Animal-Genome cDNA 20110601C-006999

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-006999
         (1559 letters)

Database: RefSeq49_BP.fasta 
           33,088 sequences; 17,681,374 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_776524.1| L-lactate dehydrogenase A chain [Bos taurus].        619   e-177
Alignment   gi|NP_001106720.1| L-lactate dehydrogenase C isoform 1 [Bos tau...   502   e-142
Alignment   gi|NP_776525.1| L-lactate dehydrogenase B chain [Bos taurus].        496   e-140
Alignment   gi|NP_001030352.1| L-lactate dehydrogenase A-like 6B [Bos tauru...   478   e-135
Alignment   gi|XP_002699978.1| PREDICTED: lactate dehydrogenase A-like [Bos...   443   e-124
Alignment   gi|XP_001251829.2| PREDICTED: lactate dehydrogenase A isoform 1...   443   e-124
Alignment   gi|NP_001039887.2| L-lactate dehydrogenase C isoform 2 [Bos tau...   350   2e-96
Alignment   gi|NP_001092422.1| ubiquitin-conjugating enzyme E2 variant 3 [B...   214   1e-55
Alignment   gi|XP_002694110.1| PREDICTED: lactate dehydrogenase A-like [Bos...    87   4e-17
Alignment   gi|XP_002701606.1| PREDICTED: lactate dehydrogenase A [Bos taur...    87   4e-17

>ref|NP_776524.1| L-lactate dehydrogenase A chain [Bos taurus].
          Length = 332

 Score =  619 bits (1595), Expect = e-177
 Identities = 312/332 (93%), Positives = 315/332 (94%)
 Frame = +3

Query: 99   MATLKDQLIHNLLKEEHVPHNKITXXXXXXXXXXXXISILMKELADEIALVDVMEDKLKG 278
            MATLKDQLI NLLKEEHVP NKIT            ISILMK+LADE+ALVDVMEDKLKG
Sbjct: 1    MATLKDQLIQNLLKEEHVPQNKITIVGVGAVGMACAISILMKDLADEVALVDVMEDKLKG 60

Query: 279  EMMDLQHGSLFLRTPKIVSGKDYNVTANSRLVVITAGARQQEGESRLNLVQRNVNIFKFI 458
            EMMDLQHGSLFLRTPKIVSGKDYNVTANSRLV+ITAGARQQEGESRLNLVQRNVNIFKFI
Sbjct: 61   EMMDLQHGSLFLRTPKIVSGKDYNVTANSRLVIITAGARQQEGESRLNLVQRNVNIFKFI 120

Query: 459  IPNIVKYSPNCKLLVVSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGV 638
            IPNIVKYSPNCKLLVVSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGV
Sbjct: 121  IPNIVKYSPNCKLLVVSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGV 180

Query: 639  HPLSCHGWILGEHGDSSVPVWSGVNVAGVSLKNLHPELGTDADKEHWKAVHKQVVDSAYE 818
            HPLSCHGWILGEHGDSSVPVWSGVNVAGVSLKNLHPELGTDADKE WKAVHKQVVDSAYE
Sbjct: 181  HPLSCHGWILGEHGDSSVPVWSGVNVAGVSLKNLHPELGTDADKEQWKAVHKQVVDSAYE 240

Query: 819  VIKLKGYTSWAIGLSVADLAESIMKNLRRVHPISTMIKGLYGIKEDVFLSVPCILGQNGI 998
            VIKLKGYTSWAIGLSVADLAESIMKNLRRVHPISTMIKGLYGIKEDVFLSVPCILGQNGI
Sbjct: 241  VIKLKGYTSWAIGLSVADLAESIMKNLRRVHPISTMIKGLYGIKEDVFLSVPCILGQNGI 300

Query: 999  SDVVKVTLTPEEEAHLKKSADTLWGIQKELQF 1094
            SDVVKVTLT EEEA LKKSADTLWGIQKELQF
Sbjct: 301  SDVVKVTLTHEEEACLKKSADTLWGIQKELQF 332


>ref|NP_001106720.1| L-lactate dehydrogenase C isoform 1 [Bos taurus].
          Length = 332

 Score =  502 bits (1292), Expect = e-142
 Identities = 238/332 (71%), Positives = 287/332 (86%)
 Frame = +3

Query: 99   MATLKDQLIHNLLKEEHVPHNKITXXXXXXXXXXXXISILMKELADEIALVDVMEDKLKG 278
            M+++K+QLI NL++E+ V  +KIT            I IL+K+LADE+ALVDV+ DKLKG
Sbjct: 1    MSSVKEQLIENLIEEDEVSQSKITIVGTGAVGMACAICILLKDLADELALVDVVTDKLKG 60

Query: 279  EMMDLQHGSLFLRTPKIVSGKDYNVTANSRLVVITAGARQQEGESRLNLVQRNVNIFKFI 458
            E MDLQHGSLF  TPKIVSGKDY V+ANS+LV+ITAGARQQEGESRLNLVQRNV+I K +
Sbjct: 61   ETMDLQHGSLFFNTPKIVSGKDYTVSANSKLVIITAGARQQEGESRLNLVQRNVDIMKSV 120

Query: 459  IPNIVKYSPNCKLLVVSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGV 638
            IP IV+ SP+CK+L+VSNPVDILTYV WK+SG P  RVIGSGCNLDSARFRYL+G++LGV
Sbjct: 121  IPAIVQNSPDCKMLIVSNPVDILTYVVWKLSGLPATRVIGSGCNLDSARFRYLIGQKLGV 180

Query: 639  HPLSCHGWILGEHGDSSVPVWSGVNVAGVSLKNLHPELGTDADKEHWKAVHKQVVDSAYE 818
            HP SCHGWI+GEHGDSSVP+WSGVNVAGV+LK+L P+LG+D+DK+ WK +HK+VV SAYE
Sbjct: 181  HPSSCHGWIIGEHGDSSVPLWSGVNVAGVALKSLDPKLGSDSDKDSWKNIHKEVVGSAYE 240

Query: 819  VIKLKGYTSWAIGLSVADLAESIMKNLRRVHPISTMIKGLYGIKEDVFLSVPCILGQNGI 998
            +IKLKGYTSW IGLSV DL +SI+KNLRRVHP+STM+KG YGIKE++FLS+PC+LG+NG+
Sbjct: 241  IIKLKGYTSWGIGLSVTDLVKSILKNLRRVHPVSTMVKGSYGIKEEIFLSIPCVLGRNGV 300

Query: 999  SDVVKVTLTPEEEAHLKKSADTLWGIQKELQF 1094
            SDVVKV L  EEEA LKKSA TLW +QK+L+F
Sbjct: 301  SDVVKVNLNSEEEALLKKSASTLWNVQKDLKF 332


>ref|NP_776525.1| L-lactate dehydrogenase B chain [Bos taurus].
          Length = 334

 Score =  496 bits (1276), Expect = e-140
 Identities = 242/332 (72%), Positives = 283/332 (85%), Gaps = 1/332 (0%)
 Frame = +3

Query: 99   MATLKDQLIHNLLKEEH-VPHNKITXXXXXXXXXXXXISILMKELADEIALVDVMEDKLK 275
            MATLK++LI  + +EE  +P+NKIT            ISIL K L DE+ALVDV+EDKLK
Sbjct: 1    MATLKEKLIAPVAEEETTIPNNKITVVGVGQVGMACAISILGKSLTDELALVDVLEDKLK 60

Query: 276  GEMMDLQHGSLFLRTPKIVSGKDYNVTANSRLVVITAGARQQEGESRLNLVQRNVNIFKF 455
            GEMMDLQHGSLFL+TPKIV+ KDY+VTANS++VV+TAG RQQEGESRLNLVQRNVN+FKF
Sbjct: 61   GEMMDLQHGSLFLQTPKIVADKDYSVTANSKIVVVTAGVRQQEGESRLNLVQRNVNVFKF 120

Query: 456  IIPNIVKYSPNCKLLVVSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLG 635
            IIP IVKYSP C ++VVSNPVDILTYV WK+SG PK+RVIGSGCNLDSARFRYLM E+LG
Sbjct: 121  IIPQIVKYSPACIIIVVSNPVDILTYVTWKLSGLPKHRVIGSGCNLDSARFRYLMAEKLG 180

Query: 636  VHPLSCHGWILGEHGDSSVPVWSGVNVAGVSLKNLHPELGTDADKEHWKAVHKQVVDSAY 815
            +HP SCHGWILGEHGDSSV VWSGVNVAGVSL+ L+PE+GTD D E+WK VHK VV+SAY
Sbjct: 181  IHPSSCHGWILGEHGDSSVAVWSGVNVAGVSLQELNPEMGTDNDSENWKEVHKMVVESAY 240

Query: 816  EVIKLKGYTSWAIGLSVADLAESIMKNLRRVHPISTMIKGLYGIKEDVFLSVPCILGQNG 995
            EVIKLKGYT+WAIGLSVADL ES++KNL R+HP+STM+KG+YGI+ +VFLS+PCIL   G
Sbjct: 241  EVIKLKGYTNWAIGLSVADLIESMLKNLSRIHPVSTMVKGMYGIENEVFLSLPCILNARG 300

Query: 996  ISDVVKVTLTPEEEAHLKKSADTLWGIQKELQ 1091
            ++ V+   L  EE A LKKSADTLWGIQK+L+
Sbjct: 301  LTSVINQKLKDEEVAQLKKSADTLWGIQKDLK 332


>ref|NP_001030352.1| L-lactate dehydrogenase A-like 6B [Bos taurus].
          Length = 381

 Score =  478 bits (1230), Expect = e-135
 Identities = 239/353 (67%), Positives = 286/353 (81%), Gaps = 1/353 (0%)
 Frame = +3

Query: 39   CAPP-TPARSALPIPFGSKSTMATLKDQLIHNLLKEEHVPHNKITXXXXXXXXXXXXISI 215
            C P  TP   A  +   SK  MAT+K +L+ N   EE V ++KI+            +SI
Sbjct: 31   CPPAATPLGGAWAVAPASK--MATVKCELMKNFTSEEPVRNSKISIVGTGSVGMACAVSI 88

Query: 216  LMKELADEIALVDVMEDKLKGEMMDLQHGSLFLRTPKIVSGKDYNVTANSRLVVITAGAR 395
            L+K L+DE+ALVDV E +LKGE MDLQHGSLF++ P IVS +DY VTANS LV+ITAGAR
Sbjct: 89   LLKGLSDELALVDVDEGRLKGETMDLQHGSLFVKMPNIVSSRDYVVTANSNLVIITAGAR 148

Query: 396  QQEGESRLNLVQRNVNIFKFIIPNIVKYSPNCKLLVVSNPVDILTYVAWKISGFPKNRVI 575
            Q++GE+RLNLVQRNV IFK ++ +IV+YSP CKL+VVSNPVDILTYVAWK+S FP+NRVI
Sbjct: 149  QEKGETRLNLVQRNVAIFKLMMSSIVQYSPRCKLIVVSNPVDILTYVAWKLSAFPQNRVI 208

Query: 576  GSGCNLDSARFRYLMGERLGVHPLSCHGWILGEHGDSSVPVWSGVNVAGVSLKNLHPELG 755
            GSGCNLD+ARFR+L+G+RL +H  SCHGWILGEHGDSSVPVWSGVN+AGV LK L+ ++G
Sbjct: 209  GSGCNLDTARFRFLIGQRLSIHSESCHGWILGEHGDSSVPVWSGVNIAGVPLKELNLDIG 268

Query: 756  TDADKEHWKAVHKQVVDSAYEVIKLKGYTSWAIGLSVADLAESIMKNLRRVHPISTMIKG 935
            TD D E WK VHK VV SAYE+IK+KGYT WAIGLSVADL ESI+KNLRRVHP+ST IKG
Sbjct: 269  TDKDPEQWKNVHKDVVASAYEIIKMKGYTYWAIGLSVADLTESILKNLRRVHPVSTRIKG 328

Query: 936  LYGIKEDVFLSVPCILGQNGISDVVKVTLTPEEEAHLKKSADTLWGIQKELQF 1094
            LYGI E+VFLSVPCILG++GI+D++KV L PEEEA L+KSA TLW IQKEL+F
Sbjct: 329  LYGINEEVFLSVPCILGESGITDLIKVKLAPEEEARLQKSAKTLWDIQKELKF 381


>ref|XP_002699978.1| PREDICTED: lactate dehydrogenase A-like [Bos taurus].
          Length = 274

 Score =  443 bits (1140), Expect = e-124
 Identities = 241/332 (72%), Positives = 247/332 (74%)
 Frame = +3

Query: 99   MATLKDQLIHNLLKEEHVPHNKITXXXXXXXXXXXXISILMKELADEIALVDVMEDKLKG 278
            MATLKDQLI NLLKEEHVP NKIT            ISILMK+LADE+ALVDVMED LKG
Sbjct: 1    MATLKDQLIQNLLKEEHVPQNKITIVGVGAVGMACAISILMKDLADEVALVDVMEDILKG 60

Query: 279  EMMDLQHGSLFLRTPKIVSGKDYNVTANSRLVVITAGARQQEGESRLNLVQRNVNIFKFI 458
            EMMDLQHGSLFLRTPKIVSGK                                V+I  ++
Sbjct: 61   EMMDLQHGSLFLRTPKIVSGK--------------------------------VDILTYV 88

Query: 459  IPNIVKYSPNCKLLVVSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGV 638
               I  +  N                          RVIGSGCNLDSARFRYLMGERLGV
Sbjct: 89   AWKISGFPKN--------------------------RVIGSGCNLDSARFRYLMGERLGV 122

Query: 639  HPLSCHGWILGEHGDSSVPVWSGVNVAGVSLKNLHPELGTDADKEHWKAVHKQVVDSAYE 818
            HPLSCHGWILGEHGDSSVPVWSGVNVAGVSLKNLHPELGTDADKE WKAVHKQVVDSAYE
Sbjct: 123  HPLSCHGWILGEHGDSSVPVWSGVNVAGVSLKNLHPELGTDADKEQWKAVHKQVVDSAYE 182

Query: 819  VIKLKGYTSWAIGLSVADLAESIMKNLRRVHPISTMIKGLYGIKEDVFLSVPCILGQNGI 998
            VIKLKGYTSWAIGLSVADLAESIMKNLRRVHPISTMIKGLYGIKEDVFLSVPCILGQNGI
Sbjct: 183  VIKLKGYTSWAIGLSVADLAESIMKNLRRVHPISTMIKGLYGIKEDVFLSVPCILGQNGI 242

Query: 999  SDVVKVTLTPEEEAHLKKSADTLWGIQKELQF 1094
            SDVVKVTLT EEEA LKKSADTLWGIQKELQF
Sbjct: 243  SDVVKVTLTHEEEACLKKSADTLWGIQKELQF 274


>ref|XP_001251829.2| PREDICTED: lactate dehydrogenase A isoform 1 [Bos taurus].
          Length = 274

 Score =  443 bits (1140), Expect = e-124
 Identities = 241/332 (72%), Positives = 247/332 (74%)
 Frame = +3

Query: 99   MATLKDQLIHNLLKEEHVPHNKITXXXXXXXXXXXXISILMKELADEIALVDVMEDKLKG 278
            MATLKDQLI NLLKEEHVP NKIT            ISILMK+LADE+ALVDVMED LKG
Sbjct: 1    MATLKDQLIQNLLKEEHVPQNKITIVGVGAVGMACAISILMKDLADEVALVDVMEDILKG 60

Query: 279  EMMDLQHGSLFLRTPKIVSGKDYNVTANSRLVVITAGARQQEGESRLNLVQRNVNIFKFI 458
            EMMDLQHGSLFLRTPKIVSGK                                V+I  ++
Sbjct: 61   EMMDLQHGSLFLRTPKIVSGK--------------------------------VDILTYV 88

Query: 459  IPNIVKYSPNCKLLVVSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGV 638
               I  +  N                          RVIGSGCNLDSARFRYLMGERLGV
Sbjct: 89   AWKISGFPKN--------------------------RVIGSGCNLDSARFRYLMGERLGV 122

Query: 639  HPLSCHGWILGEHGDSSVPVWSGVNVAGVSLKNLHPELGTDADKEHWKAVHKQVVDSAYE 818
            HPLSCHGWILGEHGDSSVPVWSGVNVAGVSLKNLHPELGTDADKE WKAVHKQVVDSAYE
Sbjct: 123  HPLSCHGWILGEHGDSSVPVWSGVNVAGVSLKNLHPELGTDADKEQWKAVHKQVVDSAYE 182

Query: 819  VIKLKGYTSWAIGLSVADLAESIMKNLRRVHPISTMIKGLYGIKEDVFLSVPCILGQNGI 998
            VIKLKGYTSWAIGLSVADLAESIMKNLRRVHPISTMIKGLYGIKEDVFLSVPCILGQNGI
Sbjct: 183  VIKLKGYTSWAIGLSVADLAESIMKNLRRVHPISTMIKGLYGIKEDVFLSVPCILGQNGI 242

Query: 999  SDVVKVTLTPEEEAHLKKSADTLWGIQKELQF 1094
            SDVVKVTLT EEEA LKKSADTLWGIQKELQF
Sbjct: 243  SDVVKVTLTHEEEACLKKSADTLWGIQKELQF 274


>ref|NP_001039887.2| L-lactate dehydrogenase C isoform 2 [Bos taurus].
          Length = 241

 Score =  350 bits (899), Expect = 2e-96
 Identities = 167/239 (69%), Positives = 203/239 (84%)
 Frame = +3

Query: 99  MATLKDQLIHNLLKEEHVPHNKITXXXXXXXXXXXXISILMKELADEIALVDVMEDKLKG 278
           M+++K+QLI NL++E+ V  +KIT            I IL+K+LADE+ALVDV+ DKLKG
Sbjct: 1   MSSVKEQLIENLIEEDEVSQSKITIVGTGAVGMACAICILLKDLADELALVDVVTDKLKG 60

Query: 279 EMMDLQHGSLFLRTPKIVSGKDYNVTANSRLVVITAGARQQEGESRLNLVQRNVNIFKFI 458
           E MDLQHGSLF  TPKIVSGKDY V+ANS+LV+ITAGARQQEGESRLNLVQRNV+I K +
Sbjct: 61  ETMDLQHGSLFFNTPKIVSGKDYTVSANSKLVIITAGARQQEGESRLNLVQRNVDIMKSV 120

Query: 459 IPNIVKYSPNCKLLVVSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGV 638
           IP IV+ SP+CK+L+VSNPVDILTYV WK+SG P  RVIGSGCNLDSARFRYL+G++LGV
Sbjct: 121 IPAIVQNSPDCKMLIVSNPVDILTYVVWKLSGLPATRVIGSGCNLDSARFRYLIGQKLGV 180

Query: 639 HPLSCHGWILGEHGDSSVPVWSGVNVAGVSLKNLHPELGTDADKEHWKAVHKQVVDSAY 815
           HP SCHGWI+GEHGDSSVP+WSGVNVAGV+LK+L P+LG+D+DK+ WK +HK+VV  A+
Sbjct: 181 HPSSCHGWIIGEHGDSSVPLWSGVNVAGVALKSLDPKLGSDSDKDSWKNIHKEVVGRAH 239


>ref|NP_001092422.1| ubiquitin-conjugating enzyme E2 variant 3 [Bos taurus].
          Length = 471

 Score =  214 bits (546), Expect = 1e-55
 Identities = 122/322 (37%), Positives = 189/322 (58%), Gaps = 1/322 (0%)
 Frame = +3

Query: 129  NLLKEEHVPHNKITXXXXXXXXXXXXISILMKELADEIALVDVMEDKLKGEMMDLQHGSL 308
            N    E+   NKIT            ++I  K +AD++ L+D  E   KG MMDL   +L
Sbjct: 173  NWANRENKTVNKITVVGGGELGIACTLAISAKGIADKLVLLDFSEGT-KGGMMDLDIFNL 231

Query: 309  FLRTPKIVSGKDYNVTANSRLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKYSPN 488
                P +   KD + +A+S++V+ T  +     +S L++VQ NV++F+ ++P +  YS +
Sbjct: 232  ----PNVEISKDLSASAHSKVVIFTVNSLGSS-QSYLDVVQSNVDMFRALVPALGHYSQH 286

Query: 489  CKLLVVSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGVHPLSCHGWIL 668
              LLV S PV+I+TYV WK+S FP NRVIG GCNLDS R +Y++   L         W++
Sbjct: 287  AILLVASQPVEIMTYVTWKLSAFPANRVIGIGCNLDSQRLQYIITNVLKAQTSGKEVWVI 346

Query: 669  GEHGDSSVPVWSGVNVAGVSLKNLHPELGTDADKEHWKAVHKQVVDSAYEVIKLKGYTSW 848
            GE G+  VP+WSG             E  T+ D +       Q+ + A E++++KG  SW
Sbjct: 347  GEQGEDKVPIWSG------------QEEVTNHDSQ------MQLSNRAMELLRVKGQRSW 388

Query: 849  AIGLSVADLAESIMKNLRRVHPISTMIKGLYGIKEDVFLSVPCILGQNGISDVVKVTLTP 1028
            ++GLSVADL +SI+ + ++VH +S + KG Y I  +VFLS+PCILG +G+S+V+K T+  
Sbjct: 389  SVGLSVADLLDSIVNDKKKVHSVSILAKGYYDINSEVFLSLPCILGTSGVSEVIKTTVKE 448

Query: 1029 EEEAH-LKKSADTLWGIQKELQ 1091
            E     L+ SA ++ G+Q++L+
Sbjct: 449  ETVTEKLQSSASSIHGLQQQLK 470


>ref|XP_002694110.1| PREDICTED: lactate dehydrogenase A-like [Bos taurus].
          Length = 120

 Score = 87.0 bits (214), Expect = 4e-17
 Identities = 50/82 (60%), Positives = 58/82 (70%), Gaps = 1/82 (1%)
 Frame = +3

Query: 99  MATLKDQLIHNLLKEEH-VPHNKITXXXXXXXXXXXXISILMKELADEIALVDVMEDKLK 275
           MATL ++LI  + +EE  VP+NKIT            ISIL K L DE ALVDV+EDKLK
Sbjct: 1   MATLTEKLIAPVAEEEGTVPNNKITVEGTGQVSMVFTISILGKSLTDEFALVDVLEDKLK 60

Query: 276 GEMMDLQHGSLFLRTPKIVSGK 341
           GEMMDLQH SLFL+TPKIV+ K
Sbjct: 61  GEMMDLQHKSLFLQTPKIVADK 82



 Score = 58.9 bits (141), Expect = 1e-08
 Identities = 27/42 (64%), Positives = 32/42 (76%)
 Frame = +3

Query: 501 VVSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGE 626
           +V++  DILTY+ WK SG PK+ VI SGCNLDSA FR LM E
Sbjct: 78  IVADKADILTYITWKPSGLPKHCVIASGCNLDSAIFRCLMAE 119


>ref|XP_002701606.1| PREDICTED: lactate dehydrogenase A [Bos taurus].
          Length = 120

 Score = 87.0 bits (214), Expect = 4e-17
 Identities = 50/82 (60%), Positives = 58/82 (70%), Gaps = 1/82 (1%)
 Frame = +3

Query: 99  MATLKDQLIHNLLKEEH-VPHNKITXXXXXXXXXXXXISILMKELADEIALVDVMEDKLK 275
           MATL ++LI  + +EE  VP+NKIT            ISIL K L DE ALVDV+EDKLK
Sbjct: 1   MATLTEKLIAPVAEEEGTVPNNKITVEGTGQVSMVFTISILGKSLTDEFALVDVLEDKLK 60

Query: 276 GEMMDLQHGSLFLRTPKIVSGK 341
           GEMMDLQH SLFL+TPKIV+ K
Sbjct: 61  GEMMDLQHKSLFLQTPKIVADK 82



 Score = 58.9 bits (141), Expect = 1e-08
 Identities = 27/42 (64%), Positives = 32/42 (76%)
 Frame = +3

Query: 501 VVSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGE 626
           +V++  DILTY+ WK SG PK+ VI SGCNLDSA FR LM E
Sbjct: 78  IVADKADILTYITWKPSGLPKHCVIASGCNLDSAIFRCLMAE 119


  Database: RefSeq49_BP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 17,681,374
  Number of sequences in database:  33,088
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 59,844,945
Number of extensions: 1584882
Number of successful extensions: 4242
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 4236
Number of HSP's successfully gapped: 14
Length of query: 519
Length of database: 17,681,374
Length adjustment: 107
Effective length of query: 412
Effective length of database: 14,140,958
Effective search space: 5826074696
Effective search space used: 5826074696
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-006999
         (1559 letters)

Database: RefSeq49_CP.fasta 
           33,336 sequences; 18,874,504 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_534084.2| PREDICTED: similar to L-lactate dehydrogenase A...   628   e-180
Alignment   gi|XP_865353.1| PREDICTED: similar to L-lactate dehydrogenase A...   614   e-176
Alignment   gi|XP_547812.1| PREDICTED: similar to L-lactate dehydrogenase A...   556   e-158
Alignment   gi|XP_542567.1| PREDICTED: similar to L-lactate dehydrogenase A...   551   e-157
Alignment   gi|XP_534085.2| PREDICTED: similar to lactate dehydrogenase C [...   504   e-142
Alignment   gi|XP_534868.1| PREDICTED: similar to L-lactate dehydrogenase B...   494   e-140
Alignment   gi|XP_538125.1| PREDICTED: similar to L-lactate dehydrogenase B...   486   e-137
Alignment   gi|XP_541165.1| PREDICTED: similar to lactate dehydrogenase A-l...   485   e-137
Alignment   gi|XP_532332.1| PREDICTED: similar to L-lactate dehydrogenase B...   480   e-135
Alignment   gi|XP_535075.1| PREDICTED: similar to L-lactate dehydrogenase B...   470   e-132

>ref|XP_534084.2| PREDICTED: similar to L-lactate dehydrogenase A chain (LDH-A) (LDH
            muscle subunit) (LDH-M) (Proliferation-inducing gene 19
            protein) isoform 1 [Canis familiaris].
          Length = 361

 Score =  628 bits (1619), Expect = e-180
 Identities = 313/340 (92%), Positives = 321/340 (94%)
 Frame = +3

Query: 75   IPFGSKSTMATLKDQLIHNLLKEEHVPHNKITXXXXXXXXXXXXISILMKELADEIALVD 254
            IPFGSKS MATLKDQLI NLLKE+H P NKIT            ISILMK+LADE+ALVD
Sbjct: 22   IPFGSKSKMATLKDQLIQNLLKEDHTPQNKITVVGVGAVGMACAISILMKDLADELALVD 81

Query: 255  VMEDKLKGEMMDLQHGSLFLRTPKIVSGKDYNVTANSRLVVITAGARQQEGESRLNLVQR 434
            VMEDKLKGEMMDLQHGSLFLRTPKIVSGKDYNVTANS+LV+ITAGARQQEGESRLNLVQR
Sbjct: 82   VMEDKLKGEMMDLQHGSLFLRTPKIVSGKDYNVTANSKLVIITAGARQQEGESRLNLVQR 141

Query: 435  NVNIFKFIIPNIVKYSPNCKLLVVSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRY 614
            NVNIFKFIIPNIVKYSPNCKLLVVSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRY
Sbjct: 142  NVNIFKFIIPNIVKYSPNCKLLVVSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRY 201

Query: 615  LMGERLGVHPLSCHGWILGEHGDSSVPVWSGVNVAGVSLKNLHPELGTDADKEHWKAVHK 794
            LMGERLGVHPLSCHGW+LGEHGDSSVPVWSGVNVAGVSLKNLHP+LGTDADKE WK VHK
Sbjct: 202  LMGERLGVHPLSCHGWVLGEHGDSSVPVWSGVNVAGVSLKNLHPDLGTDADKEQWKQVHK 261

Query: 795  QVVDSAYEVIKLKGYTSWAIGLSVADLAESIMKNLRRVHPISTMIKGLYGIKEDVFLSVP 974
            QVVDSAYEVIKLKGYTSWAIGLSVADLAESIMKNLRRVHPISTMIKGLYGIK+DVFLSVP
Sbjct: 262  QVVDSAYEVIKLKGYTSWAIGLSVADLAESIMKNLRRVHPISTMIKGLYGIKDDVFLSVP 321

Query: 975  CILGQNGISDVVKVTLTPEEEAHLKKSADTLWGIQKELQF 1094
            CILGQNGISDVVKVTLTPEEEA LKKSADTLWGIQKELQF
Sbjct: 322  CILGQNGISDVVKVTLTPEEEARLKKSADTLWGIQKELQF 361


>ref|XP_865353.1| PREDICTED: similar to L-lactate dehydrogenase A chain (LDH-A) (LDH
            muscle subunit) (LDH-M) (Proliferation-inducing gene 19
            protein) isoform 2 [Canis familiaris].
          Length = 332

 Score =  614 bits (1584), Expect = e-176
 Identities = 306/332 (92%), Positives = 314/332 (94%)
 Frame = +3

Query: 99   MATLKDQLIHNLLKEEHVPHNKITXXXXXXXXXXXXISILMKELADEIALVDVMEDKLKG 278
            MATLKDQLI NLLKE+H P NKIT            ISILMK+LADE+ALVDVMEDKLKG
Sbjct: 1    MATLKDQLIQNLLKEDHTPQNKITVVGVGAVGMACAISILMKDLADELALVDVMEDKLKG 60

Query: 279  EMMDLQHGSLFLRTPKIVSGKDYNVTANSRLVVITAGARQQEGESRLNLVQRNVNIFKFI 458
            EMMDLQHGSLFLRTPKIVSGKDYNVTANS+LV+ITAGARQQEGESRLNLVQRNVNIFKFI
Sbjct: 61   EMMDLQHGSLFLRTPKIVSGKDYNVTANSKLVIITAGARQQEGESRLNLVQRNVNIFKFI 120

Query: 459  IPNIVKYSPNCKLLVVSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGV 638
            IPNIVKYSPNCKLLVVSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGV
Sbjct: 121  IPNIVKYSPNCKLLVVSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGV 180

Query: 639  HPLSCHGWILGEHGDSSVPVWSGVNVAGVSLKNLHPELGTDADKEHWKAVHKQVVDSAYE 818
            HPLSCHGW+LGEHGDSSVPVWSGVNVAGVSLKNLHP+LGTDADKE WK VHKQVVDSAYE
Sbjct: 181  HPLSCHGWVLGEHGDSSVPVWSGVNVAGVSLKNLHPDLGTDADKEQWKQVHKQVVDSAYE 240

Query: 819  VIKLKGYTSWAIGLSVADLAESIMKNLRRVHPISTMIKGLYGIKEDVFLSVPCILGQNGI 998
            VIKLKGYTSWAIGLSVADLAESIMKNLRRVHPISTMIKGLYGIK+DVFLSVPCILGQNGI
Sbjct: 241  VIKLKGYTSWAIGLSVADLAESIMKNLRRVHPISTMIKGLYGIKDDVFLSVPCILGQNGI 300

Query: 999  SDVVKVTLTPEEEAHLKKSADTLWGIQKELQF 1094
            SDVVKVTLTPEEEA LKKSADTLWGIQKELQF
Sbjct: 301  SDVVKVTLTPEEEARLKKSADTLWGIQKELQF 332


>ref|XP_547812.1| PREDICTED: similar to L-lactate dehydrogenase A chain (LDH-A) (LDH
            muscle subunit) (LDH-M) (Proliferation-inducing gene 19
            protein) [Canis familiaris].
          Length = 330

 Score =  556 bits (1433), Expect = e-158
 Identities = 280/332 (84%), Positives = 299/332 (90%)
 Frame = +3

Query: 99   MATLKDQLIHNLLKEEHVPHNKITXXXXXXXXXXXXISILMKELADEIALVDVMEDKLKG 278
            MATLKDQLI NLLKE+++  NKIT            ISILMK+LADE+ALVDVMEDKLK 
Sbjct: 1    MATLKDQLIQNLLKEDNISQNKITVIGVGAIGMTCAISILMKDLADELALVDVMEDKLKE 60

Query: 279  EMMDLQHGSLFLRTPKIVSGKDYNVTANSRLVVITAGARQQEGESRLNLVQRNVNIFKFI 458
            E MDLQH SLF RTPKIVSGKDYNVTANS+L +ITAGA QQEGESRLNL+QRN+NIFKFI
Sbjct: 61   ETMDLQHSSLFFRTPKIVSGKDYNVTANSKLAIITAGACQQEGESRLNLIQRNLNIFKFI 120

Query: 459  IPNIVKYSPNCKLLVVSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGV 638
            IPNIVKYSPNCKLLVVSNPV+I TYVAWKI+GFPKN +IGS CNLDSARFRYL+GERLGV
Sbjct: 121  IPNIVKYSPNCKLLVVSNPVNIFTYVAWKITGFPKNCIIGSDCNLDSARFRYLIGERLGV 180

Query: 639  HPLSCHGWILGEHGDSSVPVWSGVNVAGVSLKNLHPELGTDADKEHWKAVHKQVVDSAYE 818
            HPLSCH W+LGEHGDSSVPVWSG NVAGVSLKNLHP+LGTDADKE WK V+KQVVDSAYE
Sbjct: 181  HPLSCHRWVLGEHGDSSVPVWSGANVAGVSLKNLHPDLGTDADKEQWKEVYKQVVDSAYE 240

Query: 819  VIKLKGYTSWAIGLSVADLAESIMKNLRRVHPISTMIKGLYGIKEDVFLSVPCILGQNGI 998
            VIKLKGYTSWAIGLSVADLAESI KN R VHPISTMIKGLYGIK+DVFLSVPCILGQNGI
Sbjct: 241  VIKLKGYTSWAIGLSVADLAESITKNFRWVHPISTMIKGLYGIKDDVFLSVPCILGQNGI 300

Query: 999  SDVVKVTLTPEEEAHLKKSADTLWGIQKELQF 1094
            SD V+VTLTPEEEAHL K+ADTLWGIQKELQF
Sbjct: 301  SD-VRVTLTPEEEAHL-KNADTLWGIQKELQF 330


>ref|XP_542567.1| PREDICTED: similar to L-lactate dehydrogenase A chain (LDH-A) (LDH
            muscle subunit) (LDH-M) (Proliferation-inducing gene 19
            protein) [Canis familiaris].
          Length = 332

 Score =  551 bits (1421), Expect = e-157
 Identities = 281/332 (84%), Positives = 291/332 (87%)
 Frame = +3

Query: 99   MATLKDQLIHNLLKEEHVPHNKITXXXXXXXXXXXXISILMKELADEIALVDVMEDKLKG 278
            MA LKDQL  NLLKE+H+P NKIT            ISILMK+LA E+ALVDVMEDKLKG
Sbjct: 1    MAILKDQLTQNLLKEDHIPQNKITVVEVGAVGLACAISILMKDLAGELALVDVMEDKLKG 60

Query: 279  EMMDLQHGSLFLRTPKIVSGKDYNVTANSRLVVITAGARQQEGESRLNLVQRNVNIFKFI 458
            EMMDLQHGSLFLRT KIVS KDYNVTANS+LV+ITAG RQQEGES LNL Q NVNIFKFI
Sbjct: 61   EMMDLQHGSLFLRTLKIVSCKDYNVTANSKLVIITAGPRQQEGESCLNLAQHNVNIFKFI 120

Query: 459  IPNIVKYSPNCKLLVVSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGV 638
            IPNIVKYSPNCKLLVVS+PVDILTYVAWKISGFPK  V GSGCNLDSARFRYLMGERLGV
Sbjct: 121  IPNIVKYSPNCKLLVVSSPVDILTYVAWKISGFPKTHVFGSGCNLDSARFRYLMGERLGV 180

Query: 639  HPLSCHGWILGEHGDSSVPVWSGVNVAGVSLKNLHPELGTDADKEHWKAVHKQVVDSAYE 818
            HPLSCHGW+LGEHGD+SVPV SG NVAGVSLKN HP+L TDADKE WK  HKQVVDSAYE
Sbjct: 181  HPLSCHGWVLGEHGDASVPVRSGGNVAGVSLKNPHPDLATDADKEQWKEGHKQVVDSAYE 240

Query: 819  VIKLKGYTSWAIGLSVADLAESIMKNLRRVHPISTMIKGLYGIKEDVFLSVPCILGQNGI 998
            VIKLKGYTSW IGLSVA  AE IMKNLR VHPIST IKGLYGIKEDVFLSVPCILGQNGI
Sbjct: 241  VIKLKGYTSWPIGLSVAYSAERIMKNLRWVHPISTTIKGLYGIKEDVFLSVPCILGQNGI 300

Query: 999  SDVVKVTLTPEEEAHLKKSADTLWGIQKELQF 1094
            SDVVK TLTPEEEA LKKSADTLWGIQKELQF
Sbjct: 301  SDVVKGTLTPEEEARLKKSADTLWGIQKELQF 332


>ref|XP_534085.2| PREDICTED: similar to lactate dehydrogenase C [Canis familiaris].
          Length = 420

 Score =  504 bits (1297), Expect = e-142
 Identities = 239/332 (71%), Positives = 283/332 (85%)
 Frame = +3

Query: 99   MATLKDQLIHNLLKEEHVPHNKITXXXXXXXXXXXXISILMKELADEIALVDVMEDKLKG 278
            M+T+K++LI NL++E+ +   KIT            I IL+K+LADE+ALVDV  DKLKG
Sbjct: 89   MSTVKEKLIENLIEEDKISQRKITIVGTGAVGMACAICILLKDLADELALVDVAVDKLKG 148

Query: 279  EMMDLQHGSLFLRTPKIVSGKDYNVTANSRLVVITAGARQQEGESRLNLVQRNVNIFKFI 458
            E MDLQHGSLF  T KI SGKDY+V+ANS+LV++TAGARQQEGESRL LVQRNVNI K I
Sbjct: 149  ETMDLQHGSLFFNTSKITSGKDYSVSANSKLVIVTAGARQQEGESRLALVQRNVNIMKSI 208

Query: 459  IPNIVKYSPNCKLLVVSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGV 638
            IP IV++SP+CK+L+VSNPVDILTYV WK+SG P  RV GSGCNLDSARFRYL+GE+LGV
Sbjct: 209  IPAIVQHSPDCKMLIVSNPVDILTYVVWKLSGLPATRVFGSGCNLDSARFRYLIGEKLGV 268

Query: 639  HPLSCHGWILGEHGDSSVPVWSGVNVAGVSLKNLHPELGTDADKEHWKAVHKQVVDSAYE 818
            HP SCHGWI+GEHGDSSVP+WSGVNVAGV+LK L P+LGTDADK+ WK +HKQVV+SAYE
Sbjct: 269  HPTSCHGWIIGEHGDSSVPLWSGVNVAGVALKTLDPKLGTDADKDQWKNIHKQVVESAYE 328

Query: 819  VIKLKGYTSWAIGLSVADLAESIMKNLRRVHPISTMIKGLYGIKEDVFLSVPCILGQNGI 998
            +IKLKGYTSWAIGLSV DL  S++KNLRRVHP+STM+KGLYGIKE++FLS+PC+LGQNG+
Sbjct: 329  IIKLKGYTSWAIGLSVTDLVGSVLKNLRRVHPVSTMVKGLYGIKEEIFLSIPCVLGQNGV 388

Query: 999  SDVVKVTLTPEEEAHLKKSADTLWGIQKELQF 1094
            SD+VKV L  +EEA  KKSADTLW +QKEL F
Sbjct: 389  SDIVKVNLNSDEEALFKKSADTLWNVQKELVF 420


>ref|XP_534868.1| PREDICTED: similar to L-lactate dehydrogenase B chain (LDH-B) (LDH
            heart subunit) (LDH-H) [Canis familiaris].
          Length = 334

 Score =  494 bits (1273), Expect = e-140
 Identities = 241/332 (72%), Positives = 284/332 (85%), Gaps = 1/332 (0%)
 Frame = +3

Query: 99   MATLKDQLIHNLLKEEH-VPHNKITXXXXXXXXXXXXISILMKELADEIALVDVMEDKLK 275
            MATLK++LI  + +EE  +P+NKIT            ISIL K LADE+ALVDV+EDKLK
Sbjct: 1    MATLKEKLIAPVAEEEAAIPNNKITVVGVGQVGMACAISILGKSLADELALVDVLEDKLK 60

Query: 276  GEMMDLQHGSLFLRTPKIVSGKDYNVTANSRLVVITAGARQQEGESRLNLVQRNVNIFKF 455
            GEMMDLQHGSLFL+TPKIV+ KDY+VTANS++VV+TAG RQQEGESRLNLVQRNVN+FKF
Sbjct: 61   GEMMDLQHGSLFLQTPKIVADKDYSVTANSKIVVVTAGVRQQEGESRLNLVQRNVNVFKF 120

Query: 456  IIPNIVKYSPNCKLLVVSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLG 635
            IIP IVKYSP+C ++VVSNPVDILTYV WK+SG PK+RVIGSGCNLDSARFRYLM E+LG
Sbjct: 121  IIPQIVKYSPDCIIIVVSNPVDILTYVTWKLSGLPKHRVIGSGCNLDSARFRYLMAEKLG 180

Query: 636  VHPLSCHGWILGEHGDSSVPVWSGVNVAGVSLKNLHPELGTDADKEHWKAVHKQVVDSAY 815
            +HP SCHGWILGEHGDSSV VWSGVNVAGVSL+ L+PE+GTD D E+WK VHK VV+SAY
Sbjct: 181  IHPSSCHGWILGEHGDSSVAVWSGVNVAGVSLQELNPEMGTDNDSENWKEVHKMVVESAY 240

Query: 816  EVIKLKGYTSWAIGLSVADLAESIMKNLRRVHPISTMIKGLYGIKEDVFLSVPCILGQNG 995
            EVIKLKGYT+WAIGLSVADL ES++KNL R+HP+STM+KG+YGI+ +VFLS+PCIL   G
Sbjct: 241  EVIKLKGYTNWAIGLSVADLIESMLKNLSRIHPVSTMVKGMYGIENEVFLSLPCILNARG 300

Query: 996  ISDVVKVTLTPEEEAHLKKSADTLWGIQKELQ 1091
            ++ V+   L  +E A LKKSADTLW IQK+L+
Sbjct: 301  LTSVINQKLKDDEVAQLKKSADTLWDIQKDLK 332


>ref|XP_538125.1| PREDICTED: similar to L-lactate dehydrogenase B chain (LDH-B) (LDH
            heart subunit) (LDH-H) isoform 1 [Canis familiaris].
          Length = 334

 Score =  486 bits (1252), Expect = e-137
 Identities = 238/332 (71%), Positives = 280/332 (84%), Gaps = 1/332 (0%)
 Frame = +3

Query: 99   MATLKDQLIHNLLKEEH-VPHNKITXXXXXXXXXXXXISILMKELADEIALVDVMEDKLK 275
            MATLK++LI  + +EE  +P+NKIT            ISIL K LADE+ALVDV+EDKLK
Sbjct: 1    MATLKEKLIAPVAEEEAAIPNNKITVVGVGQVGMACAISILGKSLADELALVDVLEDKLK 60

Query: 276  GEMMDLQHGSLFLRTPKIVSGKDYNVTANSRLVVITAGARQQEGESRLNLVQRNVNIFKF 455
            GEMMDLQHGSLFL+TPKI + KDY+VTANS++VV+TAG RQQEGES LNLVQRNVN+FKF
Sbjct: 61   GEMMDLQHGSLFLQTPKIAADKDYSVTANSKIVVVTAGVRQQEGESCLNLVQRNVNVFKF 120

Query: 456  IIPNIVKYSPNCKLLVVSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLG 635
            IIP IVKYSP+C ++VVSNPVDILTYV WK+SG PK RVIGSGCNLDSARFRYLM E+LG
Sbjct: 121  IIPQIVKYSPDCIIIVVSNPVDILTYVTWKLSGLPKRRVIGSGCNLDSARFRYLMAEKLG 180

Query: 636  VHPLSCHGWILGEHGDSSVPVWSGVNVAGVSLKNLHPELGTDADKEHWKAVHKQVVDSAY 815
            +HP SCHGWILGEHGDSSV VWSGVNVAGVSL+ L+PE+GTD + E+WK VHK VV SAY
Sbjct: 181  IHPSSCHGWILGEHGDSSVAVWSGVNVAGVSLQELNPEMGTDNNSENWKEVHKMVVKSAY 240

Query: 816  EVIKLKGYTSWAIGLSVADLAESIMKNLRRVHPISTMIKGLYGIKEDVFLSVPCILGQNG 995
            EVIKLKGYT+WAIGLSVADL ES++KNL R+HP+STM+KG+YGI+ +VFLS+PCIL   G
Sbjct: 241  EVIKLKGYTNWAIGLSVADLIESMLKNLSRIHPVSTMVKGMYGIENEVFLSLPCILNTRG 300

Query: 996  ISDVVKVTLTPEEEAHLKKSADTLWGIQKELQ 1091
            ++ V+   L  +E A LKKSADTLW IQK+L+
Sbjct: 301  LTSVINQKLKDDEVAQLKKSADTLWDIQKDLK 332


>ref|XP_541165.1| PREDICTED: similar to lactate dehydrogenase A-like 6B isoform 1
            [Canis familiaris].
          Length = 375

 Score =  485 bits (1248), Expect = e-137
 Identities = 238/359 (66%), Positives = 291/359 (81%), Gaps = 5/359 (1%)
 Frame = +3

Query: 27   RIRHCAPPTPARSALPIPFGS-----KSTMATLKDQLIHNLLKEEHVPHNKITXXXXXXX 191
            R+    P  PA  +   P G+      S MAT++ +L+ NL  EE V HNK++       
Sbjct: 18   RVNRLCPQRPAGLS---PAGAWAVVPASNMATVRGELLKNLTSEEVVHHNKVSIIGTGSV 74

Query: 192  XXXXXISILMKELADEIALVDVMEDKLKGEMMDLQHGSLFLRTPKIVSGKDYNVTANSRL 371
                 ISIL++ L DE+ALVDV EDKLK EMMDLQHGS F++ P IVS +DY VTANS L
Sbjct: 75   GMACAISILLRGLTDELALVDVNEDKLKAEMMDLQHGSPFVKMPTIVSSRDYLVTANSSL 134

Query: 372  VVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKYSPNCKLLVVSNPVDILTYVAWKIS 551
            VVITAGARQ++GE+RLNLVQRNV IFK II NIV+YSP+CKL+VVSNPVD+LTYVAWK+S
Sbjct: 135  VVITAGARQEKGETRLNLVQRNVAIFKLIISNIVQYSPHCKLIVVSNPVDVLTYVAWKLS 194

Query: 552  GFPKNRVIGSGCNLDSARFRYLMGERLGVHPLSCHGWILGEHGDSSVPVWSGVNVAGVSL 731
             FP+NR+IGSGCNLD+ARFR+L+G++LG+H  SCHGW+LGEHGD+SVPVWSGVN+AGV L
Sbjct: 195  EFPQNRIIGSGCNLDTARFRFLIGQKLGIHSDSCHGWVLGEHGDTSVPVWSGVNIAGVPL 254

Query: 732  KNLHPELGTDADKEHWKAVHKQVVDSAYEVIKLKGYTSWAIGLSVADLAESIMKNLRRVH 911
            K+L+ ++GT+ D E WK VHK V+ SAYE+IK+KGYTSWAIGLSVADL ESI+KNLRRVH
Sbjct: 255  KDLNSDIGTEKDPEQWKNVHKDVIASAYEIIKMKGYTSWAIGLSVADLTESILKNLRRVH 314

Query: 912  PISTMIKGLYGIKEDVFLSVPCILGQNGISDVVKVTLTPEEEAHLKKSADTLWGIQKEL 1088
            P+ST+IKGLY I E+VFLSVPC+LG+NGI+D++K+ LTPEE+A LKKSA TLW IQKEL
Sbjct: 315  PVSTIIKGLYEINEEVFLSVPCVLGENGIADLIKIKLTPEEQARLKKSAKTLWEIQKEL 373


>ref|XP_532332.1| PREDICTED: similar to L-lactate dehydrogenase B chain (LDH-B) (LDH
            heart subunit) (LDH-H) isoform 1 [Canis familiaris].
          Length = 334

 Score =  480 bits (1236), Expect = e-135
 Identities = 238/332 (71%), Positives = 280/332 (84%), Gaps = 1/332 (0%)
 Frame = +3

Query: 99   MATLKDQLIHNLLKEEH-VPHNKITXXXXXXXXXXXXISILMKELADEIALVDVMEDKLK 275
            MATLK++LI  + +EE  +P+NKIT            ISIL K LADE+ALVDV+EDKLK
Sbjct: 1    MATLKEKLIAPVAEEEAAIPNNKITVVGVGQVGVACAISILGKSLADELALVDVLEDKLK 60

Query: 276  GEMMDLQHGSLFLRTPKIVSGKDYNVTANSRLVVITAGARQQEGESRLNLVQRNVNIFKF 455
            GEMMDLQ GSLFL+TPKIV+ KDY+VTANS++VV+TAG RQQEGES LNLVQRNVN+FKF
Sbjct: 61   GEMMDLQDGSLFLQTPKIVADKDYSVTANSKIVVVTAGVRQQEGESCLNLVQRNVNVFKF 120

Query: 456  IIPNIVKYSPNCKLLVVSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLG 635
            IIP IVKYSP+C ++VVSNPVDILTYV WK+SG PK+RVIGSGCNLDSARFRYLM E+LG
Sbjct: 121  IIPQIVKYSPDCIIIVVSNPVDILTYVTWKLSGLPKHRVIGSGCNLDSARFRYLMVEKLG 180

Query: 636  VHPLSCHGWILGEHGDSSVPVWSGVNVAGVSLKNLHPELGTDADKEHWKAVHKQVVDSAY 815
            +HP SCHGWILGEHGDSSV VWSGVNVAGVSL+ L+PE+GTD D E+WK VHK VV+SAY
Sbjct: 181  IHPRSCHGWILGEHGDSSVVVWSGVNVAGVSLQELNPEMGTDNDSENWKEVHKMVVESAY 240

Query: 816  EVIKLKGYTSWAIGLSVADLAESIMKNLRRVHPISTMIKGLYGIKEDVFLSVPCILGQNG 995
            EVIKLKGYTSWAIGLSVADL  S++KNL R+HP+STM+KG+ GI+ +VFLS+PCIL   G
Sbjct: 241  EVIKLKGYTSWAIGLSVADLIASMLKNLSRIHPVSTMVKGMCGIENEVFLSLPCILNTWG 300

Query: 996  ISDVVKVTLTPEEEAHLKKSADTLWGIQKELQ 1091
            ++ V+   L  +E A LKKSADTLW IQK+L+
Sbjct: 301  LTSVINQKLKDDEVAQLKKSADTLWDIQKDLK 332


>ref|XP_535075.1| PREDICTED: similar to L-lactate dehydrogenase B chain (LDH-B) (LDH
            heart subunit) (LDH-H) isoform 1 [Canis familiaris].
          Length = 329

 Score =  470 bits (1209), Expect = e-132
 Identities = 230/331 (69%), Positives = 274/331 (82%)
 Frame = +3

Query: 99   MATLKDQLIHNLLKEEHVPHNKITXXXXXXXXXXXXISILMKELADEIALVDVMEDKLKG 278
            MATLK++LI  + +E  +P+NKIT            ISIL K LADE+ALVDV+EDKLKG
Sbjct: 1    MATLKEKLIAPVAEEAAIPNNKITIVGVGQVGMACAISILGKSLADELALVDVLEDKLKG 60

Query: 279  EMMDLQHGSLFLRTPKIVSGKDYNVTANSRLVVITAGARQQEGESRLNLVQRNVNIFKFI 458
            EMMDLQHG LFL+TPKIV+  DY+VTANS+++V+TAG RQQEG+S LNLVQRNVN+FKFI
Sbjct: 61   EMMDLQHGCLFLQTPKIVADNDYSVTANSKIMVVTAGVRQQEGKSHLNLVQRNVNVFKFI 120

Query: 459  IPNIVKYSPNCKLLVVSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGV 638
            IP IVKYSP+C ++VVSNPVDILTYV WK+SG PK+RVIGSGCNLDSARF YLM E+L +
Sbjct: 121  IPQIVKYSPDCIIIVVSNPVDILTYVTWKLSGLPKHRVIGSGCNLDSARFHYLMAEKLRI 180

Query: 639  HPLSCHGWILGEHGDSSVPVWSGVNVAGVSLKNLHPELGTDADKEHWKAVHKQVVDSAYE 818
            HP SCHGWILGEHGDSSV VWSGVNVAGVSL+ L+PE+GTD D E+W    K+VV+SAYE
Sbjct: 181  HPSSCHGWILGEHGDSSVAVWSGVNVAGVSLQELNPEMGTDNDSENW----KEVVESAYE 236

Query: 819  VIKLKGYTSWAIGLSVADLAESIMKNLRRVHPISTMIKGLYGIKEDVFLSVPCILGQNGI 998
            VIKLK YT+WAIGLSVADL ES++KNL R+HP+STM+KG+YGIK +VFLS+PCIL   G+
Sbjct: 237  VIKLKEYTNWAIGLSVADLIESMLKNLSRIHPVSTMVKGMYGIKSEVFLSLPCILNARGL 296

Query: 999  SDVVKVTLTPEEEAHLKKSADTLWGIQKELQ 1091
            + V+   L   E A LKKSADTLW IQK+L+
Sbjct: 297  TSVINQKLKDNEVAQLKKSADTLWDIQKDLK 327


  Database: RefSeq49_CP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,874,504
  Number of sequences in database:  33,336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 62,286,282
Number of extensions: 1624149
Number of successful extensions: 4387
Number of sequences better than 1.0e-05: 43
Number of HSP's gapped: 4368
Number of HSP's successfully gapped: 52
Length of query: 519
Length of database: 18,874,504
Length adjustment: 107
Effective length of query: 412
Effective length of database: 15,307,552
Effective search space: 6306711424
Effective search space used: 6306711424
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-006999
         (1559 letters)

Database: RefSeq49_HP.fasta 
           32,964 sequences; 18,297,164 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001158886.1| L-lactate dehydrogenase A chain isoform 3 [H...   613   e-175
Alignment   gi|NP_005557.1| L-lactate dehydrogenase A chain isoform 1 [Homo...   599   e-171
Alignment   gi|NP_059144.1| L-lactate dehydrogenase C chain [Homo sapiens].      499   e-141
Alignment   gi|NP_002292.1| L-lactate dehydrogenase C chain [Homo sapiens].      499   e-141
Alignment   gi|NP_001167568.1| L-lactate dehydrogenase B chain [Homo sapien...   495   e-140
Alignment   gi|NP_002291.1| L-lactate dehydrogenase B chain [Homo sapiens].      495   e-140
Alignment   gi|NP_001137543.1| L-lactate dehydrogenase A-like 6A [Homo sapi...   484   e-136
Alignment   gi|NP_659409.2| L-lactate dehydrogenase A-like 6A [Homo sapiens].    484   e-136
Alignment   gi|NP_149972.1| L-lactate dehydrogenase A-like 6B [Homo sapiens].    482   e-136
Alignment   gi|NP_001128711.1| L-lactate dehydrogenase A chain isoform 2 [H...   429   e-120

>ref|NP_001158886.1| L-lactate dehydrogenase A chain isoform 3 [Homo sapiens].
          Length = 361

 Score =  613 bits (1581), Expect = e-175
 Identities = 303/340 (89%), Positives = 318/340 (93%)
 Frame = +3

Query: 75   IPFGSKSTMATLKDQLIHNLLKEEHVPHNKITXXXXXXXXXXXXISILMKELADEIALVD 254
            IPFGSKS MATLKDQLI+NLLKEE  P NKIT            ISILMK+LADE+ALVD
Sbjct: 22   IPFGSKSNMATLKDQLIYNLLKEEQTPQNKITVVGVGAVGMACAISILMKDLADELALVD 81

Query: 255  VMEDKLKGEMMDLQHGSLFLRTPKIVSGKDYNVTANSRLVVITAGARQQEGESRLNLVQR 434
            V+EDKLKGEMMDLQHGSLFLRTPKIVSGKDYNVTANS+LV+ITAGARQQEGESRLNLVQR
Sbjct: 82   VIEDKLKGEMMDLQHGSLFLRTPKIVSGKDYNVTANSKLVIITAGARQQEGESRLNLVQR 141

Query: 435  NVNIFKFIIPNIVKYSPNCKLLVVSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRY 614
            NVNIFKFIIPN+VKYSPNCKLL+VSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRY
Sbjct: 142  NVNIFKFIIPNVVKYSPNCKLLIVSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRY 201

Query: 615  LMGERLGVHPLSCHGWILGEHGDSSVPVWSGVNVAGVSLKNLHPELGTDADKEHWKAVHK 794
            LMGERLGVHPLSCHGW+LGEHGDSSVPVWSG+NVAGVSLK LHP+LGTD DKE WK VHK
Sbjct: 202  LMGERLGVHPLSCHGWVLGEHGDSSVPVWSGMNVAGVSLKTLHPDLGTDKDKEQWKEVHK 261

Query: 795  QVVDSAYEVIKLKGYTSWAIGLSVADLAESIMKNLRRVHPISTMIKGLYGIKEDVFLSVP 974
            QVV+SAYEVIKLKGYTSWAIGLSVADLAESIMKNLRRVHP+STMIKGLYGIK+DVFLSVP
Sbjct: 262  QVVESAYEVIKLKGYTSWAIGLSVADLAESIMKNLRRVHPVSTMIKGLYGIKDDVFLSVP 321

Query: 975  CILGQNGISDVVKVTLTPEEEAHLKKSADTLWGIQKELQF 1094
            CILGQNGISD+VKVTLT EEEA LKKSADTLWGIQKELQF
Sbjct: 322  CILGQNGISDLVKVTLTSEEEARLKKSADTLWGIQKELQF 361


>ref|NP_005557.1| L-lactate dehydrogenase A chain isoform 1 [Homo sapiens].
          Length = 332

 Score =  599 bits (1545), Expect = e-171
 Identities = 296/332 (89%), Positives = 311/332 (93%)
 Frame = +3

Query: 99   MATLKDQLIHNLLKEEHVPHNKITXXXXXXXXXXXXISILMKELADEIALVDVMEDKLKG 278
            MATLKDQLI+NLLKEE  P NKIT            ISILMK+LADE+ALVDV+EDKLKG
Sbjct: 1    MATLKDQLIYNLLKEEQTPQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKG 60

Query: 279  EMMDLQHGSLFLRTPKIVSGKDYNVTANSRLVVITAGARQQEGESRLNLVQRNVNIFKFI 458
            EMMDLQHGSLFLRTPKIVSGKDYNVTANS+LV+ITAGARQQEGESRLNLVQRNVNIFKFI
Sbjct: 61   EMMDLQHGSLFLRTPKIVSGKDYNVTANSKLVIITAGARQQEGESRLNLVQRNVNIFKFI 120

Query: 459  IPNIVKYSPNCKLLVVSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGV 638
            IPN+VKYSPNCKLL+VSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGV
Sbjct: 121  IPNVVKYSPNCKLLIVSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGV 180

Query: 639  HPLSCHGWILGEHGDSSVPVWSGVNVAGVSLKNLHPELGTDADKEHWKAVHKQVVDSAYE 818
            HPLSCHGW+LGEHGDSSVPVWSG+NVAGVSLK LHP+LGTD DKE WK VHKQVV+SAYE
Sbjct: 181  HPLSCHGWVLGEHGDSSVPVWSGMNVAGVSLKTLHPDLGTDKDKEQWKEVHKQVVESAYE 240

Query: 819  VIKLKGYTSWAIGLSVADLAESIMKNLRRVHPISTMIKGLYGIKEDVFLSVPCILGQNGI 998
            VIKLKGYTSWAIGLSVADLAESIMKNLRRVHP+STMIKGLYGIK+DVFLSVPCILGQNGI
Sbjct: 241  VIKLKGYTSWAIGLSVADLAESIMKNLRRVHPVSTMIKGLYGIKDDVFLSVPCILGQNGI 300

Query: 999  SDVVKVTLTPEEEAHLKKSADTLWGIQKELQF 1094
            SD+VKVTLT EEEA LKKSADTLWGIQKELQF
Sbjct: 301  SDLVKVTLTSEEEARLKKSADTLWGIQKELQF 332


>ref|NP_059144.1| L-lactate dehydrogenase C chain [Homo sapiens].
          Length = 332

 Score =  499 bits (1286), Expect = e-141
 Identities = 241/332 (72%), Positives = 282/332 (84%)
 Frame = +3

Query: 99   MATLKDQLIHNLLKEEHVPHNKITXXXXXXXXXXXXISILMKELADEIALVDVMEDKLKG 278
            M+T+K+QLI  L++++     KIT            ISIL+K+LADE+ALVDV  DKLKG
Sbjct: 1    MSTVKEQLIEKLIEDDENSQCKITIVGTGAVGMACAISILLKDLADELALVDVALDKLKG 60

Query: 279  EMMDLQHGSLFLRTPKIVSGKDYNVTANSRLVVITAGARQQEGESRLNLVQRNVNIFKFI 458
            EMMDLQHGSLF  T KI SGKDY+V+ANSR+V++TAGARQQEGE+RL LVQRNV I K I
Sbjct: 61   EMMDLQHGSLFFSTSKITSGKDYSVSANSRIVIVTAGARQQEGETRLALVQRNVAIMKSI 120

Query: 459  IPNIVKYSPNCKLLVVSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGV 638
            IP IV YSP+CK+LVVSNPVDILTY+ WKISG P  RVIGSGCNLDSARFRYL+GE+LGV
Sbjct: 121  IPAIVHYSPDCKILVVSNPVDILTYIVWKISGLPVTRVIGSGCNLDSARFRYLIGEKLGV 180

Query: 639  HPLSCHGWILGEHGDSSVPVWSGVNVAGVSLKNLHPELGTDADKEHWKAVHKQVVDSAYE 818
            HP SCHGWI+GEHGDSSVP+WSGVNVAGV+LK L P+LGTD+DKEHWK +HKQV+ SAYE
Sbjct: 181  HPTSCHGWIIGEHGDSSVPLWSGVNVAGVALKTLDPKLGTDSDKEHWKNIHKQVIQSAYE 240

Query: 819  VIKLKGYTSWAIGLSVADLAESIMKNLRRVHPISTMIKGLYGIKEDVFLSVPCILGQNGI 998
            +IKLKGYTSWAIGLSV DL  SI+KNLRRVHP+STM+KGLYGIKE++FLS+PC+LG+NG+
Sbjct: 241  IIKLKGYTSWAIGLSVMDLVGSILKNLRRVHPVSTMVKGLYGIKEELFLSIPCVLGRNGV 300

Query: 999  SDVVKVTLTPEEEAHLKKSADTLWGIQKELQF 1094
            SDVVK+ L  EEEA  KKSA+TLW IQK+L F
Sbjct: 301  SDVVKINLNSEEEALFKKSAETLWNIQKDLIF 332


>ref|NP_002292.1| L-lactate dehydrogenase C chain [Homo sapiens].
          Length = 332

 Score =  499 bits (1286), Expect = e-141
 Identities = 241/332 (72%), Positives = 282/332 (84%)
 Frame = +3

Query: 99   MATLKDQLIHNLLKEEHVPHNKITXXXXXXXXXXXXISILMKELADEIALVDVMEDKLKG 278
            M+T+K+QLI  L++++     KIT            ISIL+K+LADE+ALVDV  DKLKG
Sbjct: 1    MSTVKEQLIEKLIEDDENSQCKITIVGTGAVGMACAISILLKDLADELALVDVALDKLKG 60

Query: 279  EMMDLQHGSLFLRTPKIVSGKDYNVTANSRLVVITAGARQQEGESRLNLVQRNVNIFKFI 458
            EMMDLQHGSLF  T KI SGKDY+V+ANSR+V++TAGARQQEGE+RL LVQRNV I K I
Sbjct: 61   EMMDLQHGSLFFSTSKITSGKDYSVSANSRIVIVTAGARQQEGETRLALVQRNVAIMKSI 120

Query: 459  IPNIVKYSPNCKLLVVSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGV 638
            IP IV YSP+CK+LVVSNPVDILTY+ WKISG P  RVIGSGCNLDSARFRYL+GE+LGV
Sbjct: 121  IPAIVHYSPDCKILVVSNPVDILTYIVWKISGLPVTRVIGSGCNLDSARFRYLIGEKLGV 180

Query: 639  HPLSCHGWILGEHGDSSVPVWSGVNVAGVSLKNLHPELGTDADKEHWKAVHKQVVDSAYE 818
            HP SCHGWI+GEHGDSSVP+WSGVNVAGV+LK L P+LGTD+DKEHWK +HKQV+ SAYE
Sbjct: 181  HPTSCHGWIIGEHGDSSVPLWSGVNVAGVALKTLDPKLGTDSDKEHWKNIHKQVIQSAYE 240

Query: 819  VIKLKGYTSWAIGLSVADLAESIMKNLRRVHPISTMIKGLYGIKEDVFLSVPCILGQNGI 998
            +IKLKGYTSWAIGLSV DL  SI+KNLRRVHP+STM+KGLYGIKE++FLS+PC+LG+NG+
Sbjct: 241  IIKLKGYTSWAIGLSVMDLVGSILKNLRRVHPVSTMVKGLYGIKEELFLSIPCVLGRNGV 300

Query: 999  SDVVKVTLTPEEEAHLKKSADTLWGIQKELQF 1094
            SDVVK+ L  EEEA  KKSA+TLW IQK+L F
Sbjct: 301  SDVVKINLNSEEEALFKKSAETLWNIQKDLIF 332


>ref|NP_001167568.1| L-lactate dehydrogenase B chain [Homo sapiens].
          Length = 334

 Score =  495 bits (1274), Expect = e-140
 Identities = 242/332 (72%), Positives = 284/332 (85%), Gaps = 1/332 (0%)
 Frame = +3

Query: 99   MATLKDQLIHNLLKEEH-VPHNKITXXXXXXXXXXXXISILMKELADEIALVDVMEDKLK 275
            MATLK++LI  + +EE  VP+NKIT            ISIL K LADE+ALVDV+EDKLK
Sbjct: 1    MATLKEKLIAPVAEEEATVPNNKITVVGVGQVGMACAISILGKSLADELALVDVLEDKLK 60

Query: 276  GEMMDLQHGSLFLRTPKIVSGKDYNVTANSRLVVITAGARQQEGESRLNLVQRNVNIFKF 455
            GEMMDLQHGSLFL+TPKIV+ KDY+VTANS++VV+TAG RQQEGESRLNLVQRNVN+FKF
Sbjct: 61   GEMMDLQHGSLFLQTPKIVADKDYSVTANSKIVVVTAGVRQQEGESRLNLVQRNVNVFKF 120

Query: 456  IIPNIVKYSPNCKLLVVSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLG 635
            IIP IVKYSP+C ++VVSNPVDILTYV WK+SG PK+RVIGSGCNLDSARFRYLM E+LG
Sbjct: 121  IIPQIVKYSPDCIIIVVSNPVDILTYVTWKLSGLPKHRVIGSGCNLDSARFRYLMAEKLG 180

Query: 636  VHPLSCHGWILGEHGDSSVPVWSGVNVAGVSLKNLHPELGTDADKEHWKAVHKQVVDSAY 815
            +HP SCHGWILGEHGDSSV VWSGVNVAGVSL+ L+PE+GTD D E+WK VHK VV+SAY
Sbjct: 181  IHPSSCHGWILGEHGDSSVAVWSGVNVAGVSLQELNPEMGTDNDSENWKEVHKMVVESAY 240

Query: 816  EVIKLKGYTSWAIGLSVADLAESIMKNLRRVHPISTMIKGLYGIKEDVFLSVPCILGQNG 995
            EVIKLKGYT+WAIGLSVADL ES++KNL R+HP+STM+KG+YGI+ +VFLS+PCIL   G
Sbjct: 241  EVIKLKGYTNWAIGLSVADLIESMLKNLSRIHPVSTMVKGMYGIENEVFLSLPCILNARG 300

Query: 996  ISDVVKVTLTPEEEAHLKKSADTLWGIQKELQ 1091
            ++ V+   L  +E A LKKSADTLW IQK+L+
Sbjct: 301  LTSVINQKLKDDEVAQLKKSADTLWDIQKDLK 332


>ref|NP_002291.1| L-lactate dehydrogenase B chain [Homo sapiens].
          Length = 334

 Score =  495 bits (1274), Expect = e-140
 Identities = 242/332 (72%), Positives = 284/332 (85%), Gaps = 1/332 (0%)
 Frame = +3

Query: 99   MATLKDQLIHNLLKEEH-VPHNKITXXXXXXXXXXXXISILMKELADEIALVDVMEDKLK 275
            MATLK++LI  + +EE  VP+NKIT            ISIL K LADE+ALVDV+EDKLK
Sbjct: 1    MATLKEKLIAPVAEEEATVPNNKITVVGVGQVGMACAISILGKSLADELALVDVLEDKLK 60

Query: 276  GEMMDLQHGSLFLRTPKIVSGKDYNVTANSRLVVITAGARQQEGESRLNLVQRNVNIFKF 455
            GEMMDLQHGSLFL+TPKIV+ KDY+VTANS++VV+TAG RQQEGESRLNLVQRNVN+FKF
Sbjct: 61   GEMMDLQHGSLFLQTPKIVADKDYSVTANSKIVVVTAGVRQQEGESRLNLVQRNVNVFKF 120

Query: 456  IIPNIVKYSPNCKLLVVSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLG 635
            IIP IVKYSP+C ++VVSNPVDILTYV WK+SG PK+RVIGSGCNLDSARFRYLM E+LG
Sbjct: 121  IIPQIVKYSPDCIIIVVSNPVDILTYVTWKLSGLPKHRVIGSGCNLDSARFRYLMAEKLG 180

Query: 636  VHPLSCHGWILGEHGDSSVPVWSGVNVAGVSLKNLHPELGTDADKEHWKAVHKQVVDSAY 815
            +HP SCHGWILGEHGDSSV VWSGVNVAGVSL+ L+PE+GTD D E+WK VHK VV+SAY
Sbjct: 181  IHPSSCHGWILGEHGDSSVAVWSGVNVAGVSLQELNPEMGTDNDSENWKEVHKMVVESAY 240

Query: 816  EVIKLKGYTSWAIGLSVADLAESIMKNLRRVHPISTMIKGLYGIKEDVFLSVPCILGQNG 995
            EVIKLKGYT+WAIGLSVADL ES++KNL R+HP+STM+KG+YGI+ +VFLS+PCIL   G
Sbjct: 241  EVIKLKGYTNWAIGLSVADLIESMLKNLSRIHPVSTMVKGMYGIENEVFLSLPCILNARG 300

Query: 996  ISDVVKVTLTPEEEAHLKKSADTLWGIQKELQ 1091
            ++ V+   L  +E A LKKSADTLW IQK+L+
Sbjct: 301  LTSVINQKLKDDEVAQLKKSADTLWDIQKDLK 332


>ref|NP_001137543.1| L-lactate dehydrogenase A-like 6A [Homo sapiens].
          Length = 332

 Score =  484 bits (1245), Expect = e-136
 Identities = 233/331 (70%), Positives = 280/331 (84%)
 Frame = +3

Query: 99   MATLKDQLIHNLLKEEHVPHNKITXXXXXXXXXXXXISILMKELADEIALVDVMEDKLKG 278
            MAT+K +LI N  +EE + HNKI+            ISIL+K L+DE+ LVDV E KLKG
Sbjct: 1    MATIKSELIKNFAEEEAIHHNKISIVGTGSVGVACAISILLKGLSDELVLVDVDEGKLKG 60

Query: 279  EMMDLQHGSLFLRTPKIVSGKDYNVTANSRLVVITAGARQQEGESRLNLVQRNVNIFKFI 458
            E MDLQHGS F++ P IVS KDY VTANS LV+ITAGARQ++GE+RL+LVQRNV+IFK +
Sbjct: 61   ETMDLQHGSPFMKMPNIVSSKDYLVTANSNLVIITAGARQKKGETRLDLVQRNVSIFKLM 120

Query: 459  IPNIVKYSPNCKLLVVSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGV 638
            IPNI +YSP+CKLL+V+NPVDILTYVAWK+SGFPKNRVIGSGCNLDSARFRY +G+RLG+
Sbjct: 121  IPNITQYSPHCKLLIVTNPVDILTYVAWKLSGFPKNRVIGSGCNLDSARFRYFIGQRLGI 180

Query: 639  HPLSCHGWILGEHGDSSVPVWSGVNVAGVSLKNLHPELGTDADKEHWKAVHKQVVDSAYE 818
            H  SCHG ILGEHGDSSVPVWSGVN+AGV LK+L+P++GTD D E W+ VHK+V+ S YE
Sbjct: 181  HSESCHGLILGEHGDSSVPVWSGVNIAGVPLKDLNPDIGTDKDPEQWENVHKKVISSGYE 240

Query: 819  VIKLKGYTSWAIGLSVADLAESIMKNLRRVHPISTMIKGLYGIKEDVFLSVPCILGQNGI 998
            ++K+KGYTSW I LSVADL ESI+KNLRRVHP+ST+ KGLYGI ED+FLSVPCILG+NGI
Sbjct: 241  MVKMKGYTSWGISLSVADLTESILKNLRRVHPVSTLSKGLYGINEDIFLSVPCILGENGI 300

Query: 999  SDVVKVTLTPEEEAHLKKSADTLWGIQKELQ 1091
            +D++KV LT EEEA L+KSA+TLW IQKEL+
Sbjct: 301  TDLIKVKLTLEEEACLQKSAETLWEIQKELK 331


>ref|NP_659409.2| L-lactate dehydrogenase A-like 6A [Homo sapiens].
          Length = 332

 Score =  484 bits (1245), Expect = e-136
 Identities = 233/331 (70%), Positives = 280/331 (84%)
 Frame = +3

Query: 99   MATLKDQLIHNLLKEEHVPHNKITXXXXXXXXXXXXISILMKELADEIALVDVMEDKLKG 278
            MAT+K +LI N  +EE + HNKI+            ISIL+K L+DE+ LVDV E KLKG
Sbjct: 1    MATIKSELIKNFAEEEAIHHNKISIVGTGSVGVACAISILLKGLSDELVLVDVDEGKLKG 60

Query: 279  EMMDLQHGSLFLRTPKIVSGKDYNVTANSRLVVITAGARQQEGESRLNLVQRNVNIFKFI 458
            E MDLQHGS F++ P IVS KDY VTANS LV+ITAGARQ++GE+RL+LVQRNV+IFK +
Sbjct: 61   ETMDLQHGSPFMKMPNIVSSKDYLVTANSNLVIITAGARQKKGETRLDLVQRNVSIFKLM 120

Query: 459  IPNIVKYSPNCKLLVVSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGV 638
            IPNI +YSP+CKLL+V+NPVDILTYVAWK+SGFPKNRVIGSGCNLDSARFRY +G+RLG+
Sbjct: 121  IPNITQYSPHCKLLIVTNPVDILTYVAWKLSGFPKNRVIGSGCNLDSARFRYFIGQRLGI 180

Query: 639  HPLSCHGWILGEHGDSSVPVWSGVNVAGVSLKNLHPELGTDADKEHWKAVHKQVVDSAYE 818
            H  SCHG ILGEHGDSSVPVWSGVN+AGV LK+L+P++GTD D E W+ VHK+V+ S YE
Sbjct: 181  HSESCHGLILGEHGDSSVPVWSGVNIAGVPLKDLNPDIGTDKDPEQWENVHKKVISSGYE 240

Query: 819  VIKLKGYTSWAIGLSVADLAESIMKNLRRVHPISTMIKGLYGIKEDVFLSVPCILGQNGI 998
            ++K+KGYTSW I LSVADL ESI+KNLRRVHP+ST+ KGLYGI ED+FLSVPCILG+NGI
Sbjct: 241  MVKMKGYTSWGISLSVADLTESILKNLRRVHPVSTLSKGLYGINEDIFLSVPCILGENGI 300

Query: 999  SDVVKVTLTPEEEAHLKKSADTLWGIQKELQ 1091
            +D++KV LT EEEA L+KSA+TLW IQKEL+
Sbjct: 301  TDLIKVKLTLEEEACLQKSAETLWEIQKELK 331


>ref|NP_149972.1| L-lactate dehydrogenase A-like 6B [Homo sapiens].
          Length = 381

 Score =  482 bits (1240), Expect = e-136
 Identities = 230/337 (68%), Positives = 282/337 (83%)
 Frame = +3

Query: 81   FGSKSTMATLKDQLIHNLLKEEHVPHNKITXXXXXXXXXXXXISILMKELADEIALVDVM 260
            F   S MAT+K +LI     E+ V H+K++            ISIL+K L+DE+ALVD+ 
Sbjct: 44   FTPVSKMATVKSELIERFTSEKPVHHSKVSIIGTGSVGMACAISILLKGLSDELALVDLD 103

Query: 261  EDKLKGEMMDLQHGSLFLRTPKIVSGKDYNVTANSRLVVITAGARQQEGESRLNLVQRNV 440
            EDKLKGE MDLQHGS F + P IV  KDY VTANS LV+ITAGARQ++GE+RLNLVQRNV
Sbjct: 104  EDKLKGETMDLQHGSPFTKMPNIVCSKDYFVTANSNLVIITAGARQEKGETRLNLVQRNV 163

Query: 441  NIFKFIIPNIVKYSPNCKLLVVSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLM 620
             IFK +I +IV+YSP+CKL++VSNPVDILTYVAWK+S FPKNR+IGSGCNLD+ARFR+L+
Sbjct: 164  AIFKLMISSIVQYSPHCKLIIVSNPVDILTYVAWKLSAFPKNRIIGSGCNLDTARFRFLI 223

Query: 621  GERLGVHPLSCHGWILGEHGDSSVPVWSGVNVAGVSLKNLHPELGTDADKEHWKAVHKQV 800
            G++LG+H  SCHGWILGEHGDSSVPVWSGVN+AGV LK+L+ ++GTD D E WK VHK+V
Sbjct: 224  GQKLGIHSESCHGWILGEHGDSSVPVWSGVNIAGVPLKDLNSDIGTDKDPEQWKNVHKEV 283

Query: 801  VDSAYEVIKLKGYTSWAIGLSVADLAESIMKNLRRVHPISTMIKGLYGIKEDVFLSVPCI 980
              +AYE+IK+KGYTSWAIGLSVADL ESI+KNLRR+HP+ST+IKGLYGI E+VFLS+PCI
Sbjct: 284  TATAYEIIKMKGYTSWAIGLSVADLTESILKNLRRIHPVSTIIKGLYGIDEEVFLSIPCI 343

Query: 981  LGQNGISDVVKVTLTPEEEAHLKKSADTLWGIQKELQ 1091
            LG+NGI++++K+ LTPEEEAHLKKSA TLW IQ +L+
Sbjct: 344  LGENGITNLIKIKLTPEEEAHLKKSAKTLWEIQNKLK 380


>ref|NP_001128711.1| L-lactate dehydrogenase A chain isoform 2 [Homo sapiens].
          Length = 274

 Score =  429 bits (1103), Expect = e-120
 Identities = 229/332 (68%), Positives = 244/332 (73%)
 Frame = +3

Query: 99   MATLKDQLIHNLLKEEHVPHNKITXXXXXXXXXXXXISILMKELADEIALVDVMEDKLKG 278
            MATLKDQLI+NLLKEE  P NKIT            ISILMK+LADE+ALVDV+EDKLKG
Sbjct: 1    MATLKDQLIYNLLKEEQTPQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKG 60

Query: 279  EMMDLQHGSLFLRTPKIVSGKDYNVTANSRLVVITAGARQQEGESRLNLVQRNVNIFKFI 458
            EMMDLQHGSLFLRTPKIVSGK                                V+I  ++
Sbjct: 61   EMMDLQHGSLFLRTPKIVSGK--------------------------------VDILTYV 88

Query: 459  IPNIVKYSPNCKLLVVSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGV 638
               I  +  N                          RVIGSGCNLDSARFRYLMGERLGV
Sbjct: 89   AWKISGFPKN--------------------------RVIGSGCNLDSARFRYLMGERLGV 122

Query: 639  HPLSCHGWILGEHGDSSVPVWSGVNVAGVSLKNLHPELGTDADKEHWKAVHKQVVDSAYE 818
            HPLSCHGW+LGEHGDSSVPVWSG+NVAGVSLK LHP+LGTD DKE WK VHKQVV+SAYE
Sbjct: 123  HPLSCHGWVLGEHGDSSVPVWSGMNVAGVSLKTLHPDLGTDKDKEQWKEVHKQVVESAYE 182

Query: 819  VIKLKGYTSWAIGLSVADLAESIMKNLRRVHPISTMIKGLYGIKEDVFLSVPCILGQNGI 998
            VIKLKGYTSWAIGLSVADLAESIMKNLRRVHP+STMIKGLYGIK+DVFLSVPCILGQNGI
Sbjct: 183  VIKLKGYTSWAIGLSVADLAESIMKNLRRVHPVSTMIKGLYGIKDDVFLSVPCILGQNGI 242

Query: 999  SDVVKVTLTPEEEAHLKKSADTLWGIQKELQF 1094
            SD+VKVTLT EEEA LKKSADTLWGIQKELQF
Sbjct: 243  SDLVKVTLTSEEEARLKKSADTLWGIQKELQF 274


  Database: RefSeq49_HP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,297,164
  Number of sequences in database:  32,964
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 61,353,937
Number of extensions: 1620339
Number of successful extensions: 4256
Number of sequences better than 1.0e-05: 14
Number of HSP's gapped: 4250
Number of HSP's successfully gapped: 16
Length of query: 519
Length of database: 18,297,164
Length adjustment: 107
Effective length of query: 412
Effective length of database: 14,770,016
Effective search space: 6085246592
Effective search space used: 6085246592
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-006999
         (1559 letters)

Database: RefSeq49_MP.fasta 
           30,036 sequences; 15,617,559 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001129541.2| L-lactate dehydrogenase A chain isoform 2 [M...   599   e-171
Alignment   gi|NP_034829.1| L-lactate dehydrogenase A chain isoform 1 [Mus ...   595   e-170
Alignment   gi|NP_032518.1| L-lactate dehydrogenase B chain [Mus musculus].      495   e-140
Alignment   gi|XP_904967.1| PREDICTED: l-lactate dehydrogenase B chain-like...   486   e-137
Alignment   gi|NP_038608.1| L-lactate dehydrogenase C chain [Mus musculus].      478   e-135
Alignment   gi|NP_780558.1| L-lactate dehydrogenase A-like 6B [Mus musculus].    461   e-130
Alignment   gi|NP_001035785.1| ubiquitin-conjugating enzyme E2 variant 3 [M...   199   6e-51

>ref|NP_001129541.2| L-lactate dehydrogenase A chain isoform 2 [Mus musculus].
          Length = 361

 Score =  599 bits (1545), Expect = e-171
 Identities = 302/336 (89%), Positives = 312/336 (92%)
 Frame = +3

Query: 87   SKSTMATLKDQLIHNLLKEEHVPHNKITXXXXXXXXXXXXISILMKELADEIALVDVMED 266
            SKS MATLKDQLI NLLKEE  P NKIT            ISILMK+LADE+ALVDVMED
Sbjct: 26   SKSKMATLKDQLIVNLLKEEQAPQNKITVVGVGAVGMACAISILMKDLADELALVDVMED 85

Query: 267  KLKGEMMDLQHGSLFLRTPKIVSGKDYNVTANSRLVVITAGARQQEGESRLNLVQRNVNI 446
            KLKGEMMDLQHGSLFL+TPKIVS KDY VTANS+LV+ITAGARQQEGESRLNLVQRNVNI
Sbjct: 86   KLKGEMMDLQHGSLFLKTPKIVSSKDYCVTANSKLVIITAGARQQEGESRLNLVQRNVNI 145

Query: 447  FKFIIPNIVKYSPNCKLLVVSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGE 626
            FKFIIPNIVKYSP+CKLL+VSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGE
Sbjct: 146  FKFIIPNIVKYSPHCKLLIVSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGE 205

Query: 627  RLGVHPLSCHGWILGEHGDSSVPVWSGVNVAGVSLKNLHPELGTDADKEHWKAVHKQVVD 806
            RLGVH LSCHGW+LGEHGDSSVPVWSGVNVAGVSLK+L+PELGTDADKE WK VHKQVVD
Sbjct: 206  RLGVHALSCHGWVLGEHGDSSVPVWSGVNVAGVSLKSLNPELGTDADKEQWKEVHKQVVD 265

Query: 807  SAYEVIKLKGYTSWAIGLSVADLAESIMKNLRRVHPISTMIKGLYGIKEDVFLSVPCILG 986
            SAYEVIKLKGYTSWAIGLSVADLAESIMKNLRRVHPISTMIKGLYGI EDVFLSVPCILG
Sbjct: 266  SAYEVIKLKGYTSWAIGLSVADLAESIMKNLRRVHPISTMIKGLYGINEDVFLSVPCILG 325

Query: 987  QNGISDVVKVTLTPEEEAHLKKSADTLWGIQKELQF 1094
            QNGISDVVKVTLTPEEEA LKKSADTLWGIQKELQF
Sbjct: 326  QNGISDVVKVTLTPEEEARLKKSADTLWGIQKELQF 361


>ref|NP_034829.1| L-lactate dehydrogenase A chain isoform 1 [Mus musculus].
          Length = 332

 Score =  595 bits (1533), Expect = e-170
 Identities = 299/332 (90%), Positives = 309/332 (93%)
 Frame = +3

Query: 99   MATLKDQLIHNLLKEEHVPHNKITXXXXXXXXXXXXISILMKELADEIALVDVMEDKLKG 278
            MATLKDQLI NLLKEE  P NKIT            ISILMK+LADE+ALVDVMEDKLKG
Sbjct: 1    MATLKDQLIVNLLKEEQAPQNKITVVGVGAVGMACAISILMKDLADELALVDVMEDKLKG 60

Query: 279  EMMDLQHGSLFLRTPKIVSGKDYNVTANSRLVVITAGARQQEGESRLNLVQRNVNIFKFI 458
            EMMDLQHGSLFL+TPKIVS KDY VTANS+LV+ITAGARQQEGESRLNLVQRNVNIFKFI
Sbjct: 61   EMMDLQHGSLFLKTPKIVSSKDYCVTANSKLVIITAGARQQEGESRLNLVQRNVNIFKFI 120

Query: 459  IPNIVKYSPNCKLLVVSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGV 638
            IPNIVKYSP+CKLL+VSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGV
Sbjct: 121  IPNIVKYSPHCKLLIVSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGV 180

Query: 639  HPLSCHGWILGEHGDSSVPVWSGVNVAGVSLKNLHPELGTDADKEHWKAVHKQVVDSAYE 818
            H LSCHGW+LGEHGDSSVPVWSGVNVAGVSLK+L+PELGTDADKE WK VHKQVVDSAYE
Sbjct: 181  HALSCHGWVLGEHGDSSVPVWSGVNVAGVSLKSLNPELGTDADKEQWKEVHKQVVDSAYE 240

Query: 819  VIKLKGYTSWAIGLSVADLAESIMKNLRRVHPISTMIKGLYGIKEDVFLSVPCILGQNGI 998
            VIKLKGYTSWAIGLSVADLAESIMKNLRRVHPISTMIKGLYGI EDVFLSVPCILGQNGI
Sbjct: 241  VIKLKGYTSWAIGLSVADLAESIMKNLRRVHPISTMIKGLYGINEDVFLSVPCILGQNGI 300

Query: 999  SDVVKVTLTPEEEAHLKKSADTLWGIQKELQF 1094
            SDVVKVTLTPEEEA LKKSADTLWGIQKELQF
Sbjct: 301  SDVVKVTLTPEEEARLKKSADTLWGIQKELQF 332


>ref|NP_032518.1| L-lactate dehydrogenase B chain [Mus musculus].
          Length = 334

 Score =  495 bits (1275), Expect = e-140
 Identities = 241/332 (72%), Positives = 284/332 (85%), Gaps = 1/332 (0%)
 Frame = +3

Query: 99   MATLKDQLIHNLLKEEH-VPHNKITXXXXXXXXXXXXISILMKELADEIALVDVMEDKLK 275
            MATLK++LI ++  +E  VP+NKIT            ISIL K LADE+ALVDV+EDKLK
Sbjct: 1    MATLKEKLIASVADDEAAVPNNKITVVGVGQVGMACAISILGKSLADELALVDVLEDKLK 60

Query: 276  GEMMDLQHGSLFLRTPKIVSGKDYNVTANSRLVVITAGARQQEGESRLNLVQRNVNIFKF 455
            GEMMDLQHGSLFL+TPKIV+ KDY+VTANS++VV+TAG RQQEGESRLNLVQRNVN+FKF
Sbjct: 61   GEMMDLQHGSLFLQTPKIVADKDYSVTANSKIVVVTAGVRQQEGESRLNLVQRNVNVFKF 120

Query: 456  IIPNIVKYSPNCKLLVVSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLG 635
            IIP IVKYSP+C ++VVSNPVDILTYV WK+SG PK+RVIGSGCNLDSARFRYLM E+LG
Sbjct: 121  IIPQIVKYSPDCTIIVVSNPVDILTYVTWKLSGLPKHRVIGSGCNLDSARFRYLMAEKLG 180

Query: 636  VHPLSCHGWILGEHGDSSVPVWSGVNVAGVSLKNLHPELGTDADKEHWKAVHKQVVDSAY 815
            +HP SCHGWILGEHGDSSV VWSGVNVAGVSL+ L+PE+GTD D E+WK VHK VVDSAY
Sbjct: 181  IHPSSCHGWILGEHGDSSVAVWSGVNVAGVSLQELNPEMGTDNDSENWKEVHKMVVDSAY 240

Query: 816  EVIKLKGYTSWAIGLSVADLAESIMKNLRRVHPISTMIKGLYGIKEDVFLSVPCILGQNG 995
            EVIKLKGYT+WAIGLSVADL ES++KNL R+HP+STM+KG+YGI+ +VFLS+PCIL   G
Sbjct: 241  EVIKLKGYTNWAIGLSVADLIESMLKNLSRIHPVSTMVKGMYGIENEVFLSLPCILNARG 300

Query: 996  ISDVVKVTLTPEEEAHLKKSADTLWGIQKELQ 1091
            ++ V+   L  +E A L+KSADTLW IQK+L+
Sbjct: 301  LTSVINQKLKDDEVAQLRKSADTLWDIQKDLK 332


>ref|XP_904967.1| PREDICTED: l-lactate dehydrogenase B chain-like isoform 7 [Mus
            musculus].
          Length = 334

 Score =  486 bits (1251), Expect = e-137
 Identities = 237/332 (71%), Positives = 282/332 (84%), Gaps = 1/332 (0%)
 Frame = +3

Query: 99   MATLKDQLIHNLLKEEH-VPHNKITXXXXXXXXXXXXISILMKELADEIALVDVMEDKLK 275
            MATLK++LI ++ ++E  VP+NKIT            ISIL K LADE+ALVDV+EDKLK
Sbjct: 1    MATLKEKLIASVAEDEAAVPNNKITVVGVGQVGMACAISILGKSLADELALVDVLEDKLK 60

Query: 276  GEMMDLQHGSLFLRTPKIVSGKDYNVTANSRLVVITAGARQQEGESRLNLVQRNVNIFKF 455
             EMMDLQHGSLFL+TPKIV+ KDY+VTANS++VV++AG RQQEGESRLNLVQRNVN+FKF
Sbjct: 61   EEMMDLQHGSLFLQTPKIVADKDYSVTANSKIVVVSAGVRQQEGESRLNLVQRNVNVFKF 120

Query: 456  IIPNIVKYSPNCKLLVVSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLG 635
            IIP IVKYSP+C ++VVSNPVDILTYV WK+ G PK+RVIGSGCNLDSARFRYLM E+LG
Sbjct: 121  IIPQIVKYSPDCTIIVVSNPVDILTYVTWKLRGLPKHRVIGSGCNLDSARFRYLMAEKLG 180

Query: 636  VHPLSCHGWILGEHGDSSVPVWSGVNVAGVSLKNLHPELGTDADKEHWKAVHKQVVDSAY 815
            +HP SCHGWILGEHGDSSV VWSGVNVAGVSL+ L+PE+GTD D E+WK VHK VV SAY
Sbjct: 181  IHPSSCHGWILGEHGDSSVAVWSGVNVAGVSLQELNPEMGTDNDSENWKEVHKMVVVSAY 240

Query: 816  EVIKLKGYTSWAIGLSVADLAESIMKNLRRVHPISTMIKGLYGIKEDVFLSVPCILGQNG 995
            EVIKLKGYT+WAIGLSVADL ES++KNL R+HP+STM+KG+YGI+ +VFLS+PCIL   G
Sbjct: 241  EVIKLKGYTNWAIGLSVADLIESMLKNLSRIHPVSTMVKGMYGIENEVFLSLPCILNARG 300

Query: 996  ISDVVKVTLTPEEEAHLKKSADTLWGIQKELQ 1091
            ++ V+   L  +E A L+KSADTLW IQK+L+
Sbjct: 301  LTSVINQKLKDDEVAQLRKSADTLWDIQKDLK 332


>ref|NP_038608.1| L-lactate dehydrogenase C chain [Mus musculus].
          Length = 332

 Score =  478 bits (1230), Expect = e-135
 Identities = 227/331 (68%), Positives = 279/331 (84%)
 Frame = +3

Query: 99   MATLKDQLIHNLLKEEHVPHNKITXXXXXXXXXXXXISILMKELADEIALVDVMEDKLKG 278
            M+T+K+QLI NL+ E+ +   KIT            ISIL+K LADE+ALVD   +KL+G
Sbjct: 1    MSTVKEQLIQNLVPEDKLSRCKITVVGVGNVGMACAISILLKGLADELALVDADTNKLRG 60

Query: 279  EMMDLQHGSLFLRTPKIVSGKDYNVTANSRLVVITAGARQQEGESRLNLVQRNVNIFKFI 458
            E +DL HGSLFL TPKIV GKDYNV+ANS+LV+ITAGAR   GE+RL+L+QRNV I K I
Sbjct: 61   EALDLLHGSLFLSTPKIVFGKDYNVSANSKLVIITAGARMVSGETRLDLLQRNVAIMKAI 120

Query: 459  IPNIVKYSPNCKLLVVSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGV 638
            +P IV+ SP+CK+++V+NPVDILTYV WKISGFP  RVIGSGCNLDSARFRYL+GE+LGV
Sbjct: 121  VPGIVQNSPDCKIIIVTNPVDILTYVVWKISGFPVGRVIGSGCNLDSARFRYLIGEKLGV 180

Query: 639  HPLSCHGWILGEHGDSSVPVWSGVNVAGVSLKNLHPELGTDADKEHWKAVHKQVVDSAYE 818
            +P SCHGW+LGEHGDSSVP+WSGVNVAGV+LK+L+P +GTD+DKEHWK VHKQVV+  YE
Sbjct: 181  NPTSCHGWVLGEHGDSSVPIWSGVNVAGVTLKSLNPAIGTDSDKEHWKNVHKQVVEGGYE 240

Query: 819  VIKLKGYTSWAIGLSVADLAESIMKNLRRVHPISTMIKGLYGIKEDVFLSVPCILGQNGI 998
            V+ +KGYTSWAIGLSV DLA SI+KNL+RVHP++T++KG +GIKE+VFLS+PC+LGQ+GI
Sbjct: 241  VLNMKGYTSWAIGLSVTDLARSILKNLKRVHPVTTLVKGFHGIKEEVFLSIPCVLGQSGI 300

Query: 999  SDVVKVTLTPEEEAHLKKSADTLWGIQKELQ 1091
            +D VKV +T EEE  LKKSADTLW +QK+LQ
Sbjct: 301  TDFVKVNMTAEEEGLLKKSADTLWNMQKDLQ 331


>ref|NP_780558.1| L-lactate dehydrogenase A-like 6B [Mus musculus].
          Length = 382

 Score =  461 bits (1185), Expect = e-130
 Identities = 213/334 (63%), Positives = 274/334 (82%)
 Frame = +3

Query: 93   STMATLKDQLIHNLLKEEHVPHNKITXXXXXXXXXXXXISILMKELADEIALVDVMEDKL 272
            S+MAT+K +LI ++  EE V HNK++            I I+ K L DE+ALVD  E+K+
Sbjct: 49   SSMATVKGELIQHISSEEPVLHNKVSIVGTGSVGMACAIGIIAKGLTDELALVDNNEEKM 108

Query: 273  KGEMMDLQHGSLFLRTPKIVSGKDYNVTANSRLVVITAGARQQEGESRLNLVQRNVNIFK 452
            KGE MDLQHGS+F++ P IV  KD+ VTANS +V+ITAGARQ++ E+RLNLVQRNV IFK
Sbjct: 109  KGETMDLQHGSVFMKMPNIVCSKDFRVTANSEVVIITAGARQEKNETRLNLVQRNVTIFK 168

Query: 453  FIIPNIVKYSPNCKLLVVSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERL 632
             ++  I+K+SP CK++VVSNPVDILT+V WK+SGFPKNR+IGSGCNLD+ARFRY++G+RL
Sbjct: 169  AMVAEIIKHSPRCKIIVVSNPVDILTFVTWKLSGFPKNRIIGSGCNLDTARFRYMLGQRL 228

Query: 633  GVHPLSCHGWILGEHGDSSVPVWSGVNVAGVSLKNLHPELGTDADKEHWKAVHKQVVDSA 812
            G+H  SCHGW+LGEHGDSSVPVWSGVN+AGV L+ L+  +GT  D E W  VHK+V+ SA
Sbjct: 229  GIHSESCHGWVLGEHGDSSVPVWSGVNIAGVPLRELNSAIGTSKDPEKWGDVHKEVIASA 288

Query: 813  YEVIKLKGYTSWAIGLSVADLAESIMKNLRRVHPISTMIKGLYGIKEDVFLSVPCILGQN 992
            Y +IK+KGYTSWAIGLSV D+AESI+KNLR+ HP++T I+GLYGIKE+VFLSVPCILG++
Sbjct: 289  YNIIKMKGYTSWAIGLSVTDIAESILKNLRKTHPVTTKIQGLYGIKEEVFLSVPCILGES 348

Query: 993  GISDVVKVTLTPEEEAHLKKSADTLWGIQKELQF 1094
            GISD++KV L+P EEA + KSA+T+W IQK+++F
Sbjct: 349  GISDIIKVKLSPTEEAQMVKSAETIWKIQKDIKF 382


>ref|NP_001035785.1| ubiquitin-conjugating enzyme E2 variant 3 [Mus musculus].
          Length = 471

 Score =  199 bits (505), Expect = 6e-51
 Identities = 117/312 (37%), Positives = 183/312 (58%), Gaps = 1/312 (0%)
 Frame = +3

Query: 159  NKITXXXXXXXXXXXXISILMKELADEIALVDVMEDKLKGEMMDLQHGSLFLRTPKIVSG 338
            NKIT            ++I  K +AD++ L+D+ +   +G M DL   +L    P +   
Sbjct: 183  NKITVVGSGDLGIACTLAISAKGIADKLLLLDLSDGMSQGTM-DLDIFNL----PNVEIS 237

Query: 339  KDYNVTANSRLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKYSPNCKLLVVSNPV 518
            KD + +A+S++V+ TA +     ES L+ VQ NV++F+ ++P +  YS +  LLV S PV
Sbjct: 238  KDLSASAHSKVVIFTANSLGGS-ESYLHAVQSNVDMFRALVPALGHYSQHAVLLVASQPV 296

Query: 519  DILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGVHPLSCHGWILGEHGDSSVPV 698
            +I++YV WK+S FP  RV+G GCNLDS R +Y++   L V       W++GE G++ V  
Sbjct: 297  EIMSYVTWKLSTFPATRVVGIGCNLDSQRLQYIITSVLKVQTSGKEVWVVGEQGENKVCS 356

Query: 699  WSGVNVAGVSLKNLHPELGTDADKEHWKAVHKQVVDSAYEVIKLKGYTSWAIGLSVADLA 878
            WSG +  GV    L P            +   Q+   A E++K+KG  SW++GLSVADL 
Sbjct: 357  WSGRD--GV----LSP------------SSQAQLSSRAMELLKVKGQRSWSVGLSVADLV 398

Query: 879  ESIMKNLRRVHPISTMIKGLYGIKEDVFLSVPCILGQNGISDVVKVTLTPEE-EAHLKKS 1055
            ++I+ N R+VH +ST+ KG YG+  +VFLS+PCILG  G+S+V+K     +     L+ S
Sbjct: 399  DTIINNKRKVHSVSTLAKGYYGLDNEVFLSLPCILGTGGVSEVIKTKAGEDTVTGTLQAS 458

Query: 1056 ADTLWGIQKELQ 1091
            A ++  +Q++L+
Sbjct: 459  ASSIHALQQQLE 470


  Database: RefSeq49_MP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 15,617,559
  Number of sequences in database:  30,036
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 52,468,336
Number of extensions: 1384567
Number of successful extensions: 3672
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 3668
Number of HSP's successfully gapped: 7
Length of query: 519
Length of database: 15,617,559
Length adjustment: 106
Effective length of query: 413
Effective length of database: 12,433,743
Effective search space: 5135135859
Effective search space used: 5135135859
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-006999
         (1559 letters)

Database: RefSeq49_SP.fasta 
           24,897 sequences; 11,343,932 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001165834.1| L-lactate dehydrogenase A chain [Sus scrofa].     636   0.0  
Alignment   gi|NP_001182704.1| L-lactate dehydrogenase C chain [Sus scrofa].     504   e-143
Alignment   gi|NP_001106758.1| L-lactate dehydrogenase B chain [Sus scrofa].     492   e-139
Alignment   gi|XP_003353222.1| PREDICTED: l-lactate dehydrogenase A-like 6B...   487   e-138
Alignment   gi|XP_001926443.2| PREDICTED: l-lactate dehydrogenase A-like 6B...   487   e-138
Alignment   gi|XP_003361852.1| PREDICTED: l-lactate dehydrogenase A-like 6B...   468   e-132
Alignment   gi|XP_003355600.1| PREDICTED: l-lactate dehydrogenase B chain-l...   465   e-131
Alignment   gi|XP_003122990.2| PREDICTED: l-lactate dehydrogenase C chain-l...   182   6e-46
Alignment   gi|XP_003353977.1| PREDICTED: ubiquitin-conjugating enzyme E2 v...   130   2e-30
Alignment   gi|XP_003353980.1| PREDICTED: ubiquitin-conjugating enzyme E2 v...    92   1e-18

>ref|NP_001165834.1| L-lactate dehydrogenase A chain [Sus scrofa].
          Length = 332

 Score =  636 bits (1640), Expect = 0.0
 Identities = 319/332 (96%), Positives = 319/332 (96%)
 Frame = +3

Query: 99   MATLKDQLIHNLLKEEHVPHNKITXXXXXXXXXXXXISILMKELADEIALVDVMEDKLKG 278
            MATLKDQLIHNLLKEEHVPHNKIT            ISILMKELADEIALVDVMEDKLKG
Sbjct: 1    MATLKDQLIHNLLKEEHVPHNKITVVGVGAVGMACAISILMKELADEIALVDVMEDKLKG 60

Query: 279  EMMDLQHGSLFLRTPKIVSGKDYNVTANSRLVVITAGARQQEGESRLNLVQRNVNIFKFI 458
            EMMDLQHGSLFLRTPKIVSGKDYNVTANSRLVVITAGARQQEGESRLNLVQRNVNIFKFI
Sbjct: 61   EMMDLQHGSLFLRTPKIVSGKDYNVTANSRLVVITAGARQQEGESRLNLVQRNVNIFKFI 120

Query: 459  IPNIVKYSPNCKLLVVSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGV 638
            IPNIVKYSPNCKLLV SNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGV
Sbjct: 121  IPNIVKYSPNCKLLVASNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGV 180

Query: 639  HPLSCHGWILGEHGDSSVPVWSGVNVAGVSLKNLHPELGTDADKEHWKAVHKQVVDSAYE 818
            HPLSCHGWILGEHGDSSVPVWSGVNVAGVSLKNLHPELGTDADKEHWKAVHKQVVDSAYE
Sbjct: 181  HPLSCHGWILGEHGDSSVPVWSGVNVAGVSLKNLHPELGTDADKEHWKAVHKQVVDSAYE 240

Query: 819  VIKLKGYTSWAIGLSVADLAESIMKNLRRVHPISTMIKGLYGIKEDVFLSVPCILGQNGI 998
            VIKLKGYTSWAIGLSVADLAESIMKNLRRVHPISTMIKGLYGIKEDVFLSVPCILGQNGI
Sbjct: 241  VIKLKGYTSWAIGLSVADLAESIMKNLRRVHPISTMIKGLYGIKEDVFLSVPCILGQNGI 300

Query: 999  SDVVKVTLTPEEEAHLKKSADTLWGIQKELQF 1094
            SDVVKVTLTPEEEAHLKKSADTLWGIQKELQF
Sbjct: 301  SDVVKVTLTPEEEAHLKKSADTLWGIQKELQF 332


>ref|NP_001182704.1| L-lactate dehydrogenase C chain [Sus scrofa].
          Length = 332

 Score =  504 bits (1298), Expect = e-143
 Identities = 239/332 (71%), Positives = 286/332 (86%)
 Frame = +3

Query: 99   MATLKDQLIHNLLKEEHVPHNKITXXXXXXXXXXXXISILMKELADEIALVDVMEDKLKG 278
            M+T+K+QLI NL++E+ V  +KIT            I IL+K+LADE+ALVDV  DKLKG
Sbjct: 1    MSTVKEQLIENLIEEDEVSQSKITIVGTGAVGMACAICILLKDLADELALVDVAVDKLKG 60

Query: 279  EMMDLQHGSLFLRTPKIVSGKDYNVTANSRLVVITAGARQQEGESRLNLVQRNVNIFKFI 458
            E MDLQHGSLF  T KIVSGKDY+V+ANS++V++TAGARQQEGESRL LVQRNVNI K I
Sbjct: 61   ETMDLQHGSLFFNTSKIVSGKDYSVSANSKIVIVTAGARQQEGESRLALVQRNVNIMKSI 120

Query: 459  IPNIVKYSPNCKLLVVSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGV 638
            IP IV++SP+CK+L+VSNPVDILTYVAWK+SG P  RVIGSGCNLDSARFRYL+G++LGV
Sbjct: 121  IPTIVQHSPDCKMLIVSNPVDILTYVAWKLSGLPATRVIGSGCNLDSARFRYLIGKKLGV 180

Query: 639  HPLSCHGWILGEHGDSSVPVWSGVNVAGVSLKNLHPELGTDADKEHWKAVHKQVVDSAYE 818
            HP SCHGWI+GEHGDSSVP+WSGVNVAGV+LK L P+LGTD+DK+ WK +HKQV+ SAYE
Sbjct: 181  HPTSCHGWIIGEHGDSSVPLWSGVNVAGVALKTLDPKLGTDSDKDQWKNIHKQVIGSAYE 240

Query: 819  VIKLKGYTSWAIGLSVADLAESIMKNLRRVHPISTMIKGLYGIKEDVFLSVPCILGQNGI 998
            +IKLKGYTSWAIGLSV DL  SI+KNLRRVHP+STM+KGLYGIKE++FLS+PC+LG+NG+
Sbjct: 241  IIKLKGYTSWAIGLSVTDLVGSILKNLRRVHPVSTMVKGLYGIKEEIFLSIPCVLGRNGV 300

Query: 999  SDVVKVTLTPEEEAHLKKSADTLWGIQKELQF 1094
            SD+VKV L  EEEA  KKSA+TLW +QK+L F
Sbjct: 301  SDIVKVNLNAEEEALFKKSANTLWNVQKDLTF 332


>ref|NP_001106758.1| L-lactate dehydrogenase B chain [Sus scrofa].
          Length = 334

 Score =  492 bits (1267), Expect = e-139
 Identities = 239/332 (71%), Positives = 283/332 (85%), Gaps = 1/332 (0%)
 Frame = +3

Query: 99   MATLKDQLIHNLLKEEH-VPHNKITXXXXXXXXXXXXISILMKELADEIALVDVMEDKLK 275
            MATLK++LI  + +EE  +P+NKIT            ISIL K L DE+ALVDV+EDKLK
Sbjct: 1    MATLKEKLIAPVAEEETTIPNNKITVVGVGQVGMACAISILGKSLTDELALVDVLEDKLK 60

Query: 276  GEMMDLQHGSLFLRTPKIVSGKDYNVTANSRLVVITAGARQQEGESRLNLVQRNVNIFKF 455
            GEMMDLQHGSLFL+TPKIV+ KDY+VTANS++VV+TAG RQQEGESRLNLVQRNVN+FKF
Sbjct: 61   GEMMDLQHGSLFLQTPKIVADKDYSVTANSKIVVVTAGVRQQEGESRLNLVQRNVNVFKF 120

Query: 456  IIPNIVKYSPNCKLLVVSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLG 635
            IIP IVKYSP+C ++VVSNPVDILTYV WK+SG PK+RVIGSGCNLDSARFRYLM E+LG
Sbjct: 121  IIPQIVKYSPDCIIIVVSNPVDILTYVTWKLSGLPKHRVIGSGCNLDSARFRYLMAEKLG 180

Query: 636  VHPLSCHGWILGEHGDSSVPVWSGVNVAGVSLKNLHPELGTDADKEHWKAVHKQVVDSAY 815
            VHP SCHGWILGEHGDSSV VWSGVNVAGVSL+ L+PE+GTD D E+WK VHK VV+SAY
Sbjct: 181  VHPSSCHGWILGEHGDSSVAVWSGVNVAGVSLQELNPEMGTDNDSENWKEVHKMVVESAY 240

Query: 816  EVIKLKGYTSWAIGLSVADLAESIMKNLRRVHPISTMIKGLYGIKEDVFLSVPCILGQNG 995
            EVIKLKGYT+WAIGLSVADL ES++KNL R+HP+STM++G+YGI+ +VFLS+PC+L   G
Sbjct: 241  EVIKLKGYTNWAIGLSVADLIESMLKNLSRIHPVSTMVQGMYGIENEVFLSLPCVLNARG 300

Query: 996  ISDVVKVTLTPEEEAHLKKSADTLWGIQKELQ 1091
            ++ V+   L  +E A LK SADTLWGIQK+L+
Sbjct: 301  LTSVINQKLKDDEVAQLKNSADTLWGIQKDLK 332


>ref|XP_003353222.1| PREDICTED: l-lactate dehydrogenase A-like 6B-like [Sus scrofa].
          Length = 381

 Score =  487 bits (1253), Expect = e-138
 Identities = 241/355 (67%), Positives = 288/355 (81%), Gaps = 4/355 (1%)
 Frame = +3

Query: 42   APPTPARSALPI----PFGSKSTMATLKDQLIHNLLKEEHVPHNKITXXXXXXXXXXXXI 209
            AP     + LP+    P    S M+T++ +L+ N   EE V  NKI+            I
Sbjct: 27   APSARRPAGLPLGDAWPVAPASKMSTVRCELMKNFTSEEVVHSNKISIVGTGSVGMACAI 86

Query: 210  SILMKELADEIALVDVMEDKLKGEMMDLQHGSLFLRTPKIVSGKDYNVTANSRLVVITAG 389
            SIL+K L DE+ALVDV E +LKGE MDLQHGS F++ P IVS KDY +TANS LV+ITAG
Sbjct: 87   SILLKGLTDELALVDVDESRLKGETMDLQHGSPFVKMPNIVSSKDYLITANSNLVIITAG 146

Query: 390  ARQQEGESRLNLVQRNVNIFKFIIPNIVKYSPNCKLLVVSNPVDILTYVAWKISGFPKNR 569
            ARQ++GE+RLNLVQRNV IFK +I +IV+YSP CKL+VVSNPVDILTYVAWK+S FP+NR
Sbjct: 147  ARQEKGETRLNLVQRNVTIFKLMISSIVQYSPRCKLIVVSNPVDILTYVAWKLSEFPQNR 206

Query: 570  VIGSGCNLDSARFRYLMGERLGVHPLSCHGWILGEHGDSSVPVWSGVNVAGVSLKNLHPE 749
            +IGSGCNLD+ARFR+L+G+RLG+H  SCHGWILGEHGDSSVPVWSGVN+AGV LKNL+ +
Sbjct: 207  IIGSGCNLDTARFRFLIGQRLGIHSESCHGWILGEHGDSSVPVWSGVNIAGVPLKNLNLD 266

Query: 750  LGTDADKEHWKAVHKQVVDSAYEVIKLKGYTSWAIGLSVADLAESIMKNLRRVHPISTMI 929
            +GTD D E WK VHK VV SAYE+IK+KGYTSWAIGLSVADL ESI+KNLRRVHP+ST I
Sbjct: 267  IGTDKDPEQWKNVHKDVVASAYEIIKMKGYTSWAIGLSVADLTESILKNLRRVHPVSTRI 326

Query: 930  KGLYGIKEDVFLSVPCILGQNGISDVVKVTLTPEEEAHLKKSADTLWGIQKELQF 1094
            KGLYGI E+VFLSVPCILG++GI+D++KV LTPEEEA+L+KSA TLW IQKEL+F
Sbjct: 327  KGLYGINEEVFLSVPCILGESGITDLIKVKLTPEEEAYLQKSAKTLWEIQKELKF 381


>ref|XP_001926443.2| PREDICTED: l-lactate dehydrogenase A-like 6B-like [Sus scrofa].
          Length = 381

 Score =  487 bits (1253), Expect = e-138
 Identities = 241/355 (67%), Positives = 288/355 (81%), Gaps = 4/355 (1%)
 Frame = +3

Query: 42   APPTPARSALPI----PFGSKSTMATLKDQLIHNLLKEEHVPHNKITXXXXXXXXXXXXI 209
            AP     + LP+    P    S M+T++ +L+ N   EE V  NKI+            I
Sbjct: 27   APSARRPAGLPLGDAWPVAPASKMSTVRCELMKNFTSEEVVHSNKISIVGTGSVGMACAI 86

Query: 210  SILMKELADEIALVDVMEDKLKGEMMDLQHGSLFLRTPKIVSGKDYNVTANSRLVVITAG 389
            SIL+K L DE+ALVDV E +LKGE MDLQHGS F++ P IVS KDY +TANS LV+ITAG
Sbjct: 87   SILLKGLTDELALVDVDESRLKGETMDLQHGSPFVKMPNIVSSKDYLITANSNLVIITAG 146

Query: 390  ARQQEGESRLNLVQRNVNIFKFIIPNIVKYSPNCKLLVVSNPVDILTYVAWKISGFPKNR 569
            ARQ++GE+RLNLVQRNV IFK +I +IV+YSP CKL+VVSNPVDILTYVAWK+S FP+NR
Sbjct: 147  ARQEKGETRLNLVQRNVTIFKLMISSIVQYSPRCKLIVVSNPVDILTYVAWKLSEFPQNR 206

Query: 570  VIGSGCNLDSARFRYLMGERLGVHPLSCHGWILGEHGDSSVPVWSGVNVAGVSLKNLHPE 749
            +IGSGCNLD+ARFR+L+G+RLG+H  SCHGWILGEHGDSSVPVWSGVN+AGV LKNL+ +
Sbjct: 207  IIGSGCNLDTARFRFLIGQRLGIHSESCHGWILGEHGDSSVPVWSGVNIAGVPLKNLNLD 266

Query: 750  LGTDADKEHWKAVHKQVVDSAYEVIKLKGYTSWAIGLSVADLAESIMKNLRRVHPISTMI 929
            +GTD D E WK VHK VV SAYE+IK+KGYTSWAIGLSVADL ESI+KNLRRVHP+ST I
Sbjct: 267  IGTDKDPEQWKNVHKDVVASAYEIIKMKGYTSWAIGLSVADLTESILKNLRRVHPVSTRI 326

Query: 930  KGLYGIKEDVFLSVPCILGQNGISDVVKVTLTPEEEAHLKKSADTLWGIQKELQF 1094
            KGLYGI E+VFLSVPCILG++GI+D++KV LTPEEEA+L+KSA TLW IQKEL+F
Sbjct: 327  KGLYGINEEVFLSVPCILGESGITDLIKVKLTPEEEAYLQKSAKTLWEIQKELKF 381


>ref|XP_003361852.1| PREDICTED: l-lactate dehydrogenase A-like 6B-like, partial [Sus
            scrofa].
          Length = 328

 Score =  468 bits (1203), Expect = e-132
 Identities = 230/328 (70%), Positives = 274/328 (83%), Gaps = 2/328 (0%)
 Frame = +3

Query: 99   MATLKDQLIHNLLKEEHVPHNKITXXXXXXXXXXXXISILMKELADEIALVDVMEDKLKG 278
            M+T++ +L+ N   EE V  NKI+            ISIL+K L DE+ALVDV E +LKG
Sbjct: 1    MSTVRCELMKNFTSEEVVHSNKISIVGTGSVGMACAISILLKGLTDELALVDVDESRLKG 60

Query: 279  EM--MDLQHGSLFLRTPKIVSGKDYNVTANSRLVVITAGARQQEGESRLNLVQRNVNIFK 452
            E   MDLQHGS F++ P IVS KDY +TANS LV+ITAGARQ++GE+RLNLVQRNV IFK
Sbjct: 61   ETXTMDLQHGSPFVKMPNIVSSKDYLITANSNLVIITAGARQEKGETRLNLVQRNVTIFK 120

Query: 453  FIIPNIVKYSPNCKLLVVSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERL 632
             +I +IV+YSP CKL+VVSNPVDILTYVAWK+S FP+NR+IGSGCNLD+ARFR+L+G+RL
Sbjct: 121  LMISSIVQYSPRCKLIVVSNPVDILTYVAWKLSEFPQNRIIGSGCNLDTARFRFLIGQRL 180

Query: 633  GVHPLSCHGWILGEHGDSSVPVWSGVNVAGVSLKNLHPELGTDADKEHWKAVHKQVVDSA 812
            G+H  SCHGWILGEHGDSSVPVWSGVN+AGV LKNL+ ++GTD D E WK VHK VV SA
Sbjct: 181  GIHSESCHGWILGEHGDSSVPVWSGVNIAGVPLKNLNLDIGTDKDPEQWKNVHKDVVASA 240

Query: 813  YEVIKLKGYTSWAIGLSVADLAESIMKNLRRVHPISTMIKGLYGIKEDVFLSVPCILGQN 992
            YE+IK+KGYTSWAIGLSVADL ESI+KNLRRVHP+ST IKGLYGI E+VFLSVPCILG++
Sbjct: 241  YEIIKMKGYTSWAIGLSVADLTESILKNLRRVHPVSTRIKGLYGINEEVFLSVPCILGES 300

Query: 993  GISDVVKVTLTPEEEAHLKKSADTLWGI 1076
            GI+D++KV LTPEEEA+L+KSA TLW I
Sbjct: 301  GITDLIKVKLTPEEEAYLQKSAKTLWEI 328


>ref|XP_003355600.1| PREDICTED: l-lactate dehydrogenase B chain-like [Sus scrofa].
          Length = 428

 Score =  465 bits (1196), Expect = e-131
 Identities = 225/313 (71%), Positives = 268/313 (85%), Gaps = 1/313 (0%)
 Frame = +3

Query: 87   SKSTMATLKDQLIHNLLKEEH-VPHNKITXXXXXXXXXXXXISILMKELADEIALVDVME 263
            ++ TMATLK++LI  + +EE  +P+NKIT            ISIL K L DE+ALVDV+E
Sbjct: 90   NQRTMATLKEKLIAPVAEEETTIPNNKITVVGVGQVGMACAISILGKSLTDELALVDVLE 149

Query: 264  DKLKGEMMDLQHGSLFLRTPKIVSGKDYNVTANSRLVVITAGARQQEGESRLNLVQRNVN 443
            DKLKGEMMDLQHGSLFL+TPKIV+ KDY+VTANS++VV+TAG RQQEGESRLNLVQRNVN
Sbjct: 150  DKLKGEMMDLQHGSLFLQTPKIVADKDYSVTANSKIVVVTAGVRQQEGESRLNLVQRNVN 209

Query: 444  IFKFIIPNIVKYSPNCKLLVVSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMG 623
            +FKFIIP IVKYSP+C ++VVSNPVDILTYV WK+SG PK+RVIGSGCNLDSARFRYLM 
Sbjct: 210  VFKFIIPQIVKYSPDCIIIVVSNPVDILTYVTWKLSGLPKHRVIGSGCNLDSARFRYLMA 269

Query: 624  ERLGVHPLSCHGWILGEHGDSSVPVWSGVNVAGVSLKNLHPELGTDADKEHWKAVHKQVV 803
            E+LGVHP SCHGWILGEHGDSSV VWSGVNVAGVSL+ L+PE+GTD D E+WK VHK VV
Sbjct: 270  EKLGVHPSSCHGWILGEHGDSSVAVWSGVNVAGVSLQELNPEMGTDNDSENWKEVHKMVV 329

Query: 804  DSAYEVIKLKGYTSWAIGLSVADLAESIMKNLRRVHPISTMIKGLYGIKEDVFLSVPCIL 983
            +SAYEVIKLKGYT+WAIGLSVADL ES++KNL R+HP+STM++G+YGI+ +VFLS+PC+L
Sbjct: 330  ESAYEVIKLKGYTNWAIGLSVADLIESMLKNLSRIHPVSTMVQGMYGIENEVFLSLPCVL 389

Query: 984  GQNGISDVVKVTL 1022
               G++ V+   L
Sbjct: 390  NARGLTSVINQKL 402


>ref|XP_003122990.2| PREDICTED: l-lactate dehydrogenase C chain-like [Sus scrofa].
          Length = 262

 Score =  182 bits (461), Expect = 6e-46
 Identities = 92/139 (66%), Positives = 112/139 (80%)
 Frame = +3

Query: 99  MATLKDQLIHNLLKEEHVPHNKITXXXXXXXXXXXXISILMKELADEIALVDVMEDKLKG 278
           M+T+K+QLI NL++E+ V  +KIT            I IL+K+LADE+ALVDV  DKLKG
Sbjct: 1   MSTVKEQLIENLIEEDEVSQSKITIVGTGAVGMACAICILLKDLADELALVDVAVDKLKG 60

Query: 279 EMMDLQHGSLFLRTPKIVSGKDYNVTANSRLVVITAGARQQEGESRLNLVQRNVNIFKFI 458
           E MDLQHGSLF  T KIVSGKDY+V+ANS+LV++TAGARQQEGESRL LVQRNVNI K I
Sbjct: 61  ETMDLQHGSLFFNTSKIVSGKDYSVSANSKLVIVTAGARQQEGESRLALVQRNVNIMKSI 120

Query: 459 IPNIVKYSPNCKLLVVSNP 515
           IP IV++SP+CK+L+VSNP
Sbjct: 121 IPTIVQHSPDCKMLIVSNP 139


>ref|XP_003353977.1| PREDICTED: ubiquitin-conjugating enzyme E2 variant 3-like [Sus
           scrofa].
          Length = 375

 Score =  130 bits (327), Expect = 2e-30
 Identities = 72/193 (37%), Positives = 110/193 (56%)
 Frame = +3

Query: 129 NLLKEEHVPHNKITXXXXXXXXXXXXISILMKELADEIALVDVMEDKLKGEMMDLQHGSL 308
           N   +E+   +KIT            ++I  K +AD + L+D+ E   KG MMDL   +L
Sbjct: 173 NWANQENKTVSKITVVGGGELGIACTLAIAAKGIADRLVLLDLSEGT-KGGMMDLNIFNL 231

Query: 309 FLRTPKIVSGKDYNVTANSRLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKYSPN 488
               P +   KD + +A+S++V+ T  +     +S L++VQ NV++F+ ++P +  YS +
Sbjct: 232 ----PNVEISKDLSASAHSKVVIFTVNSLGSS-QSYLDVVQSNVDMFRALVPALGHYSQH 286

Query: 489 CKLLVVSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGVHPLSCHGWIL 668
             LLV S PV+I+TYV WK+S FP N+VIG GCNLDS R +Y++   L         W++
Sbjct: 287 GVLLVASQPVEIMTYVTWKLSAFPANQVIGIGCNLDSQRLQYIITNILKAQTSGKEVWVI 346

Query: 669 GEHGDSSVPVWSG 707
           GE G+  VP W G
Sbjct: 347 GEQGEDKVPTWGG 359


>ref|XP_003353980.1| PREDICTED: ubiquitin-conjugating enzyme E2 variant 3-like [Sus
            scrofa].
          Length = 189

 Score = 91.7 bits (226), Expect = 1e-18
 Identities = 42/100 (42%), Positives = 71/100 (71%), Gaps = 1/100 (1%)
 Frame = +3

Query: 795  QVVDSAYEVIKLKGYTSWAIGLSVADLAESIMKNLRRVHPISTMIKGLYGIKEDVFLSVP 974
            Q+ + A E++++KG  SW++GLSVADL +SI+ + R+VH +S + KG Y I  +VFLS+P
Sbjct: 89   QLSNRAMELLRVKGQRSWSVGLSVADLVDSIVNDKRKVHSVSILAKGYYDINTEVFLSLP 148

Query: 975  CILGQNGISDVVKVTLTPEEEAH-LKKSADTLWGIQKELQ 1091
            CILG +G+ +V+K  +  +     L+ SA ++ G+Q++L+
Sbjct: 149  CILGTSGVCEVIKTRVKEDRVTEKLQSSASSIHGLQQQLK 188


  Database: RefSeq49_SP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 11,343,932
  Number of sequences in database:  24,897
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 38,453,126
Number of extensions: 1013497
Number of successful extensions: 2917
Number of sequences better than 1.0e-05: 11
Number of HSP's gapped: 2910
Number of HSP's successfully gapped: 11
Length of query: 519
Length of database: 11,343,932
Length adjustment: 103
Effective length of query: 416
Effective length of database: 8,779,541
Effective search space: 3652289056
Effective search space used: 3652289056
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-006999
         (1559 letters)

Database: Sscrofa_10.2.fasta 
           4582 sequences; 2,808,509,378 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Sscrofa_Chr02                                                        1176   0.0  
gb|GL895649.2| Sus scrofa unplaced genomic scaffold ChrUScaf3533      260   2e-66
Sscrofa_Chr01                                                         260   2e-66

>Sscrofa_Chr02 
||          Length = 162569375

 Score = 1176 bits (593), Expect = 0.0
 Identities = 619/629 (98%)
 Strand = Plus / Plus

                                                                            
Query: 931      agggtctctatgggataaaagaggatgtcttccttagtgttccttgcatcttgggacaga 990
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43908713 agggtctctatgggataaaagaggatgtcttccttagtgttccttgcatcttgggacaga 43908772

                                                                            
Query: 991      atggaatctcagatgttgtgaaagtgactctgactcctgaggaagaggctcatttgaaga 1050
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43908773 atggaatctcagatgttgtgaaagtgactctgactcctgaggaagaggctcatttgaaga 43908832

                                                                            
Query: 1051     agagtgcagatacactttgggggatccagaaagagctgcaattttaaagtctctcataac 1110
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43908833 agagtgcagatacactttgggggatccagaaagagctgcaattttaaagtctctcataac 43908892

                                                                            
Query: 1111     ataccactttcactgtctaggctacaacaagattttagttggaggttgtgcatattgttc 1170
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43908893 ataccactttcactgtctaggctacaacaagattttagttggaggttgtgcatattgttc 43908952

                                                                            
Query: 1171     tttttatctgatctgtgactaaagcagtaatgttaagacagcctaggaaaaacagccatt 1230
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43908953 tttttatctgatctgtgactaaagcagtaatgttaagacagcctaggaaaaacagccatt 43909012

                                                                            
Query: 1231     tcctaaagttaggagtggttcataaacccccacagctgtatcctgatgttggatggtact 1290
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43909013 tcctaaagttaggagtggttcataaacccccacagctgtatcctgatgttggatggtact 43909072

                                                                            
Query: 1291     tatcttgtgtagtcctaaattggttcttgtaaaatagttctactttctcaagaggcaccc 1350
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43909073 tatcttgtgtagtcctaaattggttcttgtaaaatagttctactttctcaagaggcaccc 43909132

                                                                            
Query: 1351     gggccagtgttgcagatgctgcagttgcctttcaagccagatatatgtttactctgtgtt 1410
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43909133 gggccagtgttgcagatgctgcagttgcctttcaagccagatatatgtttactctgtgtt 43909192

                                                                            
Query: 1411     atataatatctggttcctttagctaagatgcccagtctaactcttttatctccnnattat 1470
                |||||||||||||||||||||||||||||||||||||||||||||||||||||   | ||
Sbjct: 43909193 atataatatctggttcctttagctaagatgcccagtctaactcttttatctccaattaat 43909252

                                                                            
Query: 1471     cacatcctgngatccnatgtacaaatccagtattgcatgtcttgtgataactattctaaa 1530
                ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43909253 cacatcctgggatccaatgtacaaatccagtattgcatgtcttgtgataactattctaaa 43909312

                                             
Query: 1531     gaaatctattttgtgtactgtatgtatca 1559
                |||   |||||| ||||||||||||||||
Sbjct: 43909313 gaatcttattttatgtactgtatgtatca 43909341



 Score =  349 bits (176), Expect = 3e-93
 Identities = 176/176 (100%)
 Strand = Plus / Plus

                                                                            
Query: 515      agtggatatcttgacctatgtggcttggaagataagtggctttcccaaaaaccgtgttat 574
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43905330 agtggatatcttgacctatgtggcttggaagataagtggctttcccaaaaaccgtgttat 43905389

                                                                            
Query: 575      tggaagtggttgcaatttggattcagcccggttccgttacctaatgggggaaaggctggg 634
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43905390 tggaagtggttgcaatttggattcagcccggttccgttacctaatgggggaaaggctggg 43905449

                                                                        
Query: 635      agttcaccccctaagctgtcatgggtggatccttggggagcatggagactctagtg 690
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43905450 agttcaccccctaagctgtcatgggtggatccttggggagcatggagactctagtg 43905505



 Score =  341 bits (172), Expect = 7e-91
 Identities = 175/176 (99%)
 Strand = Plus / Plus

                                                                            
Query: 341      agactataacgtgactgcaaactctaggctggttgttatcacagctggtgcacgtcagca 400
                |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 43904376 agactataacgtgactgcaaactctaggctggttgttatcacagctggggcacgtcagca 43904435

                                                                            
Query: 401      agagggagaaagccgtcttaatttggtccagcgtaatgtgaacatctttaaattcatcat 460
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43904436 agagggagaaagccgtcttaatttggtccagcgtaatgtgaacatctttaaattcatcat 43904495

                                                                        
Query: 461      tcctaatattgtaaaatacagcccaaactgcaagttgcttgttgtttccaatccag 516
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43904496 tcctaatattgtaaaatacagcccaaactgcaagttgcttgttgtttccaatccag 43904551



 Score =  301 bits (152), Expect = 6e-79
 Identities = 152/152 (100%)
 Strand = Plus / Plus

                                                                            
Query: 74       gattccttttggttctaaatccactatggcaactctcaaggatcagctgattcacaatct 133
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43900596 gattccttttggttctaaatccactatggcaactctcaaggatcagctgattcacaatct 43900655

                                                                            
Query: 134      tcttaaggaagagcatgttccccacaataagattacagttgttggggttggtgctgttgg 193
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43900656 tcttaaggaagagcatgttccccacaataagattacagttgttggggttggtgctgttgg 43900715

                                                
Query: 194      catggcttgtgccatcagtatcttaatgaagg 225
                ||||||||||||||||||||||||||||||||
Sbjct: 43900716 catggcttgtgccatcagtatcttaatgaagg 43900747



 Score =  256 bits (129), Expect = 3e-65
 Identities = 129/129 (100%)
 Strand = Plus / Plus

                                                                            
Query: 805      acagtgcttatgaggtgatcaaactgaaaggctacacgtcctgggccattggactatctg 864
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43907758 acagtgcttatgaggtgatcaaactgaaaggctacacgtcctgggccattggactatctg 43907817

                                                                            
Query: 865      tggcagatctggcagaaagtataatgaagaatcttaggcgggtgcatccgatttccacca 924
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43907818 tggcagatctggcagaaagtataatgaagaatcttaggcgggtgcatccgatttccacca 43907877

                         
Query: 925      tgattaagg 933
                |||||||||
Sbjct: 43907878 tgattaagg 43907886



 Score =  238 bits (120), Expect = 8e-60
 Identities = 120/120 (100%)
 Strand = Plus / Plus

                                                                            
Query: 223      aggaattggcggatgaaattgctctcgttgatgtcatggaagacaaactgaagggagaga 282
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43903297 aggaattggcggatgaaattgctctcgttgatgtcatggaagacaaactgaagggagaga 43903356

                                                                            
Query: 283      tgatggatctgcaacatggcagccttttccttaggaccccaaaaattgtctctggcaaag 342
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43903357 tgatggatctgcaacatggcagccttttccttaggaccccaaaaattgtctctggcaaag 43903416



 Score =  228 bits (115), Expect = 7e-57
 Identities = 118/119 (99%)
 Strand = Plus / Plus

                                                                            
Query: 690      gtgcctgtgtggagcggagtaaatgttgctggtgtctccctgaagaatctgcaccctgaa 749
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43906179 gtgcctgtgtggagcggagtaaatgttgctggtgtctccctgaagaatctgcaccctgaa 43906238

                                                                           
Query: 750      ttaggcactgatgcagataaggaacactggaaagcggttcacaaacaggtggtggacag 808
                ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 43906239 ttaggcactgatgcagataaggaacactggaaagcagttcacaaacaggtggtggacag 43906297



 Score =  147 bits (74), Expect = 2e-32
 Identities = 74/74 (100%)
 Strand = Plus / Plus

                                                                            
Query: 1        agtaccggagcagctgccgccaagtccggatccgacactgtgcgcctcccacgcccgccc 60
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43898286 agtaccggagcagctgccgccaagtccggatccgacactgtgcgcctcccacgcccgccc 43898345

                              
Query: 61       gaagtgcactcccg 74
                ||||||||||||||
Sbjct: 43898346 gaagtgcactcccg 43898359



 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 88/105 (83%)
 Strand = Plus / Plus

                                                                            
Query: 515      agtggatatcttgacctatgtggcttggaagataagtggctttcccaaaaaccgtgttat 574
                ||||||||| |||||||| || ||||||||| |||||||||| ||   ||  ||||| ||
Sbjct: 43709921 agtggatattttgacctacgttgcttggaagttaagtggcttacctgcaactcgtgtaat 43709980

                                                             
Query: 575      tggaagtggttgcaatttggattcagcccggttccgttacctaat 619
                |||||||||||| ||| | || || ||||| ||||||||||||||
Sbjct: 43709981 tggaagtggttgtaatctagactctgcccgtttccgttacctaat 43710025



 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 73/87 (83%)
 Strand = Plus / Plus

                                                                            
Query: 379      tcacagctggtgcacgtcagcaagagggagaaagccgtcttaatttggtccagcgtaatg 438
                ||||||| |||||||| ||||| ||||||||||| || |||    |||||||||||||||
Sbjct: 43691980 tcacagcaggtgcacggcagcaggagggagaaagtcgccttgccctggtccagcgtaatg 43692039

                                           
Query: 439      tgaacatctttaaattcatcattccta 465
                |||| ||| | ||||  ||||||||||
Sbjct: 43692040 tgaatatcatgaaatcaatcattccta 43692066


>gb|GL895649.2| Sus scrofa unplaced genomic scaffold ChrUScaf3533
          Length = 59217

 Score =  260 bits (131), Expect = 2e-66
 Identities = 491/611 (80%)
 Strand = Plus / Minus

                                                                        
Query: 376  ttatcacagctggtgcacgtcagcaagagggagaaagccgtcttaatttggtccagcgta 435
            |||||||||| |||||||| ||| || | |||||||  || |||||||| |||||||| |
Sbjct: 1417 ttatcacagcgggtgcacgccaggaaaaaggagaaacacgccttaatttagtccagcgaa 1358

                                                                        
Query: 436  atgtgaacatctttaaattcatcattcctaatattgtaaaatacagcccaaactgcaagt 495
            |||||| |||||||||||| || ||| ||| ||| ||  | ||||||||   ||||||  
Sbjct: 1357 atgtgaccatctttaaattaatgatttctagtatcgttcagtacagccctcgctgcaaac 1298

                                                                        
Query: 496  tgcttgttgtttccaatccagtggatatcttgacctatgtggcttggaagataagtggct 555
            || |||| ||||||||||||||||||||||| || ||||| || |||||| | ||||  |
Sbjct: 1297 tgattgtcgtttccaatccagtggatatcttaacttatgtagcatggaagttgagtgaat 1238

                                                                        
Query: 556  ttcccaaaaaccgtgttattggaagtggttgcaatttggattcagcccggttccgttacc 615
            ||||| |||||||| ||||||| |||||||| ||| ||||  | ||||| ||||||| | 
Sbjct: 1237 ttccccaaaaccgtattattgggagtggttgtaatctggacactgcccgtttccgtttct 1178

                                                                        
Query: 616  taatgggggaaaggctgggagttcaccccctaagctgtcatgggtggatccttggggagc 675
            | || ||| | ||||| ||  | ||| |   |||||||||||||||||||||||| ||||
Sbjct: 1177 tgattgggcagaggcttggtatccactctgaaagctgtcatgggtggatccttggagagc 1118

                                                                        
Query: 676  atggagactctagtgtgcctgtgtggagcggagtaaatgttgctggtgtctccctgaaga 735
            |||||||||| ||||| ||||||||||| ||||| ||  | ||||||||| | |||||||
Sbjct: 1117 atggagactcaagtgttcctgtgtggagtggagtgaacatcgctggtgtccctctgaaga 1058

                                                                        
Query: 736  atctgcaccctgaattaggcactgatgcagataaggaacactggaaagcggttcacaaac 795
            ||||| ||   ||  |||| ||||||  ||||   || || ||||||   ||||||||| 
Sbjct: 1057 atctgaacttagatataggaactgataaagatcctgagcagtggaaaaatgttcacaaag 998

                                                                        
Query: 796  aggtggtggacagtgcttatgaggtgatcaaactgaaaggctacacgtcctgggccattg 855
            | ||||| |  ||||| |||||| | || ||| ||||||| ||||| || ||||||||||
Sbjct: 997  atgtggttgctagtgcctatgagattattaaaatgaaaggttacacttcttgggccattg 938

                                                                        
Query: 856  gactatctgtggcagatctggcagaaagtataatgaagaatcttaggcgggtgcatccga 915
            | ||||| || || ||| |  ||||||||||  |||||||||||||  | ||||||||  
Sbjct: 937  gcctatcagtagctgatttaacagaaagtattttgaagaatcttagaagagtgcatccag 878

                                                                        
Query: 916  tttccaccatgattaagggtctctatgggataaaagaggatgtcttccttagtgttcctt 975
            |||||||||  ||||||||||||||||||||||| || || || ||||| ||||||||||
Sbjct: 877  tttccaccagaattaagggtctctatgggataaatgaagaagtgttcctcagtgttcctt 818

                       
Query: 976  gcatcttggga 986
            | ||| |||||
Sbjct: 817  gtatcctggga 807


>Sscrofa_Chr01 
||          Length = 315321322

 Score =  260 bits (131), Expect = 2e-66
 Identities = 491/611 (80%)
 Strand = Plus / Plus

                                                                            
Query: 376      ttatcacagctggtgcacgtcagcaagagggagaaagccgtcttaatttggtccagcgta 435
                |||||||||| |||||||| ||| || | |||||||  || |||||||| |||||||| |
Sbjct: 11733277 ttatcacagcgggtgcacgccaggaaaaaggagaaacacgccttaatttagtccagcgaa 11733336

                                                                            
Query: 436      atgtgaacatctttaaattcatcattcctaatattgtaaaatacagcccaaactgcaagt 495
                |||||| |||||||||||| || ||| ||| ||| ||  | ||||||||   ||||||  
Sbjct: 11733337 atgtgaccatctttaaattaatgatttctagtatcgttcagtacagccctcgctgcaaac 11733396

                                                                            
Query: 496      tgcttgttgtttccaatccagtggatatcttgacctatgtggcttggaagataagtggct 555
                || |||| ||||||||||||||||||||||| || ||||| || |||||| | ||||  |
Sbjct: 11733397 tgattgtcgtttccaatccagtggatatcttaacttatgtagcatggaagttgagtgaat 11733456

                                                                            
Query: 556      ttcccaaaaaccgtgttattggaagtggttgcaatttggattcagcccggttccgttacc 615
                ||||| |||||||| ||||||| |||||||| ||| ||||  | ||||| ||||||| | 
Sbjct: 11733457 ttccccaaaaccgtattattgggagtggttgtaatctggacactgcccgtttccgtttct 11733516

                                                                            
Query: 616      taatgggggaaaggctgggagttcaccccctaagctgtcatgggtggatccttggggagc 675
                | || ||| | ||||| ||  | ||| |   |||||||||||||||||||||||| ||||
Sbjct: 11733517 tgattgggcagaggcttggtatccactctgaaagctgtcatgggtggatccttggagagc 11733576

                                                                            
Query: 676      atggagactctagtgtgcctgtgtggagcggagtaaatgttgctggtgtctccctgaaga 735
                |||||||||| ||||| ||||||||||| ||||| ||  | ||||||||| | |||||||
Sbjct: 11733577 atggagactcaagtgttcctgtgtggagtggagtgaacatcgctggtgtccctctgaaga 11733636

                                                                            
Query: 736      atctgcaccctgaattaggcactgatgcagataaggaacactggaaagcggttcacaaac 795
                ||||| ||   ||  |||| ||||||  ||||   || || ||||||   ||||||||| 
Sbjct: 11733637 atctgaacttagatataggaactgataaagatcctgagcagtggaaaaatgttcacaaag 11733696

                                                                            
Query: 796      aggtggtggacagtgcttatgaggtgatcaaactgaaaggctacacgtcctgggccattg 855
                | ||||| |  ||||| |||||| | || ||| ||||||| ||||| || ||||||||||
Sbjct: 11733697 atgtggttgctagtgcctatgagattattaaaatgaaaggttacacttcttgggccattg 11733756

                                                                            
Query: 856      gactatctgtggcagatctggcagaaagtataatgaagaatcttaggcgggtgcatccga 915
                | ||||| || || ||| |  ||||||||||  |||||||||||||  | ||||||||  
Sbjct: 11733757 gcctatcagtagctgatttaacagaaagtattttgaagaatcttagaagagtgcatccag 11733816

                                                                            
Query: 916      tttccaccatgattaagggtctctatgggataaaagaggatgtcttccttagtgttcctt 975
                |||||||||  ||||||||||||||||||||||| || || || ||||| ||||||||||
Sbjct: 11733817 tttccaccagaattaagggtctctatgggataaatgaagaagtgttcctcagtgttcctt 11733876

                           
Query: 976      gcatcttggga 986
                | ||| |||||
Sbjct: 11733877 gtatcctggga 11733887


  Database: Sscrofa_10.2.fasta
    Posted date:  Nov 16, 2011 10:34 AM
  Number of letters in database: 2,808,509,378
  Number of sequences in database:  4582
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 48,106,786
Number of extensions: 253
Number of successful extensions: 253
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 250
Number of HSP's successfully gapped: 16
Length of query: 1559
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1538
Effective length of database: 2,808,413,156
Effective search space: 4319339433928
Effective search space used: 4319339433928
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)