Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007016
(1230 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_777219.2| 14-3-3 protein beta/alpha [Bos taurus]. 455 e-128
Alignment gi|NP_777239.1| 14-3-3 protein zeta/delta [Bos taurus]. 403 e-112
Alignment gi|XP_002696287.1| PREDICTED: tyrosine 3/tryptophan 5 -monooxyg... 402 e-112
Alignment gi|XP_002702517.1| PREDICTED: tyrosine 3/tryptophan 5 -monooxyg... 402 e-112
Alignment gi|NP_001071595.1| 14-3-3 protein theta [Bos taurus]. 385 e-107
Alignment gi|NP_777218.2| 14-3-3 protein gamma [Bos taurus]. 348 6e-96
Alignment gi|NP_776917.2| 14-3-3 protein eta [Bos taurus]. 345 4e-95
Alignment gi|XP_002699268.1| PREDICTED: tyrosine 3/tryptophan 5 -monooxyg... 342 5e-94
Alignment gi|XP_582688.2| PREDICTED: tyrosine 3/tryptophan 5 -monooxygena... 342 5e-94
Alignment gi|NP_001069380.1| 14-3-3 protein sigma [Bos taurus]. 316 2e-86
>ref|NP_777219.2| 14-3-3 protein beta/alpha [Bos taurus].
Length = 246
Score = 455 bits (1170), Expect = e-128
Identities = 232/232 (100%), Positives = 232/232 (100%)
Frame = +1
Query: 205 MTMDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSS 384
MTMDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSS
Sbjct: 1 MTMDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSS 60
Query: 385 WRVISSIEQKTERNEKKQQMGKEYREKIEAELQDICNDVLELLDKYLIPNATQPESKVFY 564
WRVISSIEQKTERNEKKQQMGKEYREKIEAELQDICNDVLELLDKYLIPNATQPESKVFY
Sbjct: 61 WRVISSIEQKTERNEKKQQMGKEYREKIEAELQDICNDVLELLDKYLIPNATQPESKVFY 120
Query: 565 LKMKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFY 744
LKMKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFY
Sbjct: 121 LKMKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFY 180
Query: 745 YEILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTS 900
YEILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTS
Sbjct: 181 YEILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTS 232
>ref|NP_777239.1| 14-3-3 protein zeta/delta [Bos taurus].
Length = 245
Score = 403 bits (1036), Expect = e-112
Identities = 204/230 (88%), Positives = 218/230 (94%)
Frame = +1
Query: 211 MDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSSWR 390
MDK+ELVQKAKLAEQAERYDDMAA MK+VTEQG ELSNEERNLLSVAYKNVVGARRSSWR
Sbjct: 1 MDKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSWR 60
Query: 391 VISSIEQKTERNEKKQQMGKEYREKIEAELQDICNDVLELLDKYLIPNATQPESKVFYLK 570
V+SSIEQKTE EKKQQM +EYREKIE EL+DICNDVL LL+K+LIPNA+Q ESKVFYLK
Sbjct: 61 VVSSIEQKTEGAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQAESKVFYLK 120
Query: 571 MKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE 750
MKGDY+RYL+EVA+GD+K+ V SQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE
Sbjct: 121 MKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE 180
Query: 751 ILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTS 900
ILNSPEKACSLAKTAFDEAIAELDTL+EESYKDSTLIMQLLRDNLTLWTS
Sbjct: 181 ILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTS 230
>ref|XP_002696287.1| PREDICTED: tyrosine 3/tryptophan 5 -monooxygenase activation
protein, zeta polypeptide-like [Bos taurus].
Length = 245
Score = 402 bits (1033), Expect = e-112
Identities = 203/230 (88%), Positives = 218/230 (94%)
Frame = +1
Query: 211 MDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSSWR 390
MDK+ELVQKAKLAEQAERYDDMAA MK+VTEQG ELSNE+RNLLSVAYKNVVGARRSSWR
Sbjct: 1 MDKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEDRNLLSVAYKNVVGARRSSWR 60
Query: 391 VISSIEQKTERNEKKQQMGKEYREKIEAELQDICNDVLELLDKYLIPNATQPESKVFYLK 570
V+SSIEQKTE EKKQQM +EYREKIE EL+DICNDVL LL+K+LIPNA+Q ESKVFYLK
Sbjct: 61 VVSSIEQKTEGAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQAESKVFYLK 120
Query: 571 MKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE 750
MKGDY+RYL+EVA+GD+K+ V SQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE
Sbjct: 121 MKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE 180
Query: 751 ILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTS 900
ILNSPEKACSLAKTAFDEAIAELDTL+EESYKDSTLIMQLLRDNLTLWTS
Sbjct: 181 ILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTS 230
>ref|XP_002702517.1| PREDICTED: tyrosine 3/tryptophan 5 -monooxygenase activation
protein, zeta polypeptide [Bos taurus].
Length = 245
Score = 402 bits (1033), Expect = e-112
Identities = 203/230 (88%), Positives = 218/230 (94%)
Frame = +1
Query: 211 MDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSSWR 390
MDK+ELVQKAKLAEQAERYDDMAA MK+VTEQG ELSNE+RNLLSVAYKNVVGARRSSWR
Sbjct: 1 MDKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEDRNLLSVAYKNVVGARRSSWR 60
Query: 391 VISSIEQKTERNEKKQQMGKEYREKIEAELQDICNDVLELLDKYLIPNATQPESKVFYLK 570
V+SSIEQKTE EKKQQM +EYREKIE EL+DICNDVL LL+K+LIPNA+Q ESKVFYLK
Sbjct: 61 VVSSIEQKTEGAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQAESKVFYLK 120
Query: 571 MKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE 750
MKGDY+RYL+EVA+GD+K+ V SQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE
Sbjct: 121 MKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE 180
Query: 751 ILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTS 900
ILNSPEKACSLAKTAFDEAIAELDTL+EESYKDSTLIMQLLRDNLTLWTS
Sbjct: 181 ILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTS 230
>ref|NP_001071595.1| 14-3-3 protein theta [Bos taurus].
Length = 245
Score = 385 bits (990), Expect = e-107
Identities = 192/230 (83%), Positives = 213/230 (92%)
Frame = +1
Query: 211 MDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSSWR 390
M+K+EL+QKAKLAEQAERYDDMA MKAVTEQG ELSNEERNLLSVAYKNVVG RRS+WR
Sbjct: 1 MEKTELIQKAKLAEQAERYDDMATCMKAVTEQGAELSNEERNLLSVAYKNVVGGRRSAWR 60
Query: 391 VISSIEQKTERNEKKQQMGKEYREKIEAELQDICNDVLELLDKYLIPNATQPESKVFYLK 570
VISSIEQKT+ ++KK Q+ K+YREK+E+EL+ IC VLELLDKYLI NAT PESKVFYLK
Sbjct: 61 VISSIEQKTDTSDKKLQLIKDYREKVESELRSICTTVLELLDKYLIANATNPESKVFYLK 120
Query: 571 MKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE 750
MKGDYFRYL+EVA GD+++ T+ NSQ AYQEAF+ISKKEMQPTHPIRLGLALNFSVFYYE
Sbjct: 121 MKGDYFRYLAEVACGDDRKQTIDNSQGAYQEAFDISKKEMQPTHPIRLGLALNFSVFYYE 180
Query: 751 ILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTS 900
ILN+PE AC+LAKTAFDEAIAELDTLNE+SYKDSTLIMQLLRDNLTLWTS
Sbjct: 181 ILNNPELACTLAKTAFDEAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTS 230
>ref|NP_777218.2| 14-3-3 protein gamma [Bos taurus].
Length = 247
Score = 348 bits (893), Expect = 6e-96
Identities = 180/234 (76%), Positives = 203/234 (86%), Gaps = 4/234 (1%)
Frame = +1
Query: 211 MDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSSWR 390
+D+ +LVQKA+LAEQAERYDDMAAAMK VTE LSNEERNLLSVAYKNVVGARRSSWR
Sbjct: 2 VDREQLVQKARLAEQAERYDDMAAAMKNVTELNEPLSNEERNLLSVAYKNVVGARRSSWR 61
Query: 391 VISSIEQKT--ERNEKKQQMGKEYREKIEAELQDICNDVLELLDKYLIPNA--TQPESKV 558
VISSIEQKT + NEKK +M + YREKIE EL+ +C DVL LLD YLI N TQ ESKV
Sbjct: 62 VISSIEQKTSADGNEKKIEMVRAYREKIEKELEAVCQDVLSLLDNYLIKNCSETQYESKV 121
Query: 559 FYLKMKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSV 738
FYLKMKGDY+RYL+EVA+G+ + T V +S++AY EA EISK+ MQPTHPIRLGLALN+SV
Sbjct: 122 FYLKMKGDYYRYLAEVATGEKRATVVESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSV 181
Query: 739 FYYEILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTS 900
FYYEI N+PE+AC LAKTAFD+AIAELDTLNE+SYKDSTLIMQLLRDNLTLWTS
Sbjct: 182 FYYEIQNAPEQACHLAKTAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTS 235
>ref|NP_776917.2| 14-3-3 protein eta [Bos taurus].
Length = 246
Score = 345 bits (886), Expect = 4e-95
Identities = 179/233 (76%), Positives = 201/233 (86%), Gaps = 4/233 (1%)
Frame = +1
Query: 214 DKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSSWRV 393
D+ +L+Q+A+LAEQAERYDDMA+AMKAVTE LSNE+RNLLSVAYKNVVGARRSSWRV
Sbjct: 3 DREQLLQRARLAEQAERYDDMASAMKAVTELNEPLSNEDRNLLSVAYKNVVGARRSSWRV 62
Query: 394 ISSIEQKT--ERNEKKQQMGKEYREKIEAELQDICNDVLELLDKYLIPNAT--QPESKVF 561
ISSIEQKT + NEKK + K YREKIE EL+ +CNDVL LLDK+LI N Q ESKVF
Sbjct: 63 ISSIEQKTMADGNEKKLEKVKAYREKIEKELETVCNDVLALLDKFLIKNCNDFQYESKVF 122
Query: 562 YLKMKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVF 741
YLKMKGDY+RYL+EVASG K + V S+ AY+EAFEISK+ MQPTHPIRLGLALNFSVF
Sbjct: 123 YLKMKGDYYRYLAEVASGQKKNSVVEASEAAYKEAFEISKEHMQPTHPIRLGLALNFSVF 182
Query: 742 YYEILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTS 900
YYEI N+PE+AC LAK AFD+AIAELDTLNE+SYKDSTLIMQLLRDNLTLWTS
Sbjct: 183 YYEIQNAPEQACLLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTS 235
>ref|XP_002699268.1| PREDICTED: tyrosine 3/tryptophan 5 -monooxygenase activation
protein, theta polypeptide-like [Bos taurus].
Length = 243
Score = 342 bits (876), Expect = 5e-94
Identities = 176/230 (76%), Positives = 199/230 (86%)
Frame = +1
Query: 211 MDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSSWR 390
M+K+EL+QK KLAEQAE YDDMA MKA+TEQG E SNEERNLLSVAYK VVG RRS+WR
Sbjct: 1 MEKTELIQKVKLAEQAEHYDDMATCMKAMTEQGAEPSNEERNLLSVAYK-VVGGRRSAWR 59
Query: 391 VISSIEQKTERNEKKQQMGKEYREKIEAELQDICNDVLELLDKYLIPNATQPESKVFYLK 570
VISS EQKT+ ++KK Q+ K+Y EK+E++L+ IC VLELLDKYL NAT PES VFYLK
Sbjct: 60 VISSFEQKTDTSDKKLQLIKDYWEKVESKLRSICTTVLELLDKYLTANATNPES-VFYLK 118
Query: 571 MKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE 750
MKGDYFRYL+EVA D+++ T+ NSQ AYQEAF ISKKEMQPTHPI LGLALNFSV YYE
Sbjct: 119 MKGDYFRYLAEVACDDDQKQTIDNSQGAYQEAFHISKKEMQPTHPIGLGLALNFSVLYYE 178
Query: 751 ILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTS 900
ILN+PE AC+LAKTAFDEA+AELDTLNE+S KDSTLIMQLLRDNL LWTS
Sbjct: 179 ILNNPELACTLAKTAFDEALAELDTLNEDSCKDSTLIMQLLRDNLALWTS 228
>ref|XP_582688.2| PREDICTED: tyrosine 3/tryptophan 5 -monooxygenase activation
protein, theta polypeptide isoform 1 [Bos taurus].
Length = 243
Score = 342 bits (876), Expect = 5e-94
Identities = 176/230 (76%), Positives = 199/230 (86%)
Frame = +1
Query: 211 MDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSSWR 390
M+K+EL+QK KLAEQAE YDDMA MKA+TEQG E SNEERNLLSVAYK VVG RRS+WR
Sbjct: 1 MEKTELIQKVKLAEQAEHYDDMATCMKAMTEQGAEPSNEERNLLSVAYK-VVGGRRSAWR 59
Query: 391 VISSIEQKTERNEKKQQMGKEYREKIEAELQDICNDVLELLDKYLIPNATQPESKVFYLK 570
VISS EQKT+ ++KK Q+ K+Y EK+E++L+ IC VLELLDKYL NAT PES VFYLK
Sbjct: 60 VISSFEQKTDTSDKKLQLIKDYWEKVESKLRSICTTVLELLDKYLTANATNPES-VFYLK 118
Query: 571 MKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE 750
MKGDYFRYL+EVA D+++ T+ NSQ AYQEAF ISKKEMQPTHPI LGLALNFSV YYE
Sbjct: 119 MKGDYFRYLAEVACDDDQKQTIDNSQGAYQEAFHISKKEMQPTHPIGLGLALNFSVLYYE 178
Query: 751 ILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTS 900
ILN+PE AC+LAKTAFDEA+AELDTLNE+S KDSTLIMQLLRDNL LWTS
Sbjct: 179 ILNNPELACTLAKTAFDEALAELDTLNEDSCKDSTLIMQLLRDNLALWTS 228
>ref|NP_001069380.1| 14-3-3 protein sigma [Bos taurus].
Length = 248
Score = 316 bits (810), Expect = 2e-86
Identities = 159/232 (68%), Positives = 198/232 (85%), Gaps = 2/232 (0%)
Frame = +1
Query: 211 MDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSSWR 390
M+++ L+QKAKLAEQAERY+DMAA MK+ E+G ELS EERNLLSVAYKNVVG +R++WR
Sbjct: 1 MERASLIQKAKLAEQAERYEDMAAFMKSAVEKGEELSCEERNLLSVAYKNVVGGQRAAWR 60
Query: 391 VISSIEQKT--ERNEKKQQMGKEYREKIEAELQDICNDVLELLDKYLIPNATQPESKVFY 564
V+SSIEQK+ E +E+K +EYREK+E EL+ +C+ VL LLD +LI A ES+VFY
Sbjct: 61 VLSSIEQKSNEESSEEKGPEVQEYREKVETELRGVCDTVLGLLDTHLIKEAGDAESRVFY 120
Query: 565 LKMKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFY 744
LKMKGDY+RYL+EVA+GD+K+ + +++ AYQEA +ISKKEM PT+PIRLGLALNFSVF+
Sbjct: 121 LKMKGDYYRYLAEVATGDDKKRIIDSARSAYQEAMDISKKEMPPTNPIRLGLALNFSVFH 180
Query: 745 YEILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTS 900
YEI NSPE+A SLAKT FDEA+A+L TL+E+SYKDSTLIMQLLRDNLTLWT+
Sbjct: 181 YEIANSPEEAISLAKTTFDEAMADLHTLSEDSYKDSTLIMQLLRDNLTLWTA 232
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 41,509,075
Number of extensions: 1095635
Number of successful extensions: 3354
Number of sequences better than 1.0e-05: 13
Number of HSP's gapped: 3334
Number of HSP's successfully gapped: 13
Length of query: 410
Length of database: 17,681,374
Length adjustment: 105
Effective length of query: 305
Effective length of database: 14,207,134
Effective search space: 4333175870
Effective search space used: 4333175870
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007016
(1230 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_534429.2| PREDICTED: similar to 14-3-3 protein beta/alpha... 451 e-127
Alignment gi|XP_852754.1| PREDICTED: similar to 14-3-3 protein beta/alpha... 451 e-127
Alignment gi|XP_533072.2| PREDICTED: similar to tyrosine 3/tryptophan 5 -... 403 e-112
Alignment gi|XP_857778.1| PREDICTED: similar to tyrosine 3/tryptophan 5 -... 403 e-112
Alignment gi|XP_849044.1| PREDICTED: similar to tyrosine 3/tryptophan 5 -... 403 e-112
Alignment gi|XP_857856.1| PREDICTED: similar to tyrosine 3/tryptophan 5 -... 397 e-111
Alignment gi|XP_857819.1| PREDICTED: similar to tyrosine 3/tryptophan 5 -... 396 e-110
Alignment gi|XP_850323.1| PREDICTED: similar to tyrosine 3/tryptophan 5 -... 392 e-109
Alignment gi|XP_532871.1| PREDICTED: similar to 14-3-3 protein theta (14-... 385 e-107
Alignment gi|XP_866301.1| PREDICTED: similar to 14-3-3 protein beta/alpha... 380 e-105
>ref|XP_534429.2| PREDICTED: similar to 14-3-3 protein beta/alpha (Protein kinase C
inhibitor protein-1) (KCIP-1) (Protein 1054) isoform 1
[Canis familiaris].
Length = 244
Score = 451 bits (1160), Expect = e-127
Identities = 230/230 (100%), Positives = 230/230 (100%)
Frame = +1
Query: 211 MDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSSWR 390
MDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSSWR
Sbjct: 1 MDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSSWR 60
Query: 391 VISSIEQKTERNEKKQQMGKEYREKIEAELQDICNDVLELLDKYLIPNATQPESKVFYLK 570
VISSIEQKTERNEKKQQMGKEYREKIEAELQDICNDVLELLDKYLIPNATQPESKVFYLK
Sbjct: 61 VISSIEQKTERNEKKQQMGKEYREKIEAELQDICNDVLELLDKYLIPNATQPESKVFYLK 120
Query: 571 MKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE 750
MKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE
Sbjct: 121 MKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE 180
Query: 751 ILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTS 900
ILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTS
Sbjct: 181 ILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTS 230
>ref|XP_852754.1| PREDICTED: similar to 14-3-3 protein beta/alpha (Protein kinase C
inhibitor protein-1) (KCIP-1) (Protein 1054) isoform 2
[Canis familiaris].
Length = 244
Score = 451 bits (1160), Expect = e-127
Identities = 230/230 (100%), Positives = 230/230 (100%)
Frame = +1
Query: 211 MDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSSWR 390
MDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSSWR
Sbjct: 1 MDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSSWR 60
Query: 391 VISSIEQKTERNEKKQQMGKEYREKIEAELQDICNDVLELLDKYLIPNATQPESKVFYLK 570
VISSIEQKTERNEKKQQMGKEYREKIEAELQDICNDVLELLDKYLIPNATQPESKVFYLK
Sbjct: 61 VISSIEQKTERNEKKQQMGKEYREKIEAELQDICNDVLELLDKYLIPNATQPESKVFYLK 120
Query: 571 MKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE 750
MKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE
Sbjct: 121 MKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE 180
Query: 751 ILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTS 900
ILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTS
Sbjct: 181 ILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTS 230
>ref|XP_533072.2| PREDICTED: similar to tyrosine 3/tryptophan 5 -monooxygenase
activation protein, zeta polypeptide isoform 1 [Canis
familiaris].
Length = 245
Score = 403 bits (1036), Expect = e-112
Identities = 204/230 (88%), Positives = 218/230 (94%)
Frame = +1
Query: 211 MDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSSWR 390
MDK+ELVQKAKLAEQAERYDDMAA MK+VTEQG ELSNEERNLLSVAYKNVVGARRSSWR
Sbjct: 1 MDKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSWR 60
Query: 391 VISSIEQKTERNEKKQQMGKEYREKIEAELQDICNDVLELLDKYLIPNATQPESKVFYLK 570
V+SSIEQKTE EKKQQM +EYREKIE EL+DICNDVL LL+K+LIPNA+Q ESKVFYLK
Sbjct: 61 VVSSIEQKTEGAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQAESKVFYLK 120
Query: 571 MKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE 750
MKGDY+RYL+EVA+GD+K+ V SQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE
Sbjct: 121 MKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE 180
Query: 751 ILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTS 900
ILNSPEKACSLAKTAFDEAIAELDTL+EESYKDSTLIMQLLRDNLTLWTS
Sbjct: 181 ILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTS 230
>ref|XP_857778.1| PREDICTED: similar to tyrosine 3/tryptophan 5 -monooxygenase
activation protein, zeta polypeptide isoform 3 [Canis
familiaris].
Length = 245
Score = 403 bits (1036), Expect = e-112
Identities = 204/230 (88%), Positives = 218/230 (94%)
Frame = +1
Query: 211 MDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSSWR 390
MDK+ELVQKAKLAEQAERYDDMAA MK+VTEQG ELSNEERNLLSVAYKNVVGARRSSWR
Sbjct: 1 MDKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSWR 60
Query: 391 VISSIEQKTERNEKKQQMGKEYREKIEAELQDICNDVLELLDKYLIPNATQPESKVFYLK 570
V+SSIEQKTE EKKQQM +EYREKIE EL+DICNDVL LL+K+LIPNA+Q ESKVFYLK
Sbjct: 61 VVSSIEQKTEGAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQAESKVFYLK 120
Query: 571 MKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE 750
MKGDY+RYL+EVA+GD+K+ V SQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE
Sbjct: 121 MKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE 180
Query: 751 ILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTS 900
ILNSPEKACSLAKTAFDEAIAELDTL+EESYKDSTLIMQLLRDNLTLWTS
Sbjct: 181 ILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTS 230
>ref|XP_849044.1| PREDICTED: similar to tyrosine 3/tryptophan 5 -monooxygenase
activation protein, zeta polypeptide isoform 2 [Canis
familiaris].
Length = 245
Score = 403 bits (1036), Expect = e-112
Identities = 204/230 (88%), Positives = 218/230 (94%)
Frame = +1
Query: 211 MDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSSWR 390
MDK+ELVQKAKLAEQAERYDDMAA MK+VTEQG ELSNEERNLLSVAYKNVVGARRSSWR
Sbjct: 1 MDKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSWR 60
Query: 391 VISSIEQKTERNEKKQQMGKEYREKIEAELQDICNDVLELLDKYLIPNATQPESKVFYLK 570
V+SSIEQKTE EKKQQM +EYREKIE EL+DICNDVL LL+K+LIPNA+Q ESKVFYLK
Sbjct: 61 VVSSIEQKTEGAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQAESKVFYLK 120
Query: 571 MKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE 750
MKGDY+RYL+EVA+GD+K+ V SQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE
Sbjct: 121 MKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE 180
Query: 751 ILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTS 900
ILNSPEKACSLAKTAFDEAIAELDTL+EESYKDSTLIMQLLRDNLTLWTS
Sbjct: 181 ILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTS 230
>ref|XP_857856.1| PREDICTED: similar to tyrosine 3/tryptophan 5 -monooxygenase
activation protein, zeta polypeptide isoform 5 [Canis
familiaris].
Length = 229
Score = 397 bits (1021), Expect = e-111
Identities = 201/228 (88%), Positives = 215/228 (94%)
Frame = +1
Query: 211 MDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSSWR 390
MDK+ELVQKAKLAEQAERYDDMAA MK+VTEQG ELSNEERNLLSVAYKNVVGARRSSWR
Sbjct: 1 MDKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSWR 60
Query: 391 VISSIEQKTERNEKKQQMGKEYREKIEAELQDICNDVLELLDKYLIPNATQPESKVFYLK 570
V+SSIEQKTE EKKQQM +EYREKIE EL+DICNDVL LL+K+LIPNA+Q ESKVFYLK
Sbjct: 61 VVSSIEQKTEGAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQAESKVFYLK 120
Query: 571 MKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE 750
MKGDY+RYL+EVA+GD+K+ V SQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE
Sbjct: 121 MKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE 180
Query: 751 ILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLW 894
ILNSPEKACSLAKTAFDEAIAELDTL+EESYKDSTLIMQLLRDNLT W
Sbjct: 181 ILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTWW 228
>ref|XP_857819.1| PREDICTED: similar to tyrosine 3/tryptophan 5 -monooxygenase
activation protein, zeta polypeptide isoform 4 [Canis
familiaris].
Length = 254
Score = 396 bits (1018), Expect = e-110
Identities = 204/239 (85%), Positives = 218/239 (91%), Gaps = 9/239 (3%)
Frame = +1
Query: 211 MDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSSWR 390
MDK+ELVQKAKLAEQAERYDDMAA MK+VTEQG ELSNEERNLLSVAYKNVVGARRSSWR
Sbjct: 1 MDKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSWR 60
Query: 391 VISSIEQKTERNEKKQQMGKEYREKIEAELQDICNDVLELLDKYLIPNATQPESKVFYLK 570
V+SSIEQKTE EKKQQM +EYREKIE EL+DICNDVL LL+K+LIPNA+Q ESKVFYLK
Sbjct: 61 VVSSIEQKTEGAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQAESKVFYLK 120
Query: 571 MKGDYFRYLSEVASGDNKQT---------TVSNSQQAYQEAFEISKKEMQPTHPIRLGLA 723
MKGDY+RYL+EVA+GD+K+ V SQQAYQEAFEISKKEMQPTHPIRLGLA
Sbjct: 121 MKGDYYRYLAEVAAGDDKKVCFGMFYFPGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLA 180
Query: 724 LNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTS 900
LNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTL+EESYKDSTLIMQLLRDNLTLWTS
Sbjct: 181 LNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTS 239
>ref|XP_850323.1| PREDICTED: similar to tyrosine 3/tryptophan 5 -monooxygenase
activation protein, zeta polypeptide [Canis familiaris].
Length = 289
Score = 392 bits (1008), Expect = e-109
Identities = 201/231 (87%), Positives = 215/231 (93%)
Frame = +1
Query: 208 TMDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSSW 387
T K+ELVQKAKLAEQAERYDDMAA MK+VTEQG ELSNEERNLLSVAYKNVVGARRSSW
Sbjct: 44 TGHKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSW 103
Query: 388 RVISSIEQKTERNEKKQQMGKEYREKIEAELQDICNDVLELLDKYLIPNATQPESKVFYL 567
RV+SSIEQKTE EKKQQM +EYREKIE EL+DICNDVL LL+K+LIPNA+Q ESKVF L
Sbjct: 104 RVVSSIEQKTEGAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQAESKVFCL 163
Query: 568 KMKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYY 747
KMKGDY+RYL+EVA+GD+K+ V SQQA QEAFEISKKEMQPTHPIRLGLALNFSVFYY
Sbjct: 164 KMKGDYYRYLAEVAAGDDKKGIVDQSQQANQEAFEISKKEMQPTHPIRLGLALNFSVFYY 223
Query: 748 EILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTS 900
EILNSPEKACSLAKTAFDEAIAELDTL+EESYKDSTLIMQLLRDNLTLWTS
Sbjct: 224 EILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTS 274
>ref|XP_532871.1| PREDICTED: similar to 14-3-3 protein theta (14-3-3 protein tau)
(14-3-3 protein T-cell) (HS1 protein) isoform 1 [Canis
familiaris].
Length = 245
Score = 385 bits (990), Expect = e-107
Identities = 192/230 (83%), Positives = 213/230 (92%)
Frame = +1
Query: 211 MDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSSWR 390
M+K+EL+QKAKLAEQAERYDDMA MKAVTEQG ELSNEERNLLSVAYKNVVG RRS+WR
Sbjct: 1 MEKTELIQKAKLAEQAERYDDMATCMKAVTEQGAELSNEERNLLSVAYKNVVGGRRSAWR 60
Query: 391 VISSIEQKTERNEKKQQMGKEYREKIEAELQDICNDVLELLDKYLIPNATQPESKVFYLK 570
VISSIEQKT+ ++KK Q+ K+YREK+E+EL+ IC VLELLDKYLI NAT PESKVFYLK
Sbjct: 61 VISSIEQKTDTSDKKLQLIKDYREKVESELRSICTTVLELLDKYLIANATNPESKVFYLK 120
Query: 571 MKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE 750
MKGDYFRYL+EVA GD+++ T+ NSQ AYQEAF+ISKKEMQPTHPIRLGLALNFSVFYYE
Sbjct: 121 MKGDYFRYLAEVACGDDRKQTIDNSQGAYQEAFDISKKEMQPTHPIRLGLALNFSVFYYE 180
Query: 751 ILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTS 900
ILN+PE AC+LAKTAFDEAIAELDTLNE+SYKDSTLIMQLLRDNLTLWTS
Sbjct: 181 ILNNPELACTLAKTAFDEAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTS 230
>ref|XP_866301.1| PREDICTED: similar to 14-3-3 protein beta/alpha (Protein kinase C
inhibitor protein-1) (KCIP-1) (Prepronerve growth factor
RNH-1) isoform 4 [Canis familiaris].
Length = 216
Score = 380 bits (977), Expect = e-105
Identities = 202/230 (87%), Positives = 202/230 (87%)
Frame = +1
Query: 211 MDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSSWR 390
MDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSSWR
Sbjct: 1 MDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSSWR 60
Query: 391 VISSIEQKTERNEKKQQMGKEYREKIEAELQDICNDVLELLDKYLIPNATQPESKVFYLK 570
VISSIEQKTERNEKKQQMGKEYREKIE VFYLK
Sbjct: 61 VISSIEQKTERNEKKQQMGKEYREKIE----------------------------VFYLK 92
Query: 571 MKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE 750
MKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE
Sbjct: 93 MKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE 152
Query: 751 ILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTS 900
ILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTS
Sbjct: 153 ILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTS 202
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 42,929,065
Number of extensions: 1050988
Number of successful extensions: 3921
Number of sequences better than 1.0e-05: 25
Number of HSP's gapped: 3897
Number of HSP's successfully gapped: 25
Length of query: 410
Length of database: 18,874,504
Length adjustment: 105
Effective length of query: 305
Effective length of database: 15,374,224
Effective search space: 4689138320
Effective search space used: 4689138320
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007016
(1230 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_003395.1| 14-3-3 protein beta/alpha [Homo sapiens]. 455 e-128
Alignment gi|NP_647539.1| 14-3-3 protein beta/alpha [Homo sapiens]. 455 e-128
Alignment gi|NP_001129174.1| 14-3-3 protein zeta/delta [Homo sapiens]. 403 e-112
Alignment gi|NP_001129173.1| 14-3-3 protein zeta/delta [Homo sapiens]. 403 e-112
Alignment gi|NP_001129172.1| 14-3-3 protein zeta/delta [Homo sapiens]. 403 e-112
Alignment gi|NP_001129171.1| 14-3-3 protein zeta/delta [Homo sapiens]. 403 e-112
Alignment gi|NP_663723.1| 14-3-3 protein zeta/delta [Homo sapiens]. 403 e-112
Alignment gi|NP_003397.1| 14-3-3 protein zeta/delta [Homo sapiens]. 403 e-112
Alignment gi|NP_006817.1| 14-3-3 protein theta [Homo sapiens]. 385 e-107
Alignment gi|NP_036611.2| 14-3-3 protein gamma [Homo sapiens]. 348 6e-96
>ref|NP_003395.1| 14-3-3 protein beta/alpha [Homo sapiens].
Length = 246
Score = 455 bits (1170), Expect = e-128
Identities = 232/232 (100%), Positives = 232/232 (100%)
Frame = +1
Query: 205 MTMDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSS 384
MTMDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSS
Sbjct: 1 MTMDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSS 60
Query: 385 WRVISSIEQKTERNEKKQQMGKEYREKIEAELQDICNDVLELLDKYLIPNATQPESKVFY 564
WRVISSIEQKTERNEKKQQMGKEYREKIEAELQDICNDVLELLDKYLIPNATQPESKVFY
Sbjct: 61 WRVISSIEQKTERNEKKQQMGKEYREKIEAELQDICNDVLELLDKYLIPNATQPESKVFY 120
Query: 565 LKMKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFY 744
LKMKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFY
Sbjct: 121 LKMKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFY 180
Query: 745 YEILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTS 900
YEILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTS
Sbjct: 181 YEILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTS 232
>ref|NP_647539.1| 14-3-3 protein beta/alpha [Homo sapiens].
Length = 246
Score = 455 bits (1170), Expect = e-128
Identities = 232/232 (100%), Positives = 232/232 (100%)
Frame = +1
Query: 205 MTMDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSS 384
MTMDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSS
Sbjct: 1 MTMDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSS 60
Query: 385 WRVISSIEQKTERNEKKQQMGKEYREKIEAELQDICNDVLELLDKYLIPNATQPESKVFY 564
WRVISSIEQKTERNEKKQQMGKEYREKIEAELQDICNDVLELLDKYLIPNATQPESKVFY
Sbjct: 61 WRVISSIEQKTERNEKKQQMGKEYREKIEAELQDICNDVLELLDKYLIPNATQPESKVFY 120
Query: 565 LKMKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFY 744
LKMKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFY
Sbjct: 121 LKMKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFY 180
Query: 745 YEILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTS 900
YEILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTS
Sbjct: 181 YEILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTS 232
>ref|NP_001129174.1| 14-3-3 protein zeta/delta [Homo sapiens].
Length = 245
Score = 403 bits (1036), Expect = e-112
Identities = 204/230 (88%), Positives = 218/230 (94%)
Frame = +1
Query: 211 MDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSSWR 390
MDK+ELVQKAKLAEQAERYDDMAA MK+VTEQG ELSNEERNLLSVAYKNVVGARRSSWR
Sbjct: 1 MDKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSWR 60
Query: 391 VISSIEQKTERNEKKQQMGKEYREKIEAELQDICNDVLELLDKYLIPNATQPESKVFYLK 570
V+SSIEQKTE EKKQQM +EYREKIE EL+DICNDVL LL+K+LIPNA+Q ESKVFYLK
Sbjct: 61 VVSSIEQKTEGAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQAESKVFYLK 120
Query: 571 MKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE 750
MKGDY+RYL+EVA+GD+K+ V SQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE
Sbjct: 121 MKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE 180
Query: 751 ILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTS 900
ILNSPEKACSLAKTAFDEAIAELDTL+EESYKDSTLIMQLLRDNLTLWTS
Sbjct: 181 ILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTS 230
>ref|NP_001129173.1| 14-3-3 protein zeta/delta [Homo sapiens].
Length = 245
Score = 403 bits (1036), Expect = e-112
Identities = 204/230 (88%), Positives = 218/230 (94%)
Frame = +1
Query: 211 MDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSSWR 390
MDK+ELVQKAKLAEQAERYDDMAA MK+VTEQG ELSNEERNLLSVAYKNVVGARRSSWR
Sbjct: 1 MDKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSWR 60
Query: 391 VISSIEQKTERNEKKQQMGKEYREKIEAELQDICNDVLELLDKYLIPNATQPESKVFYLK 570
V+SSIEQKTE EKKQQM +EYREKIE EL+DICNDVL LL+K+LIPNA+Q ESKVFYLK
Sbjct: 61 VVSSIEQKTEGAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQAESKVFYLK 120
Query: 571 MKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE 750
MKGDY+RYL+EVA+GD+K+ V SQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE
Sbjct: 121 MKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE 180
Query: 751 ILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTS 900
ILNSPEKACSLAKTAFDEAIAELDTL+EESYKDSTLIMQLLRDNLTLWTS
Sbjct: 181 ILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTS 230
>ref|NP_001129172.1| 14-3-3 protein zeta/delta [Homo sapiens].
Length = 245
Score = 403 bits (1036), Expect = e-112
Identities = 204/230 (88%), Positives = 218/230 (94%)
Frame = +1
Query: 211 MDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSSWR 390
MDK+ELVQKAKLAEQAERYDDMAA MK+VTEQG ELSNEERNLLSVAYKNVVGARRSSWR
Sbjct: 1 MDKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSWR 60
Query: 391 VISSIEQKTERNEKKQQMGKEYREKIEAELQDICNDVLELLDKYLIPNATQPESKVFYLK 570
V+SSIEQKTE EKKQQM +EYREKIE EL+DICNDVL LL+K+LIPNA+Q ESKVFYLK
Sbjct: 61 VVSSIEQKTEGAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQAESKVFYLK 120
Query: 571 MKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE 750
MKGDY+RYL+EVA+GD+K+ V SQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE
Sbjct: 121 MKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE 180
Query: 751 ILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTS 900
ILNSPEKACSLAKTAFDEAIAELDTL+EESYKDSTLIMQLLRDNLTLWTS
Sbjct: 181 ILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTS 230
>ref|NP_001129171.1| 14-3-3 protein zeta/delta [Homo sapiens].
Length = 245
Score = 403 bits (1036), Expect = e-112
Identities = 204/230 (88%), Positives = 218/230 (94%)
Frame = +1
Query: 211 MDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSSWR 390
MDK+ELVQKAKLAEQAERYDDMAA MK+VTEQG ELSNEERNLLSVAYKNVVGARRSSWR
Sbjct: 1 MDKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSWR 60
Query: 391 VISSIEQKTERNEKKQQMGKEYREKIEAELQDICNDVLELLDKYLIPNATQPESKVFYLK 570
V+SSIEQKTE EKKQQM +EYREKIE EL+DICNDVL LL+K+LIPNA+Q ESKVFYLK
Sbjct: 61 VVSSIEQKTEGAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQAESKVFYLK 120
Query: 571 MKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE 750
MKGDY+RYL+EVA+GD+K+ V SQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE
Sbjct: 121 MKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE 180
Query: 751 ILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTS 900
ILNSPEKACSLAKTAFDEAIAELDTL+EESYKDSTLIMQLLRDNLTLWTS
Sbjct: 181 ILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTS 230
>ref|NP_663723.1| 14-3-3 protein zeta/delta [Homo sapiens].
Length = 245
Score = 403 bits (1036), Expect = e-112
Identities = 204/230 (88%), Positives = 218/230 (94%)
Frame = +1
Query: 211 MDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSSWR 390
MDK+ELVQKAKLAEQAERYDDMAA MK+VTEQG ELSNEERNLLSVAYKNVVGARRSSWR
Sbjct: 1 MDKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSWR 60
Query: 391 VISSIEQKTERNEKKQQMGKEYREKIEAELQDICNDVLELLDKYLIPNATQPESKVFYLK 570
V+SSIEQKTE EKKQQM +EYREKIE EL+DICNDVL LL+K+LIPNA+Q ESKVFYLK
Sbjct: 61 VVSSIEQKTEGAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQAESKVFYLK 120
Query: 571 MKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE 750
MKGDY+RYL+EVA+GD+K+ V SQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE
Sbjct: 121 MKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE 180
Query: 751 ILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTS 900
ILNSPEKACSLAKTAFDEAIAELDTL+EESYKDSTLIMQLLRDNLTLWTS
Sbjct: 181 ILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTS 230
>ref|NP_003397.1| 14-3-3 protein zeta/delta [Homo sapiens].
Length = 245
Score = 403 bits (1036), Expect = e-112
Identities = 204/230 (88%), Positives = 218/230 (94%)
Frame = +1
Query: 211 MDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSSWR 390
MDK+ELVQKAKLAEQAERYDDMAA MK+VTEQG ELSNEERNLLSVAYKNVVGARRSSWR
Sbjct: 1 MDKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSWR 60
Query: 391 VISSIEQKTERNEKKQQMGKEYREKIEAELQDICNDVLELLDKYLIPNATQPESKVFYLK 570
V+SSIEQKTE EKKQQM +EYREKIE EL+DICNDVL LL+K+LIPNA+Q ESKVFYLK
Sbjct: 61 VVSSIEQKTEGAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQAESKVFYLK 120
Query: 571 MKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE 750
MKGDY+RYL+EVA+GD+K+ V SQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE
Sbjct: 121 MKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE 180
Query: 751 ILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTS 900
ILNSPEKACSLAKTAFDEAIAELDTL+EESYKDSTLIMQLLRDNLTLWTS
Sbjct: 181 ILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTS 230
>ref|NP_006817.1| 14-3-3 protein theta [Homo sapiens].
Length = 245
Score = 385 bits (990), Expect = e-107
Identities = 192/230 (83%), Positives = 213/230 (92%)
Frame = +1
Query: 211 MDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSSWR 390
M+K+EL+QKAKLAEQAERYDDMA MKAVTEQG ELSNEERNLLSVAYKNVVG RRS+WR
Sbjct: 1 MEKTELIQKAKLAEQAERYDDMATCMKAVTEQGAELSNEERNLLSVAYKNVVGGRRSAWR 60
Query: 391 VISSIEQKTERNEKKQQMGKEYREKIEAELQDICNDVLELLDKYLIPNATQPESKVFYLK 570
VISSIEQKT+ ++KK Q+ K+YREK+E+EL+ IC VLELLDKYLI NAT PESKVFYLK
Sbjct: 61 VISSIEQKTDTSDKKLQLIKDYREKVESELRSICTTVLELLDKYLIANATNPESKVFYLK 120
Query: 571 MKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE 750
MKGDYFRYL+EVA GD+++ T+ NSQ AYQEAF+ISKKEMQPTHPIRLGLALNFSVFYYE
Sbjct: 121 MKGDYFRYLAEVACGDDRKQTIDNSQGAYQEAFDISKKEMQPTHPIRLGLALNFSVFYYE 180
Query: 751 ILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTS 900
ILN+PE AC+LAKTAFDEAIAELDTLNE+SYKDSTLIMQLLRDNLTLWTS
Sbjct: 181 ILNNPELACTLAKTAFDEAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTS 230
>ref|NP_036611.2| 14-3-3 protein gamma [Homo sapiens].
Length = 247
Score = 348 bits (893), Expect = 6e-96
Identities = 180/234 (76%), Positives = 203/234 (86%), Gaps = 4/234 (1%)
Frame = +1
Query: 211 MDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSSWR 390
+D+ +LVQKA+LAEQAERYDDMAAAMK VTE LSNEERNLLSVAYKNVVGARRSSWR
Sbjct: 2 VDREQLVQKARLAEQAERYDDMAAAMKNVTELNEPLSNEERNLLSVAYKNVVGARRSSWR 61
Query: 391 VISSIEQKT--ERNEKKQQMGKEYREKIEAELQDICNDVLELLDKYLIPNA--TQPESKV 558
VISSIEQKT + NEKK +M + YREKIE EL+ +C DVL LLD YLI N TQ ESKV
Sbjct: 62 VISSIEQKTSADGNEKKIEMVRAYREKIEKELEAVCQDVLSLLDNYLIKNCSETQYESKV 121
Query: 559 FYLKMKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSV 738
FYLKMKGDY+RYL+EVA+G+ + T V +S++AY EA EISK+ MQPTHPIRLGLALN+SV
Sbjct: 122 FYLKMKGDYYRYLAEVATGEKRATVVESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSV 181
Query: 739 FYYEILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTS 900
FYYEI N+PE+AC LAKTAFD+AIAELDTLNE+SYKDSTLIMQLLRDNLTLWTS
Sbjct: 182 FYYEIQNAPEQACHLAKTAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTS 235
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 42,116,871
Number of extensions: 1032270
Number of successful extensions: 3473
Number of sequences better than 1.0e-05: 13
Number of HSP's gapped: 3459
Number of HSP's successfully gapped: 13
Length of query: 410
Length of database: 18,297,164
Length adjustment: 105
Effective length of query: 305
Effective length of database: 14,835,944
Effective search space: 4524962920
Effective search space used: 4524962920
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007016
(1230 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_061223.2| 14-3-3 protein beta/alpha [Mus musculus]. 446 e-125
Alignment gi|NP_035870.1| 14-3-3 protein zeta/delta [Mus musculus]. 406 e-113
Alignment gi|XP_001473550.2| PREDICTED: 14-3-3 protein theta-like [Mus mu... 387 e-107
Alignment gi|XP_003085851.1| PREDICTED: 14-3-3 protein theta-like [Mus mu... 385 e-107
Alignment gi|XP_003085853.1| PREDICTED: 14-3-3 protein theta-like [Mus mu... 385 e-107
Alignment gi|XP_003085854.1| PREDICTED: 14-3-3 protein theta-like [Mus mu... 385 e-107
Alignment gi|XP_003085852.1| PREDICTED: 14-3-3 protein theta-like [Mus mu... 385 e-107
Alignment gi|XP_003085850.1| PREDICTED: 14-3-3 protein theta-like [Mus mu... 385 e-107
Alignment gi|NP_035869.1| 14-3-3 protein theta [Mus musculus]. 385 e-107
Alignment gi|XP_003086040.1| PREDICTED: 14-3-3 protein theta-like [Mus mu... 369 e-102
>ref|NP_061223.2| 14-3-3 protein beta/alpha [Mus musculus].
Length = 246
Score = 446 bits (1148), Expect = e-125
Identities = 229/232 (98%), Positives = 230/232 (99%)
Frame = +1
Query: 205 MTMDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSS 384
MTMDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSS
Sbjct: 1 MTMDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSS 60
Query: 385 WRVISSIEQKTERNEKKQQMGKEYREKIEAELQDICNDVLELLDKYLIPNATQPESKVFY 564
WRVISSIEQKTERNEKKQQMGKEYREKIEAELQDICNDVLELLDKYLI NATQ ESKVFY
Sbjct: 61 WRVISSIEQKTERNEKKQQMGKEYREKIEAELQDICNDVLELLDKYLILNATQAESKVFY 120
Query: 565 LKMKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFY 744
LKMKGDYFRYLSEVASG+NKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFY
Sbjct: 121 LKMKGDYFRYLSEVASGENKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFY 180
Query: 745 YEILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTS 900
YEILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTS
Sbjct: 181 YEILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTS 232
>ref|NP_035870.1| 14-3-3 protein zeta/delta [Mus musculus].
Length = 245
Score = 406 bits (1044), Expect = e-113
Identities = 205/230 (89%), Positives = 219/230 (95%)
Frame = +1
Query: 211 MDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSSWR 390
MDK+ELVQKAKLAEQAERYDDMAA MK+VTEQG ELSNEERNLLSVAYKNVVGARRSSWR
Sbjct: 1 MDKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSWR 60
Query: 391 VISSIEQKTERNEKKQQMGKEYREKIEAELQDICNDVLELLDKYLIPNATQPESKVFYLK 570
V+SSIEQKTE EKKQQM +EYREKIE EL+DICNDVL LL+K+LIPNA+QPESKVFYLK
Sbjct: 61 VVSSIEQKTEGAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQPESKVFYLK 120
Query: 571 MKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE 750
MKGDY+RYL+EVA+GD+K+ V SQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE
Sbjct: 121 MKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE 180
Query: 751 ILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTS 900
ILNSPEKACSLAKTAFDEAIAELDTL+EESYKDSTLIMQLLRDNLTLWTS
Sbjct: 181 ILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTS 230
>ref|XP_001473550.2| PREDICTED: 14-3-3 protein theta-like [Mus musculus].
Length = 319
Score = 387 bits (993), Expect = e-107
Identities = 193/239 (80%), Positives = 215/239 (89%)
Frame = +1
Query: 184 PCSPPTGMTMDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNV 363
P + M+K+EL+QKAKLAEQAERYDDMA MKAVTEQG ELSNEERNLLSVAYKNV
Sbjct: 66 PARRSPSLAMEKTELIQKAKLAEQAERYDDMATCMKAVTEQGAELSNEERNLLSVAYKNV 125
Query: 364 VGARRSSWRVISSIEQKTERNEKKQQMGKEYREKIEAELQDICNDVLELLDKYLIPNATQ 543
VG RRS+WRVISSIEQKT+ ++KK Q+ K+YREK+E+EL+ IC VLELLDKYLI NAT
Sbjct: 126 VGGRRSAWRVISSIEQKTDTSDKKLQLIKDYREKVESELRSICTTVLELLDKYLIANATN 185
Query: 544 PESKVFYLKMKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLA 723
PESKVFYLKMKGDYFRYL+EVA GD+++ T+ NSQ AYQEAF+ISKKEMQPTHPIRLGLA
Sbjct: 186 PESKVFYLKMKGDYFRYLAEVACGDDQKQTIENSQGAYQEAFDISKKEMQPTHPIRLGLA 245
Query: 724 LNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTS 900
LNFSVFYYEILN+PE AC+LAKTAFDEAIAELDTLNE+SYKDSTLIMQLLRDNLTLWTS
Sbjct: 246 LNFSVFYYEILNNPELACTLAKTAFDEAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTS 304
>ref|XP_003085851.1| PREDICTED: 14-3-3 protein theta-like [Mus musculus].
Length = 245
Score = 385 bits (990), Expect = e-107
Identities = 192/230 (83%), Positives = 213/230 (92%)
Frame = +1
Query: 211 MDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSSWR 390
M+K+EL+QKAKLAEQAERYDDMA MKAVTEQG ELSNEERNLLSVAYKNVVG RRS+WR
Sbjct: 1 MEKTELIQKAKLAEQAERYDDMATCMKAVTEQGAELSNEERNLLSVAYKNVVGGRRSAWR 60
Query: 391 VISSIEQKTERNEKKQQMGKEYREKIEAELQDICNDVLELLDKYLIPNATQPESKVFYLK 570
VISSIEQKT+ ++KK Q+ K+YREK+E+EL+ IC VLELLDKYLI NAT PESKVFYLK
Sbjct: 61 VISSIEQKTDTSDKKLQLIKDYREKVESELRSICTTVLELLDKYLIANATNPESKVFYLK 120
Query: 571 MKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE 750
MKGDYFRYL+EVA GD+++ T+ NSQ AYQEAF+ISKKEMQPTHPIRLGLALNFSVFYYE
Sbjct: 121 MKGDYFRYLAEVACGDDRKQTIENSQGAYQEAFDISKKEMQPTHPIRLGLALNFSVFYYE 180
Query: 751 ILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTS 900
ILN+PE AC+LAKTAFDEAIAELDTLNE+SYKDSTLIMQLLRDNLTLWTS
Sbjct: 181 ILNNPELACTLAKTAFDEAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTS 230
>ref|XP_003085853.1| PREDICTED: 14-3-3 protein theta-like [Mus musculus].
Length = 245
Score = 385 bits (990), Expect = e-107
Identities = 192/230 (83%), Positives = 213/230 (92%)
Frame = +1
Query: 211 MDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSSWR 390
M+K+EL+QKAKLAEQAERYDDMA MKAVTEQG ELSNEERNLLSVAYKNVVG RRS+WR
Sbjct: 1 MEKTELIQKAKLAEQAERYDDMATCMKAVTEQGAELSNEERNLLSVAYKNVVGGRRSAWR 60
Query: 391 VISSIEQKTERNEKKQQMGKEYREKIEAELQDICNDVLELLDKYLIPNATQPESKVFYLK 570
VISSIEQKT+ ++KK Q+ K+YREK+E+EL+ IC VLELLDKYLI NAT PESKVFYLK
Sbjct: 61 VISSIEQKTDTSDKKLQLIKDYREKVESELRSICTTVLELLDKYLIANATNPESKVFYLK 120
Query: 571 MKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE 750
MKGDYFRYL+EVA GD+++ T+ NSQ AYQEAF+ISKKEMQPTHPIRLGLALNFSVFYYE
Sbjct: 121 MKGDYFRYLAEVACGDDRKQTIENSQGAYQEAFDISKKEMQPTHPIRLGLALNFSVFYYE 180
Query: 751 ILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTS 900
ILN+PE AC+LAKTAFDEAIAELDTLNE+SYKDSTLIMQLLRDNLTLWTS
Sbjct: 181 ILNNPELACTLAKTAFDEAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTS 230
>ref|XP_003085854.1| PREDICTED: 14-3-3 protein theta-like [Mus musculus].
Length = 245
Score = 385 bits (990), Expect = e-107
Identities = 192/230 (83%), Positives = 213/230 (92%)
Frame = +1
Query: 211 MDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSSWR 390
M+K+EL+QKAKLAEQAERYDDMA MKAVTEQG ELSNEERNLLSVAYKNVVG RRS+WR
Sbjct: 1 MEKTELIQKAKLAEQAERYDDMATCMKAVTEQGAELSNEERNLLSVAYKNVVGGRRSAWR 60
Query: 391 VISSIEQKTERNEKKQQMGKEYREKIEAELQDICNDVLELLDKYLIPNATQPESKVFYLK 570
VISSIEQKT+ ++KK Q+ K+YREK+E+EL+ IC VLELLDKYLI NAT PESKVFYLK
Sbjct: 61 VISSIEQKTDTSDKKLQLIKDYREKVESELRSICTTVLELLDKYLIANATNPESKVFYLK 120
Query: 571 MKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE 750
MKGDYFRYL+EVA GD+++ T+ NSQ AYQEAF+ISKKEMQPTHPIRLGLALNFSVFYYE
Sbjct: 121 MKGDYFRYLAEVACGDDRKQTIENSQGAYQEAFDISKKEMQPTHPIRLGLALNFSVFYYE 180
Query: 751 ILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTS 900
ILN+PE AC+LAKTAFDEAIAELDTLNE+SYKDSTLIMQLLRDNLTLWTS
Sbjct: 181 ILNNPELACTLAKTAFDEAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTS 230
>ref|XP_003085852.1| PREDICTED: 14-3-3 protein theta-like [Mus musculus].
Length = 245
Score = 385 bits (990), Expect = e-107
Identities = 192/230 (83%), Positives = 213/230 (92%)
Frame = +1
Query: 211 MDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSSWR 390
M+K+EL+QKAKLAEQAERYDDMA MKAVTEQG ELSNEERNLLSVAYKNVVG RRS+WR
Sbjct: 1 MEKTELIQKAKLAEQAERYDDMATCMKAVTEQGAELSNEERNLLSVAYKNVVGGRRSAWR 60
Query: 391 VISSIEQKTERNEKKQQMGKEYREKIEAELQDICNDVLELLDKYLIPNATQPESKVFYLK 570
VISSIEQKT+ ++KK Q+ K+YREK+E+EL+ IC VLELLDKYLI NAT PESKVFYLK
Sbjct: 61 VISSIEQKTDTSDKKLQLIKDYREKVESELRSICTTVLELLDKYLIANATNPESKVFYLK 120
Query: 571 MKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE 750
MKGDYFRYL+EVA GD+++ T+ NSQ AYQEAF+ISKKEMQPTHPIRLGLALNFSVFYYE
Sbjct: 121 MKGDYFRYLAEVACGDDRKQTIENSQGAYQEAFDISKKEMQPTHPIRLGLALNFSVFYYE 180
Query: 751 ILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTS 900
ILN+PE AC+LAKTAFDEAIAELDTLNE+SYKDSTLIMQLLRDNLTLWTS
Sbjct: 181 ILNNPELACTLAKTAFDEAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTS 230
>ref|XP_003085850.1| PREDICTED: 14-3-3 protein theta-like [Mus musculus].
Length = 245
Score = 385 bits (990), Expect = e-107
Identities = 192/230 (83%), Positives = 213/230 (92%)
Frame = +1
Query: 211 MDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSSWR 390
M+K+EL+QKAKLAEQAERYDDMA MKAVTEQG ELSNEERNLLSVAYKNVVG RRS+WR
Sbjct: 1 MEKTELIQKAKLAEQAERYDDMATCMKAVTEQGAELSNEERNLLSVAYKNVVGGRRSAWR 60
Query: 391 VISSIEQKTERNEKKQQMGKEYREKIEAELQDICNDVLELLDKYLIPNATQPESKVFYLK 570
VISSIEQKT+ ++KK Q+ K+YREK+E+EL+ IC VLELLDKYLI NAT PESKVFYLK
Sbjct: 61 VISSIEQKTDTSDKKLQLIKDYREKVESELRSICTTVLELLDKYLIANATNPESKVFYLK 120
Query: 571 MKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE 750
MKGDYFRYL+EVA GD+++ T+ NSQ AYQEAF+ISKKEMQPTHPIRLGLALNFSVFYYE
Sbjct: 121 MKGDYFRYLAEVACGDDRKQTIENSQGAYQEAFDISKKEMQPTHPIRLGLALNFSVFYYE 180
Query: 751 ILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTS 900
ILN+PE AC+LAKTAFDEAIAELDTLNE+SYKDSTLIMQLLRDNLTLWTS
Sbjct: 181 ILNNPELACTLAKTAFDEAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTS 230
>ref|NP_035869.1| 14-3-3 protein theta [Mus musculus].
Length = 245
Score = 385 bits (990), Expect = e-107
Identities = 192/230 (83%), Positives = 213/230 (92%)
Frame = +1
Query: 211 MDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSSWR 390
M+K+EL+QKAKLAEQAERYDDMA MKAVTEQG ELSNEERNLLSVAYKNVVG RRS+WR
Sbjct: 1 MEKTELIQKAKLAEQAERYDDMATCMKAVTEQGAELSNEERNLLSVAYKNVVGGRRSAWR 60
Query: 391 VISSIEQKTERNEKKQQMGKEYREKIEAELQDICNDVLELLDKYLIPNATQPESKVFYLK 570
VISSIEQKT+ ++KK Q+ K+YREK+E+EL+ IC VLELLDKYLI NAT PESKVFYLK
Sbjct: 61 VISSIEQKTDTSDKKLQLIKDYREKVESELRSICTTVLELLDKYLIANATNPESKVFYLK 120
Query: 571 MKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE 750
MKGDYFRYL+EVA GD+++ T+ NSQ AYQEAF+ISKKEMQPTHPIRLGLALNFSVFYYE
Sbjct: 121 MKGDYFRYLAEVACGDDRKQTIENSQGAYQEAFDISKKEMQPTHPIRLGLALNFSVFYYE 180
Query: 751 ILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTS 900
ILN+PE AC+LAKTAFDEAIAELDTLNE+SYKDSTLIMQLLRDNLTLWTS
Sbjct: 181 ILNNPELACTLAKTAFDEAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTS 230
>ref|XP_003086040.1| PREDICTED: 14-3-3 protein theta-like [Mus musculus].
Length = 314
Score = 369 bits (948), Expect = e-102
Identities = 192/263 (73%), Positives = 218/263 (82%), Gaps = 6/263 (2%)
Frame = +1
Query: 130 LGKEAVTAPGAPLASF------FAPCSPPTGMTMDKSELVQKAKLAEQAERYDDMAAAMK 291
LGK TA G A+ P + M+K+EL+QKAKLA ERYDDMA MK
Sbjct: 39 LGKMRKTAAGTRFAAAETRRRTLDPARRSPSLAMEKTELIQKAKLAX--ERYDDMATCMK 96
Query: 292 AVTEQGHELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTERNEKKQQMGKEYREKIE 471
AVTEQG ELSNEERNLLSVAYKNVVG RS+WRVISSIEQKT+ ++KK Q+ K+YREK+E
Sbjct: 97 AVTEQGAELSNEERNLLSVAYKNVVGGHRSAWRVISSIEQKTDTSDKKLQLIKDYREKVE 156
Query: 472 AELQDICNDVLELLDKYLIPNATQPESKVFYLKMKGDYFRYLSEVASGDNKQTTVSNSQQ 651
+EL+ IC VLELLDKYLI NAT PESKVFYLKMKGDYFR+L+EVA GD+++ T+ NSQ
Sbjct: 157 SELRSICTTVLELLDKYLIANATNPESKVFYLKMKGDYFRHLAEVACGDDRKQTIENSQG 216
Query: 652 AYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLN 831
AYQEAF+ISKKEMQPTHPI LGLALNFSVFYYEILN+PE AC+LAKTAFDEAIAE+DTLN
Sbjct: 217 AYQEAFDISKKEMQPTHPICLGLALNFSVFYYEILNNPELACTLAKTAFDEAIAEIDTLN 276
Query: 832 EESYKDSTLIMQLLRDNLTLWTS 900
++SYKDSTLIMQLLRDNLTLWTS
Sbjct: 277 KDSYKDSTLIMQLLRDNLTLWTS 299
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 35,802,242
Number of extensions: 876161
Number of successful extensions: 2846
Number of sequences better than 1.0e-05: 14
Number of HSP's gapped: 2816
Number of HSP's successfully gapped: 14
Length of query: 410
Length of database: 15,617,559
Length adjustment: 104
Effective length of query: 306
Effective length of database: 12,493,815
Effective search space: 3823107390
Effective search space used: 3823107390
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007016
(1230 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_001927289.1| PREDICTED: 14-3-3 protein beta/alpha isoform... 455 e-128
Alignment gi|XP_003125437.2| PREDICTED: 14-3-3 protein theta isoform 2 [S... 385 e-107
Alignment gi|XP_003125436.1| PREDICTED: 14-3-3 protein theta isoform 1 [S... 385 e-107
Alignment gi|XP_001928111.1| PREDICTED: 14-3-3 protein eta [Sus scrofa]. 346 1e-95
Alignment gi|NP_001038029.1| 14-3-3 protein sigma [Sus scrofa]. 310 8e-85
Alignment gi|XP_003124444.2| PREDICTED: 14-3-3 protein gamma-like [Sus sc... 305 3e-83
Alignment gi|XP_001927263.2| PREDICTED: 14-3-3 protein zeta/delta [Sus sc... 238 7e-63
Alignment gi|XP_003361720.1| PREDICTED: 14-3-3 protein epsilon-like [Sus ... 208 4e-54
Alignment gi|XP_003354973.1| PREDICTED: 14-3-3 protein theta-like [Sus sc... 198 6e-51
Alignment gi|XP_003354980.1| PREDICTED: 14-3-3 protein theta-like [Sus sc... 153 2e-37
>ref|XP_001927289.1| PREDICTED: 14-3-3 protein beta/alpha isoform 1 [Sus scrofa].
Length = 246
Score = 455 bits (1170), Expect = e-128
Identities = 232/232 (100%), Positives = 232/232 (100%)
Frame = +1
Query: 205 MTMDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSS 384
MTMDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSS
Sbjct: 1 MTMDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSS 60
Query: 385 WRVISSIEQKTERNEKKQQMGKEYREKIEAELQDICNDVLELLDKYLIPNATQPESKVFY 564
WRVISSIEQKTERNEKKQQMGKEYREKIEAELQDICNDVLELLDKYLIPNATQPESKVFY
Sbjct: 61 WRVISSIEQKTERNEKKQQMGKEYREKIEAELQDICNDVLELLDKYLIPNATQPESKVFY 120
Query: 565 LKMKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFY 744
LKMKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFY
Sbjct: 121 LKMKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFY 180
Query: 745 YEILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTS 900
YEILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTS
Sbjct: 181 YEILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTS 232
>ref|XP_003125437.2| PREDICTED: 14-3-3 protein theta isoform 2 [Sus scrofa].
Length = 245
Score = 385 bits (990), Expect = e-107
Identities = 192/230 (83%), Positives = 213/230 (92%)
Frame = +1
Query: 211 MDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSSWR 390
M+K+EL+QKAKLAEQAERYDDMA MKAVTEQG ELSNEERNLLSVAYKNVVG RRS+WR
Sbjct: 1 MEKTELIQKAKLAEQAERYDDMATCMKAVTEQGAELSNEERNLLSVAYKNVVGGRRSAWR 60
Query: 391 VISSIEQKTERNEKKQQMGKEYREKIEAELQDICNDVLELLDKYLIPNATQPESKVFYLK 570
VISSIEQKT+ ++KK Q+ K+YREK+E+EL+ IC VLELLDKYLI NAT PESKVFYLK
Sbjct: 61 VISSIEQKTDTSDKKLQLIKDYREKVESELRSICTTVLELLDKYLIANATNPESKVFYLK 120
Query: 571 MKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE 750
MKGDYFRYL+EVA GD+++ T+ NSQ AYQEAF+ISKKEMQPTHPIRLGLALNFSVFYYE
Sbjct: 121 MKGDYFRYLAEVACGDDRKQTIDNSQGAYQEAFDISKKEMQPTHPIRLGLALNFSVFYYE 180
Query: 751 ILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTS 900
ILN+PE AC+LAKTAFDEAIAELDTLNE+SYKDSTLIMQLLRDNLTLWTS
Sbjct: 181 ILNNPELACTLAKTAFDEAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTS 230
>ref|XP_003125436.1| PREDICTED: 14-3-3 protein theta isoform 1 [Sus scrofa].
Length = 246
Score = 385 bits (989), Expect = e-107
Identities = 192/229 (83%), Positives = 212/229 (92%)
Frame = +1
Query: 214 DKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSSWRV 393
DK+EL+QKAKLAEQAERYDDMA MKAVTEQG ELSNEERNLLSVAYKNVVG RRS+WRV
Sbjct: 3 DKTELIQKAKLAEQAERYDDMATCMKAVTEQGAELSNEERNLLSVAYKNVVGGRRSAWRV 62
Query: 394 ISSIEQKTERNEKKQQMGKEYREKIEAELQDICNDVLELLDKYLIPNATQPESKVFYLKM 573
ISSIEQKT+ ++KK Q+ K+YREK+E+EL+ IC VLELLDKYLI NAT PESKVFYLKM
Sbjct: 63 ISSIEQKTDTSDKKLQLIKDYREKVESELRSICTTVLELLDKYLIANATNPESKVFYLKM 122
Query: 574 KGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEI 753
KGDYFRYL+EVA GD+++ T+ NSQ AYQEAF+ISKKEMQPTHPIRLGLALNFSVFYYEI
Sbjct: 123 KGDYFRYLAEVACGDDRKQTIDNSQGAYQEAFDISKKEMQPTHPIRLGLALNFSVFYYEI 182
Query: 754 LNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTS 900
LN+PE AC+LAKTAFDEAIAELDTLNE+SYKDSTLIMQLLRDNLTLWTS
Sbjct: 183 LNNPELACTLAKTAFDEAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTS 231
>ref|XP_001928111.1| PREDICTED: 14-3-3 protein eta [Sus scrofa].
Length = 246
Score = 346 bits (888), Expect = 1e-95
Identities = 179/233 (76%), Positives = 202/233 (86%), Gaps = 4/233 (1%)
Frame = +1
Query: 214 DKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSSWRV 393
D+ +L+Q+A+LAEQAERYDDMA+AMKAVTE LSNE+RNLLSVAYKNVVGARRSSWRV
Sbjct: 3 DREQLLQRARLAEQAERYDDMASAMKAVTELNEPLSNEDRNLLSVAYKNVVGARRSSWRV 62
Query: 394 ISSIEQKT--ERNEKKQQMGKEYREKIEAELQDICNDVLELLDKYLIPNAT--QPESKVF 561
ISSIEQKT + NEKK + K YREKIE EL+ +CNDVL LLDK+LI N Q ESKVF
Sbjct: 63 ISSIEQKTMADGNEKKLEKVKAYREKIEKELETVCNDVLALLDKFLIKNCNDFQYESKVF 122
Query: 562 YLKMKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVF 741
YLKMKGDY+RYL+EVASG+ K + V S+ AY+EAFEISK+ MQPTHPIRLGLALNFSVF
Sbjct: 123 YLKMKGDYYRYLAEVASGEKKNSVVEASEAAYKEAFEISKEHMQPTHPIRLGLALNFSVF 182
Query: 742 YYEILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTS 900
YYEI N+PE+AC LAK AFD+AIAELDTLNE+SYKDSTLIMQLLRDNLTLWTS
Sbjct: 183 YYEIQNAPEQACLLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTS 235
>ref|NP_001038029.1| 14-3-3 protein sigma [Sus scrofa].
Length = 248
Score = 310 bits (795), Expect = 8e-85
Identities = 156/232 (67%), Positives = 197/232 (84%), Gaps = 2/232 (0%)
Frame = +1
Query: 211 MDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSSWR 390
M+++ ++QKAKLAEQAERY+DMAA MK+ E+G ELS EERNLLSVAYKNVVG +R++WR
Sbjct: 1 MERASVIQKAKLAEQAERYEDMAAFMKSAVEKGEELSCEERNLLSVAYKNVVGGQRAAWR 60
Query: 391 VISSIEQKT--ERNEKKQQMGKEYREKIEAELQDICNDVLELLDKYLIPNATQPESKVFY 564
V+SSIEQK+ E +E+K +EYREK+E EL+ +C+ VL LL+ +LI A ES+VFY
Sbjct: 61 VLSSIEQKSNEEGSEEKGPEVREYREKVEKELRGVCDTVLGLLNTHLIKEAGDAESRVFY 120
Query: 565 LKMKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFY 744
LKMKGDY+RYL+EVA+GD+K+ + +++ AYQEA +ISKKEM PT+PIRLGLALNF VF+
Sbjct: 121 LKMKGDYYRYLAEVATGDDKKRIIDSARSAYQEAMDISKKEMPPTNPIRLGLALNFYVFH 180
Query: 745 YEILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTS 900
YEI NSPE+A SLAKT FDEA+A+L TL+E+SYKDSTLIMQLLRDNLTLWT+
Sbjct: 181 YEIANSPEEAISLAKTTFDEAMADLHTLSEDSYKDSTLIMQLLRDNLTLWTA 232
>ref|XP_003124444.2| PREDICTED: 14-3-3 protein gamma-like [Sus scrofa].
Length = 241
Score = 305 bits (782), Expect = 3e-83
Identities = 158/206 (76%), Positives = 177/206 (85%), Gaps = 4/206 (1%)
Frame = +1
Query: 295 VTEQGHELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKT--ERNEKKQQMGKEYREKI 468
VTE LSNEERNLLSVAYKNVVGARRSSWRVISSIEQKT + NEKK +M + YREKI
Sbjct: 24 VTELNEPLSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTSADGNEKKIEMVRAYREKI 83
Query: 469 EAELQDICNDVLELLDKYLIPNA--TQPESKVFYLKMKGDYFRYLSEVASGDNKQTTVSN 642
E EL+ +C DVL LLD YLI N TQ ESKVFYLKMKGDY+RYL+EVA+G+ + T V +
Sbjct: 84 EKELEAVCQDVLSLLDNYLIKNCSETQYESKVFYLKMKGDYYRYLAEVATGEKRATVVES 143
Query: 643 SQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELD 822
S++AY EA EISK+ MQPTHPIRLGLALN+SVFYYEI N+PE+AC LAKTAFD+AIAELD
Sbjct: 144 SEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDDAIAELD 203
Query: 823 TLNEESYKDSTLIMQLLRDNLTLWTS 900
TLNE+SYKDSTLIMQLLRDNLTLWTS
Sbjct: 204 TLNEDSYKDSTLIMQLLRDNLTLWTS 229
>ref|XP_001927263.2| PREDICTED: 14-3-3 protein zeta/delta [Sus scrofa].
Length = 286
Score = 238 bits (606), Expect = 7e-63
Identities = 118/135 (87%), Positives = 127/135 (94%)
Frame = +1
Query: 496 DVLELLDKYLIPNATQPESKVFYLKMKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEI 675
D LL+K+LIPNA+Q ESKVFYLKMKGDY+RYL+EVA+GD+K+ V SQQAYQEAFEI
Sbjct: 137 DAKSLLEKFLIPNASQAESKVFYLKMKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEI 196
Query: 676 SKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLNEESYKDST 855
SKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTL+EESYKDST
Sbjct: 197 SKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLSEESYKDST 256
Query: 856 LIMQLLRDNLTLWTS 900
LIMQLLRDNLTLWTS
Sbjct: 257 LIMQLLRDNLTLWTS 271
>ref|XP_003361720.1| PREDICTED: 14-3-3 protein epsilon-like [Sus scrofa].
Length = 232
Score = 208 bits (530), Expect = 4e-54
Identities = 107/181 (59%), Positives = 134/181 (74%), Gaps = 2/181 (1%)
Frame = +1
Query: 274 MAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTERN--EKKQQMG 447
M +MK V EL+ EERNLLSVAYKNV+GARR+SWR+ISSIEQK E E K +M
Sbjct: 1 MVESMKKVAGMDVELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEENKGGEDKLKMI 60
Query: 448 KEYREKIEAELQDICNDVLELLDKYLIPNATQPESKVFYLKMKGDYFRYLSEVASGDNKQ 627
+EYR+ +E EL+ IC D+L++LDK+LIP A ESKVFY KMKGDY RYL+E A+G++++
Sbjct: 61 REYRQMVETELKLICCDILDVLDKHLIPAANTGESKVFYYKMKGDYHRYLAEFATGNDRK 120
Query: 628 TTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEA 807
NS AY+ A +I+ E+ PTHPIRLGLALNFSVFYYEILNSP++AC K E
Sbjct: 121 EAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACREEKNGMREL 180
Query: 808 I 810
+
Sbjct: 181 V 181
>ref|XP_003354973.1| PREDICTED: 14-3-3 protein theta-like [Sus scrofa].
Length = 125
Score = 198 bits (503), Expect = 6e-51
Identities = 96/110 (87%), Positives = 105/110 (95%)
Frame = +1
Query: 571 MKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE 750
MKGDYFRYL+EVA GD+++ T+ NSQ AYQEAF+ISKKEMQPTHPIRLGLALNFSVFYYE
Sbjct: 1 MKGDYFRYLAEVACGDDRKQTIDNSQGAYQEAFDISKKEMQPTHPIRLGLALNFSVFYYE 60
Query: 751 ILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTS 900
ILN+PE AC+LAKTAFDEAIAELDTLNE+SYKDSTLIMQLLRDNLTLWTS
Sbjct: 61 ILNNPELACTLAKTAFDEAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTS 110
>ref|XP_003354980.1| PREDICTED: 14-3-3 protein theta-like [Sus scrofa].
Length = 152
Score = 153 bits (387), Expect = 2e-37
Identities = 76/98 (77%), Positives = 88/98 (89%)
Frame = +1
Query: 211 MDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSSWR 390
M+K+EL+QKAKLAEQAERYDDMA MKAVTEQG ELSNEERNLLSVAYKNVVG RRS+WR
Sbjct: 1 MEKTELIQKAKLAEQAERYDDMATCMKAVTEQGAELSNEERNLLSVAYKNVVGGRRSAWR 60
Query: 391 VISSIEQKTERNEKKQQMGKEYREKIEAELQDICNDVL 504
VISSIEQKT+ ++KK Q+ K+YREK+E+EL+ IC VL
Sbjct: 61 VISSIEQKTDTSDKKLQLIKDYREKVESELRSICTTVL 98
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 27,537,445
Number of extensions: 828533
Number of successful extensions: 2133
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 2122
Number of HSP's successfully gapped: 10
Length of query: 410
Length of database: 11,343,932
Length adjustment: 101
Effective length of query: 309
Effective length of database: 8,829,335
Effective search space: 2728264515
Effective search space used: 2728264515
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007016
(1230 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr17 605 e-170
Sscrofa_Chr15 561 e-157
Sscrofa_Chr03 109 4e-21
Sscrofa_Chr04 98 1e-17
Sscrofa_Chr14 82 8e-13
Sscrofa_Chr06 62 8e-07
>Sscrofa_Chr17
|| Length = 69701581
Score = 605 bits (305), Expect = e-170
Identities = 305/305 (100%)
Strand = Plus / Plus
Query: 201 gggaatgaccatggataaaagtgagctggtacagaaagccaaactcgccgagcaggctga 260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52808442 gggaatgaccatggataaaagtgagctggtacagaaagccaaactcgccgagcaggctga 52808501
Query: 261 gcgctatgatgacatggccgcggccatgaaggcagtcacggagcaggggcacgaactctc 320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52808502 gcgctatgatgacatggccgcggccatgaaggcagtcacggagcaggggcacgaactctc 52808561
Query: 321 caacgaggagagaaacctgctctccgtcgcctacaagaacgtagtcggtgcccgccgttc 380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52808562 caacgaggagagaaacctgctctccgtcgcctacaagaacgtagtcggtgcccgccgttc 52808621
Query: 381 ttcctggcgtgtcatctccagcatcgagcagaaaacagagaggaacgagaagaagcagca 440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52808622 ttcctggcgtgtcatctccagcatcgagcagaaaacagagaggaacgagaagaagcagca 52808681
Query: 441 gatgggcaaagagtaccgtgagaagatcgaggcagagctgcaggacatctgtaacgatgt 500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52808682 gatgggcaaagagtaccgtgagaagatcgaggcagagctgcaggacatctgtaacgatgt 52808741
Query: 501 tctgg 505
|||||
Sbjct: 52808742 tctgg 52808746
Score = 385 bits (194), Expect = e-104
Identities = 305/345 (88%), Gaps = 3/345 (0%)
Strand = Plus / Plus
Query: 889 ctgtggacgtcggaaaaccagggagatgaaggcgatactggggagggagagaactaatgt 948
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52813809 ctgtggacgtcggaaaaccagggagatgaaggcgatactggggagggagagaactaatgt 52813868
Query: 949 ctgtcgtgctgcgtgatctcttcagtgtcactctgtaccctccacatatacccctttgtg 1008
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52813869 ctgtcgtgctgcgtgatctcttcagtgtcactctgtaccctccacatatacccctttgtg 52813928
Query: 1009 cgat-nnnnnnnnnnnnnnnnnnnnncgtcgacttccaatttttcacagcctcagcctag 1067
|||| ||||||||||||||||||||||||||||||||||
Sbjct: 52813929 cgataaaaaaaaaaaaaagaatcgtacgtcgacttccaatttttcacagcctcagcctag 52813988
Query: 1068 cgaaaatggtccatgggataaacagctggtatttgtatcaaaaactcaaattggtcccat 1127
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||
Sbjct: 52813989 cgaaaatggtccatgggataaacagctggtatttgtatcaaaaactcagattggtcacat 52814048
Query: 1128 c-atgccacgggcatcccaaa-tttgatttcgattaacctgaacaggattacggtgttta 1185
| ||||||||| ||||||| |||||||||||||||| | |||||||||| |||||||
Sbjct: 52814049 caatgccacggcattcccaaattttgatttcgattaacattgacaggattactgtgttta 52814108
Query: 1186 attttttaaaaaccgaaacccggggattatggggttttggaattt 1230
|||||||||||| | ||| | | ||||||||||||||| |||||
Sbjct: 52814109 attttttaaaaaactgaacactgtgattatggggttttgtaattt 52814153
Score = 327 bits (165), Expect = 8e-87
Identities = 165/165 (100%)
Strand = Plus / Plus
Query: 629 ccactgtgtcgaactcccagcaggcctaccaggaagcatttgaaattagtaagaaagaaa 688
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52812378 ccactgtgtcgaactcccagcaggcctaccaggaagcatttgaaattagtaagaaagaaa 52812437
Query: 689 tgcagcctacacacccaattcgactgggcctggcacttaatttctccgtcttttactatg 748
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52812438 tgcagcctacacacccaattcgactgggcctggcacttaatttctccgtcttttactatg 52812497
Query: 749 agattctaaactctcctgaaaaggcttgcagcctggcaaaaacgg 793
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52812498 agattctaaactctcctgaaaaggcttgcagcctggcaaaaacgg 52812542
Score = 248 bits (125), Expect = 6e-63
Identities = 125/125 (100%)
Strand = Plus / Plus
Query: 504 ggagctgttggacaaatacctaattcccaatgctacacaaccagaaagtaaggtgttcta 563
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52810917 ggagctgttggacaaatacctaattcccaatgctacacaaccagaaagtaaggtgttcta 52810976
Query: 564 cttgaaaatgaaaggagattattttagatatctttctgaggtggcgtctggagacaataa 623
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52810977 cttgaaaatgaaaggagattattttagatatctttctgaggtggcgtctggagacaataa 52811036
Query: 624 acaaa 628
|||||
Sbjct: 52811037 acaaa 52811041
Score = 192 bits (97), Expect = 3e-46
Identities = 97/97 (100%)
Strand = Plus / Plus
Query: 792 ggcatttgatgaagcaattgctgaattggacaccctgaatgaagagtcctacaaagacag 851
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52813411 ggcatttgatgaagcaattgctgaattggacaccctgaatgaagagtcctacaaagacag 52813470
Query: 852 caccctgatcatgcagttgctcagggacaatctcact 888
|||||||||||||||||||||||||||||||||||||
Sbjct: 52813471 caccctgatcatgcagttgctcagggacaatctcact 52813507
Score = 167 bits (84), Expect = 2e-38
Identities = 84/84 (100%)
Strand = Plus / Plus
Query: 119 agaggagtgggcttgggaaagaagcggtcaccgcgccgggagctccgctcgcaagctttt 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52794281 agaggagtgggcttgggaaagaagcggtcaccgcgccgggagctccgctcgcaagctttt 52794340
Query: 179 ttgccccctgcagccctcccacgg 202
||||||||||||||||||||||||
Sbjct: 52794341 ttgccccctgcagccctcccacgg 52794364
Score = 73.8 bits (37), Expect = 2e-10
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 1 gagccgaagcggaagtggtgaccggagcggaagtgga 37
|||||||||||||||||||||||||||||||||||||
Sbjct: 52794163 gagccgaagcggaagtggtgaccggagcggaagtgga 52794199
>Sscrofa_Chr15
|| Length = 157681621
Score = 561 bits (283), Expect = e-157
Identities = 439/487 (90%), Gaps = 3/487 (0%)
Strand = Plus / Minus
Query: 183 cccctgcagccctcccacgggaatgaccatggataaaagtgagctggtacagaaagccaa 242
|||||||| || ||||| ||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 92353118 cccctgcacccgtcccatgggaatggccatggataaaagtgagctggtacagaaagccaa 92353059
Query: 243 actcgccgagcaggctgagcgctatgatgacatggccgcggccatgaaggcagtcacgga 302
|||| |||||||||| |||| ||||||||||||||| | |||||||| |||||||| ||
Sbjct: 92353058 actcaccgagcaggcagagctctatgatgacatggctgaggccatga-ggcagtcatcga 92353000
Query: 303 gcaggggcacgaactctccaacgaggagagaaacctgctctccgtcgcctacaagaacgt 362
||||||| | ||||||||||| ||||||||||| |||||||| || ||||| ||||| |
Sbjct: 92352999 gcaggggtatgaactctccaatgaggagagaaatctgctctctgttgccta-aagaatat 92352941
Query: 363 agtcggtgcccgccgttcttcctggcgtgtcatctccagcatcgagcagaaaacagagag 422
|| || |||| || |||||| |||| ||||||||||||||| ||||| ||||||||||
Sbjct: 92352940 cgttggagcccacctttcttcttggcatgtcatctccagcatacagcaggaaacagagag 92352881
Query: 423 gaacgagaagaagcagcagatgggcaaagagtaccgtgagaagatcgaggcagagctgca 482
|||| || || |||||||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct: 92352880 gaaccaggagcagcagcagatgggcaaagagtaccgtgagaagattgaggcagagct-ca 92352822
Query: 483 ggacatctgtaacgatgttctggagctgttggacaaatacctaattcccaatgctacaca 542
|||||||| ||| |||||||||||||| |||||||||||||||||| ||||||||| | |
Sbjct: 92352821 ggacatctttaatgatgttctggagcttttggacaaatacctaatttccaatgctatata 92352762
Query: 543 accagaaagtaaggtgttctacttgaaaatgaaaggagattattttagatatctttctga 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92352761 accagaaagtaaggtgttctacttgaaaatgaaaggagattattttagatatctttctga 92352702
Query: 603 ggtggcgtctggagacaataaacaaaccactgtgtcgaactcccagcaggcctaccagga 662
|||||| |||||||||||||||||||||||||||| || ||||||| |||| || |||||
Sbjct: 92352701 ggtggcatctggagacaataaacaaaccactgtgtagagctcccagtaggcttatcagga 92352642
Query: 663 agcattt 669
|||||||
Sbjct: 92352641 agcattt 92352635
Score = 426 bits (215), Expect = e-116
Identities = 321/354 (90%), Gaps = 3/354 (0%)
Strand = Plus / Minus
Query: 661 gaagcatttgaaattagtaagaaagaaatgcagcctacacacccaattcgactgggcctg 720
||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||
Sbjct: 92350954 gaagcatttgaaattagtaagaaagaaatgcagcctacatgcccaatttgactgggcctg 92350895
Query: 721 gcacttaatttctccgtcttttactatgagattctaaactctcctgaaaaggcttgcagc 780
||||| |||||||| ||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 92350894 gcactgaatttctctgtcttctactatgagattctaaactctcctgaaaatgcttgcagc 92350835
Query: 781 ctggcaaaaacggcatttgatgaagcaattgctgaattggacaccctgaatgaagagtcc 840
|||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 92350834 ctggcaaaaaaggcatttgatgaagcaattgctgaattggacaccccgaatgaagagtcc 92350775
Query: 841 tacaaagacag--caccctgatcatgcagttgctcagggacaatctcactctgtggacgt 898
||||||||||| ||||||||||||||||||||| ||||||| ||| ||| |||| ||
Sbjct: 92350774 tacaaagacagcacaccctgatcatgcagttgcttagggacagtctttctc-atggatgt 92350716
Query: 899 cggaaaaccagggagatgaaggcgatactggggagggagagaactaatgtctgtcgtgct 958
| |||||||||||||| ||||| ||| ||||||||||||||||||||| ||||| ||||
Sbjct: 92350715 cagaaaaccagggagaggaaggagatgctggggagggagagaactaattcctgtcatgct 92350656
Query: 959 gcgtgatctcttcagtgtcactctgtaccctccacatatacccctttgtgcgat 1012
| ||| ||||||||||||||||| ||| ||||| |||| |||||||||||||
Sbjct: 92350655 tcatgacctcttcagtgtcactctttacactccatgtatatccctttgtgcgat 92350602
Score = 91.7 bits (46), Expect = 9e-16
Identities = 71/78 (91%), Gaps = 1/78 (1%)
Strand = Plus / Minus
Query: 1044 caatttttcacagcctcagcctagcgaaaatggtccatgggataaacagctggtatttgt 1103
|||||||||| |||||||||||||| ||||||||| ||||||||||||||||||||| |
Sbjct: 92350568 caatttttcatagcctcagcctagc-aaaatggtctatgggataaacagctggtattcgg 92350510
Query: 1104 atcaaaaactcaaattgg 1121
||| |||||||| |||||
Sbjct: 92350509 atctaaaactcagattgg 92350492
>Sscrofa_Chr03
|| Length = 144787322
Score = 109 bits (55), Expect = 4e-21
Identities = 139/167 (83%)
Strand = Plus / Minus
Query: 247 gccgagcaggctgagcgctatgatgacatggccgcggccatgaaggcagtcacggagcag 306
||||||||||| |||||||| || ||||||||| | ||||||||| || |||||||||
Sbjct: 135278587 gccgagcaggccgagcgctacgacgacatggccacctgcatgaaggccgtgacggagcag 135278528
Query: 307 gggcacgaactctccaacgaggagagaaacctgctctccgtcgcctacaagaacgtagtc 366
|| ||| || |||||||||||| | ||||||||||| || |||||||||||||| |||
Sbjct: 135278527 ggcgccgagctgtccaacgaggagcgcaacctgctctcggtggcctacaagaacgtggtc 135278468
Query: 367 ggtgcccgccgttcttcctggcgtgtcatctccagcatcgagcagaa 413
|| | |||| | || ||||| | |||||||| ||||||||||||||
Sbjct: 135278467 gggggccgcaggtccgcctggagggtcatctcgagcatcgagcagaa 135278421
Score = 79.8 bits (40), Expect = 3e-12
Identities = 82/96 (85%)
Strand = Plus / Minus
Query: 792 ggcatttgatgaagcaattgctgaattggacaccctgaatgaagagtcctacaaagacag 851
|||||||||||| || ||||| || | ||||| ||||| ||||| || |||||||||||
Sbjct: 135247049 ggcatttgatgaggccattgcagagctcgacacactgaacgaagactcatacaaagacag 135246990
Query: 852 caccctgatcatgcagttgctcagggacaatctcac 887
|||||| |||||||||||||| || ||||| |||||
Sbjct: 135246989 caccctcatcatgcagttgcttagagacaacctcac 135246954
Score = 60.0 bits (30), Expect = 3e-06
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 250 gagcaggctgagcgctatgatgacatggccgcggccatgaag 291
|||||||| |||||||| || |||||||||||||||||||||
Sbjct: 9882899 gagcaggcggagcgctacgacgacatggccgcggccatgaag 9882940
Score = 60.0 bits (30), Expect = 3e-06
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 679 aagaaagaaatgcagcctacacacccaattcgactgggcctggcacttaatttctccgtc 738
|||||||| ||||| || |||||||| || || ||||| ||||| ||||| ||||| ||
Sbjct: 135247885 aagaaagagatgcaacccacacaccccatccgcctggggctggctcttaacttctctgta 135247826
Query: 739 ttttactatgagat 752
||||||||||||||
Sbjct: 135247825 ttttactatgagat 135247812
>Sscrofa_Chr04
|| Length = 143465943
Score = 97.6 bits (49), Expect = 1e-17
Identities = 64/69 (92%)
Strand = Plus / Plus
Query: 210 catggataaaagtgagctggtacagaaagccaaactcgccgagcaggctgagcgctatga 269
||||||||||| ||||||||| ||||| |||||||| ||||||||||||||||| |||||
Sbjct: 38917855 catggataaaaatgagctggtgcagaaggccaaactggccgagcaggctgagcgatatga 38917914
Query: 270 tgacatggc 278
|||||||||
Sbjct: 38917915 tgacatggc 38917923
>Sscrofa_Chr14
|| Length = 153851969
Score = 81.8 bits (41), Expect = 8e-13
Identities = 86/101 (85%)
Strand = Plus / Plus
Query: 316 ctctccaacgaggagagaaacctgctctccgtcgcctacaagaacgtagtcggtgcccgc 375
|||||||| ||||| ||||||| ||||| || ||||||||||| || |||||||||||
Sbjct: 51872349 ctctccaatgaggaccgaaacctcctctctgtggcctacaagaatgtggtcggtgcccgg 51872408
Query: 376 cgttcttcctggcgtgtcatctccagcatcgagcagaaaac 416
|| ||||||||| | |||||| |||||| |||||||||||
Sbjct: 51872409 cggtcttcctggagggtcatcagcagcattgagcagaaaac 51872449
Score = 65.9 bits (33), Expect = 5e-08
Identities = 84/101 (83%)
Strand = Plus / Plus
Query: 652 gcctaccaggaagcatttgaaattagtaagaaagaaatgcagcctacacacccaattcga 711
|||||| ||||||| ||||||||||| || | | |||||||| |||||||| || ||
Sbjct: 51872697 gcctacaaggaagcctttgaaattagcaaagagcacatgcagccgacacaccccatccgg 51872756
Query: 712 ctgggcctggcacttaatttctccgtcttttactatgagat 752
||||||||||| || || |||||||| || |||||||||||
Sbjct: 51872757 ctgggcctggccctcaacttctccgtgttctactatgagat 51872797
>Sscrofa_Chr06
|| Length = 157765593
Score = 61.9 bits (31), Expect = 8e-07
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 838 tcctacaaagacagcaccctgatcatgcagttgctcagggacaatctcactctgtggac 896
|||||||||||||||||||| ||||||||| |||| ||||||| || || ||||||||
Sbjct: 77759395 tcctacaaagacagcaccctcatcatgcagctgctgcgggacaacctgacgctgtggac 77759453
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 34,005,462
Number of extensions: 287
Number of successful extensions: 287
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 279
Number of HSP's successfully gapped: 19
Length of query: 1230
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1209
Effective length of database: 2,808,413,156
Effective search space: 3395371505604
Effective search space used: 3395371505604
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)