Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-006991
(1586 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_788817.1| cholesterol side-chain cleavage enzyme, mitocho... 852 0.0
Alignment gi|NP_777063.2| cytochrome P450 11B1, mitochondrial precursor [... 334 1e-91
Alignment gi|NP_001179213.1| 25-hydroxyvitamin D-1 alpha hydroxylase, mit... 240 2e-63
Alignment gi|XP_002687602.1| PREDICTED: cytochrome P450, family 27, subfa... 240 2e-63
Alignment gi|XP_002692552.1| PREDICTED: cytochrome P450, family 24, subfa... 225 7e-59
Alignment gi|XP_591370.3| PREDICTED: cytochrome P450, family 24, subfamil... 224 1e-58
Alignment gi|XP_002685263.1| PREDICTED: FLJ16008 protein-like [Bos taurus]. 217 2e-56
Alignment gi|XP_874669.3| PREDICTED: FLJ16008 protein-like [Bos taurus]. 217 2e-56
Alignment gi|NP_001076882.1| sterol 26-hydroxylase, mitochondrial [Bos ta... 202 7e-52
Alignment gi|XP_002692553.1| PREDICTED: cytochrome P450, family 24, subfa... 180 3e-45
>ref|NP_788817.1| cholesterol side-chain cleavage enzyme, mitochondrial precursor [Bos
taurus].
Length = 520
Score = 852 bits (2201), Expect(2) = 0.0
Identities = 411/497 (82%), Positives = 455/497 (91%)
Frame = +1
Query: 58 MLARGLALRSVLVKGCQPFLSAPRECPGHPRVGTGEGACISTKTPRPFSEIPSPGDNGWI 237
MLARGL LRS LVK C P LS E GH RVGTGEGA ISTKTPRP+SEIPSPGDNGW+
Sbjct: 1 MLARGLPLRSALVKACPPILSTVGEGWGHHRVGTGEGAGISTKTPRPYSEIPSPGDNGWL 60
Query: 238 NLYRFWKEKGTQKIHYHHVQNFQKYGPIYREKLGNLGSVYIIDPEDVALLFKFEGPNPER 417
NLY FW+EKG+Q+IH+ H++NFQKYGPIYREKLGNL SVYII PEDVA LFKFEG PER
Sbjct: 61 NLYHFWREKGSQRIHFRHIENFQKYGPIYREKLGNLESVYIIHPEDVAHLFKFEGSYPER 120
Query: 418 YNIPPWVAYHQHYQKPVGVLLKKSGAWKKDRLVLNTEVMAPEAIKNFIPLLDTVSQDFVG 597
Y+IPPW+AYH++YQKP+GVL KKSG WKKDR+VLNTEVMAPEAIKNFIPLL+ VSQDFV
Sbjct: 121 YDIPPWLAYHRYYQKPIGVLFKKSGTWKKDRVVLNTEVMAPEAIKNFIPLLNPVSQDFVS 180
Query: 598 VLHRRIKQQGSGKFSGDIREDLFRFAFESITNVIFGERLGMLEEIVDPEAQKFIDAVYQM 777
+LH+RIKQQGSGKF GDI+EDLF FAFESITNV+FGERLGMLEE V+PEAQKFIDAVY+M
Sbjct: 181 LLHKRIKQQGSGKFVGDIKEDLFHFAFESITNVMFGERLGMLEETVNPEAQKFIDAVYKM 240
Query: 778 FHTSVPMLNLPPDLFRLFRTKTWRDHVAAWDTIFNKAEKYTQNFYWDLRRKREFNNYPGI 957
FHTSVP+LN+PP+L+RLFRTKTWRDHVAAWDTIFNKAEKYT+ FY DLRRK EF NYPGI
Sbjct: 241 FHTSVPLLNVPPELYRLFRTKTWRDHVAAWDTIFNKAEKYTEIFYQDLRRKTEFRNYPGI 300
Query: 958 LYRLLGNDKLLSEDVKANVTEMLAGGVDTTSMTLQWHLYEMARSLNVQEMLREEVLNARR 1137
LY LL ++K+L EDVKAN+TEMLAGGV+TTSMTLQWHLYEMARSLNVQEMLREEVLNARR
Sbjct: 301 LYCLLKSEKMLLEDVKANITEMLAGGVNTTSMTLQWHLYEMARSLNVQEMLREEVLNARR 360
Query: 1138 QAQGDTSKMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQVAVYA 1317
QA+GD SKMLQ+VPLLKASIKETLRLHPISVTLQRY +DLVL+DY+IPAKTLVQVA+YA
Sbjct: 361 QAEGDISKMLQMVPLLKASIKETLRLHPISVTLQRYPESDLVLQDYLIPAKTLVQVAIYA 420
Query: 1318 MGRDPAFFSNPGQFDPTRWLGKERDLIHFRNLGFGWGVRQCVGRRIAELEMTLFLIHILE 1497
MGRDPAFFS+P +FDPTRWL K++DLIHFRNLGFGWGVRQCVGRRIAELEMTLFLIHILE
Sbjct: 421 MGRDPAFFSSPDKFDPTRWLSKDKDLIHFRNLGFGWGVRQCVGRRIAELEMTLFLIHILE 480
Query: 1498 DFQGELQHFXDVDTISN 1548
+F+ E+QH DVDTI N
Sbjct: 481 NFKVEMQHIGDVDTIFN 497
Score = 26.6 bits (57), Expect(2) = 0.0
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = +3
Query: 1548 LILMPDRPIFLVF 1586
LIL PD+PIFLVF
Sbjct: 498 LILTPDKPIFLVF 510
>ref|NP_777063.2| cytochrome P450 11B1, mitochondrial precursor [Bos taurus].
Length = 503
Score = 334 bits (857), Expect = 1e-91
Identities = 173/461 (37%), Positives = 274/461 (59%)
Frame = +1
Query: 160 GEGACISTKTPRPFSEIPSPGDNGWINLYRFWKEKGTQKIHYHHVQNFQKYGPIYREKLG 339
G + K PF +P N W+ + + WKE+ ++ +H Q FQ+ GPI+R +G
Sbjct: 25 GTRGAAAPKAVLPFEAMPRCPGNKWMRMLQIWKEQSSENMHLDMHQTFQELGPIFRYDVG 84
Query: 340 NLGSVYIIDPEDVALLFKFEGPNPERYNIPPWVAYHQHYQKPVGVLLKKSGAWKKDRLVL 519
V+++ PEDV L + + +P+R + PW+AY Q GV L W+ DRL L
Sbjct: 85 GRHMVFVMLPEDVERLQQADSHHPQRMILEPWLAYRQARGHKCGVFLLNGPQWRLDRLRL 144
Query: 520 NTEVMAPEAIKNFIPLLDTVSQDFVGVLHRRIKQQGSGKFSGDIREDLFRFAFESITNVI 699
N +V++ A++ + PL+D V++DF L R+ Q G + R LFR+ E+ T V+
Sbjct: 145 NPDVLSLPALQKYTPLVDGVARDFSQTLKARVLQNARGSLTLGHRAQLFRYTIEASTLVL 204
Query: 700 FGERLGMLEEIVDPEAQKFIDAVYQMFHTSVPMLNLPPDLFRLFRTKTWRDHVAAWDTIF 879
+GERLG+L + +P++ FI A+ M ++V ++ +P L R T WR+H AWD IF
Sbjct: 205 YGERLGLLTQQPNPDSLNFIHALEAMLKSTVQLMFVPRRLSRWMSTNMWREHFEAWDYIF 264
Query: 880 NKAEKYTQNFYWDLRRKREFNNYPGILYRLLGNDKLLSEDVKANVTEMLAGGVDTTSMTL 1059
A + Q Y +L + +Y GI+ LL + + +KAN ++ AG VDTT+ L
Sbjct: 265 QYANRAIQRIYQELALGHPW-HYSGIVAELLMRADMTLDTIKANTIDLTAGSVDTTAFPL 323
Query: 1060 QWHLYEMARSLNVQEMLREEVLNARRQAQGDTSKMLQLVPLLKASIKETLRLHPISVTLQ 1239
L+E+AR+ VQ+ +R+E L A + + + + +PLL+A++KETLRL+P+ +TL+
Sbjct: 324 LMTLFELARNPEVQQAVRQESLVAEARISENPQRAITELPLLRAALKETLRLYPVGITLE 383
Query: 1240 RYLVNDLVLRDYMIPAKTLVQVAVYAMGRDPAFFSNPGQFDPTRWLGKERDLIHFRNLGF 1419
R + +DLVL++Y IPA TLV+V +Y++GR+PA F+ P + P RWL ++ F +L F
Sbjct: 384 REVSSDLVLQNYHIPAGTLVKVLLYSLGRNPAVFARPESYHPQRWLDRQGSGSRFPHLAF 443
Query: 1420 GWGVRQCVGRRIAELEMTLFLIHILEDFQGELQHFXDVDTI 1542
G+GVRQC+GRR+AE+EM L L H+L++F E D+ +
Sbjct: 444 GFGVRQCLGRRVAEVEMLLLLHHVLKNFLVETLEQEDIKMV 484
>ref|NP_001179213.1| 25-hydroxyvitamin D-1 alpha hydroxylase, mitochondrial [Bos taurus].
Length = 508
Score = 240 bits (613), Expect = 2e-63
Identities = 159/466 (34%), Positives = 240/466 (51%), Gaps = 12/466 (2%)
Frame = +1
Query: 145 PRVGTGEGACISTKTPRPFSEIPSPGDNGWINLYRFWKEKGTQKIHYHHVQNFQKYGPIY 324
P +G G+ S PR ++IP P G+ L + + G ++H VQ ++GP++
Sbjct: 18 PELGASLGSRGSESAPRVLADIPGPSTPGF--LAELFCKGGLSRLHELQVQGAARFGPVW 75
Query: 325 REKLGNLGSVYIIDPEDVALLFKFEGPNPERYNIPPWVAYHQHYQKPVGVLLKKSGAWKK 504
G + +VY+ P V L + EGP PER + PW + + Q+ G+L + W++
Sbjct: 76 LASFGTVRTVYLAAPTLVEQLLRQEGPRPERCSFSPWTEHRRRRQRACGLLTAEGEEWQR 135
Query: 505 DRLVLNTEVMAPEAIKNFIPLLDTVSQDFVGVLHRRIKQQGSGKFS--GDIREDLFRFAF 678
R +L ++ P+A + L V +D V L RR + G+G S D+ + ++F
Sbjct: 136 LRSLLAPLLLRPQAAARYAGTLHGVVRDLVRRL-RRQRGLGAGPPSLVRDVAGEFYKFGL 194
Query: 679 ESITNVIFGERLGMLEEIVDPEAQKFIDAVYQMFHTSVPMLNLPPDLFRLFRTKTWRDHV 858
E I V+ G RLG LE V P+ + FI AV +F +++ + +P L R+ W
Sbjct: 195 EGIAAVLLGSRLGCLEAEVPPDTETFIRAVGSVFVSTLLTMAMPSWLHRVV-PGPWDRLC 253
Query: 859 AAWDTIFNKAEKYTQNFYWDLR-----RKREFNNYPG--ILYRLLGNDKLLSEDVKANVT 1017
WD +F A+++ + ++ K E + PG + Y LL + L + + NVT
Sbjct: 254 RDWDQMFAFAQQHVEQREAEVAMRNQSEKSEEDMGPGAHLTYFLLQKE-LPAASILGNVT 312
Query: 1018 EMLAGGVDTTSMTLQWHLYEMARSLNVQEMLREEV---LNARRQAQGDTSKMLQLVPLLK 1188
E+L GVDT S TL W LYE++R +Q L E+ L Q + + QL PLLK
Sbjct: 313 ELLLAGVDTVSNTLSWALYELSRHPEIQTALHAEITAALGPGSSTQPSATALSQL-PLLK 371
Query: 1189 ASIKETLRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQVAVYAMGRDPAFFSNPGQFDPT 1368
A +KE LRL+P+ R D+ + +Y+IP TLV + YA RDPA F P F P
Sbjct: 372 AVVKEVLRLYPVVPGNSRVPDRDICVGEYIIPKNTLVTLCHYATSRDPAQFPEPNSFRPA 431
Query: 1369 RWLGKERDLIHFRNLGFGWGVRQCVGRRIAELEMTLFLIHILEDFQ 1506
RWLG+ F +L FG+G R CVGRR+AELE+ + L IL F+
Sbjct: 432 RWLGEGPAPHPFASLPFGFGKRSCVGRRLAELELQMALAQILIHFE 477
>ref|XP_002687602.1| PREDICTED: cytochrome P450, family 27, subfamily B, polypeptide 1
[Bos taurus].
Length = 508
Score = 240 bits (613), Expect = 2e-63
Identities = 159/466 (34%), Positives = 240/466 (51%), Gaps = 12/466 (2%)
Frame = +1
Query: 145 PRVGTGEGACISTKTPRPFSEIPSPGDNGWINLYRFWKEKGTQKIHYHHVQNFQKYGPIY 324
P +G G+ S PR ++IP P G+ L + + G ++H VQ ++GP++
Sbjct: 18 PELGASLGSRGSESAPRVLADIPGPSTPGF--LAELFCKGGLSRLHELQVQGAARFGPVW 75
Query: 325 REKLGNLGSVYIIDPEDVALLFKFEGPNPERYNIPPWVAYHQHYQKPVGVLLKKSGAWKK 504
G + +VY+ P V L + EGP PER + PW + + Q+ G+L + W++
Sbjct: 76 LASFGTVRTVYLAAPTLVEQLLRQEGPRPERCSFSPWTEHRRRRQRACGLLTAEGEEWQR 135
Query: 505 DRLVLNTEVMAPEAIKNFIPLLDTVSQDFVGVLHRRIKQQGSGKFS--GDIREDLFRFAF 678
R +L ++ P+A + L V +D V L RR + G+G S D+ + ++F
Sbjct: 136 LRSLLAPLLLRPQAAARYAGTLHGVVRDLVRRL-RRQRGLGAGPPSLVRDVAGEFYKFGL 194
Query: 679 ESITNVIFGERLGMLEEIVDPEAQKFIDAVYQMFHTSVPMLNLPPDLFRLFRTKTWRDHV 858
E I V+ G RLG LE V P+ + FI AV +F +++ + +P L R+ W
Sbjct: 195 EGIAAVLLGSRLGCLEAEVPPDTETFIRAVGSVFVSTLLTMAMPSWLHRVV-PGPWDRLC 253
Query: 859 AAWDTIFNKAEKYTQNFYWDLR-----RKREFNNYPG--ILYRLLGNDKLLSEDVKANVT 1017
WD +F A+++ + ++ K E + PG + Y LL + L + + NVT
Sbjct: 254 RDWDQMFAFAQQHVEQREAEVAMRNQSEKSEEDMGPGAHLTYFLLQKE-LPAASILGNVT 312
Query: 1018 EMLAGGVDTTSMTLQWHLYEMARSLNVQEMLREEV---LNARRQAQGDTSKMLQLVPLLK 1188
E+L GVDT S TL W LYE++R +Q L E+ L Q + + QL PLLK
Sbjct: 313 ELLLAGVDTVSNTLSWALYELSRHPEIQTALHAEITAALGPGSSTQPSATALSQL-PLLK 371
Query: 1189 ASIKETLRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQVAVYAMGRDPAFFSNPGQFDPT 1368
A +KE LRL+P+ R D+ + +Y+IP TLV + YA RDPA F P F P
Sbjct: 372 AVVKEVLRLYPVVPGNSRVPDRDICVGEYIIPKNTLVTLCHYATSRDPAQFPEPNSFRPA 431
Query: 1369 RWLGKERDLIHFRNLGFGWGVRQCVGRRIAELEMTLFLIHILEDFQ 1506
RWLG+ F +L FG+G R CVGRR+AELE+ + L IL F+
Sbjct: 432 RWLGEGPAPHPFASLPFGFGKRSCVGRRLAELELQMALAQILIHFE 477
>ref|XP_002692552.1| PREDICTED: cytochrome P450, family 24, subfamily A, polypeptide
1-like isoform 1 [Bos taurus].
Length = 514
Score = 225 bits (574), Expect = 7e-59
Identities = 150/493 (30%), Positives = 248/493 (50%), Gaps = 6/493 (1%)
Frame = +1
Query: 82 RSVLVKGCQPFLSAPRECPGHPRVGTGEGACISTKTPRPFSEIPSPGDNGWINLYRF--- 252
R V C P PRE P P + GE +T PG W L
Sbjct: 26 RPVTSTACSP--RRPREVPLCPVMEPGEAQDAATL----------PGPTKWPLLGSLLEI 73
Query: 253 -WKEKGTQKIHYHHVQNFQKYGPIYREKLGNLGSVYIIDPEDVALLFKFEGPNPERYNIP 429
WK G +K H V+ +KYG I+R KLG+ SV++ P + L++ E +P+R I
Sbjct: 74 LWKG-GLKKQHDTLVEYHKKYGKIFRMKLGSFDSVHLGSPCLLEALYRTESAHPQRLEIK 132
Query: 430 PWVAYHQHYQKPVGVLLKKSGAWKKDRLVLNTEVMAPEAIKNFIPLLDTVSQDFVGVLHR 609
PW AY + ++ G+L+ + W++ R ++M P I ++ V DF+G +
Sbjct: 133 PWKAYRDYREEGYGLLILEGEDWQRVRSAFQKKLMKPVEIMKLDDKINEVLADFMGRIDE 192
Query: 610 RIKQQGSGKFSGDIREDLFRFAFESITNVIFGERLGMLEEIVDPEAQKFIDAVYQMFHTS 789
++G + D+ +L +++FESI V++ +R G+L++ EA FI AV M
Sbjct: 193 LCDERGRIE---DLYTELNKWSFESICLVLYEKRFGLLQKNAGEEALNFIMAVKTMMSMF 249
Query: 790 VPMLNLPPDLFRLFRTKTWRDHVAAWDTIFNKAEKYTQNFYWDLRRKREFNNYPGI--LY 963
M+ P +L R T+ W+ H AWDTIF + N R +++ P + L
Sbjct: 250 GKMMVTPVELHRSLNTRVWQAHTQAWDTIFRSVKSCVDN------RLEKYSEQPSMDFLC 303
Query: 964 RLLGNDKLLSEDVKANVTEMLAGGVDTTSMTLQWHLYEMARSLNVQEMLREEVLNARRQA 1143
+ +++L +++ A VTE+ V+TT+ +L W LY ++R+ +VQ+ L +E+ + +
Sbjct: 304 DIYHHNQLSKKELYAAVTELQLAAVETTANSLMWILYNLSRNPHVQQKLFKEIQSVLPEN 363
Query: 1144 QGDTSKMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQVAVYAMG 1323
Q ++ L+ +P LKA +KE++RL+P R L +VL +Y +P T++ + + +G
Sbjct: 364 QLPRAEDLRNMPYLKACLKESMRLNPTVPFTTRTLDKAMVLGEYALPKGTVLVLNTHVLG 423
Query: 1324 RDPAFFSNPGQFDPTRWLGKERDLIHFRNLGFGWGVRQCVGRRIAELEMTLFLIHILEDF 1503
F QF P RWL ++ + F +L FG G R CVGRR+AEL++ L L I+ +
Sbjct: 424 SSEENFEESSQFRPERWLQDKKKISPFAHLPFGVGKRMCVGRRLAELQLHLALCWIVRKY 483
Query: 1504 QGELQHFXDVDTI 1542
V+T+
Sbjct: 484 DVVATDLEPVETL 496
>ref|XP_591370.3| PREDICTED: cytochrome P450, family 24, subfamily A, polypeptide
1-like isoform 2 [Bos taurus].
Length = 514
Score = 224 bits (572), Expect = 1e-58
Identities = 150/493 (30%), Positives = 248/493 (50%), Gaps = 6/493 (1%)
Frame = +1
Query: 82 RSVLVKGCQPFLSAPRECPGHPRVGTGEGACISTKTPRPFSEIPSPGDNGWINLYRF--- 252
R V C P PRE P P + GE +T PG W L
Sbjct: 26 RPVTSTACSP--RRPREVPLCPVMEPGEAQDAATL----------PGPTKWPLLGSLLEI 73
Query: 253 -WKEKGTQKIHYHHVQNFQKYGPIYREKLGNLGSVYIIDPEDVALLFKFEGPNPERYNIP 429
WK G +K H V+ +KYG I+R KLG+ SV++ P + L++ E +P+R I
Sbjct: 74 LWKG-GLKKQHDTLVEYHKKYGKIFRMKLGSFDSVHLGSPCLLEALYRTESAHPQRLEIK 132
Query: 430 PWVAYHQHYQKPVGVLLKKSGAWKKDRLVLNTEVMAPEAIKNFIPLLDTVSQDFVGVLHR 609
PW AY + ++ G+L+ + W++ R ++M P I ++ V DF+G +
Sbjct: 133 PWKAYRDYREEGYGLLILEGEDWQRVRSAFPKKLMKPVEIMKLDDKINEVLADFMGRIDE 192
Query: 610 RIKQQGSGKFSGDIREDLFRFAFESITNVIFGERLGMLEEIVDPEAQKFIDAVYQMFHTS 789
++G + D+ +L +++FESI V++ +R G+L++ EA FI AV M
Sbjct: 193 LCDERGRIE---DLYTELNKWSFESICLVLYEKRFGLLQKNAGEEALNFIMAVKTMMSMF 249
Query: 790 VPMLNLPPDLFRLFRTKTWRDHVAAWDTIFNKAEKYTQNFYWDLRRKREFNNYPGI--LY 963
M+ P +L R T+ W+ H AWDTIF + N R +++ P + L
Sbjct: 250 GKMMVTPVELHRSLNTRVWQAHTQAWDTIFRSVKSCVDN------RLEKYSEQPSMDFLC 303
Query: 964 RLLGNDKLLSEDVKANVTEMLAGGVDTTSMTLQWHLYEMARSLNVQEMLREEVLNARRQA 1143
+ +++L +++ A VTE+ V+TT+ +L W LY ++R+ +VQ+ L +E+ + +
Sbjct: 304 DIYHHNQLSKKELYAAVTELQLAAVETTANSLMWILYNLSRNPHVQQKLFKEIQSVLPEN 363
Query: 1144 QGDTSKMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQVAVYAMG 1323
Q ++ L+ +P LKA +KE++RL+P R L +VL +Y +P T++ + + +G
Sbjct: 364 QLPRAEDLRNMPYLKACLKESMRLNPTVPFTTRTLDKAMVLGEYALPKGTVLVLNTHVLG 423
Query: 1324 RDPAFFSNPGQFDPTRWLGKERDLIHFRNLGFGWGVRQCVGRRIAELEMTLFLIHILEDF 1503
F QF P RWL ++ + F +L FG G R CVGRR+AEL++ L L I+ +
Sbjct: 424 SSEENFEESSQFRPERWLQDKKKISPFAHLPFGVGKRMCVGRRLAELQLHLALCWIVRKY 483
Query: 1504 QGELQHFXDVDTI 1542
V+T+
Sbjct: 484 DVVATDLEPVETL 496
>ref|XP_002685263.1| PREDICTED: FLJ16008 protein-like [Bos taurus].
Length = 537
Score = 217 bits (553), Expect = 2e-56
Identities = 135/443 (30%), Positives = 223/443 (50%), Gaps = 6/443 (1%)
Frame = +1
Query: 196 PFSEIPSPGDNGWINLYRFWKEKGTQKIHYHHVQNFQKYGPIYREKLGNLGSVYIIDPED 375
P S PG NL F+ + G +IH ++ ++YG I++ G V + D +
Sbjct: 63 PRSLAAMPGPRTLANLVEFFGKDGFSRIHEIQQKHTREYGKIFKSHFGPQFVVSVADRDL 122
Query: 376 VALLFKFEGPNPERYNIPPWVAYHQHYQKPVGVLLKKSGAWKKDRLVLNTEVMAPEAIKN 555
VA + + EG +P+R N+ W Y + G++ + W K R VL ++ P+ +
Sbjct: 123 VAQVLRAEGASPQRANMGSWQEYRDLRGRSTGLISAEGEQWLKMRSVLRQRILKPKDVAI 182
Query: 556 FIPLLDTVSQDFVGVLHRRIKQQGSGKFSGDIREDLFRFAFESITNVIFGERLGMLEEIV 735
F ++ V D + ++ Q G +I + F+++ E + +++ RLG L +
Sbjct: 183 FAGEINQVIADLIKRIYFLKSQAEDGDTVTNINDLFFKYSMEGVATILYESRLGCLGNSI 242
Query: 736 DPEAQKFIDAVYQMFHTSVPML--NLPPDLFRLFRTKTWRDHVAAWDTIFNKAEKYTQNF 909
+I+A+ MF T + P RL K W++ +WD +F ++ + N
Sbjct: 243 PQLTADYIEALALMFCTFKTSMYAGAIPRWLRLLIPKPWQEFCRSWDGLFEFSQIHVDNK 302
Query: 910 YWDLRRKREFNNYP--GILYRLLGNDKLLSEDVKANVTEMLAGGVDTTSMTLQWHLYEMA 1083
D+R + E G+L L + +L E++ AN+TEML GVDTTS TL W +Y +A
Sbjct: 303 LRDIRCQMERGERVRGGLLTYLFLSQELTLEEIYANMTEMLLAGVDTTSFTLSWAVYLLA 362
Query: 1084 RSLNVQEMLREEVLNARRQAQGDTSKMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLV 1263
R VQ+ L E++ + T+ + VPL++A +KETLRL P+ R DL+
Sbjct: 363 RHPEVQQALYREIVRNLGERHVPTAADVPKVPLVRALLKETLRLFPVLPGNGRVTQEDLI 422
Query: 1264 LRDYMIPAKTLVQVAVYAMGRDPAFFSNPGQFDPTRWL--GKERDLIHFRNLGFGWGVRQ 1437
+ Y+IP T + + YA + F +F P RWL G R + +F ++ FG+G R
Sbjct: 423 VGGYLIPRGTQLALCHYATSYEDENFPRAKEFRPERWLRQGNLRRVDNFGSIPFGYGARS 482
Query: 1438 CVGRRIAELEMTLFLIHILEDFQ 1506
C+GRRIAELE+ L +I +L+ F+
Sbjct: 483 CIGRRIAELEIHLLVIQLLQHFE 505
>ref|XP_874669.3| PREDICTED: FLJ16008 protein-like [Bos taurus].
Length = 537
Score = 217 bits (553), Expect = 2e-56
Identities = 135/443 (30%), Positives = 223/443 (50%), Gaps = 6/443 (1%)
Frame = +1
Query: 196 PFSEIPSPGDNGWINLYRFWKEKGTQKIHYHHVQNFQKYGPIYREKLGNLGSVYIIDPED 375
P S PG NL F+ + G +IH ++ ++YG I++ G V + D +
Sbjct: 63 PRSLAAMPGPRTLANLVEFFGKDGFSRIHEIQQKHTREYGKIFKSHFGPQFVVSVADRDL 122
Query: 376 VALLFKFEGPNPERYNIPPWVAYHQHYQKPVGVLLKKSGAWKKDRLVLNTEVMAPEAIKN 555
VA + + EG +P+R N+ W Y + G++ + W K R VL ++ P+ +
Sbjct: 123 VAQVLRAEGASPQRANMGSWQEYRDLRGRSTGLISAEGEQWLKMRSVLRQRILKPKDVAI 182
Query: 556 FIPLLDTVSQDFVGVLHRRIKQQGSGKFSGDIREDLFRFAFESITNVIFGERLGMLEEIV 735
F ++ V D + ++ Q G +I + F+++ E + +++ RLG L +
Sbjct: 183 FAGEINQVIADLIKRIYFLKSQAEDGDTVTNINDLFFKYSMEGVATILYESRLGCLGNSI 242
Query: 736 DPEAQKFIDAVYQMFHTSVPML--NLPPDLFRLFRTKTWRDHVAAWDTIFNKAEKYTQNF 909
+I+A+ MF T + P RL K W++ +WD +F ++ + N
Sbjct: 243 PQLTADYIEALALMFCTFKTSMYAGAIPRWLRLLIPKPWQEFCRSWDGLFEFSQIHVDNK 302
Query: 910 YWDLRRKREFNNYP--GILYRLLGNDKLLSEDVKANVTEMLAGGVDTTSMTLQWHLYEMA 1083
D+R + E G+L L + +L E++ AN+TEML GVDTTS TL W +Y +A
Sbjct: 303 LRDIRCQMERGERVRGGLLTYLFLSQELTLEEIYANMTEMLLAGVDTTSFTLSWAVYLLA 362
Query: 1084 RSLNVQEMLREEVLNARRQAQGDTSKMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLV 1263
R VQ+ L E++ + T+ + VPL++A +KETLRL P+ R DL+
Sbjct: 363 RHPEVQQALYREIVRNLGERHVPTAADVPKVPLVRALLKETLRLFPVLPGNGRVTQEDLI 422
Query: 1264 LRDYMIPAKTLVQVAVYAMGRDPAFFSNPGQFDPTRWL--GKERDLIHFRNLGFGWGVRQ 1437
+ Y+IP T + + YA + F +F P RWL G R + +F ++ FG+G R
Sbjct: 423 VGGYLIPRGTQLALCHYATSYEDENFPRAKEFRPERWLRQGNLRRVDNFGSIPFGYGARS 482
Query: 1438 CVGRRIAELEMTLFLIHILEDFQ 1506
C+GRRIAELE+ L +I +L+ F+
Sbjct: 483 CIGRRIAELEIHLLVIQLLQHFE 505
>ref|NP_001076882.1| sterol 26-hydroxylase, mitochondrial [Bos taurus].
Length = 534
Score = 202 bits (514), Expect = 7e-52
Identities = 142/497 (28%), Positives = 235/497 (47%), Gaps = 14/497 (2%)
Frame = +1
Query: 58 MLARGLALRSVLVKGCQPFLSAPRECPGHPRV---GTGEGACISTKTPRPFSEIPSPGDN 228
+L R AL + G + + P P GTG G + R E+ PG
Sbjct: 13 LLGRRAALPGLGSFGARAKAAIPSALPAAQAAEAPGTGPG----DRRLRSLDELSGPGQL 68
Query: 229 GWINLYRFWKEKGTQKIHYHHVQNFQKYGPIYREKLGNLGSVYIIDPEDVALLFKFEGPN 408
L++ + +H V N KYGPI+ ++G V++ + + + EG
Sbjct: 69 RL--LFQLLVQGYVLHLHQLQVLNKAKYGPIWINRVGPQMHVHLASAPLLEQVMRQEGKY 126
Query: 409 PERYNIPPWVAYHQHYQKPVGVLLKKSGAWKKDRLVLNTEVMAPEAIKNFIPLLDTVSQD 588
P R ++ W + G W + R LN ++ P + L+ V D
Sbjct: 127 PVRDDMKLWKEHRDQQGLSYGPFTTMGEQWYRLRQTLNQRMLKPAEAALYTDALNEVIND 186
Query: 589 FVGVLHRRIKQQGSGKFSGDIREDLFRFAFESITNVIFGERLGMLEEIVDPEAQKFIDAV 768
F+ L + + SG DI + FA E+I+ ++F +R+G LE + + + F+ +V
Sbjct: 187 FMDQLKQLRAESASGDHVPDIAHQFYFFALEAISYILFEKRIGCLERSIPKDTETFVRSV 246
Query: 769 YQMFHTSVPMLNLPPDLFRLFRTKTWRDHVAAWDTIFNKAEKYTQNFYWDLRRKREFNN- 945
MFH S+ + LP L W+ ++ W+TIF+ +K ++ + + N
Sbjct: 247 GLMFHNSLFVTFLPTWTRPLL--PFWKRYLDGWNTIFSFGKKLIDQKLEEIEAQLKTENP 304
Query: 946 ----YPGILYRLLGNDKLLSEDVKANVTEMLAGGVDTTSMTLQWHLYEMARSLNVQEMLR 1113
G L+ LL + +L + + ++ E+L GVDTTS TL W LY ++++ +Q L
Sbjct: 305 EKTQISGYLHFLLTSGQLSPREAEGSLPELLLAGVDTTSNTLTWALYHLSKNPEIQAALH 364
Query: 1114 EEVLNARRQAQGDTSKMLQLVPLLKASIKETLRLHPISVTLQRYLVN-DLVLRDYMIPAK 1290
+EV+ Q K L +PLLKA +KETLRL+P+ R +V+ ++ + ++ P
Sbjct: 365 KEVVGVVPAGQVPQHKDLARMPLLKAVLKETLRLYPVVPVNSRVVVDKEIEVGGFLFPKN 424
Query: 1291 TLVQVAVYAMGRDPAFFSNPGQFDPTRWLGKER-DLIH----FRNLGFGWGVRQCVGRRI 1455
T + Y + RDP + P F P RWL K + D + F ++ FG+GVR C+GRRI
Sbjct: 425 TQFVLCHYVISRDPDIYPEPDSFQPQRWLRKNQPDALKTQHPFGSVPFGYGVRACLGRRI 484
Query: 1456 AELEMTLFLIHILEDFQ 1506
AELEM L L +++ ++
Sbjct: 485 AELEMQLLLTRLIQHYE 501
>ref|XP_002692553.1| PREDICTED: cytochrome P450, family 24, subfamily A, polypeptide
1-like isoform 2 [Bos taurus].
Length = 448
Score = 180 bits (457), Expect = 3e-45
Identities = 129/438 (29%), Positives = 215/438 (49%), Gaps = 6/438 (1%)
Frame = +1
Query: 82 RSVLVKGCQPFLSAPRECPGHPRVGTGEGACISTKTPRPFSEIPSPGDNGWINLYRF--- 252
R V C P PRE P P + GE +T PG W L
Sbjct: 26 RPVTSTACSP--RRPREVPLCPVMEPGEAQDAATL----------PGPTKWPLLGSLLEI 73
Query: 253 -WKEKGTQKIHYHHVQNFQKYGPIYREKLGNLGSVYIIDPEDVALLFKFEGPNPERYNIP 429
WK G +K H V+ +KYG I+R KLG+ SV++ P + L++ E +P+R I
Sbjct: 74 LWKG-GLKKQHDTLVEYHKKYGKIFRMKLGSFDSVHLGSPCLLEALYRTESAHPQRLEIK 132
Query: 430 PWVAYHQHYQKPVGVLLKKSGAWKKDRLVLNTEVMAPEAIKNFIPLLDTVSQDFVGVLHR 609
PW AY + ++ G+L+ + W++ R ++M P I ++ V DF+G +
Sbjct: 133 PWKAYRDYREEGYGLLILEGEDWQRVRSAFQKKLMKPVEIMKLDDKINEVLADFMGRIDE 192
Query: 610 RIKQQGSGKFSGDIREDLFRFAFESITNVIFGERLGMLEEIVDPEAQKFIDAVYQMFHTS 789
++G + D+ +L +++FESI V++ +R G+L++ EA FI AV M
Sbjct: 193 LCDERGRIE---DLYTELNKWSFESICLVLYEKRFGLLQKNAGEEALNFIMAVKTMMSMF 249
Query: 790 VPMLNLPPDLFRLFRTKTWRDHVAAWDTIFNKAEKYTQNFYWDLRRKREFNNYPGI--LY 963
M+ P +L R T+ W+ H AWDTIF + N R +++ P + L
Sbjct: 250 GKMMVTPVELHRSLNTRVWQAHTQAWDTIFRSVKSCVDN------RLEKYSEQPSMDFLC 303
Query: 964 RLLGNDKLLSEDVKANVTEMLAGGVDTTSMTLQWHLYEMARSLNVQEMLREEVLNARRQA 1143
+ +++L +++ A VTE+ V+TT+ +L W LY ++R+ +VQ+ L +E+ + +
Sbjct: 304 DIYHHNQLSKKELYAAVTELQLAAVETTANSLMWILYNLSRNPHVQQKLFKEIQSVLPEN 363
Query: 1144 QGDTSKMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQVAVYAMG 1323
Q ++ L+ +P LKA +KE++RL+P R L +VL +Y +P + + V A
Sbjct: 364 QLPRAEDLRNMPYLKACLKESMRLNPTVPFTTRTLDKAMVLGEYALPKGIVRKYDVVATD 423
Query: 1324 RDPAFFSNPGQFDPTRWL 1377
+P + G P R L
Sbjct: 424 LEPVETLHLGNLVPGRQL 441
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 66,330,310
Number of extensions: 1984015
Number of successful extensions: 7364
Number of sequences better than 1.0e-05: 90
Number of HSP's gapped: 7229
Number of HSP's successfully gapped: 91
Length of query: 528
Length of database: 17,681,374
Length adjustment: 107
Effective length of query: 421
Effective length of database: 14,140,958
Effective search space: 5953343318
Effective search space used: 5953343318
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-006991
(1586 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_535539.2| PREDICTED: similar to Cytochrome P450 11A1, mit... 858 0.0
Alignment gi|XP_539192.2| PREDICTED: similar to Cytochrome P450 11B2, mit... 317 2e-86
Alignment gi|XP_538254.2| PREDICTED: similar to 25-hydroxyvitamin D-1 alp... 238 2e-62
Alignment gi|XP_543059.2| PREDICTED: similar to Cytochrome P450 24A1, mit... 220 3e-57
Alignment gi|XP_540989.2| PREDICTED: similar to cytochrome P450, family 2... 204 2e-52
Alignment gi|XP_853094.1| PREDICTED: similar to Cytochrome P450 27, mitoc... 195 1e-49
Alignment gi|XP_536868.2| PREDICTED: hypothetical protein XP_536868 [Cani... 101 2e-21
Alignment gi|NP_001003340.1| cytochrome P450 3A12 [Canis lupus familiaris]. 96 1e-19
Alignment gi|XP_849364.1| PREDICTED: similar to cytochrome P450, family 4... 95 2e-19
Alignment gi|NP_001003338.1| cytochrome P450 3A26 [Canis lupus familiaris]. 94 4e-19
>ref|XP_535539.2| PREDICTED: similar to Cytochrome P450 11A1, mitochondrial precursor
(CYPXIA1) (P450(scc)) (Cholesterol side-chain cleavage
enzyme) (Cholesterol desmolase) [Canis familiaris].
Length = 520
Score = 858 bits (2216), Expect(2) = 0.0
Identities = 416/497 (83%), Positives = 454/497 (91%)
Frame = +1
Query: 58 MLARGLALRSVLVKGCQPFLSAPRECPGHPRVGTGEGACISTKTPRPFSEIPSPGDNGWI 237
MLA+GL LRSVLVKGCQPFLS E PGHPRV TG+GA IST+ PRPFSEIP+PG+NGW+
Sbjct: 1 MLAKGLPLRSVLVKGCQPFLSTVWEGPGHPRVPTGDGASISTQIPRPFSEIPTPGNNGWL 60
Query: 238 NLYRFWKEKGTQKIHYHHVQNFQKYGPIYREKLGNLGSVYIIDPEDVALLFKFEGPNPER 417
NLY FW+E G+QKIHYH VQNFQKYGPIYREKLG++ SVYIIDPEDVALLFKFEGP PER
Sbjct: 61 NLYNFWREMGSQKIHYHQVQNFQKYGPIYREKLGSVESVYIIDPEDVALLFKFEGPTPER 120
Query: 418 YNIPPWVAYHQHYQKPVGVLLKKSGAWKKDRLVLNTEVMAPEAIKNFIPLLDTVSQDFVG 597
+ IPPWVAYHQ++Q+PVGVLLKKSGAWKKDRL LN EVMAPEAIKNFIPLLD VSQDFV
Sbjct: 121 FCIPPWVAYHQYHQRPVGVLLKKSGAWKKDRLALNQEVMAPEAIKNFIPLLDPVSQDFVK 180
Query: 598 VLHRRIKQQGSGKFSGDIREDLFRFAFESITNVIFGERLGMLEEIVDPEAQKFIDAVYQM 777
VLHRRIKQQGSGKFSGDI +DLFRFAFESITNV+FGERLGMLEE VDPEAQ+FIDAVYQM
Sbjct: 181 VLHRRIKQQGSGKFSGDISDDLFRFAFESITNVMFGERLGMLEERVDPEAQRFIDAVYQM 240
Query: 778 FHTSVPMLNLPPDLFRLFRTKTWRDHVAAWDTIFNKAEKYTQNFYWDLRRKREFNNYPGI 957
FHTSVPML PPDLFRLF+TKTWRDHVAAWD IFNKAE YTQNFYW+LR+KR+ +NYPGI
Sbjct: 241 FHTSVPMLTFPPDLFRLFKTKTWRDHVAAWDVIFNKAEIYTQNFYWELRQKRDVDNYPGI 300
Query: 958 LYRLLGNDKLLSEDVKANVTEMLAGGVDTTSMTLQWHLYEMARSLNVQEMLREEVLNARR 1137
L+RLL ++KLL EDVKAN+TEMLAGGVDTTSMTLQWHLYEMARSL VQE+LREEVL ARR
Sbjct: 301 LHRLLKSNKLLFEDVKANITEMLAGGVDTTSMTLQWHLYEMARSLEVQEVLREEVLAARR 360
Query: 1138 QAQGDTSKMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQVAVYA 1317
QAQG+ S MLQLVPLLKASIKETLRLHPISVTLQRYL NDLVLR+YMIPAKTLVQV+ YA
Sbjct: 361 QAQGNVSTMLQLVPLLKASIKETLRLHPISVTLQRYLENDLVLRNYMIPAKTLVQVSTYA 420
Query: 1318 MGRDPAFFSNPGQFDPTRWLGKERDLIHFRNLGFGWGVRQCVGRRIAELEMTLFLIHILE 1497
MG+DP FF NP +FDPTRWLGK+++LIHFRNLGFGWGVRQCVGRRIAELEMTLFLIHILE
Sbjct: 421 MGQDPTFFLNPSKFDPTRWLGKDKELIHFRNLGFGWGVRQCVGRRIAELEMTLFLIHILE 480
Query: 1498 DFQGELQHFXDVDTISN 1548
+F+ E+Q DV T N
Sbjct: 481 NFRVEMQQLRDVGTTFN 497
Score = 28.9 bits (63), Expect(2) = 0.0
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +3
Query: 1533 GHNIKLILMPDRPIFLVF 1586
G LILMPD+PIFL F
Sbjct: 493 GTTFNLILMPDKPIFLTF 510
>ref|XP_539192.2| PREDICTED: similar to Cytochrome P450 11B2, mitochondrial precursor
(CYPXIB2) (P-450Aldo) (Aldosterone synthase) (ALDOS)
(Aldosterone-synthesizing enzyme) (Steroid
18-hydroxylase) (P-450C18) [Canis familiaris].
Length = 593
Score = 317 bits (812), Expect = 2e-86
Identities = 167/461 (36%), Positives = 264/461 (57%)
Frame = +1
Query: 160 GEGACISTKTPRPFSEIPSPGDNGWINLYRFWKEKGTQKIHYHHVQNFQKYGPIYREKLG 339
G A + + PF +P N W+ + + W+++G++ +H + FQ+ GPI+R +G
Sbjct: 115 GTRAAPAPRAVLPFEAVPRCPGNKWMRVLQIWRQQGSESLHLEMHRTFQELGPIFRYDVG 174
Query: 340 NLGSVYIIDPEDVALLFKFEGPNPERYNIPPWVAYHQHYQKPVGVLLKKSGAWKKDRLVL 519
V+++ PEDV L + E P P R + PW+AY QH GV L W+ +RL L
Sbjct: 175 GTHMVHVMLPEDVERLQRVESPQPWRPPLDPWLAYRQHRGHKCGVFLLNGPEWRLNRLKL 234
Query: 520 NTEVMAPEAIKNFIPLLDTVSQDFVGVLHRRIKQQGSGKFSGDIREDLFRFAFESITNVI 699
N +V++ +A++ +IP++D V++DF L R+ Q G + DIR + + E+ + +
Sbjct: 235 NPDVLSLQAVQKYIPMVDGVARDFSQALRARVLQNARGSLTLDIRPSILYYTVEASSLAL 294
Query: 700 FGERLGMLEEIVDPEAQKFIDAVYQMFHTSVPMLNLPPDLFRLFRTKTWRDHVAAWDTIF 879
FGERLG+L P + F+ A+ M ++ +L LP L R + W++H +WD I
Sbjct: 295 FGERLGLLGPSPSPASLHFLQALEAMLRSTAQLLYLPRGLSRWTSARVWKEHFESWDYIV 354
Query: 880 NKAEKYTQNFYWDLRRKREFNNYPGILYRLLGNDKLLSEDVKANVTEMLAGGVDTTSMTL 1059
A + Q Y +L R +Y GI+ LL L E V+AN E+ AG VDTT+ L
Sbjct: 355 QYANEAIQRIYQELALGRP-QHYSGIVGELLLRADLSPEAVRANCIELTAGSVDTTAYPL 413
Query: 1060 QWHLYEMARSLNVQEMLREEVLNARRQAQGDTSKMLQLVPLLKASIKETLRLHPISVTLQ 1239
L+E+AR+ +VQ LR+E A+ + + +PLL+A++KETLRL+P+ +++
Sbjct: 414 WMTLFELARNPDVQHALRQESQGAQAGIAENPQTAVTELPLLRAALKETLRLYPVGISVD 473
Query: 1240 RYLVNDLVLRDYMIPAKTLVQVAVYAMGRDPAFFSNPGQFDPTRWLGKERDLIHFRNLGF 1419
R + +D+VL++Y IPA TLV+V +Y++GR+P+ F P ++ P RWL +L F
Sbjct: 474 RQVGSDVVLQNYHIPAGTLVKVQLYSLGRNPSVFERPERYHPQRWLDGRGSGTRAPSLAF 533
Query: 1420 GWGVRQCVGRRIAELEMTLFLIHILEDFQGELQHFXDVDTI 1542
G+GVRQC+GRR+AE EM L L H+L +F E DV +
Sbjct: 534 GFGVRQCLGRRLAETEMLLLLHHVLNNFLVETLTHEDVKMV 574
>ref|XP_538254.2| PREDICTED: similar to 25-hydroxyvitamin D-1 alpha hydroxylase,
mitochondrial precursor (Calcidiol 1-monooxygenase)
(25-OHD-1 alpha-hydroxylase) (25-hydroxyvitamin D(3)
1-alpha-hydroxylase) (VD3 1A hydroxylase) (P450C1 alpha)
(P450VD1-alpha) [Canis familiaris].
Length = 535
Score = 238 bits (606), Expect = 2e-62
Identities = 154/467 (32%), Positives = 237/467 (50%), Gaps = 13/467 (2%)
Frame = +1
Query: 145 PRVGTGEGACISTKTPRPFSEIPSPGDNGWINLYRFWKEKGTQKIHYHHVQNFQKYGPIY 324
P++G+ G+ S PR ++IP P + L + + G ++H VQ ++GP++
Sbjct: 46 PKLGSSLGSRGSDSAPRSLADIPGPSTP--VFLAELFCKGGLSRLHELQVQGVARFGPVW 103
Query: 325 REKLGNLGSVYIIDPEDVALLFKFEGPNPERYNIPPWVAYHQHYQKPVGVLLKKSGAWKK 504
G + +VY+ P V L + EGP PER + PW + +H Q+ G+L + ++
Sbjct: 104 LASFGKVRTVYVAAPALVEQLLRQEGPRPERCSFSPWAEHRRHRQRACGLLTAEGEEGQR 163
Query: 505 DRLVLNTEVMAPEAIKNFIPLLDTVSQDFVGVLHRRIKQQGSGKFSG------DIREDLF 666
R +L ++ P A + L V +D V RR++QQ G+ +G D+ + +
Sbjct: 164 LRSLLAPLLLRPRAAARYAAPLADVVRDLV----RRLRQQ-RGRGAGPPALVRDVAAEFY 218
Query: 667 RFAFESITNVIFGERLGMLEEIVDPEAQKFIDAVYQMFHTSVPMLNLPPDLFRLFRTKTW 846
+F E V+ G RLG LE V P+ FI AV +F +++ + +P L RL W
Sbjct: 219 KFGLEGTAAVLLGSRLGCLEAQVPPDTDAFIRAVGSVFVSTLLTMAMPGWLHRLV-PGPW 277
Query: 847 RDHVAAWDTIFNKAEKYTQNFYWDLRRKREFNNYPGI-----LYRLLGNDKLLSEDVKAN 1011
WD +F A+++ + ++ + E + L L ++L + + N
Sbjct: 278 GRLCRDWDQMFAFAQQHVERREAEVALRSEGKAAEDVGSGAHLTYFLLREELPAPSILGN 337
Query: 1012 VTEMLAGGVDTTSMTLQWHLYEMARSLNVQEMLREEVLNARRQAQG--DTSKMLQLVPLL 1185
VTE+L GVDT S TL W LYE+AR +VQ L E+ A ++ L +PLL
Sbjct: 338 VTELLLAGVDTVSNTLSWALYELARHPDVQTALHSEITAALGPGSSAHPSAAALSQLPLL 397
Query: 1186 KASIKETLRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQVAVYAMGRDPAFFSNPGQFDP 1365
KA +KE LRL+P+ R D+ + DY+IP TLV + YA RDPA F P F P
Sbjct: 398 KAVVKEVLRLYPVVPGNSRVPDKDIRVGDYIIPKNTLVTLCHYATSRDPAQFPEPNSFRP 457
Query: 1366 TRWLGKERDLIHFRNLGFGWGVRQCVGRRIAELEMTLFLIHILEDFQ 1506
RWLG+ F +L FG+G R C+GRR+AELE+ + L IL F+
Sbjct: 458 ARWLGEGPAPHPFASLPFGFGKRSCMGRRLAELELQMALAQILTHFE 504
>ref|XP_543059.2| PREDICTED: similar to Cytochrome P450 24A1, mitochondrial precursor
(P450-CC24) (Vitamin D(3) 24-hydroxylase)
(1,25-dihydroxyvitamin D(3) 24-hydroxylase) (24-OHase)
[Canis familiaris].
Length = 514
Score = 220 bits (561), Expect = 3e-57
Identities = 146/476 (30%), Positives = 242/476 (50%), Gaps = 2/476 (0%)
Frame = +1
Query: 82 RSVLVKGCQPFLSAPRECPGHPRVGTGEGACISTKTPRPFSEIPSPGDNGWINLYRFWKE 261
R V C P PRE P P V GE + R + P G L WK
Sbjct: 26 RPVASAACAP--PRPREVPLCPPVEPGEAQ--NAAALRGPTNWPLLGSL----LEILWKG 77
Query: 262 KGTQKIHYHHVQNFQKYGPIYREKLGNLGSVYIIDPEDVALLFKFEGPNPERYNIPPWVA 441
G +K H + +KYG I+R KLG+ SV++ P + L++ E +P+R I PW A
Sbjct: 78 -GLKKQHDTLAEYHKKYGKIFRMKLGSFDSVHLGSPCLLEALYRTESAHPQRLEIKPWKA 136
Query: 442 YHQHYQKPVGVLLKKSGAWKKDRLVLNTEVMAPEAIKNFIPLLDTVSQDFVGVLHRRIKQ 621
Y + ++ G+L+ + W++ R ++M P I ++ V DF+G + +
Sbjct: 137 YRDYREEGYGLLILEGEDWQRVRSAFQKKLMKPVEIMKLDNKINEVLADFMGRIDELCDE 196
Query: 622 QGSGKFSGDIREDLFRFAFESITNVIFGERLGMLEEIVDPEAQKFIDAVYQMFHTSVPML 801
+G + D+ +L +++FESI V++ +R G+L + EA FI A+ M T M+
Sbjct: 197 RGRIE---DLYSELNKWSFESICLVLYEKRFGLLRKNAGDEALNFIMAIKTMMSTFGRMM 253
Query: 802 NLPPDLFRLFRTKTWRDHVAAWDTIFNKAEKYTQNFYWDLRRKREFNNYPG--ILYRLLG 975
P +L + TK W+ H AWDTIF + N R +++ P L +
Sbjct: 254 VTPVELHKSLNTKVWQAHTLAWDTIFKSVKSCIDN------RLEKYSEQPSTDFLCDIYH 307
Query: 976 NDKLLSEDVKANVTEMLAGGVDTTSMTLQWHLYEMARSLNVQEMLREEVLNARRQAQGDT 1155
+++L +++ A VTE+ V+TT+ +L W LY ++R+ +VQ+ L +E+ + Q
Sbjct: 308 HNQLSKKELYAAVTELQLAAVETTANSLMWILYNLSRNPHVQQKLLKEIQRVLPENQMPR 367
Query: 1156 SKMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQVAVYAMGRDPA 1335
++ L+ +P LKA +KE++RL P R L + VL +Y +P T++ + +G +
Sbjct: 368 AEDLRNMPYLKACLKESMRLTPSVPFTTRTLDKETVLGEYALPKGTVLMLNTQVLGSNEE 427
Query: 1336 FFSNPGQFDPTRWLGKERDLIHFRNLGFGWGVRQCVGRRIAELEMTLFLIHILEDF 1503
F + QF P RWL +++ + F +L FG G R C+GRR+AEL++ L L I+ +
Sbjct: 428 NFKDSSQFRPERWLQEKKKINPFAHLPFGIGKRMCIGRRLAELQLHLALCWIIRKY 483
>ref|XP_540989.2| PREDICTED: similar to cytochrome P450, family 27, subfamily b,
polypeptide 1 [Canis familiaris].
Length = 490
Score = 204 bits (519), Expect = 2e-52
Identities = 138/458 (30%), Positives = 224/458 (48%), Gaps = 28/458 (6%)
Frame = +1
Query: 217 PGDNGWINLYRFWKEKGTQKIHY---------------------HHVQNFQKYGPIYREK 333
PG NL F+ + G +IH H ++ ++YG I++
Sbjct: 2 PGPRTLANLVEFFWKDGFGRIHEIQDFGSSEAARCSASEGRGRPHSQKHTREYGKIFKSH 61
Query: 334 LGNLGSVYIIDPEDVALLFKFEGPNPERYNIPPWVAYHQHYQKPVGVLLKKSGAWKKDRL 513
G V I D + VA + + EG P+R N+ W Y + G++ + W K R
Sbjct: 62 FGPQFVVSIADRDMVAQVLRAEGATPQRANMESWQEYRHLRGRSTGLISAEGEQWLKMRR 121
Query: 514 VLNTEVMAPEAIKNFIPLLDTVSQDFVGVLHRRIKQQGSGKFSGDIREDLFRFAFESITN 693
VL ++ P + F ++ V D + ++ Q G+ ++ E F+++ E +
Sbjct: 122 VLRQRILKPRDVAIFSGEINQVIADLIKRIYILKSQAEDGETVTNVNELFFKYSMEGVAT 181
Query: 694 VIFGERLGMLEEIVDPEAQKFIDAV---YQMFHTSVPMLNLPPDLFRLFRTKTWRDHVAA 864
+++ RLG LE V +I+A+ + MF TS+ +P L L K W + +
Sbjct: 182 ILYESRLGCLENSVPQPTVDYIEALGLMFSMFKTSMYAGAIPRWLRPLI-PKPWLEFCRS 240
Query: 865 WDTIFNKAEKYTQNFYWDLR--RKREFNNYPGILYRLLGNDKLLSEDVKANVTEMLAGGV 1038
WD +F ++ + N D++ R G+L L + +L E++ AN+TEML GV
Sbjct: 241 WDGLFKFSQIHVDNKLKDIQCHMDRGERVRGGLLTCLFLSQELTLEEIYANMTEMLLAGV 300
Query: 1039 DTTSMTLQWHLYEMARSLNVQEMLREEVLNARRQAQGDTSKMLQLVPLLKASIKETLRLH 1218
DTTS TL W +Y +AR VQ+ L +E++ + T+ + VPL++A +KETLRL
Sbjct: 301 DTTSFTLSWAVYLLARHPQVQQTLYQEIVKNLGERHIPTAADVPKVPLVRALLKETLRLF 360
Query: 1219 PISVTLQRYLVNDLVLRDYMIPAKTLVQVAVYAMGRDPAFFSNPGQFDPTRWL--GKERD 1392
P+ R DLV+ Y+IP T + + YA + F +F P RWL G
Sbjct: 361 PVLPGNGRVTQEDLVVGGYLIPKGTQLALCHYATSYEDENFPRAKEFWPERWLRKGSLDR 420
Query: 1393 LIHFRNLGFGWGVRQCVGRRIAELEMTLFLIHILEDFQ 1506
+ +F ++ FG+GVR C+GRRIAELE+ L +I +L+ F+
Sbjct: 421 VDNFGSIPFGYGVRSCIGRRIAELEIHLAIIQLLQHFE 458
>ref|XP_853094.1| PREDICTED: similar to Cytochrome P450 27, mitochondrial precursor
(Cytochrome P-450C27/25) (Sterol 26-hydroxylase) (Sterol
27-hydroxylase) (Vitamin D(3) 25-hydroxylase)
(5-beta-cholestane-3-alpha,7-alpha,12-alpha-triol
27-hydroxylase) [Canis familiaris].
Length = 528
Score = 195 bits (495), Expect = 1e-49
Identities = 140/491 (28%), Positives = 227/491 (46%), Gaps = 12/491 (2%)
Frame = +1
Query: 70 GLALRSVLVKGCQPF-LSAPRECPGHPRVGTGEGACISTKTPRPFSEIPSPGDNGWINLY 246
GL R K P + A E PG+ G GA + R E+P PG + L+
Sbjct: 18 GLCPRGARAKAAIPAAVPATAETPGN-----GPGA----RRLRTLEELPGPGQLRF--LF 66
Query: 247 RFWKEKGTQKIHYHHVQNFQKYGPIYREKLGNLGSVYIIDPEDVALLFKFEGPNPERYNI 426
+ + ++H V N KYGP++ G V + + + + EG P R ++
Sbjct: 67 QLLGQGYVLQLHKLQVLNKAKYGPMWVTHAGPQTHVNLASAPLLEQVMRQEGKYPVRNDM 126
Query: 427 PPWVAYHQHYQKPVGVLLKKSGAWKKDRLVLNTEVMAPEAIKNFIPLLDTVSQDFVGVLH 606
W + G + W + R LN ++ P + L+ V DF+ L
Sbjct: 127 ELWKEHRDQQGLAYGPFTTEGHHWYQLRHALNQRMLKPSEAALYTDALNEVVDDFMAHLS 186
Query: 607 RRIKQQGSGKFSGDIREDLFRFAFESITNVIFGERLGMLEEIVDPEAQKFIDAVYQMFHT 786
+ + + SG D+ + FA E+I ++F +R+G LE + + F+ +V MF
Sbjct: 187 QLLAESPSGNQVSDMAHQFYYFALEAICYILFEKRIGCLERPIPQDTVAFVRSVGLMFQN 246
Query: 787 SVPMLNLPPDLFRLFRTKTWRDHVAAWDTIFNKAEKYTQNFYWDLRRKREFN-----NYP 951
SV + LP L W+ ++ W+TIF+ +K ++ + +
Sbjct: 247 SVYVTFLPKWTRPLL--PFWKRYLDGWNTIFSFGKKLIDQKLKEIETQLQTKGPDEVEIS 304
Query: 952 GILYRLLGNDKLLSEDVKANVTEMLAGGVDTTSMTLQWHLYEMARSLNVQEMLREEVLNA 1131
G L+ LL +L + + ++ E+L GVDTTS T+ W LY ++++ +Q L +EV+
Sbjct: 305 GYLHFLLTRGQLSTREAMGSLPELLLAGVDTTSNTMTWALYHLSKNPEIQAALHKEVVGV 364
Query: 1132 RRQAQGDTSKMLQLVPLLKASIKETLRLHPISVTLQRYLV-NDLVLRDYMIPAKTLVQVA 1308
Q K +PLLKA +KETLRL+P+ R + ++ + ++ P T
Sbjct: 365 VPPGQVPQQKDFAHMPLLKAVLKETLRLYPVVPINSRVITEKEIEVNGFLFPKNTQFVFC 424
Query: 1309 VYAMGRDPAFFSNPGQFDPTRWLGKER---DLIH--FRNLGFGWGVRQCVGRRIAELEMT 1473
Y + RDP F P F P RWL K + +H F ++ FG+GVR C+GRRIAELEM
Sbjct: 425 HYVVSRDPDIFPEPESFQPYRWLRKSQLAAPGVHHAFGSVPFGYGVRACLGRRIAELEMQ 484
Query: 1474 LFLIHILEDFQ 1506
L L +++ +Q
Sbjct: 485 LLLSRLIQQYQ 495
>ref|XP_536868.2| PREDICTED: hypothetical protein XP_536868 [Canis familiaris].
Length = 503
Score = 101 bits (251), Expect = 2e-21
Identities = 98/424 (23%), Positives = 189/424 (44%), Gaps = 23/424 (5%)
Frame = +1
Query: 301 FQKYGPIYREKLGNLGSVYIIDPEDVALLFKFEGPNPERYNIPPWVAYHQHYQKPVGVL- 477
F+KYG ++ G + I DP+ + + E Y+ V ++ PVG +
Sbjct: 65 FRKYGRMWGFYDGRQPVLAITDPDMIKTVLV-----KECYS----VFTNRRSFGPVGFMK 115
Query: 478 ----LKKSGAWKKDRLVLNTEVMAPEAIKNFIPLLDTVSQDFVGVLHRRIKQQGSGKFSG 645
L + WK+ R +L+ + + +K P++ + VL R ++++ S
Sbjct: 116 SAISLSEDEEWKRIRTLLSPTFTSGK-LKEMFPIIG----QYGDVLVRNLRKEAEKGKSI 170
Query: 646 DIREDLFRFAFESITNVIFGERLGMLEEIVDPEAQKFIDAVYQM--------FHTSVPML 801
++++ ++ + IT+ FG + L DP F++ + ++ F S+ +
Sbjct: 171 NLKDIFGAYSMDVITSTSFGVNIDSLNNPQDP----FVENIKKLLKFDFLDPFFFSILLF 226
Query: 802 NLPPDLFRLFRTKTWRDHVAAWDTIFNKAEKYTQNFYWDLRRKR---------EFNNYPG 954
+F + W + D ++ +N D ++ R N+
Sbjct: 227 PFLTPVFEVLNI--WLFPKSVTDFFTKSVKRMKENRLKDKQKHRVDFLQLMINSQNSKET 284
Query: 955 ILYRLLGNDKLLSEDVKANVTEMLAGGVDTTSMTLQWHLYEMARSLNVQEMLREEVLNAR 1134
++ L + +L+++ + + G +TTS +L + +YE+A +VQ+ L+EE+
Sbjct: 285 DTHKALSDLELVAQSII-----FIFAGYETTSTSLSFLMYELATHPDVQQKLQEEIDATF 339
Query: 1135 RQAQGDTSKMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQVAVY 1314
T L + L + ETLRL+PI+ L+R D+ + IP T+V V +
Sbjct: 340 PNKALPTYDALVQMEYLDMVLNETLRLYPIAGRLERVCKKDVEISGVFIPKGTVVMVPTF 399
Query: 1315 AMGRDPAFFSNPGQFDPTRWLGKERDLIH-FRNLGFGWGVRQCVGRRIAELEMTLFLIHI 1491
+ RD + + P +F P R+ K +D I+ + L FG G R C+G R A + M L L+ +
Sbjct: 400 TLHRDQSLWPEPEEFRPERFSRKNKDSINPYTYLPFGTGPRNCIGMRFAIMNMKLALVRV 459
Query: 1492 LEDF 1503
L++F
Sbjct: 460 LQNF 463
>ref|NP_001003340.1| cytochrome P450 3A12 [Canis lupus familiaris].
Length = 503
Score = 95.9 bits (237), Expect = 1e-19
Identities = 101/421 (23%), Positives = 183/421 (43%), Gaps = 20/421 (4%)
Frame = +1
Query: 301 FQKYGPIYREKLGNLGSVYIIDPEDVALLFKFEGPNPERYNIPPWVAYHQHYQKPVGVL- 477
F KYG ++ G + I DP+ + + E Y+ V ++ PVG +
Sbjct: 65 FSKYGRMWGFYDGRQPVLAITDPDMIKTVLV-----KECYS----VFTNRRTLGPVGFMK 115
Query: 478 ----LKKSGAWKKDRLVLNTEVMAPEAIKNFIPLLDTVSQDFVGVLHRRIKQQGSGKFSG 645
L + WK+ R +L+ + +K P++ V L K+ GK +
Sbjct: 116 SAISLSEDEEWKRMRTLLSPTFTTGK-LKEMFPIIGQYGDVLVNNLR---KEAEKGK-AI 170
Query: 646 DIREDLFRFAFESITNVIFGERLGMLEEIVDPEAQK--------FIDAVYQMFHTSVPML 801
++++ ++ + IT+ FG + L DP + F+D F S+ +
Sbjct: 171 NLKDVFGAYSMDVITSTSFGVNIDSLNHPQDPFVENTKKLLKFDFLDP----FFFSILLF 226
Query: 802 NLPPDLFRLFRTKTWRDHVAAWDTIFNKAEKYTQNFYWDLRRKREFNNYPGILY-----R 966
+F + W D E+ ++ D ++ R ++ ++ +
Sbjct: 227 PFLTPVFEILNI--WLFPKKVTDFFRKSVERMKESRLKDKQKHRV--DFLQLMINSQNSK 282
Query: 967 LLGNDKLLSE-DVKANVTEMLAGGVDTTSMTLQWHLYEMARSLNVQEMLREEVLNARRQA 1143
+ K LS+ ++ A + G +TTS +L + +YE+A +VQ+ L+EE+
Sbjct: 283 EMDTHKALSDLELVAQSIIFIFAGYETTSTSLSFLMYELATHPDVQQKLQEEIDATFPNK 342
Query: 1144 QGDTSKMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQVAVYAMG 1323
T L + L + ETLRL+PI+ L+R D+ + IP T+V V + +
Sbjct: 343 ALPTYDALVQMEYLDMVLNETLRLYPIAGRLERVCKKDVEISGVFIPKGTVVMVPTFTLH 402
Query: 1324 RDPAFFSNPGQFDPTRWLGKERDLIH-FRNLGFGWGVRQCVGRRIAELEMTLFLIHILED 1500
RD + + P +F P R+ K +D I+ + L FG G R C+G R A + M L L+ +L++
Sbjct: 403 RDQSLWPEPEEFRPERFSRKNKDSINPYTYLPFGTGPRNCIGMRFAIMNMKLALVRVLQN 462
Query: 1501 F 1503
F
Sbjct: 463 F 463
>ref|XP_849364.1| PREDICTED: similar to cytochrome P450, family 4, subfamily v,
polypeptide 2 [Canis familiaris].
Length = 575
Score = 94.7 bits (234), Expect = 2e-19
Identities = 99/421 (23%), Positives = 172/421 (40%), Gaps = 25/421 (5%)
Frame = +1
Query: 316 PIYREKLGNLGSVYIIDPEDVALLFKFEGPNPERYN---IPPWVAYHQHYQKPVGVLLKK 486
P+ + LG + V I E+V ++ + Y + PW+ +G+L
Sbjct: 138 PLLKLWLGPIPIVAIYSAENVEVILTSSRQIDKSYVYKFLEPWLG--------LGLLTST 189
Query: 487 SGAWKKDRLVLNTEVMAPEAIKNFIPLLDTVSQDFVGVLHRRIKQQGSGKFSGDIREDLF 666
W+ R +L T +++F+ +++ + V L + + Q+ F +
Sbjct: 190 GNKWRSRRKML-TPTFHFTILEDFLDVMNEHANILVNKLEKHVNQEAFNCFFY-----IT 243
Query: 667 RFAFESITNVIFGERLGMLEEIVDPEAQKFIDAVYQMFHTSVPMLNLP----PDLFRLFR 834
A + I G+ +G E +++ A+Y+M T + +P LF +F
Sbjct: 244 LCALDIICETAMGKNIGAQNN----EDSEYVRAIYRMSDTIHRRMKMPWLWLDFLFLMF- 298
Query: 835 TKTWRDHVAAWDTIFNKAEKYTQNFYWDLRRKREF-----------NNYPGILYRLLG-- 975
K R+H + + N +L+R E N L LL
Sbjct: 299 -KEGREHKRNLEILHNFTNNVITERASELKRDEEHGSADKDCSPSKNKRRAFLDLLLNVT 357
Query: 976 ---NDKLLSEDVKANVTEMLAGGVDTTSMTLQWHLYEMARSLNVQEMLREEVLNA-RRQA 1143
+KL EDV+ V + G DTT+ + W LY + VQ+ + E+ + +
Sbjct: 358 DDEGNKLRHEDVREEVDTFMFEGHDTTAAAINWSLYLLGSYPEVQKQVDSELEDVFGKSD 417
Query: 1144 QGDTSKMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQVAVYAMG 1323
+ T + L+ + L+ IKE+LRL P R L D V+ Y + + + YA+
Sbjct: 418 RPATLEDLKKLKYLECVIKESLRLFPSVPLFARNLNEDCVVAGYKVVKGSQAIIIPYALH 477
Query: 1324 RDPAFFSNPGQFDPTRWLGKERDLIH-FRNLGFGWGVRQCVGRRIAELEMTLFLIHILED 1500
RDP +F NP +F P R+ + H + + F G R C+G+R A +E L +L
Sbjct: 478 RDPRYFPNPEEFQPERFFPENLQGRHPYAYIPFSAGPRNCIGQRFAIMEEKTVLSCVLRH 537
Query: 1501 F 1503
F
Sbjct: 538 F 538
>ref|NP_001003338.1| cytochrome P450 3A26 [Canis lupus familiaris].
Length = 503
Score = 94.0 bits (232), Expect = 4e-19
Identities = 98/415 (23%), Positives = 182/415 (43%), Gaps = 14/415 (3%)
Frame = +1
Query: 301 FQKYGPIYREKLGNLGSVYIIDPEDVALLFKFEGPNPERYNIPPWVAYHQHYQKPVGVL- 477
F KYG ++ G + I DP+ + + E Y+ V ++ PVG +
Sbjct: 65 FSKYGRMWGFYDGRQPVLAITDPDMIKTVLV-----KECYS----VFTNRRTLGPVGFMK 115
Query: 478 ----LKKSGAWKKDRLVLNTEVMAPEAIKNFIPLLDTVSQDFVGVLHRRIKQQGSGKFSG 645
L + WK+ R +L+ + +K P++ V L K+ GK +
Sbjct: 116 SAISLSEDEEWKRIRTLLSPTFTTGK-LKEMFPIIGQYGDVLVNNLR---KEAEKGK-AI 170
Query: 646 DIREDLFRFAFESITNVIFGERLGMLEEIVDPEAQKFIDAV-YQMFHTSVPMLNLPPDLF 822
++++ ++ + IT++ FG + L DP + + + + + + L P L
Sbjct: 171 NLKDVFGAYSMDVITSISFGVNIDSLNHPQDPFVENTKNLLKFDFLDPFLFSILLFPFLT 230
Query: 823 RLFRT-KTWRDHVAAWDTIFNKAEKYTQNFYWDLRRKREFNNYPGILY-----RLLGNDK 984
+F W D E+ ++ D ++ R ++ ++ + + K
Sbjct: 231 PVFEILNIWLFPKKVTDFFRKSVERMKESRLKDKQKHRV--DFLQLMINSQNSKEMDTHK 288
Query: 985 LLSE-DVKANVTEMLAGGVDTTSMTLQWHLYEMARSLNVQEMLREEVLNARRQAQGDTSK 1161
LS+ ++ A + G +TTS L + +YE+A +VQ+ L+EE+ T +
Sbjct: 289 ALSDLELVAQSIVFIFAGYETTSSCLSFLMYELATHRDVQQKLQEEIDATFPNKAAPTYE 348
Query: 1162 MLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQVAVYAMGRDPAFF 1341
L + L + ETLRL+ ++ L+R D+ + IP T+V V + + RD +
Sbjct: 349 ALVQMEYLDMVLNETLRLYSVAGRLERVCKKDVEISGVFIPKGTVVMVPTFILHRDQNLW 408
Query: 1342 SNPGQFDPTRWLGKERDLIH-FRNLGFGWGVRQCVGRRIAELEMTLFLIHILEDF 1503
P +F P R+ K +D I+ + L FG G R C+G R A + M L L+ +L++F
Sbjct: 409 PEPEEFRPERFSRKNKDSINPYTYLPFGTGPRNCIGMRFAIMNMKLALVRVLQNF 463
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 69,224,561
Number of extensions: 2049007
Number of successful extensions: 6956
Number of sequences better than 1.0e-05: 52
Number of HSP's gapped: 6894
Number of HSP's successfully gapped: 53
Length of query: 528
Length of database: 18,874,504
Length adjustment: 107
Effective length of query: 421
Effective length of database: 15,307,552
Effective search space: 6444479392
Effective search space used: 6444479392
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-006991
(1586 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_000772.2| cholesterol side-chain cleavage enzyme, mitocho... 816 0.0
Alignment gi|NP_001093243.1| cholesterol side-chain cleavage enzyme, mito... 550 e-156
Alignment gi|NP_000488.3| cytochrome P450 11B1, mitochondrial isoform 1 p... 334 2e-91
Alignment gi|NP_000489.3| cytochrome P450 11B2, mitochondrial precursor [... 330 2e-90
Alignment gi|NP_001021384.1| cytochrome P450 11B1, mitochondrial isoform ... 265 7e-71
Alignment gi|NP_000776.1| 25-hydroxyvitamin D-1 alpha hydroxylase, mitoch... 229 5e-60
Alignment gi|NP_000773.2| 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mito... 220 3e-57
Alignment gi|NP_000775.1| sterol 26-hydroxylase, mitochondrial precursor ... 194 3e-49
Alignment gi|NP_001122387.1| 1,25-dihydroxyvitamin D(3) 24-hydroxylase, m... 179 5e-45
Alignment gi|NP_001001665.3| cytochrome P450 27C1 [Homo sapiens]. 170 4e-42
>ref|NP_000772.2| cholesterol side-chain cleavage enzyme, mitochondrial isoform a
precursor [Homo sapiens].
Length = 521
Score = 816 bits (2107), Expect = 0.0
Identities = 392/498 (78%), Positives = 444/498 (89%), Gaps = 1/498 (0%)
Frame = +1
Query: 58 MLARGLALRSVLVKGCQPFLSAPRECPGHPRVGTGEGACISTKTPRPFSEIPSPGDNGWI 237
MLA+GL RSVLVKGCQ FLSAPRE G RV TGEGA IST++PRPF+EIPSPGDNGW+
Sbjct: 1 MLAKGLPPRSVLVKGCQTFLSAPREGLGRLRVPTGEGAGISTRSPRPFNEIPSPGDNGWL 60
Query: 238 NLYRFWKEKGTQKIHYHHVQNFQKYGPIYREKLGNLGSVYIIDPEDVALLFKFEGPNPER 417
NLY FW+E GT K+H HHVQNFQKYGPIYREKLGN+ SVY+IDPEDVALLFK EGPNPER
Sbjct: 61 NLYHFWRETGTHKVHLHHVQNFQKYGPIYREKLGNVESVYVIDPEDVALLFKSEGPNPER 120
Query: 418 YNIPPWVAYHQHYQKPVGVLLKKSGAWKKDRLVLNTEVMAPEAIKNFIPLLDTVSQDFVG 597
+ IPPWVAYHQ+YQ+P+GVLLKKS AWKKDR+ LN EVMAPEA KNF+PLLD VS+DFV
Sbjct: 121 FLIPPWVAYHQYYQRPIGVLLKKSAAWKKDRVALNQEVMAPEATKNFLPLLDAVSRDFVS 180
Query: 598 VLHRRIKQQGSGKFSGDIREDLFRFAFESITNVIFGERLGMLEEIVDPEAQKFIDAVYQM 777
VLHRRIK+ GSG +SGDI +DLFRFAFESITNVIFGER GMLEE+V+PEAQ+FIDA+YQM
Sbjct: 181 VLHRRIKKAGSGNYSGDISDDLFRFAFESITNVIFGERQGMLEEVVNPEAQRFIDAIYQM 240
Query: 778 FHTSVPMLNLPPDLFRLFRTKTWRDHVAAWDTIFNKAEKYTQNFYWDLRRKRE-FNNYPG 954
FHTSVPMLNLPPDLFRLFRTKTW+DHVAAWD IF+KA+ YTQNFYW+LR+K ++Y G
Sbjct: 241 FHTSVPMLNLPPDLFRLFRTKTWKDHVAAWDVIFSKADIYTQNFYWELRQKGSVHHDYRG 300
Query: 955 ILYRLLGNDKLLSEDVKANVTEMLAGGVDTTSMTLQWHLYEMARSLNVQEMLREEVLNAR 1134
ILYRLLG+ K+ ED+KANVTEMLAGGVDTTSMTLQWHLYEMAR+L VQ+MLR EVL AR
Sbjct: 301 ILYRLLGDSKMSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEVLAAR 360
Query: 1135 RQAQGDTSKMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQVAVY 1314
QAQGD + MLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQVA+Y
Sbjct: 361 HQAQGDMATMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQVAIY 420
Query: 1315 AMGRDPAFFSNPGQFDPTRWLGKERDLIHFRNLGFGWGVRQCVGRRIAELEMTLFLIHIL 1494
A+GR+P FF +P FDPTRWL K++++ +FRNLGFGWGVRQC+GRRIAELEMT+FLI++L
Sbjct: 421 ALGREPTFFFDPENFDPTRWLSKDKNITYFRNLGFGWGVRQCLGRRIAELEMTIFLINML 480
Query: 1495 EDFQGELQHFXDVDTISN 1548
E+F+ E+QH DV T N
Sbjct: 481 ENFRVEIQHLSDVGTTFN 498
>ref|NP_001093243.1| cholesterol side-chain cleavage enzyme, mitochondrial isoform b [Homo
sapiens].
Length = 363
Score = 550 bits (1417), Expect = e-156
Identities = 267/340 (78%), Positives = 305/340 (89%), Gaps = 1/340 (0%)
Frame = +1
Query: 532 MAPEAIKNFIPLLDTVSQDFVGVLHRRIKQQGSGKFSGDIREDLFRFAFESITNVIFGER 711
MAPEA KNF+PLLD VS+DFV VLHRRIK+ GSG +SGDI +DLFRFAFESITNVIFGER
Sbjct: 1 MAPEATKNFLPLLDAVSRDFVSVLHRRIKKAGSGNYSGDISDDLFRFAFESITNVIFGER 60
Query: 712 LGMLEEIVDPEAQKFIDAVYQMFHTSVPMLNLPPDLFRLFRTKTWRDHVAAWDTIFNKAE 891
GMLEE+V+PEAQ+FIDA+YQMFHTSVPMLNLPPDLFRLFRTKTW+DHVAAWD IF+KA+
Sbjct: 61 QGMLEEVVNPEAQRFIDAIYQMFHTSVPMLNLPPDLFRLFRTKTWKDHVAAWDVIFSKAD 120
Query: 892 KYTQNFYWDLRRKREFNN-YPGILYRLLGNDKLLSEDVKANVTEMLAGGVDTTSMTLQWH 1068
YTQNFYW+LR+K ++ Y GILYRLLG+ K+ ED+KANVTEMLAGGVDTTSMTLQWH
Sbjct: 121 IYTQNFYWELRQKGSVHHDYRGILYRLLGDSKMSFEDIKANVTEMLAGGVDTTSMTLQWH 180
Query: 1069 LYEMARSLNVQEMLREEVLNARRQAQGDTSKMLQLVPLLKASIKETLRLHPISVTLQRYL 1248
LYEMAR+L VQ+MLR EVL AR QAQGD + MLQLVPLLKASIKETLRLHPISVTLQRYL
Sbjct: 181 LYEMARNLKVQDMLRAEVLAARHQAQGDMATMLQLVPLLKASIKETLRLHPISVTLQRYL 240
Query: 1249 VNDLVLRDYMIPAKTLVQVAVYAMGRDPAFFSNPGQFDPTRWLGKERDLIHFRNLGFGWG 1428
VNDLVLRDYMIPAKTLVQVA+YA+GR+P FF +P FDPTRWL K++++ +FRNLGFGWG
Sbjct: 241 VNDLVLRDYMIPAKTLVQVAIYALGREPTFFFDPENFDPTRWLSKDKNITYFRNLGFGWG 300
Query: 1429 VRQCVGRRIAELEMTLFLIHILEDFQGELQHFXDVDTISN 1548
VRQC+GRRIAELEMT+FLI++LE+F+ E+QH DV T N
Sbjct: 301 VRQCLGRRIAELEMTIFLINMLENFRVEIQHLSDVGTTFN 340
>ref|NP_000488.3| cytochrome P450 11B1, mitochondrial isoform 1 precursor [Homo
sapiens].
Length = 503
Score = 334 bits (856), Expect = 2e-91
Identities = 175/461 (37%), Positives = 267/461 (57%)
Frame = +1
Query: 160 GEGACISTKTPRPFSEIPSPGDNGWINLYRFWKEKGTQKIHYHHVQNFQKYGPIYREKLG 339
G A +T PF +P N W+ L + W+E+G + +H Q FQ+ GPI+R LG
Sbjct: 25 GTRAARVPRTVLPFEAMPRRPGNRWLRLLQIWREQGYEDLHLEVHQTFQELGPIFRYDLG 84
Query: 340 NLGSVYIIDPEDVALLFKFEGPNPERYNIPPWVAYHQHYQKPVGVLLKKSGAWKKDRLVL 519
G V ++ PEDV L + + +P R ++ PWVAY QH GV L W+ +RL L
Sbjct: 85 GAGMVCVMLPEDVEKLQQVDSLHPHRMSLEPWVAYRQHRGHKCGVFLLNGPEWRFNRLRL 144
Query: 520 NTEVMAPEAIKNFIPLLDTVSQDFVGVLHRRIKQQGSGKFSGDIREDLFRFAFESITNVI 699
N EV++P A++ F+P++D V++DF L +++ Q G + D++ +F + E+ +
Sbjct: 145 NPEVLSPNAVQRFLPMVDAVARDFSQALKKKVLQNARGSLTLDVQPSIFHYTIEASNLAL 204
Query: 700 FGERLGMLEEIVDPEAQKFIDAVYQMFHTSVPMLNLPPDLFRLFRTKTWRDHVAAWDTIF 879
FGERLG++ + F+ A+ MF ++V ++ +P L R K W++H AWD IF
Sbjct: 205 FGERLGLVGHSPSSASLNFLHALEVMFKSTVQLMFMPRSLSRWTSPKVWKEHFEAWDCIF 264
Query: 880 NKAEKYTQNFYWDLRRKREFNNYPGILYRLLGNDKLLSEDVKANVTEMLAGGVDTTSMTL 1059
+ Q Y +L R Y I+ LL N +L + +KAN E+ AG VDTT L
Sbjct: 265 QYGDNCIQKIYQELAFSRP-QQYTSIVAELLLNAELSPDAIKANSMELTAGSVDTTVFPL 323
Query: 1060 QWHLYEMARSLNVQEMLREEVLNARRQAQGDTSKMLQLVPLLKASIKETLRLHPISVTLQ 1239
L+E+AR+ NVQ+ LR+E L A K +PLL+A++KETLRL+P+ + L+
Sbjct: 324 LMTLFELARNPNVQQALRQESLAAAASISEHPQKATTELPLLRAALKETLRLYPVGLFLE 383
Query: 1240 RYLVNDLVLRDYMIPAKTLVQVAVYAMGRDPAFFSNPGQFDPTRWLGKERDLIHFRNLGF 1419
R +DLVL++Y IPA TLV+V +Y++GR+PA F P +++P RWL +F ++ F
Sbjct: 384 RVASSDLVLQNYHIPAGTLVRVFLYSLGRNPALFPRPERYNPQRWLDIRGSGRNFYHVPF 443
Query: 1420 GWGVRQCVGRRIAELEMTLFLIHILEDFQGELQHFXDVDTI 1542
G+G+RQC+GRR+AE EM L L H+L+ Q E D+ +
Sbjct: 444 GFGMRQCLGRRLAEAEMLLLLHHVLKHLQVETLTQEDIKMV 484
>ref|NP_000489.3| cytochrome P450 11B2, mitochondrial precursor [Homo sapiens].
Length = 503
Score = 330 bits (846), Expect = 2e-90
Identities = 173/461 (37%), Positives = 270/461 (58%)
Frame = +1
Query: 160 GEGACISTKTPRPFSEIPSPGDNGWINLYRFWKEKGTQKIHYHHVQNFQKYGPIYREKLG 339
G A + +T PF +P N W+ L + W+E+G + +H Q FQ+ GPI+R LG
Sbjct: 25 GTRAARAPRTVLPFEAMPQHPGNRWLRLLQIWREQGYEHLHLEMHQTFQELGPIFRYNLG 84
Query: 340 NLGSVYIIDPEDVALLFKFEGPNPERYNIPPWVAYHQHYQKPVGVLLKKSGAWKKDRLVL 519
V ++ PEDV L + + +P R + PWVAY QH GV L W+ +RL L
Sbjct: 85 GPRMVCVMLPEDVEKLQQVDSLHPCRMILEPWVAYRQHRGHKCGVFLLNGPEWRFNRLRL 144
Query: 520 NTEVMAPEAIKNFIPLLDTVSQDFVGVLHRRIKQQGSGKFSGDIREDLFRFAFESITNVI 699
N +V++P+A++ F+P++D V++DF L +++ Q G + D++ +F + E+ +
Sbjct: 145 NPDVLSPKAVQRFLPMVDAVARDFSQALKKKVLQNARGSLTLDVQPSIFHYTIEASNLAL 204
Query: 700 FGERLGMLEEIVDPEAQKFIDAVYQMFHTSVPMLNLPPDLFRLFRTKTWRDHVAAWDTIF 879
FGERLG++ + F+ A+ MF ++V ++ +P L R K W++H AWD IF
Sbjct: 205 FGERLGLVGHSPSSASLNFLHALEVMFKSTVQLMFMPRSLSRWISPKVWKEHFEAWDCIF 264
Query: 880 NKAEKYTQNFYWDLRRKREFNNYPGILYRLLGNDKLLSEDVKANVTEMLAGGVDTTSMTL 1059
+ Q Y +L R +Y GI+ LL +L E +KAN E+ AG VDTT+ L
Sbjct: 265 QYGDNCIQKIYQELAFNRP-QHYTGIVAELLLKAELSLEAIKANSMELTAGSVDTTAFPL 323
Query: 1060 QWHLYEMARSLNVQEMLREEVLNARRQAQGDTSKMLQLVPLLKASIKETLRLHPISVTLQ 1239
L+E+AR+ +VQ++LR+E L A K +PLL+A++KETLRL+P+ + L+
Sbjct: 324 LMTLFELARNPDVQQILRQESLAAAASISEHPQKATTELPLLRAALKETLRLYPVGLFLE 383
Query: 1240 RYLVNDLVLRDYMIPAKTLVQVAVYAMGRDPAFFSNPGQFDPTRWLGKERDLIHFRNLGF 1419
R + +DLVL++Y IPA TLVQV +Y++GR+ A F P +++P RWL +F ++ F
Sbjct: 384 RVVSSDLVLQNYHIPAGTLVQVFLYSLGRNAALFPRPERYNPQRWLDIRGSGRNFHHVPF 443
Query: 1420 GWGVRQCVGRRIAELEMTLFLIHILEDFQGELQHFXDVDTI 1542
G+G+RQC+GRR+AE EM L L H+L+ F E D+ +
Sbjct: 444 GFGMRQCLGRRLAEAEMLLLLHHVLKHFLVETLTQEDIKMV 484
>ref|NP_001021384.1| cytochrome P450 11B1, mitochondrial isoform 2 precursor [Homo
sapiens].
Length = 437
Score = 265 bits (678), Expect = 7e-71
Identities = 144/405 (35%), Positives = 222/405 (54%), Gaps = 5/405 (1%)
Frame = +1
Query: 160 GEGACISTKTPRPFSEIPSPGDNGWINLYRFWKEKGTQKIHYHHVQNFQKYGPIYREKLG 339
G A +T PF +P N W+ L + W+E+G + +H Q FQ+ GPI+R LG
Sbjct: 25 GTRAARVPRTVLPFEAMPRRPGNRWLRLLQIWREQGYEDLHLEVHQTFQELGPIFRYDLG 84
Query: 340 NLGSVYIIDPEDVALLFKFEGPNPERYNIPPWVAYHQHYQKPVGVLLKKSGAWKKDRLVL 519
G V ++ PEDV L + + +P R ++ PWVAY QH GV L W+ +RL L
Sbjct: 85 GAGMVCVMLPEDVEKLQQVDSLHPHRMSLEPWVAYRQHRGHKCGVFLLNGPEWRFNRLRL 144
Query: 520 NTEVMAPEAIKNFIPLLDTVSQDFVGVLHRRIKQQGSGKFSGDIREDLFRFAFESITNVI 699
N EV++P A++ F+P++D V++DF L +++ Q G + D++ +F + E+ +
Sbjct: 145 NPEVLSPNAVQRFLPMVDAVARDFSQALKKKVLQNARGSLTLDVQPSIFHYTIEASNLAL 204
Query: 700 FGERLGMLEEIVDPEAQKFIDAVYQMFHTSVPMLNLPPDLFRLFRTKTWRDHVAAWDTIF 879
FGERLG++ + F+ A+ MF ++V ++ +P L R K W++H AWD IF
Sbjct: 205 FGERLGLVGHSPSSASLNFLHALEVMFKSTVQLMFMPRSLSRWTSPKVWKEHFEAWDCIF 264
Query: 880 NKAEKYTQNFYWDLRRKREFNNYPGILYRLLGNDKLLSEDVKANVTEMLAGGVDTTSMTL 1059
+ Q Y +L R Y I+ LL N +L + +KAN E+ AG VDTT L
Sbjct: 265 QYGDNCIQKIYQELAFSRP-QQYTSIVAELLLNAELSPDAIKANSMELTAGSVDTTVFPL 323
Query: 1060 QWHLYEMARSLNVQEMLREEVLNARRQAQGDTSKMLQLVPLLKASIKETLRLHPISVTLQ 1239
L+E+AR+ NVQ+ LR+E L A K +PLL+A++KETLRL+P+ + L+
Sbjct: 324 LMTLFELARNPNVQQALRQESLAAAASISEHPQKATTELPLLRAALKETLRLYPVGLFLE 383
Query: 1240 RYLVNDLVLRDYMIPAKTLVQVAVYAMGRDP-----AFFSNPGQF 1359
R +DLVL++Y IPA L + V + ++ +F P F
Sbjct: 384 RVASSDLVLQNYHIPAGVLKHLQVETLTQEDIKMVYSFILRPSMF 428
>ref|NP_000776.1| 25-hydroxyvitamin D-1 alpha hydroxylase, mitochondrial [Homo
sapiens].
Length = 508
Score = 229 bits (584), Expect = 5e-60
Identities = 152/468 (32%), Positives = 229/468 (48%), Gaps = 14/468 (2%)
Frame = +1
Query: 145 PRVGTGEGACISTKTPRPFSEIPSPGDNGWINLYRFWKEKGTQKIHYHHVQNFQKYGPIY 324
P +G G R ++IP P + L + + G ++H VQ +GP++
Sbjct: 19 PELGASLGYREYHSARRSLADIPGPSTPSF--LAELFCKGGLSRLHELQVQGAAHFGPVW 76
Query: 325 REKLGNLGSVYIIDPEDVALLFKFEGPNPERYNIPPWVAYHQHYQKPVGVLLKKSGAWKK 504
G + +VY+ P V L + EGP PER + PW + + Q+ G+L + W++
Sbjct: 77 LASFGTVRTVYVAAPALVEELLRQEGPRPERCSFSPWTEHRRCRQRACGLLTAEGEEWQR 136
Query: 505 DRLVLNTEVMAPEAIKNFIPLLDTVSQDFVGVLHR-RIKQQGSGKFSGDIREDLFRFAFE 681
R +L ++ P+A + L+ V D V L R R + G D+ + ++F E
Sbjct: 137 LRSLLAPLLLRPQAAARYAGTLNNVVCDLVRRLRRQRGRGTGPPALVRDVAGEFYKFGLE 196
Query: 682 SITNVIFGERLGMLEEIVDPEAQKFIDAVYQMFHTSVPMLNLPPDLFRLFRTKTWRDHVA 861
I V+ G RLG LE V P+ + FI AV +F +++ + +P L L W
Sbjct: 197 GIAAVLLGSRLGCLEAQVPPDTETFIRAVGSVFVSTLLTMAMPHWLRHLV-PGPWGRLCR 255
Query: 862 AWDTIFNKAEKYTQNFYWDLRRKREFNNYPG-----------ILYRLLGNDKLLSEDVKA 1008
WD +F A+++ + RR+ E G L L ++L ++ +
Sbjct: 256 DWDQMFAFAQRHVE------RREAEAAMRNGGQPEKDLESGAHLTHFLFREELPAQSILG 309
Query: 1009 NVTEMLAGGVDTTSMTLQWHLYEMARSLNVQEMLREEVLNARRQAQG--DTSKMLQLVPL 1182
NVTE+L GVDT S TL W LYE++R VQ L E+ A ++ +L +PL
Sbjct: 310 NVTELLLAGVDTVSNTLSWALYELSRHPEVQTALHSEITAALSPGSSAYPSATVLSQLPL 369
Query: 1183 LKASIKETLRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQVAVYAMGRDPAFFSNPGQFD 1362
LKA +KE LRL+P+ R D+ + DY+IP TLV + YA RDPA F P F
Sbjct: 370 LKAVVKEVLRLYPVVPGNSRVPDKDIHVGDYIIPKNTLVTLCHYATSRDPAQFPEPNSFR 429
Query: 1363 PTRWLGKERDLIHFRNLGFGWGVRQCVGRRIAELEMTLFLIHILEDFQ 1506
P RWLG+ F +L FG+G R C+GRR+AELE+ + L IL F+
Sbjct: 430 PARWLGEGPTPHPFASLPFGFGKRSCMGRRLAELELQMALAQILTHFE 477
>ref|NP_000773.2| 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial isoform 1
precursor [Homo sapiens].
Length = 514
Score = 220 bits (560), Expect = 3e-57
Identities = 140/465 (30%), Positives = 235/465 (50%), Gaps = 5/465 (1%)
Frame = +1
Query: 124 PRECPGHPRVGTGEGACISTKTPRPFSEIPSPGDNGWI---NLYRFWKEKGTQKIHYHHV 294
PRE P P GE + PG W +L + + G +K H V
Sbjct: 38 PREVPVCPLTAGGETQ----------NAAALPGPTSWPLLGSLLQILWKGGLKKQHDTLV 87
Query: 295 QNFQKYGPIYREKLGNLGSVYIIDPEDVALLFKFEGPNPERYNIPPWVAYHQHYQKPVGV 474
+ +KYG I+R KLG+ SV++ P + L++ E P+R I PW AY + ++ G+
Sbjct: 88 EYHKKYGKIFRMKLGSFESVHLGSPCLLEALYRTESAYPQRLEIKPWKAYRDYRKEGYGL 147
Query: 475 LLKKSGAWKKDRLVLNTEVMAPEAIKNFIPLLDTVSQDFVGVLHRRIKQQGSGKFSGDIR 654
L+ + W++ R ++M P + ++ V DF+G + ++G + D+
Sbjct: 148 LILEGEDWQRVRSAFQKKLMKPGEVMKLDNKINEVLADFMGRIDELCDERGHVE---DLY 204
Query: 655 EDLFRFAFESITNVIFGERLGMLEEIVDPEAQKFIDAVYQMFHTSVPMLNLPPDLFRLFR 834
+L +++FESI V++ +R G+L++ EA FI A+ M T M+ P +L +
Sbjct: 205 SELNKWSFESICLVLYEKRFGLLQKNAGDEAVNFIMAIKTMMSTFGRMMVTPVELHKSLN 264
Query: 835 TKTWRDHVAAWDTIFNKAEKYTQNFYWDLRRKREFNNYPG--ILYRLLGNDKLLSEDVKA 1008
TK W+DH AWDTIF + N R +++ P L + ++L +++ A
Sbjct: 265 TKVWQDHTLAWDTIFKSVKACIDN------RLEKYSQQPSADFLCDIYHQNRLSKKELYA 318
Query: 1009 NVTEMLAGGVDTTSMTLQWHLYEMARSLNVQEMLREEVLNARRQAQGDTSKMLQLVPLLK 1188
VTE+ V+TT+ +L W LY ++R+ VQ+ L +E+ + + Q ++ L+ +P LK
Sbjct: 319 AVTELQLAAVETTANSLMWILYNLSRNPQVQQKLLKEIQSVLPENQVPRAEDLRNMPYLK 378
Query: 1189 ASIKETLRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQVAVYAMGRDPAFFSNPGQFDPT 1368
A +KE++RL P R L VL +Y +P T++ + +G F + QF P
Sbjct: 379 ACLKESMRLTPSVPFTTRTLDKATVLGEYALPKGTVLMLNTQVLGSSEDNFEDSSQFRPE 438
Query: 1369 RWLGKERDLIHFRNLGFGWGVRQCVGRRIAELEMTLFLIHILEDF 1503
RWL ++ + F +L FG G R C+GRR+AEL++ L L I+ +
Sbjct: 439 RWLQEKEKINPFAHLPFGVGKRMCIGRRLAELQLHLALCWIVRKY 483
>ref|NP_000775.1| sterol 26-hydroxylase, mitochondrial precursor [Homo sapiens].
Length = 531
Score = 194 bits (492), Expect = 3e-49
Identities = 134/490 (27%), Positives = 220/490 (44%), Gaps = 10/490 (2%)
Frame = +1
Query: 67 RGLALRSVLVKGCQPFLSAPRECPGHPRVGTGEGACISTKTPRPFSEIPSPGDNGWINLY 246
RGL K P + G P G G + R EIP G + +
Sbjct: 18 RGLCPHGARAKAAIPAALPSDKATGAPGAGPGV-----RRRQRSLEEIPRLGQLRFF--F 70
Query: 247 RFWKEKGTQKIHYHHVQNFQKYGPIYREKLGNLGSVYIIDPEDVALLFKFEGPNPERYNI 426
+ + + ++H V KYGP++ LG V + + + + EG P R ++
Sbjct: 71 QLFVQGYALQLHQLQVLYKAKYGPMWMSYLGPQMHVNLASAPLLEQVMRQEGKYPVRNDM 130
Query: 427 PPWVAYHQHYQKPVGVLLKKSGAWKKDRLVLNTEVMAPEAIKNFIPLLDTVSQDFVGVLH 606
W + + G + W + R LN ++ P + + V DF+ L
Sbjct: 131 ELWKEHRDQHDLTYGPFTTEGHHWYQLRQALNQRLLKPAEAALYTDAFNEVIDDFMTRLD 190
Query: 607 RRIKQQGSGKFSGDIREDLFRFAFESITNVIFGERLGMLEEIVDPEAQKFIDAVYQMFHT 786
+ + SG D+ + + FA E+I ++F +R+G L+ + + F+ ++ MF
Sbjct: 191 QLRAESASGNQVSDMAQLFYYFALEAICYILFEKRIGCLQRSIPEDTVTFVRSIGLMFQN 250
Query: 787 SVPMLNLPPDLFRLFRTKTWRDHVAAWDTIFNKAEKYTQNFYWDLRRKREFNNYPGI--- 957
S+ LP + W+ ++ W+ IF+ +K D+ + + GI
Sbjct: 251 SLYATFLPKWTRPVL--PFWKRYLDGWNAIFSFGKKLIDEKLEDMEAQLQAAGPDGIQVS 308
Query: 958 --LYRLLGNDKLLSEDVKANVTEMLAGGVDTTSMTLQWHLYEMARSLNVQEMLREEVLNA 1131
L+ LL + +L + ++ E+L GVDTTS TL W LY +++ +QE L EEV+
Sbjct: 309 GYLHFLLASGQLSPREAMGSLPELLMAGVDTTSNTLTWALYHLSKDPEIQEALHEEVVGV 368
Query: 1132 RRQAQGDTSKMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQVAV 1311
Q K +PLLKA +KETLRL+P+ T R + ++ + ++ P T
Sbjct: 369 VPAGQVPQHKDFAHMPLLKAVLKETLRLYPVVPTNSRIIEKEIEVDGFLFPKNTQFVFCH 428
Query: 1312 YAMGRDPAFFSNPGQFDPTRWLGKERDLI-----HFRNLGFGWGVRQCVGRRIAELEMTL 1476
Y + RDP FS P F P RWL + F ++ FG+GVR C+GRRIAELEM L
Sbjct: 429 YVVSRDPTAFSEPESFQPHRWLRNSQPATPRIQHPFGSVPFGYGVRACLGRRIAELEMQL 488
Query: 1477 FLIHILEDFQ 1506
L +++ ++
Sbjct: 489 LLARLIQKYK 498
>ref|NP_001122387.1| 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial isoform 2
precursor [Homo sapiens].
Length = 448
Score = 179 bits (455), Expect = 5e-45
Identities = 121/423 (28%), Positives = 207/423 (48%), Gaps = 5/423 (1%)
Frame = +1
Query: 124 PRECPGHPRVGTGEGACISTKTPRPFSEIPSPGDNGWI---NLYRFWKEKGTQKIHYHHV 294
PRE P P GE + PG W +L + + G +K H V
Sbjct: 38 PREVPVCPLTAGGETQ----------NAAALPGPTSWPLLGSLLQILWKGGLKKQHDTLV 87
Query: 295 QNFQKYGPIYREKLGNLGSVYIIDPEDVALLFKFEGPNPERYNIPPWVAYHQHYQKPVGV 474
+ +KYG I+R KLG+ SV++ P + L++ E P+R I PW AY + ++ G+
Sbjct: 88 EYHKKYGKIFRMKLGSFESVHLGSPCLLEALYRTESAYPQRLEIKPWKAYRDYRKEGYGL 147
Query: 475 LLKKSGAWKKDRLVLNTEVMAPEAIKNFIPLLDTVSQDFVGVLHRRIKQQGSGKFSGDIR 654
L+ + W++ R ++M P + ++ V DF+G + ++G + D+
Sbjct: 148 LILEGEDWQRVRSAFQKKLMKPGEVMKLDNKINEVLADFMGRIDELCDERGHVE---DLY 204
Query: 655 EDLFRFAFESITNVIFGERLGMLEEIVDPEAQKFIDAVYQMFHTSVPMLNLPPDLFRLFR 834
+L +++FESI V++ +R G+L++ EA FI A+ M T M+ P +L +
Sbjct: 205 SELNKWSFESICLVLYEKRFGLLQKNAGDEAVNFIMAIKTMMSTFGRMMVTPVELHKSLN 264
Query: 835 TKTWRDHVAAWDTIFNKAEKYTQNFYWDLRRKREFNNYPG--ILYRLLGNDKLLSEDVKA 1008
TK W+DH AWDTIF + N R +++ P L + ++L +++ A
Sbjct: 265 TKVWQDHTLAWDTIFKSVKACIDN------RLEKYSQQPSADFLCDIYHQNRLSKKELYA 318
Query: 1009 NVTEMLAGGVDTTSMTLQWHLYEMARSLNVQEMLREEVLNARRQAQGDTSKMLQLVPLLK 1188
VTE+ V+TT+ +L W LY ++R+ VQ+ L +E+ + + Q ++ L+ +P LK
Sbjct: 319 AVTELQLAAVETTANSLMWILYNLSRNPQVQQKLLKEIQSVLPENQVPRAEDLRNMPYLK 378
Query: 1189 ASIKETLRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQVAVYAMGRDPAFFSNPGQFDPT 1368
A +KE++RL P R L VL +Y +P + + + A +P + G P+
Sbjct: 379 ACLKESMRLTPSVPFTTRTLDKATVLGEYALPKGIVRKYDIQATDNEPVEMLHSGTLVPS 438
Query: 1369 RWL 1377
R L
Sbjct: 439 REL 441
>ref|NP_001001665.3| cytochrome P450 27C1 [Homo sapiens].
Length = 372
Score = 170 bits (430), Expect = 4e-42
Identities = 108/340 (31%), Positives = 181/340 (53%), Gaps = 7/340 (2%)
Frame = +1
Query: 508 RLVLNTEVMAPEAIKNFIPLLDTVSQDFVGVLHRRIKQQGSGKFSGDIREDLFRFAFESI 687
R VL ++ P+ + + ++ V D + ++ Q G+ ++ + F+++ E +
Sbjct: 2 RSVLRQRILKPKDVAIYSGEVNQVIADLIKRIYLLRSQAEDGETVTNVNDLFFKYSMEGV 61
Query: 688 TNVIFGERLGMLEEIVDPEAQKFIDAV---YQMFHTSVPMLNLPPDLFRLFRTKTWRDHV 858
+++ RLG LE + ++I+A+ + MF TS+ +P L R F K WR+
Sbjct: 62 ATILYESRLGCLENSIPQLTVEYIEALELMFSMFKTSMYAGAIPRWL-RPFIPKPWREFC 120
Query: 859 AAWDTIFNKAEKYTQNFYWDLRRKREFNNYP--GILYRLLGNDKLLSEDVKANVTEMLAG 1032
+WD +F ++ + N D++ + + G+L L + L +++ ANVTEML
Sbjct: 121 RSWDGLFKFSQIHVDNKLRDIQYQMDRGRRVSGGLLTYLFLSQALTLQEIYANVTEMLLA 180
Query: 1033 GVDTTSMTLQWHLYEMARSLNVQEMLREEVLNARRQAQGDTSKMLQLVPLLKASIKETLR 1212
GVDTTS TL W +Y +AR VQ+ + E++ + T+ + VPL++A +KETLR
Sbjct: 181 GVDTTSFTLSWTVYLLARHPEVQQTVYREIVKNLGERHVPTAADVPKVPLVRALLKETLR 240
Query: 1213 LHPISVTLQRYLVNDLVLRDYMIPAKTLVQVAVYAMGRDPAFFSNPGQFDPTRWLGK-ER 1389
L P+ R DLV+ Y+IP T + + YA F +F P RWL K +
Sbjct: 241 LFPVLPGNGRVTQEDLVIGGYLIPKGTQLALCHYATSYQDENFPRAKEFRPERWLRKGDL 300
Query: 1390 DLI-HFRNLGFGWGVRQCVGRRIAELEMTLFLIHILEDFQ 1506
D + +F ++ FG GVR C+GRRIAELE+ L +I +L+ F+
Sbjct: 301 DRVDNFGSIPFGHGVRSCIGRRIAELEIHLVVIQLLQHFE 340
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 67,863,061
Number of extensions: 2010201
Number of successful extensions: 7159
Number of sequences better than 1.0e-05: 74
Number of HSP's gapped: 7068
Number of HSP's successfully gapped: 74
Length of query: 528
Length of database: 18,297,164
Length adjustment: 107
Effective length of query: 421
Effective length of database: 14,770,016
Effective search space: 6218176736
Effective search space used: 6218176736
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-006991
(1586 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_062753.3| cholesterol side-chain cleavage enzyme, mitocho... 774 0.0
Alignment gi|NP_034121.3| cytochrome P450 11B2, mitochondrial [Mus muscul... 336 3e-92
Alignment gi|NP_001028401.2| cytochrome P450, family 11, subfamily b, pol... 324 1e-88
Alignment gi|NP_034139.2| 25-hydroxyvitamin D-1 alpha hydroxylase, mitoch... 230 2e-60
Alignment gi|NP_034126.1| 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mito... 227 2e-59
Alignment gi|NP_077226.2| sterol 26-hydroxylase, mitochondrial [Mus muscu... 202 8e-52
Alignment gi|NP_031845.1| cytochrome P450 3A13 [Mus musculus]. 108 9e-24
Alignment gi|NP_031844.1| cytochrome P450 3A11 [Mus musculus]. 100 5e-21
Alignment gi|NP_796354.1| cytochrome P450, family 3, subfamily a, polypep... 99 1e-20
Alignment gi|NP_062766.2| cytochrome P450 3A25 [Mus musculus]. 98 2e-20
>ref|NP_062753.3| cholesterol side-chain cleavage enzyme, mitochondrial precursor [Mus
musculus].
Length = 526
Score = 774 bits (1999), Expect = 0.0
Identities = 369/494 (74%), Positives = 431/494 (87%)
Frame = +1
Query: 58 MLARGLALRSVLVKGCQPFLSAPRECPGHPRVGTGEGACISTKTPRPFSEIPSPGDNGWI 237
MLA+GL+LRSVLVKGCQPFLS + P + TG+GA ST +PR F+EIPSPGDNGW+
Sbjct: 1 MLAKGLSLRSVLVKGCQPFLSPTWQ---GPVLSTGKGAGTSTSSPRSFNEIPSPGDNGWL 57
Query: 238 NLYRFWKEKGTQKIHYHHVQNFQKYGPIYREKLGNLGSVYIIDPEDVALLFKFEGPNPER 417
NLY FW+E GTQKIHYH +Q+FQKYGPIYREKLG L SVYI+DP+D ++LF EGPNPER
Sbjct: 58 NLYHFWRESGTQKIHYHQMQSFQKYGPIYREKLGTLESVYIVDPKDASILFSCEGPNPER 117
Query: 418 YNIPPWVAYHQHYQKPVGVLLKKSGAWKKDRLVLNTEVMAPEAIKNFIPLLDTVSQDFVG 597
+ +PPWVAYHQ+YQ+P+GVL K S AWKKDR+VLN EVMAP AIKNF+PLL+ V+QDF+
Sbjct: 118 FLVPPWVAYHQYYQRPIGVLFKSSDAWKKDRIVLNQEVMAPGAIKNFVPLLEGVAQDFIK 177
Query: 598 VLHRRIKQQGSGKFSGDIREDLFRFAFESITNVIFGERLGMLEEIVDPEAQKFIDAVYQM 777
VLHRRIKQQ SG FSG I +DLFRF+FESI++VIFGER+GMLEEIVDPEAQ+FI+AVYQM
Sbjct: 178 VLHRRIKQQNSGNFSGVISDDLFRFSFESISSVIFGERMGMLEEIVDPEAQRFINAVYQM 237
Query: 778 FHTSVPMLNLPPDLFRLFRTKTWRDHVAAWDTIFNKAEKYTQNFYWDLRRKREFNNYPGI 957
FHTSVPMLNLPPD FRL RTKTW+DH AAWD IFNKA++YTQNFYWDLR+KR+F+ YPG+
Sbjct: 238 FHTSVPMLNLPPDFFRLLRTKTWKDHAAAWDVIFNKADEYTQNFYWDLRQKRDFSQYPGV 297
Query: 958 LYRLLGNDKLLSEDVKANVTEMLAGGVDTTSMTLQWHLYEMARSLNVQEMLREEVLNARR 1137
LY LLG +KL ++++AN+TEMLAGGVDTTSMTLQW+LYEMA +L VQEMLR EVL ARR
Sbjct: 298 LYSLLGGNKLPFKNIQANITEMLAGGVDTTSMTLQWNLYEMAHNLKVQEMLRAEVLAARR 357
Query: 1138 QAQGDTSKMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQVAVYA 1317
QAQGD +KM+QLVPLLKASIKETLRLHPISVTLQRY VNDLVLR+Y IPAKTLVQVA +A
Sbjct: 358 QAQGDMAKMVQLVPLLKASIKETLRLHPISVTLQRYTVNDLVLRNYKIPAKTLVQVASFA 417
Query: 1318 MGRDPAFFSNPGQFDPTRWLGKERDLIHFRNLGFGWGVRQCVGRRIAELEMTLFLIHILE 1497
MGRDP FF NP +FDPTRWL K ++ HFR LGFGWGVRQC+GRRIAELEMT+ LI++LE
Sbjct: 418 MGRDPGFFPNPNKFDPTRWLEKSQNTTHFRYLGFGWGVRQCLGRRIAELEMTILLINLLE 477
Query: 1498 DFQGELQHFXDVDT 1539
+F+ E+Q+ DV T
Sbjct: 478 NFRIEVQNLRDVGT 491
>ref|NP_034121.3| cytochrome P450 11B2, mitochondrial [Mus musculus].
Length = 502
Score = 336 bits (862), Expect = 3e-92
Identities = 180/474 (37%), Positives = 281/474 (59%)
Frame = +1
Query: 112 FLSAPRECPGHPRVGTGEGACISTKTPRPFSEIPSPGDNGWINLYRFWKEKGTQKIHYHH 291
+L+ P +C R G A ++ KT +PF IP N W+ + + +E+G + +H
Sbjct: 12 WLARPWQCLHRTRA-LGTTATLAPKTLQPFEAIPQYSRNKWLKMIQILREQGQENLHLEM 70
Query: 292 VQNFQKYGPIYREKLGNLGSVYIIDPEDVALLFKFEGPNPERYNIPPWVAYHQHYQKPVG 471
Q F++ GPI+R +G V ++ PED L + E P R ++ PWVA+ + G
Sbjct: 71 HQVFRELGPIFRHSVGKTQIVSVMLPEDAEKLHQVESMLPRRMHLEPWVAHRELRGLRRG 130
Query: 472 VLLKKSGAWKKDRLVLNTEVMAPEAIKNFIPLLDTVSQDFVGVLHRRIKQQGSGKFSGDI 651
V L W+ +RL LN V++P+A++ F+P++D V++DF+ L ++ Q G + D+
Sbjct: 131 VFLLNGPEWRLNRLRLNRNVLSPKAVQKFVPMVDMVARDFLETLKEKVLQNARGSLTMDV 190
Query: 652 REDLFRFAFESITNVIFGERLGMLEEIVDPEAQKFIDAVYQMFHTSVPMLNLPPDLFRLF 831
++ LF + E+ +FGERLG+L + P + KFI A++ MF ++ +L LP L R
Sbjct: 191 QQSLFNYTIEASNFALFGERLGLLGHDLSPGSLKFIHALHSMFKSTSQLLFLPKSLTRWT 250
Query: 832 RTKTWRDHVAAWDTIFNKAEKYTQNFYWDLRRKREFNNYPGILYRLLGNDKLLSEDVKAN 1011
T+ W++H AWD I A + + +LR Y GI+ L+ L + +KAN
Sbjct: 251 STRVWKEHFDAWDVISEYANRCIWKVHQELRLGSS-QTYSGIVAELISQGSLPLDAIKAN 309
Query: 1012 VTEMLAGGVDTTSMTLQWHLYEMARSLNVQEMLREEVLNARRQAQGDTSKMLQLVPLLKA 1191
E+ AG VDTT++ L L+E+AR+ +VQ+ LR+E L A + K + +PLL+A
Sbjct: 310 SMELTAGSVDTTAIPLVMTLFELARNPDVQKALRQESLAAEASIAANPQKAMSDLPLLRA 369
Query: 1192 SIKETLRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQVAVYAMGRDPAFFSNPGQFDPTR 1371
++KETLRL+P+ L+R L +DLVL++Y +PA TLV + +Y+MGR+PA F P ++ P R
Sbjct: 370 ALKETLRLYPVGGFLERILSSDLVLQNYHVPAGTLVLLYLYSMGRNPAVFPRPERYMPQR 429
Query: 1372 WLGKERDLIHFRNLGFGWGVRQCVGRRIAELEMTLFLIHILEDFQGELQHFXDV 1533
WL ++R F++L FG+GVRQC+GRR+AE+EM L L HIL+ FQ E DV
Sbjct: 430 WLERKRS---FQHLAFGFGVRQCLGRRLAEVEMMLLLHHILKTFQVETLRQEDV 480
>ref|NP_001028401.2| cytochrome P450, family 11, subfamily b, polypeptide 1 [Mus
musculus].
Length = 501
Score = 324 bits (830), Expect = 1e-88
Identities = 171/474 (36%), Positives = 277/474 (58%)
Frame = +1
Query: 112 FLSAPRECPGHPRVGTGEGACISTKTPRPFSEIPSPGDNGWINLYRFWKEKGTQKIHYHH 291
+L+ P +C R G A ++ KT +PF IP N W+ + + +E+G + +H
Sbjct: 12 WLARPWQCLHRTRA-LGTTATLAPKTLQPFEAIPQYSRNKWLKMIQILREQGQENLHLEM 70
Query: 292 VQNFQKYGPIYREKLGNLGSVYIIDPEDVALLFKFEGPNPERYNIPPWVAYHQHYQKPVG 471
Q F++ GPI+R +G V++ PEDV L++ E +P R + W+ + + G
Sbjct: 71 HQVFRELGPIFRHSVGKTQIVFVTLPEDVEKLYQVESTHPCRMPLESWIVHRELRGLGRG 130
Query: 472 VLLKKSGAWKKDRLVLNTEVMAPEAIKNFIPLLDTVSQDFVGVLHRRIKQQGSGKFSGDI 651
V L W +RL LN V++P+A++ F+PL+D +++DFV L +++ + G FS D
Sbjct: 131 VFLLNGPEWYFNRLQLNPNVLSPKAVQKFVPLVDGIARDFVDNLKKKMLESVHGSFSMDF 190
Query: 652 REDLFRFAFESITNVIFGERLGMLEEIVDPEAQKFIDAVYQMFHTSVPMLNLPPDLFRLF 831
+ +F + E+ V+FGERLG++ + P++ KF+ ++ MF T+ +L LP L R
Sbjct: 191 QSSVFNYTIEASHFVLFGERLGLIGRDLSPDSLKFLHTLHSMFKTTTQLLYLPRSLTRWT 250
Query: 832 RTKTWRDHVAAWDTIFNKAEKYTQNFYWDLRRKREFNNYPGILYRLLGNDKLLSEDVKAN 1011
T+ W++++ +WD I K +N Y +L R + L+ L + ++AN
Sbjct: 251 STRVWKENLESWDFISEYVTKCIKNVYRELAEGRP--QSWSVTAELVAERTLSMDAIQAN 308
Query: 1012 VTEMLAGGVDTTSMTLQWHLYEMARSLNVQEMLREEVLNARRQAQGDTSKMLQLVPLLKA 1191
E++AG DTTS L +E+AR+ +VQ+ LR+E L A + K + +PLL+A
Sbjct: 309 SMELIAGSTDTTSTPLVMTFFELARNPDVQQALRQESLAAEASIAANPQKAMSDLPLLRA 368
Query: 1192 SIKETLRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQVAVYAMGRDPAFFSNPGQFDPTR 1371
++KETLRL+P+ L+R L +DLVL++Y +PA T++ V +Y+MGR+PA F P ++ P R
Sbjct: 369 ALKETLRLYPVGTFLERILSSDLVLQNYHVPAGTVLNVNLYSMGRNPAVFPRPERYMPQR 428
Query: 1372 WLGKERDLIHFRNLGFGWGVRQCVGRRIAELEMTLFLIHILEDFQGELQHFXDV 1533
WL ++R F++L FG+GVRQC+GRR+AE EM L L H+L+ F E Q DV
Sbjct: 429 WLERKRS---FKHLAFGFGVRQCLGRRLAEAEMMLLLHHVLKSFHVETQEKEDV 479
>ref|NP_034139.2| 25-hydroxyvitamin D-1 alpha hydroxylase, mitochondrial [Mus
musculus].
Length = 507
Score = 230 bits (587), Expect = 2e-60
Identities = 149/446 (33%), Positives = 225/446 (50%), Gaps = 8/446 (1%)
Frame = +1
Query: 193 RPFSEIPSPGDNGWINLYRFWKEKGTQKIHYHHVQNFQKYGPIYREKLGNLGSVYIIDPE 372
R S+IP P + L + + G ++H V +YGPI+ G L +VY+ DP
Sbjct: 35 RSLSDIPGPSTLSF--LAELFCKGGLSRLHELQVHGAARYGPIWSGSFGTLRTVYVADPT 92
Query: 373 DVALLFKFEGPNPERYNIPPWVAYHQHYQKPVGVLLKKSGAWKKDRLVLNTEVMAPEAIK 552
V L + E PER + W + + +Q+ G+L W++ R +L ++ P+A
Sbjct: 93 LVEQLLRQESHCPERCSFSSWAEHRRRHQRACGLLTADGEEWQRLRSLLAPLLLRPQAAA 152
Query: 553 NFIPLLDTVSQDFVGVLHRRIKQQGSGK--FSGDIREDLFRFAFESITNVIFGERLGMLE 726
+ LD V +D V L RR + +GSG D+ + ++F ESI V+ G RLG LE
Sbjct: 153 GYAGTLDNVVRDLVRRL-RRQRGRGSGLPGLVLDVAGEFYKFGLESIGAVLLGSRLGCLE 211
Query: 727 EIVDPEAQKFIDAVYQMFHTSVPMLNLPPDLFRLFRTKTWRDHVAAWDTIFNKAEKYTQN 906
V P+ + FI AV +F +++ + +P L L W WD +F A+++ +
Sbjct: 212 AEVPPDTETFIHAVGSVFVSTLLTMAMPNWLHHLI-PGPWARLCRDWDQMFAFAQRHVEL 270
Query: 907 FYWDLRRKREFNNYPGI-----LYRLLGNDKLLSEDVKANVTEMLAGGVDTTSMTLQWHL 1071
+ + + + L L +K+ + + NVTE+L GVDT S TL W L
Sbjct: 271 REGEAAMRNQGKPEEDMPSGHHLTHFLFREKVSVQSIVGNVTELLLAGVDTVSNTLSWTL 330
Query: 1072 YEMARSLNVQEMLREEVL-NARRQAQGDTSKMLQLVPLLKASIKETLRLHPISVTLQRYL 1248
YE++R +VQ L E+ R L +PLLKA IKE LRL+P+ R
Sbjct: 331 YELSRHPDVQTALHSEITAGTRGSCAHPHGTALSQLPLLKAVIKEVLRLYPVVPGNSRVP 390
Query: 1249 VNDLVLRDYMIPAKTLVQVAVYAMGRDPAFFSNPGQFDPTRWLGKERDLIHFRNLGFGWG 1428
D+ + +Y+IP TLV + YA RDP F +P F+P RWLG+ F +L FG+G
Sbjct: 391 DRDIRVGNYVIPQDTLVSLCHYATSRDPTQFPDPNSFNPARWLGEGPTPHPFASLPFGFG 450
Query: 1429 VRQCVGRRIAELEMTLFLIHILEDFQ 1506
R C+GRR+AELE+ + L IL F+
Sbjct: 451 KRSCIGRRLAELELQMALSQILTHFE 476
>ref|NP_034126.1| 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial precursor
[Mus musculus].
Length = 514
Score = 227 bits (579), Expect = 2e-59
Identities = 143/467 (30%), Positives = 237/467 (50%), Gaps = 6/467 (1%)
Frame = +1
Query: 121 APRECPGHPRVGTGEGACISTKTPRPFSEIPSPGDNGWINLYR----FWKEKGTQKIHYH 288
AP+E P P + GE +++ PG W L FWK G +K H
Sbjct: 37 APKEVPLCPLMTDGETRNVTSL----------PGPTNWPLLGSLLEIFWKG-GLKKQHDT 85
Query: 289 HVQNFQKYGPIYREKLGNLGSVYIIDPEDVALLFKFEGPNPERYNIPPWVAYHQHYQKPV 468
+ +KYG I+R KLG+ SV++ P + L++ E +P+R I PW AY H +
Sbjct: 86 LAEYHKKYGQIFRMKLGSFDSVHLGSPSLLEALYRTESAHPQRLEIKPWKAYRDHRNEAY 145
Query: 469 GVLLKKSGAWKKDRLVLNTEVMAPEAIKNFIPLLDTVSQDFVGVLHRRIKQQGSGKFSGD 648
G+++ + W++ R ++M P I ++ V DF+G + ++G + D
Sbjct: 146 GLMILEGQEWQRVRSAFQKKLMKPVEIMKLDKKINEVLADFMGQIDELRDERGRIQ---D 202
Query: 649 IREDLFRFAFESITNVIFGERLGMLEEIVDPEAQKFIDAVYQMFHTSVPMLNLPPDLFRL 828
+ +L +++FESI V++ +R G+L++ + EA FI A+ M T M+ P +L +
Sbjct: 203 LYSELNKWSFESICLVLYEKRFGLLQKDTEEEALTFIAAIKTMMSTFGKMMVTPVELHKR 262
Query: 829 FRTKTWRDHVAAWDTIFNKAEKYTQNFYWDLRRKREFNNYPG--ILYRLLGNDKLLSEDV 1002
TK W+ H AWDTIF + + R ++ PG L + D L +++
Sbjct: 263 LNTKVWQAHTLAWDTIFKSVKPCIDH------RLERYSQQPGADFLCDIYQQDHLSKKEL 316
Query: 1003 KANVTEMLAGGVDTTSMTLQWHLYEMARSLNVQEMLREEVLNARRQAQGDTSKMLQLVPL 1182
A VTE+ V+TT+ +L W LY ++R+ VQ+ L E+ + Q ++ ++ +P
Sbjct: 317 YAAVTELQLAAVETTANSLMWILYNLSRNPQVQQRLLREIQSVLPDNQTPRAEDVRNMPY 376
Query: 1183 LKASIKETLRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQVAVYAMGRDPAFFSNPGQFD 1362
LKA +KE++RL P R L VL +Y +P T++ + +G F + +F
Sbjct: 377 LKACLKESMRLTPSVPFTTRTLDKPTVLGEYTLPKGTVLTLNTQVLGSSEDNFEDADKFR 436
Query: 1363 PTRWLGKERDLIHFRNLGFGWGVRQCVGRRIAELEMTLFLIHILEDF 1503
P RWL KE+ + F +L FG G R C+GRR+AEL++ L L I++ +
Sbjct: 437 PERWLEKEKKINPFAHLPFGVGKRMCIGRRLAELQLHLALCWIIQKY 483
>ref|NP_077226.2| sterol 26-hydroxylase, mitochondrial [Mus musculus].
Length = 533
Score = 202 bits (513), Expect = 8e-52
Identities = 143/494 (28%), Positives = 231/494 (46%), Gaps = 11/494 (2%)
Frame = +1
Query: 58 MLARGLALRSVLVKGCQPFLSAPRECPGHPRVGTGEGACISTKTPRPFSEIPSPGDNGWI 237
++ RGL + K P +E P GTG+ PR S PG
Sbjct: 18 VVGRGLCPQGARAKATIPAALQAQESTEGP--GTGQDR------PRLRSPAELPGTGTLQ 69
Query: 238 NLYRFWKEKGTQKIHYHHVQNFQKYGPIYREKLGNLGSVYIIDPEDVALLFKFEGPNPER 417
L++ + + + V N KYGP++ G +V + + + + EG P R
Sbjct: 70 FLFQLFLQGYVLHLPDLQVLNKTKYGPMWTTSFGTYTNVNLASAPLLEQVMRQEGKYPIR 129
Query: 418 YNIPPWVAYHQHYQKPVGVLLKKSGAWKKDRLVLNTEVMAPEAIKNFIPLLDTVSQDFVG 597
++ W + H G+ + + W R L ++ P+ + L+ V DF+
Sbjct: 130 DHMDQWKDHRDHKGLTYGIFIAQGEQWYHLRQALKQRLLKPDEAALYTDALNEVISDFIT 189
Query: 598 VLHRRIKQQGSGKFSGDIREDLFRFAFESITNVIFGERLGMLEEIVDPEAQKFIDAVYQM 777
L + + SG D+ L+ A E+IT ++F +R+G L+ + + FI +V M
Sbjct: 190 RLDQVRAESESGDQVPDMAHLLYHLALEAITYILFEKRIGCLKPSIPEDTAAFIRSVAIM 249
Query: 778 FHTSVPMLNLPPDLFRLFRTKTWRDHVAAWDTIFNKAEKYTQNFYWDLRRKREFNNYPGI 957
F SV + LP L W+ ++ WD IF+ +K +L+ + + G+
Sbjct: 250 FQNSVYITFLPKWTRPLL--PFWKRYLNGWDNIFSFGKKLIDEKVQELKAQLQETGPDGV 307
Query: 958 -----LYRLLGNDKLLSEDVKANVTEMLAGGVDTTSMTLQWHLYEMARSLNVQEMLREEV 1122
L+ LL N+ L +++ E+L GVDTTS TL W LY +++S +QE L +EV
Sbjct: 308 RVSGYLHFLLTNELLSTQETIGTFPELLLAGVDTTSNTLTWALYHLSKSPEIQEALHKEV 367
Query: 1123 LNARRQAQGDTSKMLQLVPLLKASIKETLRLHPISVTLQRYLV-NDLVLRDYMIPAKTLV 1299
+ K +PLLKA IKETLRL+P+ T R + + + ++ P T
Sbjct: 368 TGVVPFGKVPQHKDFAHMPLLKAVIKETLRLYPVVPTNSRIITEKETEINGFLFPKNTQF 427
Query: 1300 QVAVYAMGRDPAFFSNPGQFDPTRWLGKER----DLIH-FRNLGFGWGVRQCVGRRIAEL 1464
+ Y + RDP+ F P F P RWL K+ ++H F ++ FG+GVR C+GRRIAEL
Sbjct: 428 VLCHYVVSRDPSVFPEPNSFQPHRWLRKKEADNPGILHPFGSVPFGYGVRSCLGRRIAEL 487
Query: 1465 EMTLFLIHILEDFQ 1506
EM L L +++ ++
Sbjct: 488 EMQLMLSRLVQKYE 501
>ref|NP_031845.1| cytochrome P450 3A13 [Mus musculus].
Length = 503
Score = 108 bits (271), Expect = 9e-24
Identities = 94/364 (25%), Positives = 171/364 (46%), Gaps = 17/364 (4%)
Frame = +1
Query: 463 PVGVLLK-----KSGAWKKDRLVLNTEVMAPEAIKNFIPLLDTVSQDFVGVLHRRIKQQG 627
PVG+L K ++ WK+ R +L+ + +K P+++ F VL R ++Q G
Sbjct: 110 PVGILKKAISISENEEWKRIRALLSPTFTSGR-LKEMFPIIN----QFTDVLVRNMRQ-G 163
Query: 628 SGKFSGDIREDLF-RFAFESITNVIFGERLGMLEEIVDPEAQKFIDA----VYQMFHTSV 792
G+ +D+F ++ + IT FG + L DP +K ++ SV
Sbjct: 164 LGEGKPTSMKDIFGAYSMDVITATSFGVNIDSLNNPQDPFVEKIKKLLKFDIFDPLFLSV 223
Query: 793 PMLNLPPDLFRLFRTKTWRDHVAAWDTIFNKAEKYTQNFYWDLRRKREFNNYPGIL---- 960
+ +F + V ++ T E+ +N + ++R ++ ++
Sbjct: 224 TLFPFLTPVFDALNVSLFPRDVISFFT--TSVERMKENRMKEKEKQRV--DFLQLMINSQ 279
Query: 961 -YRLLGNDKLLSE-DVKANVTEMLAGGVDTTSMTLQWHLYEMARSLNVQEMLREEVLNAR 1134
Y+ + K LS+ ++ A + G +TTS L + LY +A +VQ+ L++E+ A
Sbjct: 280 NYKTKESHKALSDVEIVAQSVIFIFAGYETTSSALSFALYLLAIHPDVQKKLQDEIDAAL 339
Query: 1135 RQAQGDTSKMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQVAVY 1314
T L + L + ETLRL+PI+ L+R D+ + IP T+V + +
Sbjct: 340 PNKAPATYDTLLQMEYLDMVVNETLRLYPIAGRLERVCKTDVEINGLFIPKGTVVMIPTF 399
Query: 1315 AMGRDPAFFSNPGQFDPTRWLGKERDLIH-FRNLGFGWGVRQCVGRRIAELEMTLFLIHI 1491
A+ +DP ++ P +F P R+ K +D I+ + L FG G R C+G R A + M + L+ +
Sbjct: 400 ALHKDPKYWPEPEEFRPERFSKKNQDSINPYMYLPFGSGPRNCIGMRFALINMKVALVRV 459
Query: 1492 LEDF 1503
L++F
Sbjct: 460 LQNF 463
>ref|NP_031844.1| cytochrome P450 3A11 [Mus musculus].
Length = 504
Score = 99.8 bits (247), Expect = 5e-21
Identities = 91/374 (24%), Positives = 166/374 (44%), Gaps = 27/374 (7%)
Frame = +1
Query: 463 PVGVLLK-----KSGAWKKDRLVLNTEVMAPEAIKNFIPLLDTVSQDFVGVLHRRIKQQG 627
PVG++ K K WK+ R +L+ + + +K P+++ V L ++ K+
Sbjct: 110 PVGIMSKAISISKDDEWKRYRALLSPTFTSGK-LKEMFPVIEQYGDILVKYLRQKAKK-- 166
Query: 628 SGKFSGDIREDLFRFAFESITNVIFGERLGMLEEIVDPEAQK------------------ 753
GK +++ L ++ + IT+ FG + L DP +K
Sbjct: 167 -GK-PVTMKDVLGAYSMDVITSTSFGVNVDSLNNPEDPFVEKAKKLLRFDFFDPLLFSVV 224
Query: 754 ---FIDAVYQMFHTSVPMLNLPPDLFRLFRTKTWRDHVAAWDTIFNKAEKYTQNFYWDLR 924
F+ VY+M + + P D F+ R + D+ +K+ +F L
Sbjct: 225 LFPFLTPVYEMLNICM----FPKDSIEFFKKFVDRMKESRLDS----KQKHRVDFL-QLM 275
Query: 925 RKREFNNYPGILYRLLGNDKLLSEDVKANVTEMLAGGVDTTSMTLQWHLYEMARSLNVQE 1104
N+ + ++ L + ++ ++ + + G +TTS TL + L+ +A ++Q+
Sbjct: 276 MNSHNNSKDKVSHKALSDMEITAQSII-----FIFAGYETTSSTLSFTLHSLATHPDIQK 330
Query: 1105 MLREEVLNARRQAQGDTSKMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDYMIP 1284
L++E+ A T + + L + ETLRL+PI+ L+R D+ L IP
Sbjct: 331 KLQDEIDEALPNKAPPTYDTVMEMEYLDMVLNETLRLYPIANRLERVCKKDVELNGVYIP 390
Query: 1285 AKTLVQVAVYAMGRDPAFFSNPGQFDPTRWLGKERDLIH-FRNLGFGWGVRQCVGRRIAE 1461
+ V + YA+ DP +S P +F P R+ + + I + L FG G R C+G R A
Sbjct: 391 KGSTVMIPSYALHHDPQHWSEPEEFQPERFSKENKGSIDPYVYLPFGNGPRNCLGMRFAL 450
Query: 1462 LEMTLFLIHILEDF 1503
+ M L L I+++F
Sbjct: 451 MNMKLALTKIMQNF 464
>ref|NP_796354.1| cytochrome P450, family 3, subfamily a, polypeptide 44 [Mus
musculus].
Length = 504
Score = 98.6 bits (244), Expect = 1e-20
Identities = 89/370 (24%), Positives = 165/370 (44%), Gaps = 23/370 (6%)
Frame = +1
Query: 463 PVGVLLK-----KSGAWKKDRLVLNTEVMAPEAIKNFIPLLDTVSQDFVGVLHRRIKQQG 627
PVG++ K K WK+ R +L+ + +K P+++ + +L + ++Q+
Sbjct: 110 PVGIMSKAISISKDEEWKRYRALLSPTFTSGR-LKEMFPVIE----QYGDILVKYLRQEA 164
Query: 628 SGKFSGDIREDLFRFAFESITNVIFGERLGMLEEIVDP---EAQKFIDA----------- 765
+++ L ++ + IT+ FG + L DP EA+KF+
Sbjct: 165 EKGMPVAMKDVLGAYSMDVITSTSFGVNVDSLNNPEDPFVEEAKKFLRVDFFDPLLFSVV 224
Query: 766 VYQMFHTSVPMLNL---PPDLFRLFRTKTWRDHVAAWDTIFNKAEKYTQNFYWDLRRKRE 936
++ + MLN+ P D F+ R + D+ +K+ +F L
Sbjct: 225 LFPLLTPVYEMLNICMFPNDSIEFFKKFVDRMQESRLDS----NQKHRVDFL-QLMMNSH 279
Query: 937 FNNYPGILYRLLGNDKLLSEDVKANVTEMLAGGVDTTSMTLQWHLYEMARSLNVQEMLRE 1116
N+ ++ N ++ + + ++ G +TTS TL + LY +A ++Q+ L+
Sbjct: 280 NNSKDKDSHKAFSNMEITVQSII-----FISAGYETTSSTLSFTLYCLATHPDIQKKLQA 334
Query: 1117 EVLNARRQAQGDTSKMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDYMIPAKTL 1296
E+ A T + + L + ETLRL+PI L+R D+ L IP ++
Sbjct: 335 EIDKALPNKATPTCDTVMEMEYLDMVLNETLRLYPIVTRLERVCKKDVELNGVYIPKGSM 394
Query: 1297 VQVAVYAMGRDPAFFSNPGQFDPTRWLGKERDLIH-FRNLGFGWGVRQCVGRRIAELEMT 1473
V + YA+ DP + +P +F P R+ + + I + L FG G R C+G R A + M
Sbjct: 395 VMIPSYALHHDPQHWPDPEEFQPERFSKENKGSIDPYVYLPFGIGPRNCIGMRFALMNMK 454
Query: 1474 LFLIHILEDF 1503
L + +L++F
Sbjct: 455 LAVTKVLQNF 464
>ref|NP_062766.2| cytochrome P450 3A25 [Mus musculus].
Length = 503
Score = 97.8 bits (242), Expect = 2e-20
Identities = 96/421 (22%), Positives = 196/421 (46%), Gaps = 20/421 (4%)
Frame = +1
Query: 301 FQKYGPIYREKLGNLGSVYIIDPEDVALLFKFEGPNPERYNIPPWVAYHQHYQKPVGVLL 480
++KYG I+ G + I+DPE + ++ E Y+ V ++ + PVG +
Sbjct: 65 YKKYGKIWGFYEGPQPILAIMDPEIIKIVLV-----KECYS----VFTNRRFFGPVGFMK 115
Query: 481 K-----KSGAWKKDRLVLNTEVMAPEAIKNFIPLLDTVSQDFVGVLHRRIKQQGSGKFSG 645
K + WK+ R +L+ + + +K P++ + + +L R ++++
Sbjct: 116 KAITISEDEEWKRLRTLLSPTFTSGK-LKEMFPIM----RQYGDILVRNLRREEEKGEPI 170
Query: 646 DIREDLFRFAFESITNVIFGERLGMLEEIVDPEAQKFIDAV-YQMFHTSVPMLNLPPDLF 822
+++ ++ + IT FG + L DP QK + +++F + + L P L
Sbjct: 171 SMKDIFGAYSMDVITGTSFGVNVDSLNNPQDPFVQKAKKILKFKIFDPFLLSIILFPFLT 230
Query: 823 RLFRTKTWRDHVAAWDTIFNK-AEKYTQNFYWDLRRKREFNNYPGIL--YRLLGN----- 978
++ + +IF + + + + F ++++R +N + +L+ N
Sbjct: 231 PIYEMLNF--------SIFPRDSMNFFKKFVKRMKKERLASNQKNRVDFLQLMMNTQNSK 282
Query: 979 ----DKLLSE-DVKANVTEMLAGGVDTTSMTLQWHLYEMARSLNVQEMLREEVLNARRQA 1143
K LS+ ++ A + GG D TS ++ +YE+A +VQ+ L++E+
Sbjct: 283 GQESQKALSDLEMAAQAVIFIFGGYDATSTSISLIMYELATHPDVQKKLQDEIDRTLPNK 342
Query: 1144 QGDTSKMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQVAVYAMG 1323
T L + L + E+LRL+PI++ L+R D+ + IP T+V + +Y +
Sbjct: 343 APVTYDALMDMEYLDMVVNESLRLYPIAIRLERVSKKDVEINGVFIPKGTVVMIPIYPLH 402
Query: 1324 RDPAFFSNPGQFDPTRWLGKERDLIH-FRNLGFGWGVRQCVGRRIAELEMTLFLIHILED 1500
R+P ++ P +F P R+ + + I + + FG G R C+G R A + + L +I +L++
Sbjct: 403 RNPEYWPEPQEFCPERFSKENKGNIDPYIYMPFGNGPRNCIGMRFALISIKLAVIGVLQN 462
Query: 1501 F 1503
F
Sbjct: 463 F 463
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 57,249,381
Number of extensions: 1666604
Number of successful extensions: 6065
Number of sequences better than 1.0e-05: 102
Number of HSP's gapped: 5932
Number of HSP's successfully gapped: 102
Length of query: 528
Length of database: 15,617,559
Length adjustment: 106
Effective length of query: 422
Effective length of database: 12,433,743
Effective search space: 5247039546
Effective search space used: 5247039546
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-006991
(1586 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_999592.1| cholesterol side-chain cleavage enzyme, mitocho... 1007 0.0
Alignment gi|NP_999160.1| 25-hydroxyvitamin D-1 alpha hydroxylase, mitoch... 237 2e-62
Alignment gi|NP_999240.2| 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mito... 218 1e-56
Alignment gi|NP_001230233.1| sterol 26-hydroxylase, mitochondrial precurs... 189 5e-48
Alignment gi|NP_999588.1| cytochrome P450 3A29 [Sus scrofa]. 101 1e-21
Alignment gi|NP_999587.1| cytochrome P450 3A39 [Sus scrofa]. 94 3e-19
Alignment gi|NP_001128296.1| cytochrome P450 3A46 [Sus scrofa]. 94 3e-19
Alignment gi|NP_001182438.1| cytochrome P450, subfamily IIIA, polypeptide... 92 6e-19
Alignment gi|NP_999211.1| thromboxane-A synthase [Sus scrofa]. 92 8e-19
Alignment gi|XP_003128078.2| PREDICTED: cytochrome P450 4A24-like [Sus sc... 89 7e-18
>ref|NP_999592.1| cholesterol side-chain cleavage enzyme, mitochondrial precursor [Sus
scrofa].
Length = 520
Score = 1007 bits (2604), Expect(2) = 0.0
Identities = 491/497 (98%), Positives = 493/497 (99%)
Frame = +1
Query: 58 MLARGLALRSVLVKGCQPFLSAPRECPGHPRVGTGEGACISTKTPRPFSEIPSPGDNGWI 237
MLARGLALRSVLVKGCQPFLSAPRECPGHPRVGTGEGACISTKTPRPFSEIPSPGDNGWI
Sbjct: 1 MLARGLALRSVLVKGCQPFLSAPRECPGHPRVGTGEGACISTKTPRPFSEIPSPGDNGWI 60
Query: 238 NLYRFWKEKGTQKIHYHHVQNFQKYGPIYREKLGNLGSVYIIDPEDVALLFKFEGPNPER 417
NLYRFWKEKGTQKIHYHHVQNFQKYGPIYREKLGNL SVYIIDPEDVALLFKFEGPNPER
Sbjct: 61 NLYRFWKEKGTQKIHYHHVQNFQKYGPIYREKLGNLESVYIIDPEDVALLFKFEGPNPER 120
Query: 418 YNIPPWVAYHQHYQKPVGVLLKKSGAWKKDRLVLNTEVMAPEAIKNFIPLLDTVSQDFVG 597
YNIPPWVAYHQHYQKPVGVLLKKSGAWKKDRLVLNTEVMAPEAIKNFIPLLDTVSQDFVG
Sbjct: 121 YNIPPWVAYHQHYQKPVGVLLKKSGAWKKDRLVLNTEVMAPEAIKNFIPLLDTVSQDFVG 180
Query: 598 VLHRRIKQQGSGKFSGDIREDLFRFAFESITNVIFGERLGMLEEIVDPEAQKFIDAVYQM 777
VLHRRIKQQGSGKFSGDIREDLFRFAFESITNVIFGERLGMLEEIVDPEAQKFIDAVYQM
Sbjct: 181 VLHRRIKQQGSGKFSGDIREDLFRFAFESITNVIFGERLGMLEEIVDPEAQKFIDAVYQM 240
Query: 778 FHTSVPMLNLPPDLFRLFRTKTWRDHVAAWDTIFNKAEKYTQNFYWDLRRKREFNNYPGI 957
FHTSVPMLNLPPDLFRLFRTKTWRDHVAAWDTIFNKAEKYTQNFYWDLRRKREFNNYPGI
Sbjct: 241 FHTSVPMLNLPPDLFRLFRTKTWRDHVAAWDTIFNKAEKYTQNFYWDLRRKREFNNYPGI 300
Query: 958 LYRLLGNDKLLSEDVKANVTEMLAGGVDTTSMTLQWHLYEMARSLNVQEMLREEVLNARR 1137
LYRLLGNDKLLSEDVKANVTEMLAGGVDTTSMTLQWHLYEMARSLNVQEMLREEVLNARR
Sbjct: 301 LYRLLGNDKLLSEDVKANVTEMLAGGVDTTSMTLQWHLYEMARSLNVQEMLREEVLNARR 360
Query: 1138 QAQGDTSKMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQVAVYA 1317
QAQGDTSKMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQVAVYA
Sbjct: 361 QAQGDTSKMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQVAVYA 420
Query: 1318 MGRDPAFFSNPGQFDPTRWLGKERDLIHFRNLGFGWGVRQCVGRRIAELEMTLFLIHILE 1497
MGRDPAFFSNPGQFDPTRWLGKERDLIHFRNLGFGWGVRQCVGRRIAELEMTLFLIHILE
Sbjct: 421 MGRDPAFFSNPGQFDPTRWLGKERDLIHFRNLGFGWGVRQCVGRRIAELEMTLFLIHILE 480
Query: 1498 DFQGELQHFXDVDTISN 1548
+F+ ELQHF DVDTI N
Sbjct: 481 NFKVELQHFSDVDTIFN 497
Score = 28.9 bits (63), Expect(2) = 0.0
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +3
Query: 1548 LILMPDRPIFLVF 1586
LILMPD+PIFLVF
Sbjct: 498 LILMPDKPIFLVF 510
>ref|NP_999160.1| 25-hydroxyvitamin D-1 alpha hydroxylase, mitochondrial [Sus scrofa].
Length = 504
Score = 237 bits (604), Expect = 2e-62
Identities = 150/455 (32%), Positives = 230/455 (50%), Gaps = 12/455 (2%)
Frame = +1
Query: 178 STKTPRPFSEIPSPGDNGWINLYRFWKEKGTQKIHYHHVQNFQKYGPIYREKLGNLGSVY 357
S PR +++P P G+ L + + G ++H VQ ++GP++ G + +VY
Sbjct: 26 SDSAPRGLADLPGPSTPGF--LAELFCKGGLSRLHELQVQGAARFGPVWLASFGKVRTVY 83
Query: 358 IIDPEDVALLFKFEGPNPERYNIPPWVAYHQHYQKPVGVLLKKSGAWKKDRLVLNTEVMA 537
+ P V L + EGP PER + PW + + Q+ G+L + W++ R +L ++
Sbjct: 84 VAAPTLVEQLLRQEGPLPERCSFSPWTEHRRRRQRSCGLLTAEGEEWQRLRSLLAPLLLR 143
Query: 538 PEAIKNFIPLLDTVSQDFVGVLHRRIKQQ-----GSGKFSGDIREDLFRFAFESITNVIF 702
P+A + L V QD V RR++ Q G D+ + ++F E I V+
Sbjct: 144 PQAAARYAGTLHDVVQDLV----RRLRSQRGLGAGPPALVRDVAGEFYKFGLEGIAAVLL 199
Query: 703 GERLGMLEEIVDPEAQKFIDAVYQMFHTSVPMLNLPPDLFRLFRTKTWRDHVAAWDTIFN 882
G RLG LE V P+ + FI AV +F +++ + +P L RL W WD +F
Sbjct: 200 GSRLGCLEPEVPPDTETFIRAVGSVFVSTLLTMAMPSWLHRLV-PGPWARLCRDWDQMFA 258
Query: 883 KAEKYTQNFYWDLRRKREFNNYPGI-----LYRLLGNDKLLSEDVKANVTEMLAGGVDTT 1047
A+++ + + K + + L L ++L + + NVTE+L GVDT
Sbjct: 259 FAQEHVERREAEAAMKSQGKPEEDLGSGAHLTYFLFREELPAPSILGNVTELLLAGVDTV 318
Query: 1048 SMTLQWHLYEMARSLNVQEMLREEVLNARRQAQG--DTSKMLQLVPLLKASIKETLRLHP 1221
S TL W LYE++R VQ L E+ A + ++ +L +PLLKA +KE LRL+P
Sbjct: 319 SNTLSWALYELSRHPEVQMALHSEIKTALGPSSSAHPSATVLSQLPLLKAVVKEVLRLYP 378
Query: 1222 ISVTLQRYLVNDLVLRDYMIPAKTLVQVAVYAMGRDPAFFSNPGQFDPTRWLGKERDLIH 1401
+ R D+ + DY+IP TLV + YA RDPA F P F P RWLG+
Sbjct: 379 VVPGNSRVPDKDICVGDYIIPKNTLVTLCHYATSRDPAQFPEPNSFRPARWLGECPAPHP 438
Query: 1402 FRNLGFGWGVRQCVGRRIAELEMTLFLIHILEDFQ 1506
F +L FG+G R C+GRR+AELE+ + L IL F+
Sbjct: 439 FASLPFGFGKRSCMGRRLAELELQMALAQILIHFE 473
>ref|NP_999240.2| 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial [Sus
scrofa].
Length = 514
Score = 218 bits (554), Expect = 1e-56
Identities = 127/419 (30%), Positives = 226/419 (53%), Gaps = 2/419 (0%)
Frame = +1
Query: 253 WKEKGTQKIHYHHVQNFQKYGPIYREKLGNLGSVYIIDPEDVALLFKFEGPNPERYNIPP 432
WK G +K H + +KYG I+R KLG+ SV++ P + L++ E +P+R I P
Sbjct: 75 WKG-GLKKQHDTLAEYHRKYGKIFRMKLGSFDSVHLGSPCLLEALYRTESAHPQRLEIKP 133
Query: 433 WVAYHQHYQKPVGVLLKKSGAWKKDRLVLNTEVMAPEAIKNFIPLLDTVSQDFVGVLHRR 612
W AY + ++ G+L+ + W++ R ++M P + ++ V DF+ +
Sbjct: 134 WKAYRDYREEGYGLLILEGEDWQRVRSAFQKKLMKPMEVMKLDNKINEVLADFMSRIDEL 193
Query: 613 IKQQGSGKFSGDIREDLFRFAFESITNVIFGERLGMLEEIVDPEAQKFIDAVYQMFHTSV 792
++G + D+ +L +++FESI V++ +R G+L++ EA FI A+ M T
Sbjct: 194 CDERGCIE---DLYSELNKWSFESICLVLYEKRFGLLQKDAGEEALNFITAIKTMMSTFG 250
Query: 793 PMLNLPPDLFRLFRTKTWRDHVAAWDTIFNKAEKYTQNFYWDLRRKREFNNYPG--ILYR 966
M+ P +L + TK W+ H AWDTIF + + R ++ P L
Sbjct: 251 KMMVTPVELHKNLNTKVWQAHTLAWDTIFKSVKSCIDH------RLEKYAEQPSADFLCD 304
Query: 967 LLGNDKLLSEDVKANVTEMLAGGVDTTSMTLQWHLYEMARSLNVQEMLREEVLNARRQAQ 1146
+ +++L +++ A+VTE+ ++TT+ +L W LY ++R+ +VQ+ L +E+ + + Q
Sbjct: 305 IYHHNQLSKKELYASVTELQLAAIETTANSLMWILYNLSRNPHVQQKLLKEIQSVLPENQ 364
Query: 1147 GDTSKMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQVAVYAMGR 1326
++ L+ +P LKA +KE++RL P R L +VL +Y +P T++ + Y +G
Sbjct: 365 MPRAEDLRNMPYLKACLKESMRLTPSVPFTTRTLDKAMVLGEYALPKGTVLMLNTYVLGT 424
Query: 1327 DPAFFSNPGQFDPTRWLGKERDLIHFRNLGFGWGVRQCVGRRIAELEMTLFLIHILEDF 1503
+ F + QF P RWL +++ + F +L FG G R C+GRR+AEL++ L L I+ +
Sbjct: 425 NEENFEDSSQFRPERWLQEKKKINPFAHLPFGVGKRMCIGRRLAELQLHLALCWIIRKY 483
>ref|NP_001230233.1| sterol 26-hydroxylase, mitochondrial precursor [Sus scrofa].
Length = 537
Score = 189 bits (479), Expect = 5e-48
Identities = 132/462 (28%), Positives = 221/462 (47%), Gaps = 11/462 (2%)
Frame = +1
Query: 154 GTGEGACISTKTPRPFSEIPSPGDNGWINLYRFWKEKGTQKIHYHHVQNFQKYGPIYREK 333
GTG G + R E+ PG L++ + +H V N KYGP++
Sbjct: 51 GTGPG----DRRLRSLKELSGPGRLRL--LFQLLAQGYVLHLHQLQVLNKAKYGPMWINY 104
Query: 334 LGNLGSVYIIDPEDVALLFKFEGPNPERYNIPPWVAYHQHYQKPVGVLLKKSGAWKKDRL 513
+G V + + + + EG P R ++ W + G + +W + R
Sbjct: 105 IGPQIHVNVASAPLLEQVMRQEGKYPVRNDMDLWKEHRDLQGLTYGPFTTEGESWYRLRQ 164
Query: 514 VLNTEVMAPEAIKNFIPLLDTVSQDFVGVLHRRIKQQGSGKFSGDIREDLFRFAFESITN 693
LN ++ P + L+ V DF+ L++ + G DI + FA E+I
Sbjct: 165 ALNQRMLKPADAALYTNALNEVVDDFMVRLNQLRAESTLGDHVPDIAHQFYFFALEAICY 224
Query: 694 VIFGERLGMLEEIVDPEAQKFIDAVYQMFHTSVPMLNLPPDLFRLFRTKTWRDHVAAWDT 873
++F +R+G LE + + + F+ +V MF S+ LP L WR ++ W+T
Sbjct: 225 ILFEKRIGCLERSIPQDTKAFVRSVGFMFQNSLYATFLPKWTRPLL--PYWRRYLDGWNT 282
Query: 874 IFNKAEKYTQNFYWDLRRKREFNN-----YPGILYRLLGNDKLLSEDVKANVTEMLAGGV 1038
IF+ +K ++ + + G L+ LL + +L + + ++ E+L GV
Sbjct: 283 IFSFGKKLIDQKLEEIEAQLQAGGPEEPRISGYLHFLLTSGQLSPREAEGSLPELLMAGV 342
Query: 1039 DTTSMTLQWHLYEMARSLNVQEMLREEVLNARRQAQGDTSKMLQLVPLLKASIKETLRLH 1218
DTTS TL W LY ++++ +Q L EEV+ + K L +PLLKA +KETLRL+
Sbjct: 343 DTTSNTLTWALYHLSKNPEIQAALHEEVVGMVPAGRVPQYKDLAHMPLLKAVLKETLRLY 402
Query: 1219 PISVTLQRYLVN-DLVLRDYMIPAKTLVQVAVYAMGRDPAFFSNPGQFDPTRWLGK-ERD 1392
P+ R + + ++ + ++ P T + Y + RDP+ F P +F P RWL K + D
Sbjct: 403 PVVPVNSRVITDKEIEVGGFLFPKNTQFVLCHYVVSRDPSIFPEPDRFQPQRWLRKNQTD 462
Query: 1393 LIH----FRNLGFGWGVRQCVGRRIAELEMTLFLIHILEDFQ 1506
+ F ++ FG+GVR C+GRRIAELEM L L +++ ++
Sbjct: 463 ALKGQHPFGSVPFGYGVRGCLGRRIAELEMQLLLTRLIQQYE 504
>ref|NP_999588.1| cytochrome P450 3A29 [Sus scrofa].
Length = 503
Score = 101 bits (251), Expect = 1e-21
Identities = 104/420 (24%), Positives = 182/420 (43%), Gaps = 19/420 (4%)
Frame = +1
Query: 301 FQKYGPIYREKLGNLGSVYIIDPEDV-ALLFKFEGPNPERYNIPPWVAYHQHYQKPVGVL 477
FQ+YG ++ G + + DP + ++L K E Y+ V ++ P+G +
Sbjct: 65 FQQYGKMWGVYDGRQPLLAVTDPNMIKSVLVK------ECYS----VFTNRRSFGPLGAM 114
Query: 478 -----LKKSGAWKKDRLVLNTEVMAPEAIKNFIPLLDTVSQDFVGVLHRRIKQQGSGKFS 642
L + WK+ R +L+ + + +K P++ V L + + K
Sbjct: 115 RNALSLAEDEEWKRIRTLLSPTFTSGK-LKEMFPIISHYGDLLVSNLRKEAE-----KGK 168
Query: 643 GDIREDLF-RFAFESITNVIFGERLGMLEEIVDPEAQKFIDAV-YQMFHTSVPMLNLPPD 816
+D+F ++ + IT+ FG + L DP + + + F + L P
Sbjct: 169 PVTMKDIFGAYSMDVITSTAFGVNIDSLNNPQDPFVENSKKLLKFSFFDPFLLSLIFFPF 228
Query: 817 LFRLFRTKTWRDHVAAWDTIFNKAEKYTQNFYWDLRRKREFNNYPGILYRLLGNDK---- 984
L +F + F K+ K + ++KR + L +L+ N +
Sbjct: 229 LTPIFEVLNITLFPKSSVNFFTKSVKRMKESRLTDQQKRRVD-----LLQLMINSQNSKE 283
Query: 985 ------LLSEDVKANVTEMLAGGVDTTSMTLQWHLYEMARSLNVQEMLREEVLNARRQAQ 1146
L +E++ A + G +TTS L YE+A +VQ+ L+EE+
Sbjct: 284 MDPHKSLSNEELVAQGIIFIFAGYETTSSALSLLAYELATHPDVQQKLQEEIEATFPNKA 343
Query: 1147 GDTSKMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQVAVYAMGR 1326
T L + L + ETLRL+PI+ L+R D+ + +P T+V V V+ + R
Sbjct: 344 PPTYDALAQMEYLDMVVNETLRLYPIAARLERACKKDVEIHGVFVPKGTVVVVPVFVLHR 403
Query: 1327 DPAFFSNPGQFDPTRWLGKERDLIH-FRNLGFGWGVRQCVGRRIAELEMTLFLIHILEDF 1503
DP + P +F P R+ K +D I+ + L FG G R C+G R A + M L L+ +L++F
Sbjct: 404 DPDLWPEPEEFRPERFSKKHKDTINPYTYLPFGTGPRNCIGMRFALMNMKLALVRVLQNF 463
>ref|NP_999587.1| cytochrome P450 3A39 [Sus scrofa].
Length = 503
Score = 93.6 bits (231), Expect = 3e-19
Identities = 55/174 (31%), Positives = 92/174 (52%), Gaps = 1/174 (0%)
Frame = +1
Query: 985 LLSEDVKANVTEMLAGGVDTTSMTLQWHLYEMARSLNVQEMLREEVLNARRQAQGDTSKM 1164
L E++ A + G +TTS +L +YE+A +VQ+ L+EE+ +
Sbjct: 290 LSDEELVAQGVFFIFAGYETTSSSLSLLVYELATHPDVQQKLQEEIDATFPSKALPSYDA 349
Query: 1165 LQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQVAVYAMGRDPAFFS 1344
L + L + E LRL+PI+ L+R D+ + +P T++ V V+++ RDP +
Sbjct: 350 LAQMEYLDMVVNEILRLYPIAARLERVCKKDVEIHGVSVPKGTVMMVPVFSIHRDPELWP 409
Query: 1345 NPGQFDPTRWLGKERDLIH-FRNLGFGWGVRQCVGRRIAELEMTLFLIHILEDF 1503
P +F P R+ K +D I+ + L FG G R C+G R A + M L L+ +L++F
Sbjct: 410 EPEEFRPERFSKKNKDSINPYTYLPFGTGPRNCIGMRFALMNMKLALVRVLQNF 463
>ref|NP_001128296.1| cytochrome P450 3A46 [Sus scrofa].
Length = 503
Score = 93.6 bits (231), Expect = 3e-19
Identities = 100/426 (23%), Positives = 181/426 (42%), Gaps = 25/426 (5%)
Frame = +1
Query: 301 FQKYGPIYREKLGNLGSVYIIDPEDVALLFKFEGPN--PERYNIPPWVAYHQHYQKPVGV 474
FQ+YG ++ G + I DP+ + + E + R + P A V
Sbjct: 65 FQQYGKMWGFFDGRQPVLAITDPDMIKTVLVKECYSVFTNRRSFGPRGAMRS------AV 118
Query: 475 LLKKSGAWKKDRLVLNTEVMAPEAIKNFIPLLDTVSQDFVGVLHRRIKQQGSGKFSGDIR 654
L + WK+ R +L+ + + +K P++ V L + + K
Sbjct: 119 SLAEDEEWKRIRTLLSPTFTSGK-LKEMFPIISHYGDLLVSNLRKEAE-----KGKPVTM 172
Query: 655 EDLF-RFAFESITNVIFGERLGMLEEIVDPEAQK-------------FIDAVYQMFHTSV 792
+D+F ++ + IT+ FG + L DP + F+ ++ F T +
Sbjct: 173 KDIFGAYSMDVITSTAFGVNVDSLNNPQDPFVENSRKLLKFSFFSPFFLSIIFFPFLTPI 232
Query: 793 -PMLNLPPDLFRLFRTKTWRDHVAAWDTIFNKAEKYTQNFYWDL-------RRKREFNNY 948
+LN+ LF + + K TQ DL + +E + +
Sbjct: 233 LEVLNIT-----LFPKSVVNFFTRSIKRMKESRLKDTQKHRVDLLQLMINSQNSKEMDAH 287
Query: 949 PGILYRLLGNDKLLSEDVKANVTEMLAGGVDTTSMTLQWHLYEMARSLNVQEMLREEVLN 1128
G L N++L+++ V + G +TTS +L +YE+A +VQ+ L+EE+
Sbjct: 288 KG-----LSNEELVAQGVI-----FIFAGYETTSSSLSLLVYELATHPDVQQKLQEEIDA 337
Query: 1129 ARRQAQGDTSKMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQVA 1308
T L + L + E+LR+ P++ L+R D+ + +P T++ V
Sbjct: 338 TFPNKAPPTYDGLAQMEYLDMVVNESLRIFPVTPRLERSCKKDVEIHGVFVPKGTVMMVP 397
Query: 1309 VYAMGRDPAFFSNPGQFDPTRWLGKERDLIH-FRNLGFGWGVRQCVGRRIAELEMTLFLI 1485
++A+ R P + P +F P R+ K +D I+ + L FG G R C+G R A + M L L+
Sbjct: 398 IFALHRAPELWPEPEEFRPERFSKKNKDTINPYTYLPFGTGPRNCIGMRFALMNMKLALV 457
Query: 1486 HILEDF 1503
+L++F
Sbjct: 458 RVLQNF 463
>ref|NP_001182438.1| cytochrome P450, subfamily IIIA, polypeptide 22 [Sus scrofa].
Length = 503
Score = 92.4 bits (228), Expect = 6e-19
Identities = 99/423 (23%), Positives = 185/423 (43%), Gaps = 22/423 (5%)
Frame = +1
Query: 301 FQKYGPIYREKLGNLGSVYIIDPEDV-ALLFKFEGPNPERYNIPPWVAYHQHYQKPVGVL 477
F+KYG ++ G + + DPE + A+L K E Y+ ++ P GV+
Sbjct: 65 FKKYGKMWGFYDGRQPVLAMRDPEMIKAVLVK------ECYS----AFTNRRNFGPAGVM 114
Query: 478 -----LKKSGAWKKDRLVLNTEVMAPEAIKNFIPLLDTVSQDFVGVLHRRIKQQGSGKFS 642
+ K WK+ R +L+ + + +K P++ + +L R ++++ S
Sbjct: 115 KNAISVAKDEQWKRVRTLLSPTFTSGK-LKEMFPII----AQYGDMLVRNLRKEAEKGNS 169
Query: 643 GDIREDLFRFAFESITNVIFGERLGMLEEIVDPEAQ--------KFIDAVYQMFHTSVPM 798
+ +E ++ + IT+ FG + L DP Q F+D F S+ +
Sbjct: 170 INTKEIFGAYSMDVITSTAFGVDVDSLNNPRDPFVQYARKLLRFDFLDP----FILSIIL 225
Query: 799 LNLPPDLFRLFRTKTWRDHVAAWDTIFNKAEKYTQNFYWDLRRK-------REFNNYPGI 957
F + + + T K K ++ +RR N+
Sbjct: 226 FPFLSPFFEVLDITLFPRSSVKFFTQSVKRMKESRLKDQQMRRVDLLQLMINSQNSKETD 285
Query: 958 LYRLLGNDKLLSEDVKANVTEMLAGGVDTTSMTLQWHLYEMARSLNVQEMLREEVLNARR 1137
++ L + +L+++ + + G +TTS +L + Y +A +VQ+ L+EE+
Sbjct: 286 AHKALSDQELVAQSII-----FICAGYETTSSSLSFLAYILATHPDVQQNLQEEIDATFP 340
Query: 1138 QAQGDTSKMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQVAVYA 1317
+ L + L + E LRL+PI+ L+R D+ + +P T++ V V++
Sbjct: 341 SKALPSYDALAQMEYLDMVVNEILRLYPIAARLERVCKKDVEIHGVSVPKGTVMMVPVFS 400
Query: 1318 MGRDPAFFSNPGQFDPTRWLGKERDLIH-FRNLGFGWGVRQCVGRRIAELEMTLFLIHIL 1494
+ RDP + P +F P R+ K +D I+ + L FG G R C+G R A + M L L+ +L
Sbjct: 401 IHRDPELWPEPEEFRPERFSKKNKDSINPYTYLPFGTGPRNCIGMRFALMNMKLALVRVL 460
Query: 1495 EDF 1503
++F
Sbjct: 461 QNF 463
>ref|NP_999211.1| thromboxane-A synthase [Sus scrofa].
Length = 534
Score = 92.0 bits (227), Expect = 8e-19
Identities = 122/460 (26%), Positives = 195/460 (42%), Gaps = 52/460 (11%)
Frame = +1
Query: 289 HVQNFQKYGPIYREKLGNLGSVYIIDPEDV--ALLFKFEGPNPERYNIPPWVAYHQHYQK 462
H++ ++YGP+ LG V I DP+ + L KF N +A K
Sbjct: 67 HMELRKQYGPLSGYYLGRRMIVVISDPDMIKQVLAEKFS-------NFTNRMATGLE-SK 118
Query: 463 PVG--VLLKKSGAWKKDRLVLNTEVMAPEAIKNFIPLLDTVSQDFVGVLHRRIKQQGSGK 636
PV +L + W++ R VL T +P+ + PL+ + L R + SG
Sbjct: 119 PVADSILFLRDKRWEEVRSVL-TSAFSPKKLNKLTPLISQACDLLLAHLERYAE---SGD 174
Query: 637 FSGDIREDLFRFAFESITNVIFGERLGMLEEIVDPEAQKFIDAVYQMFHTSVPML----- 801
+ DI+ + + + +V FG ++ EE P F+ + F SVP L
Sbjct: 175 -AFDIQRCYCCYTTDVVASVAFGTQVNSSEEPEHP----FVKHCRRFFAFSVPRLILVLI 229
Query: 802 ----NLPPDLFRLFRTKTWRDHVAAWDTIFNK-------------AEKYTQNFYW---DL 921
++ L R+ K RD V + FNK AE+ Q+F DL
Sbjct: 230 LSFPSIMVPLARILPNKK-RDEVNGF---FNKLIRNVIALRDQQAAEERRQDFLQMVLDL 285
Query: 922 RR-------------KREFNNYPGI--------LYRLLGNDKLLSEDVKANVTEMLAGGV 1038
R ++ F++ G L R L L ++V L G
Sbjct: 286 RHSAPSVGVENFDIVRQAFSSAKGCPADPSQPHLPRPLSKP-LTVDEVVGQAFLFLIAGY 344
Query: 1039 DTTSMTLQWHLYEMARSLNVQEMLREEVLN-ARRQAQGDTSKMLQLVPLLKASIKETLRL 1215
+ + TL + Y +A + + QE L EV + +++ + + Q +P L + ETLR+
Sbjct: 345 EIITNTLSFVTYLLATNPDCQEKLLREVDDFSKKHPSPEHCSLQQGLPYLDMVLSETLRM 404
Query: 1216 HPISVTLQRYLVNDLVLRDYMIPAKTLVQVAVYAMGRDPAFFSNPGQFDPTRWLGKERDL 1395
+P + R D + IPA T+++VAV A+ DP + +P FDP R+ + + L
Sbjct: 405 YPPAFRFTREAARDCEVLGQRIPAGTVLEVAVGALHHDPKHWPHPETFDPERFTAEAQRL 464
Query: 1396 IH-FRNLGFGWGVRQCVGRRIAELEMTLFLIHILEDFQGE 1512
F L FG G R C+G ++ LE+ L L+HIL F+ E
Sbjct: 465 QQPFTYLPFGAGPRSCLGVQLGLLEIKLTLLHILRKFRFE 504
>ref|XP_003128078.2| PREDICTED: cytochrome P450 4A24-like [Sus scrofa].
Length = 504
Score = 89.0 bits (219), Expect = 7e-18
Identities = 103/454 (22%), Positives = 187/454 (41%), Gaps = 16/454 (3%)
Frame = +1
Query: 193 RPFSEIPSPGDNGWINLYRFWKEKGTQKIHYHHVQNFQKYGPIYREKLGNLGSVYIIDPE 372
+ + PSP + R ++E+G Q+ + + R + G V + DP+
Sbjct: 40 KALQQFPSPPSHWLYGHSREFQEEGEQQSLLKRIGKYPS--ACARWRWGTRALVLVYDPD 97
Query: 373 DVALLFKFEGP-NPERYNIP-PWVAYHQHYQKPVGVLLKKSGAWKKDRLVLNTEVMAPEA 546
+ ++ P N Y + PW+ G+LL W + R +L T +
Sbjct: 98 YMKVVLARSDPKNSVVYRLLIPWIG--------CGLLLLNGQTWFQRRRML-TPAFHYDI 148
Query: 547 IKNFIPLLDTVSQDFVGVLHRRIKQQGSGKFSGDIREDLFRFAFESITNVIFGERLGMLE 726
+K ++ L+ Q + + + Q + G + ++I F + G +
Sbjct: 149 LKPYVGLMAKSVQVMLDKWEQLVAQDPRLEIVGPVS----LMTLDTIMKCAFSHQ-GSTQ 203
Query: 727 EIVDPEAQKFIDAVYQM---FHTSVPMLNLPPDLFRLFRTKTWRDHVAA------WDTIF 879
D ++ +I A++ + F T L D+ + + H AA D +
Sbjct: 204 --TDGDSHSYIQAIWDLKNLFSTRTKSAFLQNDIIYRLSPEGRKSHRAARIAHQHTDRVI 261
Query: 880 N--KAEKYTQNFYWDLRRKREFNNYPGILYRLLGNDKLLSE-DVKANVTEMLAGGVDTTS 1050
KA+ Q ++R+KR + +L + LS+ D++A V + G DTT+
Sbjct: 262 QLRKAQLQKQGEMENVRKKRHLDFLDILLLAQMEKGNSLSDTDLRAEVDTFMFEGHDTTA 321
Query: 1051 MTLQWHLYEMARSLNVQEMLREEVLNARRQAQGDTSKMLQLVPLLKASIKETLRLHPISV 1230
+ W LY +A Q+ REE+ T L +P IKE LRL+P
Sbjct: 322 SGISWILYALASHPEHQQRCREEIQGLLGDGTSITWDHLDQMPYTTMCIKEALRLYPPVP 381
Query: 1231 TLQRYLVNDLVLRD-YMIPAKTLVQVAVYAMGRDPAFFSNPGQFDPTRWL-GKERDLIHF 1404
++ R L + D +PA ++ +++Y + +P + NP +FDP+R+ G R F
Sbjct: 382 SVGRELSKPITFPDGRSLPAGIILSLSIYGLHHNPQVWPNPEEFDPSRFAPGSARHSHAF 441
Query: 1405 RNLGFGWGVRQCVGRRIAELEMTLFLIHILEDFQ 1506
+ F G R C+G++ A EM + + L F+
Sbjct: 442 --MPFSGGSRNCIGKQFAMNEMKVAVALTLLRFE 473
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 42,836,365
Number of extensions: 1280121
Number of successful extensions: 4689
Number of sequences better than 1.0e-05: 55
Number of HSP's gapped: 4631
Number of HSP's successfully gapped: 56
Length of query: 528
Length of database: 11,343,932
Length adjustment: 104
Effective length of query: 424
Effective length of database: 8,754,644
Effective search space: 3711969056
Effective search space used: 3711969056
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-006991
(1586 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|GL892482.1| Sus scrofa unplaced genomic scaffold chrU_scaffol... 628 e-177
gb|GL893363.2| Sus scrofa unplaced genomic scaffold ChrUScaf1248 404 e-110
>gb|GL892482.1| Sus scrofa unplaced genomic scaffold chrU_scaffold1342
Length = 117911
Score = 628 bits (317), Expect = e-177
Identities = 323/325 (99%)
Strand = Plus / Plus
Query: 3 cctcatcaggccctgctgcagtgggagcagggagagtagcagtggtaggggcagcatgct 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 112578 cctcatcaggccctgctgcagtgggagcagggagagtagcagtggtaggggcagcatgct 112637
Query: 63 ggccagagggcttgccctccgctcagtcctggtcaaaggctgccagcccttcctgagtgc 122
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 112638 ggccagggggcttgccctccgctcagtcctggtcaaaggctgccagcccttcctgagtgc 112697
Query: 123 ccctcgggagtgcccagggcatcccagggtgggcactggagagggagcatgcatctccac 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 112698 ccctcgggagtgcccagggcatcccagggtgggcactggagagggagcatgcatctccac 112757
Query: 183 taaaacccctcgccccttcagtgaaatcccctctcctggtgacaatggctggattaacct 242
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 112758 taaaacccctcgccccttcagtgagatcccctctcctggtgacaatggctggattaacct 112817
Query: 243 gtaccgtttctggaaggagaagggcacacagaaaatccactatcaccatgtccagaactt 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 112818 gtaccgtttctggaaggagaagggcacacagaaaatccactatcaccatgtccagaactt 112877
Query: 303 ccagaagtatggtcccatttacagg 327
|||||||||||||||||||||||||
Sbjct: 112878 ccagaagtatggtcccatttacagg 112902
Score = 309 bits (156), Expect = 3e-81
Identities = 159/160 (99%)
Strand = Plus / Plus
Query: 324 cagggagaagctcggcaacttgggatctgtttatatcatcgaccctgaagatgtggccct 383
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 116234 cagggagaagctcggcaacttggaatctgtttatatcatcgaccctgaagatgtggccct 116293
Query: 384 tctctttaagttcgaaggacccaacccagaacgatacaacatcccgccctgggttgccta 443
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116294 tctctttaagttcgaaggacccaacccagaacgatacaacatcccgccctgggttgccta 116353
Query: 444 tcaccagcattaccagaagcctgttggggtcctgctgaag 483
||||||||||||||||||||||||||||||||||||||||
Sbjct: 116354 tcaccagcattaccagaagcctgttggggtcctgctgaag 116393
>gb|GL893363.2| Sus scrofa unplaced genomic scaffold ChrUScaf1248
Length = 166125
Score = 404 bits (204), Expect = e-110
Identities = 204/204 (100%)
Strand = Plus / Minus
Query: 683 ccatcaccaatgtcatatttggagagcgcctggggatgctggaggaaatagtggaccctg 742
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 164808 ccatcaccaatgtcatatttggagagcgcctggggatgctggaggaaatagtggaccctg 164749
Query: 743 aggctcagaagttcattgatgctgtctaccagatgttccacactagtgtccccatgctca 802
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 164748 aggctcagaagttcattgatgctgtctaccagatgttccacactagtgtccccatgctca 164689
Query: 803 atctcccccctgacctgttccgtctgttcaggaccaagacctggagggaccatgtagccg 862
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 164688 atctcccccctgacctgttccgtctgttcaggaccaagacctggagggaccatgtagccg 164629
Query: 863 catgggacactattttcaataaag 886
||||||||||||||||||||||||
Sbjct: 164628 catgggacactattttcaataaag 164605
Score = 396 bits (200), Expect = e-107
Identities = 200/200 (100%)
Strand = Plus / Minus
Query: 483 gaagtcaggagcctggaagaaagaccggttggtcctgaacacggaggtaatggctccaga 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165950 gaagtcaggagcctggaagaaagaccggttggtcctgaacacggaggtaatggctccaga 165891
Query: 543 ggccataaagaacttcatccccctactggacacagtgtctcaggacttcgtcggcgtcct 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165890 ggccataaagaacttcatccccctactggacacagtgtctcaggacttcgtcggcgtcct 165831
Query: 603 gcacaggcgcatcaagcagcagggttctggaaagttctcaggtgacatcagggaagacct 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165830 gcacaggcgcatcaagcagcagggttctggaaagttctcaggtgacatcagggaagacct 165771
Query: 663 gtttcgcttcgcctttgagt 682
||||||||||||||||||||
Sbjct: 165770 gtttcgcttcgcctttgagt 165751
Score = 381 bits (192), Expect = e-103
Identities = 198/200 (99%)
Strand = Plus / Minus
Query: 1289 agacattggtacaagtggccgtctatgccatgggccgagaccccgccttcttctcaaatc 1348
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159784 agacattggtacaagtggccgtctatgccatgggccgagaccccgccttcttctcaaatc 159725
Query: 1349 caggccagtttgacccaacccggtggttgggtaaagaaagggacctcatccacttccgga 1408
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159724 caggccagtttgacccaacccggtggttgggtaaagaaagggacctcatccacttccgga 159665
Query: 1409 acttgggctttggctggggcgtgcggcaatgtgtgggccggcggatcgctgagctcgaaa 1468
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
Sbjct: 159664 acttgggctttggctggggcgtgcggcagtgtgtgggccggcggatcgctgagctcgaga 159605
Query: 1469 tgactctcttcctcatccat 1488
||||||||||||||||||||
Sbjct: 159604 tgactctcttcctcatccat 159585
Score = 333 bits (168), Expect = 2e-88
Identities = 168/168 (100%)
Strand = Plus / Minus
Query: 1044 gacatccatgactctgcaatggcacttgtatgagatggcacgtagcctgaatgtgcagga 1103
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160913 gacatccatgactctgcaatggcacttgtatgagatggcacgtagcctgaatgtgcagga 160854
Query: 1104 gatgctgcgggaggaggtcctcaatgcccggcgccaggcccaaggagacacaagcaagat 1163
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160853 gatgctgcgggaggaggtcctcaatgcccggcgccaggcccaaggagacacaagcaagat 160794
Query: 1164 gctgcaattggtcccactcctcaaagctagcattaaggagacactgag 1211
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160793 gctgcaattggtcccactcctcaaagctagcattaaggagacactgag 160746
Score = 317 bits (160), Expect = 1e-83
Identities = 160/160 (100%)
Strand = Plus / Minus
Query: 885 agctgaaaaatacacccagaacttctactgggacctgagacggaaaagagaatttaacaa 944
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163828 agctgaaaaatacacccagaacttctactgggacctgagacggaaaagagaatttaacaa 163769
Query: 945 ttacccaggcatcctctaccgcctcctgggaaatgacaagctgctctcagaagatgttaa 1004
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163768 ttacccaggcatcctctaccgcctcctgggaaatgacaagctgctctcagaagatgttaa 163709
Query: 1005 ggccaatgttaccgagatgctggcagggggtgtagacacg 1044
||||||||||||||||||||||||||||||||||||||||
Sbjct: 163708 ggccaatgttaccgagatgctggcagggggtgtagacacg 163669
Score = 161 bits (81), Expect = 1e-36
Identities = 81/81 (100%)
Strand = Plus / Minus
Query: 1210 agactccaccccatctccgtgaccctgcagagatacctcgtgaatgacttggttcttcga 1269
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160394 agactccaccccatctccgtgaccctgcagagatacctcgtgaatgacttggttcttcga 160335
Query: 1270 gattacatgattcctgccaag 1290
|||||||||||||||||||||
Sbjct: 160334 gattacatgattcctgccaag 160314
Score = 95.6 bits (48), Expect = 7e-17
Identities = 72/79 (91%), Gaps = 1/79 (1%)
Strand = Plus / Minus
Query: 1509 tgaattgcagcacttcantgatgtggacacaatat-caaactcatcctgatgccggacag 1567
||||||||||||||||| |||||||||||| |||| ||| |||||||||||||||||||
Sbjct: 159190 tgaattgcagcacttcagtgatgtggacaccatattcaacctcatcctgatgccggacaa 159131
Query: 1568 gcccatcttcttggttttc 1586
|||||||||| | ||||||
Sbjct: 159130 gcccatcttccttgttttc 159112
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 43,368,668
Number of extensions: 277
Number of successful extensions: 277
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 276
Number of HSP's successfully gapped: 9
Length of query: 1586
Length of database: 2,808,509,378
Length adjustment: 22
Effective length of query: 1564
Effective length of database: 2,808,408,574
Effective search space: 4392351009736
Effective search space used: 4392351009736
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)