Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007013
(996 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_776955.2| cytochrome P450 2E1 [Bos taurus]. 350 1e-96
Alignment gi|NP_001069895.1| cytochrome P450, family 2, subfamily C, poly... 246 2e-65
Alignment gi|NP_001069519.1| cytochrome P450, family 2, subfamily C, poly... 246 2e-65
Alignment gi|XP_002698441.1| PREDICTED: cytochrome P450, family 2, subfam... 243 1e-64
Alignment gi|XP_002703224.1| PREDICTED: cytochrome P450, family 2, subfam... 243 1e-64
Alignment gi|XP_002698440.1| PREDICTED: cytochrome P450, family 2, subfam... 239 2e-63
Alignment gi|XP_002698439.1| PREDICTED: cytochrome P450, family 2, subfam... 239 2e-63
Alignment gi|XP_612374.2| PREDICTED: cytochrome P450, family 2, subfamily... 239 2e-63
Alignment gi|NP_001103262.1| cytochrome P450, family 2, subfamily C, poly... 236 2e-62
Alignment gi|XP_002698442.1| PREDICTED: cytochrome P450 family 2 subfamil... 234 7e-62
>ref|NP_776955.2| cytochrome P450 2E1 [Bos taurus].
Length = 495
Score = 350 bits (898), Expect = 1e-96
Identities = 167/217 (76%), Positives = 184/217 (84%)
Frame = +2
Query: 98 MTALGIXXXXXXXXXXXXXISIWKHIHSSWKLPPGPFPLPIVGNIFQLDLKNIPKSFTML 277
M ALGI ISIWKHI+SSWKLPPGPFPLPI+GN+ QLD+KNIPKSFT L
Sbjct: 1 MAALGITVALLVWMATLLFISIWKHIYSSWKLPPGPFPLPIIGNLLQLDIKNIPKSFTRL 60
Query: 278 AERYGPVFTVYLGSRRIVVLHGYKAVKEVLLHYKNEFSGRGEIPTFQVHKDKGVIFNNGP 457
AERYGPVFT+YLGS+R VV+HGYK VKEVLL YKNEFSGRGE P FQ+HK+ G+IFNNG
Sbjct: 61 AERYGPVFTLYLGSQRAVVVHGYKPVKEVLLDYKNEFSGRGENPGFQMHKNNGIIFNNGS 120
Query: 458 TWRDTRRFSLTTLRDFGMGKQGNEQRIQREAHFLLEALRKTHGQPFDPTFLIGCAPCNVI 637
TWRDTRRFSLTTLRD GMGKQGNEQRIQREAHFLLE LRKT GQPFDPTF++G AP NVI
Sbjct: 121 TWRDTRRFSLTTLRDLGMGKQGNEQRIQREAHFLLEVLRKTQGQPFDPTFVVGFAPYNVI 180
Query: 638 SDILFRQHFDYNDKTCLRLMSMFNENFYLLSTGWIQV 748
SDILF + FDY D+T LRLMS+FNENFYLLS+ WIQ+
Sbjct: 181 SDILFHKRFDYKDQTSLRLMSLFNENFYLLSSPWIQL 217
>ref|NP_001069895.1| cytochrome P450, family 2, subfamily C, polypeptide 87 [Bos
taurus].
Length = 492
Score = 246 bits (629), Expect = 2e-65
Identities = 119/207 (57%), Positives = 148/207 (71%), Gaps = 1/207 (0%)
Frame = +2
Query: 155 ISIWKHIHSSWKLPPGPFPLPIVGNIFQLDLKNIPKSFTMLAERYGPVFTVYLGSRRIVV 334
+S+WK KLPPGP PLPI+GNIFQLD+KNI KS T L++ YGPVFTVY G + VV
Sbjct: 17 LSLWKQSSGKGKLPPGPTPLPILGNIFQLDVKNISKSLTSLSKVYGPVFTVYFGMKPTVV 76
Query: 335 LHGYKAVKEVLLHYKNEFSGRGEIPTFQVH-KDKGVIFNNGPTWRDTRRFSLTTLRDFGM 511
LHGY+AVKE L+ EFS RG P + + K G++F+NG TW++TRRFSL TLR+FGM
Sbjct: 77 LHGYEAVKEALIDLGEEFSRRGSFPVIERNVKGHGIVFSNGKTWKETRRFSLMTLRNFGM 136
Query: 512 GKQGNEQRIQREAHFLLEALRKTHGQPFDPTFLIGCAPCNVISDILFRQHFDYNDKTCLR 691
GK+ E R+Q EA L+E LRKT+G P DPTF++GCAPCNVI I+F+ FDY D+T L
Sbjct: 137 GKRSIEDRVQEEARCLVEELRKTNGLPCDPTFILGCAPCNVICSIIFQNRFDYKDQTFLN 196
Query: 692 LMSMFNENFYLLSTGWIQVKHFPPSCL 772
LM NEN +L + WIQV + P L
Sbjct: 197 LMKTINENIKILGSPWIQVLNIFPVLL 223
>ref|NP_001069519.1| cytochrome P450, family 2, subfamily C, polypeptide 18 [Bos
taurus].
Length = 490
Score = 246 bits (628), Expect = 2e-65
Identities = 118/199 (59%), Positives = 145/199 (72%), Gaps = 1/199 (0%)
Frame = +2
Query: 155 ISIWKHIHSSWKLPPGPFPLPIVGNIFQLDLKNIPKSFTMLAERYGPVFTVYLGSRRIVV 334
+S+WK KLPPGP PLPI+GNI QLD+KNI KS + L+ YGPVFTVY G R VV
Sbjct: 17 LSLWKQSSGKGKLPPGPTPLPILGNILQLDVKNIGKSLSNLSNTYGPVFTVYFGLRPTVV 76
Query: 335 LHGYKAVKEVLLHYKNEFSGRGEIPTFQ-VHKDKGVIFNNGPTWRDTRRFSLTTLRDFGM 511
LHGY+AVKE L+ EFSGRG IP Q V+K G+IF+NG W++ RRFSL TLR+FGM
Sbjct: 77 LHGYEAVKEALIDQGEEFSGRGNIPMSQRVNKGYGIIFSNGKRWKEIRRFSLMTLRNFGM 136
Query: 512 GKQGNEQRIQREAHFLLEALRKTHGQPFDPTFLIGCAPCNVISDILFRQHFDYNDKTCLR 691
GK+ E R+Q EAH L+E LRKT+G P DPTF++GCAPCNVI I+F+ FDY D+ L
Sbjct: 137 GKRSIEDRVQEEAHCLVEELRKTNGSPCDPTFILGCAPCNVICSIIFQNRFDYTDQNFLN 196
Query: 692 LMSMFNENFYLLSTGWIQV 748
L+ FNEN + S+ W+QV
Sbjct: 197 LLDKFNENLQVASSPWMQV 215
>ref|XP_002698441.1| PREDICTED: cytochrome P450, family 2, subfamily C, polypeptide
87-like isoform 3 [Bos taurus].
Length = 431
Score = 243 bits (621), Expect = 1e-64
Identities = 119/201 (59%), Positives = 144/201 (71%), Gaps = 1/201 (0%)
Frame = +2
Query: 155 ISIWKHIHSSWKLPPGPFPLPIVGNIFQLDLKNIPKSFTMLAERYGPVFTVYLGSRRIVV 334
IS+WK KLPPGP PLPI+GNI QLD+K+I KS + L++ YGPVFT+Y G +VV
Sbjct: 17 ISLWKQSSGKGKLPPGPTPLPILGNILQLDVKDISKSVSNLSKVYGPVFTLYFGMNPLVV 76
Query: 335 LHGYKAVKEVLLHYKNEFSGRGEIPTFQ-VHKDKGVIFNNGPTWRDTRRFSLTTLRDFGM 511
LHGY+AVKE L+ EFSGRG P Q K GVIF+NG W++TRRFSL TLRDFGM
Sbjct: 77 LHGYEAVKEALIGLGEEFSGRGSCPVIQRASKGYGVIFSNGKIWKETRRFSLMTLRDFGM 136
Query: 512 GKQGNEQRIQREAHFLLEALRKTHGQPFDPTFLIGCAPCNVISDILFRQHFDYNDKTCLR 691
GK+ E R+Q+EA L+E LRKT G P DPTF++GCAPCNVI I+F+ HFDY D+ L
Sbjct: 137 GKRSMEDRVQQEACCLVEELRKTDGLPCDPTFILGCAPCNVICSIIFQNHFDYKDQIFLD 196
Query: 692 LMSMFNENFYLLSTGWIQVKH 754
LM NEN +L + WIQ KH
Sbjct: 197 LMERLNENARILGSPWIQEKH 217
>ref|XP_002703224.1| PREDICTED: cytochrome P450, family 2, subfamily C, polypeptide
87-like [Bos taurus].
Length = 431
Score = 243 bits (621), Expect = 1e-64
Identities = 119/201 (59%), Positives = 144/201 (71%), Gaps = 1/201 (0%)
Frame = +2
Query: 155 ISIWKHIHSSWKLPPGPFPLPIVGNIFQLDLKNIPKSFTMLAERYGPVFTVYLGSRRIVV 334
IS+WK KLPPGP PLPI+GNI QLD+K+I KS + L++ YGPVFT+Y G +VV
Sbjct: 17 ISLWKQSSGKGKLPPGPTPLPILGNILQLDVKDISKSVSNLSKVYGPVFTLYFGMNPLVV 76
Query: 335 LHGYKAVKEVLLHYKNEFSGRGEIPTFQ-VHKDKGVIFNNGPTWRDTRRFSLTTLRDFGM 511
LHGY+AVKE L+ EFSGRG P Q K GVIF+NG W++TRRFSL TLRDFGM
Sbjct: 77 LHGYEAVKEALIGLGEEFSGRGSCPVIQRASKGYGVIFSNGKIWKETRRFSLMTLRDFGM 136
Query: 512 GKQGNEQRIQREAHFLLEALRKTHGQPFDPTFLIGCAPCNVISDILFRQHFDYNDKTCLR 691
GK+ E R+Q+EA L+E LRKT G P DPTF++GCAPCNVI I+F+ HFDY D+ L
Sbjct: 137 GKRSMEDRVQQEACCLVEELRKTDGLPCDPTFILGCAPCNVICSIIFQNHFDYKDQIFLD 196
Query: 692 LMSMFNENFYLLSTGWIQVKH 754
LM NEN +L + WIQ KH
Sbjct: 197 LMERLNENARILGSPWIQEKH 217
>ref|XP_002698440.1| PREDICTED: cytochrome P450, family 2, subfamily C, polypeptide
87-like isoform 2 [Bos taurus].
Length = 490
Score = 239 bits (611), Expect = 2e-63
Identities = 117/199 (58%), Positives = 143/199 (71%), Gaps = 1/199 (0%)
Frame = +2
Query: 155 ISIWKHIHSSWKLPPGPFPLPIVGNIFQLDLKNIPKSFTMLAERYGPVFTVYLGSRRIVV 334
IS+WK KLPPGP PLPI+GNI QLD+K+I KS + L++ YGPVFT+Y G +VV
Sbjct: 17 ISLWKQSSGKGKLPPGPTPLPILGNILQLDVKDISKSVSNLSKVYGPVFTLYFGMNPLVV 76
Query: 335 LHGYKAVKEVLLHYKNEFSGRGEIPTFQ-VHKDKGVIFNNGPTWRDTRRFSLTTLRDFGM 511
LHGY+AVKE L+ EFSGRG P Q K GVIF+NG W++TRRFSL TLRDFGM
Sbjct: 77 LHGYEAVKEALIGLGEEFSGRGSCPVIQRASKGYGVIFSNGKIWKETRRFSLMTLRDFGM 136
Query: 512 GKQGNEQRIQREAHFLLEALRKTHGQPFDPTFLIGCAPCNVISDILFRQHFDYNDKTCLR 691
GK+ E R+Q+EA L+E LRKT G P DPTF++GCAPCNVI I+F+ HFDY D+ L
Sbjct: 137 GKRSMEDRVQQEACCLVEELRKTDGLPCDPTFILGCAPCNVICSIIFQNHFDYKDQIFLD 196
Query: 692 LMSMFNENFYLLSTGWIQV 748
LM NEN +L + WIQ+
Sbjct: 197 LMERLNENARILGSPWIQL 215
>ref|XP_002698439.1| PREDICTED: cytochrome P450, family 2, subfamily C, polypeptide
87-like isoform 1 [Bos taurus].
Length = 490
Score = 239 bits (611), Expect = 2e-63
Identities = 117/199 (58%), Positives = 143/199 (71%), Gaps = 1/199 (0%)
Frame = +2
Query: 155 ISIWKHIHSSWKLPPGPFPLPIVGNIFQLDLKNIPKSFTMLAERYGPVFTVYLGSRRIVV 334
IS+WK KLPPGP PLPI+GNI QLD+K+I KS + L++ YGPVFT+Y G +VV
Sbjct: 17 ISLWKQSSGKGKLPPGPTPLPILGNILQLDVKDISKSVSNLSKVYGPVFTLYFGMNPLVV 76
Query: 335 LHGYKAVKEVLLHYKNEFSGRGEIPTFQ-VHKDKGVIFNNGPTWRDTRRFSLTTLRDFGM 511
LHGY+AVKE L+ EFSGRG P Q K GVIF+NG W++TRRFSL TLRDFGM
Sbjct: 77 LHGYEAVKEALIGLGEEFSGRGSCPVIQRASKGYGVIFSNGKIWKETRRFSLMTLRDFGM 136
Query: 512 GKQGNEQRIQREAHFLLEALRKTHGQPFDPTFLIGCAPCNVISDILFRQHFDYNDKTCLR 691
GK+ E R+Q+EA L+E LRKT G P DPTF++GCAPCNVI I+F+ HFDY D+ L
Sbjct: 137 GKRSMEDRVQQEACCLVEELRKTDGLPCDPTFILGCAPCNVICSIIFQNHFDYKDQIFLD 196
Query: 692 LMSMFNENFYLLSTGWIQV 748
LM NEN +L + WIQ+
Sbjct: 197 LMERLNENARILGSPWIQL 215
>ref|XP_612374.2| PREDICTED: cytochrome P450, family 2, subfamily C, polypeptide
87-like isoform 2 [Bos taurus].
Length = 490
Score = 239 bits (611), Expect = 2e-63
Identities = 117/199 (58%), Positives = 143/199 (71%), Gaps = 1/199 (0%)
Frame = +2
Query: 155 ISIWKHIHSSWKLPPGPFPLPIVGNIFQLDLKNIPKSFTMLAERYGPVFTVYLGSRRIVV 334
IS+WK KLPPGP PLPI+GNI QLD+K+I KS + L++ YGPVFT+Y G +VV
Sbjct: 17 ISLWKQSSGKGKLPPGPTPLPILGNILQLDVKDISKSVSNLSKVYGPVFTLYFGMNPLVV 76
Query: 335 LHGYKAVKEVLLHYKNEFSGRGEIPTFQ-VHKDKGVIFNNGPTWRDTRRFSLTTLRDFGM 511
LHGY+AVKE L+ EFSGRG P Q K GVIF+NG W++TRRFSL TLRDFGM
Sbjct: 77 LHGYEAVKEALIGLGEEFSGRGSCPVIQRASKGYGVIFSNGKIWKETRRFSLMTLRDFGM 136
Query: 512 GKQGNEQRIQREAHFLLEALRKTHGQPFDPTFLIGCAPCNVISDILFRQHFDYNDKTCLR 691
GK+ E R+Q+EA L+E LRKT G P DPTF++GCAPCNVI I+F+ HFDY D+ L
Sbjct: 137 GKRSMEDRVQQEACCLVEELRKTDGLPCDPTFILGCAPCNVICSIIFQNHFDYKDQIFLD 196
Query: 692 LMSMFNENFYLLSTGWIQV 748
LM NEN +L + WIQ+
Sbjct: 197 LMERLNENARILGSPWIQL 215
>ref|NP_001103262.1| cytochrome P450, family 2, subfamily C, polypeptide 19 [Bos
taurus].
Length = 490
Score = 236 bits (603), Expect = 2e-62
Identities = 112/205 (54%), Positives = 147/205 (71%), Gaps = 1/205 (0%)
Frame = +2
Query: 161 IWKHIHSSWKLPPGPFPLPIVGNIFQLDLKNIPKSFTMLAERYGPVFTVYLGSRRIVVLH 340
+W H+ KLPPGP PLPIVGNI Q+++KN+ KS + LAE YGPVFT+Y G + VVLH
Sbjct: 19 LWNQRHAKGKLPPGPTPLPIVGNILQINIKNVSKSISKLAEDYGPVFTLYFGMKPTVVLH 78
Query: 341 GYKAVKEVLLHYKNEFSGRGEIPTFQ-VHKDKGVIFNNGPTWRDTRRFSLTTLRDFGMGK 517
GY+AVK+VL+ EFSGRG +P +++ G++F+NG W+ TRRFSL LR+ GMGK
Sbjct: 79 GYEAVKQVLIDQSEEFSGRGSLPVADNINQGLGIVFSNGEIWKQTRRFSLMVLRNMGMGK 138
Query: 518 QGNEQRIQREAHFLLEALRKTHGQPFDPTFLIGCAPCNVISDILFRQHFDYNDKTCLRLM 697
+ E RIQ EA L+EAL+KT+G P DPT L+ CAPCNVI I+FR F+YND+ L L+
Sbjct: 139 RTIEHRIQEEALCLVEALKKTNGSPCDPTLLLSCAPCNVICSIIFRNRFEYNDERLLTLI 198
Query: 698 SMFNENFYLLSTGWIQVKHFPPSCL 772
FNEN L+ST W+++ + PS L
Sbjct: 199 KYFNENSRLVSTPWVELYNTFPSLL 223
>ref|XP_002698442.1| PREDICTED: cytochrome P450 family 2 subfamily C polypeptide 18-like
isoform 1 [Bos taurus].
Length = 490
Score = 234 bits (598), Expect = 7e-62
Identities = 116/204 (56%), Positives = 145/204 (71%), Gaps = 2/204 (0%)
Frame = +2
Query: 155 ISIWKHIHSSWKLPPGPFPLPIVGNIFQLDLKNIPKSFTMLAERYGPVFTVYLGSRRIVV 334
+S+WK KLPPGP PLPI+GNI QLD+KNI KS T L++ YGPVFTVY G + IVV
Sbjct: 17 LSLWKQSSGKGKLPPGPTPLPILGNILQLDVKNISKSLTNLSKVYGPVFTVYFGMKPIVV 76
Query: 335 LHGYKAVKEVLLHYKNEFSGRGEIPTFQ-VHKDKGVIFNNGPTWRDTRRFSLTTLRDFGM 511
LHGY+AVKE L+ EFSGRG P + + G++F+NG TW++ RRFSL TLR+FGM
Sbjct: 77 LHGYEAVKEALIDLGEEFSGRGMFPLAERANIVNGILFSNGKTWKEIRRFSLMTLRNFGM 136
Query: 512 GKQGNEQRIQREAHFLLEALRKTHGQPFDPTFLIGCAPCNVISDILFRQHFDYNDKTCLR 691
GK+ E R+Q EA L+E LRKT+G P DPTF++GCAPCNVI I+F+ FDY D L
Sbjct: 137 GKRSIEDRVQEEACCLVEELRKTNGLPCDPTFILGCAPCNVICSIIFQNRFDYKDPVFLD 196
Query: 692 LMSMFNENFYLLSTGWIQV-KHFP 760
LM NE +LS+ W+QV +FP
Sbjct: 197 LMERLNEILRILSSPWVQVCNNFP 220
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 42,251,821
Number of extensions: 1274222
Number of successful extensions: 4295
Number of sequences better than 1.0e-05: 52
Number of HSP's gapped: 4235
Number of HSP's successfully gapped: 53
Length of query: 332
Length of database: 17,681,374
Length adjustment: 103
Effective length of query: 229
Effective length of database: 14,273,310
Effective search space: 3268587990
Effective search space used: 3268587990
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007013
(996 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001003339.1| cytochrome P450 2E1 [Canis lupus familiaris]. 325 5e-89
Alignment gi|NP_001183973.1| cytochrome P450 2C21 [Canis lupus familiaris]. 229 3e-60
Alignment gi|NP_001003334.1| cytochrome P450 2C41 [Canis lupus familiaris]. 216 2e-56
Alignment gi|XP_541606.2| PREDICTED: similar to Cytochrome P450 2G1 (CYPI... 201 7e-52
Alignment gi|XP_855301.1| PREDICTED: similar to cytochrome P450, family 2... 195 5e-50
Alignment gi|NP_001032422.1| cytochrome P450 family 2 subfamily A polypep... 192 4e-49
Alignment gi|NP_001041492.1| hypothetical protein LOC484493 [Canis lupus ... 189 4e-48
Alignment gi|NP_001006653.1| cytochrome P450 2B11 [Canis lupus familiaris]. 180 2e-45
Alignment gi|XP_855605.1| PREDICTED: cytochrome P450 2B11 [Canis familiar... 180 2e-45
Alignment gi|XP_533661.2| PREDICTED: similar to cytochrome P450 monooxyge... 160 1e-39
>ref|NP_001003339.1| cytochrome P450 2E1 [Canis lupus familiaris].
Length = 494
Score = 325 bits (832), Expect = 5e-89
Identities = 153/225 (68%), Positives = 182/225 (80%)
Frame = +2
Query: 98 MTALGIXXXXXXXXXXXXXISIWKHIHSSWKLPPGPFPLPIVGNIFQLDLKNIPKSFTML 277
M ALGI ISIWK I+S WKLPPGPFPLPI+GNI Q+D+KN+PKS L
Sbjct: 1 MAALGITVALLVWMATLMLISIWKQIYSRWKLPPGPFPLPIIGNILQVDIKNVPKSLAKL 60
Query: 278 AERYGPVFTVYLGSRRIVVLHGYKAVKEVLLHYKNEFSGRGEIPTFQVHKDKGVIFNNGP 457
AE+YGPVFT+YLGS+R VVLHGYKAVKEVLL +KN+ SGRGE+ FQ HKD+G+ FNNGP
Sbjct: 61 AEQYGPVFTLYLGSQRTVVLHGYKAVKEVLLDHKNDLSGRGEVFAFQSHKDRGITFNNGP 120
Query: 458 TWRDTRRFSLTTLRDFGMGKQGNEQRIQREAHFLLEALRKTHGQPFDPTFLIGCAPCNVI 637
W+DTRR SL+TLRD+GMGK+GNE+RIQRE FLLEALR T GQPFDPTFL+G AP NVI
Sbjct: 121 GWKDTRRLSLSTLRDYGMGKRGNEERIQREIPFLLEALRGTRGQPFDPTFLLGFAPFNVI 180
Query: 638 SDILFRQHFDYNDKTCLRLMSMFNENFYLLSTGWIQVKHFPPSCL 772
+DILF +HFDY+D+T LR+ +FNENF+LLSTGW+Q+ + PS L
Sbjct: 181 ADILFHKHFDYSDQTGLRIQKLFNENFHLLSTGWLQLYNIFPSYL 225
>ref|NP_001183973.1| cytochrome P450 2C21 [Canis lupus familiaris].
Length = 490
Score = 229 bits (584), Expect = 3e-60
Identities = 108/197 (54%), Positives = 139/197 (70%), Gaps = 1/197 (0%)
Frame = +2
Query: 161 IWKHIHSSWKLPPGPFPLPIVGNIFQLDLKNIPKSFTMLAERYGPVFTVYLGSRRIVVLH 340
+W + KLPPGP PLPI+GNI Q++ KN+ KS + LAE YGPVFTVY G + VVL+
Sbjct: 19 LWNQNRAKGKLPPGPTPLPIIGNILQINTKNVSKSLSKLAENYGPVFTVYFGMKPTVVLY 78
Query: 341 GYKAVKEVLLHYKNEFSGRGEIPTFQ-VHKDKGVIFNNGPTWRDTRRFSLTTLRDFGMGK 517
GY+AVKE L+ EFSGRG P + G++F+NG W+ TRRFSLT LR+ GMGK
Sbjct: 79 GYEAVKEALIDRSEEFSGRGHFPLLDWTIQGLGIVFSNGEKWKQTRRFSLTVLRNMGMGK 138
Query: 518 QGNEQRIQREAHFLLEALRKTHGQPFDPTFLIGCAPCNVISDILFRQHFDYNDKTCLRLM 697
+ E RIQ EA +L+EAL+KT+ P DPTFL+GCAPCNVI I+F+ F+Y+DK L L+
Sbjct: 139 KTVEDRIQEEALYLVEALKKTNASPCDPTFLLGCAPCNVICSIIFQNRFEYDDKDFLTLL 198
Query: 698 SMFNENFYLLSTGWIQV 748
F+EN + ST WIQ+
Sbjct: 199 EYFHENLLISSTSWIQL 215
>ref|NP_001003334.1| cytochrome P450 2C41 [Canis lupus familiaris].
Length = 489
Score = 216 bits (551), Expect = 2e-56
Identities = 107/207 (51%), Positives = 139/207 (67%), Gaps = 1/207 (0%)
Frame = +2
Query: 155 ISIWKHIHSSWKLPPGPFPLPIVGNIFQLDLKNIPKSFTMLAERYGPVFTVYLGSRRIVV 334
+S+WK KLPPGP PLP +GNI QLD K+I KS + L++ YGPVFT+Y G + VV
Sbjct: 17 LSLWKQSSRKGKLPPGPTPLPFIGNILQLD-KDINKSLSNLSKAYGPVFTLYFGMKPTVV 75
Query: 335 LHGYKAVKEVLLHYKNEFSGRGEIPTFQ-VHKDKGVIFNNGPTWRDTRRFSLTTLRDFGM 511
LHGY AVKE L+ EFS RG P + V G+IF +G W++ RRF+LTTLR+ GM
Sbjct: 76 LHGYDAVKETLIDLGEEFSARGRFPIAEKVSGGHGIIFTSGNRWKEMRRFALTTLRNLGM 135
Query: 512 GKQGNEQRIQREAHFLLEALRKTHGQPFDPTFLIGCAPCNVISDILFRQHFDYNDKTCLR 691
GK E R+Q EA +L+E LRKT+ P DPTF++GCA CNVI I+F+ FDY D+T +
Sbjct: 136 GKSDLESRVQEEACYLVEELRKTNALPCDPTFVLGCASCNVICSIIFQNRFDYTDQTLIG 195
Query: 692 LMSMFNENFYLLSTGWIQVKHFPPSCL 772
+ NENF +LS+ WIQ + P+ L
Sbjct: 196 FLEKLNENFRILSSPWIQAYNSFPALL 222
>ref|XP_541606.2| PREDICTED: similar to Cytochrome P450 2G1 (CYPIIG1) (P450-OLF1)
(Olfactive) [Canis familiaris].
Length = 494
Score = 201 bits (512), Expect = 7e-52
Identities = 101/196 (51%), Positives = 130/196 (66%), Gaps = 1/196 (0%)
Frame = +2
Query: 164 WKHIHSSWKLPPGPFPLPIVGNIFQLDLKNIPKSFTMLAERYGPVFTVYLGSRRIVVLHG 343
WK KLPPGP P+P +GN+ Q+ +SF L E+YGP+FTVY+G R +VVL G
Sbjct: 24 WKRNSKGGKLPPGPTPIPFLGNVLQVRTDATFQSFMKLREKYGPIFTVYMGPRPVVVLCG 83
Query: 344 YKAVKEVLLHYKNEFSGRGEIPTFQVH-KDKGVIFNNGPTWRDTRRFSLTTLRDFGMGKQ 520
++AVKE L+ +EFSGRGE+ + + + + GV NG WR RRFSLT LRDFGMGK+
Sbjct: 84 HEAVKEALVDRADEFSGRGELASIERNFQGHGVALANGERWRILRRFSLTILRDFGMGKR 143
Query: 521 GNEQRIQREAHFLLEALRKTHGQPFDPTFLIGCAPCNVISDILFRQHFDYNDKTCLRLMS 700
E+RIQ EA FLLE LRKT G P +PTF + NVIS ++F FDY DK L+L+
Sbjct: 144 SIEERIQEEAGFLLEELRKTKGSPIEPTFFLSRTVSNVISSVVFGSRFDYEDKQFLKLLQ 203
Query: 701 MFNENFYLLSTGWIQV 748
M NE+F +ST W Q+
Sbjct: 204 MINESFIEMSTPWAQL 219
>ref|XP_855301.1| PREDICTED: similar to cytochrome P450, family 2, subfamily F,
polypeptide 1 [Canis familiaris].
Length = 582
Score = 195 bits (496), Expect = 5e-50
Identities = 103/260 (39%), Positives = 154/260 (59%), Gaps = 3/260 (1%)
Frame = +2
Query: 2 WLAG--HPPSQGCIIKGCLSTGASPHIERSPEGAMTALGIXXXXXXXXXXXXXISIWKHI 175
W G +P QG ++ ++ P I++ P A T G+ + + +
Sbjct: 41 WATGKAYPELQGTDLEQ-ITPQLPPKIQQIPAAAFTMDGVSTAILLGLLALAFLFLILNS 99
Query: 176 HSSWKLPPGPFPLPIVGNIFQLDLKNIPKSFTMLAERYGPVFTVYLGSRRIVVLHGYKAV 355
+LPPGP PLP +GN+ QL +++ S T L++ YG V+TV+LG RR+VVL GY+AV
Sbjct: 100 RGKSQLPPGPRPLPFLGNLLQLRSQDMLTSLTKLSKEYGSVYTVHLGPRRVVVLSGYQAV 159
Query: 356 KEVLLHYKNEFSGRGEIPTF-QVHKDKGVIFNNGPTWRDTRRFSLTTLRDFGMGKQGNEQ 532
KE L+ +FSGRG+ P F K G+ F+NG W+ RRFS+ LR+FGMGK+ E+
Sbjct: 160 KEALVDQGEDFSGRGDYPVFFNFTKGNGIAFSNGDRWKVLRRFSVQILRNFGMGKRSIEE 219
Query: 533 RIQREAHFLLEALRKTHGQPFDPTFLIGCAPCNVISDILFRQHFDYNDKTCLRLMSMFNE 712
RI E FLL LRKT G+PFDPTF++ + N+I ++F FDY+D+ L ++ + N+
Sbjct: 220 RILEEGSFLLAELRKTEGKPFDPTFVLSRSVSNIICSVIFGSRFDYDDERLLTIIRLIND 279
Query: 713 NFYLLSTGWIQVKHFPPSCL 772
NF ++S W ++ + PS L
Sbjct: 280 NFQIMSGPWGELYNIFPSLL 299
>ref|NP_001032422.1| cytochrome P450 family 2 subfamily A polypeptide 13 [Canis lupus
familiaris].
Length = 494
Score = 192 bits (488), Expect = 4e-49
Identities = 104/211 (49%), Positives = 132/211 (62%), Gaps = 9/211 (4%)
Frame = +2
Query: 155 ISIWKHIHSSWKLPPGPFPLPIVGNIFQLDLKNIPKSFTMLAERYGPVFTVYLGSRRIVV 334
+S+WK KLPPGP PLP +GN QL+ + + S ++ERYGPVFT++LG R +VV
Sbjct: 21 MSVWKQRKLGGKLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRPVVV 80
Query: 335 LHGYKAVKEVLLHYKNEFSGRGEIPTFQ-VHKDKGVIFNNGPTWRDTRRFSLTTLRDFGM 511
L G++AVKE L+ EFSGRGE TF + K GV F+NG + RRFS+TTLRDFG+
Sbjct: 81 LCGHEAVKEALVDQAEEFSGRGEQATFDWLFKGYGVAFSNGERAKQLRRFSITTLRDFGV 140
Query: 512 GKQGNEQRIQREAHFLLEALRKTHGQPFDPTFLIGCAPCNVISDILFRQHFDYNDKTCLR 691
GK+G E+RIQ EA FL+EALR T G DPTF + NVIS I+F FDY DK L
Sbjct: 141 GKRGIEERIQEEAGFLIEALRGTRGAFIDPTFFLSRTVSNVISSIVFGDRFDYEDKEFLS 200
Query: 692 LMSMFNENFYLLSTGWIQ--------VKHFP 760
L+ M +F +T Q +KH P
Sbjct: 201 LLRMMLGSFQFTATSMGQLYEMFYSVMKHLP 231
>ref|NP_001041492.1| hypothetical protein LOC484493 [Canis lupus familiaris].
Length = 494
Score = 189 bits (480), Expect = 4e-48
Identities = 100/196 (51%), Positives = 129/196 (65%), Gaps = 1/196 (0%)
Frame = +2
Query: 164 WKHIHSSWKLPPGPFPLPIVGNIFQLDLKNIPKSFTMLAERYGPVFTVYLGSRRIVVLHG 343
WK + KLPPGP PLP +GN QL+++ + SF +++RYGPVFT++LG RR+VVL G
Sbjct: 27 WKLLE---KLPPGPTPLPFIGNYLQLNIQQMSDSFMKISKRYGPVFTIHLGPRRVVVLCG 83
Query: 344 YKAVKEVLLHYKNEFSGRGEIPTFQ-VHKDKGVIFNNGPTWRDTRRFSLTTLRDFGMGKQ 520
Y+AVKE L+ EFSGRG TF + K GV F+NG + RRFS+TTLRDFG+GK+
Sbjct: 84 YEAVKEALVDQAEEFSGRGAQATFDTLFKGYGVTFSNGERAKQLRRFSITTLRDFGVGKR 143
Query: 521 GNEQRIQREAHFLLEALRKTHGQPFDPTFLIGCAPCNVISDILFRQHFDYNDKTCLRLMS 700
G E+RIQ EA FL+EAL+ T G DPTF + NVIS I+F FDY DK L L+
Sbjct: 144 GIEERIQEEAGFLIEALQGTRGAFIDPTFFLSRTVSNVISSIVFGDRFDYEDKEFLSLLR 203
Query: 701 MFNENFYLLSTGWIQV 748
M +F +T Q+
Sbjct: 204 MMLGSFQFTATSMGQL 219
>ref|NP_001006653.1| cytochrome P450 2B11 [Canis lupus familiaris].
Length = 494
Score = 180 bits (456), Expect = 2e-45
Identities = 94/182 (51%), Positives = 119/182 (65%), Gaps = 1/182 (0%)
Frame = +2
Query: 191 LPPGPFPLPIVGNIFQLDLKNIPKSFTMLAERYGPVFTVYLGSRRIVVLHGYKAVKEVLL 370
LPPGP PLPI+GN Q+D K + KSF L E+YG VFTVYLG RR V+L G A++E L+
Sbjct: 30 LPPGPRPLPILGNFLQMDRKGLLKSFLRLQEKYGDVFTVYLGPRRTVMLCGIDAIREALV 89
Query: 371 HYKNEFSGRGEIPTFQ-VHKDKGVIFNNGPTWRDTRRFSLTTLRDFGMGKQGNEQRIQRE 547
FSGRG+I + V + GV+F NG W+ RRFSL T+RDFGMGK+ E+RIQ E
Sbjct: 90 DNAEAFSGRGKIAVVEPVFQGYGVVFANGERWKTLRRFSLATMRDFGMGKRSVEERIQEE 149
Query: 548 AHFLLEALRKTHGQPFDPTFLIGCAPCNVISDILFRQHFDYNDKTCLRLMSMFNENFYLL 727
A L+E LRKT G DPTF N+I I+F + F Y D LRLM++F +F L+
Sbjct: 150 AQCLVEELRKTEGVLQDPTFFFHSMTANIICSIVFGKRFGYKDPEFLRLMNLFYVSFALI 209
Query: 728 ST 733
S+
Sbjct: 210 SS 211
>ref|XP_855605.1| PREDICTED: cytochrome P450 2B11 [Canis familiaris].
Length = 494
Score = 180 bits (456), Expect = 2e-45
Identities = 94/182 (51%), Positives = 119/182 (65%), Gaps = 1/182 (0%)
Frame = +2
Query: 191 LPPGPFPLPIVGNIFQLDLKNIPKSFTMLAERYGPVFTVYLGSRRIVVLHGYKAVKEVLL 370
LPPGP PLPI+GN Q+D K + KSF L E+YG VFTVYLG RR V+L G A++E L+
Sbjct: 30 LPPGPRPLPILGNFLQMDRKGLLKSFLRLQEKYGDVFTVYLGPRRTVMLCGIDAIREALV 89
Query: 371 HYKNEFSGRGEIPTFQ-VHKDKGVIFNNGPTWRDTRRFSLTTLRDFGMGKQGNEQRIQRE 547
FSGRG+I + V + GV+F NG W+ RRFSL T+RDFGMGK+ E+RIQ E
Sbjct: 90 DNAEAFSGRGKIAVVEPVFQGYGVVFANGERWKTLRRFSLATMRDFGMGKRSVEERIQEE 149
Query: 548 AHFLLEALRKTHGQPFDPTFLIGCAPCNVISDILFRQHFDYNDKTCLRLMSMFNENFYLL 727
A L+E LRKT G DPTF N+I I+F + F Y D LRLM++F +F L+
Sbjct: 150 AQCLVEELRKTEGVLQDPTFFFHSMTANIICSIVFGKRFGYKDPEFLRLMNLFYVSFALI 209
Query: 728 ST 733
S+
Sbjct: 210 SS 211
>ref|XP_533661.2| PREDICTED: similar to cytochrome P450 monooxygenase CYP2T1 [Canis
familiaris].
Length = 495
Score = 160 bits (406), Expect = 1e-39
Identities = 81/195 (41%), Positives = 122/195 (62%), Gaps = 1/195 (0%)
Frame = +2
Query: 191 LPPGPFPLPIVGNIFQLDLKNIPKSFTMLAERYGPVFTVYLGSRRIVVLHGYKAVKEVLL 370
LPPGP PLP++GN+ QL+ + + ++ L+ R+GPVFTV LG R VVL GY A+++ L+
Sbjct: 34 LPPGPTPLPLLGNLLQLESRRLDRALMELSGRWGPVFTVRLGPRPAVVLCGYSALRDALV 93
Query: 371 HYKNEFSGRGEIPTFQ-VHKDKGVIFNNGPTWRDTRRFSLTTLRDFGMGKQGNEQRIQRE 547
+ FSGRG + F+ G++F+NG WR R F+L L++FG+G + E+RI E
Sbjct: 94 LQADAFSGRGAMAVFERFTHGNGIVFSNGLRWRTLRNFALGALKEFGLGTRTIEERILEE 153
Query: 548 AHFLLEALRKTHGQPFDPTFLIGCAPCNVISDILFRQHFDYNDKTCLRLMSMFNENFYLL 727
A LL + T G PFDP L+G A NVI ++F + Y D RL+ +FN+NF ++
Sbjct: 154 AACLLGEFQATTGAPFDPRRLLGNAVSNVICSVVFGNRYGYEDPEFQRLLDLFNDNFRIM 213
Query: 728 STGWIQVKHFPPSCL 772
S+ W ++ + P+ L
Sbjct: 214 SSRWGEMYNVFPTLL 228
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 44,179,732
Number of extensions: 1323793
Number of successful extensions: 4439
Number of sequences better than 1.0e-05: 20
Number of HSP's gapped: 4406
Number of HSP's successfully gapped: 20
Length of query: 332
Length of database: 18,874,504
Length adjustment: 103
Effective length of query: 229
Effective length of database: 15,440,896
Effective search space: 3535965184
Effective search space used: 3535965184
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007013
(996 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_000764.1| cytochrome P450 2E1 [Homo sapiens]. 353 2e-97
Alignment gi|NP_000761.3| cytochrome P450 2C8 isoform a [Homo sapiens]. 238 8e-63
Alignment gi|NP_001122397.1| cytochrome P450 2C18 isoform 2 [Homo sapiens]. 235 4e-62
Alignment gi|NP_000760.1| cytochrome P450 2C19 [Homo sapiens]. 234 1e-61
Alignment gi|NP_000763.1| cytochrome P450 2C18 isoform 1 [Homo sapiens]. 233 2e-61
Alignment gi|NP_000762.2| cytochrome P450 2C9 [Homo sapiens]. 229 3e-60
Alignment gi|NP_000753.3| cytochrome P450 2A6 [Homo sapiens]. 192 3e-49
Alignment gi|NP_000757.2| cytochrome P450 2A13 [Homo sapiens]. 192 3e-49
Alignment gi|NP_000755.2| cytochrome P450 2A7 isoform 1 [Homo sapiens]. 190 2e-48
Alignment gi|NP_000765.2| cytochrome P450 2F1 [Homo sapiens]. 186 4e-47
>ref|NP_000764.1| cytochrome P450 2E1 [Homo sapiens].
Length = 493
Score = 353 bits (905), Expect = 2e-97
Identities = 160/225 (71%), Positives = 193/225 (85%)
Frame = +2
Query: 98 MTALGIXXXXXXXXXXXXXISIWKHIHSSWKLPPGPFPLPIVGNIFQLDLKNIPKSFTML 277
M+ALG+ +S+W+ +HSSW LPPGPFPLPI+GN+FQL+LKNIPKSFT L
Sbjct: 1 MSALGVTVALLVWAAFLLLVSMWRQVHSSWNLPPGPFPLPIIGNLFQLELKNIPKSFTRL 60
Query: 278 AERYGPVFTVYLGSRRIVVLHGYKAVKEVLLHYKNEFSGRGEIPTFQVHKDKGVIFNNGP 457
A+R+GPVFT+Y+GS+R+VV+HGYKAVKE LL YK+EFSGRG++P F H+D+G+IFNNGP
Sbjct: 61 AQRFGPVFTLYVGSQRMVVMHGYKAVKEALLDYKDEFSGRGDLPAFHAHRDRGIIFNNGP 120
Query: 458 TWRDTRRFSLTTLRDFGMGKQGNEQRIQREAHFLLEALRKTHGQPFDPTFLIGCAPCNVI 637
TW+D RRFSLTTLR++GMGKQGNE RIQREAHFLLEALRKT GQPFDPTFLIGCAPCNVI
Sbjct: 121 TWKDIRRFSLTTLRNYGMGKQGNESRIQREAHFLLEALRKTQGQPFDPTFLIGCAPCNVI 180
Query: 638 SDILFRQHFDYNDKTCLRLMSMFNENFYLLSTGWIQVKHFPPSCL 772
+DILFR+HFDYND+ LRLM +FNENF+LLST W+Q+ + PS L
Sbjct: 181 ADILFRKHFDYNDEKFLRLMYLFNENFHLLSTPWLQLYNNFPSFL 225
>ref|NP_000761.3| cytochrome P450 2C8 isoform a [Homo sapiens].
Length = 490
Score = 238 bits (606), Expect = 8e-63
Identities = 115/208 (55%), Positives = 147/208 (70%), Gaps = 1/208 (0%)
Frame = +2
Query: 158 SIWKHIHSSWKLPPGPFPLPIVGNIFQLDLKNIPKSFTMLAERYGPVFTVYLGSRRIVVL 337
S+W+ KLPPGP PLPI+GN+ Q+D+K+I KSFT ++ YGPVFTVY G IVV
Sbjct: 18 SLWRQSCRRRKLPPGPTPLPIIGNMLQIDVKDICKSFTNFSKVYGPVFTVYFGMNPIVVF 77
Query: 338 HGYKAVKEVLLHYKNEFSGRGEIPTFQ-VHKDKGVIFNNGPTWRDTRRFSLTTLRDFGMG 514
HGY+AVKE L+ EFSGRG P Q + K G+I +NG W++ RRFSLTTLR+FGMG
Sbjct: 78 HGYEAVKEALIDNGEEFSGRGNSPISQRITKGLGIISSNGKRWKEIRRFSLTTLRNFGMG 137
Query: 515 KQGNEQRIQREAHFLLEALRKTHGQPFDPTFLIGCAPCNVISDILFRQHFDYNDKTCLRL 694
K+ E R+Q EAH L+E LRKT P DPTF++GCAPCNVI ++F++ FDY D+ L L
Sbjct: 138 KRSIEDRVQEEAHCLVEELRKTKASPCDPTFILGCAPCNVICSVVFQKRFDYKDQNFLTL 197
Query: 695 MSMFNENFYLLSTGWIQVKHFPPSCLAC 778
M FNENF +L++ WIQV + P + C
Sbjct: 198 MKRFNENFRILNSPWIQVCNNFPLLIDC 225
>ref|NP_001122397.1| cytochrome P450 2C18 isoform 2 [Homo sapiens].
Length = 431
Score = 235 bits (600), Expect = 4e-62
Identities = 110/201 (54%), Positives = 143/201 (71%), Gaps = 1/201 (0%)
Frame = +2
Query: 155 ISIWKHIHSSWKLPPGPFPLPIVGNIFQLDLKNIPKSFTMLAERYGPVFTVYLGSRRIVV 334
+S+W+ +LP GP PLPI+GNI QLD+K++ KS T ++ YGPVFTVY G + IVV
Sbjct: 17 LSLWRQSSGRGRLPSGPTPLPIIGNILQLDVKDMSKSLTNFSKVYGPVFTVYFGLKPIVV 76
Query: 335 LHGYKAVKEVLLHYKNEFSGRGEIPTFQ-VHKDKGVIFNNGPTWRDTRRFSLTTLRDFGM 511
LHGY+AVKE L+ + EFSGRG P + V+K G++F+NG W++ RRF L TLR+FGM
Sbjct: 77 LHGYEAVKEALIDHGEEFSGRGSFPVAEKVNKGLGILFSNGKRWKEIRRFCLMTLRNFGM 136
Query: 512 GKQGNEQRIQREAHFLLEALRKTHGQPFDPTFLIGCAPCNVISDILFRQHFDYNDKTCLR 691
GK+ E R+Q EA L+E LRKT+ P DPTF++GCAPCNVI ++F FDY D+ L
Sbjct: 137 GKRSIEDRVQEEARCLVEELRKTNASPCDPTFILGCAPCNVICSVIFHDRFDYKDQRFLN 196
Query: 692 LMSMFNENFYLLSTGWIQVKH 754
LM FNEN +LS+ WIQ KH
Sbjct: 197 LMEKFNENLRILSSPWIQEKH 217
>ref|NP_000760.1| cytochrome P450 2C19 [Homo sapiens].
Length = 490
Score = 234 bits (596), Expect = 1e-61
Identities = 109/204 (53%), Positives = 145/204 (71%), Gaps = 2/204 (0%)
Frame = +2
Query: 155 ISIWKHIHSSWKLPPGPFPLPIVGNIFQLDLKNIPKSFTMLAERYGPVFTVYLGSRRIVV 334
+SIW+ KLPPGP PLP++GNI Q+D+K++ KS T L++ YGPVFT+Y G R+VV
Sbjct: 17 LSIWRQSSGRGKLPPGPTPLPVIGNILQIDIKDVSKSLTNLSKIYGPVFTLYFGLERMVV 76
Query: 335 LHGYKAVKEVLLHYKNEFSGRGEIPTFQ-VHKDKGVIFNNGPTWRDTRRFSLTTLRDFGM 511
LHGY+ VKE L+ EFSGRG P + ++ G++F+NG W++ RRFSL TLR+FGM
Sbjct: 77 LHGYEVVKEALIDLGEEFSGRGHFPLAERANRGFGIVFSNGKRWKEIRRFSLMTLRNFGM 136
Query: 512 GKQGNEQRIQREAHFLLEALRKTHGQPFDPTFLIGCAPCNVISDILFRQHFDYNDKTCLR 691
GK+ E R+Q EA L+E LRKT P DPTF++GCAPCNVI I+F++ FDY D+ L
Sbjct: 137 GKRSIEDRVQEEARCLVEELRKTKASPCDPTFILGCAPCNVICSIIFQKRFDYKDQQFLN 196
Query: 692 LMSMFNENFYLLSTGWIQV-KHFP 760
LM NEN ++ST WIQ+ +FP
Sbjct: 197 LMEKLNENIRIVSTPWIQICNNFP 220
>ref|NP_000763.1| cytochrome P450 2C18 isoform 1 [Homo sapiens].
Length = 490
Score = 233 bits (595), Expect = 2e-61
Identities = 111/204 (54%), Positives = 145/204 (71%), Gaps = 2/204 (0%)
Frame = +2
Query: 155 ISIWKHIHSSWKLPPGPFPLPIVGNIFQLDLKNIPKSFTMLAERYGPVFTVYLGSRRIVV 334
+S+W+ +LP GP PLPI+GNI QLD+K++ KS T ++ YGPVFTVY G + IVV
Sbjct: 17 LSLWRQSSGRGRLPSGPTPLPIIGNILQLDVKDMSKSLTNFSKVYGPVFTVYFGLKPIVV 76
Query: 335 LHGYKAVKEVLLHYKNEFSGRGEIPTFQ-VHKDKGVIFNNGPTWRDTRRFSLTTLRDFGM 511
LHGY+AVKE L+ + EFSGRG P + V+K G++F+NG W++ RRF L TLR+FGM
Sbjct: 77 LHGYEAVKEALIDHGEEFSGRGSFPVAEKVNKGLGILFSNGKRWKEIRRFCLMTLRNFGM 136
Query: 512 GKQGNEQRIQREAHFLLEALRKTHGQPFDPTFLIGCAPCNVISDILFRQHFDYNDKTCLR 691
GK+ E R+Q EA L+E LRKT+ P DPTF++GCAPCNVI ++F FDY D+ L
Sbjct: 137 GKRSIEDRVQEEARCLVEELRKTNASPCDPTFILGCAPCNVICSVIFHDRFDYKDQRFLN 196
Query: 692 LMSMFNENFYLLSTGWIQV-KHFP 760
LM FNEN +LS+ WIQV +FP
Sbjct: 197 LMEKFNENLRILSSPWIQVCNNFP 220
>ref|NP_000762.2| cytochrome P450 2C9 [Homo sapiens].
Length = 490
Score = 229 bits (584), Expect = 3e-60
Identities = 109/205 (53%), Positives = 144/205 (70%), Gaps = 2/205 (0%)
Frame = +2
Query: 155 ISIWKHIHSSWKLPPGPFPLPIVGNIFQLDLKNIPKSFTMLAERYGPVFTVYLGSRRIVV 334
+S+W+ KLPPGP PLP++GNI Q+ +K+I KS T L++ YGPVFT+Y G + IVV
Sbjct: 17 LSLWRQSSGRGKLPPGPTPLPVIGNILQIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVV 76
Query: 335 LHGYKAVKEVLLHYKNEFSGRGEIPTFQ-VHKDKGVIFNNGPTWRDTRRFSLTTLRDFGM 511
LHGY+AVKE L+ EFSGRG P + ++ G++F+NG W++ RRFSL TLR+FGM
Sbjct: 77 LHGYEAVKEALIDLGEEFSGRGIFPLAERANRGFGIVFSNGKKWKEIRRFSLMTLRNFGM 136
Query: 512 GKQGNEQRIQREAHFLLEALRKTHGQPFDPTFLIGCAPCNVISDILFRQHFDYNDKTCLR 691
GK+ E R+Q EA L+E LRKT P DPTF++GCAPCNVI I+F + FDY D+ L
Sbjct: 137 GKRSIEDRVQEEARCLVEELRKTKASPCDPTFILGCAPCNVICSIIFHKRFDYKDQQFLN 196
Query: 692 LMSMFNENFYLLSTGWIQV-KHFPP 763
LM NEN +LS+ WIQ+ +F P
Sbjct: 197 LMEKLNENIKILSSPWIQICNNFSP 221
>ref|NP_000753.3| cytochrome P450 2A6 [Homo sapiens].
Length = 494
Score = 192 bits (489), Expect = 3e-49
Identities = 104/211 (49%), Positives = 132/211 (62%), Gaps = 9/211 (4%)
Frame = +2
Query: 155 ISIWKHIHSSWKLPPGPFPLPIVGNIFQLDLKNIPKSFTMLAERYGPVFTVYLGSRRIVV 334
+S+W+ S KLPPGP PLP +GN QL+ + + S ++ERYGPVFT++LG RR+VV
Sbjct: 21 MSVWQQRKSKGKLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVV 80
Query: 335 LHGYKAVKEVLLHYKNEFSGRGEIPTFQ-VHKDKGVIFNNGPTWRDTRRFSLTTLRDFGM 511
L G+ AV+E L+ EFSGRGE TF V K GV+F+NG + RRFS+ TLRDFG+
Sbjct: 81 LCGHDAVREALVDQAEEFSGRGEQATFDWVFKGYGVVFSNGERAKQLRRFSIATLRDFGV 140
Query: 512 GKQGNEQRIQREAHFLLEALRKTHGQPFDPTFLIGCAPCNVISDILFRQHFDYNDKTCLR 691
GK+G E+RIQ EA FL++ALR T G DPTF + NVIS I+F FDY DK L
Sbjct: 141 GKRGIEERIQEEAGFLIDALRGTGGANIDPTFFLSRTVSNVISSIVFGDRFDYKDKEFLS 200
Query: 692 LMSMFNENFYLLSTGWIQ--------VKHFP 760
L+ M F ST Q +KH P
Sbjct: 201 LLRMMLGIFQFTSTSTGQLYEMFSSVMKHLP 231
>ref|NP_000757.2| cytochrome P450 2A13 [Homo sapiens].
Length = 494
Score = 192 bits (489), Expect = 3e-49
Identities = 103/211 (48%), Positives = 132/211 (62%), Gaps = 9/211 (4%)
Frame = +2
Query: 155 ISIWKHIHSSWKLPPGPFPLPIVGNIFQLDLKNIPKSFTMLAERYGPVFTVYLGSRRIVV 334
+S+W+ S KLPPGP PLP +GN QL+ + + S ++ERYGPVFT++LG RR+VV
Sbjct: 21 MSVWRQRKSRGKLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVV 80
Query: 335 LHGYKAVKEVLLHYKNEFSGRGEIPTFQ-VHKDKGVIFNNGPTWRDTRRFSLTTLRDFGM 511
L G+ AVKE L+ EFSGRGE TF + K GV F+NG + RRFS+ TLR FG+
Sbjct: 81 LCGHDAVKEALVDQAEEFSGRGEQATFDWLFKGYGVAFSNGERAKQLRRFSIATLRGFGV 140
Query: 512 GKQGNEQRIQREAHFLLEALRKTHGQPFDPTFLIGCAPCNVISDILFRQHFDYNDKTCLR 691
GK+G E+RIQ EA FL++ALR THG DPTF + NVIS I+F FDY DK L
Sbjct: 141 GKRGIEERIQEEAGFLIDALRGTHGANIDPTFFLSRTVSNVISSIVFGDRFDYEDKEFLS 200
Query: 692 LMSMFNENFYLLSTGWIQ--------VKHFP 760
L+ M +F +T Q +KH P
Sbjct: 201 LLRMMLGSFQFTATSTGQLYEMFSSVMKHLP 231
>ref|NP_000755.2| cytochrome P450 2A7 isoform 1 [Homo sapiens].
Length = 494
Score = 190 bits (482), Expect = 2e-48
Identities = 103/211 (48%), Positives = 131/211 (62%), Gaps = 9/211 (4%)
Frame = +2
Query: 155 ISIWKHIHSSWKLPPGPFPLPIVGNIFQLDLKNIPKSFTMLAERYGPVFTVYLGSRRIVV 334
+S+W+ S KLPPGP PLP +GN QL+ ++I S +E YGPVFT++LG RR+VV
Sbjct: 21 MSVWQQRKSRGKLPPGPTPLPFIGNYLQLNTEHICDSIMKFSECYGPVFTIHLGPRRVVV 80
Query: 335 LHGYKAVKEVLLHYKNEFSGRGEIPTFQ-VHKDKGVIFNNGPTWRDTRRFSLTTLRDFGM 511
L G+ AV+E L+ EFSGRGE TF V K GV F+NG + RF++ TLRDFG+
Sbjct: 81 LCGHDAVREALVDQAEEFSGRGEQATFDWVFKGYGVAFSNGERAKQLLRFAIATLRDFGV 140
Query: 512 GKQGNEQRIQREAHFLLEALRKTHGQPFDPTFLIGCAPCNVISDILFRQHFDYNDKTCLR 691
GK+G E+RIQ E+ FL+EA+R THG DPTF + NVIS I+F FDY DK L
Sbjct: 141 GKRGIEERIQEESGFLIEAIRSTHGANIDPTFFLSRTVSNVISSIVFGDRFDYEDKEFLS 200
Query: 692 LMSMFNENFYLLSTGWIQ--------VKHFP 760
L+SM F ST Q +KH P
Sbjct: 201 LLSMMLGIFQFTSTSTGQLYEMFSSVMKHLP 231
>ref|NP_000765.2| cytochrome P450 2F1 [Homo sapiens].
Length = 491
Score = 186 bits (471), Expect = 4e-47
Identities = 91/196 (46%), Positives = 131/196 (66%), Gaps = 1/196 (0%)
Frame = +2
Query: 188 KLPPGPFPLPIVGNIFQLDLKNIPKSFTMLAERYGPVFTVYLGSRRIVVLHGYKAVKEVL 367
KLPPGP PL I+GN+ L +++ S T L++ YG ++TV+LG RR+VVL GY+AVKE L
Sbjct: 29 KLPPGPRPLSILGNLLLLCSQDMLTSLTKLSKEYGSMYTVHLGPRRVVVLSGYQAVKEAL 88
Query: 368 LHYKNEFSGRGEIPTF-QVHKDKGVIFNNGPTWRDTRRFSLTTLRDFGMGKQGNEQRIQR 544
+ EFSGRG+ P F K G+ F++G W+ R+FS+ LR+FGMGK+ E+RI
Sbjct: 89 VDQGEEFSGRGDYPAFFNFTKGNGIAFSSGDRWKVLRQFSIQILRNFGMGKRSIEERILE 148
Query: 545 EAHFLLEALRKTHGQPFDPTFLIGCAPCNVISDILFRQHFDYNDKTCLRLMSMFNENFYL 724
E FLL LRKT G+PFDPTF++ + N+I +LF FDY+D+ L ++ + N+NF +
Sbjct: 149 EGSFLLAELRKTEGEPFDPTFVLSRSVSNIICSVLFGSRFDYDDERLLTIIRLINDNFQI 208
Query: 725 LSTGWIQVKHFPPSCL 772
+S+ W ++ PS L
Sbjct: 209 MSSPWGELYDIFPSLL 224
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 43,272,305
Number of extensions: 1293736
Number of successful extensions: 4343
Number of sequences better than 1.0e-05: 26
Number of HSP's gapped: 4295
Number of HSP's successfully gapped: 26
Length of query: 332
Length of database: 18,297,164
Length adjustment: 103
Effective length of query: 229
Effective length of database: 14,901,872
Effective search space: 3412528688
Effective search space used: 3412528688
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007013
(996 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_067257.1| cytochrome P450 2E1 [Mus musculus]. 340 1e-93
Alignment gi|NP_001161377.1| cytochrome P450, family 2, subfamily c, poly... 236 2e-62
Alignment gi|NP_001001446.3| cytochrome P450, family 2, subfamily c, poly... 236 2e-62
Alignment gi|NP_001161349.1| cytochrome P450 2C50 isoform 3 [Mus musculus]. 233 1e-61
Alignment gi|NP_598905.2| cytochrome P450 2C50 isoform 1 [Mus musculus]. 231 5e-61
Alignment gi|NP_031841.3| cytochrome P450 2C29 [Mus musculus]. 231 5e-61
Alignment gi|NP_034133.2| cytochrome P450 2C39 [Mus musculus]. 230 1e-60
Alignment gi|NP_001161347.1| cytochrome P450 2C50 isoform 2 [Mus musculus]. 230 1e-60
Alignment gi|NP_034131.2| cytochrome P450 2C37 [Mus musculus]. 228 6e-60
Alignment gi|NP_034132.2| cytochrome P450 2C38 [Mus musculus]. 228 6e-60
>ref|NP_067257.1| cytochrome P450 2E1 [Mus musculus].
Length = 493
Score = 340 bits (872), Expect = 1e-93
Identities = 158/220 (71%), Positives = 183/220 (83%)
Frame = +2
Query: 98 MTALGIXXXXXXXXXXXXXISIWKHIHSSWKLPPGPFPLPIVGNIFQLDLKNIPKSFTML 277
M LGI +SIWK I+ SW LPPGPFP+P GNIFQLDLK+IPKS T L
Sbjct: 1 MAVLGITVALLVWIATLLLVSIWKQIYRSWNLPPGPFPIPFFGNIFQLDLKDIPKSLTKL 60
Query: 278 AERYGPVFTVYLGSRRIVVLHGYKAVKEVLLHYKNEFSGRGEIPTFQVHKDKGVIFNNGP 457
A+R+GPVFT++LG RRIVVLHGYKAVKEVLL++KNEFSGRG+IP FQ +K+KG+IFNNGP
Sbjct: 61 AKRFGPVFTLHLGQRRIVVLHGYKAVKEVLLNHKNEFSGRGDIPVFQEYKNKGIIFNNGP 120
Query: 458 TWRDTRRFSLTTLRDFGMGKQGNEQRIQREAHFLLEALRKTHGQPFDPTFLIGCAPCNVI 637
TW+D RRFSL+ LRD+GMGKQGNE RIQREAHFL+E L+KT GQPFDPTFLIGCAPCNVI
Sbjct: 121 TWKDVRRFSLSILRDWGMGKQGNEARIQREAHFLVEELKKTKGQPFDPTFLIGCAPCNVI 180
Query: 638 SDILFRQHFDYNDKTCLRLMSMFNENFYLLSTGWIQVKHF 757
+DILF + FDY+DK CL LMS+FNENFYLLST WIQ ++
Sbjct: 181 ADILFNKRFDYDDKKCLELMSLFNENFYLLSTPWIQAYNY 220
>ref|NP_001161377.1| cytochrome P450, family 2, subfamily c, polypeptide 44 isoform 2
[Mus musculus].
Length = 456
Score = 236 bits (603), Expect = 2e-62
Identities = 111/207 (53%), Positives = 147/207 (71%), Gaps = 1/207 (0%)
Frame = +2
Query: 155 ISIWKHIHSSWKLPPGPFPLPIVGNIFQLDLKNIPKSFTMLAERYGPVFTVYLGSRRIVV 334
+S+W + + +LPPGP PLPI+GNI QLDLK+IP S + LA+ YGPV+T+Y GS VV
Sbjct: 21 LSVWTKMRTGGRLPPGPTPLPIIGNILQLDLKDIPASLSKLAKEYGPVYTLYFGSWPTVV 80
Query: 335 LHGYKAVKEVLLHYKNEFSGRGEIPTFQ-VHKDKGVIFNNGPTWRDTRRFSLTTLRDFGM 511
LHGY VKE LL+ +EF GRG +P + K G++F+ G W+ RRFSL TL++FGM
Sbjct: 81 LHGYDVVKEALLNQGDEFLGRGPLPIIEDSQKGHGIVFSEGERWKLLRRFSLMTLKNFGM 140
Query: 512 GKQGNEQRIQREAHFLLEALRKTHGQPFDPTFLIGCAPCNVISDILFRQHFDYNDKTCLR 691
GK+ E+R+Q EA L+E L KT QPFDPTF++ CAPCNVI ILF + F YNDKT L
Sbjct: 141 GKRSLEERVQEEARCLVEELHKTEAQPFDPTFILACAPCNVICSILFNERFPYNDKTFLN 200
Query: 692 LMSMFNENFYLLSTGWIQVKHFPPSCL 772
LM + N+NFY L++ WIQ+ + P+ +
Sbjct: 201 LMDLLNKNFYQLNSIWIQMYNLWPTIM 227
>ref|NP_001001446.3| cytochrome P450, family 2, subfamily c, polypeptide 44 isoform 1
[Mus musculus].
Length = 494
Score = 236 bits (603), Expect = 2e-62
Identities = 111/207 (53%), Positives = 147/207 (71%), Gaps = 1/207 (0%)
Frame = +2
Query: 155 ISIWKHIHSSWKLPPGPFPLPIVGNIFQLDLKNIPKSFTMLAERYGPVFTVYLGSRRIVV 334
+S+W + + +LPPGP PLPI+GNI QLDLK+IP S + LA+ YGPV+T+Y GS VV
Sbjct: 21 LSVWTKMRTGGRLPPGPTPLPIIGNILQLDLKDIPASLSKLAKEYGPVYTLYFGSWPTVV 80
Query: 335 LHGYKAVKEVLLHYKNEFSGRGEIPTFQ-VHKDKGVIFNNGPTWRDTRRFSLTTLRDFGM 511
LHGY VKE LL+ +EF GRG +P + K G++F+ G W+ RRFSL TL++FGM
Sbjct: 81 LHGYDVVKEALLNQGDEFLGRGPLPIIEDSQKGHGIVFSEGERWKLLRRFSLMTLKNFGM 140
Query: 512 GKQGNEQRIQREAHFLLEALRKTHGQPFDPTFLIGCAPCNVISDILFRQHFDYNDKTCLR 691
GK+ E+R+Q EA L+E L KT QPFDPTF++ CAPCNVI ILF + F YNDKT L
Sbjct: 141 GKRSLEERVQEEARCLVEELHKTEAQPFDPTFILACAPCNVICSILFNERFPYNDKTFLN 200
Query: 692 LMSMFNENFYLLSTGWIQVKHFPPSCL 772
LM + N+NFY L++ WIQ+ + P+ +
Sbjct: 201 LMDLLNKNFYQLNSIWIQMYNLWPTIM 227
>ref|NP_001161349.1| cytochrome P450 2C50 isoform 3 [Mus musculus].
Length = 217
Score = 233 bits (595), Expect = 1e-61
Identities = 109/200 (54%), Positives = 146/200 (73%), Gaps = 1/200 (0%)
Frame = +2
Query: 155 ISIWKHIHSSWKLPPGPFPLPIVGNIFQLDLKNIPKSFTMLAERYGPVFTVYLGSRRIVV 334
+S+W+ KLPPGP PLPI+GNI Q+++K+I +SFT L++ YGPV+T+YLG + VV
Sbjct: 17 LSLWRQSSERGKLPPGPTPLPIIGNILQINVKDICQSFTNLSKVYGPVYTLYLGRKPTVV 76
Query: 335 LHGYKAVKEVLLHYKNEFSGRGEIPTF-QVHKDKGVIFNNGPTWRDTRRFSLTTLRDFGM 511
LHGY+AVKE L+ + EF+GRG +P F + G+IF+ G W++TRRFSLTTLR+ GM
Sbjct: 77 LHGYEAVKEALVDHGEEFAGRGRLPVFDKATNGMGIIFSKGNVWKNTRRFSLTTLRNLGM 136
Query: 512 GKQGNEQRIQREAHFLLEALRKTHGQPFDPTFLIGCAPCNVISDILFRQHFDYNDKTCLR 691
GK+ E R+Q EA L+E LRKT+G P DPTF++GCAPCNVI I+F+ FDY D+ L
Sbjct: 137 GKRSIEDRVQEEARCLVEELRKTNGSPCDPTFILGCAPCNVICSIIFQDRFDYKDRDFLN 196
Query: 692 LMSMFNENFYLLSTGWIQVK 751
LM NE ++ST W+QVK
Sbjct: 197 LMEKLNEITKIMSTPWLQVK 216
>ref|NP_598905.2| cytochrome P450 2C50 isoform 1 [Mus musculus].
Length = 490
Score = 231 bits (590), Expect = 5e-61
Identities = 108/199 (54%), Positives = 145/199 (72%), Gaps = 1/199 (0%)
Frame = +2
Query: 155 ISIWKHIHSSWKLPPGPFPLPIVGNIFQLDLKNIPKSFTMLAERYGPVFTVYLGSRRIVV 334
+S+W+ KLPPGP PLPI+GNI Q+++K+I +SFT L++ YGPV+T+YLG + VV
Sbjct: 17 LSLWRQSSERGKLPPGPTPLPIIGNILQINVKDICQSFTNLSKVYGPVYTLYLGRKPTVV 76
Query: 335 LHGYKAVKEVLLHYKNEFSGRGEIPTF-QVHKDKGVIFNNGPTWRDTRRFSLTTLRDFGM 511
LHGY+AVKE L+ + EF+GRG +P F + G+IF+ G W++TRRFSLTTLR+ GM
Sbjct: 77 LHGYEAVKEALVDHGEEFAGRGRLPVFDKATNGMGIIFSKGNVWKNTRRFSLTTLRNLGM 136
Query: 512 GKQGNEQRIQREAHFLLEALRKTHGQPFDPTFLIGCAPCNVISDILFRQHFDYNDKTCLR 691
GK+ E R+Q EA L+E LRKT+G P DPTF++GCAPCNVI I+F+ FDY D+ L
Sbjct: 137 GKRSIEDRVQEEARCLVEELRKTNGSPCDPTFILGCAPCNVICSIIFQDRFDYKDRDFLN 196
Query: 692 LMSMFNENFYLLSTGWIQV 748
LM NE ++ST W+QV
Sbjct: 197 LMEKLNEITKIMSTPWLQV 215
>ref|NP_031841.3| cytochrome P450 2C29 [Mus musculus].
Length = 490
Score = 231 bits (590), Expect = 5e-61
Identities = 110/207 (53%), Positives = 145/207 (70%), Gaps = 1/207 (0%)
Frame = +2
Query: 155 ISIWKHIHSSWKLPPGPFPLPIVGNIFQLDLKNIPKSFTMLAERYGPVFTVYLGSRRIVV 334
+S+W+ KLPPGP PLPI+GN Q+D+KNI +SFT ++ YGPVFT+YLGS+ V+
Sbjct: 17 LSLWRQSSGRGKLPPGPTPLPIIGNFLQIDVKNISQSFTNFSKAYGPVFTLYLGSKPTVI 76
Query: 335 LHGYKAVKEVLLHYKNEFSGRGEIPTFQ-VHKDKGVIFNNGPTWRDTRRFSLTTLRDFGM 511
LHGY+AVKE L+ EF+GRG P + + K GV+F+NG W++ RRF+L TLR+ GM
Sbjct: 77 LHGYEAVKEALIDRGEEFAGRGSFPMAEKIIKGFGVVFSNGNRWKEMRRFTLMTLRNLGM 136
Query: 512 GKQGNEQRIQREAHFLLEALRKTHGQPFDPTFLIGCAPCNVISDILFRQHFDYNDKTCLR 691
GK+ E R+Q EA L+E LRKT G P DPTF++ CAPCNVI I+F+ FDY DK L
Sbjct: 137 GKRNIEDRVQEEAQCLVEELRKTKGSPCDPTFILSCAPCNVICSIIFQNRFDYKDKEFLI 196
Query: 692 LMSMFNENFYLLSTGWIQVKHFPPSCL 772
LM NEN +LS+ W+QV + PS +
Sbjct: 197 LMDKINENVKILSSPWLQVCNSFPSLI 223
>ref|NP_034133.2| cytochrome P450 2C39 [Mus musculus].
Length = 490
Score = 230 bits (587), Expect = 1e-60
Identities = 108/204 (52%), Positives = 143/204 (70%), Gaps = 2/204 (0%)
Frame = +2
Query: 155 ISIWKHIHSSWKLPPGPFPLPIVGNIFQLDLKNIPKSFTMLAERYGPVFTVYLGSRRIVV 334
+S+W+ LPPGP P PI+GN Q+D+KN+ +S T ++ YGPVFT+YLGSR VV
Sbjct: 17 LSLWRQSCGRGSLPPGPTPFPIIGNFLQIDIKNVSQSLTNFSKAYGPVFTLYLGSRPTVV 76
Query: 335 LHGYKAVKEVLLHYKNEFSGRGEIPTFQ-VHKDKGVIFNNGPTWRDTRRFSLTTLRDFGM 511
LHGY+AVKE L+ + EFS RG IP + ++ G++F+NG W++ RRF+LTTLR+ GM
Sbjct: 77 LHGYEAVKEALIDHGEEFSDRGSIPMVEKINNGLGIVFSNGNRWKEIRRFTLTTLRNLGM 136
Query: 512 GKQGNEQRIQREAHFLLEALRKTHGQPFDPTFLIGCAPCNVISDILFRQHFDYNDKTCLR 691
GK+ E R+Q EA L+E LRKT G P DPTF++ CAPCNVI I+F+ FDY DK L
Sbjct: 137 GKRNIEDRVQEEAQCLVEELRKTKGSPCDPTFILSCAPCNVICSIIFQDRFDYKDKDFLM 196
Query: 692 LMSMFNENFYLLSTGWIQV-KHFP 760
LM NEN +LS+ W+QV +FP
Sbjct: 197 LMEKLNENVKILSSPWLQVCNNFP 220
>ref|NP_001161347.1| cytochrome P450 2C50 isoform 2 [Mus musculus].
Length = 431
Score = 230 bits (586), Expect = 1e-60
Identities = 107/198 (54%), Positives = 144/198 (72%), Gaps = 1/198 (0%)
Frame = +2
Query: 155 ISIWKHIHSSWKLPPGPFPLPIVGNIFQLDLKNIPKSFTMLAERYGPVFTVYLGSRRIVV 334
+S+W+ KLPPGP PLPI+GNI Q+++K+I +SFT L++ YGPV+T+YLG + VV
Sbjct: 17 LSLWRQSSERGKLPPGPTPLPIIGNILQINVKDICQSFTNLSKVYGPVYTLYLGRKPTVV 76
Query: 335 LHGYKAVKEVLLHYKNEFSGRGEIPTF-QVHKDKGVIFNNGPTWRDTRRFSLTTLRDFGM 511
LHGY+AVKE L+ + EF+GRG +P F + G+IF+ G W++TRRFSLTTLR+ GM
Sbjct: 77 LHGYEAVKEALVDHGEEFAGRGRLPVFDKATNGMGIIFSKGNVWKNTRRFSLTTLRNLGM 136
Query: 512 GKQGNEQRIQREAHFLLEALRKTHGQPFDPTFLIGCAPCNVISDILFRQHFDYNDKTCLR 691
GK+ E R+Q EA L+E LRKT+G P DPTF++GCAPCNVI I+F+ FDY D+ L
Sbjct: 137 GKRSIEDRVQEEARCLVEELRKTNGSPCDPTFILGCAPCNVICSIIFQDRFDYKDRDFLN 196
Query: 692 LMSMFNENFYLLSTGWIQ 745
LM NE ++ST W+Q
Sbjct: 197 LMEKLNEITKIMSTPWLQ 214
>ref|NP_034131.2| cytochrome P450 2C37 [Mus musculus].
Length = 490
Score = 228 bits (581), Expect = 6e-60
Identities = 108/207 (52%), Positives = 146/207 (70%), Gaps = 1/207 (0%)
Frame = +2
Query: 155 ISIWKHIHSSWKLPPGPFPLPIVGNIFQLDLKNIPKSFTMLAERYGPVFTVYLGSRRIVV 334
+S+W+ KLPPGP PLPI+GNI Q+D+K+I +SFT L++ YGPV+T+YLG + VV
Sbjct: 17 LSLWRQSSERGKLPPGPTPLPIIGNILQIDVKDICQSFTNLSKVYGPVYTLYLGRKPTVV 76
Query: 335 LHGYKAVKEVLLHYKNEFSGRGEIPTF-QVHKDKGVIFNNGPTWRDTRRFSLTTLRDFGM 511
LHGY+AVKE L+ + EF+GRG P F + G+ F+ G W++TRRFSL TLR+ GM
Sbjct: 77 LHGYEAVKEALVDHGEEFAGRGRFPVFDKATNGMGLAFSKGNVWKNTRRFSLMTLRNLGM 136
Query: 512 GKQGNEQRIQREAHFLLEALRKTHGQPFDPTFLIGCAPCNVISDILFRQHFDYNDKTCLR 691
GK+ E R+Q EA L+E LRKT+G P DPTF++GCAPCNVI I+F+ FDY D+ L
Sbjct: 137 GKRSIEDRVQEEARCLVEELRKTNGSPCDPTFILGCAPCNVICSIIFQDRFDYKDRDFLN 196
Query: 692 LMSMFNENFYLLSTGWIQVKHFPPSCL 772
LM NE +LS+ W+Q+ + P+ L
Sbjct: 197 LMEKLNEITKILSSPWLQICNTYPALL 223
>ref|NP_034132.2| cytochrome P450 2C38 [Mus musculus].
Length = 490
Score = 228 bits (581), Expect = 6e-60
Identities = 108/204 (52%), Positives = 144/204 (70%), Gaps = 2/204 (0%)
Frame = +2
Query: 155 ISIWKHIHSSWKLPPGPFPLPIVGNIFQLDLKNIPKSFTMLAERYGPVFTVYLGSRRIVV 334
+S+W+ +LPPGP P PI+GN Q+D+KN +S T ++ YGPVFT+YLGSR IVV
Sbjct: 17 LSLWRQRSRRGRLPPGPTPFPIIGNFLQIDVKNFNQSLTNFSKTYGPVFTLYLGSRPIVV 76
Query: 335 LHGYKAVKEVLLHYKNEFSGRGEIPTFQ-VHKDKGVIFNNGPTWRDTRRFSLTTLRDFGM 511
LHGY+AVKE L+ + EFSGR IP + ++ G+ F+NG +W++TRRF+L TLR+ GM
Sbjct: 77 LHGYEAVKEALIDHGEEFSGRENIPMSEKINNGLGITFSNGNSWKETRRFTLMTLRNLGM 136
Query: 512 GKQGNEQRIQREAHFLLEALRKTHGQPFDPTFLIGCAPCNVISDILFRQHFDYNDKTCLR 691
GK+ E R++ EA L+E LRKT G P DPTF++ CAPCNVI I+F+ FDY DK L
Sbjct: 137 GKRNIEDRVREEAQCLVEELRKTKGSPCDPTFILSCAPCNVICSIIFQDRFDYKDKDFLM 196
Query: 692 LMSMFNENFYLLSTGWIQV-KHFP 760
LM NEN +LS+ W+QV +FP
Sbjct: 197 LMKKLNENVKILSSPWLQVCNNFP 220
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 36,554,116
Number of extensions: 1076865
Number of successful extensions: 3593
Number of sequences better than 1.0e-05: 58
Number of HSP's gapped: 3523
Number of HSP's successfully gapped: 58
Length of query: 332
Length of database: 15,617,559
Length adjustment: 102
Effective length of query: 230
Effective length of database: 12,553,887
Effective search space: 2887394010
Effective search space used: 2887394010
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007013
(996 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_999586.1| cytochrome P450 2E1 [Sus scrofa]. 423 e-119
Alignment gi|NP_999579.1| cytochrome P450 2C33 [Sus scrofa]. 236 2e-62
Alignment gi|XP_003359352.1| PREDICTED: LOW QUALITY PROTEIN: cytochrome P... 235 3e-62
Alignment gi|NP_999585.1| cytochrome P450 2C49 [Sus scrofa]. 233 1e-61
Alignment gi|NP_001161307.1| cytochrome P450 2C42 [Sus scrofa]. 232 2e-61
Alignment gi|XP_003127188.2| PREDICTED: cytochrome P450 2G1-like isoform ... 202 3e-52
Alignment gi|NP_999582.1| cytochrome P450 2A19 [Sus scrofa]. 189 3e-48
Alignment gi|NP_999578.1| cytochrome P450 2B22 [Sus scrofa]. 179 3e-45
Alignment gi|XP_003360779.1| PREDICTED: cytochrome P450 2J2-like, partial... 153 2e-37
Alignment gi|XP_003124302.1| PREDICTED: cytochrome P450 2W1-like [Sus scr... 142 4e-34
>ref|NP_999586.1| cytochrome P450 2E1 [Sus scrofa].
Length = 495
Score = 423 bits (1087), Expect = e-119
Identities = 203/217 (93%), Positives = 204/217 (94%)
Frame = +2
Query: 98 MTALGIXXXXXXXXXXXXXISIWKHIHSSWKLPPGPFPLPIVGNIFQLDLKNIPKSFTML 277
MTALGI ISIWKHIHSSWKLPPGPFPLPIVGNIFQLDLKNIPKSFTML
Sbjct: 1 MTALGITVALLVWLVTLLLISIWKHIHSSWKLPPGPFPLPIVGNIFQLDLKNIPKSFTML 60
Query: 278 AERYGPVFTVYLGSRRIVVLHGYKAVKEVLLHYKNEFSGRGEIPTFQVHKDKGVIFNNGP 457
AERYGPVFTVYLGSRRIVVLHGYKAVKEVLLHYKNEFSGRGEIPTFQVHKDKGVIFNNGP
Sbjct: 61 AERYGPVFTVYLGSRRIVVLHGYKAVKEVLLHYKNEFSGRGEIPTFQVHKDKGVIFNNGP 120
Query: 458 TWRDTRRFSLTTLRDFGMGKQGNEQRIQREAHFLLEALRKTHGQPFDPTFLIGCAPCNVI 637
TWRDTRRFSLTTLRDFGMGKQGNEQRIQREAHFLLEALRKTHGQPFDPTFLIGCAPCNVI
Sbjct: 121 TWRDTRRFSLTTLRDFGMGKQGNEQRIQREAHFLLEALRKTHGQPFDPTFLIGCAPCNVI 180
Query: 638 SDILFRQHFDYNDKTCLRLMSMFNENFYLLSTGWIQV 748
SDILFRQHFDYNDKTCLRLMSMFNENFYLLSTGWIQ+
Sbjct: 181 SDILFRQHFDYNDKTCLRLMSMFNENFYLLSTGWIQL 217
>ref|NP_999579.1| cytochrome P450 2C33 [Sus scrofa].
Length = 494
Score = 236 bits (601), Expect = 2e-62
Identities = 112/207 (54%), Positives = 147/207 (71%), Gaps = 1/207 (0%)
Frame = +2
Query: 155 ISIWKHIHSSWKLPPGPFPLPIVGNIFQLDLKNIPKSFTMLAERYGPVFTVYLGSRRIVV 334
+S+WK H +LPPGP PLPI+GN+ QL+LK+IP S + LA++YGPV TVY GS+ VV
Sbjct: 21 LSVWKKNHKRRRLPPGPTPLPIIGNLMQLNLKDIPASLSKLAKQYGPVCTVYFGSQPAVV 80
Query: 335 LHGYKAVKEVLLHYKNEFSGRGEIPTFQ-VHKDKGVIFNNGPTWRDTRRFSLTTLRDFGM 511
LHGY+AVKE L+ +EF GRG IP G++F+NG W+ RRFSL TLR+FGM
Sbjct: 81 LHGYEAVKEALIDQGDEFLGRGIIPIIDDTQGGYGLVFSNGERWKQIRRFSLMTLRNFGM 140
Query: 512 GKQGNEQRIQREAHFLLEALRKTHGQPFDPTFLIGCAPCNVISDILFRQHFDYNDKTCLR 691
GK+ E+R+Q EA FL+E LRKT QPFDPTF++ CAPCNVI ILF F Y+++T L
Sbjct: 141 GKRSLEERVQEEAQFLVEELRKTEAQPFDPTFILSCAPCNVICSILFNDRFHYDNETFLS 200
Query: 692 LMSMFNENFYLLSTGWIQVKHFPPSCL 772
LM++ N NF +S+ WIQ+ + P +
Sbjct: 201 LMNLLNANFRQISSPWIQIYNLWPQII 227
>ref|XP_003359352.1| PREDICTED: LOW QUALITY PROTEIN: cytochrome P450 2C18 [Sus scrofa].
Length = 490
Score = 235 bits (599), Expect = 3e-62
Identities = 114/204 (55%), Positives = 149/204 (73%), Gaps = 2/204 (0%)
Frame = +2
Query: 155 ISIWKHIHSSWKLPPGPFPLPIVGNIFQLDLKNIPKSFTMLAERYGPVFTVYLGSRRIVV 334
+S+WK +LPPGP PLPI+GNI QL++K+I KS + L++ YGPVFTVYLG + VV
Sbjct: 17 LSLWKQNSGKGRLPPGPTPLPILGNILQLNVKDISKSLSNLSKVYGPVFTVYLGLKPAVV 76
Query: 335 LHGYKAVKEVLLHYKNEFSGRGEIPTFQ-VHKDKGVIFNNGPTWRDTRRFSLTTLRDFGM 511
LHGY+A+KE L+ EFSGRG +P + V+K G+IF++G W++ RRFSL TLR+FGM
Sbjct: 77 LHGYEAMKEALIDGGEEFSGRGHLPMAERVNKGHGIIFSSGKRWKEIRRFSLMTLRNFGM 136
Query: 512 GKQGNEQRIQREAHFLLEALRKTHGQPFDPTFLIGCAPCNVISDILFRQHFDYNDKTCLR 691
GK+ E+R+Q EA L+E LRKT+ P+DPTFL+GCAPC VI I+FR FDY D L
Sbjct: 137 GKRSIEERVQEEARCLVEELRKTNASPWDPTFLLGCAPCKVICSIIFRNRFDYTDPNFLT 196
Query: 692 LMSMFNENFYLLSTGWIQV-KHFP 760
L+ NENF +LS+ WIQV +FP
Sbjct: 197 LLEKLNENFRILSSPWIQVCNNFP 220
>ref|NP_999585.1| cytochrome P450 2C49 [Sus scrofa].
Length = 490
Score = 233 bits (594), Expect = 1e-61
Identities = 114/204 (55%), Positives = 146/204 (71%), Gaps = 2/204 (0%)
Frame = +2
Query: 155 ISIWKHIHSSWKLPPGPFPLPIVGNIFQLDLKNIPKSFTMLAERYGPVFTVYLGSRRIVV 334
+S+WK +LPPGP PL I+GNI QLD+K+I KS + L++ YGPVFTVY G + VV
Sbjct: 17 LSLWKQNSGKGRLPPGPTPLSILGNILQLDVKDISKSLSNLSKVYGPVFTVYFGLKPAVV 76
Query: 335 LHGYKAVKEVLLHYKNEFSGRGEIPTFQ-VHKDKGVIFNNGPTWRDTRRFSLTTLRDFGM 511
LHGY+AVKE L+ EFSGRG P + V+K G+IF++G W++TRRFSL TLR+FGM
Sbjct: 77 LHGYEAVKEALIDGGEEFSGRGHFPMAERVNKGHGIIFSSGKRWKETRRFSLMTLRNFGM 136
Query: 512 GKQGNEQRIQREAHFLLEALRKTHGQPFDPTFLIGCAPCNVISDILFRQHFDYNDKTCLR 691
GK+ E+R+Q EA L+E LRKT+ P DPTFL+GCAPCNVI I+F FDY D L
Sbjct: 137 GKRSIEERVQEEARCLVEELRKTNASPCDPTFLLGCAPCNVICSIIFHNRFDYTDPNFLT 196
Query: 692 LMSMFNENFYLLSTGWIQV-KHFP 760
L+ NENF +LS+ W+QV +FP
Sbjct: 197 LLEKLNENFRILSSPWMQVCNNFP 220
>ref|NP_001161307.1| cytochrome P450 2C42 [Sus scrofa].
Length = 490
Score = 232 bits (592), Expect = 2e-61
Identities = 115/204 (56%), Positives = 144/204 (70%), Gaps = 2/204 (0%)
Frame = +2
Query: 155 ISIWKHIHSSWKLPPGPFPLPIVGNIFQLDLKNIPKSFTMLAERYGPVFTVYLGSRRIVV 334
+S+WK +LPPGP PLPI+GNI QLD+KNI KS + LAE YGPVFTVY G + VV
Sbjct: 17 LSLWKESSGKGELPPGPTPLPILGNILQLDVKNISKSLSNLAEVYGPVFTVYFGIKPTVV 76
Query: 335 LHGYKAVKEVLLHYKNEFSGRGEIPTFQ-VHKDKGVIFNNGPTWRDTRRFSLTTLRDFGM 511
L+GY+AVKE L+ EFSGRG P + HK G+IF+NG W++ RRFSL TLR+ GM
Sbjct: 77 LYGYEAVKEALVDLGEEFSGRGHFPVAEKTHKGLGIIFSNGKKWKEIRRFSLMTLRNLGM 136
Query: 512 GKQGNEQRIQREAHFLLEALRKTHGQPFDPTFLIGCAPCNVISDILFRQHFDYNDKTCLR 691
GK+ E RIQ EA L+E LRKT+ P DPTF++ CAPCNVI I+F+ FDY D+ L
Sbjct: 137 GKRSIEDRIQEEACCLVEELRKTNASPCDPTFILDCAPCNVICSIIFQNRFDYTDQDFLT 196
Query: 692 LMSMFNENFYLLSTGWIQV-KHFP 760
L+ F+EN +LS+ WIQV +FP
Sbjct: 197 LLEKFHENLNILSSPWIQVCNNFP 220
>ref|XP_003127188.2| PREDICTED: cytochrome P450 2G1-like isoform 1 [Sus scrofa].
Length = 549
Score = 202 bits (513), Expect = 3e-52
Identities = 104/199 (52%), Positives = 131/199 (65%), Gaps = 4/199 (2%)
Frame = +2
Query: 164 WKHIHSSWKLPPGPFPLPIVGNIFQLDLKNIPKSFTMLAERYGPVFTVYLGSRRIVVLHG 343
WK I KLPPGP P+P +GN+ Q+ +SF L E+YGPVFTVY+G R +VVL G
Sbjct: 24 WKRISKGGKLPPGPTPIPFLGNLLQVRTDATFQSFMKLREKYGPVFTVYMGPRPVVVLCG 83
Query: 344 YKAVKEVLLHYKNEFSGRGEIPT----FQVHKDKGVIFNNGPTWRDTRRFSLTTLRDFGM 511
++AVKE L+ +EFSGRGE+ + FQ H GV NG WR RRFSLT LRDFGM
Sbjct: 84 HEAVKEALIDRADEFSGRGELASVERNFQGH---GVALANGDRWRILRRFSLTILRDFGM 140
Query: 512 GKQGNEQRIQREAHFLLEALRKTHGQPFDPTFLIGCAPCNVISDILFRQHFDYNDKTCLR 691
GK+ E+RIQ EA FLL+ LRKT G P +PTF + NVIS ++F FDY DK L+
Sbjct: 141 GKRSIEERIQEEAGFLLQELRKTKGAPIEPTFFLSRTVSNVISSVVFGSRFDYEDKQFLK 200
Query: 692 LMSMFNENFYLLSTGWIQV 748
L+ M N++F +ST W Q+
Sbjct: 201 LLQMINQSFIEMSTPWAQL 219
>ref|NP_999582.1| cytochrome P450 2A19 [Sus scrofa].
Length = 494
Score = 189 bits (479), Expect = 3e-48
Identities = 103/211 (48%), Positives = 130/211 (61%), Gaps = 9/211 (4%)
Frame = +2
Query: 155 ISIWKHIHSSWKLPPGPFPLPIVGNIFQLDLKNIPKSFTMLAERYGPVFTVYLGSRRIVV 334
+S+W+ KLPPGP PLP +GN QL+ + + S +++RYGPVFTV+LG RRIVV
Sbjct: 21 MSVWRQRKLQGKLPPGPTPLPFIGNYLQLNTEQMYNSLMKISQRYGPVFTVHLGPRRIVV 80
Query: 335 LHGYKAVKEVLLHYKNEFSGRGEIPTFQ-VHKDKGVIFNNGPTWRDTRRFSLTTLRDFGM 511
L GY AVKE L+ EFSGRGE TF + K GV F+NG + RRFS+TTLRDFG+
Sbjct: 81 LCGYDAVKEALVDQAEEFSGRGEQATFDWLFKGYGVAFSNGERAKQLRRFSITTLRDFGV 140
Query: 512 GKQGNEQRIQREAHFLLEALRKTHGQPFDPTFLIGCAPCNVISDILFRQHFDYNDKTCLR 691
GK+G E+RIQ EA L+EA R T G DPT+ + NVIS I+F FDY DK L
Sbjct: 141 GKRGIEERIQEEAGHLIEAFRGTRGAFIDPTYFLSRTVSNVISSIVFGDRFDYEDKEFLA 200
Query: 692 LMSMFNENFYLLSTGWIQ--------VKHFP 760
L+ M +F +T Q +KH P
Sbjct: 201 LLRMMLGSFQFTATSTGQLYEMFYSVMKHLP 231
>ref|NP_999578.1| cytochrome P450 2B22 [Sus scrofa].
Length = 493
Score = 179 bits (453), Expect = 3e-45
Identities = 90/192 (46%), Positives = 123/192 (64%), Gaps = 1/192 (0%)
Frame = +2
Query: 161 IWKHIHSSWKLPPGPFPLPIVGNIFQLDLKNIPKSFTMLAERYGPVFTVYLGSRRIVVLH 340
+W H S LPPGP PLP +GNI Q+D K KSF L ERYG VFTVYLG R +V++
Sbjct: 19 LWGHPSSQGHLPPGPRPLPFLGNILQMDRKGFLKSFQALRERYGDVFTVYLGPRPVVMIC 78
Query: 341 GYKAVKEVLLHYKNEFSGRGEIPTFQ-VHKDKGVIFNNGPTWRDTRRFSLTTLRDFGMGK 517
G +A++E L+ FSGRG+I + + + GVIF+NG W+ RRFSL T+RDFG+GK
Sbjct: 79 GTEAIREALVDQAEAFSGRGKIAVVEPIFQGYGVIFSNGERWKTLRRFSLATMRDFGLGK 138
Query: 518 QGNEQRIQREAHFLLEALRKTHGQPFDPTFLIGCAPCNVISDILFRQHFDYNDKTCLRLM 697
+ E+RIQ EA L+E LRK+ G DPT+ + N+I I+F + F Y D L+L+
Sbjct: 139 RSVEERIQEEAQCLVEELRKSQGALQDPTYYFHSSTANIICSIVFGKRFAYRDPEFLQLL 198
Query: 698 SMFNENFYLLST 733
+ + F L+S+
Sbjct: 199 DLLFQTFLLISS 210
>ref|XP_003360779.1| PREDICTED: cytochrome P450 2J2-like, partial [Sus scrofa].
Length = 363
Score = 153 bits (386), Expect = 2e-37
Identities = 78/195 (40%), Positives = 119/195 (61%), Gaps = 1/195 (0%)
Frame = +2
Query: 167 KHIHSSWKLPPGPFPLPIVGNIFQLDLKNIPKSFTMLAERYGPVFTVYLGSRRIVVLHGY 346
K I ++ PPGP LP VGN+F LD + S ++YG +F++ L + VV+ G
Sbjct: 5 KDICMNFNYPPGPLRLPFVGNLFHLDFEKAHLSLQRFVKKYGNIFSLDLCALSAVVVTGL 64
Query: 347 KAVKEVLLHYKNEFSGRGEIPTF-QVHKDKGVIFNNGPTWRDTRRFSLTTLRDFGMGKQG 523
+KEVL+H +F+ R +P +V K+KGV+ ++G W++ RRF+LTTLR+FG+GK+
Sbjct: 65 PLIKEVLVHQNQKFANRPILPIQDRVFKNKGVVTSSGQVWKEQRRFTLTTLRNFGLGKKS 124
Query: 524 NEQRIQREAHFLLEALRKTHGQPFDPTFLIGCAPCNVISDILFRQHFDYNDKTCLRLMSM 703
E+RIQ EA +L +A+ + +GQPF+P F I A N+I I F + FDY D L+ +
Sbjct: 125 LEERIQEEAQYLTQAIGEENGQPFNPQFKISNAVSNIICSITFGKRFDYQDDQFQELLRL 184
Query: 704 FNENFYLLSTGWIQV 748
E +L + W Q+
Sbjct: 185 LREVTHLQTLLWCQL 199
>ref|XP_003124302.1| PREDICTED: cytochrome P450 2W1-like [Sus scrofa].
Length = 461
Score = 142 bits (357), Expect = 4e-34
Identities = 75/191 (39%), Positives = 114/191 (59%), Gaps = 1/191 (0%)
Frame = +2
Query: 194 PPGPFPLPIVGNIFQLDLKNIPKSFTMLAERYGPVFTVYLGSRRIVVLHGYKAVKEVLLH 373
PPGP PLP++GN+ L + +SF LA++YGPVFTV+LG +++VVL GY+AV+E L+
Sbjct: 32 PPGPRPLPLIGNLHLLRVSQQDRSFMELAKQYGPVFTVHLGHQKMVVLTGYEAVREALVG 91
Query: 374 YKNEFSGRGEIPTFQ-VHKDKGVIFNNGPTWRDTRRFSLTTLRDFGMGKQGNEQRIQREA 550
+ E +GR I FQ + G+ F++GP WR R+ ++ L G+G+ ++ +E
Sbjct: 92 TRQELAGRPPIAIFQLIQGGGGIFFSSGPRWRAARQLTVRVLHSLGVGRAPVADKVLQEL 151
Query: 551 HFLLEALRKTHGQPFDPTFLIGCAPCNVISDILFRQHFDYNDKTCLRLMSMFNENFYLLS 730
L L G+PF P L+G AP N++ +LF Q FDY D + L+ + +E LL
Sbjct: 152 RCLTGQLDSYGGRPF-PLALLGWAPSNILFALLFGQRFDYRDPVFVSLLGLIDEVMVLLG 210
Query: 731 TGWIQVKHFPP 763
T IQ+ + P
Sbjct: 211 TPSIQLFNICP 221
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 27,305,081
Number of extensions: 826119
Number of successful extensions: 2673
Number of sequences better than 1.0e-05: 26
Number of HSP's gapped: 2639
Number of HSP's successfully gapped: 26
Length of query: 332
Length of database: 11,343,932
Length adjustment: 99
Effective length of query: 233
Effective length of database: 8,879,129
Effective search space: 2068837057
Effective search space used: 2068837057
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007013
(996 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr14 737 0.0
Sscrofa_Chr06 58 1e-05
>Sscrofa_Chr14
|| Length = 153851969
Score = 737 bits (372), Expect = 0.0
Identities = 402/413 (97%), Gaps = 1/413 (0%)
Strand = Plus / Plus
Query: 584 ggccagccctttgatcccaccttcctcatcggctgcgcaccctgcaatgtcatctccgac 643
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153483260 ggccagccctttgatcccaccttcctcatcggctgcgcaccctgcaatgtcatctccgac 153483319
Query: 644 atcctcttccgccagcactttgactacaatgacaagacctgtctgaggttaatgagcatg 703
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153483320 atcctcttccgccagcactttgactacaatgacaagacctgtctgaggttaatgagcatg 153483379
Query: 704 ttcaatgagaacttctacctgctcagtaccggctggatccaggtgaagcactttcctccc 763
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 153483380 ttcaatgagaacttctacctgctcagtactggctggatccaggtgaagcactttcctccc 153483439
Query: 764 tcttgcctggcctgtgcctatcatcggttgatggttcacagcaggagaaggatgagaagg 823
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153483440 tcttgcctggcctgtgcctatcatcggttgatggttcacagcaggagaaggatgagaagg 153483499
Query: 824 ggcattggggtatatggacagataggcatacccacctaggtggcctgcatgtcccttctg 883
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153483500 ggcattggggtatatggacagataggcatacccacctaggtggcctgcatgtcccttctg 153483559
Query: 884 gaaaattccatgggccccacccttcccccttgctaacctcgaacacttagcatttcactc 943
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153483560 gagaattccatgggccccacccttcccccttgctaacctcgaacacttagcatttcactc 153483619
Query: 944 tttaaaatcagtnnnnnnnnaattctgtccccaggtgttttgttcaccattat 996
|||| ||||||| |||||||||||||||||||||||||||||||||
Sbjct: 153483620 tttagaatcagt-cccccccaattctgtccccaggtgttttgttcaccattat 153483671
Score = 543 bits (274), Expect = e-152
Identities = 274/274 (100%)
Strand = Plus / Plus
Query: 1 ttggttggctggtcaccctccttctcaaggatgcattataaaaggctgcctctccacagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153477996 ttggttggctggtcaccctccttctcaaggatgcattataaaaggctgcctctccacagg 153478055
Query: 61 agcatctccacacattgaaagatcccctgaaggagccatgactgccctgggcatcacggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153478056 agcatctccacacattgaaagatcccctgaaggagccatgactgccctgggcatcacggt 153478115
Query: 121 ggccctgctggtgtggttggtcaccctgctgctcatctccatctggaagcacatccacag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153478116 ggccctgctggtgtggttggtcaccctgctgctcatctccatctggaagcacatccacag 153478175
Query: 181 tagctggaaacttccccctggccctttcccactgcccatcgttgggaacattttccagtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153478176 tagctggaaacttccccctggccctttcccactgcccatcgttgggaacattttccagtt 153478235
Query: 241 ggaccttaagaatattcccaaatccttcaccatg 274
||||||||||||||||||||||||||||||||||
Sbjct: 153478236 ggaccttaagaatattcccaaatccttcaccatg 153478269
Score = 321 bits (162), Expect = 4e-85
Identities = 162/162 (100%)
Strand = Plus / Plus
Query: 274 gctggcagagcgttacgggccggtgttcactgtgtacctgggttcgcggcgcattgtggt 333
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153479193 gctggcagagcgttacgggccggtgttcactgtgtacctgggttcgcggcgcattgtggt 153479252
Query: 334 cctgcacggctacaaggccgtgaaggaggtcttgctccactacaagaatgagttctctgg 393
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153479253 cctgcacggctacaaggccgtgaaggaggtcttgctccactacaagaatgagttctctgg 153479312
Query: 394 cagaggggaaatccccacgttccaagtgcacaaggacaaagg 435
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153479313 cagaggggaaatccccacgttccaagtgcacaaggacaaagg 153479354
Score = 303 bits (153), Expect = 1e-79
Identities = 153/153 (100%)
Strand = Plus / Plus
Query: 433 aggggtcattttcaataatggaccaacctggcgggacactcggcggttctccctcaccac 492
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153482825 aggggtcattttcaataatggaccaacctggcgggacactcggcggttctccctcaccac 153482884
Query: 493 cctccgtgacttcgggatggggaaacagggcaatgagcagcggatccagagggaggccca 552
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153482885 cctccgtgacttcgggatggggaaacagggcaatgagcagcggatccagagggaggccca 153482944
Query: 553 cttcctgctggaggcactcaggaagacccatgg 585
|||||||||||||||||||||||||||||||||
Sbjct: 153482945 cttcctgctggaggcactcaggaagacccatgg 153482977
>Sscrofa_Chr06
|| Length = 157765593
Score = 58.0 bits (29), Expect = 1e-05
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 287 tacgggccggtgttcactgtgtacctggg 315
|||||||||||||||||||||||||||||
Sbjct: 44927496 tacgggccggtgttcactgtgtacctggg 44927524
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 28,333,296
Number of extensions: 222
Number of successful extensions: 222
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 222
Number of HSP's successfully gapped: 6
Length of query: 996
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 975
Effective length of database: 2,808,413,156
Effective search space: 2738202827100
Effective search space used: 2738202827100
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 29 (58.0 bits)