Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007076
(1680 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001029801.1| epoxide hydrolase 1 [Bos taurus]. 763 0.0
>ref|NP_001029801.1| epoxide hydrolase 1 [Bos taurus].
Length = 451
Score = 763 bits (1971), Expect = 0.0
Identities = 367/444 (82%), Positives = 392/444 (88%)
Frame = +3
Query: 333 MWLEILLASVLGFVIYWFVSKDKEETLLLGDGWWGPGSRPAAAEDESIRPFKVETSDEEI 512
MWLEILLASVLGFVIYWFVSKDKEETL L DGWWGPG RP A ED+SIRPFKVETSDEEI
Sbjct: 1 MWLEILLASVLGFVIYWFVSKDKEETLPLEDGWWGPGVRPTAGEDKSIRPFKVETSDEEI 60
Query: 513 NDLHQRIEKFRLTPPLEDSRFHYGFNSNYLKKIISYWRNTFDWRKQVEVLNKYPHFKTKI 692
NDLHQRI++ RLTPPLEDSRFHYGFNSNYLKKIISYWRN FDWRKQVE+LNKYPHFKTKI
Sbjct: 61 NDLHQRIDRVRLTPPLEDSRFHYGFNSNYLKKIISYWRNEFDWRKQVEILNKYPHFKTKI 120
Query: 693 EGLDIHFIHVKPPQLPSGRTAKPLLMVHGWPGCFYEFYKIIPLLTDPKNHGLSDEHVFEV 872
EGLDIHFIHVKPP LPSG+T KPLLMVHGWPG FYEFYKIIP LTDPKNHGLSDEHVFEV
Sbjct: 121 EGLDIHFIHVKPPNLPSGQTPKPLLMVHGWPGSFYEFYKIIPFLTDPKNHGLSDEHVFEV 180
Query: 873 ICPSIPGYGFSEASSKKGFNSVATARIFYKLMLRLGFQEFYLQGGDWGALICTNMAQLVP 1052
ICPSIPGY FSEASSKKGFNSVATARIFYKLMLRLGFQ+FY+QGGDWGALICTNMAQLVP
Sbjct: 181 ICPSIPGYSFSEASSKKGFNSVATARIFYKLMLRLGFQKFYIQGGDWGALICTNMAQLVP 240
Query: 1053 SHVKGLHLNVALVLRNVYTLTXXXXXXXXXXXXYTERDLELLYPFQKTFYTLMRESGYMH 1232
SH+KGLHLN+AL+LRN YTLT YTERD+EL+YPF+K F++L+RESGY+H
Sbjct: 241 SHIKGLHLNMALILRNFYTLTLPLGRCFGGLFGYTERDMELIYPFKKIFFSLLRESGYLH 300
Query: 1233 IQSTKPDTVGCALNDSPVGLAAYILEKFSTWTNEEFRDLEDGGLERKFSLDELLTVIMLY 1412
IQSTKPDTVGCALNDSPVGLAAYILEKFSTWTN EFRDLEDGGLERKFSLD+LLT IMLY
Sbjct: 301 IQSTKPDTVGCALNDSPVGLAAYILEKFSTWTNSEFRDLEDGGLERKFSLDDLLTGIMLY 360
Query: 1413 WTTGTITSSQRFYKENLXQGVMAK*HEAIKVHVPHGLAGFPSPRCTLPRKVGEEQYPKLI 1592
WTTGTITSSQRFYKENL Q HE +KV+VP G A FP LP K + +YP LI
Sbjct: 361 WTTGTITSSQRFYKENLGQ---VNKHEMLKVYVPTGFAAFPCELMHLPEKWVKTKYPNLI 417
Query: 1593 SYSYMAGGDHFAAFEDPELLAKNI 1664
SYSYM G HFAAFE+PELLA++I
Sbjct: 418 SYSYMPRGGHFAAFEEPELLAQDI 441
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 63,003,575
Number of extensions: 1862672
Number of successful extensions: 7101
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 7071
Number of HSP's successfully gapped: 1
Length of query: 560
Length of database: 17,681,374
Length adjustment: 107
Effective length of query: 453
Effective length of database: 14,140,958
Effective search space: 6405853974
Effective search space used: 6405853974
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007076
(1680 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_537235.2| PREDICTED: similar to Epoxide hydrolase 1 (Micr... 745 0.0
Alignment gi|XP_863972.1| PREDICTED: similar to Epoxide hydrolase 1 (Micr... 717 0.0
Alignment gi|XP_863989.1| PREDICTED: similar to epoxide hydrolase 1 isofo... 660 0.0
>ref|XP_537235.2| PREDICTED: similar to Epoxide hydrolase 1 (Microsomal epoxide
hydrolase) (Epoxide hydratase) isoform 1 [Canis
familiaris].
Length = 454
Score = 745 bits (1923), Expect = 0.0
Identities = 357/445 (80%), Positives = 389/445 (87%), Gaps = 1/445 (0%)
Frame = +3
Query: 333 MWLEILLASVLGFVIYWFVSKDKEETLLLGDGWWGPGSRPAAAEDESIRPFKVETSDEEI 512
MWLEI+LA +LGFVIYWFVS+DKEETL LGDGWWGPG+RP A EDES+RPFKVETS+EEI
Sbjct: 1 MWLEIILALLLGFVIYWFVSRDKEETLPLGDGWWGPGARPTATEDESVRPFKVETSEEEI 60
Query: 513 NDLHQRIEKFRLTPPLEDSRFHYGFNSNYLKKIISYWRNTFDWRKQVEVLNKYPHFKTKI 692
DLHQRI++ RLTPPLED RFHYGFNS YLKKI+SYWRN FDWRKQVE+LN+YPHFKTKI
Sbjct: 61 EDLHQRIDRVRLTPPLEDGRFHYGFNSKYLKKILSYWRNEFDWRKQVEILNRYPHFKTKI 120
Query: 693 EGLDIHFIHVKPPQLPSGRTAKPLLMVHGWPGCFYEFYKIIPLLTDPKNHGLSDEHVFEV 872
EGLDIHFIHVKPPQLPS T KPLLMVHGWPG FYEFYKIIPLLTDPKNHGLSDEHVFEV
Sbjct: 121 EGLDIHFIHVKPPQLPSSSTPKPLLMVHGWPGSFYEFYKIIPLLTDPKNHGLSDEHVFEV 180
Query: 873 ICPSIPGYGFSEASSKKGFNSVATARIFYKLMLRLGFQEFYLQGGDWGALICTNMAQLVP 1052
ICPSIPGY FSEASSKKG NSVATARIFYKLMLRLGFQEFY+QGGDWG+LICTNMAQ+VP
Sbjct: 181 ICPSIPGYSFSEASSKKGLNSVATARIFYKLMLRLGFQEFYIQGGDWGSLICTNMAQMVP 240
Query: 1053 SHVKGLHLNVALVLRNVYTLTXXXXXXXXXXXXYTERDLELLYPF-QKTFYTLMRESGYM 1229
SHVKGLHLN+AL+L Y LT YT+RDLELLYPF +K FY+LMRESGYM
Sbjct: 241 SHVKGLHLNMALIL-GPYILTLLLGRRILSLLGYTQRDLELLYPFKEKVFYSLMRESGYM 299
Query: 1230 HIQSTKPDTVGCALNDSPVGLAAYILEKFSTWTNEEFRDLEDGGLERKFSLDELLTVIML 1409
HIQ TKPDTVGCALNDSPVGLAAYILEKFSTWTN EFRDLE+GGL+RKFSLD+LLT +ML
Sbjct: 300 HIQCTKPDTVGCALNDSPVGLAAYILEKFSTWTNPEFRDLENGGLDRKFSLDDLLTNVML 359
Query: 1410 YWTTGTITSSQRFYKENLXQGVMAK*HEAIKVHVPHGLAGFPSPRCTLPRKVGEEQYPKL 1589
YWTTGTI SSQRFYKENL QG MA H+ +KV+VP G A FP +P K + +YPKL
Sbjct: 360 YWTTGTIASSQRFYKENLGQGFMANAHDRMKVYVPTGFAAFPCELMHVPEKWVKAKYPKL 419
Query: 1590 ISYSYMAGGDHFAAFEDPELLAKNI 1664
ISYSYMA G HFAAFE+PELLA++I
Sbjct: 420 ISYSYMARGGHFAAFEEPELLAQDI 444
>ref|XP_863972.1| PREDICTED: similar to Epoxide hydrolase 1 (Microsomal epoxide
hydrolase) (Epoxide hydratase) isoform 2 [Canis
familiaris].
Length = 441
Score = 717 bits (1850), Expect = 0.0
Identities = 346/445 (77%), Positives = 376/445 (84%), Gaps = 1/445 (0%)
Frame = +3
Query: 333 MWLEILLASVLGFVIYWFVSKDKEETLLLGDGWWGPGSRPAAAEDESIRPFKVETSDEEI 512
MWLEI+LA +LGFVIYWFVS+DKEETL LGDGWWGPG+RP A EDES+RPFKVETS+EEI
Sbjct: 1 MWLEIILALLLGFVIYWFVSRDKEETLPLGDGWWGPGARPTATEDESVRPFKVETSEEEI 60
Query: 513 NDLHQRIEKFRLTPPLEDSRFHYGFNSNYLKKIISYWRNTFDWRKQVEVLNKYPHFKTKI 692
DLHQRI++ RLTPPLED RFHYGFNS YLKKI+SYWRN FDWRKQVE+LN+YPHFKTKI
Sbjct: 61 EDLHQRIDRVRLTPPLEDGRFHYGFNSKYLKKILSYWRNEFDWRKQVEILNRYPHFKTKI 120
Query: 693 EGLDIHFIHVKPPQLPSGRTAKPLLMVHGWPGCFYEFYKIIPLLTDPKNHGLSDEHVFEV 872
EGLDIHFIHVKPPQLPS T KPLLMVHGWPG FYEFYKIIPLLTDPKNHGLSDEHVFEV
Sbjct: 121 EGLDIHFIHVKPPQLPSSSTPKPLLMVHGWPGSFYEFYKIIPLLTDPKNHGLSDEHVFEV 180
Query: 873 ICPSIPGYGFSEASSKKGFNSVATARIFYKLMLRLGFQEFYLQGGDWGALICTNMAQLVP 1052
ICPSIPGY FSEASSKKG NSVATARIFYKLMLRLGFQEFY+QGGDWG+LICTNMAQ+VP
Sbjct: 181 ICPSIPGYSFSEASSKKGLNSVATARIFYKLMLRLGFQEFYIQGGDWGSLICTNMAQMVP 240
Query: 1053 SHVKGLHLNVALVLRNVYTLTXXXXXXXXXXXXYTERDLELLYPF-QKTFYTLMRESGYM 1229
R Y LT YT+RDLELLYPF +K FY+LMRESGYM
Sbjct: 241 --------------RRPYILTLLLGRRILSLLGYTQRDLELLYPFKEKVFYSLMRESGYM 286
Query: 1230 HIQSTKPDTVGCALNDSPVGLAAYILEKFSTWTNEEFRDLEDGGLERKFSLDELLTVIML 1409
HIQ TKPDTVGCALNDSPVGLAAYILEKFSTWTN EFRDLE+GGL+RKFSLD+LLT +ML
Sbjct: 287 HIQCTKPDTVGCALNDSPVGLAAYILEKFSTWTNPEFRDLENGGLDRKFSLDDLLTNVML 346
Query: 1410 YWTTGTITSSQRFYKENLXQGVMAK*HEAIKVHVPHGLAGFPSPRCTLPRKVGEEQYPKL 1589
YWTTGTI SSQRFYKENL QG MA H+ +KV+VP G A FP +P K + +YPKL
Sbjct: 347 YWTTGTIASSQRFYKENLGQGFMANAHDRMKVYVPTGFAAFPCELMHVPEKWVKAKYPKL 406
Query: 1590 ISYSYMAGGDHFAAFEDPELLAKNI 1664
ISYSYMA G HFAAFE+PELLA++I
Sbjct: 407 ISYSYMARGGHFAAFEEPELLAQDI 431
>ref|XP_863989.1| PREDICTED: similar to epoxide hydrolase 1 isoform 3 [Canis
familiaris].
Length = 412
Score = 660 bits (1704), Expect = 0.0
Identities = 325/445 (73%), Positives = 354/445 (79%), Gaps = 1/445 (0%)
Frame = +3
Query: 333 MWLEILLASVLGFVIYWFVSKDKEETLLLGDGWWGPGSRPAAAEDESIRPFKVETSDEEI 512
MWLEI+LA +LGFVIYWFVS+DKEETL LGDGWWGPG+RP A EDES+RPFKVETS+EEI
Sbjct: 1 MWLEIILALLLGFVIYWFVSRDKEETLPLGDGWWGPGARPTATEDESVRPFKVETSEEEI 60
Query: 513 NDLHQRIEKFRLTPPLEDSRFHYGFNSNYLKKIISYWRNTFDWRKQVEVLNKYPHFKTKI 692
DLHQRI++ RLTPPLED RFHYGFNS YLKKI+SYWRN FDWRKQVE+LN+YPHFKTKI
Sbjct: 61 EDLHQRIDRVRLTPPLEDGRFHYGFNSKYLKKILSYWRNEFDWRKQVEILNRYPHFKTKI 120
Query: 693 EGLDIHFIHVKPPQLPSGRTAKPLLMVHGWPGCFYEFYKIIPLLTDPKNHGLSDEHVFEV 872
EGLDIHFIHVKPPQLPS T KPLLMVHGWPG FYEFYKIIPLLTDPKNHGLSDEHVFEV
Sbjct: 121 EGLDIHFIHVKPPQLPSSSTPKPLLMVHGWPGSFYEFYKIIPLLTDPKNHGLSDEHVFEV 180
Query: 873 ICPSIPGYGFSEASSKKGFNSVATARIFYKLMLRLGFQEFYLQGGDWGALICTNMAQLVP 1052
ICPSIPGY FSEASSKKG NSVATARIFYKLMLRLGFQEFY+QGGDWG+LICTNMAQ+VP
Sbjct: 181 ICPSIPGYSFSEASSKKGLNSVATARIFYKLMLRLGFQEFYIQGGDWGSLICTNMAQMVP 240
Query: 1053 SHVKGLHLNVALVLRNVYTLTXXXXXXXXXXXXYTERDLELLYPF-QKTFYTLMRESGYM 1229
SHVKGLHLN+AL+L Y LT YT+RDLELLYPF +K FY+LMRESGYM
Sbjct: 241 SHVKGLHLNMALIL-GPYILTLLLGRRILSLLGYTQRDLELLYPFKEKVFYSLMRESGYM 299
Query: 1230 HIQSTKPDTVGCALNDSPVGLAAYILEKFSTWTNEEFRDLEDGGLERKFSLDELLTVIML 1409
HIQ TKPDTVGCALNDSPVGLAAYILEKFSTWTN EFRDLE+GGL+R
Sbjct: 300 HIQCTKPDTVGCALNDSPVGLAAYILEKFSTWTNPEFRDLENGGLDR------------- 346
Query: 1410 YWTTGTITSSQRFYKENLXQGVMAK*HEAIKVHVPHGLAGFPSPRCTLPRKVGEEQYPKL 1589
+KV+VP G A FP +P K + +YPKL
Sbjct: 347 -----------------------------MKVYVPTGFAAFPCELMHVPEKWVKAKYPKL 377
Query: 1590 ISYSYMAGGDHFAAFEDPELLAKNI 1664
ISYSYMA G HFAAFE+PELLA++I
Sbjct: 378 ISYSYMARGGHFAAFEEPELLAQDI 402
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 65,427,633
Number of extensions: 1836135
Number of successful extensions: 7507
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 7475
Number of HSP's successfully gapped: 4
Length of query: 560
Length of database: 18,874,504
Length adjustment: 108
Effective length of query: 452
Effective length of database: 15,274,216
Effective search space: 6903945632
Effective search space used: 6903945632
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007076
(1680 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_000111.1| epoxide hydrolase 1 [Homo sapiens]. 741 0.0
Alignment gi|NP_001129490.1| epoxide hydrolase 1 [Homo sapiens]. 741 0.0
>ref|NP_000111.1| epoxide hydrolase 1 [Homo sapiens].
Length = 455
Score = 741 bits (1913), Expect = 0.0
Identities = 359/445 (80%), Positives = 386/445 (86%), Gaps = 1/445 (0%)
Frame = +3
Query: 333 MWLEILLASVLGFVIYWFVSKDKEETLLLGDGWWGPGSRPAAAEDESIRPFKVETSDEEI 512
MWLEILL SVLGF IYWF+S+DKEETL L DGWWGPG+R AA ED+SIRPFKVETSDEEI
Sbjct: 1 MWLEILLTSVLGFAIYWFISRDKEETLPLEDGWWGPGTRSAAREDDSIRPFKVETSDEEI 60
Query: 513 NDLHQRIEKFRLTPPLEDSRFHYGFNSNYLKKIISYWRNTFDWRKQVEVLNKYPHFKTKI 692
+DLHQRI+KFR TPPLEDS FHYGFNSNYLKK+ISYWRN FDW+KQVE+LN+YPHFKTKI
Sbjct: 61 HDLHQRIDKFRFTPPLEDSCFHYGFNSNYLKKVISYWRNEFDWKKQVEILNRYPHFKTKI 120
Query: 693 EGLDIHFIHVKPPQLPSGRTAKPLLMVHGWPGCFYEFYKIIPLLTDPKNHGLSDEHVFEV 872
EGLDIHFIHVKPPQLP+G T KPLLMVHGWPG FYEFYKIIPLLTDPKNHGLSDEHVFEV
Sbjct: 121 EGLDIHFIHVKPPQLPAGHTPKPLLMVHGWPGSFYEFYKIIPLLTDPKNHGLSDEHVFEV 180
Query: 873 ICPSIPGYGFSEASSKKGFNSVATARIFYKLMLRLGFQEFYLQGGDWGALICTNMAQLVP 1052
ICPSIPGYGFSEASSKKGFNSVATARIFYKLMLRLGFQEFY+QGGDWG+LICTNMAQLVP
Sbjct: 181 ICPSIPGYGFSEASSKKGFNSVATARIFYKLMLRLGFQEFYIQGGDWGSLICTNMAQLVP 240
Query: 1053 SHVKGLHLNVALVLRNVYTLTXXXXXXXXXXXXYTERDLELLYPF-QKTFYTLMRESGYM 1229
SHVKGLHLN+ALVL N TLT TERD+ELLYP +K FY+LMRESGYM
Sbjct: 241 SHVKGLHLNMALVLSNFSTLTLLLGQRFGRFLGLTERDVELLYPVKEKVFYSLMRESGYM 300
Query: 1230 HIQSTKPDTVGCALNDSPVGLAAYILEKFSTWTNEEFRDLEDGGLERKFSLDELLTVIML 1409
HIQ TKPDTVG ALNDSPVGLAAYILEKFSTWTN EFR LEDGGLERKFSLD+LLT +ML
Sbjct: 301 HIQCTKPDTVGSALNDSPVGLAAYILEKFSTWTNTEFRYLEDGGLERKFSLDDLLTNVML 360
Query: 1410 YWTTGTITSSQRFYKENLXQGVMAK*HEAIKVHVPHGLAGFPSPRCTLPRKVGEEQYPKL 1589
YWTTGTI SSQRFYKENL QG M + HE +KV+VP G + FP P K +YPKL
Sbjct: 361 YWTTGTIISSQRFYKENLGQGWMTQKHERMKVYVPTGFSAFPFELLHTPEKWVRFKYPKL 420
Query: 1590 ISYSYMAGGDHFAAFEDPELLAKNI 1664
ISYSYM G HFAAFE+PELLA++I
Sbjct: 421 ISYSYMVRGGHFAAFEEPELLAQDI 445
>ref|NP_001129490.1| epoxide hydrolase 1 [Homo sapiens].
Length = 455
Score = 741 bits (1913), Expect = 0.0
Identities = 359/445 (80%), Positives = 386/445 (86%), Gaps = 1/445 (0%)
Frame = +3
Query: 333 MWLEILLASVLGFVIYWFVSKDKEETLLLGDGWWGPGSRPAAAEDESIRPFKVETSDEEI 512
MWLEILL SVLGF IYWF+S+DKEETL L DGWWGPG+R AA ED+SIRPFKVETSDEEI
Sbjct: 1 MWLEILLTSVLGFAIYWFISRDKEETLPLEDGWWGPGTRSAAREDDSIRPFKVETSDEEI 60
Query: 513 NDLHQRIEKFRLTPPLEDSRFHYGFNSNYLKKIISYWRNTFDWRKQVEVLNKYPHFKTKI 692
+DLHQRI+KFR TPPLEDS FHYGFNSNYLKK+ISYWRN FDW+KQVE+LN+YPHFKTKI
Sbjct: 61 HDLHQRIDKFRFTPPLEDSCFHYGFNSNYLKKVISYWRNEFDWKKQVEILNRYPHFKTKI 120
Query: 693 EGLDIHFIHVKPPQLPSGRTAKPLLMVHGWPGCFYEFYKIIPLLTDPKNHGLSDEHVFEV 872
EGLDIHFIHVKPPQLP+G T KPLLMVHGWPG FYEFYKIIPLLTDPKNHGLSDEHVFEV
Sbjct: 121 EGLDIHFIHVKPPQLPAGHTPKPLLMVHGWPGSFYEFYKIIPLLTDPKNHGLSDEHVFEV 180
Query: 873 ICPSIPGYGFSEASSKKGFNSVATARIFYKLMLRLGFQEFYLQGGDWGALICTNMAQLVP 1052
ICPSIPGYGFSEASSKKGFNSVATARIFYKLMLRLGFQEFY+QGGDWG+LICTNMAQLVP
Sbjct: 181 ICPSIPGYGFSEASSKKGFNSVATARIFYKLMLRLGFQEFYIQGGDWGSLICTNMAQLVP 240
Query: 1053 SHVKGLHLNVALVLRNVYTLTXXXXXXXXXXXXYTERDLELLYPF-QKTFYTLMRESGYM 1229
SHVKGLHLN+ALVL N TLT TERD+ELLYP +K FY+LMRESGYM
Sbjct: 241 SHVKGLHLNMALVLSNFSTLTLLLGQRFGRFLGLTERDVELLYPVKEKVFYSLMRESGYM 300
Query: 1230 HIQSTKPDTVGCALNDSPVGLAAYILEKFSTWTNEEFRDLEDGGLERKFSLDELLTVIML 1409
HIQ TKPDTVG ALNDSPVGLAAYILEKFSTWTN EFR LEDGGLERKFSLD+LLT +ML
Sbjct: 301 HIQCTKPDTVGSALNDSPVGLAAYILEKFSTWTNTEFRYLEDGGLERKFSLDDLLTNVML 360
Query: 1410 YWTTGTITSSQRFYKENLXQGVMAK*HEAIKVHVPHGLAGFPSPRCTLPRKVGEEQYPKL 1589
YWTTGTI SSQRFYKENL QG M + HE +KV+VP G + FP P K +YPKL
Sbjct: 361 YWTTGTIISSQRFYKENLGQGWMTQKHERMKVYVPTGFSAFPFELLHTPEKWVRFKYPKL 420
Query: 1590 ISYSYMAGGDHFAAFEDPELLAKNI 1664
ISYSYM G HFAAFE+PELLA++I
Sbjct: 421 ISYSYMVRGGHFAAFEEPELLAQDI 445
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 63,801,131
Number of extensions: 1768424
Number of successful extensions: 6796
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 6776
Number of HSP's successfully gapped: 2
Length of query: 560
Length of database: 18,297,164
Length adjustment: 108
Effective length of query: 452
Effective length of database: 14,737,052
Effective search space: 6661147504
Effective search space used: 6661147504
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007076
(1680 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_034275.1| epoxide hydrolase 1 [Mus musculus]. 738 0.0
>ref|NP_034275.1| epoxide hydrolase 1 [Mus musculus].
Length = 455
Score = 738 bits (1906), Expect = 0.0
Identities = 348/445 (78%), Positives = 391/445 (87%), Gaps = 1/445 (0%)
Frame = +3
Query: 333 MWLEILLASVLGFVIYWFVSKDKEETLLLGDGWWGPGSRPAAAEDESIRPFKVETSDEEI 512
MWLE++LASVLGFVIYWFVS+DKEETL L DGWWGPGS+P+A EDESIRPFKVETSDEEI
Sbjct: 1 MWLELILASVLGFVIYWFVSRDKEETLPLEDGWWGPGSKPSAKEDESIRPFKVETSDEEI 60
Query: 513 NDLHQRIEKFRLTPPLEDSRFHYGFNSNYLKKIISYWRNTFDWRKQVEVLNKYPHFKTKI 692
DLHQRI++FR +PPLE SRFHYGFNS+YLKK++S+WRN FDWRKQVE+LN+YPHFKTKI
Sbjct: 61 KDLHQRIDRFRASPPLEGSRFHYGFNSSYLKKVVSFWRNEFDWRKQVEILNQYPHFKTKI 120
Query: 693 EGLDIHFIHVKPPQLPSGRTAKPLLMVHGWPGCFYEFYKIIPLLTDPKNHGLSDEHVFEV 872
EGLDIHFIHVKPPQLPSGRT KPLLMVHGWPG FYEFYKIIPLLTDPK HGLSDEHVFEV
Sbjct: 121 EGLDIHFIHVKPPQLPSGRTPKPLLMVHGWPGSFYEFYKIIPLLTDPKTHGLSDEHVFEV 180
Query: 873 ICPSIPGYGFSEASSKKGFNSVATARIFYKLMLRLGFQEFYLQGGDWGALICTNMAQLVP 1052
ICPSIPGYGFSEASSKKG NSVATARIFYKLM RLGFQ+FY+QGGDWG+LICTN+AQ+VP
Sbjct: 181 ICPSIPGYGFSEASSKKGLNSVATARIFYKLMSRLGFQKFYIQGGDWGSLICTNIAQMVP 240
Query: 1053 SHVKGLHLNVALVLRNVYTLTXXXXXXXXXXXXYTERDLELLYPF-QKTFYTLMRESGYM 1229
+HVKGLHLN++ + RN+Y+LT YTE+DLELLYPF +K FY +MRESGY+
Sbjct: 241 NHVKGLHLNMSFISRNIYSLTPLLGQRFGRFLGYTEKDLELLYPFKEKVFYNIMRESGYL 300
Query: 1230 HIQSTKPDTVGCALNDSPVGLAAYILEKFSTWTNEEFRDLEDGGLERKFSLDELLTVIML 1409
HIQ+TKPDTVGCALNDSPVGLAAYILEKFSTWT E+R+LEDGGLERKFSL++LLT IM+
Sbjct: 301 HIQATKPDTVGCALNDSPVGLAAYILEKFSTWTKSEYRELEDGGLERKFSLEDLLTNIMI 360
Query: 1410 YWTTGTITSSQRFYKENLXQGVMAK*HEAIKVHVPHGLAGFPSPRCTLPRKVGEEQYPKL 1589
YWTTGTI SSQRFYKENL QGVM HE +KV VP G + FPS P K + +YPKL
Sbjct: 361 YWTTGTIVSSQRFYKENLGQGVMVHRHEGMKVFVPTGYSAFPSEILHAPEKWVKVKYPKL 420
Query: 1590 ISYSYMAGGDHFAAFEDPELLAKNI 1664
ISYSYM G HFAAFE+P+LLA++I
Sbjct: 421 ISYSYMERGGHFAAFEEPKLLAQDI 445
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 53,615,641
Number of extensions: 1457007
Number of successful extensions: 5379
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 5355
Number of HSP's successfully gapped: 1
Length of query: 560
Length of database: 15,617,559
Length adjustment: 107
Effective length of query: 453
Effective length of database: 12,403,707
Effective search space: 5618879271
Effective search space used: 5618879271
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007076
(1680 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_999520.1| epoxide hydrolase 1 [Sus scrofa]. 837 0.0
>ref|NP_999520.1| epoxide hydrolase 1 [Sus scrofa].
Length = 454
Score = 837 bits (2163), Expect = 0.0
Identities = 408/449 (90%), Positives = 415/449 (92%)
Frame = +3
Query: 333 MWLEILLASVLGFVIYWFVSKDKEETLLLGDGWWGPGSRPAAAEDESIRPFKVETSDEEI 512
MWLEILLASVLGFVIYWFVSKDKEETLLLGDGWWGPGSRPAAAEDESIRPFKVETSDEEI
Sbjct: 1 MWLEILLASVLGFVIYWFVSKDKEETLLLGDGWWGPGSRPAAAEDESIRPFKVETSDEEI 60
Query: 513 NDLHQRIEKFRLTPPLEDSRFHYGFNSNYLKKIISYWRNTFDWRKQVEVLNKYPHFKTKI 692
NDLHQRIEKFRLTPPLEDSRFHYGFNSNYLKKIISYWRNTFDWRKQVEVLNKYPHFKTKI
Sbjct: 61 NDLHQRIEKFRLTPPLEDSRFHYGFNSNYLKKIISYWRNTFDWRKQVEVLNKYPHFKTKI 120
Query: 693 EGLDIHFIHVKPPQLPSGRTAKPLLMVHGWPGCFYEFYKIIPLLTDPKNHGLSDEHVFEV 872
EGLDIHFIHVKPPQLPSGRTAKPLLMVHGWPGCFYEFYKIIPLLTDPKNHGLSDEHVFEV
Sbjct: 121 EGLDIHFIHVKPPQLPSGRTAKPLLMVHGWPGCFYEFYKIIPLLTDPKNHGLSDEHVFEV 180
Query: 873 ICPSIPGYGFSEASSKKGFNSVATARIFYKLMLRLGFQEFYLQGGDWGALICTNMAQLVP 1052
ICPSIPGYGFSEASSKKGFNSVA ARIFYKLMLRLGFQEFYLQGGDWG+LICTNMAQLVP
Sbjct: 181 ICPSIPGYGFSEASSKKGFNSVAAARIFYKLMLRLGFQEFYLQGGDWGSLICTNMAQLVP 240
Query: 1053 SHVKGLHLNVALVLRNVYTLTXXXXXXXXXXXXYTERDLELLYPFQKTFYTLMRESGYMH 1232
SHVKGLHLNVALVLRNVYTLT YTERDLELLYPF+KTFYTLMRESGYMH
Sbjct: 241 SHVKGLHLNVALVLRNVYTLTFFLGRRLGRLFGYTERDLELLYPFKKTFYTLMRESGYMH 300
Query: 1233 IQSTKPDTVGCALNDSPVGLAAYILEKFSTWTNEEFRDLEDGGLERKFSLDELLTVIMLY 1412
IQSTKPDTVGCALNDSPVGLAAYILEKFSTWTNEEFRDLEDGGLERKFSLDELLTVIMLY
Sbjct: 301 IQSTKPDTVGCALNDSPVGLAAYILEKFSTWTNEEFRDLEDGGLERKFSLDELLTVIMLY 360
Query: 1413 WTTGTITSSQRFYKENLXQGVMAK*HEAIKVHVPHGLAGFPSPRCTLPRKVGEEQYPKLI 1592
WTTGTITSSQRFYKENL QGVMA HEAIKVHVP G A FPS P K + +YPKLI
Sbjct: 361 WTTGTITSSQRFYKENLGQGVMANKHEAIKVHVPTGFAAFPSEVLHCPEKWVKNKYPKLI 420
Query: 1593 SYSYMAGGDHFAAFEDPELLAKNIASSWG 1679
SYSYMA G HFAAFE+PELLA++I G
Sbjct: 421 SYSYMARGGHFAAFEEPELLAQDIRKFMG 449
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 41,618,340
Number of extensions: 1344702
Number of successful extensions: 4622
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 4598
Number of HSP's successfully gapped: 1
Length of query: 560
Length of database: 11,343,932
Length adjustment: 104
Effective length of query: 456
Effective length of database: 8,754,644
Effective search space: 3992117664
Effective search space used: 3992117664
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007076
(1680 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr10 446 e-122
>Sscrofa_Chr10
|| Length = 79102373
Score = 446 bits (225), Expect = e-122
Identities = 225/225 (100%)
Strand = Plus / Minus
Query: 104 cagtgggggaacgagggtggtgcctacagcctccccgcctctcctgcacacccctggctc 163
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16034898 cagtgggggaacgagggtggtgcctacagcctccccgcctctcctgcacacccctggctc 16034839
Query: 164 tgcttccctggctgcttcccaaggaagtgatcaagggtgagaatgaggagctcacgtgga 223
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16034838 tgcttccctggctgcttcccaaggaagtgatcaagggtgagaatgaggagctcacgtgga 16034779
Query: 224 cagtgaaagcactgaggtcgttctccccggccgagggaagtcagaggtttacatcccagc 283
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16034778 cagtgaaagcactgaggtcgttctccccggccgagggaagtcagaggtttacatcccagc 16034719
Query: 284 gggaagtgccaaccaggctcttggcccctctgtgctgaagtcagg 328
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16034718 gggaagtgccaaccaggctcttggcccctctgtgctgaagtcagg 16034674
Score = 408 bits (206), Expect = e-111
Identities = 223/231 (96%)
Strand = Plus / Minus
Query: 695 agggctggacatccacttcatccacgtgaagnnnnnnnagctgccctccggccgcaccgc 754
||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 16023141 agggctggacatccacttcatccacgtgaagcccccccagctgccctccggccgcaccgc 16023082
Query: 755 gaagcccttgctgatggtgcacggctggcctggctgcttctacgagttttataagatcat 814
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 16023081 gaagcccttgctgatggtgcatggctggcctggctgcttctacgagttttataagatcat 16023022
Query: 815 cccgctcctgacggaccccaagaaccacggcctgagcgatgagcatgtgttcgaagtcat 874
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16023021 cccgctcctgacggaccccaagaaccacggcctgagcgatgagcatgtgttcgaagtcat 16022962
Query: 875 ctgtccatccattcctggctacggcttctcagaggcatcctctaagaaagg 925
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16022961 ctgtccatccattcctggctacggcttctcagaggcatcctctaagaaagg 16022911
Score = 400 bits (202), Expect = e-109
Identities = 208/210 (99%)
Strand = Plus / Minus
Query: 1052 cagccacgtgaaaggcctgcacttgaacgtagccctggttttaagaaatgtctacaccct 1111
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16021644 cagccacgtgaaaggcctgcacttgaacgtagccctggttttaagaaatgtctacaccct 16021585
Query: 1112 gacctttttcctgggacggcgtttggggaggctttttggctacactgagagggacctcga 1171
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 16021584 gacctttttcctgggacggcgtttgggaaggctttttggctacactgagagggacctcga 16021525
Query: 1172 gctgctttaccccttccagaagaccttctacaccttgatgagggagagcggctacatgca 1231
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16021524 gctgctttaccccttcaagaagaccttctacaccttgatgagggagagcggctacatgca 16021465
Query: 1232 catccagagcaccaagccggacaccgtggg 1261
||||||||||||||||||||||||||||||
Sbjct: 16021464 catccagagcaccaagccggacaccgtggg 16021435
Score = 381 bits (192), Expect = e-103
Identities = 192/192 (100%)
Strand = Plus / Minus
Query: 325 caggagtcatgtggctggaaatactcctcgcctctgtgctgggctttgtcatctactggt 384
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16032200 caggagtcatgtggctggaaatactcctcgcctctgtgctgggctttgtcatctactggt 16032141
Query: 385 tcgtctccaaggacaaggaggagaccttgctccttggagatggctggtgggggcccggat 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16032140 tcgtctccaaggacaaggaggagaccttgctccttggagatggctggtgggggcccggat 16032081
Query: 445 caaggcccgcggctgcggaggacgagagcatccggccattcaaggtggagacgtcagacg 504
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16032080 caaggcccgcggctgcggaggacgagagcatccggccattcaaggtggagacgtcagacg 16032021
Query: 505 aggagatcaacg 516
||||||||||||
Sbjct: 16032020 aggagatcaacg 16032009
Score = 361 bits (182), Expect = 8e-97
Identities = 182/182 (100%)
Strand = Plus / Minus
Query: 516 gacttacaccagaggatcgagaagtttcgcttaaccccgcctttggaggacagccgcttc 575
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16029503 gacttacaccagaggatcgagaagtttcgcttaaccccgcctttggaggacagccgcttc 16029444
Query: 576 cactacgggttcaactccaactatctgaagaaaatcatctcctactggcggaacacattc 635
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16029443 cactacgggttcaactccaactatctgaagaaaatcatctcctactggcggaacacattc 16029384
Query: 636 gactggaggaagcaggtggaggttctcaacaagtaccctcacttcaagaccaagattgaa 695
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16029383 gactggaggaagcaggtggaggttctcaacaagtaccctcacttcaagaccaagattgaa 16029324
Query: 696 gg 697
||
Sbjct: 16029323 gg 16029322
Score = 238 bits (120), Expect = 8e-60
Identities = 129/132 (97%)
Strand = Plus / Minus
Query: 923 aggcttcaactcagtggccactgccaggatcttttacaagctgatgctgcggctgggctt 982
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 16022289 aggcttcaactcagtggctgctgccaggatcttttacaagctgatgctgcggctgggctt 16022230
Query: 983 ccaggaattctaccttcaaggcggagactggggggccctgatctgcaccaacatggccca 1042
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 16022229 ccaggaattctaccttcaaggcggagactgggggtccctgatctgcaccaacatggccca 16022170
Query: 1043 gctggtgcccag 1054
||||||||||||
Sbjct: 16022169 gctggtgcccag 16022158
Score = 234 bits (118), Expect = 1e-58
Identities = 126/129 (97%)
Strand = Plus / Minus
Query: 1368 aggaagttctccctggatgagctgctgacagtcatcatgctctactggacaacgggcacc 1427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16018042 aggaagttctccctggatgagctgctgacagtcatcatgctctactggacaacgggcacc 16017983
Query: 1428 atcacctcctcccagcgcttctacaaggagaacctangacagggcgtgatggccaaatag 1487
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||
Sbjct: 16017982 atcacctcctcccagcgcttctacaaggagaacctaggacagggcgtgatggccaataag 16017923
Query: 1488 catgaggcg 1496
|||||||||
Sbjct: 16017922 catgaggcg 16017914
Score = 220 bits (111), Expect = 2e-54
Identities = 111/111 (100%)
Strand = Plus / Minus
Query: 1260 ggctgcgccctgaatgactcccccgtgggcctggctgcctacatcctagagaagttttct 1319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16019440 ggctgcgccctgaatgactcccccgtgggcctggctgcctacatcctagagaagttttct 16019381
Query: 1320 acctggaccaacgaagagttccgggacctggaggatggcggcctggagagg 1370
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16019380 acctggaccaacgaagagttccgggacctggaggatggcggcctggagagg 16019330
Score = 174 bits (88), Expect = 1e-40
Identities = 165/188 (87%), Gaps = 5/188 (2%)
Strand = Plus / Minus
Query: 1496 gatcaaggtccacgtgccccacgggcttgctggctttccttccccgaggtgt-acactgc 1554
||||||||||||||||||| ||| |||||| ||| |||||| ||||||| |||||||
Sbjct: 16017065 gatcaaggtccacgtgcccaccggctttgctgccttcccttcc--gaggtgttacactgc 16017008
Query: 1555 ccagaaaagtgggtgaagaac-agtaccccaaactcatctcctattcctacatggccnnn 1613
||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||
Sbjct: 16017007 ccagaaaagtgggtgaagaacaagtacccaaaactcatctcctattcctacatggcccgt 16016948
Query: 1614 nnnnaccactttgccgcctttgaggacccggagctgctggccaagaacat-cgcaagttc 1672
||||||||||||||||||||| ||||||||||||||| || |||| |||||||||
Sbjct: 16016947 gggggccactttgccgcctttgaggagccggagctgctggcccaggacatccgcaagttc 16016888
Query: 1673 atggggct 1680
||||||||
Sbjct: 16016887 atggggct 16016880
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 39,699,352
Number of extensions: 240
Number of successful extensions: 240
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 238
Number of HSP's successfully gapped: 10
Length of query: 1680
Length of database: 2,808,509,378
Length adjustment: 22
Effective length of query: 1658
Effective length of database: 2,808,408,574
Effective search space: 4656341415692
Effective search space used: 4656341415692
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)