRIGCLKPSIPEDTAAF 242
Query: 396 IDAVYQMFHTSVPMLNLPPDLFRLFRTKTWRDHVAAWDTIFNKAEKYTQNFYWDLRRKRE 575
I +V MF SV + LP L W+ ++ WD IF+ +K +L+ + +
Sbjct: 243 IRSVAIMFQNSVYITFLPKWTRPLL--PFWKRYLNGWDNIFSFGKKLIDEKVQELKAQLQ 300
Query: 576 FNNYPGI-----LYRLLGNDKLLSEDVKANVTEMLAGGVDTTSMTLQWHLYEMARSLNVQ 740
G+ L+ LL N+ L +++ E+L GVDTTS TL W LY +++S +Q
Sbjct: 301 ETGPDGVRVSGYLHFLLTNELLSTQETIGTFPELLLAGVDTTSNTLTWALYHLSKSPEIQ 360
Query: 741 EMLREEVLNARRQAQGDTSKMLQLVPLLKASIKETLRLHPISVTLQRYLV-NDLVLRDYM 917
E L +EV + K +PLLKA IKETLRL+P+ T R + + + ++
Sbjct: 361 EALHKEVTGVVPFGKVPQHKDFAHMPLLKAVIKETLRLYPVVPTNSRIITEKETEINGFL 420
Query: 918 IPAKTLVQVAVYAMGRDPAFFSNPGQFDPTRWLGKER----DLIH-FRNLGFGWGVRQCV 1082
P T + Y + RDP+ F P F P RWL K+ ++H F ++ FG+GVR C+
Sbjct: 421 FPKNTQFVLCHYVVSRDPSVFPEPNSFQPHRWLRKKEADNPGILHPFGSVPFGYGVRSCL 480
Query: 1083 GRRIAELEMTLFLIHILENFKVEL-QHFSDVDTIFNLILMPDKPIFLVF 1226
GRRIAELEM L L +++ +++ L +V T+ ++L+P K + L F
Sbjct: 481 GRRIAELEMQLMLSRLVQKYEIALAPGMGEVKTVSRIVLVPSKKVRLHF 529
>ref|NP_031845.1| cytochrome P450 3A13 [Mus musculus].
Length = 503
Score = 114 bits (286), Expect = 1e-25
Identities = 100/392 (25%), Positives = 184/392 (46%), Gaps = 19/392 (4%)
Frame = +3
Query: 102 PVGVLLK-----KSGAWKKDRLVLNTEVMAPEAIKNFIPLLDTVSQDFVGVLHRRIKQQG 266
PVG+L K ++ WK+ R +L+ + +K P+++ F VL R ++Q G
Sbjct: 110 PVGILKKAISISENEEWKRIRALLSPTFTSGR-LKEMFPIIN----QFTDVLVRNMRQ-G 163
Query: 267 SGKFSGDIREDLF-RFAFESITNVIFGERLGMLEEIVDPEAQKFIDA----VYQMFHTSV 431
G+ +D+F ++ + IT FG + L DP +K ++ SV
Sbjct: 164 LGEGKPTSMKDIFGAYSMDVITATSFGVNIDSLNNPQDPFVEKIKKLLKFDIFDPLFLSV 223
Query: 432 PMLNLPPDLFRLFRTKTWRDHVAAWDTIFNKAEKYTQNFYWDLRRKREFNNYPGIL---- 599
+ +F + V ++ T E+ +N + ++R ++ ++
Sbjct: 224 TLFPFLTPVFDALNVSLFPRDVISFFT--TSVERMKENRMKEKEKQRV--DFLQLMINSQ 279
Query: 600 -YRLLGNDKLLSE-DVKANVTEMLAGGVDTTSMTLQWHLYEMARSLNVQEMLREEVLNAR 773
Y+ + K LS+ ++ A + G +TTS L + LY +A +VQ+ L++E+ A
Sbjct: 280 NYKTKESHKALSDVEIVAQSVIFIFAGYETTSSALSFALYLLAIHPDVQKKLQDEIDAAL 339
Query: 774 RQAQGDTSKMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQVAVY 953
T L + L + ETLRL+PI+ L+R D+ + IP T+V + +
Sbjct: 340 PNKAPATYDTLLQMEYLDMVVNETLRLYPIAGRLERVCKTDVEINGLFIPKGTVVMIPTF 399
Query: 954 AMGRDPAFFSNPGQFDPTRWLGKERDLIH-FRNLGFGWGVRQCVGRRIAELEMTLFLIHI 1130
A+ +DP ++ P +F P R+ K +D I+ + L FG G R C+G R A + M + L+ +
Sbjct: 400 ALHKDPKYWPEPEEFRPERFSKKNQDSINPYMYLPFGSGPRNCIGMRFALINMKVALVRV 459
Query: 1131 LENFKVELQHFSDVDTIFNL--ILMPDKPIFL 1220
L+NF V+ +++ + +L P+ P+ L
Sbjct: 460 LQNFTVQPCKETEIPLKLSKQGLLQPENPLLL 491
>ref|NP_031844.1| cytochrome P450 3A11 [Mus musculus].
Length = 504
Score = 105 bits (263), Expect = 7e-23
Identities = 99/406 (24%), Positives = 179/406 (44%), Gaps = 29/406 (7%)
Frame = +3
Query: 102 PVGVLLK-----KSGAWKKDRLVLNTEVMAPEAIKNFIPLLDTVSQDFVGVLHRRIKQQG 266
PVG++ K K WK+ R +L+ + + +K P+++ V L ++ K+
Sbjct: 110 PVGIMSKAISISKDDEWKRYRALLSPTFTSGK-LKEMFPVIEQYGDILVKYLRQKAKK-- 166
Query: 267 SGKFSGDIREDLFRFAFESITNVIFGERLGMLEEIVDPEAQK------------------ 392
GK +++ L ++ + IT+ FG + L DP +K
Sbjct: 167 -GK-PVTMKDVLGAYSMDVITSTSFGVNVDSLNNPEDPFVEKAKKLLRFDFFDPLLFSVV 224
Query: 393 ---FIDAVYQMFHTSVPMLNLPPDLFRLFRTKTWRDHVAAWDTIFNKAEKYTQNFYWDLR 563
F+ VY+M + + P D F+ R + D+ +K+ +F L
Sbjct: 225 LFPFLTPVYEMLNICM----FPKDSIEFFKKFVDRMKESRLDS----KQKHRVDFL-QLM 275
Query: 564 RKREFNNYPGILYRLLGNDKLLSEDVKANVTEMLAGGVDTTSMTLQWHLYEMARSLNVQE 743
N+ + ++ L + ++ ++ + + G +TTS TL + L+ +A ++Q+
Sbjct: 276 MNSHNNSKDKVSHKALSDMEITAQSII-----FIFAGYETTSSTLSFTLHSLATHPDIQK 330
Query: 744 MLREEVLNARRQAQGDTSKMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDYMIP 923
L++E+ A T + + L + ETLRL+PI+ L+R D+ L IP
Sbjct: 331 KLQDEIDEALPNKAPPTYDTVMEMEYLDMVLNETLRLYPIANRLERVCKKDVELNGVYIP 390
Query: 924 AKTLVQVAVYAMGRDPAFFSNPGQFDPTRWLGKERDLIH-FRNLGFGWGVRQCVGRRIAE 1100
+ V + YA+ DP +S P +F P R+ + + I + L FG G R C+G R A
Sbjct: 391 KGSTVMIPSYALHHDPQHWSEPEEFQPERFSKENKGSIDPYVYLPFGNGPRNCLGMRFAL 450
Query: 1101 LEMTLFLIHILENFKVELQHFSDVDTIFNL--ILMPDKPIFLVFRP 1232
+ M L L I++NF + + + + +L P+KPI L P
Sbjct: 451 MNMKLALTKIMQNFSFQPCKETQIPLKLSRQGLLQPEKPIVLKVVP 496
>ref|NP_796354.1| cytochrome P450, family 3, subfamily a, polypeptide 44 [Mus
musculus].
Length = 504
Score = 105 bits (263), Expect = 7e-23
Identities = 98/402 (24%), Positives = 178/402 (44%), Gaps = 25/402 (6%)
Frame = +3
Query: 102 PVGVLLK-----KSGAWKKDRLVLNTEVMAPEAIKNFIPLLDTVSQDFVGVLHRRIKQQG 266
PVG++ K K WK+ R +L+ + +K P+++ + +L + ++Q+
Sbjct: 110 PVGIMSKAISISKDEEWKRYRALLSPTFTSGR-LKEMFPVIE----QYGDILVKYLRQEA 164
Query: 267 SGKFSGDIREDLFRFAFESITNVIFGERLGMLEEIVDP---EAQKFIDA----------- 404
+++ L ++ + IT+ FG + L DP EA+KF+
Sbjct: 165 EKGMPVAMKDVLGAYSMDVITSTSFGVNVDSLNNPEDPFVEEAKKFLRVDFFDPLLFSVV 224
Query: 405 VYQMFHTSVPMLNL---PPDLFRLFRTKTWRDHVAAWDTIFNKAEKYTQNFYWDLRRKRE 575
++ + MLN+ P D F+ R + D+ +K+ +F L
Sbjct: 225 LFPLLTPVYEMLNICMFPNDSIEFFKKFVDRMQESRLDS----NQKHRVDFL-QLMMNSH 279
Query: 576 FNNYPGILYRLLGNDKLLSEDVKANVTEMLAGGVDTTSMTLQWHLYEMARSLNVQEMLRE 755
N+ ++ N ++ + + ++ G +TTS TL + LY +A ++Q+ L+
Sbjct: 280 NNSKDKDSHKAFSNMEITVQSII-----FISAGYETTSSTLSFTLYCLATHPDIQKKLQA 334
Query: 756 EVLNARRQAQGDTSKMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDYMIPAKTL 935
E+ A T + + L + ETLRL+PI L+R D+ L IP ++
Sbjct: 335 EIDKALPNKATPTCDTVMEMEYLDMVLNETLRLYPIVTRLERVCKKDVELNGVYIPKGSM 394
Query: 936 VQVAVYAMGRDPAFFSNPGQFDPTRWLGKERDLIH-FRNLGFGWGVRQCVGRRIAELEMT 1112
V + YA+ DP + +P +F P R+ + + I + L FG G R C+G R A + M
Sbjct: 395 VMIPSYALHHDPQHWPDPEEFQPERFSKENKGSIDPYVYLPFGIGPRNCIGMRFALMNMK 454
Query: 1113 LFLIHILENFKVELQHFSDVDTIFNL--ILMPDKPIFLVFRP 1232
L + +L+NF + + + + IL P+KPI L P
Sbjct: 455 LAVTKVLQNFSFQPCQETQIPLKLSRQGILQPEKPIVLKVVP 496
>ref|NP_059092.2| cytochrome P450 3A41 [Mus musculus].
Length = 504
Score = 101 bits (252), Expect = 1e-21
Identities = 94/406 (23%), Positives = 175/406 (43%), Gaps = 29/406 (7%)
Frame = +3
Query: 102 PVGVLLK-----KSGAWKKDRLVLNTEVMAPEAIKNFIPLLDTVSQDFVGVLHRRIKQQG 266
PVG++ K K WK+ R +L+ + + +K P+++ + +L + + Q+
Sbjct: 110 PVGIMSKAISISKDEEWKRYRALLSPTFTSGK-LKEMFPVIE----QYGDILVKYLMQEA 164
Query: 267 SGKFSGDIREDLFRFAFESITNVIFGERLGMLEEIVDPEAQK------------------ 392
+++ L ++ + IT+ FG + L DP +K
Sbjct: 165 EKGKPVTMKDVLGAYSIDVITSTSFGVNVDSLNNPEDPFVEKAKGILRVDFFDPLVFSVV 224
Query: 393 ---FIDAVYQMFHTSVPMLNLPPDLFRLFRTKTWRDHVAAWDTIFNKAEKYTQNFYWDLR 563
F+ VY+M + + P D F+ R + D+ +K+ +F L
Sbjct: 225 LFPFLTPVYEMLNICM----FPKDSIEFFKKFVNRMKESRLDS----KQKHRVDFL-QLM 275
Query: 564 RKREFNNYPGILYRLLGNDKLLSEDVKANVTEMLAGGVDTTSMTLQWHLYEMARSLNVQE 743
N+ ++ L + ++ ++ + + G +TTS TL + LY +A ++Q+
Sbjct: 276 MNAHNNSKDKDSHKALSDMEITAQSIV-----FIFAGYETTSSTLSFTLYCLATHPDIQK 330
Query: 744 MLREEVLNARRQAQGDTSKMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDYMIP 923
L+EE+ T + + L + ETLRL+PI L+R+ D+ L IP
Sbjct: 331 KLQEEIDETLPNKAPPTYDTVMEMEYLDMVLNETLRLYPIGNRLERFCKKDVELNGVYIP 390
Query: 924 AKTLVQVAVYAMGRDPAFFSNPGQFDPTRWLGKERDLIH-FRNLGFGWGVRQCVGRRIAE 1100
+ V + YA+ DP + P +F P R+ + + I + + FG G R C+G R A
Sbjct: 391 KGSTVMIPSYALHHDPQHWPEPEEFQPERFSKENKGSIDPYLYMPFGIGPRNCIGMRFAF 450
Query: 1101 LEMTLFLIHILENFKVELQHFSDVDTIFNL--ILMPDKPIFLVFRP 1232
+ M L L +++NF + + + + +L P+KPI L P
Sbjct: 451 MTMKLALTKVMQNFSFQPCQETQIPLKLSRQGLLQPEKPIVLKVVP 496
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 52,254,905
Number of extensions: 1502530
Number of successful extensions: 5279
Number of sequences better than 1.0e-05: 102
Number of HSP's gapped: 5139
Number of HSP's successfully gapped: 102
Length of query: 475
Length of database: 15,617,559
Length adjustment: 105
Effective length of query: 370
Effective length of database: 12,463,779
Effective search space: 4611598230
Effective search space used: 4611598230
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-006990
(1427 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_999592.1| cholesterol side-chain cleavage enzyme, mitocho... 850 0.0
Alignment gi|NP_999160.1| 25-hydroxyvitamin D-1 alpha hydroxylase, mitoch... 214 1e-55
Alignment gi|NP_999240.2| 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mito... 201 8e-52
Alignment gi|NP_001230233.1| sterol 26-hydroxylase, mitochondrial precurs... 187 2e-47
Alignment gi|NP_999588.1| cytochrome P450 3A29 [Sus scrofa]. 104 1e-22
Alignment gi|NP_999587.1| cytochrome P450 3A39 [Sus scrofa]. 100 3e-21
Alignment gi|NP_001128296.1| cytochrome P450 3A46 [Sus scrofa]. 100 3e-21
Alignment gi|NP_001182438.1| cytochrome P450, subfamily IIIA, polypeptide... 98 1e-20
Alignment gi|NP_999211.1| thromboxane-A synthase [Sus scrofa]. 89 5e-18
Alignment gi|XP_003354173.1| PREDICTED: cytochrome P450 4F22-like [Sus sc... 86 5e-17
>ref|NP_999592.1| cholesterol side-chain cleavage enzyme, mitochondrial precursor [Sus
scrofa].
Length = 520
Score = 850 bits (2197), Expect = 0.0
Identities = 418/418 (100%), Positives = 418/418 (100%)
Frame = +3
Query: 3 DPEDVALLFKFEGPNPERYNIPPWVAYHQHYQKPVGVLLKKSGAWKKDRLVLNTEVMAPE 182
DPEDVALLFKFEGPNPERYNIPPWVAYHQHYQKPVGVLLKKSGAWKKDRLVLNTEVMAPE
Sbjct: 103 DPEDVALLFKFEGPNPERYNIPPWVAYHQHYQKPVGVLLKKSGAWKKDRLVLNTEVMAPE 162
Query: 183 AIKNFIPLLDTVSQDFVGVLHRRIKQQGSGKFSGDIREDLFRFAFESITNVIFGERLGML 362
AIKNFIPLLDTVSQDFVGVLHRRIKQQGSGKFSGDIREDLFRFAFESITNVIFGERLGML
Sbjct: 163 AIKNFIPLLDTVSQDFVGVLHRRIKQQGSGKFSGDIREDLFRFAFESITNVIFGERLGML 222
Query: 363 EEIVDPEAQKFIDAVYQMFHTSVPMLNLPPDLFRLFRTKTWRDHVAAWDTIFNKAEKYTQ 542
EEIVDPEAQKFIDAVYQMFHTSVPMLNLPPDLFRLFRTKTWRDHVAAWDTIFNKAEKYTQ
Sbjct: 223 EEIVDPEAQKFIDAVYQMFHTSVPMLNLPPDLFRLFRTKTWRDHVAAWDTIFNKAEKYTQ 282
Query: 543 NFYWDLRRKREFNNYPGILYRLLGNDKLLSEDVKANVTEMLAGGVDTTSMTLQWHLYEMA 722
NFYWDLRRKREFNNYPGILYRLLGNDKLLSEDVKANVTEMLAGGVDTTSMTLQWHLYEMA
Sbjct: 283 NFYWDLRRKREFNNYPGILYRLLGNDKLLSEDVKANVTEMLAGGVDTTSMTLQWHLYEMA 342
Query: 723 RSLNVQEMLREEVLNARRQAQGDTSKMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLV 902
RSLNVQEMLREEVLNARRQAQGDTSKMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLV
Sbjct: 343 RSLNVQEMLREEVLNARRQAQGDTSKMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLV 402
Query: 903 LRDYMIPAKTLVQVAVYAMGRDPAFFSNPGQFDPTRWLGKERDLIHFRNLGFGWGVRQCV 1082
LRDYMIPAKTLVQVAVYAMGRDPAFFSNPGQFDPTRWLGKERDLIHFRNLGFGWGVRQCV
Sbjct: 403 LRDYMIPAKTLVQVAVYAMGRDPAFFSNPGQFDPTRWLGKERDLIHFRNLGFGWGVRQCV 462
Query: 1083 GRRIAELEMTLFLIHILENFKVELQHFSDVDTIFNLILMPDKPIFLVFRPFNQDPLQA 1256
GRRIAELEMTLFLIHILENFKVELQHFSDVDTIFNLILMPDKPIFLVFRPFNQDPLQA
Sbjct: 463 GRRIAELEMTLFLIHILENFKVELQHFSDVDTIFNLILMPDKPIFLVFRPFNQDPLQA 520
>ref|NP_999160.1| 25-hydroxyvitamin D-1 alpha hydroxylase, mitochondrial [Sus scrofa].
Length = 504
Score = 214 bits (544), Expect = 1e-55
Identities = 141/420 (33%), Positives = 215/420 (51%), Gaps = 13/420 (3%)
Frame = +3
Query: 6 PEDVALLFKFEGPNPERYNIPPWVAYHQHYQKPVGVLLKKSGAWKKDRLVLNTEVMAPEA 185
P V L + EGP PER + PW + + Q+ G+L + W++ R +L ++ P+A
Sbjct: 87 PTLVEQLLRQEGPLPERCSFSPWTEHRRRRQRSCGLLTAEGEEWQRLRSLLAPLLLRPQA 146
Query: 186 IKNFIPLLDTVSQDFVGVLHRRIKQQ-----GSGKFSGDIREDLFRFAFESITNVIFGER 350
+ L V QD V RR++ Q G D+ + ++F E I V+ G R
Sbjct: 147 AARYAGTLHDVVQDLV----RRLRSQRGLGAGPPALVRDVAGEFYKFGLEGIAAVLLGSR 202
Query: 351 LGMLEEIVDPEAQKFIDAVYQMFHTSVPMLNLPPDLFRLFRTKTWRDHVAAWDTIFNKAE 530
LG LE V P+ + FI AV +F +++ + +P L RL W WD +F A+
Sbjct: 203 LGCLEPEVPPDTETFIRAVGSVFVSTLLTMAMPSWLHRLV-PGPWARLCRDWDQMFAFAQ 261
Query: 531 KYTQNFYWDLRRKREFNNYPGI-----LYRLLGNDKLLSEDVKANVTEMLAGGVDTTSMT 695
++ + + K + + L L ++L + + NVTE+L GVDT S T
Sbjct: 262 EHVERREAEAAMKSQGKPEEDLGSGAHLTYFLFREELPAPSILGNVTELLLAGVDTVSNT 321
Query: 696 LQWHLYEMARSLNVQEMLREEVLNARRQAQG--DTSKMLQLVPLLKASIKETLRLHPISV 869
L W LYE++R VQ L E+ A + ++ +L +PLLKA +KE LRL+P+
Sbjct: 322 LSWALYELSRHPEVQMALHSEIKTALGPSSSAHPSATVLSQLPLLKAVVKEVLRLYPVVP 381
Query: 870 TLQRYLVNDLVLRDYMIPAKTLVQVAVYAMGRDPAFFSNPGQFDPTRWLGKERDLIHFRN 1049
R D+ + DY+IP TLV + YA RDPA F P F P RWLG+ F +
Sbjct: 382 GNSRVPDKDICVGDYIIPKNTLVTLCHYATSRDPAQFPEPNSFRPARWLGECPAPHPFAS 441
Query: 1050 LGFGWGVRQCVGRRIAELEMTLFLIHILENFKVELQHFS-DVDTIFNLILMPDKPIFLVF 1226
L FG+G R C+GRR+AELE+ + L IL +F+V+ + S + + +L+P++ I L F
Sbjct: 442 LPFGFGKRSCMGRRLAELELQMALAQILIHFEVQPEPGSAPIRPMTRTVLVPERSINLQF 501
>ref|NP_999240.2| 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial [Sus
scrofa].
Length = 514
Score = 201 bits (511), Expect = 8e-52
Identities = 116/403 (28%), Positives = 214/403 (53%), Gaps = 2/403 (0%)
Frame = +3
Query: 24 LFKFEGPNPERYNIPPWVAYHQHYQKPVGVLLKKSGAWKKDRLVLNTEVMAPEAIKNFIP 203
L++ E +P+R I PW AY + ++ G+L+ + W++ R ++M P +
Sbjct: 118 LYRTESAHPQRLEIKPWKAYRDYREEGYGLLILEGEDWQRVRSAFQKKLMKPMEVMKLDN 177
Query: 204 LLDTVSQDFVGVLHRRIKQQGSGKFSGDIREDLFRFAFESITNVIFGERLGMLEEIVDPE 383
++ V DF+ + ++G + D+ +L +++FESI V++ +R G+L++ E
Sbjct: 178 KINEVLADFMSRIDELCDERGCIE---DLYSELNKWSFESICLVLYEKRFGLLQKDAGEE 234
Query: 384 AQKFIDAVYQMFHTSVPMLNLPPDLFRLFRTKTWRDHVAAWDTIFNKAEKYTQNFYWDLR 563
A FI A+ M T M+ P +L + TK W+ H AWDTIF + +
Sbjct: 235 ALNFITAIKTMMSTFGKMMVTPVELHKNLNTKVWQAHTLAWDTIFKSVKSCIDH------ 288
Query: 564 RKREFNNYPG--ILYRLLGNDKLLSEDVKANVTEMLAGGVDTTSMTLQWHLYEMARSLNV 737
R ++ P L + +++L +++ A+VTE+ ++TT+ +L W LY ++R+ +V
Sbjct: 289 RLEKYAEQPSADFLCDIYHHNQLSKKELYASVTELQLAAIETTANSLMWILYNLSRNPHV 348
Query: 738 QEMLREEVLNARRQAQGDTSKMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDYM 917
Q+ L +E+ + + Q ++ L+ +P LKA +KE++RL P R L +VL +Y
Sbjct: 349 QQKLLKEIQSVLPENQMPRAEDLRNMPYLKACLKESMRLTPSVPFTTRTLDKAMVLGEYA 408
Query: 918 IPAKTLVQVAVYAMGRDPAFFSNPGQFDPTRWLGKERDLIHFRNLGFGWGVRQCVGRRIA 1097
+P T++ + Y +G + F + QF P RWL +++ + F +L FG G R C+GRR+A
Sbjct: 409 LPKGTVLMLNTYVLGTNEENFEDSSQFRPERWLQEKKKINPFAHLPFGVGKRMCIGRRLA 468
Query: 1098 ELEMTLFLIHILENFKVELQHFSDVDTIFNLILMPDKPIFLVF 1226
EL++ L L I+ + + V + IL+P++ + + F
Sbjct: 469 ELQLHLALCWIIRKYAIVATDSEPVGMLHLGILVPNRQLPIAF 511
>ref|NP_001230233.1| sterol 26-hydroxylase, mitochondrial precursor [Sus scrofa].
Length = 537
Score = 187 bits (474), Expect = 2e-47
Identities = 122/409 (29%), Positives = 206/409 (50%), Gaps = 12/409 (2%)
Frame = +3
Query: 36 EGPNPERYNIPPWVAYHQHYQKPVGVLLKKSGAWKKDRLVLNTEVMAPEAIKNFIPLLDT 215
EG P R ++ W + G + +W + R LN ++ P + L+
Sbjct: 126 EGKYPVRNDMDLWKEHRDLQGLTYGPFTTEGESWYRLRQALNQRMLKPADAALYTNALNE 185
Query: 216 VSQDFVGVLHRRIKQQGSGKFSGDIREDLFRFAFESITNVIFGERLGMLEEIVDPEAQKF 395
V DF+ L++ + G DI + FA E+I ++F +R+G LE + + + F
Sbjct: 186 VVDDFMVRLNQLRAESTLGDHVPDIAHQFYFFALEAICYILFEKRIGCLERSIPQDTKAF 245
Query: 396 IDAVYQMFHTSVPMLNLPPDLFRLFRTKTWRDHVAAWDTIFNKAEKYTQNFYWDLRRKRE 575
+ +V MF S+ LP L WR ++ W+TIF+ +K ++ + +
Sbjct: 246 VRSVGFMFQNSLYATFLPKWTRPLL--PYWRRYLDGWNTIFSFGKKLIDQKLEEIEAQLQ 303
Query: 576 FNN-----YPGILYRLLGNDKLLSEDVKANVTEMLAGGVDTTSMTLQWHLYEMARSLNVQ 740
G L+ LL + +L + + ++ E+L GVDTTS TL W LY ++++ +Q
Sbjct: 304 AGGPEEPRISGYLHFLLTSGQLSPREAEGSLPELLMAGVDTTSNTLTWALYHLSKNPEIQ 363
Query: 741 EMLREEVLNARRQAQGDTSKMLQLVPLLKASIKETLRLHPISVTLQRYLVN-DLVLRDYM 917
L EEV+ + K L +PLLKA +KETLRL+P+ R + + ++ + ++
Sbjct: 364 AALHEEVVGMVPAGRVPQYKDLAHMPLLKAVLKETLRLYPVVPVNSRVITDKEIEVGGFL 423
Query: 918 IPAKTLVQVAVYAMGRDPAFFSNPGQFDPTRWLGK-ERDLIH----FRNLGFGWGVRQCV 1082
P T + Y + RDP+ F P +F P RWL K + D + F ++ FG+GVR C+
Sbjct: 424 FPKNTQFVLCHYVVSRDPSIFPEPDRFQPQRWLRKNQTDALKGQHPFGSVPFGYGVRGCL 483
Query: 1083 GRRIAELEMTLFLIHILENFKVEL-QHFSDVDTIFNLILMPDKPIFLVF 1226
GRRIAELEM L L +++ ++V L +V ++ ++L+P+K + L F
Sbjct: 484 GRRIAELEMQLLLTRLIQQYEVTLAPETGEVTSVARIVLVPNKKVGLRF 532
>ref|NP_999588.1| cytochrome P450 3A29 [Sus scrofa].
Length = 503
Score = 104 bits (260), Expect = 1e-22
Identities = 96/387 (24%), Positives = 166/387 (42%), Gaps = 15/387 (3%)
Frame = +3
Query: 117 LKKSGAWKKDRLVLNTEVMAPEAIKNFIPLLDTVSQDFVGVLHRRIKQQGSGKFSGDIRE 296
L + WK+ R +L+ + + +K P++ V L + + K +
Sbjct: 120 LAEDEEWKRIRTLLSPTFTSGK-LKEMFPIISHYGDLLVSNLRKEAE-----KGKPVTMK 173
Query: 297 DLF-RFAFESITNVIFGERLGMLEEIVDPEAQKFIDAV-YQMFHTSVPMLNLPPDLFRLF 470
D+F ++ + IT+ FG + L DP + + + F + L P L +F
Sbjct: 174 DIFGAYSMDVITSTAFGVNIDSLNNPQDPFVENSKKLLKFSFFDPFLLSLIFFPFLTPIF 233
Query: 471 RTKTWRDHVAAWDTIFNKAEKYTQNFYWDLRRKREFNNYPGILYRLLGNDK--------- 623
+ F K+ K + ++KR + L +L+ N +
Sbjct: 234 EVLNITLFPKSSVNFFTKSVKRMKESRLTDQQKRRVD-----LLQLMINSQNSKEMDPHK 288
Query: 624 -LLSEDVKANVTEMLAGGVDTTSMTLQWHLYEMARSLNVQEMLREEVLNARRQAQGDTSK 800
L +E++ A + G +TTS L YE+A +VQ+ L+EE+ T
Sbjct: 289 SLSNEELVAQGIIFIFAGYETTSSALSLLAYELATHPDVQQKLQEEIEATFPNKAPPTYD 348
Query: 801 MLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQVAVYAMGRDPAFF 980
L + L + ETLRL+PI+ L+R D+ + +P T+V V V+ + RDP +
Sbjct: 349 ALAQMEYLDMVVNETLRLYPIAARLERACKKDVEIHGVFVPKGTVVVVPVFVLHRDPDLW 408
Query: 981 SNPGQFDPTRWLGKERDLIH-FRNLGFGWGVRQCVGRRIAELEMTLFLIHILENFKVELQ 1157
P +F P R+ K +D I+ + L FG G R C+G R A + M L L+ +L+NF +
Sbjct: 409 PEPEEFRPERFSKKHKDTINPYTYLPFGTGPRNCIGMRFALMNMKLALVRVLQNFSFKPC 468
Query: 1158 HFSDVDTIFNL--ILMPDKPIFLVFRP 1232
+ + + P+KP+ L P
Sbjct: 469 KETQIPLKLTTQGLTQPEKPVVLKILP 495
>ref|NP_999587.1| cytochrome P450 3A39 [Sus scrofa].
Length = 503
Score = 99.8 bits (247), Expect = 3e-21
Identities = 64/208 (30%), Positives = 105/208 (50%), Gaps = 5/208 (2%)
Frame = +3
Query: 624 LLSEDVKANVTEMLAGGVDTTSMTLQWHLYEMARSLNVQEMLREEVLNARRQAQGDTSKM 803
L E++ A + G +TTS +L +YE+A +VQ+ L+EE+ +
Sbjct: 290 LSDEELVAQGVFFIFAGYETTSSSLSLLVYELATHPDVQQKLQEEIDATFPSKALPSYDA 349
Query: 804 LQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQVAVYAMGRDPAFFS 983
L + L + E LRL+PI+ L+R D+ + +P T++ V V+++ RDP +
Sbjct: 350 LAQMEYLDMVVNEILRLYPIAARLERVCKKDVEIHGVSVPKGTVMMVPVFSIHRDPELWP 409
Query: 984 NPGQFDPTRWLGKERDLIH-FRNLGFGWGVRQCVGRRIAELEMTLFLIHILENFKVELQH 1160
P +F P R+ K +D I+ + L FG G R C+G R A + M L L+ +L+NF +
Sbjct: 410 EPEEFRPERFSKKNKDSINPYTYLPFGTGPRNCIGMRFALMNMKLALVRVLQNF--SFKP 467
Query: 1161 FSDVDTIFNL----ILMPDKPIFLVFRP 1232
+ T L ++ P+KPI L P
Sbjct: 468 CKETQTPLKLSSQGLIQPEKPILLKVVP 495
>ref|NP_001128296.1| cytochrome P450 3A46 [Sus scrofa].
Length = 503
Score = 99.8 bits (247), Expect = 3e-21
Identities = 95/399 (23%), Positives = 174/399 (43%), Gaps = 25/399 (6%)
Frame = +3
Query: 111 VLLKKSGAWKKDRLVLNTEVMAPEAIKNFIPLLDTVSQDFVGVLHRRIKQQGSGKFSGDI 290
V L + WK+ R +L+ + + +K P++ V L + + K
Sbjct: 118 VSLAEDEEWKRIRTLLSPTFTSGK-LKEMFPIISHYGDLLVSNLRKEAE-----KGKPVT 171
Query: 291 REDLF-RFAFESITNVIFGERLGMLEEIVDPEAQK-------------FIDAVYQMFHTS 428
+D+F ++ + IT+ FG + L DP + F+ ++ F T
Sbjct: 172 MKDIFGAYSMDVITSTAFGVNVDSLNNPQDPFVENSRKLLKFSFFSPFFLSIIFFPFLTP 231
Query: 429 V-PMLNLPPDLFRLFRTKTWRDHVAAWDTIFNKAEKYTQNFYWDL-------RRKREFNN 584
+ +LN+ LF + + K TQ DL + +E +
Sbjct: 232 ILEVLNIT-----LFPKSVVNFFTRSIKRMKESRLKDTQKHRVDLLQLMINSQNSKEMDA 286
Query: 585 YPGILYRLLGNDKLLSEDVKANVTEMLAGGVDTTSMTLQWHLYEMARSLNVQEMLREEVL 764
+ G L N++L+++ V + G +TTS +L +YE+A +VQ+ L+EE+
Sbjct: 287 HKG-----LSNEELVAQGVI-----FIFAGYETTSSSLSLLVYELATHPDVQQKLQEEID 336
Query: 765 NARRQAQGDTSKMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQV 944
T L + L + E+LR+ P++ L+R D+ + +P T++ V
Sbjct: 337 ATFPNKAPPTYDGLAQMEYLDMVVNESLRIFPVTPRLERSCKKDVEIHGVFVPKGTVMMV 396
Query: 945 AVYAMGRDPAFFSNPGQFDPTRWLGKERDLIH-FRNLGFGWGVRQCVGRRIAELEMTLFL 1121
++A+ R P + P +F P R+ K +D I+ + L FG G R C+G R A + M L L
Sbjct: 397 PIFALHRAPELWPEPEEFRPERFSKKNKDTINPYTYLPFGTGPRNCIGMRFALMNMKLAL 456
Query: 1122 IHILENFKVELQHFSDVDTIFNL--ILMPDKPIFLVFRP 1232
+ +L+NF + + + + ++ P+KPI L+ P
Sbjct: 457 VRVLQNFSFKPCRETQIPLKISSQGLIQPEKPIVLMVVP 495
>ref|NP_001182438.1| cytochrome P450, subfamily IIIA, polypeptide 22 [Sus scrofa].
Length = 503
Score = 98.2 bits (243), Expect = 1e-20
Identities = 95/402 (23%), Positives = 175/402 (43%), Gaps = 25/402 (6%)
Frame = +3
Query: 102 PVGVL-----LKKSGAWKKDRLVLNTEVMAPEAIKNFIPLLDTVSQDFVGVLHRRIKQQG 266
P GV+ + K WK+ R +L+ + + +K P++ + +L R ++++
Sbjct: 110 PAGVMKNAISVAKDEQWKRVRTLLSPTFTSGK-LKEMFPII----AQYGDMLVRNLRKEA 164
Query: 267 SGKFSGDIREDLFRFAFESITNVIFGERLGMLEEIVDPEAQ--------KFIDAVYQMFH 422
S + +E ++ + IT+ FG + L DP Q F+D F
Sbjct: 165 EKGNSINTKEIFGAYSMDVITSTAFGVDVDSLNNPRDPFVQYARKLLRFDFLDP----FI 220
Query: 423 TSVPMLNLPPDLFRLFRTKTWRDHVAAWDTIFNKAEKYTQNFYWDLRRK-------REFN 581
S+ + F + + + T K K ++ +RR N
Sbjct: 221 LSIILFPFLSPFFEVLDITLFPRSSVKFFTQSVKRMKESRLKDQQMRRVDLLQLMINSQN 280
Query: 582 NYPGILYRLLGNDKLLSEDVKANVTEMLAGGVDTTSMTLQWHLYEMARSLNVQEMLREEV 761
+ ++ L + +L+++ + + G +TTS +L + Y +A +VQ+ L+EE+
Sbjct: 281 SKETDAHKALSDQELVAQSII-----FICAGYETTSSSLSFLAYILATHPDVQQNLQEEI 335
Query: 762 LNARRQAQGDTSKMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQ 941
+ L + L + E LRL+PI+ L+R D+ + +P T++
Sbjct: 336 DATFPSKALPSYDALAQMEYLDMVVNEILRLYPIAARLERVCKKDVEIHGVSVPKGTVMM 395
Query: 942 VAVYAMGRDPAFFSNPGQFDPTRWLGKERDLIH-FRNLGFGWGVRQCVGRRIAELEMTLF 1118
V V+++ RDP + P +F P R+ K +D I+ + L FG G R C+G R A + M L
Sbjct: 396 VPVFSIHRDPELWPEPEEFRPERFSKKNKDSINPYTYLPFGTGPRNCIGMRFALMNMKLA 455
Query: 1119 LIHILENFKVELQHFSDVDTIFNL----ILMPDKPIFLVFRP 1232
L+ +L+NF + + T L ++ P+KPI L P
Sbjct: 456 LVRVLQNF--SFKPCKETQTPLKLSSQGLIQPEKPILLKVVP 495
>ref|NP_999211.1| thromboxane-A synthase [Sus scrofa].
Length = 534
Score = 89.4 bits (220), Expect = 5e-18
Identities = 107/401 (26%), Positives = 172/401 (42%), Gaps = 50/401 (12%)
Frame = +3
Query: 99 KPVG--VLLKKSGAWKKDRLVLNTEVMAPEAIKNFIPLLDTVSQDFVGVLHRRIKQQGSG 272
KPV +L + W++ R VL T +P+ + PL+ + L R + SG
Sbjct: 118 KPVADSILFLRDKRWEEVRSVL-TSAFSPKKLNKLTPLISQACDLLLAHLERYAE---SG 173
Query: 273 KFSGDIREDLFRFAFESITNVIFGERLGMLEEIVDPEAQKFIDAVYQMFHTSVPML---- 440
+ DI+ + + + +V FG ++ EE P F+ + F SVP L
Sbjct: 174 D-AFDIQRCYCCYTTDVVASVAFGTQVNSSEEPEHP----FVKHCRRFFAFSVPRLILVL 228
Query: 441 -----NLPPDLFRLFRTKTWRDHVAAWDTIFNK-------------AEKYTQNFYW---D 557
++ L R+ K RD V + FNK AE+ Q+F D
Sbjct: 229 ILSFPSIMVPLARILPNKK-RDEVNGF---FNKLIRNVIALRDQQAAEERRQDFLQMVLD 284
Query: 558 LRR-------------KREFNNYPGI--------LYRLLGNDKLLSEDVKANVTEMLAGG 674
LR ++ F++ G L R L L ++V L G
Sbjct: 285 LRHSAPSVGVENFDIVRQAFSSAKGCPADPSQPHLPRPLSKP-LTVDEVVGQAFLFLIAG 343
Query: 675 VDTTSMTLQWHLYEMARSLNVQEMLREEVLN-ARRQAQGDTSKMLQLVPLLKASIKETLR 851
+ + TL + Y +A + + QE L EV + +++ + + Q +P L + ETLR
Sbjct: 344 YEIITNTLSFVTYLLATNPDCQEKLLREVDDFSKKHPSPEHCSLQQGLPYLDMVLSETLR 403
Query: 852 LHPISVTLQRYLVNDLVLRDYMIPAKTLVQVAVYAMGRDPAFFSNPGQFDPTRWLGKERD 1031
++P + R D + IPA T+++VAV A+ DP + +P FDP R+ + +
Sbjct: 404 MYPPAFRFTREAARDCEVLGQRIPAGTVLEVAVGALHHDPKHWPHPETFDPERFTAEAQR 463
Query: 1032 LIH-FRNLGFGWGVRQCVGRRIAELEMTLFLIHILENFKVE 1151
L F L FG G R C+G ++ LE+ L L+HIL F+ E
Sbjct: 464 LQQPFTYLPFGAGPRSCLGVQLGLLEIKLTLLHILRKFRFE 504
>ref|XP_003354173.1| PREDICTED: cytochrome P450 4F22-like [Sus scrofa].
Length = 531
Score = 85.9 bits (211), Expect = 5e-17
Identities = 101/400 (25%), Positives = 169/400 (42%), Gaps = 25/400 (6%)
Frame = +3
Query: 108 GVLLKKSGAWKKDRLVLNTEVMAPEAIKNFIPLLDTVSQDFVGVLHRRIKQQGSGKF-SG 284
G+LL K W + R +L T + +K ++ + + + ++H + ++ G S
Sbjct: 143 GLLLSKGDKWSRHRRML-TPAFHFDILKPYMKIFNQCTN----IMHAKWRRLAEGSVVSL 197
Query: 285 DIREDLFRFAFESITNVIFGERLGMLEEIVDPEAQKFIDAVYQMFHTSVPM---LNLPPD 455
D+ E + +S+ +F E++ D +I A+ Q+ V L+L D
Sbjct: 198 DMFEHVSLMTLDSLQKCVFSYNSNCQEKMSD-----YISAIIQLSALVVQRQYRLHLHID 252
Query: 456 LFRLFRTKTWRDHVAAWDTIFNKAEKYTQNFYWDLRRK--------REFNNYPGILYRLL 611
F + T R A DT+ + Q LR++ ++ N I LL
Sbjct: 253 -FIYYCTAEGRRFRKACDTVHRFTTEVIQERRRALRQQGAEAWLKAKQGKNLDFIDVLLL 311
Query: 612 GNDK----LLSEDVKANVTEMLAGGVDTTSMTLQWHLYEMARSLNVQEMLRE---EVLNA 770
D+ L ED++A + G DTTS L W L+ +A+ QE RE EV+
Sbjct: 312 ARDEDGKELSDEDIRAEADTFMFEGHDTTSSGLSWVLFNLAKYPEYQEKCREEIQEVMKG 371
Query: 771 RRQAQGDTSKMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRD-YMIPAKTLVQVA 947
R + + + QL P IKE+LR P + R D+ L D +IP + ++
Sbjct: 372 RELEELEWDDLTQL-PFTTMCIKESLRQFPPVTLVTRRCTEDIKLPDGRVIPKGIICLIS 430
Query: 948 VYAMGRDPAFFS-----NPGQFDPTRWLGKERDLIHFRNLGFGWGVRQCVGRRIAELEMT 1112
+Y + +P + NP +FDP +ER + + L F G R C+G+ A EM
Sbjct: 431 IYGIHYNPRVWPDSKVYNPYRFDPDN--PQERSALAY--LPFSAGPRNCIGQNFAMAEMR 486
Query: 1113 LFLIHILENFKVELQHFSDVDTIFNLILMPDKPIFLVFRP 1232
+ + L F++ + V LIL + I+L P
Sbjct: 487 VAVALTLLRFRLSVDRTHKVRRKPELILRTENGIWLKVEP 526
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 39,135,163
Number of extensions: 1156533
Number of successful extensions: 4159
Number of sequences better than 1.0e-05: 57
Number of HSP's gapped: 4092
Number of HSP's successfully gapped: 57
Length of query: 475
Length of database: 11,343,932
Length adjustment: 103
Effective length of query: 372
Effective length of database: 8,779,541
Effective search space: 3265989252
Effective search space used: 3265989252
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-006990
(1427 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|GL893363.2| Sus scrofa unplaced genomic scaffold ChrUScaf1248 581 e-163
gb|GL892482.1| Sus scrofa unplaced genomic scaffold chrU_scaffol... 242 4e-61
>gb|GL893363.2| Sus scrofa unplaced genomic scaffold ChrUScaf1248
Length = 166125
Score = 581 bits (293), Expect = e-163
Identities = 297/299 (99%)
Strand = Plus / Minus
Query: 1128 attctggagaacttcaaggttgaattgcagcacttcagtgatgtggacaccatattcaac 1187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159210 attctggagaacttcaaggttgaattgcagcacttcagtgatgtggacaccatattcaac 159151
Query: 1188 ctcatcctgatgccggacaagcccatcttccttgttttccggcccttcaatcaggatcca 1247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159150 ctcatcctgatgccggacaagcccatcttccttgttttccggcccttcaatcaggatcca 159091
Query: 1248 ctccaggcatgatcggagagggtgggcaacccatttcctaccaaccaggctagcaggggt 1307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159090 ctccaggcatgatcggagagggtgggcaacccatttcctaccaaccaggctagcaggggt 159031
Query: 1308 gtgggaggatggcctgatggggtggggcccatggaagtgtctgtaccaccagtgctcggt 1367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159030 gtgggaggatggcctgatggggtggggcccatggaagtgtctgtaccaccagtgctcggt 158971
Query: 1368 ccctacccctgctcctttctggncagctctgatcagatnaagttggtgctcagtaatca 1426
|||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 158970 ccctacccctgctcctttctggccagctctgatcagataaagttggtgctcagtaatca 158912
Score = 404 bits (204), Expect = e-110
Identities = 204/204 (100%)
Strand = Plus / Minus
Query: 322 ccatcaccaatgtcatatttggagagcgcctggggatgctggaggaaatagtggaccctg 381
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 164808 ccatcaccaatgtcatatttggagagcgcctggggatgctggaggaaatagtggaccctg 164749
Query: 382 aggctcagaagttcattgatgctgtctaccagatgttccacactagtgtccccatgctca 441
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 164748 aggctcagaagttcattgatgctgtctaccagatgttccacactagtgtccccatgctca 164689
Query: 442 atctcccccctgacctgttccgtctgttcaggaccaagacctggagggaccatgtagccg 501
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 164688 atctcccccctgacctgttccgtctgttcaggaccaagacctggagggaccatgtagccg 164629
Query: 502 catgggacactattttcaataaag 525
||||||||||||||||||||||||
Sbjct: 164628 catgggacactattttcaataaag 164605
Score = 396 bits (200), Expect = e-107
Identities = 200/200 (100%)
Strand = Plus / Minus
Query: 928 agacattggtacaagtggccgtctatgccatgggccgagaccccgccttcttctcaaatc 987
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159784 agacattggtacaagtggccgtctatgccatgggccgagaccccgccttcttctcaaatc 159725
Query: 988 caggccagtttgacccaacccggtggttgggtaaagaaagggacctcatccacttccgga 1047
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159724 caggccagtttgacccaacccggtggttgggtaaagaaagggacctcatccacttccgga 159665
Query: 1048 acttgggctttggctggggcgtgcggcagtgtgtgggccggcggatcgctgagctcgaga 1107
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159664 acttgggctttggctggggcgtgcggcagtgtgtgggccggcggatcgctgagctcgaga 159605
Query: 1108 tgactctcttcctcatccat 1127
||||||||||||||||||||
Sbjct: 159604 tgactctcttcctcatccat 159585
Score = 396 bits (200), Expect = e-107
Identities = 200/200 (100%)
Strand = Plus / Minus
Query: 122 gaagtcaggagcctggaagaaagaccggttggtcctgaacacggaggtaatggctccaga 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165950 gaagtcaggagcctggaagaaagaccggttggtcctgaacacggaggtaatggctccaga 165891
Query: 182 ggccataaagaacttcatccccctactggacacagtgtctcaggacttcgtcggcgtcct 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165890 ggccataaagaacttcatccccctactggacacagtgtctcaggacttcgtcggcgtcct 165831
Query: 242 gcacaggcgcatcaagcagcagggttctggaaagttctcaggtgacatcagggaagacct 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165830 gcacaggcgcatcaagcagcagggttctggaaagttctcaggtgacatcagggaagacct 165771
Query: 302 gtttcgcttcgcctttgagt 321
||||||||||||||||||||
Sbjct: 165770 gtttcgcttcgcctttgagt 165751
Score = 333 bits (168), Expect = 2e-88
Identities = 168/168 (100%)
Strand = Plus / Minus
Query: 683 gacatccatgactctgcaatggcacttgtatgagatggcacgtagcctgaatgtgcagga 742
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160913 gacatccatgactctgcaatggcacttgtatgagatggcacgtagcctgaatgtgcagga 160854
Query: 743 gatgctgcgggaggaggtcctcaatgcccggcgccaggcccaaggagacacaagcaagat 802
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160853 gatgctgcgggaggaggtcctcaatgcccggcgccaggcccaaggagacacaagcaagat 160794
Query: 803 gctgcaattggtcccactcctcaaagctagcattaaggagacactgag 850
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160793 gctgcaattggtcccactcctcaaagctagcattaaggagacactgag 160746
Score = 317 bits (160), Expect = 9e-84
Identities = 160/160 (100%)
Strand = Plus / Minus
Query: 524 agctgaaaaatacacccagaacttctactgggacctgagacggaaaagagaatttaacaa 583
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163828 agctgaaaaatacacccagaacttctactgggacctgagacggaaaagagaatttaacaa 163769
Query: 584 ttacccaggcatcctctaccgcctcctgggaaatgacaagctgctctcagaagatgttaa 643
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163768 ttacccaggcatcctctaccgcctcctgggaaatgacaagctgctctcagaagatgttaa 163709
Query: 644 ggccaatgttaccgagatgctggcagggggtgtagacacg 683
||||||||||||||||||||||||||||||||||||||||
Sbjct: 163708 ggccaatgttaccgagatgctggcagggggtgtagacacg 163669
Score = 161 bits (81), Expect = 1e-36
Identities = 81/81 (100%)
Strand = Plus / Minus
Query: 849 agactccaccccatctccgtgaccctgcagagatacctcgtgaatgacttggttcttcga 908
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160394 agactccaccccatctccgtgaccctgcagagatacctcgtgaatgacttggttcttcga 160335
Query: 909 gattacatgattcctgccaag 929
|||||||||||||||||||||
Sbjct: 160334 gattacatgattcctgccaag 160314
>gb|GL892482.1| Sus scrofa unplaced genomic scaffold chrU_scaffold1342
Length = 117911
Score = 242 bits (122), Expect = 4e-61
Identities = 122/122 (100%)
Strand = Plus / Plus
Query: 1 tcgaccctgaagatgtggcccttctctttaagttcgaaggacccaacccagaacgataca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116272 tcgaccctgaagatgtggcccttctctttaagttcgaaggacccaacccagaacgataca 116331
Query: 61 acatcccgccctgggttgcctatcaccagcattaccagaagcctgttggggtcctgctga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116332 acatcccgccctgggttgcctatcaccagcattaccagaagcctgttggggtcctgctga 116391
Query: 121 ag 122
||
Sbjct: 116392 ag 116393
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 38,495,455
Number of extensions: 234
Number of successful extensions: 234
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 234
Number of HSP's successfully gapped: 8
Length of query: 1427
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1406
Effective length of database: 2,808,413,156
Effective search space: 3948628897336
Effective search space used: 3948628897336
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)