Animal-Genome cDNA 20110601C-007159


Search to RefSeqBP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-007159
         (1347 letters)

Database: RefSeq49_BP.fasta 
           33,088 sequences; 17,681,374 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001070482.1| granulins [Bos taurus].                           599   e-171
Alignment   gi|XP_002689022.1| PREDICTED: multiple EGF-like-domains 10 [Bos...    65   1e-10
Alignment   gi|NP_001039916.2| multiple EGF-like-domains 10 [Bos taurus].         65   2e-10
Alignment   gi|XP_001788534.1| PREDICTED: multiple EGF-like-domains 10 [Bos...    65   2e-10
Alignment   gi|XP_002694223.1| PREDICTED: multiple epidermal growth factor-...    60   6e-09
Alignment   gi|XP_873582.3| PREDICTED: multiple epidermal growth factor-lik...    60   6e-09
Alignment   gi|XP_002685354.1| PREDICTED: low-density lipoprotein receptor-...    54   4e-07
Alignment   gi|XP_001788490.1| PREDICTED: low-density lipoprotein receptor-...    54   4e-07
Alignment   gi|NP_777131.1| SCO-spondin precursor [Bos taurus].                   53   7e-07
Alignment   gi|XP_002707809.1| PREDICTED: hypothetical protein [Bos taurus].      52   2e-06

>ref|NP_001070482.1| granulins [Bos taurus].
          Length = 587

 Score =  599 bits (1545), Expect = e-171
 Identities = 254/364 (69%), Positives = 292/364 (80%), Gaps = 1/364 (0%)
 Frame = +1

Query: 259  MWTLVSWVALVTGLVAGTQCPDGQLCPVACCLDPGGASYSCCNPVPDKWPKALSQHLGVP 438
            MWTLVSWVALVTGLV GTQCPDGQLCPVACCLDP GA+YSCCNPV D+ P  LSQ LG P
Sbjct: 1    MWTLVSWVALVTGLVVGTQCPDGQLCPVACCLDPNGATYSCCNPVQDQRPSVLSQRLGRP 60

Query: 439  CKTKAQCPPGHSCILTTNETSNCCPFPEAVSCRDGLHCCPQGFHCSADGWSCLRRPDTKP 618
            C+    C PG+SCILT + TS+CCPFPEAVSC DG HCCP+GFHC+ADG SC +R DTKP
Sbjct: 61   CQADGHCAPGYSCILTVSGTSSCCPFPEAVSCGDGRHCCPRGFHCNADGRSCFQRSDTKP 120

Query: 619  SDDILCPNSQFHCPNSSTCCTMLDGSWGCCPMPQASCCGDKVHCCPHGTSCDLAHSRCLT 798
             D + CP+ QF CPNSSTCCTM DGSWGCCPMPQASCC DK+HCCPHGTSCDLA  RCL+
Sbjct: 121  LDAVQCPDKQFQCPNSSTCCTMPDGSWGCCPMPQASCCEDKIHCCPHGTSCDLARGRCLS 180

Query: 799  VTNTHPMA-KIPSQETIKTAVQCPDAESQCHNNSTCCKLSSGKYGCCPLPNATCCSDHIH 975
             T THP+A K+P+ +T  + + CPD +SQC + STCCKL +GKYGCCP+PNA CCSDH+H
Sbjct: 181  ATGTHPLAKKMPAHKTKSSVILCPDGQSQCPDGSTCCKLPTGKYGCCPMPNAICCSDHLH 240

Query: 976  CCPHGFVCDPVKKKCFSKENEAIDFFTKLPAHSVQEVKCDTKVSCPDDYTCCRLQSGKWG 1155
            CCP   VCD  + KC SKEN A D  TKLPAH+VQ+VKCD +VSCPDDYTCCRLQSG WG
Sbjct: 241  CCPQNTVCDLTQSKCLSKEN-ATDLLTKLPAHTVQDVKCDMEVSCPDDYTCCRLQSGAWG 299

Query: 1156 CCPFVQAVCCNDHVHCCPTGYQCNIKKGTCDLETQWVPWKEENPXSLXPAELLASGKDVP 1335
            CCPFVQAVCC DHVHCCP+G++C+ +KG C+  T+ VPW ++ P  L   +L A   DVP
Sbjct: 300  CCPFVQAVCCEDHVHCCPSGFRCDTEKGVCEQGTRQVPWMKKAPAHLSLLDLGAVEGDVP 359

Query: 1336 CDNV 1347
            CDNV
Sbjct: 360  CDNV 363



 Score =  256 bits (655), Expect = 2e-68
 Identities = 135/368 (36%), Positives = 179/368 (48%), Gaps = 24/368 (6%)
 Frame = +1

Query: 316  CPDGQLCPVAC--CLDPGGASYSCCNPVPDKWPKALSQHLGVPCKT-KAQCPPGHSCILT 486
            CP G  C +A   CL   G      +P+  K P   ++   + C   ++QCP G +C   
Sbjct: 165  CPHGTSCDLARGRCLSATGT-----HPLAKKMPAHKTKSSVILCPDGQSQCPDGSTCCKL 219

Query: 487  TNETSNCCPFPEAVSCRDGLHCCPQGFHCSADGWSCLRRPDTKPS---------DDILCP 639
                  CCP P A+ C D LHCCPQ   C      CL + +              D+ C 
Sbjct: 220  PTGKYGCCPMPNAICCSDHLHCCPQNTVCDLTQSKCLSKENATDLLTKLPAHTVQDVKC- 278

Query: 640  NSQFHCPNSSTCCTMLDGSWGCCPMPQASCCGDKVHCCPHGTSCDLAHSRCLTVTNTHP- 816
            + +  CP+  TCC +  G+WGCCP  QA CC D VHCCP G  CD     C   T   P 
Sbjct: 279  DMEVSCPDDYTCCRLQSGAWGCCPFVQAVCCEDHVHCCPSGFRCDTEKGVCEQGTRQVPW 338

Query: 817  MAKIPSQET------IKTAVQCPDAESQCHNNSTCCKLSSGKYGCCPLPNATCCSDHIHC 978
            M K P+  +      ++  V C +  S C +++TCC+L SG++ CCP P A CCSDH HC
Sbjct: 339  MKKAPAHLSLLDLGAVEGDVPCDNVTS-CPSSTTCCRLKSGEWACCPAPEAVCCSDHQHC 397

Query: 979  CPHGFVCDPVKKKCFSKENEAIDFFTKLPAHSV-----QEVKCDTKVSCPDDYTCCRLQS 1143
            CP G+ C  V ++   +  + +    K+PAH       +++ CD   SCP   TCC    
Sbjct: 398  CPKGYTC--VARRHCKRGKQVVTGLDKVPAHRASPSHPRDMGCDQHTSCPVGQTCCPSLR 455

Query: 1144 GKWGCCPFVQAVCCNDHVHCCPTGYQCNIKKGTCDLETQWVPWKEENPXSLXPAELLASG 1323
            G W CC    AVCC D  HCCP GY CN+K  +C+        KE +P  + PA  LASG
Sbjct: 456  GAWACCKLPHAVCCEDRQHCCPAGYTCNVKARSCE--------KEVDP--VHPAVRLASG 505

Query: 1324 KDVPCDNV 1347
              V   NV
Sbjct: 506  PPVGMGNV 513



 Score =  220 bits (561), Expect = 2e-57
 Identities = 123/383 (32%), Positives = 166/383 (43%), Gaps = 54/383 (14%)
 Frame = +1

Query: 310  TQCPDGQLC------PVACCLDPGGASYS----CC--NPVPD-KWPKALSQHLG------ 432
            +QCPDG  C         CC  P     S    CC  N V D    K LS+         
Sbjct: 208  SQCPDGSTCCKLPTGKYGCCPMPNAICCSDHLHCCPQNTVCDLTQSKCLSKENATDLLTK 267

Query: 433  --------VPCKTKAQCPPGHSCILTTNETSNCCPFPEAVSCRDGLHCCPQGFHCSADGW 588
                    V C  +  CP  ++C    +    CCPF +AV C D +HCCP GF C  +  
Sbjct: 268  LPAHTVQDVKCDMEVSCPDDYTCCRLQSGAWGCCPFVQAVCCEDHVHCCPSGFRCDTEKG 327

Query: 589  SCLRRPDTKP-----------------SDDILCPNSQFHCPNSSTCCTMLDGSWGCCPMP 717
             C +     P                   D+ C N    CP+S+TCC +  G W CCP P
Sbjct: 328  VCEQGTRQVPWMKKAPAHLSLLDLGAVEGDVPCDNVT-SCPSSTTCCRLKSGEWACCPAP 386

Query: 718  QASCCGDKVHCCPHGTSCDLAHSRCL----TVTNTHPMAKIPSQETIKTAVQCPDAESQC 885
            +A CC D  HCCP G +C +A   C      VT    +    +  +    + C D  + C
Sbjct: 387  EAVCCSDHQHCCPKGYTC-VARRHCKRGKQVVTGLDKVPAHRASPSHPRDMGC-DQHTSC 444

Query: 886  HNNSTCCKLSSGKYGCCPLPNATCCSDHIHCCPHGFVCDPVKKKCFSKENEAIDFFTKL- 1062
                TCC    G + CC LP+A CC D  HCCP G+ C+ VK +   KE + +    +L 
Sbjct: 445  PVGQTCCPSLRGAWACCKLPHAVCCEDRQHCCPAGYTCN-VKARSCEKEVDPVHPAVRLA 503

Query: 1063 --PAHSVQEVKCDTKVSCPDDYTCCRLQSGKWGCCPFVQAVCCNDHVHCCPTGYQCNIKK 1236
              P   +  V+C  +  C D+ TCC    G W CCP+ +  CC D  HCCP+G++C  + 
Sbjct: 504  SGPPVGMGNVECGARHFCHDNQTCCPDSQGGWACCPYRKGTCCGDKHHCCPSGFRCAARG 563

Query: 1237 GTC--DLETQW-VPWKEENPXSL 1296
              C      +W  PW++  P  L
Sbjct: 564  TKCLRREALRWDAPWRDPTPRQL 586


>ref|XP_002689022.1| PREDICTED: multiple EGF-like-domains 10 [Bos taurus].
          Length = 1136

 Score = 65.5 bits (158), Expect = 1e-10
 Identities = 82/354 (23%), Positives = 118/354 (33%), Gaps = 43/354 (12%)
 Frame = +1

Query: 313  QCPDGQ-LCPVACCLDPGGASYSCCNPVPDKWPKALSQHLGVPCKTKAQCPPGHSCILTT 489
            +C  G+ + P  C  +PG    +C +            H G  C ++ QC  G  C    
Sbjct: 112  KCVHGRCIAPNTCQCEPGWGGTNCSSACD-------GDHWGPHCSSRCQCKNGALC---- 160

Query: 490  NETSNCCPFPEAVSCRDGLHCCPQGFHCSADGWSCLRRPD--TKPSDDILCPNSQFHCPN 663
            N  +  C              C  GF     GW C  R +  T  +D   C + +  C N
Sbjct: 161  NPITGACH-------------CAAGFR----GWRCEERCEQGTYGND---C-HQRCQCQN 199

Query: 664  SSTCCTMLDGSWGCCPMPQASCCGDKVHCCPHGTSCDLAHSRCLTVTN------THPMAK 825
             +TC   + G   C P    + C D      HG  C+    RC           T   + 
Sbjct: 200  GATC-DHVTGECRCPPGYTGAFCEDLCPPGKHGPQCE---QRCPCQNGGVCHHVTGECSC 255

Query: 826  IPSQETIKTAVQCPDA--------ESQCHNNSTCCKLSSGKYGCCPLPNATCCSDH---- 969
             P          CP+         E QCHN  T C  ++G+  C P      C D     
Sbjct: 256  PPGWLGTVCGQPCPEGRFGKNCSQECQCHNGGT-CDAATGQCHCSPGYTGERCQDECPVG 314

Query: 970  ---IHC-----CPHGFVCDPVKKKCFSKENEAID-FFTKLPAHSVQEVKCDTKVSCPDDY 1122
               +HC     C +G  C  V   C  +   + D    +L    +  ++CD +  C  D 
Sbjct: 315  TYGVHCAETCQCINGGKCYHVSGSCLCEAGFSGDRCEARLCPEGLYGIRCDKRCPCHVDN 374

Query: 1123 T-CCRLQSGKWGCCPFVQAVCCND------------HVHCCPTGYQCNIKKGTC 1245
            T  C   SG+  C P    + CN+             +  C  G  C+   G C
Sbjct: 375  TLSCHPMSGECACKPGWSGLYCNETCSPGFYGEACQQICSCQNGADCDSVTGKC 428



 Score = 57.0 bits (136), Expect = 4e-08
 Identities = 81/362 (22%), Positives = 108/362 (29%), Gaps = 38/362 (10%)
 Frame = +1

Query: 316  CPDGQLCPVA---CCLDPGGASYSCCNPVPDKWPKALSQHLGVPCKTKAQCPPGHSCILT 486
            C +G +C      C   PG     C  P P+          G  C  + QC  G +C   
Sbjct: 240  CQNGGVCHHVTGECSCPPGWLGTVCGQPCPEG-------RFGKNCSQECQCHNGGTCDAA 292

Query: 487  TNETSNCCPFPEAVSCRD-------GLHC-----CPQGFHCSADGWSCLRRPDTKPS--D 624
            T +  +C P      C+D       G+HC     C  G  C     SCL          +
Sbjct: 293  TGQC-HCSPGYTGERCQDECPVGTYGVHCAETCQCINGGKCYHVSGSCLCEAGFSGDRCE 351

Query: 625  DILCPNSQFHCPNSSTCCTMLDGSWGCCPMPQASCCG---------------------DK 741
              LCP   +       C   +D +  C PM     C                       +
Sbjct: 352  ARLCPEGLYGIRCDKRCPCHVDNTLSCHPMSGECACKPGWSGLYCNETCSPGFYGEACQQ 411

Query: 742  VHCCPHGTSCDLAHSRCLTVTNTHPMAKIPSQETIKTAVQCPDAESQCHNNSTCCKLSSG 921
            +  C +G  CD    +C+           P  + I  ++ CP                 G
Sbjct: 412  ICSCQNGADCDSVTGKCICA---------PGFKGIDCSIPCP----------------LG 446

Query: 922  KYGCCPLPNATCCSDHIHCCPHGFVCDPVKKKCFSKENEAIDFFTKLPAHSVQEVKCDTK 1101
             YG   +  ++ CS     C +  VC PV   C                H V     D  
Sbjct: 447  TYG---INCSSLCS-----CKNDAVCSPVDGSCTCNAGW----------HGV-----DCS 483

Query: 1102 VSCPDDYTCCRLQSGKWGCCPFVQAVCCNDHVHCCPTGYQCNIKKGTCDLETQWVPWKEE 1281
            +SCP         SG WG   F   + C      C  G  CN   GTC     W   K E
Sbjct: 484  ISCP---------SGTWG---FGCNLTCQ-----CLNGGACNTLDGTCTCAPGWRGEKCE 526

Query: 1282 NP 1287
             P
Sbjct: 527  FP 528


>ref|NP_001039916.2| multiple EGF-like-domains 10 [Bos taurus].
          Length = 1136

 Score = 64.7 bits (156), Expect = 2e-10
 Identities = 82/354 (23%), Positives = 118/354 (33%), Gaps = 43/354 (12%)
 Frame = +1

Query: 313  QCPDGQ-LCPVACCLDPGGASYSCCNPVPDKWPKALSQHLGVPCKTKAQCPPGHSCILTT 489
            +C  G+ + P  C  +PG    +C +            H G  C ++ QC  G  C    
Sbjct: 112  KCVHGRCIAPNTCQCEPGWGGTNCSSACD-------GDHWGPHCSSRCQCKNGALC---- 160

Query: 490  NETSNCCPFPEAVSCRDGLHCCPQGFHCSADGWSCLRRPD--TKPSDDILCPNSQFHCPN 663
            N  +  C              C  GF     GW C  R +  T  +D   C + +  C N
Sbjct: 161  NPITGACH-------------CAAGFR----GWRCEERCEQGTYGND---C-HQRCQCQN 199

Query: 664  SSTCCTMLDGSWGCCPMPQASCCGDKVHCCPHGTSCDLAHSRCLTVTN------THPMAK 825
             +TC   + G   C P    + C D      HG  C+    RC           T   + 
Sbjct: 200  GATC-DHVTGECRCPPGYTGAFCEDLCPPGKHGPQCE---QRCPCQNGGVCHHVTGECSC 255

Query: 826  IPSQETIKTAVQCPDA--------ESQCHNNSTCCKLSSGKYGCCPLPNATCCSDH---- 969
             P          CP+         E QCHN  T C  ++G+  C P      C D     
Sbjct: 256  PPGWLGTVCGQPCPEGRFGKNCSQECQCHNGGT-CDAATGQCHCSPGYPGERCQDECPVG 314

Query: 970  ---IHC-----CPHGFVCDPVKKKCFSKENEAID-FFTKLPAHSVQEVKCDTKVSCPDDY 1122
               +HC     C +G  C  V   C  +   + D    +L    +  ++CD +  C  D 
Sbjct: 315  TYGVHCAETCQCINGGKCYHVSGSCLCEAGFSGDRCEARLCPEGLYGIRCDKRCPCHVDN 374

Query: 1123 T-CCRLQSGKWGCCPFVQAVCCND------------HVHCCPTGYQCNIKKGTC 1245
            T  C   SG+  C P    + CN+             +  C  G  C+   G C
Sbjct: 375  TLSCHPMSGECACKPGWSGLYCNETCSPGFYGEACQQICSCQNGADCDSVTGKC 428



 Score = 57.0 bits (136), Expect = 4e-08
 Identities = 81/362 (22%), Positives = 108/362 (29%), Gaps = 38/362 (10%)
 Frame = +1

Query: 316  CPDGQLCPVA---CCLDPGGASYSCCNPVPDKWPKALSQHLGVPCKTKAQCPPGHSCILT 486
            C +G +C      C   PG     C  P P+          G  C  + QC  G +C   
Sbjct: 240  CQNGGVCHHVTGECSCPPGWLGTVCGQPCPEG-------RFGKNCSQECQCHNGGTCDAA 292

Query: 487  TNETSNCCPFPEAVSCRD-------GLHC-----CPQGFHCSADGWSCLRRPDTKPS--D 624
            T +  +C P      C+D       G+HC     C  G  C     SCL          +
Sbjct: 293  TGQC-HCSPGYPGERCQDECPVGTYGVHCAETCQCINGGKCYHVSGSCLCEAGFSGDRCE 351

Query: 625  DILCPNSQFHCPNSSTCCTMLDGSWGCCPMPQASCCG---------------------DK 741
              LCP   +       C   +D +  C PM     C                       +
Sbjct: 352  ARLCPEGLYGIRCDKRCPCHVDNTLSCHPMSGECACKPGWSGLYCNETCSPGFYGEACQQ 411

Query: 742  VHCCPHGTSCDLAHSRCLTVTNTHPMAKIPSQETIKTAVQCPDAESQCHNNSTCCKLSSG 921
            +  C +G  CD    +C+           P  + I  ++ CP                 G
Sbjct: 412  ICSCQNGADCDSVTGKCICA---------PGFKGIDCSIPCP----------------LG 446

Query: 922  KYGCCPLPNATCCSDHIHCCPHGFVCDPVKKKCFSKENEAIDFFTKLPAHSVQEVKCDTK 1101
             YG   +  ++ CS     C +  VC PV   C                H V     D  
Sbjct: 447  TYG---INCSSLCS-----CKNDAVCSPVDGSCTCNAGW----------HGV-----DCS 483

Query: 1102 VSCPDDYTCCRLQSGKWGCCPFVQAVCCNDHVHCCPTGYQCNIKKGTCDLETQWVPWKEE 1281
            +SCP         SG WG   F   + C      C  G  CN   GTC     W   K E
Sbjct: 484  ISCP---------SGTWG---FGCNLTCQ-----CLNGGACNTLDGTCTCAPGWRGEKCE 526

Query: 1282 NP 1287
             P
Sbjct: 527  FP 528


>ref|XP_001788534.1| PREDICTED: multiple EGF-like-domains 10 [Bos taurus].
          Length = 1136

 Score = 64.7 bits (156), Expect = 2e-10
 Identities = 82/354 (23%), Positives = 118/354 (33%), Gaps = 43/354 (12%)
 Frame = +1

Query: 313  QCPDGQ-LCPVACCLDPGGASYSCCNPVPDKWPKALSQHLGVPCKTKAQCPPGHSCILTT 489
            +C  G+ + P  C  +PG    +C +            H G  C ++ QC  G  C    
Sbjct: 112  KCVHGRCIAPNTCQCEPGWGGTNCSSACD-------GDHWGPHCSSRCQCKNGALC---- 160

Query: 490  NETSNCCPFPEAVSCRDGLHCCPQGFHCSADGWSCLRRPD--TKPSDDILCPNSQFHCPN 663
            N  +  C              C  GF     GW C  R +  T  +D   C + +  C N
Sbjct: 161  NPITGACH-------------CAAGFR----GWRCEERCEQGTYGND---C-HQRCQCQN 199

Query: 664  SSTCCTMLDGSWGCCPMPQASCCGDKVHCCPHGTSCDLAHSRCLTVTN------THPMAK 825
             +TC   + G   C P    + C D      HG  C+    RC           T   + 
Sbjct: 200  GATC-DHVTGECRCPPGYTGAFCEDLCPPGKHGPQCE---QRCPCQNGGVCHHVTGECSC 255

Query: 826  IPSQETIKTAVQCPDA--------ESQCHNNSTCCKLSSGKYGCCPLPNATCCSDH---- 969
             P          CP+         E QCHN  T C  ++G+  C P      C D     
Sbjct: 256  PPGWLGTVCGQPCPEGRFGKNCSQECQCHNGGT-CDAATGQCHCSPGYPGERCQDECPVG 314

Query: 970  ---IHC-----CPHGFVCDPVKKKCFSKENEAID-FFTKLPAHSVQEVKCDTKVSCPDDY 1122
               +HC     C +G  C  V   C  +   + D    +L    +  ++CD +  C  D 
Sbjct: 315  TYGVHCAETCQCINGGKCYHVSGSCLCEAGFSGDRCEARLCPEGLYGIRCDKRCPCHVDN 374

Query: 1123 T-CCRLQSGKWGCCPFVQAVCCND------------HVHCCPTGYQCNIKKGTC 1245
            T  C   SG+  C P    + CN+             +  C  G  C+   G C
Sbjct: 375  TLSCHPMSGECACKPGWSGLYCNETCSPGFYGEACQQICSCQNGADCDSVTGKC 428



 Score = 57.0 bits (136), Expect = 4e-08
 Identities = 81/362 (22%), Positives = 108/362 (29%), Gaps = 38/362 (10%)
 Frame = +1

Query: 316  CPDGQLCPVA---CCLDPGGASYSCCNPVPDKWPKALSQHLGVPCKTKAQCPPGHSCILT 486
            C +G +C      C   PG     C  P P+          G  C  + QC  G +C   
Sbjct: 240  CQNGGVCHHVTGECSCPPGWLGTVCGQPCPEG-------RFGKNCSQECQCHNGGTCDAA 292

Query: 487  TNETSNCCPFPEAVSCRD-------GLHC-----CPQGFHCSADGWSCLRRPDTKPS--D 624
            T +  +C P      C+D       G+HC     C  G  C     SCL          +
Sbjct: 293  TGQC-HCSPGYPGERCQDECPVGTYGVHCAETCQCINGGKCYHVSGSCLCEAGFSGDRCE 351

Query: 625  DILCPNSQFHCPNSSTCCTMLDGSWGCCPMPQASCCG---------------------DK 741
              LCP   +       C   +D +  C PM     C                       +
Sbjct: 352  ARLCPEGLYGIRCDKRCPCHVDNTLSCHPMSGECACKPGWSGLYCNETCSPGFYGEACQQ 411

Query: 742  VHCCPHGTSCDLAHSRCLTVTNTHPMAKIPSQETIKTAVQCPDAESQCHNNSTCCKLSSG 921
            +  C +G  CD    +C+           P  + I  ++ CP                 G
Sbjct: 412  ICSCQNGADCDSVTGKCICA---------PGFKGIDCSIPCP----------------LG 446

Query: 922  KYGCCPLPNATCCSDHIHCCPHGFVCDPVKKKCFSKENEAIDFFTKLPAHSVQEVKCDTK 1101
             YG   +  ++ CS     C +  VC PV   C                H V     D  
Sbjct: 447  TYG---INCSSLCS-----CKNDAVCSPVDGSCTCNAGW----------HGV-----DCS 483

Query: 1102 VSCPDDYTCCRLQSGKWGCCPFVQAVCCNDHVHCCPTGYQCNIKKGTCDLETQWVPWKEE 1281
            +SCP         SG WG   F   + C      C  G  CN   GTC     W   K E
Sbjct: 484  ISCP---------SGTWG---FGCNLTCQ-----CLNGGACNTLDGTCTCAPGWRGEKCE 526

Query: 1282 NP 1287
             P
Sbjct: 527  FP 528


>ref|XP_002694223.1| PREDICTED: multiple epidermal growth factor-like domains 6-like [Bos
            taurus].
          Length = 1517

 Score = 59.7 bits (143), Expect = 6e-09
 Identities = 72/319 (22%), Positives = 93/319 (29%), Gaps = 3/319 (0%)
 Frame = +1

Query: 316  CPDGQLCP---VACCLDPGGASYSCCNPVPDKWPKALSQHLGVPCKTKAQCPPGHSCILT 486
            C +G LC    V C    G     C +  P  W        G  C  + QCPPG +C   
Sbjct: 1086 CLNGGLCDPHTVHCLCPAGWTGDKCQSSCPPSW-------FGEACAQRCQCPPGAACHHV 1138

Query: 487  TNETSNCCPFPEAVSCRDGLHCCPQGFHCSADGWSCLRRPDTKPSDDILCPNSQFHCPNS 666
            T E  +C P     SC      CP G      G  C                   HCP  
Sbjct: 1139 TGEC-HCPPGFTGPSCEQA---CPPGTFGERCGQQC-------------------HCPGE 1175

Query: 667  STCCTMLDGSWGCCPMPQASCCGDKVHCCPHGTSCDLAHSRCLTVTNTHPMAKIPSQETI 846
            +  C    G+  C P    + C  +      G  C+L    CL            S + +
Sbjct: 1176 NQACHPASGTCACAPGYHGAGCQQRCPPGRFGPGCELL-CGCLNG---------GSCDAV 1225

Query: 847  KTAVQCPDAESQCHNNSTCCKLSSGKYGCCPLPNATCCSDHIHCCPHGFVCDPVKKKCFS 1026
              A +CP          T C L+      CP         ++  C  G  CDPV   C  
Sbjct: 1226 TGACRCPAGFL-----GTDCSLA------CPHGRFGPGCAYVCGCGQGAACDPVTGSC-- 1272

Query: 1027 KENEAIDFFTKLPAHSVQEVKCDTKVSCPDDYTCCRLQSGKWGCCPFVQAVCCNDHVHCC 1206
                                      SCP   T    + G    CP  +     +H   C
Sbjct: 1273 --------------------------SCPPGRTGVHCEHG----CPQNRFGVNCEHACSC 1302

Query: 1207 PTGYQCNIKKGTCDLETQW 1263
              G  C+   G+C     W
Sbjct: 1303 RNGGLCHATNGSCSCGLGW 1321



 Score = 53.5 bits (127), Expect = 4e-07
 Identities = 85/375 (22%), Positives = 111/375 (29%), Gaps = 64/375 (17%)
 Frame = +1

Query: 313  QCPDGQLCPVA---CCLDPGGASYSCCNPVPDKWPKALSQHLGVPCKTKAQCPPGHSCIL 483
            QCP G  C      C   PG    SC    P   P    +  G  C     CP  +    
Sbjct: 1128 QCPPGAACHHVTGECHCPPGFTGPSCEQACP---PGTFGERCGQQC----HCPGENQACH 1180

Query: 484  TTNETSNCCPFPEAVSC-------RDGLHC-----CPQGFHCSADGWSCLRRPDTKPSD- 624
              + T  C P      C       R G  C     C  G  C A   +C        +D 
Sbjct: 1181 PASGTCACAPGYHGAGCQQRCPPGRFGPGCELLCGCLNGGSCDAVTGACRCPAGFLGTDC 1240

Query: 625  DILCPNSQFHCPNSSTC-------CTMLDGSWGC------------CPMPQASCCGDKVH 747
             + CP+ +F    +  C       C  + GS  C            CP  +     +   
Sbjct: 1241 SLACPHGRFGPGCAYVCGCGQGAACDPVTGSCSCPPGRTGVHCEHGCPQNRFGVNCEHAC 1300

Query: 748  CCPHGTSCDLAHSRC---LTVTNTHPMAKIPSQETIKTAVQCPDAESQCHNNSTC----- 903
             C +G  C   +  C   L  T  H     P+    +    C   E  CHN+  C     
Sbjct: 1301 SCRNGGLCHATNGSCSCGLGWTGPHCELACPAG---RYGAAC-SLECSCHNHGACEPTSG 1356

Query: 904  -CKLSSGKYG------CCPLPNATCCSDHIHCCPHGFVCDPVKKKCFSKENEAIDFFTK- 1059
             C+   G YG      C P  +   C     C  HG  CDPV  +C         F  + 
Sbjct: 1357 ACRCGPGFYGQACEHSCPPGFHGAGCQQTCQC-QHGAPCDPVSGQCLCPAGLHGQFCERG 1415

Query: 1060 -----LPAHSVQEVKCDTKVSCPDDYTCCRLQSGKWGCC-------PFVQAVCCNDHVHC 1203
                       Q+  C+  V C      C    G+ G          F    C    +HC
Sbjct: 1416 CEPGSFGEGCGQQCDCELGVPCDPVTGHCLCPPGRTGTTCDLGCRRGFFGPGCA---LHC 1472

Query: 1204 -CPTGYQCNIKKGTC 1245
             C  G  C+   G C
Sbjct: 1473 SCGGGADCDPVSGQC 1487


>ref|XP_873582.3| PREDICTED: multiple epidermal growth factor-like domains 6-like [Bos
            taurus].
          Length = 1517

 Score = 59.7 bits (143), Expect = 6e-09
 Identities = 72/319 (22%), Positives = 93/319 (29%), Gaps = 3/319 (0%)
 Frame = +1

Query: 316  CPDGQLCP---VACCLDPGGASYSCCNPVPDKWPKALSQHLGVPCKTKAQCPPGHSCILT 486
            C +G LC    V C    G     C +  P  W        G  C  + QCPPG +C   
Sbjct: 1086 CLNGGLCDPHTVHCLCPAGWTGDKCQSSCPPSW-------FGEACAQRCQCPPGAACHHV 1138

Query: 487  TNETSNCCPFPEAVSCRDGLHCCPQGFHCSADGWSCLRRPDTKPSDDILCPNSQFHCPNS 666
            T E  +C P     SC      CP G      G  C                   HCP  
Sbjct: 1139 TGEC-HCPPGFTGPSCEQA---CPPGTFGERCGQQC-------------------HCPGE 1175

Query: 667  STCCTMLDGSWGCCPMPQASCCGDKVHCCPHGTSCDLAHSRCLTVTNTHPMAKIPSQETI 846
            +  C    G+  C P    + C  +      G  C+L    CL            S + +
Sbjct: 1176 NQACHPASGTCACAPGYHGAGCQQRCPPGRFGPGCELL-CGCLNG---------GSCDAV 1225

Query: 847  KTAVQCPDAESQCHNNSTCCKLSSGKYGCCPLPNATCCSDHIHCCPHGFVCDPVKKKCFS 1026
              A +CP          T C L+      CP         ++  C  G  CDPV   C  
Sbjct: 1226 TGACRCPAGFL-----GTDCSLA------CPHGRFGPGCAYVCGCGQGAACDPVTGSC-- 1272

Query: 1027 KENEAIDFFTKLPAHSVQEVKCDTKVSCPDDYTCCRLQSGKWGCCPFVQAVCCNDHVHCC 1206
                                      SCP   T    + G    CP  +     +H   C
Sbjct: 1273 --------------------------SCPPGRTGVHCEHG----CPQNRFGVNCEHACSC 1302

Query: 1207 PTGYQCNIKKGTCDLETQW 1263
              G  C+   G+C     W
Sbjct: 1303 RNGGLCHATNGSCSCGLGW 1321



 Score = 53.5 bits (127), Expect = 4e-07
 Identities = 85/375 (22%), Positives = 111/375 (29%), Gaps = 64/375 (17%)
 Frame = +1

Query: 313  QCPDGQLCPVA---CCLDPGGASYSCCNPVPDKWPKALSQHLGVPCKTKAQCPPGHSCIL 483
            QCP G  C      C   PG    SC    P   P    +  G  C     CP  +    
Sbjct: 1128 QCPPGAACHHVTGECHCPPGFTGPSCEQACP---PGTFGERCGQQC----HCPGENQACH 1180

Query: 484  TTNETSNCCPFPEAVSC-------RDGLHC-----CPQGFHCSADGWSCLRRPDTKPSD- 624
              + T  C P      C       R G  C     C  G  C A   +C        +D 
Sbjct: 1181 PASGTCACAPGYHGAGCQQRCPPGRFGPGCELLCGCLNGGSCDAVTGACRCPAGFLGTDC 1240

Query: 625  DILCPNSQFHCPNSSTC-------CTMLDGSWGC------------CPMPQASCCGDKVH 747
             + CP+ +F    +  C       C  + GS  C            CP  +     +   
Sbjct: 1241 SLACPHGRFGPGCAYVCGCGQGAACDPVTGSCSCPPGRTGVHCEHGCPQNRFGVNCEHAC 1300

Query: 748  CCPHGTSCDLAHSRC---LTVTNTHPMAKIPSQETIKTAVQCPDAESQCHNNSTC----- 903
             C +G  C   +  C   L  T  H     P+    +    C   E  CHN+  C     
Sbjct: 1301 SCRNGGLCHATNGSCSCGLGWTGPHCELACPAG---RYGAAC-SLECSCHNHGACEPTSG 1356

Query: 904  -CKLSSGKYG------CCPLPNATCCSDHIHCCPHGFVCDPVKKKCFSKENEAIDFFTK- 1059
             C+   G YG      C P  +   C     C  HG  CDPV  +C         F  + 
Sbjct: 1357 ACRCGPGFYGQACEHSCPPGFHGAGCQQTCQC-QHGAPCDPVSGQCLCPAGLHGQFCERG 1415

Query: 1060 -----LPAHSVQEVKCDTKVSCPDDYTCCRLQSGKWGCC-------PFVQAVCCNDHVHC 1203
                       Q+  C+  V C      C    G+ G          F    C    +HC
Sbjct: 1416 CEPGSFGEGCGQQCDCELGVPCDPVTGHCLCPPGRTGTTCDLGCRRGFFGPGCA---LHC 1472

Query: 1204 -CPTGYQCNIKKGTC 1245
             C  G  C+   G C
Sbjct: 1473 SCGGGADCDPVSGQC 1487


>ref|XP_002685354.1| PREDICTED: low-density lipoprotein receptor-related protein 2-like
            [Bos taurus].
          Length = 4680

 Score = 53.5 bits (127), Expect = 4e-07
 Identities = 83/335 (24%), Positives = 113/335 (33%), Gaps = 59/335 (17%)
 Frame = +1

Query: 388  PVPDKWPKALSQHLGVPCKTKAQCPPGHSCILTTNE----TSNCCPFPEAVSCRDGLHCC 555
            PV      + S H G     + +C     C+  ++E    TSN    P A  C+   HC 
Sbjct: 1057 PVEQCGTLSFSCHNGRCVPLQYRCDGFDDCLDNSDEAQCTTSNATCSPLAFECKREGHCI 1116

Query: 556  PQGFHC--------SADGWSC-LRRPDTKPSDDILCPNSQFHCPNSSTCCTMLDGSWG-- 702
            P  + C         +D  +C  R P +  +D   C N+ F  P S  C T  D   G  
Sbjct: 1117 PSMWRCDGEDDCLDGSDEQNCPTRAPTSCRADQFTCDNN-FCIPRSWVCDTDNDCKDGSD 1175

Query: 703  --CCPMPQASCCGDKVHCCPHGTSCDLAHSRCLTVTNTHPMAK--IPSQETIKTAVQCPD 870
               C   Q +C   + HC  H         RC+ +T      K      + I   + C  
Sbjct: 1176 EKSCNYTQ-TCSPTQFHCPDH---------RCIALTFVCDGTKDCADGSDEIGCVINCTA 1225

Query: 871  AESQCHNNSTC------------CKLSSGKYGCCPLPNATCCSDHIHCCPHGFVCDPVKK 1014
            ++  C +N  C            C   S +  C   P   C  D   C   G +C P   
Sbjct: 1226 SQFTCVSNGQCISKTYRCDGVFDCDDHSDETDCPTRPPGMCHQDEFQCQEDG-ICIPKTW 1284

Query: 1015 KC--------FSKENEAIDFFTKLPAHSV--------QEVKCDTKVSCPD--DYTCCRLQ 1140
            +C         S E+      T  P+H V        +   CD    C D  D   C  Q
Sbjct: 1285 ECDGHEDCLQGSDEHNGCPPKTCHPSHFVCQNGNCIYRNWLCDGDNDCGDMSDEKDCPTQ 1344

Query: 1141 -----SGKWGC-----CPFVQAVCCNDHVHCCPTG 1215
                 S +W C     C  + AVC  D V  CP G
Sbjct: 1345 PFQCPSWQWQCPGHSICVNLSAVC--DGVSDCPGG 1377


>ref|XP_001788490.1| PREDICTED: low-density lipoprotein receptor-related protein 2-like,
            partial [Bos taurus].
          Length = 4579

 Score = 53.5 bits (127), Expect = 4e-07
 Identities = 83/335 (24%), Positives = 113/335 (33%), Gaps = 59/335 (17%)
 Frame = +1

Query: 388  PVPDKWPKALSQHLGVPCKTKAQCPPGHSCILTTNE----TSNCCPFPEAVSCRDGLHCC 555
            PV      + S H G     + +C     C+  ++E    TSN    P A  C+   HC 
Sbjct: 956  PVEQCGTLSFSCHNGRCVPLQYRCDGFDDCLDNSDEVQCTTSNATCSPLAFECKREGHCI 1015

Query: 556  PQGFHC--------SADGWSC-LRRPDTKPSDDILCPNSQFHCPNSSTCCTMLDGSWG-- 702
            P  + C         +D  +C  R P +  +D   C N+ F  P S  C T  D   G  
Sbjct: 1016 PSMWRCDGEDDCLDGSDEQNCPTRAPTSCRADQFTCDNN-FCIPRSWVCDTDNDCKDGSD 1074

Query: 703  --CCPMPQASCCGDKVHCCPHGTSCDLAHSRCLTVTNTHPMAK--IPSQETIKTAVQCPD 870
               C   Q +C   + HC  H         RC+ +T      K      + I   + C  
Sbjct: 1075 EKSCNYTQ-TCSPTQFHCPDH---------RCIALTFVCDGTKDCADGSDEIGCVINCTA 1124

Query: 871  AESQCHNNSTC------------CKLSSGKYGCCPLPNATCCSDHIHCCPHGFVCDPVKK 1014
            ++  C +N  C            C   S +  C   P   C  D   C   G +C P   
Sbjct: 1125 SQFTCVSNGQCISKTYRCDGVFDCDDHSDETDCPTRPPGMCHQDEFQCQEDG-ICIPKTW 1183

Query: 1015 KC--------FSKENEAIDFFTKLPAHSV--------QEVKCDTKVSCPD--DYTCCRLQ 1140
            +C         S E+      T  P+H V        +   CD    C D  D   C  Q
Sbjct: 1184 ECDGHEDCLQGSDEHNGCPPKTCHPSHFVCQNGNCIYRNWLCDGDNDCGDMSDEKDCPTQ 1243

Query: 1141 -----SGKWGC-----CPFVQAVCCNDHVHCCPTG 1215
                 S +W C     C  + AVC  D V  CP G
Sbjct: 1244 PFQCPSWQWQCPGHSICVNLSAVC--DGVSDCPGG 1276


>ref|NP_777131.1| SCO-spondin precursor [Bos taurus].
          Length = 5146

 Score = 52.8 bits (125), Expect = 7e-07
 Identities = 66/263 (25%), Positives = 86/263 (32%), Gaps = 39/263 (14%)
 Frame = +1

Query: 277  WVALVTGLVAGTQCPDGQLCPVACCLDPGGASYSCCNPVPDKWPKALSQHLGVPCKTKAQ 456
            W       V G  CP+G L     CL+P           P +W  +       P  T  Q
Sbjct: 1297 WPCRAVACVEGCFCPEGTLLHGGVCLEPAAC--------PCEWGGSF-----FPPGTVLQ 1343

Query: 457  CPPGHSCILTTNETSNCC---------PFPEAVSCRDGLHCCPQGFHCSADGWSCLRRPD 609
               G++C  T  E+   C         P P    C +G   C +  HC   GW C  + D
Sbjct: 1344 KDCGNNC--TCRESQWLCGDDGGRCVEPGP---GCAEGETPCRESGHCVPHGWLCDNQDD 1398

Query: 610  TKPSDD------ILCPNSQFHCPNSSTCCTML---DGSWGC--------CPMPQASCCGD 738
                 D       +C   Q  C  S  C  ++   DG   C        CP PQ S    
Sbjct: 1399 CGDGSDEEGCATRVCGEGQVSC-CSGRCLPLVLLCDGQDDCGDGMDEQGCPCPQDSLTCA 1457

Query: 739  KVHCCPHGTSCDLAHSRCLTVTNTHPMAKIPSQETIKTAVQCPDAESQCHNNSTC---CK 909
              HC P    CD  H  C    +         +E+    V C   E  C  + TC    +
Sbjct: 1458 DGHCLPPARLCD-GHPDCPDGAD---------EESCLGQVDCAPGEVSC-VDGTCLGAIQ 1506

Query: 910  LSSGKYGC----------CPLPN 948
            L  G + C          CPLP+
Sbjct: 1507 LCDGVWDCLDGGDEGPGHCPLPS 1529


>ref|XP_002707809.1| PREDICTED: hypothetical protein [Bos taurus].
          Length = 281

 Score = 51.6 bits (122), Expect = 2e-06
 Identities = 72/298 (24%), Positives = 89/298 (29%), Gaps = 14/298 (4%)
 Frame = +1

Query: 334  CPVACCLDPGGASYSCCNPVPDKWPKALSQHLGVPCKTKAQCPP-----------GHSCI 480
            C   CC  P     SCC P     P          C+T  + P            G SC 
Sbjct: 24   CVTTCC-QPTCCESSCCRPCCP--PTCYQSSENTCCRTTCRKPTCVTTCCQHNCGGSSCC 80

Query: 481  LTTNETSNCCPFPEAVSCRDGLHCCPQGFHCSADGWSCLRRPDTKP--SDDILCPNSQFH 654
                + S+C P     +C     CC  G    + G SC + P ++P       C  +   
Sbjct: 81   ----QPSSCAPVYCHRTCYHPTCCCLPGCRDQSCGSSCCQ-PCSRPVCCQTTCCRTTCCK 135

Query: 655  CPNSSTCCTMLDGSWGCCPMPQASCCGDKVHCCPHGTSCDLAHSRCLTVTNTHPMAKIPS 834
                +TCC        CC   ++SCC     CCP  T C     R      T        
Sbjct: 136  PTCVTTCCQPTCCGNTCC---ESSCCKP---CCPP-TCCQTTCCRTTCCRPTCVTTCCQP 188

Query: 835  QETIKTAVQCPDAESQC-HNNSTCCKLSSGKYGCCPLPNATCCSDHIHCCPHGFVCDPVK 1011
                K   Q    ES C H +S+C         C P+     C    +CC  G       
Sbjct: 189  SCCSKPCCQPTCCESICCHGSSSCGSSCCQASSCAPVYXHRTCYHPTYCCLPGCQDQSCG 248

Query: 1012 KKCFSKENEAIDFFTKLPAHSVQEVKCDTKVSCPDDYTCCRLQSGKWGCCPFVQAVCC 1185
              C                       C   VSC    TCCR  S    CC   Q  CC
Sbjct: 249  PSCCQ--------------------PCCRPVSCLT--TCCRTTSCHPSCC---QPSCC 281


  Database: RefSeq49_BP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 17,681,374
  Number of sequences in database:  33,088
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 55,914,058
Number of extensions: 1716339
Number of successful extensions: 8960
Number of sequences better than 1.0e-05: 14
Number of HSP's gapped: 8584
Number of HSP's successfully gapped: 23
Length of query: 449
Length of database: 17,681,374
Length adjustment: 105
Effective length of query: 344
Effective length of database: 14,207,134
Effective search space: 4887254096
Effective search space used: 4887254096
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

Search to RefSeqCP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-007159
         (1347 letters)

Database: RefSeq49_CP.fasta 
           33,336 sequences; 18,874,504 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_537620.2| PREDICTED: similar to granulin isoform 1 precur...   595   e-170
Alignment   gi|XP_531893.2| PREDICTED: similar to MEGF10 protein [Canis fam...    62   1e-09
Alignment   gi|XP_546739.2| PREDICTED: similar to EGF-like-domain, multiple...    59   8e-09
Alignment   gi|XP_542124.2| PREDICTED: similar to Fibrillin-3 precursor [Ca...    54   4e-07
Alignment   gi|XP_538847.2| PREDICTED: similar to Neurogenic locus notch ho...    52   1e-06
Alignment   gi|XP_535946.2| PREDICTED: similar to Low-density lipoprotein r...    49   8e-06

>ref|XP_537620.2| PREDICTED: similar to granulin isoform 1 precursor [Canis
            familiaris].
          Length = 642

 Score =  595 bits (1534), Expect = e-170
 Identities = 273/457 (59%), Positives = 310/457 (67%), Gaps = 16/457 (3%)
 Frame = +1

Query: 25   PSLQPESGQQDKSEEA*GWTPKKQVEPGVDALQGAA------GIGEERERATGQDWASSA 186
            PS +   GQ  +S         +   PG     G +      G  +    A G     + 
Sbjct: 36   PSSRGRKGQSPRSTHLALGRCSRCAAPGAQRAHGRSAAAQPVGARQPGRLANGNGGGRAV 95

Query: 187  LPGQETASWRWSLS*ES*PRRRWTMWTLVSWVALVTGLVAGTQCPDGQLCPVACCLDPGG 366
             P     S    L  E     R TMWTLVSWVALV GLVAGTQCPDGQ CPVACCLDPGG
Sbjct: 96   APQALVPSCPARLRSERGAGHRQTMWTLVSWVALVAGLVAGTQCPDGQFCPVACCLDPGG 155

Query: 367  ASYSCCNPVPDKWPKALSQHLGVPCKTKAQCPPGHSCILTTNETSNCCPFPEAVSCRDGL 546
            ASYSCCNP+P KWP  LS+HLG PC+  A C PG+SC+LT   TS+CCPFPEAVSC DG 
Sbjct: 156  ASYSCCNPIPGKWPTELSRHLGRPCQLDAHCSPGYSCLLTILGTSSCCPFPEAVSCADGR 215

Query: 547  HCCPQGFHCSADGWSCLRRPDTK---------PSDDILCPNSQFHCPNSSTCCTMLDGSW 699
            HCCP+G+HCSADG SC +R             P   I CP+SQF CPNSSTCCTMLDGSW
Sbjct: 216  HCCPRGYHCSADGRSCFQRSGAAGVETGLWGFPLGAIQCPDSQFLCPNSSTCCTMLDGSW 275

Query: 700  GCCPMPQASCCGDKVHCCPHGTSCDLAHSRCLTVTNTHPMA-KIPSQETIKTAVQCPDAE 876
            GCCPMPQASCC DKVHCCPHGTSCDLAH+RCLT T +HP+A KIP+Q + +  V CPD  
Sbjct: 276  GCCPMPQASCCEDKVHCCPHGTSCDLAHARCLTATGSHPLAKKIPAQRSNRAGVICPDGR 335

Query: 877  SQCHNNSTCCKLSSGKYGCCPLPNATCCSDHIHCCPHGFVCDPVKKKCFSKENEAIDFFT 1056
            SQC + STCC+L SGKYGCCP+P+A CCSDH+HCCP   VCD V+ KC SKEN A D  T
Sbjct: 336  SQCPDGSTCCELPSGKYGCCPMPHAICCSDHLHCCPQDTVCDLVRSKCLSKEN-ATDLLT 394

Query: 1057 KLPAHSVQEVKCDTKVSCPDDYTCCRLQSGKWGCCPFVQAVCCNDHVHCCPTGYQCNIKK 1236
            KLPAH+VQEVKCD +VSCPD YTCCRLQSG WGCCPF QAVCC DHVHCCP G++C+  K
Sbjct: 395  KLPAHTVQEVKCDMEVSCPDGYTCCRLQSGAWGCCPFAQAVCCEDHVHCCPAGFKCDTAK 454

Query: 1237 GTCDLETQWVPWKEENPXSLXPAELLASGKDVPCDNV 1347
            GTC+     +PW  + P  L      A+  DVPCDNV
Sbjct: 455  GTCEQNAPQMPWMVQAPARLQLLNPQATENDVPCDNV 491



 Score =  242 bits (617), Expect = 7e-64
 Identities = 129/346 (37%), Positives = 170/346 (49%), Gaps = 27/346 (7%)
 Frame = +1

Query: 316  CPDGQLCPVAC--CLDPGGASYSCCNPVPDKWPKALSQHLGVPCKT-KAQCPPGHSCILT 486
            CP G  C +A   CL   G+     +P+  K P   S   GV C   ++QCP G +C   
Sbjct: 293  CPHGTSCDLAHARCLTATGS-----HPLAKKIPAQRSNRAGVICPDGRSQCPDGSTCCEL 347

Query: 487  TNETSNCCPFPEAVSCRDGLHCCPQGFHCSADGWSCLRRPDTKPS---------DDILCP 639
             +    CCP P A+ C D LHCCPQ   C      CL + +              ++ C 
Sbjct: 348  PSGKYGCCPMPHAICCSDHLHCCPQDTVCDLVRSKCLSKENATDLLTKLPAHTVQEVKC- 406

Query: 640  NSQFHCPNSSTCCTMLDGSWGCCPMPQASCCGDKVHCCPHGTSCDLAHSRCLTVTNTHP- 816
            + +  CP+  TCC +  G+WGCCP  QA CC D VHCCP G  CD A   C       P 
Sbjct: 407  DMEVSCPDGYTCCRLQSGAWGCCPFAQAVCCEDHVHCCPAGFKCDTAKGTCEQNAPQMPW 466

Query: 817  MAKIPSQ------ETIKTAVQCPDAESQCHNNSTCCKLSSGKYGCCPLPNATCCSDHIHC 978
            M + P++      +  +  V C +  S C +++TCC+L SG++GCCP P A CC D  HC
Sbjct: 467  MVQAPARLQLLNPQATENDVPCDNVTS-CPSSNTCCRLMSGEWGCCPAPEAVCCEDRQHC 525

Query: 979  CPHGFVCDPVKKKCFSKENEAIDFFTKL---PAHSVQEVKCDTKVSCP-----DDYTCCR 1134
            CP G+ C+ VK +   KE ++     +L   P   V  VKC      P     D+ TCCR
Sbjct: 526  CPAGYTCN-VKARSCEKEADSTHLAVRLARGPRVGVGNVKCGEGHLPPAPTHHDNQTCCR 584

Query: 1135 LQSGKWGCCPFVQAVCCNDHVHCCPTGYQCNIKKGTCDLETQWVPW 1272
               G W CCP+ Q VCC D  HCCPTG+ C   KGT  L  + + W
Sbjct: 585  DSRGGWACCPYHQGVCCADQRHCCPTGFHCG-AKGTKCLRRESLRW 629



 Score =  176 bits (446), Expect = 5e-44
 Identities = 102/315 (32%), Positives = 137/315 (43%), Gaps = 60/315 (19%)
 Frame = +1

Query: 304  AGTQCPDGQL-CP--VACCLDPGGASYSCCNPVPDKW-------------------PKAL 417
            AG  CPDG+  CP    CC  P G  Y CC P+P                       K L
Sbjct: 327  AGVICPDGRSQCPDGSTCCELPSG-KYGCC-PMPHAICCSDHLHCCPQDTVCDLVRSKCL 384

Query: 418  SQHLG--------------VPCKTKAQCPPGHSCILTTNETSNCCPFPEAVSCRDGLHCC 555
            S+                 V C  +  CP G++C    +    CCPF +AV C D +HCC
Sbjct: 385  SKENATDLLTKLPAHTVQEVKCDMEVSCPDGYTCCRLQSGAWGCCPFAQAVCCEDHVHCC 444

Query: 556  PQGFHCSADGWSCLRRPDTKP-----------------SDDILCPNSQFHCPNSSTCCTM 684
            P GF C     +C +     P                  +D+ C N    CP+S+TCC +
Sbjct: 445  PAGFKCDTAKGTCEQNAPQMPWMVQAPARLQLLNPQATENDVPCDNVT-SCPSSNTCCRL 503

Query: 685  LDGSWGCCPMPQASCCGDKVHCCPHGTSCDLAHSRC-LTVTNTHPMAKIPSQETIKTA-V 858
            + G WGCCP P+A CC D+ HCCP G +C++    C     +TH   ++     +    V
Sbjct: 504  MSGEWGCCPAPEAVCCEDRQHCCPAGYTCNVKARSCEKEADSTHLAVRLARGPRVGVGNV 563

Query: 859  QC-----PDAESQCHNNSTCCKLSSGKYGCCPLPNATCCSDHIHCCPHGFVCDPVKKKCF 1023
            +C     P A +  H+N TCC+ S G + CCP     CC+D  HCCP GF C     KC 
Sbjct: 564  KCGEGHLPPAPTH-HDNQTCCRDSRGGWACCPYHQGVCCADQRHCCPTGFHCGAKGTKCL 622

Query: 1024 SKENEAIDFFTKLPA 1068
             +E+   D   + PA
Sbjct: 623  RRESLRWDMPLRDPA 637


>ref|XP_531893.2| PREDICTED: similar to MEGF10 protein [Canis familiaris].
          Length = 1548

 Score = 62.0 bits (149), Expect = 1e-09
 Identities = 83/352 (23%), Positives = 118/352 (33%), Gaps = 41/352 (11%)
 Frame = +1

Query: 313  QCPDGQ-LCPVACCLDPGGASYSCCNPVPDKWPKALSQHLGVPCKTKAQCPPGHSCILTT 489
            +C  G+ + P  C  +PG    +C +            H G  C ++ QC  G  C    
Sbjct: 523  KCVHGRCIAPNTCQCEPGWGGTNCSSACD-------GDHWGPHCSSRCQCKNGALC---- 571

Query: 490  NETSNCCPFPEAVSCRDGLHCCPQGFHCSADGWSCLRRPD--TKPSDDILCPNSQFHCPN 663
            N  +  C              C  GF     GW C  R +  T  +D   C + +  C N
Sbjct: 572  NPITGACH-------------CAAGFR----GWRCEDRCEQGTYGND---C-HQRCQCQN 610

Query: 664  SSTCCTMLDGSWGCCPMPQASCCGDKVHCCPHGTSCDLAHSRCLTVTNTHPM---AKIPS 834
             +T C  + G   C P    + C D      HG  C+     C      H +      PS
Sbjct: 611  GAT-CDHVTGECRCPPGYTGAFCEDLCPPGKHGPQCE-QRCPCQNGGICHHVTGECSCPS 668

Query: 835  QETIKTAVQ-CPDA--------ESQCHNNSTCCKLSSGKYGCCPLPNATCCSDH------ 969
                    Q CP+         E QCHN  T C  ++G+  C P      C D       
Sbjct: 669  GWLGTVCGQPCPEGRFGKNCSQECQCHNGGT-CDAATGQCHCSPGYTGERCQDECPVGTY 727

Query: 970  -IHC-----CPHGFVCDPVKKKCFSKENEAIDFF-TKLPAHSVQEVKCDTKVSCPDDYT- 1125
             + C     C +G  C  V   C  +   A +    +L    +  +KCD +  C  D T 
Sbjct: 728  GVRCAETCQCVNGGKCYHVSGSCLCEAGFAGEHCEARLCPEGLYGIKCDKRCPCHLDNTH 787

Query: 1126 CCRLQSGKWGCCPFVQAVCCND------------HVHCCPTGYQCNIKKGTC 1245
             C   SG+  C P    + CN+             +  C  G  C+   G C
Sbjct: 788  SCHPMSGECACKPGWSGLYCNETCSPGFFGEACQQICSCHNGADCDSVTGKC 839



 Score = 57.8 bits (138), Expect = 2e-08
 Identities = 101/399 (25%), Positives = 130/399 (32%), Gaps = 74/399 (18%)
 Frame = +1

Query: 313  QCPDGQLC-PV--ACCLDPGGASYSCCNPVPDKWPKALSQHLGVPCKTKAQCPPGHSCIL 483
            QC +G LC P+  AC    G   + C     D+  +      G  C  + QC  G +C  
Sbjct: 564  QCKNGALCNPITGACHCAAGFRGWRC----EDRCEQGT---YGNDCHQRCQCQNGATCDH 616

Query: 484  TTNETSNCCPFPEAVSCRDGLHCCPQGFHCSADGWSCLRRPDTK--------------PS 621
             T E   C P      C D    CP G H    G  C +R   +              PS
Sbjct: 617  VTGEC-RCPPGYTGAFCED---LCPPGKH----GPQCEQRCPCQNGGICHHVTGECSCPS 668

Query: 622  DDI------LCPNSQF--------HCPNSSTCCTMLDGSWGCCPMPQASCCGDK------ 741
              +       CP  +F         C N  TC     G   C P      C D+      
Sbjct: 669  GWLGTVCGQPCPEGRFGKNCSQECQCHNGGTC-DAATGQCHCSPGYTGERCQDECPVGTY 727

Query: 742  -VHC-----CPHGTSCDLAHSRCLT---VTNTHPMAKIPSQET--IKTAVQCPDAESQCH 888
             V C     C +G  C      CL        H  A++  +    IK   +CP     CH
Sbjct: 728  GVRCAETCQCVNGGKCYHVSGSCLCEAGFAGEHCEARLCPEGLYGIKCDKRCP-----CH 782

Query: 889  -NNSTCCKLSSGKYGCCP-----LPNATC-------CSDHIHCCPHGFVCDPVKKKCFSK 1029
             +N+  C   SG+  C P       N TC           I  C +G  CD V  KC   
Sbjct: 783  LDNTHSCHPMSGECACKPGWSGLYCNETCSPGFFGEACQQICSCHNGADCDSVTGKCICA 842

Query: 1030 EN-EAIDFFTKLPAHSVQEVKCDTKVSCPDDYTC------CRLQSGKWGC-----CPF-V 1170
               + ID     P  +   + C +   C +D  C      C  ++G  G      CP   
Sbjct: 843  PGFKGIDCSIPCPLETYG-INCSSLCGCKNDAVCSPVDGSCTCKAGWHGVDCSISCPSGT 901

Query: 1171 QAVCCNDHVHCCPTGYQCNIKKGTCDLETQWVPWKEENP 1287
                CN    C   G  CN + GTC     W   K E P
Sbjct: 902  WGFSCNLTCQCLHGG-ACNTQDGTCTCAPGWRGDKCELP 939


>ref|XP_546739.2| PREDICTED: similar to EGF-like-domain, multiple 3 [Canis familiaris].
          Length = 1534

 Score = 59.3 bits (142), Expect = 8e-09
 Identities = 77/343 (22%), Positives = 104/343 (30%), Gaps = 39/343 (11%)
 Frame = +1

Query: 343  ACCLDPGGASYSCCNPVPDKWPKALSQHLGVPCKTKAQCPPGHSCILTTNETSNCCPFPE 522
            AC   PG     C N  P  W        G  C  + QCPPG +C   T E         
Sbjct: 1112 ACLCPPGWRGSRCENACPHGW-------FGEACAQRCQCPPGAACHHVTGE--------- 1155

Query: 523  AVSCRDGLHCCPQGFHCSADGWSCLRRPDTKPSDDILCPNSQF--------HCPNSSTCC 678
               CR     CP+GF              T P  +  CP   F        HCP  +  C
Sbjct: 1156 ---CR-----CPRGF--------------TGPGCEQACPPGTFGESCGQKCHCPGENQAC 1193

Query: 679  TMLDGSWGCCPMPQASCC-----------GDKVHC-CPHGTSCDLAHSRCLTVTNTHPMA 822
                G+  C      S C           G +  C C +G SCD A   CL      P  
Sbjct: 1194 HPALGTCVCAAGYHGSGCRQRCPPGRFGPGCEQPCGCLNGGSCDAATGACLC-----PAG 1248

Query: 823  KIPSQETIKTAVQCPDAE--SQCHNNSTC-----CKLSSGKYGCCPLPNATCCS------ 963
             + +      ++ CP       C +   C     C   +G   C P    T C       
Sbjct: 1249 FLGAD----CSLSCPQGHFGPGCAHVCGCGQAVTCDPVTGSCACPPGTTGTHCEHGCPQN 1304

Query: 964  ------DHIHCCPHGFVCDPVKKKCFSKENEAIDFFTKLPAHSVQEVKCDTKVSCPDDYT 1125
                  +H+  C +G +C      C            +          C  + SC ++ T
Sbjct: 1305 RFGVNCEHVCSCRNGGLCHASDGSCSCGLGWTGPNCEQACPPGHYGAACRLECSCQNNGT 1364

Query: 1126 CCRLQSGKWGCCPFVQAVCCNDHVHCCPTGYQCNIKKGTCDLE 1254
             C   +G   C P      C    H CP G+     +  C+ +
Sbjct: 1365 -CEPTTGACRCGPGFYGQACQ---HACPPGFHGAGCRAACECQ 1403



 Score = 53.5 bits (127), Expect = 4e-07
 Identities = 97/415 (23%), Positives = 122/415 (29%), Gaps = 84/415 (20%)
 Frame = +1

Query: 292  TGLVAGTQCPDG-------QLCPV------------ACCLDPGGASYSCCNPVPDKWPKA 414
            TG   G  CP+G       ++CP             AC   PG     C +  P  W   
Sbjct: 731  TGDDCGADCPEGRWGLGCQEICPACEHGAACEPGTGACLCRPGYVGSRCQDTCPAGW--- 787

Query: 415  LSQHLGVPCKTKAQCPPGHSCILTTNETSNCCPFPEAVSCR----------DGLH---CC 555
                 G  C+ +  C     C   T   S C P    +SC+          D  H   C 
Sbjct: 788  ----FGPGCQMRCSCANDGLCHPVTGHCS-CAPGWTGLSCQRACDGGRWGPDCSHPCTCS 842

Query: 556  PQGFHCSADGWSCLRRPD-TKPSDDILCPNSQF--------HCPNSSTC------CTMLD 690
            P    C A    C+     T P  +  CP   F         C + + C      CT   
Sbjct: 843  PGHGSCDAVSGLCVCEAGYTGPRCEQRCPQGHFGPGCGRQCQCEHGAACDHVSGACTCPA 902

Query: 691  GSWGC-----CPMPQASCCGDKVHCCPHGTSCDLAHSRCLTVTN-----------THPMA 822
            G  G      CP          V  C  G  CD     CL                H   
Sbjct: 903  GWRGALCERACPAGFFGLDCRGVCDCAAGAPCDSVSGSCLCPAGRQGPRCDQACPAHTYG 962

Query: 823  KIPSQE-TIKTAVQCPDAESQCH-----NNSTCCKLSSGKYGCCPLPNATCCSDHIHCCP 984
               SQ  +      C     QCH       STC +        CP  +      H   C 
Sbjct: 963  HNCSQTCSCFNGASCDPVHGQCHCGPGWMGSTCLE-------ACPTGSYGQNCQHTCLCQ 1015

Query: 985  HGFVCDPVKKKC--------FSKENEAI-DFFTKLPAHSVQEVK---CDTKVS---CPDD 1119
            HG  CDPV   C         + E E +   F     HS + +    CD +     CP  
Sbjct: 1016 HGGTCDPVSGHCTCPEGWTGLACEEECLPGRFGAGCKHSCRCLNGGDCDRRSGRCLCPAG 1075

Query: 1120 YTCCRLQSGKWGCCPFVQAVCCNDHVHCCPTGYQCNIKKGTCDLETQWVPWKEEN 1284
            +T  + QS    C      V C +H   C  G  C+   G C     W   + EN
Sbjct: 1076 WTGDQCQS---LCAEGTFGVRCEEHC-ACRRGATCHHVTGACLCPPGWRGSRCEN 1126


>ref|XP_542124.2| PREDICTED: similar to Fibrillin-3 precursor [Canis familiaris].
          Length = 2801

 Score = 53.5 bits (127), Expect = 4e-07
 Identities = 79/307 (25%), Positives = 101/307 (32%), Gaps = 43/307 (14%)
 Frame = +1

Query: 448  KAQCPPGHSCILTTNETSNCCPFPEAVSCRDGLHCCPQGFHC----SADGWSCLRRPDTK 615
            K QCPPGH+  LT  +T+  C   +  S  D L  CP G HC     A   SC     + 
Sbjct: 1089 KCQCPPGHA--LTAKDTA--CEDVDECSLSDSL--CPHG-HCVNVIGAFQCSCHAGFQST 1141

Query: 616  PSDDILCPNSQFHCPNS--STCCTMLDGSWGC------CPMPQASCCGDKVHCCPHGTSC 771
            P        ++ H  N      CT  +GS+ C        MP    C D   C  +   C
Sbjct: 1142 PDRQGCMDINECHSGNGGCDVHCTNTEGSYRCGCGHGYSLMPNGRACADVDECAENPDIC 1201

Query: 772  DLAHSRCLTVTNTHPMAKIPSQETIKTAVQCPDAESQCHNNSTC----CKLSSGKYGC-C 936
            D    +C  V   H             +  C D      N   C    C+ + G + C C
Sbjct: 1202 D--GGQCANVPGGHHCLCYDGFMATPDSRTCIDVNECDLNPHICLHGDCENTKGSFVCHC 1259

Query: 937  P-----LPNATCCSDHIHCCPHGFVCD--------PVKKKCFSKENEAIDFFT--KLPAH 1071
                     AT CSD   C   G  CD        P    C  +     D F    L   
Sbjct: 1260 QRGYVIRKGATGCSDVDECELGGHSCDSHASCLNVPGSFSCRCQPGWVGDGFACHDLDEC 1319

Query: 1072 SVQEVKCDTKVSC---PDDYTC-CR--LQSGKWGC-----CPFVQAVCCNDHVHCCPTGY 1218
            +  E  C  +  C   P  Y C CR       + C     C     +C N      P GY
Sbjct: 1320 AFWEHGCSLRADCLNVPGSYRCVCRQGFMGDGFSCEDRDECAEDVDLCENGQCLNAPGGY 1379

Query: 1219 QCNIKKG 1239
            +C  + G
Sbjct: 1380 RCECEMG 1386


>ref|XP_538847.2| PREDICTED: similar to Neurogenic locus notch homolog protein 4
            precursor (Notch 4) (hNotch4) [Canis familiaris].
          Length = 1778

 Score = 52.4 bits (124), Expect = 1e-06
 Identities = 90/394 (22%), Positives = 124/394 (31%), Gaps = 83/394 (21%)
 Frame = +1

Query: 307  GTQCPDGQLCPVACCLDPGGASYSCCNPVPDKWPKALSQHLGVPCKTKAQCPPGHS---C 477
            G+ C D  L     CL P G     C    D+   A       PC  +A C  G +   C
Sbjct: 481  GSTCLD--LLATFHCLCPPGLEGQFCEVETDECASA-------PCLNQADCHDGLNSFLC 531

Query: 478  ILTTNETSNCC----------PFPEAVSCRD---GLHC-CPQGF---HCSADGWSCLRRP 606
            +     T + C          P      C+D     HC C  GF   HC A+   CL  P
Sbjct: 532  VCLPGFTGSQCEEDINECASSPCANGGQCQDQPGSFHCECLPGFEGPHCQAEVDECLSGP 591

Query: 607  --------DTKPSDDILCPN------------SQFHCPNSSTC-----CTMLDGSWGCCP 711
                    D   +   LCP+            +   C     C     C   DGS GC P
Sbjct: 592  CPTGASCLDLPGAFSCLCPSGFTGHLCEVPLCAPSLCQPKQKCQDKAHCLCPDGSPGCAP 651

Query: 712  MPQASCCGDKVHC------CP---HGTSCDLAHSRCLTVTNTHPMAKIPSQETIK----- 849
            + + +C     HC      C     G +C+     C++V   H     P           
Sbjct: 652  I-EDNCTCHHGHCQRSSCVCDVGWTGPACEAELGGCISVPCAHGGTCHPQPSGYNCTCPP 710

Query: 850  --TAVQCPDAESQCHN----NSTCCKLSSGKYGCCPLPNAT---CCSDHIHC----CPHG 990
              T   C +  + CH+    N   C  S   Y C   P+ T   C +   HC    C +G
Sbjct: 711  GHTGPTCSEEVTACHSGPCLNGGSCSPSPRGYSCTCPPSHTGPRCQTSTDHCASAPCLNG 770

Query: 991  FVC--DPVKKKCFSKENEAIDFFTKLPAHSVQEVKCDTKVSC---PDDYTCCRLQSGKWG 1155
              C   P    C            +    S  +  C  + +C   P    C        G
Sbjct: 771  GACVNRPGTSSCLCAAGFQGPHCEERTRPSCADNPCRNRATCQDGPQGPHCLCSPGYTGG 830

Query: 1156 CCPFVQAVC----CNDHVHCCPTG--YQCNIKKG 1239
             C  +  +C    C  + +C  TG  +QC   +G
Sbjct: 831  TCQTLMDLCAQKPCPHNSYCLQTGPSFQCLCLQG 864



 Score = 51.2 bits (121), Expect = 2e-06
 Identities = 90/383 (23%), Positives = 123/383 (32%), Gaps = 83/383 (21%)
 Frame = +1

Query: 316  CPDGQLCPVACCLDPGGASYSC------CNPVPDKWPKALSQHLGV----PCKTKAQCPP 465
            C  G     +C  D G    +C      C  VP         H G     P      CPP
Sbjct: 658  CHHGHCQRSSCVCDVGWTGPACEAELGGCISVP-------CAHGGTCHPQPSGYNCTCPP 710

Query: 466  GHSCILTTNETS-----------NCCPFPEAVSC-----RDGLHCCPQGFHCSA----DG 585
            GH+    + E +           +C P P   SC       G  C     HC++    +G
Sbjct: 711  GHTGPTCSEEVTACHSGPCLNGGSCSPSPRGYSCTCPPSHTGPRCQTSTDHCASAPCLNG 770

Query: 586  WSCLRRPDTKPSDDILC------PNSQFH---------CPNSSTC--------CTMLDGS 696
             +C+ RP T      LC      P+ +           C N +TC        C    G 
Sbjct: 771  GACVNRPGT---SSCLCAAGFQGPHCEERTRPSCADNPCRNRATCQDGPQGPHCLCSPGY 827

Query: 697  WGCCPMPQASCCGDKVHCCPHGTSC--DLAHSRCLTVTN-THPMAKIPSQETIKTAV-QC 864
             G         C  K   CPH + C       +CL +   T P+  +P     K A+ Q 
Sbjct: 828  TGGTCQTLMDLCAQKP--CPHNSYCLQTGPSFQCLCLQGWTGPLCNLPLSFCQKAALSQG 885

Query: 865  PDAESQCHNNSTCCKLSSGKYGCCPLP-NATCCSDHIHCC--------------PHGFVC 999
              A S C N   C    S  +  CP     + C D ++ C              P+G++C
Sbjct: 886  TAASSLCQNGGLCIDSGSSYFCHCPPGFQGSTCQDRVNPCESRPCQHGATCIAQPNGYLC 945

Query: 1000 DPVK----KKCFSKENEAIDFFTKLPAHSVQEVKCDTKVSCPDDYTCCRLQSGKWGCCP- 1164
                    + C SKE+ A                C ++  C +  TC     G +  CP 
Sbjct: 946  QCAPGYNGQNC-SKESNA----------------CQSQ-PCHNHGTCTPKPGGYYCTCPP 987

Query: 1165 -FVQAVCCNDHVHCC-----PTG 1215
             FV   C  D   C      PTG
Sbjct: 988  GFVGLRCEGDVDECLDRPCHPTG 1010


>ref|XP_535946.2| PREDICTED: similar to Low-density lipoprotein receptor-related
            protein 2 precursor (Megalin) (Glycoprotein 330) (gp330)
            [Canis familiaris].
          Length = 4646

 Score = 49.3 bits (116), Expect = 8e-06
 Identities = 73/284 (25%), Positives = 99/284 (34%), Gaps = 54/284 (19%)
 Frame = +1

Query: 538  DGLHC-CPQGFHC--SADGWSCLRRPDTKPSDDILCPNSQFHCPNSSTCCTM---LDGSW 699
            +G  C CP  FH     D   CL R          C ++QF C NS  C  +    DG  
Sbjct: 3483 NGFTCECPDDFHTLRMGDMNICLPR----------CSSTQFLCANSEKCIPIWWKCDGQR 3532

Query: 700  GC---------CPM----------PQASCCGDKVHC-----CPHGTSCD---LAHSRCLT 798
             C         CP              +C      C     CP G+  D     H RC  
Sbjct: 3533 DCSDGSDEPVLCPQRYCRLGQFQCKDGNCTSSHFLCNAHQDCPDGSDEDQILCEHHRC-- 3590

Query: 799  VTNTHPMAKIPSQETIKTAVQCPDAESQCHNNSTCCKLSSGKYGCCP---LPNATCCSDH 969
             +N    A   ++  I  A +C D+E+ C +NS         Y C      P    C+++
Sbjct: 3591 ESNEWQCA---NKRCIPEAWRC-DSENDCGDNS-----DEDVYNCASRICQPGYFKCANN 3641

Query: 970  IHCCPHGFVCDPVKKKCFSKENEAIDFFTKLPAHSVQEVKCD--TKVSCPDDYTC----- 1128
             HC P  + CD V   C    +E        P       +CD  T+ SC  +Y C     
Sbjct: 3642 -HCIPQDWKCD-VDNDCGDYSDE--------PMPECMSHRCDNHTEFSCRTNYRCIPQWS 3691

Query: 1129 -------CRLQSGKWGC----CPFVQAVCCNDHVHCCPTGYQCN 1227
                   CR  S + GC    C       CN+H  C P  ++C+
Sbjct: 3692 VCNGFDDCRDNSDEQGCEERTCKPSGEFRCNNH-RCIPLRWRCD 3734


  Database: RefSeq49_CP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,874,504
  Number of sequences in database:  33,336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 57,995,945
Number of extensions: 1735079
Number of successful extensions: 8194
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 7953
Number of HSP's successfully gapped: 12
Length of query: 449
Length of database: 18,874,504
Length adjustment: 106
Effective length of query: 343
Effective length of database: 15,340,888
Effective search space: 5261924584
Effective search space used: 5261924584
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

Search to RefSeqHP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-007159
         (1347 letters)

Database: RefSeq49_HP.fasta 
           32,964 sequences; 18,297,164 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_002078.1| granulins precursor [Homo sapiens].                  578   e-165
Alignment   gi|NP_941965.2| keratin-associated protein 10-11 [Homo sapiens].      61   3e-09
Alignment   gi|NP_941964.2| keratin-associated protein 10-1 [Homo sapiens].       59   1e-08
Alignment   gi|NP_115822.1| multiple epidermal growth factor-like domains p...    58   2e-08
Alignment   gi|NP_061027.2| low-density lipoprotein receptor-related protei...    55   1e-07
Alignment   gi|NP_941962.1| keratin-associated protein 10-7 [Homo sapiens].       54   3e-07
Alignment   gi|NP_004516.2| low-density lipoprotein receptor-related protei...    54   4e-07
Alignment   gi|NP_941961.2| keratin-associated protein 10-6 [Homo sapiens].       52   1e-06
Alignment   gi|NP_941960.1| keratin-associated protein 10-4 [Homo sapiens].       52   1e-06
Alignment   gi|NP_115823.3| fibrillin-3 precursor [Homo sapiens].                 51   2e-06

>ref|NP_002078.1| granulins precursor [Homo sapiens].
          Length = 593

 Score =  578 bits (1490), Expect = e-165
 Identities = 243/369 (65%), Positives = 282/369 (76%), Gaps = 6/369 (1%)
 Frame = +1

Query: 259  MWTLVSWVALVTGLVAGTQCPDGQLCPVACCLDPGGASYSCCNPVPDKWPKALSQHLGVP 438
            MWTLVSWVAL  GLVAGT+CPDGQ CPVACCLDPGGASYSCC P+ DKWP  LS+HLG P
Sbjct: 1    MWTLVSWVALTAGLVAGTRCPDGQFCPVACCLDPGGASYSCCRPLLDKWPTTLSRHLGGP 60

Query: 439  CKTKAQCPPGHSCILTTNETSNCCPFPEAVSCRDGLHCCPQGFHCSADGWSCLRRPDTKP 618
            C+  A C  GHSCI T + TS+CCPFPEAV+C DG HCCP+GFHCSADG SC +R     
Sbjct: 61   CQVDAHCSAGHSCIFTVSGTSSCCPFPEAVACGDGHHCCPRGFHCSADGRSCFQRSGNNS 120

Query: 619  SDDILCPNSQFHCPNSSTCCTMLDGSWGCCPMPQASCCGDKVHCCPHGTSCDLAHSRCLT 798
               I CP+SQF CP+ STCC M+DGSWGCCPMPQASCC D+VHCCPHG  CDL H+RC+T
Sbjct: 121  VGAIQCPDSQFECPDFSTCCVMVDGSWGCCPMPQASCCEDRVHCCPHGAFCDLVHTRCIT 180

Query: 799  VTNTHPMA-KIPSQET-----IKTAVQCPDAESQCHNNSTCCKLSSGKYGCCPLPNATCC 960
             T THP+A K+P+Q T     + ++V CPDA S+C + STCC+L SGKYGCCP+PNATCC
Sbjct: 181  PTGTHPLAKKLPAQRTNRAVALSSSVMCPDARSRCPDGSTCCELPSGKYGCCPMPNATCC 240

Query: 961  SDHIHCCPHGFVCDPVKKKCFSKENEAIDFFTKLPAHSVQEVKCDTKVSCPDDYTCCRLQ 1140
            SDH+HCCP   VCD ++ KC SKEN   D  TKLPAH+V +VKCD +VSCPD YTCCRLQ
Sbjct: 241  SDHLHCCPQDTVCDLIQSKCLSKENATTDLLTKLPAHTVGDVKCDMEVSCPDGYTCCRLQ 300

Query: 1141 SGKWGCCPFVQAVCCNDHVHCCPTGYQCNIKKGTCDLETQWVPWKEENPXSLXPAELLAS 1320
            SG WGCCPF QAVCC DH+HCCP G+ C+ +KGTC+     VPW E+ P  L   +  A 
Sbjct: 301  SGAWGCCPFTQAVCCEDHIHCCPAGFTCDTQKGTCEQGPHQVPWMEKAPAHLSLPDPQAL 360

Query: 1321 GKDVPCDNV 1347
             +DVPCDNV
Sbjct: 361  KRDVPCDNV 369



 Score =  255 bits (651), Expect = 8e-68
 Identities = 132/376 (35%), Positives = 178/376 (47%), Gaps = 35/376 (9%)
 Frame = +1

Query: 316  CPDGQLCPVAC--CLDPGGASYSCCNPVPDKWP-----KALSQHLGVPCK-TKAQCPPGH 471
            CP G  C +    C+ P G      +P+  K P     +A++    V C   +++CP G 
Sbjct: 165  CPHGAFCDLVHTRCITPTGT-----HPLAKKLPAQRTNRAVALSSSVMCPDARSRCPDGS 219

Query: 472  SCILTTNETSNCCPFPEAVSCRDGLHCCPQGFHCSADGWSCLRRPDTKPS---------- 621
            +C    +    CCP P A  C D LHCCPQ   C      CL + +              
Sbjct: 220  TCCELPSGKYGCCPMPNATCCSDHLHCCPQDTVCDLIQSKCLSKENATTDLLTKLPAHTV 279

Query: 622  DDILCPNSQFHCPNSSTCCTMLDGSWGCCPMPQASCCGDKVHCCPHGTSCDLAHSRCLTV 801
             D+ C + +  CP+  TCC +  G+WGCCP  QA CC D +HCCP G +CD     C   
Sbjct: 280  GDVKC-DMEVSCPDGYTCCRLQSGAWGCCPFTQAVCCEDHIHCCPAGFTCDTQKGTCEQG 338

Query: 802  TNTHPMAK-------IPSQETIKTAVQCPDAESQCHNNSTCCKLSSGKYGCCPLPNATCC 960
             +  P  +       +P  + +K  V C D  S C ++ TCC+L+SG++GCCP+P A CC
Sbjct: 339  PHQVPWMEKAPAHLSLPDPQALKRDVPC-DNVSSCPSSDTCCQLTSGEWGCCPIPEAVCC 397

Query: 961  SDHIHCCPHGFVCDPVKKKCFSKENEAIDFFTKLPAHSV-----QEVKCDTKVSCPDDYT 1125
            SDH HCCP G+ C  V +    + +E +    K+PA        +++ CD   SCP   T
Sbjct: 398  SDHQHCCPQGYTC--VAEGQCQRGSEIVAGLEKMPARRASLSHPRDIGCDQHTSCPVGQT 455

Query: 1126 CCRLQSGKWGCCPFVQAVCCNDHVHCCPTGYQCNIKKGTCDLETQWVPWKEENPXSLXPA 1305
            CC    G W CC    AVCC D  HCCP GY CN+K  +C+ E            S  PA
Sbjct: 456  CCPSLGGSWACCQLPHAVCCEDRQHCCPAGYTCNVKARSCEKEV----------VSAQPA 505

Query: 1306 ELLASG-----KDVPC 1338
              LA       KDV C
Sbjct: 506  TFLARSPHVGVKDVEC 521



 Score =  232 bits (592), Expect = 5e-61
 Identities = 121/368 (32%), Positives = 164/368 (44%), Gaps = 54/368 (14%)
 Frame = +1

Query: 304  AGTQCPDGQLC------PVACCLDPGGASYS----CC-----------------NPVPDK 402
            A ++CPDG  C         CC  P     S    CC                 N   D 
Sbjct: 211  ARSRCPDGSTCCELPSGKYGCCPMPNATCCSDHLHCCPQDTVCDLIQSKCLSKENATTDL 270

Query: 403  WPKALSQHLG-VPCKTKAQCPPGHSCILTTNETSNCCPFPEAVSCRDGLHCCPQGFHCSA 579
              K  +  +G V C  +  CP G++C    +    CCPF +AV C D +HCCP GF C  
Sbjct: 271  LTKLPAHTVGDVKCDMEVSCPDGYTCCRLQSGAWGCCPFTQAVCCEDHIHCCPAGFTCDT 330

Query: 580  DGWSCLRRPDTKP-----------------SDDILCPNSQFHCPNSSTCCTMLDGSWGCC 708
               +C + P   P                   D+ C N    CP+S TCC +  G WGCC
Sbjct: 331  QKGTCEQGPHQVPWMEKAPAHLSLPDPQALKRDVPCDNVS-SCPSSDTCCQLTSGEWGCC 389

Query: 709  PMPQASCCGDKVHCCPHGTSCDLAHSRCLTVTN-THPMAKIPSQETIKTA---VQCPDAE 876
            P+P+A CC D  HCCP G +C +A  +C   +     + K+P++    +    + C D  
Sbjct: 390  PIPEAVCCSDHQHCCPQGYTC-VAEGQCQRGSEIVAGLEKMPARRASLSHPRDIGC-DQH 447

Query: 877  SQCHNNSTCCKLSSGKYGCCPLPNATCCSDHIHCCPHGFVCDPVKKKCFSKENEAID--- 1047
            + C    TCC    G + CC LP+A CC D  HCCP G+ C+   + C   E E +    
Sbjct: 448  TSCPVGQTCCPSLGGSWACCQLPHAVCCEDRQHCCPAGYTCNVKARSC---EKEVVSAQP 504

Query: 1048 --FFTKLPAHSVQEVKCDTKVSCPDDYTCCRLQSGKWGCCPFVQAVCCNDHVHCCPTGYQ 1221
              F  + P   V++V+C     C D+ TCCR     W CCP+ Q VCC D  HCCP G++
Sbjct: 505  ATFLARSPHVGVKDVECGEGHFCHDNQTCCRDNRQGWACCPYRQGVCCADRRHCCPAGFR 564

Query: 1222 CNIKKGTC 1245
            C  +   C
Sbjct: 565  CAARGTKC 572



 Score =  167 bits (423), Expect = 2e-41
 Identities = 99/304 (32%), Positives = 126/304 (41%), Gaps = 53/304 (17%)
 Frame = +1

Query: 316  CPDGQLC--------------PVACCLD-----PGGASYSC------CNPVPDK--WPKA 414
            CPDG  C                 CC D     P G  ++C      C   P +  W + 
Sbjct: 290  CPDGYTCCRLQSGAWGCCPFTQAVCCEDHIHCCPAG--FTCDTQKGTCEQGPHQVPWMEK 347

Query: 415  LSQHLG----------VPCKTKAQCPPGHSCILTTNETSNCCPFPEAVSCRDGLHCCPQG 564
               HL           VPC   + CP   +C   T+    CCP PEAV C D  HCCPQG
Sbjct: 348  APAHLSLPDPQALKRDVPCDNVSSCPSSDTCCQLTSGEWGCCPIPEAVCCSDHQHCCPQG 407

Query: 565  FHCSADGWSC--------------LRRPDTKPSDDILCPNSQFHCPNSSTCCTMLDGSWG 702
            + C A+G  C               RR       DI C +    CP   TCC  L GSW 
Sbjct: 408  YTCVAEG-QCQRGSEIVAGLEKMPARRASLSHPRDIGC-DQHTSCPVGQTCCPSLGGSWA 465

Query: 703  CCPMPQASCCGDKVHCCPHGTSCDLAHSRC-LTVTNTHPMAKIPSQETIKTA-VQCPDAE 876
            CC +P A CC D+ HCCP G +C++    C   V +  P   +     +    V+C +  
Sbjct: 466  CCQLPHAVCCEDRQHCCPAGYTCNVKARSCEKEVVSAQPATFLARSPHVGVKDVECGEGH 525

Query: 877  SQCHNNSTCCKLSSGKYGCCPLPNATCCSDHIHCCPHGFVCDPVKKKCFSKENEAIDFFT 1056
              CH+N TCC+ +   + CCP     CC+D  HCCP GF C     KC  +E    D   
Sbjct: 526  F-CHDNQTCCRDNRQGWACCPYRQGVCCADRRHCCPAGFRCAARGTKCLRREAPRWDAPL 584

Query: 1057 KLPA 1068
            + PA
Sbjct: 585  RDPA 588


>ref|NP_941965.2| keratin-associated protein 10-11 [Homo sapiens].
          Length = 298

 Score = 60.8 bits (146), Expect = 3e-09
 Identities = 77/306 (25%), Positives = 104/306 (33%), Gaps = 9/306 (2%)
 Frame = +1

Query: 334  CPVACCLDPGGASYSCCNPVPDKWPKALSQHLGVPCKTKAQCPPGHSCILTTNETSNCCP 513
            CP +CC  P  A  SCC P P                    C P  SC+     +S CC 
Sbjct: 22   CPESCCEPPCSAP-SCCAPAPS---------------LSLVCTPV-SCV-----SSPCCQ 59

Query: 514  FP-EAVSCRDGL--HCCPQGFHCSADGWSCLRRPDTKPSDDILCPNSQFHCPNSSTCCTM 684
               E  +C+ G    C P          SC ++   +P+     P  Q  C     CC  
Sbjct: 60   AACEPSACQSGCTSSCTP----------SCCQQSSCQPACCTSSPCQQACCV--PVCCKT 107

Query: 685  LDGSWGCCPMPQASCCGDKVHCCPHGTSCDLAHSRCLTVTNTHPMAKIP-SQETIKTAVQ 861
            +     CC      CCG    CC   +SC  A   C   ++  P   +P   + +     
Sbjct: 108  VCCKPVCCV---PVCCGAASSCCRQ-SSCQPA---CCASSSCQPACCVPVCCKPVCCVST 160

Query: 862  CPDAESQCHNNSTC----CKLSSGKYGCCPLPNATCCSDHIHCCPHGFVCDPVKKKCFSK 1029
            C +  S C   S+C    C  SS +  CC      CC   ++C P    C PV  +  S 
Sbjct: 161  CSEDSSSCCQQSSCQPACCTSSSYQQACCV---PVCCKT-VYCKP--ICCVPVCSRASS- 213

Query: 1030 ENEAIDFFTKLPAHSVQEVKCDTKVSCPDDYTCCRLQSG-KWGCCPFVQAVCCNDHVHCC 1206
                    ++    S Q   C T        +CCR  S     C P  ++ CC     CC
Sbjct: 214  --------SRCQQPSCQPACCTT--------SCCRPSSSVSLLCHPVCRSTCCVPVSSCC 257

Query: 1207 PTGYQC 1224
                 C
Sbjct: 258  APTSSC 263


>ref|NP_941964.2| keratin-associated protein 10-1 [Homo sapiens].
          Length = 282

 Score = 58.5 bits (140), Expect = 1e-08
 Identities = 80/330 (24%), Positives = 108/330 (32%), Gaps = 15/330 (4%)
 Frame = +1

Query: 280  VALVTGLVAGTQCPDG---QLCPVACCLDPGGASYSCCNPVPDKWPKALSQHLGVPCKTK 450
            +A  T  V  + C D      CP +CC +P   + SCC P P              C T 
Sbjct: 1    MAASTMSVCSSACSDSWQVDACPESCC-EPHCCALSCCAPAP--------------CLTL 45

Query: 451  AQCPPGHSCILTTNETSNCCPFP-EAVSCRDGL--HCCPQGFHCSADGWSCLRRPDTKPS 621
                    C   +  +S CC    E   C+ G    C P          SC ++   +P+
Sbjct: 46   V-------CTPVSRVSSPCCQAACEPSPCQSGCTSSCTP----------SCCQQSSCQPA 88

Query: 622  DDILCPNSQFHCPNSSTCCTMLDGSWGCCPMPQASCCGDKVHCCPHG----TSCDLAHSR 789
                C +S    P    CC  +     CC +P  +C  D   CC       T C  + S+
Sbjct: 89   ---CCTSS----PCQQACCVPVCCKPVCC-LP--TCSKDSSSCCQQSSCQPTCCASSSSQ 138

Query: 790  --CLTVTNTHPMAKIPS-QETIKTAVQCPDAESQCHNNSTCCKLSSGKYGCC-PLPNATC 957
              C       P+  +P+  E   +  Q    +S CH    CC  S  +  CC P+     
Sbjct: 139  QSCCVPVCCKPVCYVPTCSEDSSSCCQ----QSSCH--PACCTSSPCQQACCVPVRCKPV 192

Query: 958  CSDHIHCCPHGFVCDPVKKKCFSKENEAIDFFTKLPAHSVQEVKCDTKVSCPDDYTCCRL 1137
            C   I C P   VC      C  +              S Q   C T        +CCR 
Sbjct: 193  CCKPICCVP---VCSGASTSCCQQS-------------SCQPACCTT--------SCCRP 228

Query: 1138 QSG-KWGCCPFVQAVCCNDHVHCCPTGYQC 1224
             S     C P  +  CC     CC     C
Sbjct: 229  SSSVSLLCRPVCRPACCMPVSSCCAPASSC 258


>ref|NP_115822.1| multiple epidermal growth factor-like domains protein 10 precursor
            [Homo sapiens].
          Length = 1140

 Score = 58.2 bits (139), Expect = 2e-08
 Identities = 82/352 (23%), Positives = 118/352 (33%), Gaps = 41/352 (11%)
 Frame = +1

Query: 313  QCPDGQ-LCPVACCLDPGGASYSCCNPVPDKWPKALSQHLGVPCKTKAQCPPGHSCILTT 489
            +C  G+ + P  C  +PG    +C +            H G  C ++ QC  G  C    
Sbjct: 112  KCVHGRCIAPNTCQCEPGWGGTNCSSACD-------GDHWGPHCTSRCQCKNGALC---- 160

Query: 490  NETSNCCPFPEAVSCRDGLHCCPQGFHCSADGWSCLRRPD--TKPSDDILCPNSQFHCPN 663
            N  +  C              C  GF     GW C  R +  T  +D   C + +  C N
Sbjct: 161  NPITGACH-------------CAAGFR----GWRCEDRCEQGTYGND---C-HQRCQCQN 199

Query: 664  SSTCCTMLDGSWGCCPMPQASCCGDKVHCCPHGTSCDLAHSRCLTVTNTHPM---AKIPS 834
             +T C  + G   C P    + C D      HG  C+     C      H +      PS
Sbjct: 200  GAT-CDHVTGECRCPPGYTGAFCEDLCPPGKHGPQCE-QRCPCQNGGVCHHVTGECSCPS 257

Query: 835  QETIKTAVQ-CPDA--------ESQCHNNSTCCKLSSGKYGCCPLPNATCCSDH------ 969
                    Q CP+         E QCHN  T C  ++G+  C P      C D       
Sbjct: 258  GWMGTVCGQPCPEGRFGKNCSQECQCHNGGT-CDAATGQCHCSPGYTGERCQDECPVGTY 316

Query: 970  -IHC-----CPHGFVCDPVKKKCFSKENEAID-FFTKLPAHSVQEVKCDTKVSCPDDYT- 1125
             + C     C +G  C  V   C  +   A +    +L    +  +KCD +  C  + T 
Sbjct: 317  GVLCAETCQCVNGGKCYHVSGACLCEAGFAGERCEARLCPEGLYGIKCDKRCPCHLENTH 376

Query: 1126 CCRLQSGKWGCCPFVQAVCCND------------HVHCCPTGYQCNIKKGTC 1245
             C   SG+  C P    + CN+             +  C  G  C+   G C
Sbjct: 377  SCHPMSGECACKPGWSGLYCNETCSPGFYGEACQQICSCQNGADCDSVTGKC 428



 Score = 55.5 bits (132), Expect = 1e-07
 Identities = 101/397 (25%), Positives = 124/397 (31%), Gaps = 72/397 (18%)
 Frame = +1

Query: 313  QCPDGQLC-PV--ACCLDPGGASYSCCNPVPDKWPKALSQHLGVPCKTKAQCPPGHSCIL 483
            QC +G LC P+  AC    G   + C     D+  +      G  C  + QC  G +C  
Sbjct: 153  QCKNGALCNPITGACHCAAGFRGWRC----EDRCEQGT---YGNDCHQRCQCQNGATCDH 205

Query: 484  TTNETSNCCPFPEAVSCRDGLHCCPQGFHCSADGWSCLRRPDTK--------------PS 621
             T E   C P      C D    CP G H    G  C +R   +              PS
Sbjct: 206  VTGEC-RCPPGYTGAFCED---LCPPGKH----GPQCEQRCPCQNGGVCHHVTGECSCPS 257

Query: 622  DDI------LCPNSQF--------HCPNSSTCCTMLDGSWGCCPMPQASCCGDKVHCCPH 759
              +       CP  +F         C N  TC     G   C P      C D+   CP 
Sbjct: 258  GWMGTVCGQPCPEGRFGKNCSQECQCHNGGTC-DAATGQCHCSPGYTGERCQDE---CPV 313

Query: 760  GTSCDLAHSRCLTVTNT---HPMAKIPSQETIK----TAVQCP--------DAESQCH-N 891
            GT   L    C  V      H       +         A  CP        D    CH  
Sbjct: 314  GTYGVLCAETCQCVNGGKCYHVSGACLCEAGFAGERCEARLCPEGLYGIKCDKRCPCHLE 373

Query: 892  NSTCCKLSSGKYGCCP-----LPNATC-------CSDHIHCCPHGFVCDPVKKKCFSKEN 1035
            N+  C   SG+  C P       N TC           I  C +G  CD V  KC     
Sbjct: 374  NTHSCHPMSGECACKPGWSGLYCNETCSPGFYGEACQQICSCQNGADCDSVTGKCTCAPG 433

Query: 1036 -EAIDFFTKLPAHSVQEVKCDTKVSCPDDYTC------CRLQSGKWGC-----CPF-VQA 1176
             + ID  T  P      + C ++  C +D  C      C  ++G  G      CP     
Sbjct: 434  FKGIDCSTPCPL-GTYGINCSSRCGCKNDAVCSPVDGSCTCKAGWHGVDCSIRCPSGTWG 492

Query: 1177 VCCNDHVHCCPTGYQCNIKKGTCDLETQWVPWKEENP 1287
              CN    C   G  CN   GTC     W   K E P
Sbjct: 493  FGCNLTCQCL-NGGACNTLDGTCTCAPGWRGEKCELP 528


>ref|NP_061027.2| low-density lipoprotein receptor-related protein 1B precursor [Homo
            sapiens].
          Length = 4599

 Score = 55.5 bits (132), Expect = 1e-07
 Identities = 79/325 (24%), Positives = 111/325 (34%), Gaps = 60/325 (18%)
 Frame = +1

Query: 457  CPPGHSCILTTNETSNCCPFPEAVSCRDGLHCCPQGFHCSADGWSCLRRPDTKPSDDIL- 633
            C   + C    +E++  C    A +C+     C  G  C    W C R  D     D + 
Sbjct: 905  CDGANDCGSNEDESNQTCT---ARTCQVDQFSCGNG-RCIPRAWLCDREDDCGDQTDEMA 960

Query: 634  -------------------CPNSQFHCPNSSTCCTMLDGS--WGC---CPMPQASCCGDK 741
                               C +S++HC +   C    DGS   GC   C   Q  C   +
Sbjct: 961  SCEFPTCEPLTQFVCKSGRCISSKWHCDSDDDCG---DGSDEVGCVHSCFDNQFRCSSGR 1017

Query: 742  VHCCPHGTSCDLAHSRCLTVTNTHPMAKIP-SQETIKTAVQCPDAESQCHNNSTC----- 903
              C P   +CD   + C   ++    A+I  ++E I +   C   E QCH +  C     
Sbjct: 1018 --CIPGHWACD-GDNDCGDFSDE---AQINCTKEEIHSPAGCNGNEFQCHPDGNCVPDLW 1071

Query: 904  -------CKLSSGKYGC------CPLPNATCCSDHIHCCPHGFVCD-PVKKKCFSKENEA 1041
                   C+  S + GC      C       C     C    +VCD  +  +  S E++ 
Sbjct: 1072 RCDGEKDCEDGSDEKGCNGTIRLCDHKTKFSCWSTGRCINKAWVCDGDIDCEDQSDEDDC 1131

Query: 1042 IDFFTKLPAHSVQ---------EVKCDTKVSCPDD----YTC--CRLQSGKWGCCPFVQA 1176
              F    P H            E  C+ K  CPD     Y C  C L +G  GC      
Sbjct: 1132 DSFLCGPPKHPCANDTSVCLQPEKLCNGKKDCPDGSDEGYLCDECSLNNG--GCSNHCSV 1189

Query: 1177 VCCNDHVHCCPTGYQCNIKKGTCDL 1251
            V     V  CP G Q N    TC++
Sbjct: 1190 VPGRGIVCSCPEGLQLNKDNKTCEI 1214


>ref|NP_941962.1| keratin-associated protein 10-7 [Homo sapiens].
          Length = 370

 Score = 54.3 bits (129), Expect = 3e-07
 Identities = 66/257 (25%), Positives = 92/257 (35%), Gaps = 25/257 (9%)
 Frame = +1

Query: 550  CCPQGFHCSADGW-------SCLRRPDTKPSD--DILCPNSQFHCPNSSTCCTMLDGSWG 702
            C P      +D W       SC   P   P+    ++C    +    SS CC +      
Sbjct: 20   CLPGSCDSCSDSWQVDDCPESCCEPPCCAPAPCLSLVCTPVSYV---SSPCCRVT----- 71

Query: 703  CCPMP-QASCCGDKVHCCPHGTSCDLAHSRCLTVTNTHPMAKIPSQETIKTAVQCPDAES 879
            C P P Q+ C       C   +SC LA   C         A  P Q+     V C     
Sbjct: 72   CEPSPCQSGCTSSCTPSCCQQSSCQLA---CC--------ASSPCQQACCVPVCCKTVCC 120

Query: 880  Q-------CHNNSTCCKLSSGKYGCC-PLPNATCCSDHIHCCPHGFVCDPVKKKCFSKEN 1035
            +       C  +S+CC+ SS +  CC   P    C   I C P   VC  +   C  +++
Sbjct: 121  KPVYCVPVCSGDSSCCQQSSCQSACCTSSPCQQACCVPICCKP---VCSGISSSC-CQQS 176

Query: 1036 EAIDFFTKLPAHSVQEVK-CDTKVSCPDDYTCCRLQSGKWGCC---PFVQAVC---CNDH 1194
              +   +     +V E   C +        +CC+  S K  CC   P  QA C   C   
Sbjct: 177  SCVSCVSSPCCQAVCEPSPCQSGCISSCTPSCCQQSSCKPACCTSSPCQQACCVPVCCKP 236

Query: 1195 VHCCPTGYQCNIKKGTC 1245
            V C PT   C+   G+C
Sbjct: 237  VCCVPT---CSDDSGSC 250


>ref|NP_004516.2| low-density lipoprotein receptor-related protein 2 precursor [Homo
            sapiens].
          Length = 4655

 Score = 53.5 bits (127), Expect = 4e-07
 Identities = 70/294 (23%), Positives = 93/294 (31%), Gaps = 30/294 (10%)
 Frame = +1

Query: 454  QCPPGHSCILTTNETS---NCCPFPEAVSC--RDGLHCCPQGFHCSADG------WSCLR 600
            +C  G  CI  TN      +C    +   C  R    C    F C  DG      W C  
Sbjct: 1193 KCASGDKCIGVTNRCDGVFDCSDNSDEAGCPTRPPGMCHSDEFQCQEDGICIPNFWECDG 1252

Query: 601  RPDTKPSDDI-------LCPNSQFHCPNSSTCCTMLDGSWGCCPMPQASCCGDKVH--CC 753
             PD     D         CP+S FHC N +     +  +W C    + + CGD      C
Sbjct: 1253 HPDCLYGSDEHNACVPKTCPSSYFHCDNGNC----IHRAWLC---DRDNDCGDMSDEKDC 1305

Query: 754  PHGTSCDLAHSRCLTVTNTHPMAKIPSQETIKTAVQCPDAESQCHNNSTCCKLS---SGK 924
            P                 T P              +CP  + QC  ++ C  LS    G 
Sbjct: 1306 P-----------------TQPF-------------RCPSWQWQCLGHNICVNLSVVCDGI 1335

Query: 925  YGC------CPLPNATCCSDHIHCCPHGFVCDPVKKKCFSKENEAIDFFTKLPAHSVQEV 1086
            + C       PL N   CSD    C H  V +P   KC       + F     + + +++
Sbjct: 1336 FDCPNGTDESPLCNGNSCSDFNGGCTHECVQEPFGAKCLC----PLGFLLANDSKTCEDI 1391

Query: 1087 -KCDTKVSCPDDYTCCRLQSGKWGCCPFVQAVCCNDHVHCCPTGYQCNIKKGTC 1245
             +CD   SC      C    G + C               C TGY       TC
Sbjct: 1392 DECDILGSCSQH---CYNMRGSFRC--------------SCDTGYMLESDGRTC 1428


>ref|NP_941961.2| keratin-associated protein 10-6 [Homo sapiens].
          Length = 365

 Score = 52.0 bits (123), Expect = 1e-06
 Identities = 75/298 (25%), Positives = 104/298 (34%), Gaps = 14/298 (4%)
 Frame = +1

Query: 334  CPVACCLDPGGASYSCCNPVPDKWPKALSQHLGVPCKTKAQCPPGHSCILTTNETSNCCP 513
            CP +CC  P  A   C + V     +  S    V C+  + C  G     T++ T +CC 
Sbjct: 37   CPESCCEPPCCAPAPCLSLVCTPVSRVSSPCCPVTCE-PSPCQSG----CTSSCTPSCC- 90

Query: 514  FPEAVSCRDGLHCC---PQGFHCSADGWSCLRRPDTKPSDDILCPNSQFHCPNSSTCCTM 684
              +  SC+  L CC   P    C      C +    KP   + C +    C   S+CC  
Sbjct: 91   --QQSSCQ--LACCASSPCQQACCVP--VCCKTVCCKP---VCCVSV---CCGDSSCCQQ 138

Query: 685  LDGSWGCC---PMPQASCCGDKVHCCPHGTSCDLAHSRCLTVTNTHPMAKIPSQETIKTA 855
                  CC   P  QA C    V C P    C    S C   ++       P  + +   
Sbjct: 139  SSCQSACCTSSPCQQACCV--PVCCKP---VCSGISSSCCQQSSCVSCVSSPCCQAVCEP 193

Query: 856  VQCPDAESQCHNNST--CCKLSSGKYGCC---PLPNATC---CSDHIHCCPHGFVCDPVK 1011
              C   +S C ++ T  CC+ SS +  CC   P   A C   C   + C P    C    
Sbjct: 194  SPC---QSGCTSSCTPSCCQQSSCQPTCCTSSPCQQACCVPVCCVPVCCVP---TCSEDS 247

Query: 1012 KKCFSKENEAIDFFTKLPAHSVQEVKCDTKVSCPDDYTCCRLQSGKWGCCPFVQAVCC 1185
              C  + +      T  P        C   V      +CC+  S +  CC    A CC
Sbjct: 248  SSCCQQSSCQPACCTSSPCQHA----CCVPVCSGASTSCCQQSSCQPACC---TASCC 298



 Score = 50.8 bits (120), Expect = 3e-06
 Identities = 65/260 (25%), Positives = 98/260 (37%), Gaps = 20/260 (7%)
 Frame = +1

Query: 550  CCPQGFHCSADGW-------SCLRRPDTKPSD--DILC-PNSQFHCPNSSTCCTMLDGSW 699
            C P      +D W       SC   P   P+    ++C P S+     SS CC +     
Sbjct: 20   CLPGSCDSCSDSWQVDDCPESCCEPPCCAPAPCLSLVCTPVSRV----SSPCCPVT---- 71

Query: 700  GCCPMP-QASCCGDKVHCCPHGTSCDLAHSRCLTVTNTHPMAKIP-SQETIKTAVQCPDA 873
             C P P Q+ C       C   +SC LA   C   +       +P   +T+     C   
Sbjct: 72   -CEPSPCQSGCTSSCTPSCCQQSSCQLA---CCASSPCQQACCVPVCCKTVCCKPVC--C 125

Query: 874  ESQCHNNSTCCKLSSGKYGCC-PLPNATCCSDHIHCCPHGFVCDPVKKKCFSKENEAIDF 1050
             S C  +S+CC+ SS +  CC   P    C   + C P   VC  +   C  +++  +  
Sbjct: 126  VSVCCGDSSCCQQSSCQSACCTSSPCQQACCVPVCCKP---VCSGISSSC-CQQSSCVSC 181

Query: 1051 FTKLPAHSVQEVK-CDTKVSCPDDYTCCRLQSGKWGCC---PFVQAVC---CNDHVHCCP 1209
             +     +V E   C +  +     +CC+  S +  CC   P  QA C   C   V C P
Sbjct: 182  VSSPCCQAVCEPSPCQSGCTSSCTPSCCQQSSCQPTCCTSSPCQQACCVPVCCVPVCCVP 241

Query: 1210 TGYQCNIKKGTCDLETQWVP 1269
            T   C+    +C  ++   P
Sbjct: 242  T---CSEDSSSCCQQSSCQP 258



 Score = 49.7 bits (117), Expect = 6e-06
 Identities = 64/257 (24%), Positives = 85/257 (33%), Gaps = 27/257 (10%)
 Frame = +1

Query: 316  CPDGQLCPVACCLDPGGASYSCCNPVPDKWPKALSQHLGVPCKTKAQCPPGHSCILTTNE 495
            C     C  ACC+ P      CC PV               C     C     C  ++ +
Sbjct: 99   CCASSPCQQACCV-PVCCKTVCCKPV---------------CCVSVCCGDSSCCQQSSCQ 142

Query: 496  TSNCCPFPEAVSCRDGLHCCPQGFHCSADGWSCLRRPD-----TKPSDDILCPNS--QFH 654
            ++ C   P   +C   + C P    CS    SC ++       + P    +C  S  Q  
Sbjct: 143  SACCTSSPCQQACCVPVCCKPV---CSGISSSCCQQSSCVSCVSSPCCQAVCEPSPCQSG 199

Query: 655  CPNSST--CCTMLDGSWGCC---PMPQASC---CGDKVHCCPHGTSCDLAHSRCLTVTNT 810
            C +S T  CC        CC   P  QA C   C   V C P   +C    S C   ++ 
Sbjct: 200  CTSSCTPSCCQQSSCQPTCCTSSPCQQACCVPVCCVPVCCVP---TCSEDSSSCCQQSSC 256

Query: 811  HPMA--KIPSQETIKTAVQCPDAESQCHNNSTC---------CKLSSG-KYGCCPLPNAT 954
             P      P Q      V C  A + C   S+C         C+ SS     C P+  +T
Sbjct: 257  QPACCTSSPCQHACCVPV-CSGASTSCCQQSSCQPACCTASCCRPSSSVSLLCHPVCKST 315

Query: 955  CCSDHIHCCPHGFVCDP 1005
            CC     C      C P
Sbjct: 316  CCVPVPSCGASASSCQP 332


>ref|NP_941960.1| keratin-associated protein 10-4 [Homo sapiens].
          Length = 401

 Score = 52.0 bits (123), Expect = 1e-06
 Identities = 64/260 (24%), Positives = 86/260 (33%), Gaps = 28/260 (10%)
 Frame = +1

Query: 310  TQCPDGQLCPVACCLDP--GGASYSCCNPVPDKWPKALSQHLGVPCKTKAQCPPG----- 468
            T  P  Q C V  C  P   G S SCC         +    +  PC  +A C P      
Sbjct: 147  TSSPCQQACCVPICCKPVCSGISSSCCQQ------SSCVSCVSSPC-CQAVCEPSPCQSG 199

Query: 469  --HSCILTTNETSNCCPFPEAVSCRDGLHCCPQGFH-------CSADGWSCLRRPDTKPS 621
               SC  +  + S+C P     S      C P           CS D  SC ++   +P+
Sbjct: 200  CISSCTPSCCQQSSCQPACCTSSSCQQACCVPVCCKTVCCKPVCSEDSSSCCQQSSCQPA 259

Query: 622  DDILCPNSQFHCPNSSTCCTMLDGSWGCC-PMPQASCCGDKVHCCPHGTSCDLAHSRCLT 798
                C +S    P    CC  +     CC P+     C      C   +SC  A   C T
Sbjct: 260  ---CCTSS----PCQQACCVPVCCKPVCCKPVGSVPICSGASSLCCQQSSCQPA---CCT 309

Query: 799  VTNTHPMAKIP-SQETIKTAVQCPDAESQCHNNSTC---------CKLSSG-KYGCCPLP 945
             + +     +P   + +     C  A S C   S+C         C+ SS     C P+ 
Sbjct: 310  SSQSQQGCCVPVCCKPVSCVPVCSGASSSCCQQSSCQPACCTTSCCRPSSSVSLLCRPVC 369

Query: 946  NATCCSDHIHCCPHGFVCDP 1005
               CC     CC     C P
Sbjct: 370  RPACCVPVPSCCAPTSSCQP 389



 Score = 50.4 bits (119), Expect = 4e-06
 Identities = 81/342 (23%), Positives = 110/342 (32%), Gaps = 30/342 (8%)
 Frame = +1

Query: 334  CPVACCLDPGGASYSCCNPVPDKWPKALS------QHLGVPCKTKAQCPPGHSCILTTNE 495
            CP +CC +P   + SCC P P      LS        +  PC      P       T++ 
Sbjct: 32   CPESCC-EPPCCAPSCCAPAP-----CLSLVCTPVSRVSSPCCPVTCEPSPCQSGCTSSC 85

Query: 496  TSNCCPFPEAVSCRDGLHCC---PQGFHCSADGWSCLRRPDTKPSDDI-LCPNSQFHCPN 663
            T +CC   +  SC+  L CC   P    C      C +    KP   + +C      C  
Sbjct: 86   TPSCC---QQSSCQ--LACCASSPCQQACCVP--VCCKTVCCKPVCCVPVCCGDSSCCQQ 138

Query: 664  S---STCCTMLDGSWGCCPMP---QASCCGDKVHCCPHGTSCDLAHSRCL-TVTNTHPMA 822
            S   S CCT       CC +P   +  C G    CC   +      S C   V    P  
Sbjct: 139  SSCQSACCTSSPCQQACC-VPICCKPVCSGISSSCCQQSSCVSCVSSPCCQAVCEPSPCQ 197

Query: 823  KIPSQETIKTAVQCPDAESQCHNNST----CCKLSSGKYGCCPLPNATCCSDHIHCC--- 981
                     +  Q    +  C  +S+    CC     K  CC      C  D   CC   
Sbjct: 198  SGCISSCTPSCCQQSSCQPACCTSSSCQQACCVPVCCKTVCC---KPVCSEDSSSCCQQS 254

Query: 982  ---PHGFVCDPVKKKC---FSKENEAIDFFTKLPAHSVQEVKCDTKVSCPDDYTCCRLQS 1143
               P      P ++ C      +         +P  S     C  + SC     CC    
Sbjct: 255  SCQPACCTSSPCQQACCVPVCCKPVCCKPVGSVPICSGASSLCCQQSSCQP--ACCTSSQ 312

Query: 1144 GKWGCCPFVQAVCCNDHVHCCPTGYQCNIKKGTCDLETQWVP 1269
             + GCC     VCC   V C P    C+    +C  ++   P
Sbjct: 313  SQQGCC---VPVCCKP-VSCVPV---CSGASSSCCQQSSCQP 347


>ref|NP_115823.3| fibrillin-3 precursor [Homo sapiens].
          Length = 2809

 Score = 51.2 bits (121), Expect = 2e-06
 Identities = 75/307 (24%), Positives = 95/307 (30%), Gaps = 43/307 (14%)
 Frame = +1

Query: 448  KAQCPPGHSCILTTNETS-----------NCCPFPEAVSCRDGLHC-CPQGFHCSADGWS 591
            K QCPPGH   LT   T+             CP  + V+      C C  GF  + D   
Sbjct: 1095 KCQCPPGHE--LTAKGTACEDIDECSLSDGLCPHGQCVNVIGAFQCSCHAGFQSTPDRQG 1152

Query: 592  CLRRPDTKPSDDILCPNSQFHCPNSSTCCTMLDGSWGCCPMPQASCCGDKVHCCPHGTSC 771
            C+   + +  +         HC N+        G  G   MP    C D   C  +   C
Sbjct: 1153 CVDINECRVQNG----GCDVHCINTEGSYRCSCGQ-GYSLMPDGRACADVDECEENPRVC 1207

Query: 772  DLAHSRCLTVTNTHPMAKIPSQETIKTAVQCPDAESQCHNNSTC----CKLSSGKYGC-C 936
            D  H  C  +   H                C D +    N   C    C+ + G + C C
Sbjct: 1208 DQGH--CTNMPGGHRCLCYDGFMATPDMRTCVDVDECDLNPHICLHGDCENTKGSFVCHC 1265

Query: 937  PL-----PNATCCSDHIHCCPHGFVCD--------PVKKKCFSKENEAIDFFT--KLPAH 1071
             L       AT CSD   C   G  CD        P    C        D F    L   
Sbjct: 1266 QLGYMVRKGATGCSDVDECEVGGHNCDSHASCLNIPGSFSCRCLPGWVGDGFECHDLDEC 1325

Query: 1072 SVQEVKCDTKVSC---PDDYTC-CRLQSGKWGC-------CPFVQAVCCNDHVHCCPTGY 1218
              QE +C  +  C   P  Y C CR      G        C     +C N      P GY
Sbjct: 1326 VSQEHRCSPRGDCLNVPGSYRCTCRQGFAGDGFFCEDRDECAENVDLCDNGQCLNAPGGY 1385

Query: 1219 QCNIKKG 1239
            +C  + G
Sbjct: 1386 RCECEMG 1392


  Database: RefSeq49_HP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,297,164
  Number of sequences in database:  32,964
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 57,106,716
Number of extensions: 1724326
Number of successful extensions: 8552
Number of sequences better than 1.0e-05: 14
Number of HSP's gapped: 8144
Number of HSP's successfully gapped: 22
Length of query: 449
Length of database: 18,297,164
Length adjustment: 106
Effective length of query: 343
Effective length of database: 14,802,980
Effective search space: 5077422140
Effective search space used: 5077422140
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

Search to RefSeqMP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-007159
         (1347 letters)

Database: RefSeq49_MP.fasta 
           30,036 sequences; 15,617,559 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_032201.2| granulins [Mus musculus].                            537   e-153
Alignment   gi|NP_001001979.1| multiple epidermal growth factor-like domain...    61   2e-09
Alignment   gi|NP_001156449.1| multiple epidermal growth factor-like domain...    59   9e-09
Alignment   gi|NP_001078996.1| keratin-associated protein 9-1 [Mus musculus].     55   2e-07
Alignment   gi|NP_079689.2| RIKEN cDNA 1110058A15 [Mus musculus].                 53   5e-07
Alignment   gi|NP_032600.2| sperm mitochondrial-associated cysteine-rich pr...    51   2e-06
Alignment   gi|NP_001004157.2| scavenger receptor class F member 1 [Mus mus...    51   2e-06
Alignment   gi|NP_080670.2| late cornified envelope 1F [Mus musculus].            50   3e-06
Alignment   gi|NP_082898.1| late cornified envelope 1C [Mus musculus].            50   3e-06
Alignment   gi|NP_081098.1| late cornified envelope 1B [Mus musculus].            50   4e-06

>ref|NP_032201.2| granulins [Mus musculus].
          Length = 602

 Score =  537 bits (1383), Expect = e-153
 Identities = 227/376 (60%), Positives = 279/376 (74%), Gaps = 8/376 (2%)
 Frame = +1

Query: 241  PRRRWTMWTLVSWVALVTGLVAGTQCPDGQLCPVACCLDPGGASYSCCNPVPDKWPKALS 420
            PRRR TMW L+SW+A   GLVAGTQCPDGQ CPVACCLD GGA+YSCCNP+ D WP+  S
Sbjct: 8    PRRRQTMWVLMSWLAFAAGLVAGTQCPDGQFCPVACCLDQGGANYSCCNPLLDTWPRITS 67

Query: 421  QHLGVPCKTKAQCPPGHSCILTTNETSNCCPFPEAVSCRDGLHCCPQGFHCSADGWSCLR 600
             HL   C+T   CP G+SC+LT + TS+CCPF + VSC DG HCCPQGFHCSADG SC +
Sbjct: 68   HHLDGSCQTHGHCPAGYSCLLTVSGTSSCCPFSKGVSCGDGYHCCPQGFHCSADGKSCFQ 127

Query: 601  RPDTKPSDDILCPNSQFHCPNSSTCCTMLDGSWGCCPMPQASCCGDKVHCCPHGTSCDLA 780
              D  P   + CP SQF CP+S+TCC M+DGSWGCCPMPQASCC D+VHCCPHG SCDL 
Sbjct: 128  MSD-NPLGAVQCPGSQFECPDSATCCIMVDGSWGCCPMPQASCCEDRVHCCPHGASCDLV 186

Query: 781  HSRCLTVTNTHP-MAKIPSQET-----IKTAVQCPDAESQCHNNSTCCKLSSGKYGCCPL 942
            H+RC++ T TH  + K P+Q+T     +  +V CPDA++QC ++STCC+L +GKYGCCP+
Sbjct: 187  HTRCVSPTGTHTLLKKFPAQKTNRAVSLPFSVVCPDAKTQCPDDSTCCELPTGKYGCCPM 246

Query: 943  PNATCCSDHIHCCPHGFVCDPVKKKCFSKENEAIDFFTKLPAHSVQEVKCDTKVSCPDDY 1122
            PNA CCSDH+HCCP   VCD ++ KC SK N   D  TKLP + V+EVKCD +VSCP+ Y
Sbjct: 247  PNAICCSDHLHCCPQDTVCDLIQSKCLSK-NYTTDLLTKLPGYPVKEVKCDMEVSCPEGY 305

Query: 1123 TCCRLQSGKWGCCPFVQAVCCNDHVHCCPTGYQCNIKKGTCDLETQWVPWKEE--NPXSL 1296
            TCCRL +G WGCCPF +AVCC DH+HCCP G+QC+ +KGTC++    VPW ++   P  L
Sbjct: 306  TCCRLNTGAWGCCPFAKAVCCEDHIHCCPAGFQCHTEKGTCEMGILQVPWMKKVIAPLRL 365

Query: 1297 XPAELLASGKDVPCDN 1344
               ++L S  D PCD+
Sbjct: 366  PDPQILKS--DTPCDD 379



 Score =  250 bits (638), Expect = 2e-66
 Identities = 122/341 (35%), Positives = 161/341 (47%), Gaps = 24/341 (7%)
 Frame = +1

Query: 316  CPDGQLCPVAC--CLDPGGASYSCCNPVPDKWPKALSQHLGVPCK-TKAQCPPGHSCILT 486
            CP G  C +    C+ P G           K  +A+S    V C   K QCP   +C   
Sbjct: 177  CPHGASCDLVHTRCVSPTGTHTLLKKFPAQKTNRAVSLPFSVVCPDAKTQCPDDSTCCEL 236

Query: 487  TNETSNCCPFPEAVSCRDGLHCCPQGFHCSADGWSCLRRPDTK---------PSDDILCP 639
                  CCP P A+ C D LHCCPQ   C      CL +  T          P  ++ C 
Sbjct: 237  PTGKYGCCPMPNAICCSDHLHCCPQDTVCDLIQSKCLSKNYTTDLLTKLPGYPVKEVKC- 295

Query: 640  NSQFHCPNSSTCCTMLDGSWGCCPMPQASCCGDKVHCCPHGTSCDLAHSRCLTVTNTHPM 819
            + +  CP   TCC +  G+WGCCP  +A CC D +HCCP G  C      C       P 
Sbjct: 296  DMEVSCPEGYTCCRLNTGAWGCCPFAKAVCCEDHIHCCPAGFQCHTEKGTCEMGILQVPW 355

Query: 820  AK-------IPSQETIKTAVQCPDAESQCHNNSTCCKLSSGKYGCCPLPNATCCSDHIHC 978
             K       +P  + +K+   C D  ++C  N+TCCKL+SG +GCCP+P A CCSD+ HC
Sbjct: 356  MKKVIAPLRLPDPQILKSDTPCDDF-TRCPTNNTCCKLNSGDWGCCPIPEAVCCSDNQHC 414

Query: 979  CPHGFVCDPVKKKCFSKENEAIDFFTKLPAHS-----VQEVKCDTKVSCPDDYTCCRLQS 1143
            CP GF C  + +    K +  +    K+PA       + ++ CD   SCP   TCC    
Sbjct: 415  CPQGFTC--LAQGYCQKGDTMVAGLEKIPARQTTPLQIGDIGCDQHTSCPVGQTCCPSLK 472

Query: 1144 GKWGCCPFVQAVCCNDHVHCCPTGYQCNIKKGTCDLETQWV 1266
            G W CC    AVCC D  HCCP GY CN+K  TC+ +  ++
Sbjct: 473  GSWACCQLPHAVCCEDRQHCCPAGYTCNVKARTCEKDVDFI 513



 Score =  227 bits (579), Expect = 1e-59
 Identities = 127/374 (33%), Positives = 168/374 (44%), Gaps = 60/374 (16%)
 Frame = +1

Query: 304  AGTQCPDGQLCPVACCLDPGGASYSCCNPVPDK-------------------WPKALSQH 426
            A TQCPD       CC  P G  Y CC P+P+                      K LS++
Sbjct: 223  AKTQCPDDS----TCCELPTG-KYGCC-PMPNAICCSDHLHCCPQDTVCDLIQSKCLSKN 276

Query: 427  LG--------------VPCKTKAQCPPGHSCILTTNETSNCCPFPEAVSCRDGLHCCPQG 564
                            V C  +  CP G++C         CCPF +AV C D +HCCP G
Sbjct: 277  YTTDLLTKLPGYPVKEVKCDMEVSCPEGYTCCRLNTGAWGCCPFAKAVCCEDHIHCCPAG 336

Query: 565  FHCSADGWSC----------------LRRPDTK------PSDDILCPNSQFHCPNSSTCC 678
            F C  +  +C                LR PD +      P DD         CP ++TCC
Sbjct: 337  FQCHTEKGTCEMGILQVPWMKKVIAPLRLPDPQILKSDTPCDDFT------RCPTNNTCC 390

Query: 679  TMLDGSWGCCPMPQASCCGDKVHCCPHGTSCDLAHSRCLTV-TNTHPMAKIPSQETIKTA 855
             +  G WGCCP+P+A CC D  HCCP G +C LA   C    T    + KIP+++T    
Sbjct: 391  KLNSGDWGCCPIPEAVCCSDNQHCCPQGFTC-LAQGYCQKGDTMVAGLEKIPARQTTPLQ 449

Query: 856  VQ---CPDAESQCHNNSTCCKLSSGKYGCCPLPNATCCSDHIHCCPHGFVCDPVKKKCFS 1026
            +    C D  + C    TCC    G + CC LP+A CC D  HCCP G+ C+ VK +   
Sbjct: 450  IGDIGC-DQHTSCPVGQTCCPSLKGSWACCQLPHAVCCEDRQHCCPAGYTCN-VKARTCE 507

Query: 1027 KENEAIDFFTKLP-AHSVQEVKCDTKVSCPDDYTCCRLQSGKWGCCPFVQAVCCNDHVHC 1203
            K+ + I     L     V  V+C     C D+ TCC+  +G W CCP+++ VCC D  HC
Sbjct: 508  KDVDFIQPPVLLTLGPKVGNVECGEGHFCHDNQTCCKDSAGVWACCPYLKGVCCRDGRHC 567

Query: 1204 CPTGYQCNIKKGTC 1245
            CP G+ C+ +   C
Sbjct: 568  CPGGFHCSARGTKC 581



 Score =  166 bits (420), Expect = 4e-41
 Identities = 84/226 (37%), Positives = 107/226 (47%), Gaps = 16/226 (7%)
 Frame = +1

Query: 436  PCKTKAQCPPGHSCILTTNETSNCCPFPEAVSCRDGLHCCPQGFHCSADGWSCLRRPDTK 615
            PC    +CP  ++C    +    CCP PEAV C D  HCCPQGF C A G+   ++ DT 
Sbjct: 376  PCDDFTRCPTNNTCCKLNSGDWGCCPIPEAVCCSDNQHCCPQGFTCLAQGYC--QKGDTM 433

Query: 616  PSD---------------DILCPNSQFHCPNSSTCCTMLDGSWGCCPMPQASCCGDKVHC 750
             +                DI C +    CP   TCC  L GSW CC +P A CC D+ HC
Sbjct: 434  VAGLEKIPARQTTPLQIGDIGC-DQHTSCPVGQTCCPSLKGSWACCQLPHAVCCEDRQHC 492

Query: 751  CPHGTSCDLAHSRC-LTVTNTHPMAKIPSQETIKTAVQCPDAESQCHNNSTCCKLSSGKY 927
            CP G +C++    C   V    P   +     +   V+C +    CH+N TCCK S+G +
Sbjct: 493  CPAGYTCNVKARTCEKDVDFIQPPVLLTLGPKVGN-VECGEGHF-CHDNQTCCKDSAGVW 550

Query: 928  GCCPLPNATCCSDHIHCCPHGFVCDPVKKKCFSKENEAIDFFTKLP 1065
             CCP     CC D  HCCP GF C     KC  K+    D F + P
Sbjct: 551  ACCPYLKGVCCRDGRHCCPGGFHCSARGTKCLRKKIPRWDMFLRDP 596



 Score = 65.9 bits (159), Expect = 7e-11
 Identities = 46/129 (35%), Positives = 53/129 (41%), Gaps = 31/129 (24%)
 Frame = +1

Query: 310 TQCPDGQLC------PVACCLDPGG-----------ASYSC------CNPVPDKWPKALS 420
           T CP GQ C        ACC  P             A Y+C      C    D     + 
Sbjct: 459 TSCPVGQTCCPSLKGSWACCQLPHAVCCEDRQHCCPAGYTCNVKARTCEKDVDFIQPPVL 518

Query: 421 QHLGVPCKTKAQCPPGHSCILTTNETS--------NCCPFPEAVSCRDGLHCCPQGFHCS 576
             LG P     +C  GH C    N+T          CCP+ + V CRDG HCCP GFHCS
Sbjct: 519 LTLG-PKVGNVECGEGHFC--HDNQTCCKDSAGVWACCPYLKGVCCRDGRHCCPGGFHCS 575

Query: 577 ADGWSCLRR 603
           A G  CLR+
Sbjct: 576 ARGTKCLRK 584


>ref|NP_001001979.1| multiple epidermal growth factor-like domains protein 10 precursor
            [Mus musculus].
          Length = 1147

 Score = 61.2 bits (147), Expect = 2e-09
 Identities = 82/354 (23%), Positives = 119/354 (33%), Gaps = 43/354 (12%)
 Frame = +1

Query: 313  QCPDGQ-LCPVACCLDPGGASYSCCNPVPDKWPKALSQHLGVPCKTKAQCPPGHSCILTT 489
            +C  G+ + P  C  +PG    +C +            H G  C ++ QC     C    
Sbjct: 112  KCVHGRCIAPNTCQCEPGWGGTNCSSACD-------GDHWGPHCSSRCQCKNRALC---- 160

Query: 490  NETSNCCPFPEAVSCRDGLHCCPQGFHCSAD--GWSCLRRPD--TKPSDDILCPNSQFHC 657
            N  +  C                   HC+A   GW C  R +  T  +D   C + +  C
Sbjct: 161  NPITGAC-------------------HCAAGYRGWRCEDRCEQGTYGND---C-HQRCQC 197

Query: 658  PNSSTCCTMLDGSWGCCPMPQASCCGDKVHCCPHGTSCDLAHSRCLTVTNTHPMA---KI 828
             N +TC   + G   C P    + C D      HG  C+     C      H +      
Sbjct: 198  QNGATC-DHITGECRCSPGYTGAFCEDLCPPGKHGPHCE-QRCPCQNGGVCHHVTGECSC 255

Query: 829  PSQETIKTAVQ-CPDA--------ESQCHNNSTCCKLSSGKYGCCPLPNATCCSDH---- 969
            PS        Q CP+         E QCHN  T C  ++G+  C P      C D     
Sbjct: 256  PSGWMGTVCGQPCPEGRFGKNCSQECQCHNGGT-CDAATGQCHCSPGYTGERCQDECPVG 314

Query: 970  ---IHC-----CPHGFVCDPVKKKCFSKENEAIDFF-TKLPAHSVQEVKCDTKVSCPDDY 1122
               + C     C +G  C  V   C  +   + +    +L    +  +KCD +  C  D 
Sbjct: 315  SYGVRCAEACRCVNGGKCYHVSGTCLCEAGFSGELCEARLCPEGLYGIKCDKRCPCHLDN 374

Query: 1123 T-CCRLQSGKWGCCPFVQAVCCND------------HVHCCPTGYQCNIKKGTC 1245
            T  C   SG+ GC P    + CN+             +  C  G  C+   G C
Sbjct: 375  THSCHPMSGECGCKPGWSGLYCNETCSPGFYGEACQQICSCQNGADCDSVTGRC 428



 Score = 55.1 bits (131), Expect = 1e-07
 Identities = 95/401 (23%), Positives = 126/401 (31%), Gaps = 76/401 (18%)
 Frame = +1

Query: 313  QCPDGQLC-PV--ACCLDPGGASYSCCNPVPDKWPKALSQHLGVPCKTKAQCPPGHSCIL 483
            QC +  LC P+  AC    G   + C     D+  +      G  C  + QC  G +C  
Sbjct: 153  QCKNRALCNPITGACHCAAGYRGWRC----EDRCEQGT---YGNDCHQRCQCQNGATCDH 205

Query: 484  TTNETSNCCPFPEAVSCRD-------GLHC--------------------CPQGFHCSAD 582
             T E   C P      C D       G HC                    CP G+  +  
Sbjct: 206  ITGEC-RCSPGYTGAFCEDLCPPGKHGPHCEQRCPCQNGGVCHHVTGECSCPSGWMGTVC 264

Query: 583  GWSCLRRPDTKPSDDILCPNSQFHCPNSSTCCTMLDGSWGCCPMPQASCCGDKVHCCPHG 762
            G  C   P+ +   +    + +  C N  TC     G   C P      C D+     +G
Sbjct: 265  GQPC---PEGRFGKNC---SQECQCHNGGTC-DAATGQCHCSPGYTGERCQDECPVGSYG 317

Query: 763  TSCDLA-----HSRCLTVTNTHPMAKIPSQETIKTAVQCP--------DAESQCH-NNST 900
              C  A       +C  V+ T       S E  +  + CP        D    CH +N+ 
Sbjct: 318  VRCAEACRCVNGGKCYHVSGTCLCEAGFSGELCEARL-CPEGLYGIKCDKRCPCHLDNTH 376

Query: 901  CCKLSSGKYGCCP-----LPNATC-------CSDHIHCCPHGFVCDPVKKKCFSKEN-EA 1041
             C   SG+ GC P       N TC           I  C +G  CD V  +C      + 
Sbjct: 377  SCHPMSGECGCKPGWSGLYCNETCSPGFYGEACQQICSCQNGADCDSVTGRCACAPGFKG 436

Query: 1042 IDFFTKLPAHSVQEVKCDTKVSCPDDYTCC-------------------RLQSGKWGCCP 1164
             D  T  P      + C ++  C +D  C                    R  SG WG   
Sbjct: 437  TDCSTPCPLGRYG-INCSSRCGCKNDAVCSPVDGSCICKAGWHGVDCSIRCPSGTWG--- 492

Query: 1165 FVQAVCCNDHVHCCPTGYQCNIKKGTCDLETQWVPWKEENP 1287
            F   + C      C  G  CN   GTC     W   K E P
Sbjct: 493  FGCNLTCQ-----CLNGGACNTLDGTCTCAPGWRGAKCEFP 528


>ref|NP_001156449.1| multiple epidermal growth factor-like domains protein 6 precursor
            [Mus musculus].
          Length = 1572

 Score = 58.9 bits (141), Expect = 9e-09
 Identities = 87/372 (23%), Positives = 116/372 (31%), Gaps = 58/372 (15%)
 Frame = +1

Query: 325  GQLCPVACCLDPGGASYSCCNPV------PDKWP------KALSQHLGVPCKTKAQCPPG 468
            G+ C  +C    GG     C+P+      P+ W       + L  H G  C+    C  G
Sbjct: 1041 GKNCQHSCLCRNGGN----CDPILGQCTCPEGWTGLACENECLPGHHGAGCRLNCSCLNG 1096

Query: 469  HSCILTTNE-------TSNCCPFPEAVSCRDGLHC-----CPQGFHCSADGWSCLRRPDT 612
             +C   T         T + C  P  VS   G+HC     C +G  C     +CL  P  
Sbjct: 1097 GTCDRLTGHCRCPTGWTGDKCQSP-CVSGMFGVHCEEHCACRKGATCHHVTGACLCPPGW 1155

Query: 613  KPSD-DILCPNSQF--------HCPNSSTC------CTMLDGSWG------CCPMPQASC 729
            + S  +  CP   F        HCP  ++C      C    G  G      C P      
Sbjct: 1156 RGSHCEQACPRGWFGEACAQRCHCPPGASCHHVSGECHCPPGFTGPGCEQACQPGTFGKD 1215

Query: 730  CGDKVHCCPHGTSCDLAHSRCLTVTNTHPMAKIPSQETIKTAVQCPDAES--QCHNNSTC 903
            C     C     +C  A   C+     H       Q+   +    P  E   +C N  TC
Sbjct: 1216 CEHPCQCPGETWACHPASGACVCAAGYHGT---DCQQRCPSGRYGPGCEQICKCLNGGTC 1272

Query: 904  ------CKLSSGKYGC-----CPLPNATCCSDHIHCCPHGFVCDPVKKKCFSKENEAIDF 1050
                  C   +G  G      CP         H+  C  G  CDPV   C          
Sbjct: 1273 DPATGACYCPAGFLGADCSLACPQGRFGPSCAHVCTCGQGAACDPVSGTCICPPG----- 1327

Query: 1051 FTKLPAHSVQEVKCDTKVSCPDDYTCCRLQSGKWGCCPFVQAVCCNDHVHCCPTGYQCNI 1230
              K   H      C+    CP D      + GK GC          +H   C  G  C+ 
Sbjct: 1328 --KTGGH------CER--GCPQD------RFGK-GC----------EHKCACRNGGLCHA 1360

Query: 1231 KKGTCDLETQWV 1266
              G+C     W+
Sbjct: 1361 TNGSCSCPLGWM 1372



 Score = 53.1 bits (126), Expect = 5e-07
 Identities = 71/306 (23%), Positives = 98/306 (32%), Gaps = 30/306 (9%)
 Frame = +1

Query: 430  GVPCKTKAQCPPGHSCILTTNE-TSNCCPFPEAVSCRDGLHCCPQGFHCSADGWSCLRRP 606
            G  C+ +  C PG +C   + E  + C P  +   C         G +CS    SC+  P
Sbjct: 694  GPGCRNRCTCRPGVACDPVSGECRTQCPPGYQGEDCGQECPVGTFGVNCSG-SCSCVGAP 752

Query: 607  DTKPSDDILCPNSQFHCPNSSTCCTMLDGSWGCCPMPQASCCGDKVHCCPHGTSCDLAHS 786
              + + + LCP  +      + C    +G WG         C +    C HG SCD    
Sbjct: 753  CHRVTGECLCPPGKTGEDCGADC---PEGRWGL-------GCQEICPACEHGASCDPETG 802

Query: 787  RCLTVTNTHPMAKIPSQETIKTAVQCPDA--ESQCHNNSTC-----CKLSSGKYGCCPLP 945
             CL          +P     +    CP     + C     C     C  ++G+  C P  
Sbjct: 803  TCLC---------LPGFVGSRCQDACPAGWFGTGCQMRCACANDGHCHPATGRCSCAPGW 853

Query: 946  NATCCS----------DHIHCC----PHGFVCDPVKKKCFSKENEAIDFFTKLPAHSVQE 1083
                C           D IH C     HG  CD V   C  +         +        
Sbjct: 854  TGLSCQRACDSGHWGPDCIHPCNCSAGHG-NCDAVSGLCLCEAGYEGPQCEQWCRQGYFG 912

Query: 1084 VKCDTKVSCPDDYTCCRLQSGKWGCCPFVQAVCCNDHVHCCPTGY-------QCNIKKGT 1242
              C+ K  C    TC  + SG   C    +   C    H CP G+        CN   G 
Sbjct: 913  PGCEQKCRCEHGATCDHV-SGACTCPAGWRGSFCE---HACPAGFFGLDCGSACNCSAGA 968

Query: 1243 -CDLET 1257
             CD  T
Sbjct: 969  PCDAVT 974



 Score = 52.0 bits (123), Expect = 1e-06
 Identities = 87/378 (23%), Positives = 117/378 (30%), Gaps = 67/378 (17%)
 Frame = +1

Query: 316  CPDGQLC--PVACCLDPGGASYSCCNPV--PDKWPKALSQHLGVPCKTKAQCPPGHSCIL 483
            C +G  C   +  C  P G +   CN    PD +        G  C +   C  G +C  
Sbjct: 529  CRNGGTCFPGLDGCDCPEGWTGIICNETCPPDTF--------GKNCSSPCICQNGGTC-- 578

Query: 484  TTNETSNCCPFPEAVSCRDGLHC---CPQGF---------HCSADG------WSCLRRPD 609
              +  S  C  P  VS   G HC   CP+GF         HC+  G       +CL  P 
Sbjct: 579  --DPVSGACRCPPGVS---GAHCEDGCPKGFYGKHCRKKCHCANRGRCHRLYGACLCDPG 633

Query: 610  TKP----------------SDDILCPNSQFH-CPNSSTCCTMLDGSWG------CCPMPQ 720
                               S+D LC  S    C +    C+   G  G      C P   
Sbjct: 634  LYGRFCHLACPPWAFGPGCSEDCLCEQSHTRSCNSKDGSCSCKAGFQGERCEAECEPGSF 693

Query: 721  ASCCGDKVHCCPHGTSCDLAHSRCLTVTNTHPMAKIPSQET------IKTAVQCPDAESQ 882
               C ++  C P G +CD     C T        +   QE       +  +  C    + 
Sbjct: 694  GPGCRNRCTCRP-GVACDPVSGECRTQCPPGYQGEDCGQECPVGTFGVNCSGSCSCVGAP 752

Query: 883  CHNNSTCCKLSSGKYG--C---CPLPN-ATCCSDHIHCCPHGFVCDPVKKKCFSKENEAI 1044
            CH  +  C    GK G  C   CP       C +    C HG  CDP    C        
Sbjct: 753  CHRVTGECLCPPGKTGEDCGADCPEGRWGLGCQEICPACEHGASCDPETGTCLCLPGFVG 812

Query: 1045 DFFTKLPAHSVQEVKCDTKVSCPDDYTCCRLQSGKWGCCPFVQAVCCN----------DH 1194
                           C  + +C +D   C   +G+  C P    + C           D 
Sbjct: 813  SRCQDACPAGWFGTGCQMRCACAND-GHCHPATGRCSCAPGWTGLSCQRACDSGHWGPDC 871

Query: 1195 VHCCPTGYQCNIKKGTCD 1248
            +H C     C+   G CD
Sbjct: 872  IHPC----NCSAGHGNCD 885


>ref|NP_001078996.1| keratin-associated protein 9-1 [Mus musculus].
          Length = 358

 Score = 54.7 bits (130), Expect = 2e-07
 Identities = 65/238 (27%), Positives = 85/238 (35%), Gaps = 6/238 (2%)
 Frame = +1

Query: 310  TQCPDGQLCPVACCLDPGGASYSCCNPVPDKWPKALSQHLGVPCKTKAQCPPGHSCILTT 489
            T C     C   CC     AS  CC+P P   P          C+T    PP   C+ + 
Sbjct: 153  TSCCQPSCCETTCCKPACVAS--CCSP-PCCQPSCCETTC---CRTTCYKPP---CVTSC 203

Query: 490  NETSNC---CPFPEAVSCRDGLHCCPQGFHCSADGWSCLRRPDTKPSDDILCPNSQFHCP 660
              +SNC   C  P  ++      CC           SC R    KP+  I C   Q  C 
Sbjct: 204  CHSSNCETTCYKPTCITSCCQPSCCET---------SCCRTTCCKPTCVISC--CQPSCC 252

Query: 661  NSSTCCTMLDGSWGCCPMPQASCCGDKVHCCPHGTSCDLAHSRCLTVTNTHPMAKIPSQE 840
             ++ C T       C P    SCC  +  CC   T+C      C+T   + P  +    E
Sbjct: 253  ETTCCRTTC-----CKPTCVISCC--QPSCCE--TTC--CKPVCVTSCYSPPCCQPSCCE 301

Query: 841  TIKTAVQC--PDAESQCHNNSTCCKLSSGKYGCC-PLPNATCCSDHIHCCPHGFVCDP 1005
            T      C  P   + C   S CC+ +  +  CC P    +CCS    CC     C P
Sbjct: 302  TTCCRTTCCKPTCVTSCCQPS-CCETTCCRSTCCKPACVTSCCSP--PCCCESSSCKP 356


>ref|NP_079689.2| RIKEN cDNA 1110058A15 [Mus musculus].
          Length = 139

 Score = 53.1 bits (126), Expect = 5e-07
 Identities = 39/147 (26%), Positives = 50/147 (34%), Gaps = 2/147 (1%)
 Frame = +1

Query: 526 VSCRDGLHCCPQGFHCSADGWSCLRRPDTKPSDDILCPNSQFHCPNSSTCCTMLDGSWGC 705
           +SC+     C     C        + P   P     CP     CP  S+CC++  GS GC
Sbjct: 1   MSCQQSQQQCQAPAKCPPK----CQTPKCPPKCPPKCPPK---CPPVSSCCSL--GSGGC 51

Query: 706 CPMPQASCCGDKVHCCPHGTSCDLAHSRCLTVTNTHPMAKIPSQETIKTAVQCPDAESQC 885
           C      CC     C   G  C L+H R       H  +         +        S C
Sbjct: 52  CGSSSGGCCSSGGCCSSGGGGCCLSHHRPRRSLRRHRHS---------SGCCSSGGSSGC 102

Query: 886 HNNSTCCKLSSGKYGCCPLPNAT--CC 960
             +S CC  S G  GCC     +  CC
Sbjct: 103 CGSSGCCGSSGGSSGCCGSSGGSSGCC 129


>ref|NP_032600.2| sperm mitochondrial-associated cysteine-rich protein [Mus
           musculus].
          Length = 197

 Score = 50.8 bits (120), Expect = 2e-06
 Identities = 44/153 (28%), Positives = 52/153 (33%)
 Frame = +1

Query: 436 PCKTKAQCPPGHSCILTTNETSNCCPFPEAVSCRDGLHCCPQGFHCSADGWSCLRRPDTK 615
           P KT  QCPP             CCP      C     CCPQ   C      C  +    
Sbjct: 58  PSKTN-QCPPP------------CCP---PKPCCPPKPCCPQKPPCCPKSPCCPPKSPCC 101

Query: 616 PSDDILCPNSQFHCPNSSTCCTMLDGSWGCCPMPQASCCGDKVHCCPHGTSCDLAHSRCL 795
           P     CP     CP  +TC   L     CCP  + SCC  K  CCP    C  A   C 
Sbjct: 102 PPKPCPCP-PPCPCPCPATCPCPLKPP--CCPQ-KCSCCPKKCTCCPQPPPC-CAQPTCC 156

Query: 796 TVTNTHPMAKIPSQETIKTAVQCPDAESQCHNN 894
           +  N        S +T++   Q P +      N
Sbjct: 157 SSENKTESDSDTSGQTLEKGSQSPQSPPGAQGN 189


>ref|NP_001004157.2| scavenger receptor class F member 1 [Mus musculus].
          Length = 820

 Score = 50.8 bits (120), Expect = 2e-06
 Identities = 67/264 (25%), Positives = 86/264 (32%), Gaps = 39/264 (14%)
 Frame = +1

Query: 316 CPDGQLC--PVACCLDPGGASYSCCNPVPDK-WPKALSQHLGVPCKTKAQCPPGHS-CIL 483
           C   ++C  P  C   PG     C +  P + W     +    PC  + QC P    C  
Sbjct: 66  CRKEEVCVKPGLCRCKPGFFGAQCSSRCPGQYWGHDCRETC--PCHPRGQCEPATGDCQC 123

Query: 484 TTNETSNCCPFPEAVSCRDGLH--CCPQGFHCSAD-GW---SCLRRPDTKPSD------- 624
             N     C FP    C  G H  C P+   C  D GW   +C R     P+        
Sbjct: 124 QPNYWGRLCEFP----CTCGPHGQCDPKTGLCHCDPGWWSPTCRRPCQCNPASRCDQATG 179

Query: 625 DILCPNSQF--HCPNSSTC-----------CTMLDGSWG--C---CPMPQASCCGDKVHC 750
             +CP   +   C  S  C           C  L G WG  C   C   +  C     HC
Sbjct: 180 TCVCPPGWWGRRCSFSCNCHTSPCMQDSGRCVCLPGWWGPECSRKCQCVRGQCSVTSGHC 239

Query: 751 -CP---HGTSCDLAHSRCLTVTNTHPMAKIPSQETIKTAVQCPDAESQCHNNSTCCKLSS 918
            CP   HG  C+L  +              P         QC ++   C  N+TC  ++ 
Sbjct: 240 SCPPGFHGIRCELPCN--------------PGHY----GAQCKESCGHCELNATCSPVTG 281

Query: 919 GKYGCCPLPNATCCSDHIHCCPHG 990
               C P  N T C      CP G
Sbjct: 282 NCESCKPGWNGTQCKQP---CPAG 302


>ref|NP_080670.2| late cornified envelope 1F [Mus musculus].
          Length = 147

 Score = 50.4 bits (119), Expect = 3e-06
 Identities = 38/150 (25%), Positives = 51/150 (34%), Gaps = 5/150 (3%)
 Frame = +1

Query: 526 VSCRDGLHCCPQGFHCSADGWSCLRRPDTKPSDDILCPNSQFHCPNSSTCCTMLDGSWGC 705
           +SC+     C     C+       + P   P     CP     CP  S+CC++  GS GC
Sbjct: 1   MSCQQSQQQCQPPPKCTPKCPPKCQTPKCPPKCPPKCPPK---CPPVSSCCSL--GSGGC 55

Query: 706 CPMPQASCCGDKVHCCPHGTSCDLAHSRCLTVTNTHPMAKIPSQETIKTAVQCPDAESQC 885
           C      CC     C   G  C L+H R        P   +              +   C
Sbjct: 56  CGSSSGGCCSSGGCCSSGGGGCCLSHHR--------PRRSLRRHRHSSGCCSSGGSSGCC 107

Query: 886 HN---NSTCCKLSSGKYGCCPLPNAT--CC 960
            +   +S CC  S G  GCC     +  CC
Sbjct: 108 GSSGGSSGCCGSSGGSSGCCGSSGGSSGCC 137


>ref|NP_082898.1| late cornified envelope 1C [Mus musculus].
          Length = 147

 Score = 50.4 bits (119), Expect = 3e-06
 Identities = 38/150 (25%), Positives = 51/150 (34%), Gaps = 5/150 (3%)
 Frame = +1

Query: 526 VSCRDGLHCCPQGFHCSADGWSCLRRPDTKPSDDILCPNSQFHCPNSSTCCTMLDGSWGC 705
           +SC+     C     C+       + P   P     CP     CP  S+CC++  GS GC
Sbjct: 1   MSCQQSQQQCQPPPKCTPKCPPKCQTPKCPPKCPPKCPPK---CPPVSSCCSL--GSGGC 55

Query: 706 CPMPQASCCGDKVHCCPHGTSCDLAHSRCLTVTNTHPMAKIPSQETIKTAVQCPDAESQC 885
           C      CC     C   G  C L+H R        P   +              +   C
Sbjct: 56  CGSSSGGCCSSGGCCSSGGGGCCLSHHR--------PRRSLHRHRHSSGCCSSGGSSGCC 107

Query: 886 HN---NSTCCKLSSGKYGCCPLPNAT--CC 960
            +   +S CC  S G  GCC     +  CC
Sbjct: 108 GSSGGSSGCCGSSGGSSGCCGSSGGSSGCC 137


>ref|NP_081098.1| late cornified envelope 1B [Mus musculus].
          Length = 137

 Score = 50.1 bits (118), Expect = 4e-06
 Identities = 36/140 (25%), Positives = 48/140 (34%), Gaps = 3/140 (2%)
 Frame = +1

Query: 526 VSCRDGLHCCPQGFHCSADGWSCLRRPDTKPSDDILCPNSQFHCPNSSTCCTMLDGSWGC 705
           +SC+     C     C+       + P   P     CP     CP  S+CC++  GS GC
Sbjct: 1   MSCQQNQQQCQPPPKCTPKCPPKCQTPKCPPKCPPKCPPK---CPPVSSCCSL--GSGGC 55

Query: 706 CPMPQASCCGDKVHCCPHGTSCDLAHSRCLTVTNTHPMAKIPSQETIKTAVQCPDAESQC 885
           C      CC     C   G  C L+H R        P   +              +   C
Sbjct: 56  CGSSSGGCCSSGGCCSSGGGGCCLSHHR--------PRRSLRRHRHSSGCCSSGGSSGCC 107

Query: 886 HN---NSTCCKLSSGKYGCC 936
            +   +S CC  S G  GCC
Sbjct: 108 GSSGGSSGCCGSSGGSSGCC 127


  Database: RefSeq49_MP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 15,617,559
  Number of sequences in database:  30,036
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 48,289,058
Number of extensions: 1457775
Number of successful extensions: 7515
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 6771
Number of HSP's successfully gapped: 17
Length of query: 449
Length of database: 15,617,559
Length adjustment: 105
Effective length of query: 344
Effective length of database: 12,463,779
Effective search space: 4287539976
Effective search space used: 4287539976
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

Search to RefSeqSP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-007159
         (1347 letters)

Database: RefSeq49_SP.fasta 
           24,897 sequences; 11,343,932 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001038043.1| granulins [Sus scrofa].                           811   0.0  
Alignment   gi|XP_003356178.1| PREDICTED: multiple epidermal growth factor-...    59   5e-09
Alignment   gi|XP_003354310.1| PREDICTED: multiple epidermal growth factor-...    59   5e-09
Alignment   gi|XP_003358240.1| PREDICTED: scavenger receptor class F member...    55   7e-08
Alignment   gi|XP_003354093.1| PREDICTED: fibrillin-3-like [Sus scrofa].          51   2e-06
Alignment   gi|XP_003123232.2| PREDICTED: fibrillin-3 [Sus scrofa].               51   2e-06
Alignment   gi|XP_003128799.2| PREDICTED: protein jagged-2 [Sus scrofa].          50   3e-06
Alignment   gi|XP_003359017.1| PREDICTED: keratin-associated protein 10-8-l...    49   5e-06
Alignment   gi|XP_003134230.2| PREDICTED: prolow-density lipoprotein recept...    49   6e-06

>ref|NP_001038043.1| granulins [Sus scrofa].
          Length = 583

 Score =  811 bits (2096), Expect = 0.0
 Identities = 349/363 (96%), Positives = 356/363 (98%)
 Frame = +1

Query: 259  MWTLVSWVALVTGLVAGTQCPDGQLCPVACCLDPGGASYSCCNPVPDKWPKALSQHLGVP 438
            MWTLVSWVALVTGLVAGTQCPDGQLCPVACCLDPGGASYSCCNPVPDKWPKALSQHLGVP
Sbjct: 1    MWTLVSWVALVTGLVAGTQCPDGQLCPVACCLDPGGASYSCCNPVPDKWPKALSQHLGVP 60

Query: 439  CKTKAQCPPGHSCILTTNETSNCCPFPEAVSCRDGLHCCPQGFHCSADGWSCLRRPDTKP 618
            CKTKAQCPPGHSCILTTNETSNCCPFPEAVSCRDGLHCCPQGFHCSADGWSCLRRPDTKP
Sbjct: 61   CKTKAQCPPGHSCILTTNETSNCCPFPEAVSCRDGLHCCPQGFHCSADGWSCLRRPDTKP 120

Query: 619  SDDILCPNSQFHCPNSSTCCTMLDGSWGCCPMPQASCCGDKVHCCPHGTSCDLAHSRCLT 798
            SDDILCPNSQFHCPNSSTCCTMLDGSWGCCP+PQASCCGDKVHCCPHGTSCDLAHSRCLT
Sbjct: 121  SDDILCPNSQFHCPNSSTCCTMLDGSWGCCPLPQASCCGDKVHCCPHGTSCDLAHSRCLT 180

Query: 799  VTNTHPMAKIPSQETIKTAVQCPDAESQCHNNSTCCKLSSGKYGCCPLPNATCCSDHIHC 978
            VTNTHPMAKIPSQETIKTA+QCPDAESQCHNNSTCCKLSSGKYGCCPLPNATCCSDHIHC
Sbjct: 181  VTNTHPMAKIPSQETIKTAIQCPDAESQCHNNSTCCKLSSGKYGCCPLPNATCCSDHIHC 240

Query: 979  CPHGFVCDPVKKKCFSKENEAIDFFTKLPAHSVQEVKCDTKVSCPDDYTCCRLQSGKWGC 1158
            CPHGFVCDPVKKKCFSKENEAIDFFTKLPAHSVQEVKCDT+VSCPDDYTCCRLQSGKWGC
Sbjct: 241  CPHGFVCDPVKKKCFSKENEAIDFFTKLPAHSVQEVKCDTEVSCPDDYTCCRLQSGKWGC 300

Query: 1159 CPFVQAVCCNDHVHCCPTGYQCNIKKGTCDLETQWVPWKEENPXSLXPAELLASGKDVPC 1338
            CPFVQAVCCNDHVHCCPTGYQCNI+KGTCDLETQWVPWKE+ P SL   +LLA  +DVPC
Sbjct: 301  CPFVQAVCCNDHVHCCPTGYQCNIEKGTCDLETQWVPWKEKIPASLSRPDLLAMERDVPC 360

Query: 1339 DNV 1347
            DNV
Sbjct: 361  DNV 363



 Score =  235 bits (599), Expect = 5e-62
 Identities = 133/373 (35%), Positives = 170/373 (45%), Gaps = 32/373 (8%)
 Frame = +1

Query: 316  CPDGQLCPVACCLDPGGASYSCCNPVPDKWPKAL--SQHLGVPCKTKAQCPPGHS----- 474
            CP G  C +A         +S C  V +  P A   SQ      KT  QCP   S     
Sbjct: 165  CPHGTSCDLA---------HSRCLTVTNTHPMAKIPSQET---IKTAIQCPDAESQCHNN 212

Query: 475  --CILTTNETSNCCPFPEAVSCRDGLHCCPQGFHCSADGWSCLRRPD----------TKP 618
              C   ++    CCP P A  C D +HCCP GF C      C  + +             
Sbjct: 213  STCCKLSSGKYGCCPLPNATCCSDHIHCCPHGFVCDPVKKKCFSKENEAIDFFTKLPAHS 272

Query: 619  SDDILCPNSQFHCPNSSTCCTMLDGSWGCCPMPQASCCGDKVHCCPHGTSCDLAHSRCLT 798
              ++ C +++  CP+  TCC +  G WGCCP  QA CC D VHCCP G  C++    C  
Sbjct: 273  VQEVKC-DTEVSCPDDYTCCRLQSGKWGCCPFVQAVCCNDHVHCCPTGYQCNIEKGTCDL 331

Query: 799  VTNTHPMA-KIPSQET------IKTAVQCPDAESQCHNNSTCCKLSSGKYGCCPLPNATC 957
             T   P   KIP+  +      ++  V C D  S C ++STCC ++ G++GCCP P A C
Sbjct: 332  ETQWVPWKEKIPASLSRPDLLAMERDVPC-DNVSSCPSSSTCCPVTPGEWGCCPAPEAVC 390

Query: 958  CSDHIHCCPHGFVCDPVKKKCFSKENEAIDFFTKLPAHSVQEVK------CDTKVSCPDD 1119
            CSDH +CCP G  C  V K    ++ + +    K+P       +      CD   SCP  
Sbjct: 391  CSDHQYCCPKGHTC--VGKGHCKRKKDMVTGLNKMPTRRASASQPGNTTGCDQHTSCPVG 448

Query: 1120 YTCCRLQSGKWGCCPFVQAVCCNDHVHCCPTGYQCNIKKGTCDLETQWVPWKEENPXSLX 1299
             TCC   S  W CC    AVCC D  HCCP GY CN+K  TC+        KEE+  S  
Sbjct: 449  QTCCPSLSKGWACCQLPHAVCCEDRQHCCPAGYTCNVKARTCE--------KEED--SAL 498

Query: 1300 PAELLASGKDVPC 1338
            PA  LA   DV C
Sbjct: 499  PATHLARVGDVAC 511



 Score =  223 bits (568), Expect = 2e-58
 Identities = 111/306 (36%), Positives = 152/306 (49%), Gaps = 26/306 (8%)
 Frame = +1

Query: 433  VPCKTKAQCPPGHSCILTTNETSNCCPFPEAVSCRDGLHCCPQGFHCSADGWSC------ 594
            V C T+  CP  ++C    +    CCPF +AV C D +HCCP G+ C+ +  +C      
Sbjct: 276  VKCDTEVSCPDDYTCCRLQSGKWGCCPFVQAVCCNDHVHCCPTGYQCNIEKGTCDLETQW 335

Query: 595  ----------LRRPDTKPSD-DILCPNSQFHCPNSSTCCTMLDGSWGCCPMPQASCCGDK 741
                      L RPD    + D+ C N    CP+SSTCC +  G WGCCP P+A CC D 
Sbjct: 336  VPWKEKIPASLSRPDLLAMERDVPCDNVS-SCPSSSTCCPVTPGEWGCCPAPEAVCCSDH 394

Query: 742  VHCCPHGTSCDLAHSRC------LTVTNTHPMAKIPSQETIKTAVQCPDAESQCHNNSTC 903
             +CCP G +C +    C      +T  N  P  +  + +   T   C D  + C    TC
Sbjct: 395  QYCCPKGHTC-VGKGHCKRKKDMVTGLNKMPTRRASASQPGNTT-GC-DQHTSCPVGQTC 451

Query: 904  CKLSSGKYGCCPLPNATCCSDHIHCCPHGFVCDPVKKKCFSKENEAIDFFTKLPAHS--- 1074
            C   S  + CC LP+A CC D  HCCP G+ C+   + C  +E+ A      LPA     
Sbjct: 452  CPSLSKGWACCQLPHAVCCEDRQHCCPAGYTCNVKARTCEKEEDSA------LPATHLAR 505

Query: 1075 VQEVKCDTKVSCPDDYTCCRLQSGKWGCCPFVQAVCCNDHVHCCPTGYQCNIKKGTCDLE 1254
            V +V C  +  C ++YTCCR   G W CCP+ Q +CC D  HCCP G++C   +GT  L 
Sbjct: 506  VGDVACGERRFCHNNYTCCRDSLGGWACCPYRQGICCADGRHCCPAGFRCG-ARGTKCLH 564

Query: 1255 TQWVPW 1272
             + + W
Sbjct: 565  KEALRW 570



 Score = 60.8 bits (146), Expect = 2e-09
 Identities = 40/129 (31%), Positives = 51/129 (39%), Gaps = 25/129 (19%)
 Frame = +1

Query: 292 TGLVAGTQCPDGQLC------PVACCLDPGG-----------ASYSC------CNPVPDK 402
           TG    T CP GQ C        ACC  P             A Y+C      C    D 
Sbjct: 437 TGCDQHTSCPVGQTCCPSLSKGWACCQLPHAVCCEDRQHCCPAGYTCNVKARTCEKEEDS 496

Query: 403 WPKA--LSQHLGVPCKTKAQCPPGHSCILTTNETSNCCPFPEAVSCRDGLHCCPQGFHCS 576
              A  L++   V C  +  C   ++C   +     CCP+ + + C DG HCCP GF C 
Sbjct: 497 ALPATHLARVGDVACGERRFCHNNYTCCRDSLGGWACCPYRQGICCADGRHCCPAGFRCG 556

Query: 577 ADGWSCLRR 603
           A G  CL +
Sbjct: 557 ARGTKCLHK 565


>ref|XP_003356178.1| PREDICTED: multiple epidermal growth factor-like domains protein
            6-like [Sus scrofa].
          Length = 1982

 Score = 59.3 bits (142), Expect = 5e-09
 Identities = 92/371 (24%), Positives = 116/371 (31%), Gaps = 53/371 (14%)
 Frame = +1

Query: 292  TGLVAGTQCPDG-------QLCPV------------ACCLDPGGASYSCCNPVPDKWPKA 414
            TG   G +CP+G       ++CP             AC   PG     C +  P      
Sbjct: 1251 TGDDCGAECPEGRWGLGCQEICPACEHGATCEPETGACLCRPGFTGSRCQDGCPQG---- 1306

Query: 415  LSQHLGVPCKTKAQCPPGHSCILTTNETSNCCPFPEAVSCRDGLHCCPQGF--------- 567
               H G  C  + QC  G +C    +  S  C  P           CP GF         
Sbjct: 1307 ---HYGPGCGQQCQCEHGAAC----DHVSGACTCPAGWRGTFCERACPAGFFGVDCHHAC 1359

Query: 568  HCSADGWSCLRRPDTKPSDDILCPNSQFHCPNSSTCCTMLDGSWGCCPMPQASCCGDKVH 747
            +CSA G SC        S   LCP  +   P  S  C        C           +V 
Sbjct: 1360 NCSA-GASC-----DAVSGSCLCPPGR-QGPRCSQTCPAHTYGHNC----------SQVC 1402

Query: 748  CCPHGTSCDLAHSRCLTVTNTHPMAKIPSQETIKTAVQCPDAESQCHNNSTC------CK 909
             C +G SCD  H +C         A + +         C  +   C N  TC      C 
Sbjct: 1403 SCSNGASCDPVHGQCRCGPGWTGPACLQACPAGLYGDNCQHS-CLCQNGGTCDPVSGHCS 1461

Query: 910  LSSGKYG------CCP-LPNATCCSDHIHCCPHGFVCDPVKKKCFSKENEAIDFFTKLPA 1068
               G  G      C P L  A+C   H   C +G +CDP    C        D      A
Sbjct: 1462 CPEGWAGLACEKECLPGLFGASC--QHSCRCLNGGLCDPRTGHCLCLAGWTGDECQSPCA 1519

Query: 1069 HSVQEVKCDTKVSCPDDYTCCRLQSGKWGCCPFVQAVCCNDHV-----------HC-CPT 1212
                 V+CD   +C  +    R Q G   C P  +A  C               HC CP 
Sbjct: 1520 EGTFGVRCDEPCACRWEAAATR-QRGLL-CPPGWRARMCPTACPPGWFGEGCAQHCQCPP 1577

Query: 1213 GYQCNIKKGTC 1245
            G  C+   G C
Sbjct: 1578 GAACHHVSGEC 1588



 Score = 53.5 bits (127), Expect = 3e-07
 Identities = 77/333 (23%), Positives = 100/333 (30%), Gaps = 23/333 (6%)
 Frame = +1

Query: 325  GQLCPVACCLDPGGASYSCCNPVPDKWPKALSQHLGVPCKTKAQCPPGHSCILTTNET-- 498
            G LCP      PG  +  C    P  W        G  C    QCPPG +C   + E   
Sbjct: 1544 GLLCP------PGWRARMCPTACPPGW-------FGEGCAQHCQCPPGAACHHVSGECHC 1590

Query: 499  ----------SNCCPFPEAVSCRDGLHCCPQGFHCSADGWSCLRRPDTKPSD-DILCPNS 645
                        C P     SC     C  +   C     +C+       S     CP  
Sbjct: 1591 PPGFTGPGCEQACPPGTFGESCGQKCQCPGENQACHPASGACVCAAGYHGSGCRQRCPPG 1650

Query: 646  QFHCPNSSTCCTMLDG-----SWGCCPMPQASCCGDKVHCCPHGT-SCDLAH-SRCLTVT 804
            +F  P     C  L+G     + G C  P      D    CPHG      AH  RC    
Sbjct: 1651 RFG-PGCEQLCACLNGGSCDPATGACRCPAGFLGTDCGLACPHGRFGLGCAHVCRCGQGA 1709

Query: 805  NTHPMAKIPSQETIKTAVQCPDAESQCHNNSTC---CKLSSGKYGCCPLPNATCCSDHIH 975
               P+    +    +T V C     Q      C   C   +G  G C   N +C      
Sbjct: 1710 ACDPVTGTCTCPPGRTGVHCEHGCPQNRFGVNCEGTCSCRNG--GLCHATNGSCSCGLGW 1767

Query: 976  CCPHGFVCDPVKKKCFSKENEAIDFFTKLPAHSVQEVKCDTKVSCPDDYTCCRLQSGKWG 1155
              PH  +  P  +                         C  + SC +  TC    SG   
Sbjct: 1768 TGPHCELACPAGR---------------------YGAACHLECSCRNQGTC-EPASGACH 1805

Query: 1156 CCPFVQAVCCNDHVHCCPTGYQCNIKKGTCDLE 1254
            C P      C    H CP+G+     +GTC+ +
Sbjct: 1806 CGPGFYGQACE---HPCPSGFHGAGCRGTCECQ 1835



 Score = 51.6 bits (122), Expect = 1e-06
 Identities = 72/311 (23%), Positives = 92/311 (29%), Gaps = 33/311 (10%)
 Frame = +1

Query: 430  GVPCKTKAQCPPGHSCILTTNETSNCCPFPEAVSCRDGLHCCPQ---GFHCSADGWSCLR 600
            G  C     CPPG +C   + E    C  P     +D    CP    G +CS    SC  
Sbjct: 1178 GPGCLQTCTCPPGVACDPISGECGKEC--PAGYRGKDCGQECPAGTFGLNCSG-SCSCRG 1234

Query: 601  RPDTKPSDDILCPNSQFHCPNSSTCCTMLDGSWGCCPMPQASCCGDKVHCCPHGTSCDLA 780
             P    +   LCP  +      + C    +G WG         C +    C HG +C+  
Sbjct: 1235 APCDPVTGQCLCPPGRTGDDCGAEC---PEGRWGL-------GCQEICPACEHGATCEPE 1284

Query: 781  HSRCLTVTNTHPMAKIPSQETIKTAVQCPDA--------ESQCHNNSTC------CKLSS 918
               CL           P     +    CP          + QC + + C      C   +
Sbjct: 1285 TGACLC---------RPGFTGSRCQDGCPQGHYGPGCGQQCQCEHGAACDHVSGACTCPA 1335

Query: 919  GKYG-----CCPLPNATCCSDHIHCCPHGFVCDPVKKKCFSKE-NEAIDFFTKLPAHSV- 1077
            G  G      CP         H   C  G  CD V   C      +        PAH+  
Sbjct: 1336 GWRGTFCERACPAGFFGVDCHHACNCSAGASCDAVSGSCLCPPGRQGPRCSQTCPAHTYG 1395

Query: 1078 ----QEVKCDTKVSCPDDYTCCRLQSGKWG--CCPFVQAVCCND---HVHCCPTGYQCNI 1230
                Q   C    SC   +  CR   G  G  C     A    D   H   C  G  C+ 
Sbjct: 1396 HNCSQVCSCSNGASCDPVHGQCRCGPGWTGPACLQACPAGLYGDNCQHSCLCQNGGTCDP 1455

Query: 1231 KKGTCDLETQW 1263
              G C     W
Sbjct: 1456 VSGHCSCPEGW 1466


>ref|XP_003354310.1| PREDICTED: multiple epidermal growth factor-like domains protein 10
            [Sus scrofa].
          Length = 1152

 Score = 59.3 bits (142), Expect = 5e-09
 Identities = 75/315 (23%), Positives = 102/315 (32%), Gaps = 41/315 (13%)
 Frame = +1

Query: 424  HLGVPCKTKAQCPPGHSCILTTNETSNCCPFPEAVSCRDGLHCCPQGFHCSADGWSCLRR 603
            H G  C ++ QC             + C P   A  C  G             GW C  R
Sbjct: 80   HWGPHCSSRCQC----------KNRALCNPITGACHCAAGFR-----------GWRCEER 118

Query: 604  PD--TKPSDDILCPNSQFHCPNSSTCCTMLDGSWGCCPMPQASCCGDKVHCCPHGTSCDL 777
             +  T  +D   C + +  C N +TC   + G   C P    + C D      HG  C+ 
Sbjct: 119  CEQGTYGND---C-HQRCQCQNGATC-DHVTGECRCPPGYTGAFCEDLCPPGKHGPQCEQ 173

Query: 778  A-----HSRCLTVTNTHPMAKIPSQETIKTAVQCPDA--------ESQCHNNSTCCKLSS 918
                     C  VT   P    P          CP+         E QCHN  TC   ++
Sbjct: 174  RCPCQNGGVCHHVTGECPCP--PGWLGTVCGQPCPEGRFGKNCSQECQCHNGGTC-DAAT 230

Query: 919  GKYGCCPLPNATCCSDH-------IHC-----CPHGFVCDPVKKKCFSKENEAIDFF-TK 1059
            G+  C P      C D        + C     C +G  C  V   C  +   A D    +
Sbjct: 231  GQCHCSPGYTGERCQDECPVGTYGVGCAETCQCVNGGKCYHVSGSCLCEAGFAGDRCEAR 290

Query: 1060 LPAHSVQEVKCDTKVSC-PDDYTCCRLQSGKWGCCPFVQAVCCND------------HVH 1200
            L    +  +KCD    C PD+   C   SG+  C P    + CN+             + 
Sbjct: 291  LCPEGLYGIKCDKHCPCHPDNTHSCHPMSGECACKPGWSGLYCNETCSPGFYGEACQQIC 350

Query: 1201 CCPTGYQCNIKKGTC 1245
             C  G  C+   G C
Sbjct: 351  SCQNGADCDSVTGKC 365



 Score = 52.8 bits (125), Expect = 4e-07
 Identities = 88/345 (25%), Positives = 110/345 (31%), Gaps = 21/345 (6%)
 Frame = +1

Query: 316  CPDGQLCPVA---CCLDPGGASYSCCNPVPDKWPKALSQHLGVPCKTKAQCPPGHSCILT 486
            C +G +C      C   PG     C  P P+          G  C  + QC  G +C   
Sbjct: 177  CQNGGVCHHVTGECPCPPGWLGTVCGQPCPEG-------RFGKNCSQECQCHNGGTCDAA 229

Query: 487  TNETSNCCPFPEAVSCRDGLHCCPQGFHCSADGWSCLRRPDTKPSDDILCPNSQFHCPNS 666
            T +  +C P      C+D    CP G +      +C                    C N 
Sbjct: 230  TGQC-HCSPGYTGERCQDE---CPVGTYGVGCAETC-------------------QCVNG 266

Query: 667  STCCTMLDGSWGCCPMPQASCCGDKVHC--CP---HGTSCDLAHSRCLTVTNTHPMAKIP 831
              C  +  GS  C    +A   GD+     CP   +G  CD  H  C    NTH      
Sbjct: 267  GKCYHV-SGSCLC----EAGFAGDRCEARLCPEGLYGIKCD-KHCPCHP-DNTH------ 313

Query: 832  SQETIKTAVQCPDAESQCHNNSTCCKLSSGKYGCCPLPNATCCSDHIHCCPHGFVCDPVK 1011
            S   +     C    S  + N TC   S G YG         C   I  C +G  CD V 
Sbjct: 314  SCHPMSGECACKPGWSGLYCNETC---SPGFYG-------EACQQ-ICSCQNGADCDSVT 362

Query: 1012 KKCFSKEN-EAIDFFTKLPAHSVQEVKCDTKVSCPDDYTC------CRLQSGKWGC---- 1158
             KC      + ID  T         V C +   C +D  C      C  ++G  G     
Sbjct: 363  GKCTCAPGFKGIDCSTPCSL-GTYGVNCSSLCGCKNDAMCSPVDGSCTCKAGWHGVDCSI 421

Query: 1159 -CPF-VQAVCCNDHVHCCPTGYQCNIKKGTCDLETQWVPWKEENP 1287
             CP       CN    C   G  CN   GTC     W   K E P
Sbjct: 422  SCPSGTWGFGCNLTCQCL-NGGACNTLDGTCTCAPGWRGEKCEFP 465


>ref|XP_003358240.1| PREDICTED: scavenger receptor class F member 1 [Sus scrofa].
          Length = 830

 Score = 55.5 bits (132), Expect = 7e-08
 Identities = 86/356 (24%), Positives = 112/356 (31%), Gaps = 39/356 (10%)
 Frame = +1

Query: 295  GLVAGTQCPD---GQLCPVACCLDPGGA---SYSCCNPVPDKWPKALSQHLGVPCKTKAQ 456
            G    ++CP    G  C   C   P G    +   C   PD+W        G  C+    
Sbjct: 83   GAQCNSRCPGQYWGPDCRETCTCHPHGQCEPATGVCRCQPDRW--------GSRCEFPCA 134

Query: 457  CPPGHSCILTTNETSNCCPFPEAVSCRDGLHCCPQGFHCSADGWSCLRRPDTKPSD-DIL 633
            C P   C   T    +C P   + +CR    C P    C     SCL  P          
Sbjct: 135  CGPHGRCDPETG-ACHCEPGWWSSTCRRPCQCNPAAARCDPATGSCLCEPGWWGRRCSFR 193

Query: 634  CPNSQFHCPNSSTCCTMLDGSWG--C---CPMPQASCCGDKVHC-CPHGTSCDLAHSRCL 795
            CP     C   S  C    G WG  C   C   +  C      C CP G       +RC 
Sbjct: 194  CPCHGSPCAQESGRCACRPGWWGPECRQPCECVRGRCSAASGQCICPPG----FRGARC- 248

Query: 796  TVTNTHPMAKIPSQETIKTAVQCPDAESQCHNNSTCCKLSSGKYGCCPLPNATCCSDHIH 975
                     ++P     +   QC D+   C  N  C   +     C P  N T C  H  
Sbjct: 249  ---------ELPCAPG-RYGPQCRDSCGHCKQNEPCSADTGRCESCEPGWNGTQC--HQP 296

Query: 976  C------------CPH---GFVCDPVKKKCFSKENEAIDFFTKLPAHSVQEVKCDTKVSC 1110
            C            CPH   G  C P    C S +   +    + P  +    + D   +C
Sbjct: 297  CPPGTFGESCRQQCPHCRLGEACQPDTGHCQSCDPGRLGLRCEDPCPTGTFGE-DCGSTC 355

Query: 1111 PDDYTC----CRLQSGKWGCCPFVQAVCCNDHVHCCPTGYQ-------CNIKKGTC 1245
            P   TC    C   +G+  C        CN     CP+G+        C   +GTC
Sbjct: 356  P---TCVQGACDAVTGECVCNTGYWGPSCN---ISCPSGFHGNNCSLPCECPEGTC 405


>ref|XP_003354093.1| PREDICTED: fibrillin-3-like [Sus scrofa].
          Length = 1816

 Score = 50.8 bits (120), Expect = 2e-06
 Identities = 73/311 (23%), Positives = 98/311 (31%), Gaps = 40/311 (12%)
 Frame = +1

Query: 448  KAQCPPGHSCILTT--NETSNC------CPFPEAVSCRDGLHC-CPQGFHCSADGWSCLR 600
            +  CPPGH+  + T   +   C      CP    V+      C C  GF  +AD   C+ 
Sbjct: 228  ECHCPPGHALAMGTACEDIDECSLSDGLCPHGHCVNVIGAFQCSCHHGFQSTADLQGCVD 287

Query: 601  RPDTKPSDDILCPNSQFHCPNSSTCCTMLDGSWGCCPMPQASCCGDKVHCCPHGTSCDLA 780
              + +  +       Q HC N+        G  G   MP    C D   C  +   CD  
Sbjct: 288  TDECRAGNG----GCQVHCVNTEGSYQCSCGQ-GYSLMPDGRACADVNECEENPDICD-- 340

Query: 781  HSRCLTVTNTHPMAKIPSQETIKTAVQCPDAESQCHNNSTC----CKLSSGKYGC-CPL- 942
            + +C      H                C D +    N   C    C+ + G + C C L 
Sbjct: 341  NGQCTNEPGGHRCLCYNGFVATLDMRTCVDVDECDLNPHICLHGDCENTRGSFVCHCQLG 400

Query: 943  ----PNATCCSDHIHCCPHGFVCD--------PVKKKCFSKENEAIDFFT--KLPAHSVQ 1080
                  AT CSD   C   G  CD        P    C  +     D F        + Q
Sbjct: 401  YVIRKGATGCSDLDECELGGHSCDSHASCLNIPGSFSCRCQPGWVGDGFECHDRDECAFQ 460

Query: 1081 EVKCDTKVSC---PDDYTC-CR--LQSGKWGC-----CPFVQAVCCNDHVHCCPTGYQCN 1227
            E  C  +  C   P  Y C C        + C     C     +C N      P GY+C 
Sbjct: 461  EHGCSPRADCLNIPGSYRCSCHPGFTGDGFSCEDRDECAENVDLCENGQCLNAPGGYRCE 520

Query: 1228 IKKGTCDLETQ 1260
             + G    E Q
Sbjct: 521  CEMGFNPTEDQ 531


>ref|XP_003123232.2| PREDICTED: fibrillin-3 [Sus scrofa].
          Length = 2799

 Score = 50.8 bits (120), Expect = 2e-06
 Identities = 73/311 (23%), Positives = 98/311 (31%), Gaps = 40/311 (12%)
 Frame = +1

Query: 448  KAQCPPGHSCILTT--NETSNC------CPFPEAVSCRDGLHC-CPQGFHCSADGWSCLR 600
            +  CPPGH+  + T   +   C      CP    V+      C C  GF  +AD   C+ 
Sbjct: 1089 ECHCPPGHALAMGTACEDIDECSLSDGLCPHGHCVNVIGAFQCSCHHGFQSTADLQGCVD 1148

Query: 601  RPDTKPSDDILCPNSQFHCPNSSTCCTMLDGSWGCCPMPQASCCGDKVHCCPHGTSCDLA 780
              + +  +       Q HC N+        G  G   MP    C D   C  +   CD  
Sbjct: 1149 TDECRAGNG----GCQVHCVNTEGSYQCSCGQ-GYSLMPDGRACADVNECEENPDICD-- 1201

Query: 781  HSRCLTVTNTHPMAKIPSQETIKTAVQCPDAESQCHNNSTC----CKLSSGKYGC-CPL- 942
            + +C      H                C D +    N   C    C+ + G + C C L 
Sbjct: 1202 NGQCTNEPGGHRCLCYNGFVATLDMRTCVDVDECDLNPHICLHGDCENTRGSFVCHCQLG 1261

Query: 943  ----PNATCCSDHIHCCPHGFVCD--------PVKKKCFSKENEAIDFFT--KLPAHSVQ 1080
                  AT CSD   C   G  CD        P    C  +     D F        + Q
Sbjct: 1262 YVIRKGATGCSDLDECELGGHSCDSHASCLNIPGSFSCRCQPGWVGDGFECHDRDECAFQ 1321

Query: 1081 EVKCDTKVSC---PDDYTC-CR--LQSGKWGC-----CPFVQAVCCNDHVHCCPTGYQCN 1227
            E  C  +  C   P  Y C C        + C     C     +C N      P GY+C 
Sbjct: 1322 EHGCSPRADCLNIPGSYRCSCHPGFTGDGFSCEDRDECAENVDLCENGQCLNAPGGYRCE 1381

Query: 1228 IKKGTCDLETQ 1260
             + G    E Q
Sbjct: 1382 CEMGFNPTEDQ 1392


>ref|XP_003128799.2| PREDICTED: protein jagged-2 [Sus scrofa].
          Length = 1072

 Score = 50.1 bits (118), Expect = 3e-06
 Identities = 72/294 (24%), Positives = 98/294 (33%), Gaps = 21/294 (7%)
 Frame = +1

Query: 436  PCKTKAQCPPGHSCILTTNETSNCCPFPEAVSCRDGLHC--CPQGFHCSAD-GWSCLRRP 606
            P + +  CP G+S          C   P    C +G  C   P GF C    GWS     
Sbjct: 334  PDQYRCVCPDGYSGRNCERAEHACASNP----CANGGSCHEVPSGFECHCPAGWS----G 385

Query: 607  DTKPSDDILCPNSQFHCPNSSTCCTMLDGSWGCCPMPQ--ASCCGDKVHCCPHGTSCDLA 780
             T   D   C +S   C    TC   +DG    CP     A+C  D   C   G  C  A
Sbjct: 386  PTCALDIDECASSP--CAAGGTCVDQVDGFECICPEQWVGATCQLDANEC--EGKPCLNA 441

Query: 781  HSRCLTVTNTHPMAKIPSQETIKTAVQCPDAESQCHNNSTCCKLSSGKYGCCPLPNATCC 960
             S C  +   +    +P    +   +   D   QC +  TC  L +G Y C         
Sbjct: 442  FS-CKNLIGGYYCDCVPGWMGVNCHININDCRGQCQHGGTCKDLVNG-YQC--------- 490

Query: 961  SDHIHCCPHGF---VCDPVKKKCFSKE------NEAIDFFTKLPAHSVQEVKCDTKVS-- 1107
                  CP GF    C+    +C S         + +D F            C+  +   
Sbjct: 491  -----VCPRGFGGRHCERELDECASSPCHGGFCQDLVDGFRCHCPQGFSGPLCEVDIDFC 545

Query: 1108 ----CPDDYTCCRLQSGKWGCCP-FVQAVCCNDHVHCCPTGYQCNIKKGTCDLE 1254
                C +   C  L+   +  CP  V    C++    CP G  C +  G C LE
Sbjct: 546  EPSPCQNGAPCYNLEGDYYCACPDHVSGKNCSELREPCPGG-ACRVVDG-CGLE 597


>ref|XP_003359017.1| PREDICTED: keratin-associated protein 10-8-like [Sus scrofa].
          Length = 255

 Score = 49.3 bits (116), Expect = 5e-06
 Identities = 54/225 (24%), Positives = 73/225 (32%), Gaps = 15/225 (6%)
 Frame = +1

Query: 376  SCCNPVPDKWPKALSQHLGVPCKTKAQCPPGHSCILTTNETSNCCPFPEAVSCRDGLHCC 555
            SCC P               PC   + C P  SC+      ++C   P    C       
Sbjct: 41   SCCEP---------------PCCAPSGCAPA-SCLTLICTPASCVSNPCLSGCTSS---- 80

Query: 556  PQGFHCSADGWSCLRRPDTKPSDDILCPNSQFHCPNSSTCCTMLDGSWGCCPMPQASCCG 735
                 C+    SC ++   +PS     P  Q  C   S CCT +     CC   +AS C 
Sbjct: 81   -----CTT---SCCQQSSCQPSCCTSSPCQQDCCV--SLCCTPVCCKPVCC---EASPCS 127

Query: 736  DKVHCCPHGTSCDLAHSRCLTVTNTHPMAKIP--SQETIKTAVQCPDA--ESQCHNNSTC 903
            D  +C P   +       C       P+   P   +    T V C  A  E+   + S+C
Sbjct: 128  DSSYCQPSCCTSSPCQQACCVPVCCRPVCCRPVCCRPVCCTPVCCTPACCEASPCSASSC 187

Query: 904  CKLSSGKYGCC-----------PLPNATCCSDHIHCCPHGFVCDP 1005
            C+ S     CC           P+    CC     CC     C P
Sbjct: 188  CQPSPCPSSCCRPSSSVSLLCRPVCRPACCVPVSSCCAPASSCQP 232


>ref|XP_003134230.2| PREDICTED: prolow-density lipoprotein receptor-related protein 1-like
            [Sus scrofa].
          Length = 1977

 Score = 48.9 bits (115), Expect = 6e-06
 Identities = 59/230 (25%), Positives = 74/230 (32%), Gaps = 15/230 (6%)
 Frame = +1

Query: 388  PVPDKWPKALSQHLGVPCKTKAQCPP------GHSCILTTNETSNC---CPFPEAVSCRD 540
            P P   P  L     VPC+   +C        G       ++  NC   C  P    C D
Sbjct: 1739 PPPPPRPPLLCTRSSVPCRDGQECVSREYLCDGKRDCEDGSDEENCSYFCNKPGIFQCLD 1798

Query: 541  GLHCCPQGFHCSADGWSCLRRPDT----KPSDDILCPNSQFHCPNSSTCCTMLDGSWGCC 708
            G  C    +HC      CL   D     KP +D        HC NSS C   +  SW C 
Sbjct: 1799 GNKCIEVKYHCDGTP-QCLDGSDELDCWKPVED-----CSLHCDNSSRC---VPKSWLCD 1849

Query: 709  PMPQASCCGDKVHCCPHGTSCDLAHSRCLTVTNTHPMAKIPSQETIKTAVQCPDAESQCH 888
              P  S   D+  C          H +C             + E      QC  +  +C 
Sbjct: 1850 GKPDCSDKKDEQGC---------IHEKC------------SASEFKCENGQCVSSSLRCD 1888

Query: 889  NNSTCCKLSSGKYGC--CPLPNATCCSDHIHCCPHGFVCDPVKKKCFSKE 1032
             N  C   S  + GC   PLP           CP G V  P  ++C   E
Sbjct: 1889 GNRDCLDYSD-EEGCPARPLP-----------CPSGEVLCPRSRECVLAE 1926


  Database: RefSeq49_SP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 11,343,932
  Number of sequences in database:  24,897
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 36,137,381
Number of extensions: 1101958
Number of successful extensions: 5520
Number of sequences better than 1.0e-05: 9
Number of HSP's gapped: 5334
Number of HSP's successfully gapped: 15
Length of query: 449
Length of database: 11,343,932
Length adjustment: 102
Effective length of query: 347
Effective length of database: 8,804,438
Effective search space: 3055139986
Effective search space used: 3055139986
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

Search to Sscrofa10_2

BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-007159
         (1347 letters)

Database: Sscrofa_10.2.fasta 
           4582 sequences; 2,808,509,378 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Sscrofa_Chr12                                                         434   e-119

>Sscrofa_Chr12 
||          Length = 63588571

 Score =  434 bits (219), Expect = e-119
 Identities = 219/219 (100%)
 Strand = Plus / Plus

                                                                            
Query: 16       gcagacaggccctccctccagcctgagtcaggccagcaggacaagtctgaggaggcttga 75
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19210468 gcagacaggccctccctccagcctgagtcaggccagcaggacaagtctgaggaggcttga 19210527

                                                                            
Query: 76       ggctggactcccaagaagcaggtggagccaggtgtagatgccttgcagggagctgcgggc 135
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19210528 ggctggactcccaagaagcaggtggagccaggtgtagatgccttgcagggagctgcgggc 19210587

                                                                            
Query: 136      attggagaagagcgtgaaagggccacaggccaggactgggcttcttcagccttacccggc 195
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19210588 attggagaagagcgtgaaagggccacaggccaggactgggcttcttcagccttacccggc 19210647

                                                       
Query: 196      caggagacggcctcgtggaggtggtctttgagctgagag 234
                |||||||||||||||||||||||||||||||||||||||
Sbjct: 19210648 caggagacggcctcgtggaggtggtctttgagctgagag 19210686



 Score =  297 bits (150), Expect = 8e-78
 Identities = 150/150 (100%)
 Strand = Plus / Plus

                                                                            
Query: 248      gcaggtggaccatgtggaccctggtgagctgggtggccttggtgacagggctggtggctg 307
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19212414 gcaggtggaccatgtggaccctggtgagctgggtggccttggtgacagggctggtggctg 19212473

                                                                            
Query: 308      gaacacagtgcccggatggtcagctctgccccgtggcctgctgcctggacccgggaggag 367
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19212474 gaacacagtgcccggatggtcagctctgccccgtggcctgctgcctggacccgggaggag 19212533

                                              
Query: 368      ccagctacagctgctgcaatcccgttccgg 397
                ||||||||||||||||||||||||||||||
Sbjct: 19212534 ccagctacagctgctgcaatcccgttccgg 19212563



 Score =  270 bits (136), Expect = 2e-69
 Identities = 136/136 (100%)
 Strand = Plus / Plus

                                                                            
Query: 718      caggcttcctgctgtggagacaaggtgcactgctgcccccacggcacctcctgtgacctg 777
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19213528 caggcttcctgctgtggagacaaggtgcactgctgcccccacggcacctcctgtgacctg 19213587

                                                                            
Query: 778      gcccattcccgctgcctcacagtgaccaacacccaccccatggcaaagatcccttcacaa 837
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19213588 gcccattcccgctgcctcacagtgaccaacacccaccccatggcaaagatcccttcacaa 19213647

                                
Query: 838      gagactataaagacag 853
                ||||||||||||||||
Sbjct: 19213648 gagactataaagacag 19213663



 Score =  254 bits (128), Expect = 1e-64
 Identities = 128/128 (100%)
 Strand = Plus / Plus

                                                                            
Query: 396      ggacaagtggcccaaggcactgagccagcatctgggcgtaccctgcaagactaaagccca 455
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19212686 ggacaagtggcccaaggcactgagccagcatctgggcgtaccctgcaagactaaagccca 19212745

                                                                            
Query: 456      gtgccctcctggccactcctgcatcctcaccaccaatgagacctccaactgctgcccgtt 515
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19212746 gtgccctcctggccactcctgcatcctcaccaccaatgagacctccaactgctgcccgtt 19212805

                        
Query: 516      cccagagg 523
                ||||||||
Sbjct: 19212806 cccagagg 19212813



 Score =  252 bits (127), Expect = 4e-64
 Identities = 127/127 (100%)
 Strand = Plus / Plus

                                                                            
Query: 949      gccacctgctgctccgatcacatacactgctgcccccacggctttgtgtgtgacccggtc 1008
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19214091 gccacctgctgctccgatcacatacactgctgcccccacggctttgtgtgtgacccggtc 19214150

                                                                            
Query: 1009     aagaagaagtgcttctccaaggagaatgaagccatagacttcttcaccaagttgccagcg 1068
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19214151 aagaagaagtgcttctccaaggagaatgaagccatagacttcttcaccaagttgccagcg 19214210

                       
Query: 1069     cactcag 1075
                |||||||
Sbjct: 19214211 cactcag 19214217



 Score =  232 bits (117), Expect = 4e-58
 Identities = 117/117 (100%)
 Strand = Plus / Plus

                                                                            
Query: 605      cagataccaagccctcggatgacatcctgtgccccaacagccagttccattgccccaact 664
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19213319 cagataccaagccctcggatgacatcctgtgccccaacagccagttccattgccccaact 19213378

                                                                         
Query: 665      cctccacgtgctgcactatgcttgacggctcctggggctgctgccccatgccccagg 721
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19213379 cctccacgtgctgcactatgcttgacggctcctggggctgctgccccatgccccagg 19213435



 Score =  212 bits (107), Expect = 4e-52
 Identities = 161/177 (90%), Gaps = 2/177 (1%)
 Strand = Plus / Plus

                                                                            
Query: 1172     aggctgtctgctgtaacgaccacgtacactgctgcccgaccggatatcagtgtaacataa 1231
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 19214659 aggctgtctgctgtaacgaccacgtacactgctgcccgaccggatatcagtgtaacatag 19214718

                                                                            
Query: 1232     agaagggcacctgtgacctggaaacccagtgggtgccctggaaagaagagaatccggnca 1291
                |||||||||||||||||||||| |||||||||||||||||||| ||  |||  |||| ||
Sbjct: 19214719 agaagggcacctgtgacctggagacccagtgggtgccctggaaggagaagatcccggcca 19214778

                                                                         
Query: 1292     gcctcaanccggcggaactcctagccagtgga-aaagatgtcccctgtgataacgtc 1347
                ||||||  | | |||| |||||||||| |||| | ||||||||||||||||||||||
Sbjct: 19214779 gcctcagccggccggacctcctagcca-tggagagagatgtcccctgtgataacgtc 19214834



 Score =  196 bits (99), Expect = 2e-47
 Identities = 99/99 (100%)
 Strand = Plus / Plus

                                                                            
Query: 851      cagccgtccagtgcccagatgcagagtcccagtgccacaataattccacctgctgcaagc 910
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19213752 cagccgtccagtgcccagatgcagagtcccagtgccacaataattccacctgctgcaagc 19213811

                                                       
Query: 911      tgtccagtggaaagtatggctgctgcccgttgcccaatg 949
                |||||||||||||||||||||||||||||||||||||||
Sbjct: 19213812 tgtccagtggaaagtatggctgctgcccgttgcccaatg 19213850



 Score =  194 bits (98), Expect = 9e-47
 Identities = 101/102 (99%)
 Strand = Plus / Plus

                                                                            
Query: 1073     cagtgcaggaggtgaagtgtgacacaaaggtgagctgcccggacgactacacctgctgcc 1132
                |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 19214470 cagtgcaggaggtgaagtgtgacacagaggtgagctgcccggacgactacacctgctgcc 19214529

                                                          
Query: 1133     gcctgcagtccggaaaatggggctgctgcccttttgtccagg 1174
                ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19214530 gcctgcagtccggaaaatggggctgctgcccttttgtccagg 19214571



 Score =  172 bits (87), Expect = 3e-40
 Identities = 87/87 (100%)
 Strand = Plus / Plus

                                                                            
Query: 521      aggccgtgtcatgcagggatggcctccactgctgcccgcagggcttccactgcagtgctg 580
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19212904 aggccgtgtcatgcagggatggcctccactgctgcccgcagggcttccactgcagtgctg 19212963

                                           
Query: 581      atgggtggtcctgcctccgaagaccag 607
                |||||||||||||||||||||||||||
Sbjct: 19212964 atgggtggtcctgcctccgaagaccag 19212990


  Database: Sscrofa_10.2.fasta
    Posted date:  Nov 16, 2011 10:34 AM
  Number of letters in database: 2,808,509,378
  Number of sequences in database:  4582
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 38,662,687
Number of extensions: 261
Number of successful extensions: 261
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 260
Number of HSP's successfully gapped: 10
Length of query: 1347
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1326
Effective length of database: 2,808,413,156
Effective search space: 3723955844856
Effective search space used: 3723955844856
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)