Animal-Genome cDNA 20110601C-007023


Search to RefSeqBP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-007023
         (1363 letters)

Database: RefSeq49_BP.fasta 
           33,088 sequences; 17,681,374 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001136389.1| fibrinogen beta chain [Bos taurus].               500   e-144
Alignment   gi|NP_001039562.1| fibroleukin precursor [Bos taurus].                75   1e-27
Alignment   gi|NP_776336.1| fibrinogen gamma-B chain precursor [Bos taurus].      94   4e-27
Alignment   gi|NP_001068894.1| angiopoietin-related protein 1 precursor [Bo...    66   8e-24
Alignment   gi|NP_001014909.1| angiopoietin-related protein 7 precursor [Bo...    68   6e-23
Alignment   gi|NP_001070265.1| angiopoietin-1 precursor [Bos taurus].             66   5e-22
Alignment   gi|XP_002707737.1| PREDICTED: microfibrillar-associated protein...    70   2e-21
Alignment   gi|NP_001010996.1| ficolin-2 precursor [Bos taurus].                  63   3e-21
Alignment   gi|XP_610224.4| PREDICTED: microfibrillar-associated protein 4-...    70   9e-19
Alignment   gi|NP_001192770.1| tenascin-N [Bos taurus].                           58   2e-17

>ref|NP_001136389.1| fibrinogen beta chain [Bos taurus].
          Length = 495

 Score =  500 bits (1287), Expect(2) = e-144
 Identities = 257/422 (60%), Positives = 299/422 (70%), Gaps = 4/422 (0%)
 Frame = +2

Query: 59   MVSWDFQKLKIMKPXXXXXXCVFIIKAQAAIDYDEDEDGRPKVHVDARGHRPYDKRREEA 238
            M+S +F+K K MK       C FI++AQ   DYDE +D RPKV + ARGHRPYDK++EEA
Sbjct: 1    MISCNFEKFKTMKHLLLLLFCAFIVQAQFPTDYDEGQDDRPKVGLGARGHRPYDKKKEEA 60

Query: 239  PSLRPVAPPISAGGYQPRPAKVAIGQKKVERKPPDAGGCLHADPDLGVLCPTGCQLQDTL 418
            PSLRPV PPIS GGY+ RPA   +GQKKVERKPPDA GCLHADPDLGVLCPTGC+LQDTL
Sbjct: 61   PSLRPVPPPISGGGYRARPATATVGQKKVERKPPDADGCLHADPDLGVLCPTGCKLQDTL 120

Query: 419  LKQERPIKTSIEELNXXXXXXXXXXXXTFQYMTLLKRLWKDRQKQRRDNENVINEFSSEL 598
            ++QERPI+ SIE+L             TFQY+TLLK +WK RQ Q +DNENV+NE+SS L
Sbjct: 121  VRQERPIRKSIEDLRNTVDSVSRTSSSTFQYITLLKNMWKGRQNQVQDNENVVNEYSSHL 180

Query: 599  EKHQLYIDETVNSNIPTNLRVLRAILENLRSKIQKLESDVLAQMEYCRTPCTVTCNIPVV 778
            EKHQLYIDETV +NIPT LRVLR+ILENLRSKIQKLESDV  QMEYCRTPCTVTCNIPVV
Sbjct: 181  EKHQLYIDETVKNNIPTKLRVLRSILENLRSKIQKLESDVSTQMEYCRTPCTVTCNIPVV 240

Query: 779  SGKECEEIIRNGGETSEMYLIQPSDSIEPYRVYCDMKTERGGWTVIQNRQDGSVDFGRKW 958
            SGKECEEIIRNGGETSEMYLIQP DS +PYRVYCDMKTE+GGWTVIQNRQDGSVDFGRKW
Sbjct: 241  SGKECEEIIRNGGETSEMYLIQPEDSSKPYRVYCDMKTEKGGWTVIQNRQDGSVDFGRKW 300

Query: 959  DPYKQGIWKYCNQCKWEKNI-VAYQVSIGLEMIKLASLPGWDPQSF---*SKWRTGKEAR 1126
            DPYKQG        + +K   V  +  +G +  +++ L    P         W+  K   
Sbjct: 301  DPYKQGFGNIATNAEGKKYCGVPGEYWLGND--RISQLTNMGPTKLLIEMEDWKGDKVTA 358

Query: 1127 *RQSTKDSLCRTKPINTRSR*ANTREQLATPSWKEPLNWWEKTRTMNIHNSMFFSTYNRD 1306
              +         K   + S+   T          + +    + RTM IHNSMFFSTY+RD
Sbjct: 359  LYEGFTVQNEANKYQLSVSKYKGTAGNALIEGASQLVG---ENRTMTIHNSMFFSTYDRD 415

Query: 1307 NE 1312
            N+
Sbjct: 416  ND 417



 Score = 33.1 bits (74), Expect(2) = e-144
 Identities = 12/13 (92%), Positives = 13/13 (100%)
 Frame = +3

Query: 1311 NGWKTTDPRKQCS 1349
            +GWKTTDPRKQCS
Sbjct: 417  DGWKTTDPRKQCS 429


>ref|NP_001039562.1| fibroleukin precursor [Bos taurus].
          Length = 441

 Score = 75.1 bits (183), Expect(3) = 1e-27
 Identities = 48/146 (32%), Positives = 71/146 (48%), Gaps = 6/146 (4%)
 Frame = +2

Query: 557 RDNENVINEFSSELEKHQLYIDETVNSNIPTNLRVLRAILENLRSKIQKLESDVLAQMEY 736
           R+ E  +N+ SS+L+  +  ID         NL  +  I + + SK+  L   V +    
Sbjct: 131 RELEGEVNKLSSDLKNAKEEIDVLQGRLEKLNLVNMNNIEQYVDSKVANLTFVVNSLDGK 190

Query: 737 CRTPCT---VTCNIPVVSG---KECEEIIRNGGETSEMYLIQPSDSIEPYRVYCDMKTER 898
           C + C       ++PV      K+C E    G  +SE+Y + P      + V+CDM+T  
Sbjct: 191 CSSKCPRQEQIQSLPVQQHLIYKDCSEYYTIGKRSSELYRVTPEPRNSSFEVFCDMETMA 250

Query: 899 GGWTVIQNRQDGSVDFGRKWDPYKQG 976
           GGWTV+Q R DGS +F R W  YK G
Sbjct: 251 GGWTVLQARVDGSTNFTRTWQDYKVG 276



 Score = 65.1 bits (157), Expect(3) = 1e-27
 Identities = 31/63 (49%), Positives = 43/63 (68%)
 Frame = +1

Query: 1033 EYWLGNDKISQLTRMGPTKLLIEMEDWEGGKVKAIYEGFTVQNEANKYQISLSKYKGTAG 1212
            E+WLGNDKI  LT+     L I++ED+ G K+ A+Y+ F V NE  KY++ +  Y GTAG
Sbjct: 283  EFWLGNDKIHLLTKSKDMILRIDLEDFNGIKLYALYDHFYVANEFLKYRLHIGNYNGTAG 342

Query: 1213 NAL 1221
            +AL
Sbjct: 343  DAL 345



 Score = 22.3 bits (46), Expect(3) = 1e-27
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +2

Query: 1271 HNSMFFSTYNRDNER 1315
            H+  FF+T +RDN+R
Sbjct: 353  HDLKFFTTPDRDNDR 367


>ref|NP_776336.1| fibrinogen gamma-B chain precursor [Bos taurus].
          Length = 444

 Score = 94.4 bits (233), Expect(2) = 4e-27
 Identities = 56/209 (26%), Positives = 95/209 (45%), Gaps = 1/209 (0%)
 Frame = +2

Query: 353 CLHADPDLGVLCPTGCQLQDTLLKQERPIKTSIEELNXXXXXXXXXXXXTFQYMTLLKRL 532
           C   D   G  CPT C + D L   +  +   +  L               + +  ++  
Sbjct: 32  CCILDERFGSYCPTTCGIADFLNNYQTSVDKDLRTLEGILYQVENKTSEARELVKAIQIS 91

Query: 533 WKDRQKQRRDN-ENVINEFSSELEKHQLYIDETVNSNIPTNLRVLRAILENLRSKIQKLE 709
           +   Q  + +N E+      S +E+   Y  ET+ S   + +R L+ +  +   KI  L 
Sbjct: 92  YNPDQPSKPNNIESATKNSKSMMEEIMKY--ETLISTHESTIRFLQEVYNSNSQKIVNLR 149

Query: 710 SDVLAQMEYCRTPCTVTCNIPVVSGKECEEIIRNGGETSEMYLIQPSDSIEPYRVYCDMK 889
             V+     C+ PC  T  I  V+G++C+++   G + S +Y I+P  + + + VYC++ 
Sbjct: 150 DKVVQLEANCQEPCQDTVKIHDVTGRDCQDVANKGAKESGLYFIRPLKA-KQFLVYCEID 208

Query: 890 TERGGWTVIQNRQDGSVDFGRKWDPYKQG 976
               GWTV Q R DGS+DF + W  YK+G
Sbjct: 209 GSGNGWTVFQKRLDGSLDFKKNWIQYKEG 237



 Score = 46.6 bits (109), Expect(2) = 4e-27
 Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
 Frame = +1

Query: 1033 EYWLGNDKISQLTRMG--PTKLLIEMEDWEGGKVKAIYEGFTVQNEANKYQISLSKY-KG 1203
            E+WLGN+KI  ++     P  L I++EDW G    A Y  F V  E +KY+++ + +  G
Sbjct: 250  EFWLGNEKIHLISTQSSIPYVLRIQLEDWNGRTSTADYASFKVTGENDKYRLTYAYFIGG 309

Query: 1204 TAGNA 1218
             AG+A
Sbjct: 310  DAGDA 314


>ref|NP_001068894.1| angiopoietin-related protein 1 precursor [Bos taurus].
          Length = 491

 Score = 66.2 bits (160), Expect(2) = 8e-24
 Identities = 28/64 (43%), Positives = 42/64 (65%)
 Frame = +2

Query: 785 KECEEIIRNGGETSEMYLIQPSDSIEPYRVYCDMKTERGGWTVIQNRQDGSVDFGRKWDP 964
           K+C+     G   S +Y+I+P +S  P +++C+   + GGWTVIQ R DGSV+F R W+ 
Sbjct: 278 KDCQHAKDAGHSVSGIYMIKPENSNGPMQLWCENSLDPGGWTVIQKRTDGSVNFFRNWEN 337

Query: 965 YKQG 976
           YK+G
Sbjct: 338 YKKG 341



 Score = 63.5 bits (153), Expect(2) = 8e-24
 Identities = 30/72 (41%), Positives = 44/72 (61%)
 Frame = +1

Query: 1009 KKYCGIPGEYWLGNDKISQLTRMGPTKLLIEMEDWEGGKVKAIYEGFTVQNEANKYQISL 1188
            K +  I GEYWLG + I  L+     KLLIE+EDW   KV A Y  F ++ E+  Y++ L
Sbjct: 340  KGFGNIDGEYWLGLENIYLLSNQDNYKLLIELEDWSDKKVYAEYSSFRLEPESEFYRLRL 399

Query: 1189 SKYKGTAGNALL 1224
              Y+G AG++++
Sbjct: 400  GTYQGNAGDSMM 411


>ref|NP_001014909.1| angiopoietin-related protein 7 precursor [Bos taurus].
          Length = 344

 Score = 67.8 bits (164), Expect(3) = 6e-23
 Identities = 33/75 (44%), Positives = 45/75 (60%)
 Frame = +1

Query: 1000 QMGKKYCGIPGEYWLGNDKISQLTRMGPTKLLIEMEDWEGGKVKAIYEGFTVQNEANKYQ 1179
            Q  + +  I G++WLGND I +L+R  PT+L +EM+DWEG    A Y  F + NE N Y+
Sbjct: 188  QYKQGFGSIRGDFWLGNDHIHRLSRR-PTRLRVEMQDWEGNMRYAEYSHFVLGNELNSYR 246

Query: 1180 ISLSKYKGTAGNALL 1224
            + L  Y G  GN  L
Sbjct: 247  LFLGNYSGDVGNDAL 261



 Score = 58.2 bits (139), Expect(3) = 6e-23
 Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
 Frame = +2

Query: 788 ECEEIIRNGGETSEMYLIQPSDSI--EPYRVYCDMKTERGGWTVIQNRQDGSVDFGRKWD 961
           +C  + +     S +Y + P D +      V+CDM+T  GGWT+IQ R+ G V F R W 
Sbjct: 128 DCSSLYQKNYRISGVYKLPPDDFLGSPELEVFCDMETSGGGWTIIQRRKSGLVSFYRDWK 187

Query: 962 PYKQG 976
            YKQG
Sbjct: 188 QYKQG 192



 Score = 20.8 bits (42), Expect(3) = 6e-23
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +2

Query: 1271 HNSMFFSTYNRDNE 1312
            HN+  FST ++DN+
Sbjct: 264  HNNTAFSTKDKDND 277


>ref|NP_001070265.1| angiopoietin-1 precursor [Bos taurus].
          Length = 497

 Score = 66.2 bits (160), Expect(2) = 5e-22
 Identities = 28/64 (43%), Positives = 42/64 (65%)
 Frame = +2

Query: 785 KECEEIIRNGGETSEMYLIQPSDSIEPYRVYCDMKTERGGWTVIQNRQDGSVDFGRKWDP 964
           ++C ++ + G   S +Y I  ++  EP +V+C+M    GGWTVIQ+R+DGS+DF R W  
Sbjct: 283 RDCADVYQAGFNKSGIYTIYINNMPEPKKVFCNMDLNGGGWTVIQHREDGSLDFQRGWKE 342

Query: 965 YKQG 976
           YK G
Sbjct: 343 YKMG 346



 Score = 57.4 bits (137), Expect(2) = 5e-22
 Identities = 29/71 (40%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
 Frame = +1

Query: 1030 GEYWLGNDKISQLTRMGPTKLLIEMEDWEGGKVKAIYEGFTVQNEANKYQISLSKYKGTA 1209
            GEYWLGN+ I  +T      L IE+ DWEG +  + Y+ F + NE   Y++ L  + GTA
Sbjct: 352  GEYWLGNEFIFAITSQRQYTLRIELLDWEGNRAYSQYDRFHIGNEKQNYRLYLKGHTGTA 411

Query: 1210 G---NALLEGA 1233
            G   + +L GA
Sbjct: 412  GKQSSLILHGA 422


>ref|XP_002707737.1| PREDICTED: microfibrillar-associated protein 4-like [Bos taurus].
          Length = 625

 Score = 69.7 bits (169), Expect(3) = 2e-21
 Identities = 27/67 (40%), Positives = 45/67 (67%)
 Frame = +2

Query: 785 KECEEIIRNGGETSEMYLIQPSDSIEPYRVYCDMKTERGGWTVIQNRQDGSVDFGRKWDP 964
           ++C +++ +G +   +Y + P+     ++VYCDM+T+ GGWTV Q R+DGSV+F R W+ 
Sbjct: 242 RDCLDVLLSGQQEDGVYSVFPTHDPAGFQVYCDMRTDGGGWTVFQRREDGSVNFFRGWEA 301

Query: 965 YKQGIWK 985
           Y+ G  K
Sbjct: 302 YRDGFGK 308



 Score = 49.7 bits (117), Expect(3) = 2e-21
 Identities = 25/73 (34%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
 Frame = +1

Query: 1024 IPGEYWLGNDKISQLTRMGPTKLLIEMEDWEGGKVKAIYEG-----FTVQNEANKYQISL 1188
            + GE+WLG  +I  LT     +L +++ED++ G   A Y       F+V  E + Y +++
Sbjct: 309  LTGEHWLGLKRIHALTTQAAYELHVDLEDFDNGTAYAHYGSFGVGLFSVDPEEDGYPLTV 368

Query: 1189 SKYKGTAGNALLE 1227
            + Y GTAG++LL+
Sbjct: 369  ADYSGTAGDSLLK 381



 Score = 22.3 bits (46), Expect(3) = 2e-21
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +2

Query: 1271 HNSMFFSTYNRDNERLENH 1327
            H+ M F+T +RD++  EN+
Sbjct: 382  HSGMKFTTKDRDSDHSENN 400


>ref|NP_001010996.1| ficolin-2 precursor [Bos taurus].
          Length = 329

 Score = 62.8 bits (151), Expect(2) = 3e-21
 Identities = 31/64 (48%), Positives = 37/64 (57%)
 Frame = +2

Query: 785 KECEEIIRNGGETSEMYLIQPSDSIEPYRVYCDMKTERGGWTVIQNRQDGSVDFGRKWDP 964
           + C E++  G   S  + I   D   P  V CDM T+ GGWTV Q R+DGSVDF R W  
Sbjct: 119 RTCTELLTRGHFLSGWHTIYLPDC-RPLTVLCDMDTDGGGWTVFQRRKDGSVDFFRTWTA 177

Query: 965 YKQG 976
           YKQG
Sbjct: 178 YKQG 181



 Score = 58.5 bits (140), Expect(2) = 3e-21
 Identities = 30/84 (35%), Positives = 49/84 (58%), Gaps = 3/84 (3%)
 Frame = +1

Query: 1030 GEYWLGNDKISQLTRMGPTKLLIEMEDWEGGKVKAIYEGFTVQNEANKYQISLSKY-KGT 1206
            GE+WLGND I  LT  G ++L +++ D+EG    A Y+ F + +EA KY++ L  + +G 
Sbjct: 187  GEFWLGNDNIHALTAQGTSELRVDLMDFEGNHRFAKYQSFRMADEAEKYKLVLGAFVEGN 246

Query: 1207 AGNALLEGASQLVG--ENPNHEHP 1272
            AG++L +  +      +  N E P
Sbjct: 247  AGDSLTDHGNHFFSTKDRDNDESP 270


>ref|XP_610224.4| PREDICTED: microfibrillar-associated protein 4-like [Bos taurus].
          Length = 519

 Score = 69.7 bits (169), Expect(2) = 9e-19
 Identities = 27/67 (40%), Positives = 45/67 (67%)
 Frame = +2

Query: 785 KECEEIIRNGGETSEMYLIQPSDSIEPYRVYCDMKTERGGWTVIQNRQDGSVDFGRKWDP 964
           ++C +++ +G +   +Y + P+     ++VYCDM+T+ GGWTV Q R+DGSV+F R W+ 
Sbjct: 242 RDCLDVLLSGQQEDGVYSVFPTHDPAGFQVYCDMRTDGGGWTVFQRREDGSVNFFRGWEA 301

Query: 965 YKQGIWK 985
           Y+ G  K
Sbjct: 302 YRDGFGK 308



 Score = 43.1 bits (100), Expect(2) = 9e-19
 Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 5/67 (7%)
 Frame = +1

Query: 1024 IPGEYWLGNDKISQLTRMGPTKLLIEMEDWEGGKVKAIYEG-----FTVQNEANKYQISL 1188
            + GE+WLG  +I  LT     +L +++ED++ G   A Y       F+V  E + Y +++
Sbjct: 309  LTGEHWLGLKRIHALTTQAAYELHVDLEDFDNGTAYAHYGSFGVGLFSVDPEEDGYPLTV 368

Query: 1189 SKYKGTA 1209
            + Y GTA
Sbjct: 369  ADYSGTA 375


>ref|NP_001192770.1| tenascin-N [Bos taurus].
          Length = 1296

 Score = 57.8 bits (138), Expect(2) = 2e-17
 Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 11/108 (10%)
 Frame = +2

Query: 686  RSKIQKLESDV-----LAQMEYCRTPCTVTCNIPVVSGK-----ECEEIIRNGGETSEMY 835
            R ++Q LE  V     L   +  R   +V+ N+  V  +     +C ++ +N    S +Y
Sbjct: 1022 RFELQGLEQGVTLPVSLVAFKGDRRSRSVSTNLSTVGARFPHPSDCSQVQQNSNAASGLY 1081

Query: 836  LIQ-PSDSIEPYRVYCDMKTERGGWTVIQNRQDGSVDFGRKWDPYKQG 976
             I    D+    +VYCDM T+ GGW V Q R  G +DF ++W  Y +G
Sbjct: 1082 TIYLHGDASRSLQVYCDMDTDGGGWIVFQRRNTGQLDFFKRWRTYVEG 1129



 Score = 50.8 bits (120), Expect(2) = 2e-17
 Identities = 23/64 (35%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
 Frame = +1

Query: 1033 EYWLGNDKISQLTRMGPTKLLIEME-DWEGGKVKAIYEGFTVQNEANKYQISLSKYKGTA 1209
            E+WLG DK+  LT   PT+  + ++         A+Y+ F V +   +Y++++ KY+GTA
Sbjct: 1136 EFWLGLDKLHNLTMGTPTRYEVRVDLQTANESAYAVYDSFQVASSKERYRLTVGKYRGTA 1195

Query: 1210 GNAL 1221
            G+AL
Sbjct: 1196 GDAL 1199


  Database: RefSeq49_BP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 17,681,374
  Number of sequences in database:  33,088
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 51,715,853
Number of extensions: 1368364
Number of successful extensions: 3942
Number of sequences better than 1.0e-05: 25
Number of HSP's gapped: 3929
Number of HSP's successfully gapped: 56
Length of query: 454
Length of database: 17,681,374
Length adjustment: 106
Effective length of query: 348
Effective length of database: 14,174,046
Effective search space: 4932568008
Effective search space used: 4932568008
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

Search to RefSeqCP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-007023
         (1363 letters)

Database: RefSeq49_CP.fasta 
           33,336 sequences; 18,874,504 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_853738.1| PREDICTED: similar to Fibrinogen beta chain pre...   478   e-136
Alignment   gi|XP_532696.2| PREDICTED: similar to Fibrinogen beta chain pre...   473   e-135
Alignment   gi|XP_867836.1| PREDICTED: similar to Fibrinogen beta chain pre...   135   7e-34
Alignment   gi|XP_853752.1| PREDICTED: similar to Fibrinogen gamma chain pr...    94   3e-29
Alignment   gi|XP_532698.2| PREDICTED: similar to fibrinogen, gamma chain i...    94   3e-29
Alignment   gi|XP_867873.1| PREDICTED: similar to fibrinogen, gamma chain i...    94   4e-29
Alignment   gi|XP_533109.2| PREDICTED: similar to Fibroleukin precursor (Fi...    72   1e-26
Alignment   gi|XP_860886.1| PREDICTED: similar to angiopoietin-like 1 precu...    69   2e-24
Alignment   gi|XP_850177.1| PREDICTED: similar to angiopoietin-like 1 precu...    67   9e-24
Alignment   gi|XP_860919.1| PREDICTED: similar to angiopoietin-like 1 precu...    67   9e-24

>ref|XP_853738.1| PREDICTED: similar to Fibrinogen beta chain precursor isoform 2
            [Canis familiaris].
          Length = 488

 Score =  478 bits (1229), Expect(2) = e-136
 Identities = 261/429 (60%), Positives = 292/429 (68%), Gaps = 11/429 (2%)
 Frame = +2

Query: 59   MVSWDFQKLKIMKPXXXXXXCVFIIKAQAAIDYDEDEDGRPKVHVDARGHRPYDKRREEA 238
            MVSW+F+  K MK       CVFI+K+QA   YD+         VDARGHRP DK+REEA
Sbjct: 1    MVSWNFKNFKSMKNLLLLLLCVFIVKSQAHY-YDDTST------VDARGHRPLDKKREEA 53

Query: 239  PSLRPVAPPISAGGYQPRPAKVAIGQKKVERKPPDAGGCLHADPDLGVLCPTGCQLQDTL 418
            PSLRP  PPIS GGY+ RP K    QKK+ERK PDAGGCLHADPDLGVLCPTGCQLQDTL
Sbjct: 54   PSLRPAPPPISGGGYRARPVKPVASQKKLERKAPDAGGCLHADPDLGVLCPTGCQLQDTL 113

Query: 419  LKQERPIKTSIEELNXXXXXXXXXXXXTFQYMTLLKRLWKDRQKQRRDNENVINEFSSEL 598
            +KQERPI+ SI+ELN            TFQY+TLLK +WK+RQKQ RDNEN INE+SSEL
Sbjct: 114  VKQERPIRKSIDELNNNVESVSQSSSSTFQYITLLKDMWKNRQKQIRDNENAINEYSSEL 173

Query: 599  EKHQLYIDETVNSNIPTNLRVLRAILENLRSKIQKLESDVLAQMEYCRTPCTVTCNIPVV 778
            EKHQLYI+ETV SNIPTNLRVLRAILENLRSKIQKLESDV AQMEYCRTPCTV+CNIPVV
Sbjct: 174  EKHQLYIEETVTSNIPTNLRVLRAILENLRSKIQKLESDVSAQMEYCRTPCTVSCNIPVV 233

Query: 779  SGKECEEIIRNGGETSEMYLIQPSDSIEPYRVYCDMKTERGGWTVIQNRQDGSVDFGRKW 958
            SGKECEEIIRNGGETSEMYLIQP  SI PYRVYCDM T+ GGWTVIQNRQDGSVDFGR W
Sbjct: 234  SGKECEEIIRNGGETSEMYLIQPHSSITPYRVYCDMTTDSGGWTVIQNRQDGSVDFGRTW 293

Query: 959  DPYKQGIW---------KYCNQC--KWEKNIVAYQVSIGLEMIKLASLPGWDPQSF*SKW 1105
            DPYKQG           KYC      W  N    Q++       L  +  W       K 
Sbjct: 294  DPYKQGFGNIATSADGKKYCGLPGEYWLGNDKISQLTNMGPTELLIEMEDWKGDKV--KA 351

Query: 1106 RTGKEAR*RQSTKDSLCRTKPINTRSR*ANTREQLATPSWKEPLNWWEKTRTMNIHNSMF 1285
              G      ++ K  L  +K   T     N   + A+  + E        +TM IHN M+
Sbjct: 352  LYGGFTMQNEANKYQLSVSKYKGTA---GNALIEGASQLFGE-------NQTMTIHNGMY 401

Query: 1286 FSTYNRDNE 1312
            FSTY+RDN+
Sbjct: 402  FSTYDRDND 410



 Score = 27.7 bits (60), Expect(2) = e-136
 Identities = 9/13 (69%), Positives = 12/13 (92%)
 Frame = +3

Query: 1311 NGWKTTDPRKQCS 1349
            +GW TTDP+KQC+
Sbjct: 410  DGWITTDPKKQCA 422


>ref|XP_532696.2| PREDICTED: similar to Fibrinogen beta chain precursor isoform 1
            [Canis familiaris].
          Length = 484

 Score =  473 bits (1216), Expect(2) = e-135
 Identities = 257/418 (61%), Positives = 286/418 (68%), Gaps = 11/418 (2%)
 Frame = +2

Query: 92   MKPXXXXXXCVFIIKAQAAIDYDEDEDGRPKVHVDARGHRPYDKRREEAPSLRPVAPPIS 271
            MK       CVFI+K+QA    D DE+ R    VDARGHRP DK+REEAPSLRP  PPIS
Sbjct: 1    MKNLLLLLLCVFIVKSQAHYYDDTDEEERIVSTVDARGHRPLDKKREEAPSLRPAPPPIS 60

Query: 272  AGGYQPRPAKVAIGQKKVERKPPDAGGCLHADPDLGVLCPTGCQLQDTLLKQERPIKTSI 451
             GGY+ RP K    QKK+ERK PDAGGCLHADPDLGVLCPTGCQLQDTL+KQERPI+ SI
Sbjct: 61   GGGYRARPVKPVASQKKLERKAPDAGGCLHADPDLGVLCPTGCQLQDTLVKQERPIRKSI 120

Query: 452  EELNXXXXXXXXXXXXTFQYMTLLKRLWKDRQKQRRDNENVINEFSSELEKHQLYIDETV 631
            +ELN            TFQY+TLLK +WK+RQKQ RDNEN INE+SSELEKHQLYI+ETV
Sbjct: 121  DELNNNVESVSQSSSSTFQYITLLKDMWKNRQKQIRDNENAINEYSSELEKHQLYIEETV 180

Query: 632  NSNIPTNLRVLRAILENLRSKIQKLESDVLAQMEYCRTPCTVTCNIPVVSGKECEEIIRN 811
             SNIPTNLRVLRAILENLRSKIQKLESDV AQMEYCRTPCTV+CNIPVVSGKECEEIIRN
Sbjct: 181  TSNIPTNLRVLRAILENLRSKIQKLESDVSAQMEYCRTPCTVSCNIPVVSGKECEEIIRN 240

Query: 812  GGETSEMYLIQPSDSIEPYRVYCDMKTERGGWTVIQNRQDGSVDFGRKWDPYKQGIW--- 982
            GGETSEMYLIQP  SI PYRVYCDM T+ GGWTVIQNRQDGSVDFGR WDPYKQG     
Sbjct: 241  GGETSEMYLIQPHSSITPYRVYCDMTTDSGGWTVIQNRQDGSVDFGRTWDPYKQGFGNIA 300

Query: 983  ------KYCNQC--KWEKNIVAYQVSIGLEMIKLASLPGWDPQSF*SKWRTGKEAR*RQS 1138
                  KYC      W  N    Q++       L  +  W       K   G      ++
Sbjct: 301  TSADGKKYCGLPGEYWLGNDKISQLTNMGPTELLIEMEDWKGDKV--KALYGGFTMQNEA 358

Query: 1139 TKDSLCRTKPINTRSR*ANTREQLATPSWKEPLNWWEKTRTMNIHNSMFFSTYNRDNE 1312
             K  L  +K   T     N   + A+  + E        +TM IHN M+FSTY+RDN+
Sbjct: 359  NKYQLSVSKYKGTA---GNALIEGASQLFGE-------NQTMTIHNGMYFSTYDRDND 406



 Score = 27.7 bits (60), Expect(2) = e-135
 Identities = 9/13 (69%), Positives = 12/13 (92%)
 Frame = +3

Query: 1311 NGWKTTDPRKQCS 1349
            +GW TTDP+KQC+
Sbjct: 406  DGWITTDPKKQCA 418


>ref|XP_867836.1| PREDICTED: similar to Fibrinogen beta chain precursor isoform 3
            [Canis familiaris].
          Length = 227

 Score =  135 bits (341), Expect(2) = 7e-34
 Identities = 63/74 (85%), Positives = 70/74 (94%)
 Frame = +1

Query: 1033 EYWLGNDKISQLTRMGPTKLLIEMEDWEGGKVKAIYEGFTVQNEANKYQISLSKYKGTAG 1212
            EYWLGNDKISQLT MGPT+LLIEMEDW+G KVKA+Y GFT+QNEANKYQ+S+SKYKGTAG
Sbjct: 57   EYWLGNDKISQLTNMGPTELLIEMEDWKGDKVKALYGGFTMQNEANKYQLSVSKYKGTAG 116

Query: 1213 NALLEGASQLVGEN 1254
            NAL+EGASQL GEN
Sbjct: 117  NALIEGASQLFGEN 130



 Score = 27.7 bits (60), Expect(2) = 7e-34
 Identities = 9/13 (69%), Positives = 12/13 (92%)
 Frame = +3

Query: 1311 NGWKTTDPRKQCS 1349
            +GW TTDP+KQC+
Sbjct: 149  DGWITTDPKKQCA 161



 Score =  110 bits (276), Expect = 2e-24
 Identities = 69/161 (42%), Positives = 83/161 (51%)
 Frame = +2

Query: 830  MYLIQPSDSIEPYRVYCDMKTERGGWTVIQNRQDGSVDFGRKWDPYKQGIWKYCNQCKWE 1009
            MYLIQP  SI PYRVYCDM T+ GGWTVIQNRQDGSVDFGR WDPYKQG         W 
Sbjct: 1    MYLIQPHSSITPYRVYCDMTTDSGGWTVIQNRQDGSVDFGRTWDPYKQGFGNIATSEYWL 60

Query: 1010 KNIVAYQVSIGLEMIKLASLPGWDPQSF*SKWRTGKEAR*RQSTKDSLCRTKPINTRSR* 1189
             N    Q++       L  +  W       K   G      ++ K  L  +K   T    
Sbjct: 61   GNDKISQLTNMGPTELLIEMEDWKGDKV--KALYGGFTMQNEANKYQLSVSKYKGTA--- 115

Query: 1190 ANTREQLATPSWKEPLNWWEKTRTMNIHNSMFFSTYNRDNE 1312
             N   + A+  + E        +TM IHN M+FSTY+RDN+
Sbjct: 116  GNALIEGASQLFGE-------NQTMTIHNGMYFSTYDRDND 149


>ref|XP_853752.1| PREDICTED: similar to Fibrinogen gamma chain precursor isoform 2
           [Canis familiaris].
          Length = 445

 Score = 94.0 bits (232), Expect(3) = 3e-29
 Identities = 53/208 (25%), Positives = 95/208 (45%)
 Frame = +2

Query: 353 CLHADPDLGVLCPTGCQLQDTLLKQERPIKTSIEELNXXXXXXXXXXXXTFQYMTLLKRL 532
           C   D   G  CPT C + D L   +  +   ++ L               + +  ++  
Sbjct: 34  CCILDERFGSYCPTTCGIADFLSTYQTGVDNDLQALEDLLRRIENKTAEAKEVIKSIQIT 93

Query: 533 WKDRQKQRRDNENVINEFSSELEKHQLYIDETVNSNIPTNLRVLRAILENLRSKIQKLES 712
           +   +  + +      + S ++ +  +  +  V S+  +N+R L  I  +   KI  L+ 
Sbjct: 94  YNPDEPPKPNRVVGATKDSKKMMEEIIKYEALVGSH-ESNIRFLLEIYNSNSQKINNLKQ 152

Query: 713 DVLAQMEYCRTPCTVTCNIPVVSGKECEEIIRNGGETSEMYLIQPSDSIEPYRVYCDMKT 892
            V      C+ PC  T +I   +GK+C++I   G + S +Y I+P  + + + VYC++  
Sbjct: 153 KVAQLEAKCQEPCKDTVHIHDTTGKDCQDIANKGAKESGLYFIKPLKAKQQFLVYCEIDG 212

Query: 893 ERGGWTVIQNRQDGSVDFGRKWDPYKQG 976
              GWTV+Q R DGS+DF + W  YK+G
Sbjct: 213 SGNGWTVLQKRLDGSLDFKKNWIQYKEG 240



 Score = 48.1 bits (113), Expect(3) = 3e-29
 Identities = 27/65 (41%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
 Frame = +1

Query: 1033 EYWLGNDKISQLTRMG--PTKLLIEMEDWEGGKVKAIYEGFTVQNEANKYQISLSKY-KG 1203
            E+WLGN+KI  ++     P  L I++EDW G    A Y  F V  EA+KY+++ + Y  G
Sbjct: 251  EFWLGNEKIHLISTQSAIPYALRIQLEDWNGRTSTADYAMFKVGPEADKYRMTYAYYIGG 310

Query: 1204 TAGNA 1218
             AG+A
Sbjct: 311  DAGDA 315



 Score = 26.2 bits (56), Expect(3) = 3e-29
 Identities = 9/23 (39%), Positives = 17/23 (73%)
 Frame = +2

Query: 1271 HNSMFFSTYNRDNERLENHRSQK 1339
            HN M FST++ DN++ E + +++
Sbjct: 333  HNGMQFSTWDNDNDKYEGNCAEQ 355


>ref|XP_532698.2| PREDICTED: similar to fibrinogen, gamma chain isoform gamma-A
           precursor isoform 1 [Canis familiaris].
          Length = 437

 Score = 94.0 bits (232), Expect(3) = 3e-29
 Identities = 53/208 (25%), Positives = 95/208 (45%)
 Frame = +2

Query: 353 CLHADPDLGVLCPTGCQLQDTLLKQERPIKTSIEELNXXXXXXXXXXXXTFQYMTLLKRL 532
           C   D   G  CPT C + D L   +  +   ++ L               + +  ++  
Sbjct: 34  CCILDERFGSYCPTTCGIADFLSTYQTGVDNDLQALEDLLRRIENKTAEAKEVIKSIQIT 93

Query: 533 WKDRQKQRRDNENVINEFSSELEKHQLYIDETVNSNIPTNLRVLRAILENLRSKIQKLES 712
           +   +  + +      + S ++ +  +  +  V S+  +N+R L  I  +   KI  L+ 
Sbjct: 94  YNPDEPPKPNRVVGATKDSKKMMEEIIKYEALVGSH-ESNIRFLLEIYNSNSQKINNLKQ 152

Query: 713 DVLAQMEYCRTPCTVTCNIPVVSGKECEEIIRNGGETSEMYLIQPSDSIEPYRVYCDMKT 892
            V      C+ PC  T +I   +GK+C++I   G + S +Y I+P  + + + VYC++  
Sbjct: 153 KVAQLEAKCQEPCKDTVHIHDTTGKDCQDIANKGAKESGLYFIKPLKAKQQFLVYCEIDG 212

Query: 893 ERGGWTVIQNRQDGSVDFGRKWDPYKQG 976
              GWTV+Q R DGS+DF + W  YK+G
Sbjct: 213 SGNGWTVLQKRLDGSLDFKKNWIQYKEG 240



 Score = 48.1 bits (113), Expect(3) = 3e-29
 Identities = 27/65 (41%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
 Frame = +1

Query: 1033 EYWLGNDKISQLTRMG--PTKLLIEMEDWEGGKVKAIYEGFTVQNEANKYQISLSKY-KG 1203
            E+WLGN+KI  ++     P  L I++EDW G    A Y  F V  EA+KY+++ + Y  G
Sbjct: 251  EFWLGNEKIHLISTQSAIPYALRIQLEDWNGRTSTADYAMFKVGPEADKYRMTYAYYIGG 310

Query: 1204 TAGNA 1218
             AG+A
Sbjct: 311  DAGDA 315



 Score = 26.2 bits (56), Expect(3) = 3e-29
 Identities = 9/23 (39%), Positives = 17/23 (73%)
 Frame = +2

Query: 1271 HNSMFFSTYNRDNERLENHRSQK 1339
            HN M FST++ DN++ E + +++
Sbjct: 333  HNGMQFSTWDNDNDKYEGNCAEQ 355


>ref|XP_867873.1| PREDICTED: similar to fibrinogen, gamma chain isoform gamma-A
           precursor isoform 4 [Canis familiaris].
          Length = 444

 Score = 93.6 bits (231), Expect(3) = 4e-29
 Identities = 56/214 (26%), Positives = 95/214 (44%), Gaps = 6/214 (2%)
 Frame = +2

Query: 353 CLHADPDLGVLCPTGCQLQDTLLKQERPIKTSIEELNXXXXXXXXXXXXTFQYMTLLKRL 532
           C   D   G  CPT C + D L   +  +   ++ L               + +  ++  
Sbjct: 34  CCILDERFGSYCPTTCGIADFLSTYQTGVDNDLQALEDLLRRIENKTAEAKEVIKSIQIT 93

Query: 533 W------KDRQKQRRDNENVINEFSSELEKHQLYIDETVNSNIPTNLRVLRAILENLRSK 694
           +      K  +KQ   +  V     S+    ++   E +  +  +N+R L  I  +   K
Sbjct: 94  YNPDEPPKPSEKQNTADRVVGATKDSKKMMEEIIKYEALVGSHESNIRFLLEIYNSNSQK 153

Query: 695 IQKLESDVLAQMEYCRTPCTVTCNIPVVSGKECEEIIRNGGETSEMYLIQPSDSIEPYRV 874
           I  L+  V      C+ PC  T +I   +GK+C++I   G + S +Y I+P  + + + V
Sbjct: 154 INNLKQKVAQLEAKCQEPCKDTVHIHDTTGKDCQDIANKGAKESGLYFIKPLKAKQQFLV 213

Query: 875 YCDMKTERGGWTVIQNRQDGSVDFGRKWDPYKQG 976
           YC++     GWTV+Q R DGS+DF + W  YK+G
Sbjct: 214 YCEIDGSGNGWTVLQKRLDGSLDFKKNWIQYKEG 247



 Score = 48.1 bits (113), Expect(3) = 4e-29
 Identities = 27/65 (41%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
 Frame = +1

Query: 1033 EYWLGNDKISQLTRMG--PTKLLIEMEDWEGGKVKAIYEGFTVQNEANKYQISLSKY-KG 1203
            E+WLGN+KI  ++     P  L I++EDW G    A Y  F V  EA+KY+++ + Y  G
Sbjct: 258  EFWLGNEKIHLISTQSAIPYALRIQLEDWNGRTSTADYAMFKVGPEADKYRMTYAYYIGG 317

Query: 1204 TAGNA 1218
             AG+A
Sbjct: 318  DAGDA 322



 Score = 26.2 bits (56), Expect(3) = 4e-29
 Identities = 9/23 (39%), Positives = 17/23 (73%)
 Frame = +2

Query: 1271 HNSMFFSTYNRDNERLENHRSQK 1339
            HN M FST++ DN++ E + +++
Sbjct: 340  HNGMQFSTWDNDNDKYEGNCAEQ 362


>ref|XP_533109.2| PREDICTED: similar to Fibroleukin precursor (Fibrinogen-like
           protein 2) (pT49) [Canis familiaris].
          Length = 441

 Score = 72.0 bits (175), Expect(3) = 1e-26
 Identities = 45/145 (31%), Positives = 71/145 (48%), Gaps = 5/145 (3%)
 Frame = +2

Query: 557 RDNENVINEFSSELEKHQLYIDETVNSNIPTNLRVLRAILENLRSKIQKLESDVLAQMEY 736
           R+ E+ +N+ S++L+  +  ID         +L  +  I   + SK+  L S V +    
Sbjct: 132 RELESEVNKLSADLKDAKEEIDVLHGRLEELSLVNMNNIENYVDSKVANLTSVVNSLDGK 191

Query: 737 CRTPC-----TVTCNIPVVSGKECEEIIRNGGETSEMYLIQPSDSIEPYRVYCDMKTERG 901
           C + C     T +  +  +  K+C +    G  +SE Y + P      + V+CDM+T  G
Sbjct: 192 CSSKCPSQEHTQSRPVQHLIYKDCSDYYTIGKRSSETYRVTPDPKNSSFEVFCDMETMGG 251

Query: 902 GWTVIQNRQDGSVDFGRKWDPYKQG 976
           GWTV+Q R DGS +F R W  YK G
Sbjct: 252 GWTVLQARLDGSTNFTRTWQDYKVG 276



 Score = 65.5 bits (158), Expect(3) = 1e-26
 Identities = 31/63 (49%), Positives = 43/63 (68%)
 Frame = +1

Query: 1033 EYWLGNDKISQLTRMGPTKLLIEMEDWEGGKVKAIYEGFTVQNEANKYQISLSKYKGTAG 1212
            E+WLGNDKI  LT+     L I++ED+ G K+ A+Y+ F V NE  KY++ +  Y GTAG
Sbjct: 283  EFWLGNDKIHLLTKSKDMILRIDLEDFNGVKLYALYDQFYVANEFLKYRLHIGNYNGTAG 342

Query: 1213 NAL 1221
            +AL
Sbjct: 343  DAL 345



 Score = 22.3 bits (46), Expect(3) = 1e-26
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +2

Query: 1271 HNSMFFSTYNRDNER 1315
            H+  FF+T +RDN+R
Sbjct: 353  HDLKFFTTPDRDNDR 367


>ref|XP_860886.1| PREDICTED: similar to angiopoietin-like 1 precursor isoform 3
           [Canis familiaris].
          Length = 494

 Score = 69.3 bits (168), Expect(2) = 2e-24
 Identities = 30/71 (42%), Positives = 45/71 (63%)
 Frame = +2

Query: 764 NIPVVSGKECEEIIRNGGETSEMYLIQPSDSIEPYRVYCDMKTERGGWTVIQNRQDGSVD 943
           N+P    K+C+     G   S +Y+I+P +S  P +++C+   + GGWTVIQ R DGSV+
Sbjct: 274 NVPDRPFKDCQHAKEAGHSVSGIYMIKPENSNGPIQLWCENSLDPGGWTVIQKRTDGSVN 333

Query: 944 FGRKWDPYKQG 976
           F R W+ YK+G
Sbjct: 334 FFRNWENYKKG 344



 Score = 62.8 bits (151), Expect(2) = 2e-24
 Identities = 29/72 (40%), Positives = 44/72 (61%)
 Frame = +1

Query: 1009 KKYCGIPGEYWLGNDKISQLTRMGPTKLLIEMEDWEGGKVKAIYEGFTVQNEANKYQISL 1188
            K +  I GEYWLG + I  L+     KLLIE+EDW   KV A Y  F ++ E+  +++ L
Sbjct: 343  KGFGNIDGEYWLGLENIYMLSNQDNYKLLIELEDWSDKKVYAEYSSFRLEPESEFFRLRL 402

Query: 1189 SKYKGTAGNALL 1224
              Y+G AG++++
Sbjct: 403  GTYQGNAGDSMM 414


>ref|XP_850177.1| PREDICTED: similar to angiopoietin-like 1 precursor isoform 2
           [Canis familiaris].
          Length = 502

 Score = 67.0 bits (162), Expect(2) = 9e-24
 Identities = 28/64 (43%), Positives = 42/64 (65%)
 Frame = +2

Query: 785 KECEEIIRNGGETSEMYLIQPSDSIEPYRVYCDMKTERGGWTVIQNRQDGSVDFGRKWDP 964
           K+C+     G   S +Y+I+P +S  P +++C+   + GGWTVIQ R DGSV+F R W+ 
Sbjct: 289 KDCQHAKEAGHSVSGIYMIKPENSNGPIQLWCENSLDPGGWTVIQKRTDGSVNFFRNWEN 348

Query: 965 YKQG 976
           YK+G
Sbjct: 349 YKKG 352



 Score = 62.8 bits (151), Expect(2) = 9e-24
 Identities = 29/72 (40%), Positives = 44/72 (61%)
 Frame = +1

Query: 1009 KKYCGIPGEYWLGNDKISQLTRMGPTKLLIEMEDWEGGKVKAIYEGFTVQNEANKYQISL 1188
            K +  I GEYWLG + I  L+     KLLIE+EDW   KV A Y  F ++ E+  +++ L
Sbjct: 351  KGFGNIDGEYWLGLENIYMLSNQDNYKLLIELEDWSDKKVYAEYSSFRLEPESEFFRLRL 410

Query: 1189 SKYKGTAGNALL 1224
              Y+G AG++++
Sbjct: 411  GTYQGNAGDSMM 422


>ref|XP_860919.1| PREDICTED: similar to angiopoietin-like 1 precursor isoform 4
           [Canis familiaris].
          Length = 495

 Score = 67.0 bits (162), Expect(2) = 9e-24
 Identities = 28/64 (43%), Positives = 42/64 (65%)
 Frame = +2

Query: 785 KECEEIIRNGGETSEMYLIQPSDSIEPYRVYCDMKTERGGWTVIQNRQDGSVDFGRKWDP 964
           K+C+     G   S +Y+I+P +S  P +++C+   + GGWTVIQ R DGSV+F R W+ 
Sbjct: 282 KDCQHAKEAGHSVSGIYMIKPENSNGPIQLWCENSLDPGGWTVIQKRTDGSVNFFRNWEN 341

Query: 965 YKQG 976
           YK+G
Sbjct: 342 YKKG 345



 Score = 62.8 bits (151), Expect(2) = 9e-24
 Identities = 29/72 (40%), Positives = 44/72 (61%)
 Frame = +1

Query: 1009 KKYCGIPGEYWLGNDKISQLTRMGPTKLLIEMEDWEGGKVKAIYEGFTVQNEANKYQISL 1188
            K +  I GEYWLG + I  L+     KLLIE+EDW   KV A Y  F ++ E+  +++ L
Sbjct: 344  KGFGNIDGEYWLGLENIYMLSNQDNYKLLIELEDWSDKKVYAEYSSFRLEPESEFFRLRL 403

Query: 1189 SKYKGTAGNALL 1224
              Y+G AG++++
Sbjct: 404  GTYQGNAGDSMM 415


  Database: RefSeq49_CP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,874,504
  Number of sequences in database:  33,336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 54,116,162
Number of extensions: 1415874
Number of successful extensions: 4198
Number of sequences better than 1.0e-05: 34
Number of HSP's gapped: 4178
Number of HSP's successfully gapped: 85
Length of query: 454
Length of database: 18,874,504
Length adjustment: 106
Effective length of query: 348
Effective length of database: 15,340,888
Effective search space: 5338629024
Effective search space used: 5338629024
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

Search to RefSeqHP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-007023
         (1363 letters)

Database: RefSeq49_HP.fasta 
           32,964 sequences; 18,297,164 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_005132.2| fibrinogen beta chain isoform 1 preproprotein [...   483   e-138
Alignment   gi|NP_001171670.1| fibrinogen beta chain isoform 2 preproprotei...   330   3e-92
Alignment   gi|NP_068656.2| fibrinogen gamma chain isoform gamma-B precurso...    95   8e-28
Alignment   gi|NP_000500.2| fibrinogen gamma chain isoform gamma-A precurso...    95   8e-28
Alignment   gi|NP_001112359.1| angiopoietin-2 isoform b precursor [Homo sap...    78   2e-26
Alignment   gi|NP_001138.1| angiopoietin-2 isoform a precursor [Homo sapien...    76   7e-26
Alignment   gi|NP_001112360.1| angiopoietin-2 isoform c precursor [Homo sap...    76   7e-26
Alignment   gi|NP_006673.1| fibroleukin precursor [Homo sapiens].                 70   4e-25
Alignment   gi|NP_004664.1| angiopoietin-related protein 1 precursor [Homo ...    68   2e-24
Alignment   gi|NP_066969.1| angiopoietin-related protein 7 precursor [Homo ...    68   5e-24

>ref|NP_005132.2| fibrinogen beta chain isoform 1 preproprotein [Homo sapiens].
          Length = 491

 Score =  483 bits (1244), Expect(2) = e-138
 Identities = 252/420 (60%), Positives = 284/420 (67%)
 Frame = +2

Query: 53   QRMVSWDFQKLKIMKPXXXXXXCVFIIKAQAAIDYDEDEDGRPKVHVDARGHRPYDKRRE 232
            +RMVSW F KLK MK       CVF++K+Q   D +E           ARGHRP DK+RE
Sbjct: 2    KRMVSWSFHKLKTMKHLLLLLLCVFLVKSQGVNDNEEG-------FFSARGHRPLDKKRE 54

Query: 233  EAPSLRPVAPPISAGGYQPRPAKVAIGQKKVERKPPDAGGCLHADPDLGVLCPTGCQLQD 412
            EAPSLRP  PPIS GGY+ RPAK A  QKKVERK PDAGGCLHADPDLGVLCPTGCQLQ+
Sbjct: 55   EAPSLRPAPPPISGGGYRARPAKAAATQKKVERKAPDAGGCLHADPDLGVLCPTGCQLQE 114

Query: 413  TLLKQERPIKTSIEELNXXXXXXXXXXXXTFQYMTLLKRLWKDRQKQRRDNENVINEFSS 592
             LL+QERPI+ S++ELN            +FQYM LLK LW+ RQKQ +DNENV+NE+SS
Sbjct: 115  ALLQQERPIRNSVDELNNNVEAVSQTSSSSFQYMYLLKDLWQKRQKQVKDNENVVNEYSS 174

Query: 593  ELEKHQLYIDETVNSNIPTNLRVLRAILENLRSKIQKLESDVLAQMEYCRTPCTVTCNIP 772
            ELEKHQLYIDETVNSNIPTNLRVLR+ILENLRSKIQKLESDV AQMEYCRTPCTV+CNIP
Sbjct: 175  ELEKHQLYIDETVNSNIPTNLRVLRSILENLRSKIQKLESDVSAQMEYCRTPCTVSCNIP 234

Query: 773  VVSGKECEEIIRNGGETSEMYLIQPSDSIEPYRVYCDMKTERGGWTVIQNRQDGSVDFGR 952
            VVSGKECEEIIR GGETSEMYLIQP  S++PYRVYCDM TE GGWTVIQNRQDGSVDFGR
Sbjct: 235  VVSGKECEEIIRKGGETSEMYLIQPDSSVKPYRVYCDMNTENGGWTVIQNRQDGSVDFGR 294

Query: 953  KWDPYKQGIWKYCNQCKWEKNIVAYQVSIGLEMIKLASLPGWDPQSF*SKWRTGKEAR*R 1132
            KWDPYKQG           KN         L   K++ L    P     +    K  + +
Sbjct: 295  KWDPYKQGFGNVATNTD-GKNYCGLPGEYWLGNDKISQLTRMGPTELLIEMEDWKGDKVK 353

Query: 1133 QSTKDSLCRTKPINTRSR*ANTREQLATPSWKEPLNWWEKTRTMNIHNSMFFSTYNRDNE 1312
                    + +    +      R                + RTM IHN MFFSTY+RDN+
Sbjct: 354  AHYGGFTVQNEANKYQISVNKYRGTAGNALMDGASQLMGENRTMTIHNGMFFSTYDRDND 413



 Score = 28.9 bits (63), Expect(2) = e-138
 Identities = 10/13 (76%), Positives = 12/13 (92%)
 Frame = +3

Query: 1311 NGWKTTDPRKQCS 1349
            +GW T+DPRKQCS
Sbjct: 413  DGWLTSDPRKQCS 425


>ref|NP_001171670.1| fibrinogen beta chain isoform 2 preproprotein [Homo sapiens].
          Length = 432

 Score =  330 bits (845), Expect(2) = 3e-92
 Identities = 175/308 (56%), Positives = 202/308 (65%)
 Frame = +2

Query: 389  PTGCQLQDTLLKQERPIKTSIEELNXXXXXXXXXXXXTFQYMTLLKRLWKDRQKQRRDNE 568
            P   + ++ LL+QERPI+ S++ELN            +FQYM LLK LW+ RQKQ +DNE
Sbjct: 48   PLDKKREEALLQQERPIRNSVDELNNNVEAVSQTSSSSFQYMYLLKDLWQKRQKQVKDNE 107

Query: 569  NVINEFSSELEKHQLYIDETVNSNIPTNLRVLRAILENLRSKIQKLESDVLAQMEYCRTP 748
            NV+NE+SSELEKHQLYIDETVNSNIPTNLRVLR+ILENLRSKIQKLESDV AQMEYCRTP
Sbjct: 108  NVVNEYSSELEKHQLYIDETVNSNIPTNLRVLRSILENLRSKIQKLESDVSAQMEYCRTP 167

Query: 749  CTVTCNIPVVSGKECEEIIRNGGETSEMYLIQPSDSIEPYRVYCDMKTERGGWTVIQNRQ 928
            CTV+CNIPVVSGKECEEIIR GGETSEMYLIQP  S++PYRVYCDM TE GGWTVIQNRQ
Sbjct: 168  CTVSCNIPVVSGKECEEIIRKGGETSEMYLIQPDSSVKPYRVYCDMNTENGGWTVIQNRQ 227

Query: 929  DGSVDFGRKWDPYKQGIWKYCNQCKWEKNIVAYQVSIGLEMIKLASLPGWDPQSF*SKWR 1108
            DGSVDFGRKWDPYKQG           KN         L   K++ L    P     +  
Sbjct: 228  DGSVDFGRKWDPYKQGFGNVATNTD-GKNYCGLPGEYWLGNDKISQLTRMGPTELLIEME 286

Query: 1109 TGKEAR*RQSTKDSLCRTKPINTRSR*ANTREQLATPSWKEPLNWWEKTRTMNIHNSMFF 1288
              K  + +        + +    +      R                + RTM IHN MFF
Sbjct: 287  DWKGDKVKAHYGGFTVQNEANKYQISVNKYRGTAGNALMDGASQLMGENRTMTIHNGMFF 346

Query: 1289 STYNRDNE 1312
            STY+RDN+
Sbjct: 347  STYDRDND 354



 Score = 28.9 bits (63), Expect(2) = 3e-92
 Identities = 10/13 (76%), Positives = 12/13 (92%)
 Frame = +3

Query: 1311 NGWKTTDPRKQCS 1349
            +GW T+DPRKQCS
Sbjct: 354  DGWLTSDPRKQCS 366



 Score = 58.2 bits (139), Expect = 2e-08
 Identities = 30/62 (48%), Positives = 36/62 (58%)
 Frame = +2

Query: 53  QRMVSWDFQKLKIMKPXXXXXXCVFIIKAQAAIDYDEDEDGRPKVHVDARGHRPYDKRRE 232
           +RMVSW F KLK MK       CVF++K+Q   D +E           ARGHRP DK+RE
Sbjct: 2   KRMVSWSFHKLKTMKHLLLLLLCVFLVKSQGVNDNEEG-------FFSARGHRPLDKKRE 54

Query: 233 EA 238
           EA
Sbjct: 55  EA 56


>ref|NP_068656.2| fibrinogen gamma chain isoform gamma-B precursor [Homo sapiens].
          Length = 453

 Score = 95.1 bits (235), Expect(2) = 8e-28
 Identities = 57/210 (27%), Positives = 93/210 (44%), Gaps = 2/210 (0%)
 Frame = +2

Query: 353 CLHADPDLGVLCPTGCQLQDTLLKQERPIKTSIEELNXXXXXXXXXXXXTFQYMTLLKRL 532
           C   D   G  CPT C + D L   +  +   ++ L             T +   L+K +
Sbjct: 34  CCILDERFGSYCPTTCGIADFLSTYQTKVDKDLQSLEDILHQVENK---TSEVKQLIKAI 90

Query: 533 WKDRQKQRRDNENVINEFSSELEK--HQLYIDETVNSNIPTNLRVLRAILENLRSKIQKL 706
                       N+I+  + +  K   ++   E       +++R L+ I  +   KI  L
Sbjct: 91  QLTYNPDESSKPNMIDAATLKSRKMLEEIMKYEASILTHDSSIRYLQEIYNSNNQKIVNL 150

Query: 707 ESDVLAQMEYCRTPCTVTCNIPVVSGKECEEIIRNGGETSEMYLIQPSDSIEPYRVYCDM 886
           +  V      C+ PC  T  I  ++GK+C++I   G + S +Y I+P  + + + VYC++
Sbjct: 151 KEKVAQLEAQCQEPCKDTVQIHDITGKDCQDIANKGAKQSGLYFIKPLKANQQFLVYCEI 210

Query: 887 KTERGGWTVIQNRQDGSVDFGRKWDPYKQG 976
                GWTV Q R DGSVDF + W  YK+G
Sbjct: 211 DGSGNGWTVFQKRLDGSVDFKKNWIQYKEG 240



 Score = 48.1 bits (113), Expect(2) = 8e-28
 Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
 Frame = +1

Query: 1033 EYWLGNDKISQLTRMG--PTKLLIEMEDWEGGKVKAIYEGFTVQNEANKYQISLSKYK-G 1203
            E+WLGN+KI  ++     P  L +E+EDW G    A Y  F V  EA+KY+++ + +  G
Sbjct: 251  EFWLGNEKIHLISTQSAIPYALRVELEDWNGRTSTADYAMFKVGPEADKYRLTYAYFAGG 310

Query: 1204 TAGNA 1218
             AG+A
Sbjct: 311  DAGDA 315


>ref|NP_000500.2| fibrinogen gamma chain isoform gamma-A precursor [Homo sapiens].
          Length = 437

 Score = 95.1 bits (235), Expect(2) = 8e-28
 Identities = 57/210 (27%), Positives = 93/210 (44%), Gaps = 2/210 (0%)
 Frame = +2

Query: 353 CLHADPDLGVLCPTGCQLQDTLLKQERPIKTSIEELNXXXXXXXXXXXXTFQYMTLLKRL 532
           C   D   G  CPT C + D L   +  +   ++ L             T +   L+K +
Sbjct: 34  CCILDERFGSYCPTTCGIADFLSTYQTKVDKDLQSLEDILHQVENK---TSEVKQLIKAI 90

Query: 533 WKDRQKQRRDNENVINEFSSELEK--HQLYIDETVNSNIPTNLRVLRAILENLRSKIQKL 706
                       N+I+  + +  K   ++   E       +++R L+ I  +   KI  L
Sbjct: 91  QLTYNPDESSKPNMIDAATLKSRKMLEEIMKYEASILTHDSSIRYLQEIYNSNNQKIVNL 150

Query: 707 ESDVLAQMEYCRTPCTVTCNIPVVSGKECEEIIRNGGETSEMYLIQPSDSIEPYRVYCDM 886
           +  V      C+ PC  T  I  ++GK+C++I   G + S +Y I+P  + + + VYC++
Sbjct: 151 KEKVAQLEAQCQEPCKDTVQIHDITGKDCQDIANKGAKQSGLYFIKPLKANQQFLVYCEI 210

Query: 887 KTERGGWTVIQNRQDGSVDFGRKWDPYKQG 976
                GWTV Q R DGSVDF + W  YK+G
Sbjct: 211 DGSGNGWTVFQKRLDGSVDFKKNWIQYKEG 240



 Score = 48.1 bits (113), Expect(2) = 8e-28
 Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
 Frame = +1

Query: 1033 EYWLGNDKISQLTRMG--PTKLLIEMEDWEGGKVKAIYEGFTVQNEANKYQISLSKYK-G 1203
            E+WLGN+KI  ++     P  L +E+EDW G    A Y  F V  EA+KY+++ + +  G
Sbjct: 251  EFWLGNEKIHLISTQSAIPYALRVELEDWNGRTSTADYAMFKVGPEADKYRLTYAYFAGG 310

Query: 1204 TAGNA 1218
             AG+A
Sbjct: 311  DAGDA 315


>ref|NP_001112359.1| angiopoietin-2 isoform b precursor [Homo sapiens].
          Length = 495

 Score = 78.2 bits (191), Expect(2) = 2e-26
 Identities = 43/158 (27%), Positives = 81/158 (51%), Gaps = 7/158 (4%)
 Frame = +2

Query: 524 KRLWKDRQKQRRDNENVINEFSSELEKHQLYIDETVNSNIPTNLR-------VLRAILEN 682
           K  + +++    +++++I   S + EK QL +  +  ++I   L        V  ++L+ 
Sbjct: 187 KNSFLEKKVLAMEDKHIIQLQSIKEEKDQLQVLVSKQNSIIEELEKKIVTATVNNSVLQK 246

Query: 683 LRSKIQKLESDVLAQMEYCRTPCTVTCNIPVVSGKECEEIIRNGGETSEMYLIQPSDSIE 862
            +  + +  +++L  M    +          +S ++C E+ ++G  T+ +Y +   +S E
Sbjct: 247 QQHDLMETVNNLLTMMSTSNSKDPTVAKEEQISFRDCAEVFKSGHTTNGIYTLTFPNSTE 306

Query: 863 PYRVYCDMKTERGGWTVIQNRQDGSVDFGRKWDPYKQG 976
             + YCDM+   GGWT+IQ R+DGSVDF R W  YK G
Sbjct: 307 EIKAYCDMEAGGGGWTIIQRREDGSVDFQRTWKEYKVG 344



 Score = 60.5 bits (145), Expect(2) = 2e-26
 Identities = 28/61 (45%), Positives = 38/61 (62%)
 Frame = +1

Query: 1030 GEYWLGNDKISQLTRMGPTKLLIEMEDWEGGKVKAIYEGFTVQNEANKYQISLSKYKGTA 1209
            GEYWLGN+ +SQLT      L I ++DWEG +  ++YE F + +E   Y+I L    GTA
Sbjct: 350  GEYWLGNEFVSQLTNQQRYVLKIHLKDWEGNEAYSLYEHFYLSSEELNYRIHLKGLTGTA 409

Query: 1210 G 1212
            G
Sbjct: 410  G 410


>ref|NP_001138.1| angiopoietin-2 isoform a precursor [Homo sapiens].
          Length = 496

 Score = 76.3 bits (186), Expect(2) = 7e-26
 Identities = 46/161 (28%), Positives = 86/161 (53%), Gaps = 10/161 (6%)
 Frame = +2

Query: 524 KRLWKDRQKQRRDNENVINEFSSELEKHQLYIDETVNSNIPTNL--RVLRAILENLRSKI 697
           K  + +++    +++++I   S + EK QL +  +  ++I   L  +++ A + N  S +
Sbjct: 187 KNSFLEKKVLAMEDKHIIQLQSIKEEKDQLQVLVSKQNSIIEELEKKIVTATVNN--SVL 244

Query: 698 QKLESDVLAQMEYCRTPCTVTCNIP--------VVSGKECEEIIRNGGETSEMYLIQPSD 853
           QK + D++  +    T  + + +           +S ++C E+ ++G  T+ +Y +   +
Sbjct: 245 QKQQHDLMETVNNLLTMMSTSNSAKDPTVAKEEQISFRDCAEVFKSGHTTNGIYTLTFPN 304

Query: 854 SIEPYRVYCDMKTERGGWTVIQNRQDGSVDFGRKWDPYKQG 976
           S E  + YCDM+   GGWT+IQ R+DGSVDF R W  YK G
Sbjct: 305 STEEIKAYCDMEAGGGGWTIIQRREDGSVDFQRTWKEYKVG 345



 Score = 60.5 bits (145), Expect(2) = 7e-26
 Identities = 28/61 (45%), Positives = 38/61 (62%)
 Frame = +1

Query: 1030 GEYWLGNDKISQLTRMGPTKLLIEMEDWEGGKVKAIYEGFTVQNEANKYQISLSKYKGTA 1209
            GEYWLGN+ +SQLT      L I ++DWEG +  ++YE F + +E   Y+I L    GTA
Sbjct: 351  GEYWLGNEFVSQLTNQQRYVLKIHLKDWEGNEAYSLYEHFYLSSEELNYRIHLKGLTGTA 410

Query: 1210 G 1212
            G
Sbjct: 411  G 411


>ref|NP_001112360.1| angiopoietin-2 isoform c precursor [Homo sapiens].
          Length = 444

 Score = 76.3 bits (186), Expect(2) = 7e-26
 Identities = 46/161 (28%), Positives = 86/161 (53%), Gaps = 10/161 (6%)
 Frame = +2

Query: 524 KRLWKDRQKQRRDNENVINEFSSELEKHQLYIDETVNSNIPTNL--RVLRAILENLRSKI 697
           K  + +++    +++++I   S + EK QL +  +  ++I   L  +++ A + N  S +
Sbjct: 135 KNSFLEKKVLAMEDKHIIQLQSIKEEKDQLQVLVSKQNSIIEELEKKIVTATVNN--SVL 192

Query: 698 QKLESDVLAQMEYCRTPCTVTCNIP--------VVSGKECEEIIRNGGETSEMYLIQPSD 853
           QK + D++  +    T  + + +           +S ++C E+ ++G  T+ +Y +   +
Sbjct: 193 QKQQHDLMETVNNLLTMMSTSNSAKDPTVAKEEQISFRDCAEVFKSGHTTNGIYTLTFPN 252

Query: 854 SIEPYRVYCDMKTERGGWTVIQNRQDGSVDFGRKWDPYKQG 976
           S E  + YCDM+   GGWT+IQ R+DGSVDF R W  YK G
Sbjct: 253 STEEIKAYCDMEAGGGGWTIIQRREDGSVDFQRTWKEYKVG 293



 Score = 60.5 bits (145), Expect(2) = 7e-26
 Identities = 28/61 (45%), Positives = 38/61 (62%)
 Frame = +1

Query: 1030 GEYWLGNDKISQLTRMGPTKLLIEMEDWEGGKVKAIYEGFTVQNEANKYQISLSKYKGTA 1209
            GEYWLGN+ +SQLT      L I ++DWEG +  ++YE F + +E   Y+I L    GTA
Sbjct: 299  GEYWLGNEFVSQLTNQQRYVLKIHLKDWEGNEAYSLYEHFYLSSEELNYRIHLKGLTGTA 358

Query: 1210 G 1212
            G
Sbjct: 359  G 359


>ref|NP_006673.1| fibroleukin precursor [Homo sapiens].
          Length = 439

 Score = 69.7 bits (169), Expect(3) = 4e-25
 Identities = 41/134 (30%), Positives = 59/134 (44%)
 Frame = +2

Query: 575 INEFSSELEKHQLYIDETVNSNIPTNLRVLRAILENLRSKIQKLESDVLAQMEYCRTPCT 754
           IN     LEK  L     + + + + +  L  ++ +L  K  K  S    Q         
Sbjct: 151 INVLHGRLEKLNLVNMNNIENYVDSKVANLTFVVNSLDGKCSKCPSQEQIQSR------- 203

Query: 755 VTCNIPVVSGKECEEIIRNGGETSEMYLIQPSDSIEPYRVYCDMKTERGGWTVIQNRQDG 934
               +  +  K+C +    G  +SE Y + P      + VYCDM+T  GGWTV+Q R DG
Sbjct: 204 ---PVQHLIYKDCSDYYAIGKRSSETYRVTPDPKNSSFEVYCDMETMGGGWTVLQARLDG 260

Query: 935 SVDFGRKWDPYKQG 976
           S +F R W  YK G
Sbjct: 261 STNFTRTWQDYKAG 274



 Score = 63.5 bits (153), Expect(3) = 4e-25
 Identities = 30/63 (47%), Positives = 43/63 (68%)
 Frame = +1

Query: 1033 EYWLGNDKISQLTRMGPTKLLIEMEDWEGGKVKAIYEGFTVQNEANKYQISLSKYKGTAG 1212
            E+WLGNDKI  LT+     L I++ED+ G ++ A+Y+ F V NE  KY++ +  Y GTAG
Sbjct: 281  EFWLGNDKIHLLTKSKEMILRIDLEDFNGVELYALYDQFYVANEFLKYRLHVGNYNGTAG 340

Query: 1213 NAL 1221
            +AL
Sbjct: 341  DAL 343



 Score = 21.2 bits (43), Expect(3) = 4e-25
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +2

Query: 1271 HNSMFFSTYNRDNER 1315
            H+  FF+T ++DN+R
Sbjct: 351  HDLKFFTTPDKDNDR 365


>ref|NP_004664.1| angiopoietin-related protein 1 precursor [Homo sapiens].
          Length = 491

 Score = 67.8 bits (164), Expect(2) = 2e-24
 Identities = 28/64 (43%), Positives = 43/64 (67%)
 Frame = +2

Query: 785 KECEEIIRNGGETSEMYLIQPSDSIEPYRVYCDMKTERGGWTVIQNRQDGSVDFGRKWDP 964
           K+C++    G   S +Y+I+P +S  P +++C+   + GGWTVIQ R DGSV+F R W+ 
Sbjct: 278 KDCQQAKEAGHSVSGIYMIKPENSNGPMQLWCENSLDPGGWTVIQKRTDGSVNFFRNWEN 337

Query: 965 YKQG 976
           YK+G
Sbjct: 338 YKKG 341



 Score = 64.3 bits (155), Expect(2) = 2e-24
 Identities = 30/72 (41%), Positives = 44/72 (61%)
 Frame = +1

Query: 1009 KKYCGIPGEYWLGNDKISQLTRMGPTKLLIEMEDWEGGKVKAIYEGFTVQNEANKYQISL 1188
            K +  I GEYWLG + I  L+     KLLIE+EDW   KV A Y  F ++ E+  Y++ L
Sbjct: 340  KGFGNIDGEYWLGLENIYMLSNQDNYKLLIELEDWSDKKVYAEYSSFRLEPESEFYRLRL 399

Query: 1189 SKYKGTAGNALL 1224
              Y+G AG++++
Sbjct: 400  GTYQGNAGDSMM 411


>ref|NP_066969.1| angiopoietin-related protein 7 precursor [Homo sapiens].
          Length = 346

 Score = 68.2 bits (165), Expect(3) = 5e-24
 Identities = 33/76 (43%), Positives = 46/76 (60%)
 Frame = +1

Query: 1000 QMGKKYCGIPGEYWLGNDKISQLTRMGPTKLLIEMEDWEGGKVKAIYEGFTVQNEANKYQ 1179
            Q  + +  I G++WLGN+ I +L+R  PT+L +EMEDWEG    A Y  F + NE N Y+
Sbjct: 190  QYKQGFGSIRGDFWLGNEHIHRLSRQ-PTRLRVEMEDWEGNLRYAEYSHFVLGNELNSYR 248

Query: 1180 ISLSKYKGTAGNALLE 1227
            + L  Y G  GN  L+
Sbjct: 249  LFLGNYTGNVGNDALQ 264



 Score = 61.2 bits (147), Expect(3) = 5e-24
 Identities = 37/150 (24%), Positives = 75/150 (50%), Gaps = 3/150 (2%)
 Frame = +2

Query: 536 KDRQKQRRDNENVINEFSSELEKHQLYIDETVNSNIPTNLRVLRAILENLRSKIQKLESD 715
           K+ + Q  +  ++++E + + E+  + +   V   + +N + + + L +  SK  ++ + 
Sbjct: 50  KELKAQVANLSSLLSELNKKQERDWVSVVMQV-MELESNSKRMESRLTDAESKYSEMNNQ 108

Query: 716 V-LAQMEYCRTPCTVTCNIPVVSGKECEEIIRNGGETSEMYLIQPSDSI--EPYRVYCDM 886
           + + Q++  +T    + +       +C  + +     S +Y + P D +      V+CDM
Sbjct: 109 IDIMQLQAAQTVTQTSADAIY----DCSSLYQKNYRISGVYKLPPDDFLGSPELEVFCDM 164

Query: 887 KTERGGWTVIQNRQDGSVDFGRKWDPYKQG 976
           +T  GGWT+IQ R+ G V F R W  YKQG
Sbjct: 165 ETSGGGWTIIQRRKSGLVSFYRDWKQYKQG 194



 Score = 21.2 bits (43), Expect(3) = 5e-24
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +2

Query: 1262 MNIHNSMFFSTYNRDNE 1312
            +  HN+  FST ++DN+
Sbjct: 263  LQYHNNTAFSTKDKDND 279


  Database: RefSeq49_HP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,297,164
  Number of sequences in database:  32,964
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 53,307,975
Number of extensions: 1400540
Number of successful extensions: 4170
Number of sequences better than 1.0e-05: 37
Number of HSP's gapped: 4144
Number of HSP's successfully gapped: 97
Length of query: 454
Length of database: 18,297,164
Length adjustment: 106
Effective length of query: 348
Effective length of database: 14,802,980
Effective search space: 5151437040
Effective search space used: 5151437040
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

Search to RefSeqMP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-007023
         (1363 letters)

Database: RefSeq49_MP.fasta 
           30,036 sequences; 15,617,559 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_862897.1| fibrinogen beta chain precursor [Mus musculus].      444   e-127
Alignment   gi|NP_031452.2| angiopoietin-2 precursor [Mus musculus].              73   4e-25
Alignment   gi|NP_082609.2| angiopoietin-related protein 1 precursor [Mus m...    66   6e-24
Alignment   gi|NP_032039.2| fibroleukin precursor [Mus musculus].                 63   2e-23
Alignment   gi|NP_033770.2| angiopoietin-1 precursor [Mus musculus].              66   4e-22
Alignment   gi|NP_849218.2| fibrinogen C domain-containing protein 1 [Mus m...    70   1e-21
Alignment   gi|NP_034320.1| ficolin-2 precursor [Mus musculus].                   62   3e-21
Alignment   gi|NP_001034643.1| angiopoietin-related protein 7 precursor [Mu...    64   5e-21
Alignment   gi|NP_598623.1| fibrinogen gamma chain precursor [Mus musculus].      96   7e-20
Alignment   gi|NP_660136.1| angiopoietin-related protein 6 precursor [Mus m...    64   7e-20

>ref|NP_862897.1| fibrinogen beta chain precursor [Mus musculus].
          Length = 481

 Score =  444 bits (1141), Expect(2) = e-127
 Identities = 243/410 (59%), Positives = 275/410 (67%), Gaps = 12/410 (2%)
 Frame = +2

Query: 119  CVFIIKAQAAID-YDEDEDGRPKVHVDARGHRPYDKRREEAPSLRPVAPPISAGGYQPRP 295
            CVF ++ QAA D YDE  D      +DARGHRP D+R+EE PSLRP  PPIS GGY+ RP
Sbjct: 11   CVFSVQTQAADDDYDEPTDS-----LDARGHRPVDRRKEEPPSLRPAPPPISGGGYRARP 65

Query: 296  AKVAIGQKKVERKPPDAGGCLHADPDLGVLCPTGCQLQDTLLKQERPIKTSIEELNXXXX 475
            AK    QKKVER+PPDAGGCLHAD D+GVLCPTGC LQ TLL QERPIK+SI ELN    
Sbjct: 66   AKATANQKKVERRPPDAGGCLHADTDMGVLCPTGCTLQQTLLNQERPIKSSIAELNNNIQ 125

Query: 476  XXXXXXXXTFQYMTLLKRLWKDRQKQRRDNENVINEFSSELEKHQLYIDETVNSNIPTNL 655
                    TFQY+TLLK +WK +Q Q ++NENVINE+SS LE  +LYIDETVN NIP NL
Sbjct: 126  SVSDTSSVTFQYLTLLKDMWKKKQAQVKENENVINEYSSILEDQRLYIDETVNDNIPLNL 185

Query: 656  RVLRAILENLRSKIQKLESDVLAQMEYCRTPCTVTCNIPVVSGKECEEIIRNGGETSEMY 835
            RVLR+ILE+LRSKIQKLESD+ AQMEYCRTPCTV+CNIPVVSGKECEEIIR GGETSEMY
Sbjct: 186  RVLRSILEDLRSKIQKLESDISAQMEYCRTPCTVSCNIPVVSGKECEEIIRKGGETSEMY 245

Query: 836  LIQPSDSIEPYRVYCDMKTERGGWTVIQNRQDGSVDFGRKWDPYKQGIW---------KY 988
            LIQP  SI+PYRVYCDMKTE GGWTVIQNRQDGSVDFGRKWDPYK+G           KY
Sbjct: 246  LIQPDTSIKPYRVYCDMKTENGGWTVIQNRQDGSVDFGRKWDPYKKGFGNIATNEDAKKY 305

Query: 989  CNQC--KWEKNIVAYQVSIGLEMIKLASLPGWDPQSF*SKWRTGKEAR*RQSTKDSLCRT 1162
            C      W  N    Q++       L  +  W       K   G      +++K  +   
Sbjct: 306  CGLPGEYWLGNDKISQLTRMGPTELLIEMEDWKGDKV--KAHYGGFTVQNEASKYQVSVN 363

Query: 1163 KPINTRSR*ANTREQLATPSWKEPLNWWEKTRTMNIHNSMFFSTYNRDNE 1312
            K   T     N     A+    E        RTM IHN MFFSTY+RDN+
Sbjct: 364  KYKGTA---GNALMDGASQLVGE-------NRTMTIHNGMFFSTYDRDND 403



 Score = 30.4 bits (67), Expect(2) = e-127
 Identities = 11/13 (84%), Positives = 12/13 (92%)
 Frame = +3

Query: 1311 NGWKTTDPRKQCS 1349
            +GW TTDPRKQCS
Sbjct: 403  DGWVTTDPRKQCS 415


>ref|NP_031452.2| angiopoietin-2 precursor [Mus musculus].
          Length = 496

 Score = 73.2 bits (178), Expect(2) = 4e-25
 Identities = 32/64 (50%), Positives = 43/64 (67%)
 Frame = +2

Query: 785 KECEEIIRNGGETSEMYLIQPSDSIEPYRVYCDMKTERGGWTVIQNRQDGSVDFGRKWDP 964
           ++C EI ++G  TS +Y +   +S E  + YCDM    GGWTVIQ+R+DGSVDF R W  
Sbjct: 282 RDCAEIFKSGLTTSGIYTLTFPNSTEEIKAYCDMDVGGGGWTVIQHREDGSVDFQRTWKE 341

Query: 965 YKQG 976
           YK+G
Sbjct: 342 YKEG 345



 Score = 60.8 bits (146), Expect(2) = 4e-25
 Identities = 27/61 (44%), Positives = 40/61 (65%)
 Frame = +1

Query: 1030 GEYWLGNDKISQLTRMGPTKLLIEMEDWEGGKVKAIYEGFTVQNEANKYQISLSKYKGTA 1209
            GEYWLGN+ +SQLT      L I+++DWEG +  ++Y+ F +  E + Y+I L+   GTA
Sbjct: 351  GEYWLGNEFVSQLTGQHRYVLKIQLKDWEGNEAHSLYDHFYLAGEESNYRIHLTGLTGTA 410

Query: 1210 G 1212
            G
Sbjct: 411  G 411


>ref|NP_082609.2| angiopoietin-related protein 1 precursor [Mus musculus].
          Length = 490

 Score = 65.9 bits (159), Expect(2) = 6e-24
 Identities = 30/72 (41%), Positives = 46/72 (63%)
 Frame = +1

Query: 1009 KKYCGIPGEYWLGNDKISQLTRMGPTKLLIEMEDWEGGKVKAIYEGFTVQNEANKYQISL 1188
            K +  I GEYWLG D I +L+     KL+IE+EDW   KV A Y  F ++ E++ Y++ L
Sbjct: 339  KGFGNIDGEYWLGLDNIYKLSNQDNYKLMIELEDWSEKKVYAEYSSFRLEPESDYYRLRL 398

Query: 1189 SKYKGTAGNALL 1224
              Y+G AG++++
Sbjct: 399  GTYQGNAGDSMM 410



 Score = 64.3 bits (155), Expect(2) = 6e-24
 Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 6/94 (6%)
 Frame = +2

Query: 713 DVLAQMEYCRTPCTVTCNIPVVSG------KECEEIIRNGGETSEMYLIQPSDSIEPYRV 874
           DV+   +    P      IP V+       K+C++    G   S +Y+I+P +S    ++
Sbjct: 247 DVMPPPDLPTAPTKSPFKIPAVTFINEGPFKDCQQAKEAGHSASGIYMIKPENSNGLMQL 306

Query: 875 YCDMKTERGGWTVIQNRQDGSVDFGRKWDPYKQG 976
           +C+   + GGWTVIQ R DGSV+F R W+ YK+G
Sbjct: 307 WCENSLDPGGWTVIQKRTDGSVNFFRNWENYKKG 340


>ref|NP_032039.2| fibroleukin precursor [Mus musculus].
          Length = 432

 Score = 62.8 bits (151), Expect(3) = 2e-23
 Identities = 28/64 (43%), Positives = 37/64 (57%)
 Frame = +2

Query: 785 KECEEIIRNGGETSEMYLIQPSDSIEPYRVYCDMKTERGGWTVIQNRQDGSVDFGRKWDP 964
           K+C +    G  +S  Y + P      + VYCDM+T  GGWTV+Q R DGS +F R+W  
Sbjct: 204 KDCSDHYVLGRRSSGAYRVTPDHRNSSFEVYCDMETMGGGWTVLQARLDGSTNFTREWKD 263

Query: 965 YKQG 976
           YK G
Sbjct: 264 YKAG 267



 Score = 62.8 bits (151), Expect(3) = 2e-23
 Identities = 30/63 (47%), Positives = 42/63 (66%)
 Frame = +1

Query: 1033 EYWLGNDKISQLTRMGPTKLLIEMEDWEGGKVKAIYEGFTVQNEANKYQISLSKYKGTAG 1212
            E+WLGNDKI  LT+     L I++ED+ G  + A+Y+ F V NE  KY++ +  Y GTAG
Sbjct: 274  EFWLGNDKIHLLTKSKEMILRIDLEDFNGLTLYALYDQFYVANEFLKYRLHIGNYNGTAG 333

Query: 1213 NAL 1221
            +AL
Sbjct: 334  DAL 336



 Score = 22.3 bits (46), Expect(3) = 2e-23
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +2

Query: 1271 HNSMFFSTYNRDNER 1315
            H+  FF+T +RDN+R
Sbjct: 344  HDLRFFTTPDRDNDR 358


>ref|NP_033770.2| angiopoietin-1 precursor [Mus musculus].
          Length = 498

 Score = 66.2 bits (160), Expect(2) = 4e-22
 Identities = 28/64 (43%), Positives = 42/64 (65%)
 Frame = +2

Query: 785 KECEEIIRNGGETSEMYLIQPSDSIEPYRVYCDMKTERGGWTVIQNRQDGSVDFGRKWDP 964
           ++C ++ + G   S +Y I  ++  EP +V+C+M    GGWTVIQ+R+DGS+DF R W  
Sbjct: 284 RDCADVYQAGFNKSGIYTIYFNNMPEPKKVFCNMDVNGGGWTVIQHREDGSLDFQRGWKE 343

Query: 965 YKQG 976
           YK G
Sbjct: 344 YKMG 347



 Score = 57.8 bits (138), Expect(2) = 4e-22
 Identities = 29/71 (40%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
 Frame = +1

Query: 1030 GEYWLGNDKISQLTRMGPTKLLIEMEDWEGGKVKAIYEGFTVQNEANKYQISLSKYKGTA 1209
            GEYWLGN+ I  +T      L IE+ DWEG +  + Y+ F + NE   Y++ L  + GTA
Sbjct: 353  GEYWLGNEFIFAITSQRQYMLRIELMDWEGNRAYSQYDRFHIGNEKQNYRLYLKGHTGTA 412

Query: 1210 G---NALLEGA 1233
            G   + +L GA
Sbjct: 413  GKQSSLILHGA 423


>ref|NP_849218.2| fibrinogen C domain-containing protein 1 [Mus musculus].
          Length = 459

 Score = 70.1 bits (170), Expect(3) = 1e-21
 Identities = 28/67 (41%), Positives = 46/67 (68%)
 Frame = +2

Query: 785 KECEEIIRNGGETSEMYLIQPSDSIEPYRVYCDMKTERGGWTVIQNRQDGSVDFGRKWDP 964
           ++C +++ +G +   +Y I P+     ++VYCDM+T+ GGWTV Q R+DGSV+F R W+ 
Sbjct: 240 RDCLDVLLSGQQDDGVYSIFPTHYPAGFQVYCDMRTDGGGWTVFQRREDGSVNFFRGWEA 299

Query: 965 YKQGIWK 985
           Y++G  K
Sbjct: 300 YREGFGK 306



 Score = 49.7 bits (117), Expect(3) = 1e-21
 Identities = 25/73 (34%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
 Frame = +1

Query: 1024 IPGEYWLGNDKISQLTRMGPTKLLIEMEDWEGGKVKAIYEG-----FTVQNEANKYQISL 1188
            + GE+WLG  +I  LT     +L +++ED++ G   A Y       F+V  E + Y +++
Sbjct: 307  LTGEHWLGLKRIHALTTQAAYELHVDLEDFDNGTAYAHYGSFGVGLFSVDPEEDGYPLTV 366

Query: 1189 SKYKGTAGNALLE 1227
            + Y GTAG++LL+
Sbjct: 367  ADYSGTAGDSLLK 379



 Score = 22.3 bits (46), Expect(3) = 1e-21
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +2

Query: 1271 HNSMFFSTYNRDNERLENH 1327
            H+ M F+T +RD++  EN+
Sbjct: 380  HSGMRFTTKDRDSDHSENN 398


>ref|NP_034320.1| ficolin-2 precursor [Mus musculus].
          Length = 314

 Score = 61.6 bits (148), Expect(3) = 3e-21
 Identities = 30/64 (46%), Positives = 37/64 (57%)
 Frame = +2

Query: 785 KECEEIIRNGGETSEMYLIQPSDSIEPYRVYCDMKTERGGWTVIQNRQDGSVDFGRKWDP 964
           + C+E++  G   +  Y I   D   P  V CDM T+ GGWTV Q R DGSVDF R W  
Sbjct: 104 RTCKELLTQGHFLTGWYTIYLPDC-RPLTVLCDMDTDGGGWTVFQRRLDGSVDFFRDWTS 162

Query: 965 YKQG 976
           YK+G
Sbjct: 163 YKRG 166



 Score = 57.8 bits (138), Expect(3) = 3e-21
 Identities = 28/65 (43%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
 Frame = +1

Query: 1030 GEYWLGNDKISQLTRMGPTKLLIEMEDWEGGKVKAIYEGFTVQNEANKYQISLSKY-KGT 1206
            GE+WLGND I  LT  G ++L +++ D+EG    A Y  F +Q EA KY++ L  +  G 
Sbjct: 172  GEFWLGNDNIHALTTQGTSELRVDLSDFEGKHDFAKYSSFQIQGEAEKYKLILGNFLGGG 231

Query: 1207 AGNAL 1221
            AG++L
Sbjct: 232  AGDSL 236



 Score = 21.2 bits (43), Expect(3) = 3e-21
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +2

Query: 1271 HNSMFFSTYNRDNE 1312
            HN+  FST ++DN+
Sbjct: 239  HNNRLFSTKDQDND 252


>ref|NP_001034643.1| angiopoietin-related protein 7 precursor [Mus musculus].
          Length = 337

 Score = 64.3 bits (155), Expect(3) = 5e-21
 Identities = 31/75 (41%), Positives = 44/75 (58%)
 Frame = +1

Query: 1000 QMGKKYCGIPGEYWLGNDKISQLTRMGPTKLLIEMEDWEGGKVKAIYEGFTVQNEANKYQ 1179
            Q  + +  I G++WLGN+ I +LTR  P++L +E+EDWEG    A Y  F + NE N Y+
Sbjct: 181  QYKQGFGSIRGDFWLGNEHIHRLTRQ-PSRLRVELEDWEGNARYAEYSYFALGNELNSYR 239

Query: 1180 ISLSKYKGTAGNALL 1224
            + L  Y G  G   L
Sbjct: 240  LFLGNYSGNVGKDAL 254



 Score = 54.7 bits (130), Expect(3) = 5e-21
 Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
 Frame = +2

Query: 788 ECEEIIRNGGETSEMYLIQPSDSI--EPYRVYCDMKTERGGWTVIQNRQDGSVDFGRKWD 961
           +C  + +     S +Y + P + +      V+CDM+T  GGWT+IQ R+ G V F + W 
Sbjct: 121 DCSSLYQKNYRISGVYKLPPDEFLGSPELEVFCDMETSGGGWTIIQRRKSGLVSFYQDWR 180

Query: 962 PYKQG 976
            YKQG
Sbjct: 181 QYKQG 185



 Score = 21.2 bits (43), Expect(3) = 5e-21
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +2

Query: 1271 HNSMFFSTYNRDNE 1312
            HN+  FST ++DN+
Sbjct: 257  HNNTVFSTKDKDND 270


>ref|NP_598623.1| fibrinogen gamma chain precursor [Mus musculus].
          Length = 436

 Score = 95.9 bits (237), Expect = 7e-20
 Identities = 81/337 (24%), Positives = 141/337 (41%), Gaps = 8/337 (2%)
 Frame = +2

Query: 353  CLHADPDLGVLCPTGCQLQDTLLKQERPIKTSIEELNXXXXXXXXXXXXTFQYMTLLKRL 532
            C   D   G  CPT C + D L   +  +   +  L             T +   L+K +
Sbjct: 33   CCILDERFGSFCPTTCGIADFLSSYQTDVDNDLRTLEDILFRAENR---TTEAKELIKAI 89

Query: 533  WKDRQKQRRDNENVINEFSSELEK--HQLYIDETVNSNIPTNLRVLRAILENLRSKIQKL 706
                   +     +I+  + + +K   ++   E +     T++R L+ I  +   KI  L
Sbjct: 90   QVYYNPDQPPKPGMIDSATQKSKKMVEEIVKYEALLLTHETSIRYLQEIYNSNNQKITNL 149

Query: 707  ESDVLAQMEYCRTPCTVTCNIPVVSGKECEEIIRNGGETSEMYLIQPSDSIEPYRVYCDM 886
            +  V      C+ PC  +  I   +GK+C+EI   G + S +Y I+P  + + + VYC++
Sbjct: 150  KQKVAQLEAQCQEPCKDSVQIHDTTGKDCQEIANKGAKESGLYFIRPLKAKQQFLVYCEI 209

Query: 887  KTERGGWTVIQNRQDGSVDFGRKWDPYKQGIWKYCNQCKWEKNIVAYQVSIGLEMIKLAS 1066
                 GWTV+Q R DGS+DF + W  YK+G          E         +G E I L S
Sbjct: 210  DGSGNGWTVLQKRIDGSLDFKKNWIQYKEGFGHLSPTGTTE-------FWLGNEKIHLIS 262

Query: 1067 LPGWDPQSF*SKWRTGKEAR*RQSTKD-SLCRTKPINTRSR*ANTREQLATPSWKEPLNW 1243
            +    P +   +    K+   R ST D ++ R  P + + R   T          +  + 
Sbjct: 263  MQSTIPYALRIQL---KDWNGRTSTADYAMFRVGPESDKYR--LTYAYFIGGDAGDAFDG 317

Query: 1244 WE-----KTRTMNIHNSMFFSTYNRDNERLENHRSQK 1339
            ++       +    HN M FST++ DN++ E + +++
Sbjct: 318  YDFGDDPSDKFFTSHNGMQFSTWDNDNDKFEGNCAEQ 354


>ref|NP_660136.1| angiopoietin-related protein 6 precursor [Mus musculus].
          Length = 457

 Score = 63.5 bits (153), Expect(2) = 7e-20
 Identities = 27/64 (42%), Positives = 44/64 (68%)
 Frame = +1

Query: 1030 GEYWLGNDKISQLTRMGPTKLLIEMEDWEGGKVKAIYEGFTVQNEANKYQISLSKYKGTA 1209
            GEYWLG + + Q+T  G  +LLI +EDW G   +A Y+ F+++ E++ Y++ L +Y G A
Sbjct: 312  GEYWLGLEPVHQVTSRGDHELLILLEDWGGRAARAHYDSFSLEPESDHYRLRLGQYHGDA 371

Query: 1210 GNAL 1221
            G++L
Sbjct: 372  GDSL 375



 Score = 52.8 bits (125), Expect(2) = 7e-20
 Identities = 28/69 (40%), Positives = 38/69 (55%)
 Frame = +2

Query: 770 PVVSGKECEEIIRNGGETSEMYLIQPSDSIEPYRVYCDMKTERGGWTVIQNRQDGSVDFG 949
           PV   ++C E    G   S +Y ++    +    V+C+ + E GGWTVIQ RQDGSV+F 
Sbjct: 240 PVGPWRDCAEAHGAGHWQSGVYDLRLGRRV--VAVWCEQQQEGGGWTVIQRRQDGSVNFF 297

Query: 950 RKWDPYKQG 976
             W  YK G
Sbjct: 298 TNWQHYKAG 306


  Database: RefSeq49_MP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 15,617,559
  Number of sequences in database:  30,036
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 45,462,741
Number of extensions: 1197717
Number of successful extensions: 3526
Number of sequences better than 1.0e-05: 22
Number of HSP's gapped: 3503
Number of HSP's successfully gapped: 58
Length of query: 454
Length of database: 15,617,559
Length adjustment: 105
Effective length of query: 349
Effective length of database: 12,463,779
Effective search space: 4349858871
Effective search space used: 4349858871
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

Search to RefSeqSP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-007023
         (1363 letters)

Database: RefSeq49_SP.fasta 
           24,897 sequences; 11,343,932 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_003129176.1| PREDICTED: fibrinogen beta chain isoform 1 [...   604   e-176
Alignment   gi|XP_003129177.1| PREDICTED: fibrinogen beta chain isoform 2 [...   582   e-169
Alignment   gi|XP_003357036.1| PREDICTED: fibrinogen beta chain [Sus scrofa].    424   e-122
Alignment   gi|XP_003361238.1| PREDICTED: fibrinogen gamma chain-like [Sus ...    94   7e-29
Alignment   gi|XP_003129181.2| PREDICTED: fibrinogen gamma chain [Sus scrof...    94   7e-29
Alignment   gi|NP_001005152.1| fibroleukin [Sus scrofa].                          74   3e-27
Alignment   gi|NP_001136300.1| angiopoietin-related protein 7 [Sus scrofa].       70   2e-24
Alignment   gi|NP_001103417.1| angiopoietin-related protein 1 [Sus scrofa].       67   7e-24
Alignment   gi|NP_999124.1| angiopoietin-1 precursor [Sus scrofa].                66   8e-22
Alignment   gi|XP_003122287.1| PREDICTED: fibrinogen C domain-containing pr...    69   2e-21

>ref|XP_003129176.1| PREDICTED: fibrinogen beta chain isoform 1 [Sus scrofa].
          Length = 495

 Score =  604 bits (1558), Expect(2) = e-176
 Identities = 315/422 (74%), Positives = 330/422 (78%), Gaps = 4/422 (0%)
 Frame = +2

Query: 59   MVSWDFQKLKIMKPXXXXXXCVFIIKAQAAIDYDEDEDGRPKVHVDARGHRPYDKRREEA 238
            MVSWDFQKLKIMKP      CVFIIKAQAAIDYDEDEDGRPKVHVDARGHRPYDKRREEA
Sbjct: 1    MVSWDFQKLKIMKPLLLLLLCVFIIKAQAAIDYDEDEDGRPKVHVDARGHRPYDKRREEA 60

Query: 239  PSLRPVAPPISAGGYQPRPAKVAIGQKKVERKPPDAGGCLHADPDLGVLCPTGCQLQDTL 418
            PSLRPVAPPISAGGYQPRPAKVAIGQKKVERKPPDAGGCLHADPDLGVLCPTGCQLQDTL
Sbjct: 61   PSLRPVAPPISAGGYQPRPAKVAIGQKKVERKPPDAGGCLHADPDLGVLCPTGCQLQDTL 120

Query: 419  LKQERPIKTSIEELNXXXXXXXXXXXXTFQYMTLLKRLWKDRQKQRRDNENVINEFSSEL 598
            LKQERPIKTSIEELN            TFQYMTLLKRLWKDRQKQRRDNENVINEFSSEL
Sbjct: 121  LKQERPIKTSIEELNSNIDSVSQSSSSTFQYMTLLKRLWKDRQKQRRDNENVINEFSSEL 180

Query: 599  EKHQLYIDETVNSNIPTNLRVLRAILENLRSKIQKLESDVLAQMEYCRTPCTVTCNIPVV 778
            EKHQLYIDETVNSNIPTNLRVLRAILENLRSKIQKLESDVLAQMEYCRTPCTVTCNIPVV
Sbjct: 181  EKHQLYIDETVNSNIPTNLRVLRAILENLRSKIQKLESDVLAQMEYCRTPCTVTCNIPVV 240

Query: 779  SGKECEEIIRNGGETSEMYLIQPSDSIEPYRVYCDMKTERGGWTVIQNRQDGSVDFGRKW 958
            SGKECEEIIRNGGETSEMYLIQPSDSIEPYRVYCDMKTERGGWTVIQNRQDGSVDFGRKW
Sbjct: 241  SGKECEEIIRNGGETSEMYLIQPSDSIEPYRVYCDMKTERGGWTVIQNRQDGSVDFGRKW 300

Query: 959  DPYKQGIWKYCNQCKWEKNI-VAYQVSIGLEMIKLASLPGWDPQSF---*SKWRTGKEAR 1126
            DPYKQG          +K   +  +  +G +  K++ L    P         W  GK   
Sbjct: 301  DPYKQGFGNIATSADGKKYCGIPGEYWLGND--KISQLTRMGPTKLLIEMEDWEGGKVKA 358

Query: 1127 *RQSTKDSLCRTKPINTRSR*ANTREQLATPSWKEPLNWWEKTRTMNIHNSMFFSTYNRD 1306
              +         K   + S+   T          + +    + RTM IHNSMFFSTY+RD
Sbjct: 359  IYEGFTVQNEANKYQISLSKYKGTAGNALLEGASQLVG---ENRTMTIHNSMFFSTYDRD 415

Query: 1307 NE 1312
            N+
Sbjct: 416  ND 417



 Score = 33.1 bits (74), Expect(2) = e-176
 Identities = 12/13 (92%), Positives = 13/13 (100%)
 Frame = +3

Query: 1311 NGWKTTDPRKQCS 1349
            +GWKTTDPRKQCS
Sbjct: 417  DGWKTTDPRKQCS 429


>ref|XP_003129177.1| PREDICTED: fibrinogen beta chain isoform 2 [Sus scrofa].
          Length = 488

 Score =  582 bits (1500), Expect(2) = e-169
 Identities = 308/422 (72%), Positives = 323/422 (76%), Gaps = 4/422 (0%)
 Frame = +2

Query: 59   MVSWDFQKLKIMKPXXXXXXCVFIIKAQAAIDYDEDEDGRPKVHVDARGHRPYDKRREEA 238
            MVSWDFQKLKIMKP      CVFIIKAQAAIDYDE       VHVDARGHRPYDKRREEA
Sbjct: 1    MVSWDFQKLKIMKPLLLLLLCVFIIKAQAAIDYDE-------VHVDARGHRPYDKRREEA 53

Query: 239  PSLRPVAPPISAGGYQPRPAKVAIGQKKVERKPPDAGGCLHADPDLGVLCPTGCQLQDTL 418
            PSLRPVAPPISAGGYQPRPAKVAIGQKKVERKPPDAGGCLHADPDLGVLCPTGCQLQDTL
Sbjct: 54   PSLRPVAPPISAGGYQPRPAKVAIGQKKVERKPPDAGGCLHADPDLGVLCPTGCQLQDTL 113

Query: 419  LKQERPIKTSIEELNXXXXXXXXXXXXTFQYMTLLKRLWKDRQKQRRDNENVINEFSSEL 598
            LKQERPIKTSIEELN            TFQYMTLLKRLWKDRQKQRRDNENVINEFSSEL
Sbjct: 114  LKQERPIKTSIEELNSNIDSVSQSSSSTFQYMTLLKRLWKDRQKQRRDNENVINEFSSEL 173

Query: 599  EKHQLYIDETVNSNIPTNLRVLRAILENLRSKIQKLESDVLAQMEYCRTPCTVTCNIPVV 778
            EKHQLYIDETVNSNIPTNLRVLRAILENLRSKIQKLESDVLAQMEYCRTPCTVTCNIPVV
Sbjct: 174  EKHQLYIDETVNSNIPTNLRVLRAILENLRSKIQKLESDVLAQMEYCRTPCTVTCNIPVV 233

Query: 779  SGKECEEIIRNGGETSEMYLIQPSDSIEPYRVYCDMKTERGGWTVIQNRQDGSVDFGRKW 958
            SGKECEEIIRNGGETSEMYLIQPSDSIEPYRVYCDMKTERGGWTVIQNRQDGSVDFGRKW
Sbjct: 234  SGKECEEIIRNGGETSEMYLIQPSDSIEPYRVYCDMKTERGGWTVIQNRQDGSVDFGRKW 293

Query: 959  DPYKQGIWKYCNQCKWEKNI-VAYQVSIGLEMIKLASLPGWDPQSF---*SKWRTGKEAR 1126
            DPYKQG          +K   +  +  +G +  K++ L    P         W  GK   
Sbjct: 294  DPYKQGFGNIATSADGKKYCGIPGEYWLGND--KISQLTRMGPTKLLIEMEDWEGGKVKA 351

Query: 1127 *RQSTKDSLCRTKPINTRSR*ANTREQLATPSWKEPLNWWEKTRTMNIHNSMFFSTYNRD 1306
              +         K   + S+   T          + +    + RTM IHNSMFFSTY+RD
Sbjct: 352  IYEGFTVQNEANKYQISLSKYKGTAGNALLEGASQLVG---ENRTMTIHNSMFFSTYDRD 408

Query: 1307 NE 1312
            N+
Sbjct: 409  ND 410



 Score = 33.1 bits (74), Expect(2) = e-169
 Identities = 12/13 (92%), Positives = 13/13 (100%)
 Frame = +3

Query: 1311 NGWKTTDPRKQCS 1349
            +GWKTTDPRKQCS
Sbjct: 410  DGWKTTDPRKQCS 422


>ref|XP_003357036.1| PREDICTED: fibrinogen beta chain [Sus scrofa].
          Length = 432

 Score =  424 bits (1090), Expect(2) = e-122
 Identities = 247/422 (58%), Positives = 264/422 (62%), Gaps = 4/422 (0%)
 Frame = +2

Query: 59   MVSWDFQKLKIMKPXXXXXXCVFIIKAQAAIDYDEDEDGRPKVHVDARGHRPYDKRREEA 238
            MVSWDFQKLKIMKP      CVFIIKAQAAIDYDE       VHVDARGHRPYD      
Sbjct: 1    MVSWDFQKLKIMKPLLLLLLCVFIIKAQAAIDYDE-------VHVDARGHRPYD------ 47

Query: 239  PSLRPVAPPISAGGYQPRPAKVAIGQKKVERKPPDAGGCLHADPDLGVLCPTGCQLQDTL 418
                                      K+ E  P                        +TL
Sbjct: 48   --------------------------KRREEAP------------------------NTL 57

Query: 419  LKQERPIKTSIEELNXXXXXXXXXXXXTFQYMTLLKRLWKDRQKQRRDNENVINEFSSEL 598
            LKQERPIKTSIEELN            TFQYMTLLKRLWKDRQKQRRDNENVINEFSSEL
Sbjct: 58   LKQERPIKTSIEELNSNIDSVSQSSSSTFQYMTLLKRLWKDRQKQRRDNENVINEFSSEL 117

Query: 599  EKHQLYIDETVNSNIPTNLRVLRAILENLRSKIQKLESDVLAQMEYCRTPCTVTCNIPVV 778
            EKHQLYIDETVNSNIPTNLRVLRAILENLRSKIQKLESDVLAQMEYCRTPCTVTCNIPVV
Sbjct: 118  EKHQLYIDETVNSNIPTNLRVLRAILENLRSKIQKLESDVLAQMEYCRTPCTVTCNIPVV 177

Query: 779  SGKECEEIIRNGGETSEMYLIQPSDSIEPYRVYCDMKTERGGWTVIQNRQDGSVDFGRKW 958
            SGKECEEIIRNGGETSEMYLIQPSDSIEPYRVYCDMKTERGGWTVIQNRQDGSVDFGRKW
Sbjct: 178  SGKECEEIIRNGGETSEMYLIQPSDSIEPYRVYCDMKTERGGWTVIQNRQDGSVDFGRKW 237

Query: 959  DPYKQGIWKYCNQCKWEKNI-VAYQVSIGLEMIKLASLPGWDPQSF---*SKWRTGKEAR 1126
            DPYKQG          +K   +  +  +G +  K++ L    P         W  GK   
Sbjct: 238  DPYKQGFGNIATSADGKKYCGIPGEYWLGND--KISQLTRMGPTKLLIEMEDWEGGKVKA 295

Query: 1127 *RQSTKDSLCRTKPINTRSR*ANTREQLATPSWKEPLNWWEKTRTMNIHNSMFFSTYNRD 1306
              +         K   + S+   T          + +    + RTM IHNSMFFSTY+RD
Sbjct: 296  IYEGFTVQNEANKYQISLSKYKGTAGNALLEGASQLVG---ENRTMTIHNSMFFSTYDRD 352

Query: 1307 NE 1312
            N+
Sbjct: 353  ND 354



 Score = 33.1 bits (74), Expect(2) = e-122
 Identities = 12/13 (92%), Positives = 13/13 (100%)
 Frame = +3

Query: 1311 NGWKTTDPRKQCS 1349
            +GWKTTDPRKQCS
Sbjct: 354  DGWKTTDPRKQCS 366


>ref|XP_003361238.1| PREDICTED: fibrinogen gamma chain-like [Sus scrofa].
          Length = 438

 Score = 94.0 bits (232), Expect(3) = 7e-29
 Identities = 55/209 (26%), Positives = 91/209 (43%), Gaps = 1/209 (0%)
 Frame = +2

Query: 353 CLHADPDLGVLCPTGCQLQDTLLKQERPIKTSIEELNXXXXXXXXXXXXTFQYMTLLKRL 532
           C   D   G  CPT C +   L   +  ++  ++ L               + +  ++  
Sbjct: 35  CCILDERFGSYCPTMCGIAGFLSTYQNTVEKDLQNLEGILHQVENKTSEARELIKAIQIS 94

Query: 533 WKDRQKQRRDN-ENVINEFSSELEKHQLYIDETVNSNIPTNLRVLRAILENLRSKIQKLE 709
           +      + D  ++   E    LE+   Y  E + +   + +R L+ I  +   KI  L+
Sbjct: 95  YNPEDLSKPDRIQSATKESKKMLEEIMKY--ENLITTHDSTIRFLQEIYNSNNQKISNLK 152

Query: 710 SDVLAQMEYCRTPCTVTCNIPVVSGKECEEIIRNGGETSEMYLIQPSDSIEPYRVYCDMK 889
             V+     C+ PC  T  I   +GK+C+EI   G   S +Y I+P  + + + VYC++ 
Sbjct: 153 QKVIQLEAKCQEPCKDTVKIHDTTGKDCQEIANKGARESGLYFIKPLKAPKKFLVYCEID 212

Query: 890 TERGGWTVIQNRQDGSVDFGRKWDPYKQG 976
               GWTV Q R DGS DF + W  YK+G
Sbjct: 213 GSGNGWTVFQKRVDGSEDFKKNWIQYKEG 241



 Score = 47.0 bits (110), Expect(3) = 7e-29
 Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
 Frame = +1

Query: 1033 EYWLGNDKISQLTRMG--PTKLLIEMEDWEGGKVKAIYEGFTVQNEANKYQISLSKY-KG 1203
            E+WLGN+KI  +T     P  L +++EDW G    A Y  F V  E++KY+++ + +  G
Sbjct: 252  EFWLGNEKIHLITTQSAIPYVLRVQLEDWSGKTSTADYSTFRVGPESDKYRMTYAYFLGG 311

Query: 1204 TAGNA 1218
             AG+A
Sbjct: 312  DAGDA 316



 Score = 25.4 bits (54), Expect(3) = 7e-29
 Identities = 8/23 (34%), Positives = 17/23 (73%)
 Frame = +2

Query: 1271 HNSMFFSTYNRDNERLENHRSQK 1339
            HN M FST++ DN++ + + +++
Sbjct: 334  HNGMQFSTWDNDNDKFDGNCAEQ 356


>ref|XP_003129181.2| PREDICTED: fibrinogen gamma chain [Sus scrofa].
          Length = 438

 Score = 94.0 bits (232), Expect(3) = 7e-29
 Identities = 55/209 (26%), Positives = 91/209 (43%), Gaps = 1/209 (0%)
 Frame = +2

Query: 353 CLHADPDLGVLCPTGCQLQDTLLKQERPIKTSIEELNXXXXXXXXXXXXTFQYMTLLKRL 532
           C   D   G  CPT C +   L   +  ++  ++ L               + +  ++  
Sbjct: 35  CCILDERFGSYCPTMCGIAGFLSTYQNTVEKDLQNLEGILHQVENKTSEARELIKAIQIS 94

Query: 533 WKDRQKQRRDN-ENVINEFSSELEKHQLYIDETVNSNIPTNLRVLRAILENLRSKIQKLE 709
           +      + D  ++   E    LE+   Y  E + +   + +R L+ I  +   KI  L+
Sbjct: 95  YNPEDLSKPDRIQSATKESKKMLEEIMKY--ENLITTHDSTIRFLQEIYNSNNQKISNLK 152

Query: 710 SDVLAQMEYCRTPCTVTCNIPVVSGKECEEIIRNGGETSEMYLIQPSDSIEPYRVYCDMK 889
             V+     C+ PC  T  I   +GK+C+EI   G   S +Y I+P  + + + VYC++ 
Sbjct: 153 QKVIQLEAKCQEPCKDTVKIHDTTGKDCQEIANKGARESGLYFIKPLKAPKKFLVYCEID 212

Query: 890 TERGGWTVIQNRQDGSVDFGRKWDPYKQG 976
               GWTV Q R DGS DF + W  YK+G
Sbjct: 213 GSGNGWTVFQKRVDGSEDFKKNWIQYKEG 241



 Score = 47.0 bits (110), Expect(3) = 7e-29
 Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
 Frame = +1

Query: 1033 EYWLGNDKISQLTRMG--PTKLLIEMEDWEGGKVKAIYEGFTVQNEANKYQISLSKY-KG 1203
            E+WLGN+KI  +T     P  L +++EDW G    A Y  F V  E++KY+++ + +  G
Sbjct: 252  EFWLGNEKIHLITTQSAIPYVLRVQLEDWSGKTSTADYSTFRVGPESDKYRMTYAYFLGG 311

Query: 1204 TAGNA 1218
             AG+A
Sbjct: 312  DAGDA 316



 Score = 25.4 bits (54), Expect(3) = 7e-29
 Identities = 8/23 (34%), Positives = 17/23 (73%)
 Frame = +2

Query: 1271 HNSMFFSTYNRDNERLENHRSQK 1339
            HN M FST++ DN++ + + +++
Sbjct: 334  HNGMQFSTWDNDNDKFDGNCAEQ 356


>ref|NP_001005152.1| fibroleukin [Sus scrofa].
          Length = 442

 Score = 74.3 bits (181), Expect(3) = 3e-27
 Identities = 49/145 (33%), Positives = 71/145 (48%), Gaps = 5/145 (3%)
 Frame = +2

Query: 557 RDNENVINEFSSELEKHQLYIDETVNSNIPTNLRVLRAILENLRSKIQKLESDVLAQMEY 736
           R+ EN +N+ SS+L+  +  ID         +L  +  I   + +K+  L   V +    
Sbjct: 133 RELENEVNKLSSDLKNAKEEIDGLQGRLEKLSLVNMNNIENYVDNKVANLTFAVNSLDGK 192

Query: 737 CRTPCTVTCNI---PV--VSGKECEEIIRNGGETSEMYLIQPSDSIEPYRVYCDMKTERG 901
           C + C     I   PV  +  K+C E    G  +SE+Y + P      + VYCDM+T  G
Sbjct: 193 CSSRCPSQEQIQSRPVQHLIYKDCSEYYTIGKRSSEIYRVTPDPKNSSFEVYCDMETMGG 252

Query: 902 GWTVIQNRQDGSVDFGRKWDPYKQG 976
           GWTV+Q R DGS +F R W  YK G
Sbjct: 253 GWTVLQARLDGSTNFTRTWRDYKVG 277



 Score = 65.1 bits (157), Expect(3) = 3e-27
 Identities = 31/63 (49%), Positives = 43/63 (68%)
 Frame = +1

Query: 1033 EYWLGNDKISQLTRMGPTKLLIEMEDWEGGKVKAIYEGFTVQNEANKYQISLSKYKGTAG 1212
            E+WLGNDKI  LT+     L I++ED+ G K+ A+Y+ F V NE  KY++ +  Y GTAG
Sbjct: 284  EFWLGNDKIHLLTKSKDMILRIDLEDFNGIKLYALYDHFYVANEFLKYRLHIGNYNGTAG 343

Query: 1213 NAL 1221
            +AL
Sbjct: 344  DAL 346



 Score = 21.6 bits (44), Expect(3) = 3e-27
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +2

Query: 1271 HNSMFFSTYNRDNER 1315
            H+  +F+T +RDN+R
Sbjct: 354  HDMKYFTTPDRDNDR 368


>ref|NP_001136300.1| angiopoietin-related protein 7 [Sus scrofa].
          Length = 344

 Score = 70.1 bits (170), Expect(3) = 2e-24
 Identities = 34/75 (45%), Positives = 47/75 (62%)
 Frame = +1

Query: 1000 QMGKKYCGIPGEYWLGNDKISQLTRMGPTKLLIEMEDWEGGKVKAIYEGFTVQNEANKYQ 1179
            Q  + +  I G++WLGN+ I +L+R  PT+L +EMEDWEG K  A Y  F + NE N Y+
Sbjct: 188  QYKQGFGSIRGDFWLGNEHIHRLSRR-PTRLRVEMEDWEGTKRHAEYSRFALGNELNSYR 246

Query: 1180 ISLSKYKGTAGNALL 1224
            + L  Y G+ GN  L
Sbjct: 247  LFLGNYSGSVGNDAL 261



 Score = 59.7 bits (143), Expect(3) = 2e-24
 Identities = 37/150 (24%), Positives = 74/150 (49%), Gaps = 3/150 (2%)
 Frame = +2

Query: 536 KDRQKQRRDNENVINEFSSELEKHQLYIDETVNSNIPTNLRVLRAILENLRSKIQKLESD 715
           K+ + Q  +  ++++E S + E+  + +   V   + ++ + + + L    SK  ++ + 
Sbjct: 48  KELKAQIANLSSLLSELSQKQERDWVSVVMQV-MELESSSKRMESRLTAAESKFSEMNNQ 106

Query: 716 V-LAQMEYCRTPCTVTCNIPVVSGKECEEIIRNGGETSEMYLIQPSDSI--EPYRVYCDM 886
           + + Q++  +T    + +       +C  + +     S +Y + P D +      V+CDM
Sbjct: 107 IDIMQLQAAQTVTQTSADAIY----DCSSLYQKSYRISGVYKLPPDDFLGSPELEVFCDM 162

Query: 887 KTERGGWTVIQNRQDGSVDFGRKWDPYKQG 976
           +T  GGWT+IQ R+ G V F R W  YKQG
Sbjct: 163 ETSGGGWTIIQRRKSGLVSFYRDWKQYKQG 192



 Score = 21.6 bits (44), Expect(3) = 2e-24
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = +2

Query: 1262 MNIHNSMFFSTYNRDNE 1312
            ++ HN+  FST ++DN+
Sbjct: 261  LSYHNNTAFSTKDKDND 277


>ref|NP_001103417.1| angiopoietin-related protein 1 [Sus scrofa].
          Length = 491

 Score = 67.0 bits (162), Expect(2) = 7e-24
 Identities = 28/64 (43%), Positives = 42/64 (65%)
 Frame = +2

Query: 785 KECEEIIRNGGETSEMYLIQPSDSIEPYRVYCDMKTERGGWTVIQNRQDGSVDFGRKWDP 964
           K+C+     G   S +Y+I+P +S  P +++C+   + GGWTVIQ R DGSV+F R W+ 
Sbjct: 278 KDCQHAKEAGHSVSGIYMIKPENSNGPMQLWCENSLDPGGWTVIQKRTDGSVNFFRNWEN 337

Query: 965 YKQG 976
           YK+G
Sbjct: 338 YKKG 341



 Score = 62.4 bits (150), Expect(2) = 7e-24
 Identities = 29/72 (40%), Positives = 43/72 (59%)
 Frame = +1

Query: 1009 KKYCGIPGEYWLGNDKISQLTRMGPTKLLIEMEDWEGGKVKAIYEGFTVQNEANKYQISL 1188
            K +    GEYWLG + I  L+     KLLIE+EDW   KV A Y  F ++ E+  Y++ L
Sbjct: 340  KGFGNTDGEYWLGLENIYMLSNQDNYKLLIELEDWSDKKVYAEYSSFRLEPESEFYRLRL 399

Query: 1189 SKYKGTAGNALL 1224
              Y+G AG++++
Sbjct: 400  GTYQGNAGDSMM 411


>ref|NP_999124.1| angiopoietin-1 precursor [Sus scrofa].
          Length = 498

 Score = 66.2 bits (160), Expect(2) = 8e-22
 Identities = 28/64 (43%), Positives = 42/64 (65%)
 Frame = +2

Query: 785 KECEEIIRNGGETSEMYLIQPSDSIEPYRVYCDMKTERGGWTVIQNRQDGSVDFGRKWDP 964
           ++C ++ + G   S +Y I  ++  EP +V+C+M    GGWTVIQ+R+DGS+DF R W  
Sbjct: 284 RDCADVYQAGFNKSGIYTIYINNMPEPKKVFCNMDLNGGGWTVIQHREDGSLDFQRGWKE 343

Query: 965 YKQG 976
           YK G
Sbjct: 344 YKMG 347



 Score = 56.2 bits (134), Expect(2) = 8e-22
 Identities = 28/71 (39%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
 Frame = +1

Query: 1030 GEYWLGNDKISQLTRMGPTKLLIEMEDWEGGKVKAIYEGFTVQNEANKYQISLSKYKGTA 1209
            GEYWLGN+ I  +T      L  E+ DWEG +  + Y+ F + NE   Y++ L  + GTA
Sbjct: 353  GEYWLGNEFIFAITSQRQYTLRTELMDWEGNRAYSQYDRFHIGNEKQNYRLYLKGHSGTA 412

Query: 1210 G---NALLEGA 1233
            G   + +L GA
Sbjct: 413  GKQSSLILHGA 423


>ref|XP_003122287.1| PREDICTED: fibrinogen C domain-containing protein 1 [Sus scrofa].
          Length = 461

 Score = 68.9 bits (167), Expect(3) = 2e-21
 Identities = 27/67 (40%), Positives = 44/67 (65%)
 Frame = +2

Query: 785 KECEEIIRNGGETSEMYLIQPSDSIEPYRVYCDMKTERGGWTVIQNRQDGSVDFGRKWDP 964
           ++C +++ +G +   +Y + P+     ++VYCDM T+ GGWTV Q R+DGSV+F R W+ 
Sbjct: 242 RDCLDVLLSGQQEDGVYSVFPTHDPAGFQVYCDMSTDGGGWTVFQRREDGSVNFFRGWEA 301

Query: 965 YKQGIWK 985
           Y+ G  K
Sbjct: 302 YRDGFGK 308



 Score = 49.7 bits (117), Expect(3) = 2e-21
 Identities = 24/73 (32%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
 Frame = +1

Query: 1024 IPGEYWLGNDKISQLTRMGPTKLLIEMEDWEGGKVKAIYEG-----FTVQNEANKYQISL 1188
            + GE+WLG  ++  LT     +L +++ED++ G   A Y       F+V  E + Y +++
Sbjct: 309  LTGEHWLGLKRLHALTTQAAYELHVDLEDFDNGTAYAHYRSFGVGLFSVDPEEDGYPLTV 368

Query: 1189 SKYKGTAGNALLE 1227
            + Y GTAG++LL+
Sbjct: 369  ADYSGTAGDSLLK 381



 Score = 22.3 bits (46), Expect(3) = 2e-21
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +2

Query: 1271 HNSMFFSTYNRDNERLENH 1327
            H+ M F+T +RD++  EN+
Sbjct: 382  HSGMRFTTKDRDSDHSENN 400


  Database: RefSeq49_SP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 11,343,932
  Number of sequences in database:  24,897
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 33,244,081
Number of extensions: 879148
Number of successful extensions: 2638
Number of sequences better than 1.0e-05: 27
Number of HSP's gapped: 2622
Number of HSP's successfully gapped: 74
Length of query: 454
Length of database: 11,343,932
Length adjustment: 102
Effective length of query: 352
Effective length of database: 8,804,438
Effective search space: 3099162176
Effective search space used: 3099162176
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

Search to Sscrofa10_2

BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-007023
         (1363 letters)

Database: Sscrofa_10.2.fasta 
           4582 sequences; 2,808,509,378 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Sscrofa_Chr08                                                         521   e-145

>Sscrofa_Chr08 
||          Length = 148491826

 Score =  521 bits (263), Expect = e-145
 Identities = 279/283 (98%), Gaps = 1/283 (0%)
 Strand = Plus / Minus

                                                                            
Query: 1029     aggtgagtattggcttggaaatgataaaattagccagcttaccaggatgggacccacaaa 1088
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78954490 aggtgagtattggcttggaaatgataaaattagccagcttaccaggatgggacccacaaa 78954431

                                                                            
Query: 1089     gcttttgatcgaaatggaggactgggaaggaggcaaggtgaaggcaatctacgaaggatt 1148
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78954430 gcttttgatcgaaatggaggactgggaaggaggcaaggtgaaggcaatctacgaaggatt 78954371

                                                                            
Query: 1149     cactgtgcagaacgaagccaataaataccagatctcgctgagcaaatacaagggaacagc 1208
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78954370 cactgtgcagaacgaagccaataaataccagatctcgctgagcaaatacaagggaacagc 78954311

                                                                            
Query: 1209     tggcaacgccctcttggaaggagcctctcaactggtgggagaaaacccgaaccatgaaca 1268
                ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  |
Sbjct: 78954310 tggcaacgccctcttggaaggagcctctcaactggtgggagaaaa-ccgaaccatgacaa 78954252

                                                           
Query: 1269     tccacaacagcatgttcttcagcacctacaacagagacaacga 1311
                ||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 78954251 tccacaacagcatgttcttcagcacctacgacagagacaacga 78954209



 Score =  521 bits (263), Expect = e-145
 Identities = 279/283 (98%), Gaps = 1/283 (0%)
 Strand = Plus / Minus

                                                                            
Query: 1029     aggtgagtattggcttggaaatgataaaattagccagcttaccaggatgggacccacaaa 1088
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79086282 aggtgagtattggcttggaaatgataaaattagccagcttaccaggatgggacccacaaa 79086223

                                                                            
Query: 1089     gcttttgatcgaaatggaggactgggaaggaggcaaggtgaaggcaatctacgaaggatt 1148
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79086222 gcttttgatcgaaatggaggactgggaaggaggcaaggtgaaggcaatctacgaaggatt 79086163

                                                                            
Query: 1149     cactgtgcagaacgaagccaataaataccagatctcgctgagcaaatacaagggaacagc 1208
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79086162 cactgtgcagaacgaagccaataaataccagatctcgctgagcaaatacaagggaacagc 79086103

                                                                            
Query: 1209     tggcaacgccctcttggaaggagcctctcaactggtgggagaaaacccgaaccatgaaca 1268
                ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  |
Sbjct: 79086102 tggcaacgccctcttggaaggagcctctcaactggtgggagaaaa-ccgaaccatgacaa 79086044

                                                           
Query: 1269     tccacaacagcatgttcttcagcacctacaacagagacaacga 1311
                ||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 79086043 tccacaacagcatgttcttcagcacctacgacagagacaacga 79086001



 Score =  456 bits (230), Expect = e-125
 Identities = 230/230 (100%)
 Strand = Plus / Minus

                                                                            
Query: 559      agataatgaaaatgtcataaatgagttctcgtccgagctggaaaagcaccagctctatat 618
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78956303 agataatgaaaatgtcataaatgagttctcgtccgagctggaaaagcaccagctctatat 78956244

                                                                            
Query: 619      agatgaaactgtgaacagcaacatccccactaacttgcgtgtgctccgtgccatcctgga 678
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78956243 agatgaaactgtgaacagcaacatccccactaacttgcgtgtgctccgtgccatcctgga 78956184

                                                                            
Query: 679      aaacttgagaagcaaaatacagaaattagaatcggatgtcttggctcagatggaatactg 738
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78956183 aaacttgagaagcaaaatacagaaattagaatcggatgtcttggctcagatggaatactg 78956124

                                                                  
Query: 739      ccgtactccatgtaccgtcacttgcaatattcctgtggtgtctggcaaag 788
                ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78956123 ccgtactccatgtaccgtcacttgcaatattcctgtggtgtctggcaaag 78956074



 Score =  456 bits (230), Expect = e-125
 Identities = 230/230 (100%)
 Strand = Plus / Minus

                                                                            
Query: 559      agataatgaaaatgtcataaatgagttctcgtccgagctggaaaagcaccagctctatat 618
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79088095 agataatgaaaatgtcataaatgagttctcgtccgagctggaaaagcaccagctctatat 79088036

                                                                            
Query: 619      agatgaaactgtgaacagcaacatccccactaacttgcgtgtgctccgtgccatcctgga 678
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79088035 agatgaaactgtgaacagcaacatccccactaacttgcgtgtgctccgtgccatcctgga 79087976

                                                                            
Query: 679      aaacttgagaagcaaaatacagaaattagaatcggatgtcttggctcagatggaatactg 738
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79087975 aaacttgagaagcaaaatacagaaattagaatcggatgtcttggctcagatggaatactg 79087916

                                                                  
Query: 739      ccgtactccatgtaccgtcacttgcaatattcctgtggtgtctggcaaag 788
                ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79087915 ccgtactccatgtaccgtcacttgcaatattcctgtggtgtctggcaaag 79087866



 Score =  389 bits (196), Expect = e-105
 Identities = 196/196 (100%)
 Strand = Plus / Minus

                                                                            
Query: 182      aaggttcatgtggatgcccgtggtcatcggccctatgacaagaggagggaagaggctccc 241
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78958958 aaggttcatgtggatgcccgtggtcatcggccctatgacaagaggagggaagaggctccc 78958899

                                                                            
Query: 242      agcctgagacctgtcgcccctcccatcagtgcaggtggctatcaacctcgtccagccaaa 301
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78958898 agcctgagacctgtcgcccctcccatcagtgcaggtggctatcaacctcgtccagccaaa 78958839

                                                                            
Query: 302      gtagctattggccagaagaaagtggagagaaaaccccctgatgctgggggctgcctgcat 361
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78958838 gtagctattggccagaagaaagtggagagaaaaccccctgatgctgggggctgcctgcat 78958779

                                
Query: 362      gctgatccggacctgg 377
                ||||||||||||||||
Sbjct: 78958778 gctgatccggacctgg 78958763



 Score =  373 bits (188), Expect = e-100
 Identities = 195/196 (99%), Gaps = 1/196 (0%)
 Strand = Plus / Minus

                                                                            
Query: 182      aaggttcatgtggatgcccgtggtcatcggccctatgacaagaggagggaagaggctccc 241
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79090749 aaggttcatgtggatgcccgtggtcatcggccctatgacaagaggagggaagaggctccc 79090690

                                                                            
Query: 242      agcctgagacctgtcgcccctcccatcagtgcaggtggctatcaacctcgtccagccaaa 301
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79090689 agcctgagacctgtcgcccctcccatcagtgcaggtggctatcaacctcgtccagccaaa 79090630

                                                                            
Query: 302      gtagctattggccagaagaaagtggagagaaaaccccctgatgctgggggctgcctgcat 361
                ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 79090629 gtagctattggccagaagaaagtggagagaaaaccccctgatgct-ggggctgcctgcat 79090571

                                
Query: 362      gctgatccggacctgg 377
                ||||||||||||||||
Sbjct: 79090570 gctgatccggacctgg 79090555



 Score =  367 bits (185), Expect = 1e-98
 Identities = 185/185 (100%)
 Strand = Plus / Minus

                                                                            
Query: 376      gggtgtgttgtgtcctacaggatgtcagttgcaagatactctgctgaaacaggaaagacc 435
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78958019 gggtgtgttgtgtcctacaggatgtcagttgcaagatactctgctgaaacaggaaagacc 78957960

                                                                            
Query: 436      aatcaaaaccagtatagaagagctgaatagtaacatagactctgtttcccagtcctcttc 495
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78957959 aatcaaaaccagtatagaagagctgaatagtaacatagactctgtttcccagtcctcttc 78957900

                                                                            
Query: 496      ttccacctttcagtacatgactctgctgaaacgcctgtggaaagacaggcagaagcaaag 555
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78957899 ttccacctttcagtacatgactctgctgaaacgcctgtggaaagacaggcagaagcaaag 78957840

                     
Query: 556      aagag 560
                |||||
Sbjct: 78957839 aagag 78957835



 Score =  367 bits (185), Expect = 1e-98
 Identities = 185/185 (100%)
 Strand = Plus / Minus

                                                                            
Query: 376      gggtgtgttgtgtcctacaggatgtcagttgcaagatactctgctgaaacaggaaagacc 435
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79089811 gggtgtgttgtgtcctacaggatgtcagttgcaagatactctgctgaaacaggaaagacc 79089752

                                                                            
Query: 436      aatcaaaaccagtatagaagagctgaatagtaacatagactctgtttcccagtcctcttc 495
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79089751 aatcaaaaccagtatagaagagctgaatagtaacatagactctgtttcccagtcctcttc 79089692

                                                                            
Query: 496      ttccacctttcagtacatgactctgctgaaacgcctgtggaaagacaggcagaagcaaag 555
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79089691 ttccacctttcagtacatgactctgctgaaacgcctgtggaaagacaggcagaagcaaag 79089632

                     
Query: 556      aagag 560
                |||||
Sbjct: 79089631 aagag 79089627



 Score =  325 bits (164), Expect = 4e-86
 Identities = 164/164 (100%)
 Strand = Plus / Minus

                                                                            
Query: 1        cagaggcttcgggcatatataagactgaagatctctcagttaagaccacaagcaaaggat 60
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78961936 cagaggcttcgggcatatataagactgaagatctctcagttaagaccacaagcaaaggat 78961877

                                                                            
Query: 61       ggtttcttgggacttccaaaaacttaaaatcatgaaacctctattactgctactattgtg 120
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78961876 ggtttcttgggacttccaaaaacttaaaatcatgaaacctctattactgctactattgtg 78961817

                                                            
Query: 121      tgtttttataattaaggcccaagctgccattgactacgatgagg 164
                ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78961816 tgtttttataattaaggcccaagctgccattgactacgatgagg 78961773



 Score =  325 bits (164), Expect = 4e-86
 Identities = 164/164 (100%)
 Strand = Plus / Minus

                                                                            
Query: 1        cagaggcttcgggcatatataagactgaagatctctcagttaagaccacaagcaaaggat 60
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79093727 cagaggcttcgggcatatataagactgaagatctctcagttaagaccacaagcaaaggat 79093668

                                                                            
Query: 61       ggtttcttgggacttccaaaaacttaaaatcatgaaacctctattactgctactattgtg 120
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79093667 ggtttcttgggacttccaaaaacttaaaatcatgaaacctctattactgctactattgtg 79093608

                                                            
Query: 121      tgtttttataattaaggcccaagctgccattgactacgatgagg 164
                ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79093607 tgtttttataattaaggcccaagctgccattgactacgatgagg 79093564



 Score =  232 bits (117), Expect = 4e-58
 Identities = 117/117 (100%)
 Strand = Plus / Minus

                                                                            
Query: 787      agaatgtgaggaaattatcaggaatggaggcgaaacatctgaaatgtatctcattcagcc 846
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78955528 agaatgtgaggaaattatcaggaatggaggcgaaacatctgaaatgtatctcattcagcc 78955469

                                                                         
Query: 847      tagtgattccatcgaaccctatagagtgtactgtgatatgaagacagaaagaggagg 903
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78955468 tagtgattccatcgaaccctatagagtgtactgtgatatgaagacagaaagaggagg 78955412



 Score =  232 bits (117), Expect = 4e-58
 Identities = 117/117 (100%)
 Strand = Plus / Minus

                                                                            
Query: 787      agaatgtgaggaaattatcaggaatggaggcgaaacatctgaaatgtatctcattcagcc 846
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79087320 agaatgtgaggaaattatcaggaatggaggcgaaacatctgaaatgtatctcattcagcc 79087261

                                                                         
Query: 847      tagtgattccatcgaaccctatagagtgtactgtgatatgaagacagaaagaggagg 903
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79087260 tagtgattccatcgaaccctatagagtgtactgtgatatgaagacagaaagaggagg 79087204



 Score =  188 bits (95), Expect = 5e-45
 Identities = 105/107 (98%), Gaps = 1/107 (0%)
 Strand = Plus / Minus

                                                                            
Query: 901      aggatggacagtaattcagaaccgtcaagacggtagtgttgactttggcaggaaatggga 960
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78954832 aggatggacagtaattcagaaccgtcaagacggtagtgttgactttggcaggaaatggga 78954773

                                                               
Query: 961      tccatataagcaaggaatttggaaatattgcaaccagtgcaaatggg 1007
                ||||||||||||||| ||||||||||||||||||||||||| |||||
Sbjct: 78954772 tccatataagcaagg-atttggaaatattgcaaccagtgcagatggg 78954727



 Score =  188 bits (95), Expect = 5e-45
 Identities = 105/107 (98%), Gaps = 1/107 (0%)
 Strand = Plus / Minus

                                                                            
Query: 901      aggatggacagtaattcagaaccgtcaagacggtagtgttgactttggcaggaaatggga 960
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79086624 aggatggacagtaattcagaaccgtcaagacggtagtgttgactttggcaggaaatggga 79086565

                                                               
Query: 961      tccatataagcaaggaatttggaaatattgcaaccagtgcaaatggg 1007
                ||||||||||||||| ||||||||||||||||||||||||| |||||
Sbjct: 79086564 tccatataagcaagg-atttggaaatattgcaaccagtgcagatggg 79086519



 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 43/46 (93%), Gaps = 1/46 (2%)
 Strand = Plus / Minus

                                                              
Query: 1318     ggaaaaccacagatcccagaaagcagtgttcctaaaaaggatggtg 1363
                ||||||| |||||||||||||||||||||| ||||| |||||||||
Sbjct: 78953372 ggaaaacgacagatcccagaaagcagtgtt-ctaaagaggatggtg 78953328



 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 43/46 (93%), Gaps = 1/46 (2%)
 Strand = Plus / Minus

                                                              
Query: 1318     ggaaaaccacagatcccagaaagcagtgttcctaaaaaggatggtg 1363
                ||||||| |||||||||||||||||||||| ||||| |||||||||
Sbjct: 79085163 ggaaaacgacagatcccagaaagcagtgtt-ctaaagaggatggtg 79085119


  Database: Sscrofa_10.2.fasta
    Posted date:  Nov 16, 2011 10:34 AM
  Number of letters in database: 2,808,509,378
  Number of sequences in database:  4582
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 43,155,778
Number of extensions: 285
Number of successful extensions: 285
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 280
Number of HSP's successfully gapped: 16
Length of query: 1363
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1342
Effective length of database: 2,808,413,156
Effective search space: 3768890455352
Effective search space used: 3768890455352
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)