Animal-Genome cDNA 20110601C-007217


Search to RefSeqBP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-007217
         (1089 letters)

Database: RefSeq49_BP.fasta 
           33,088 sequences; 17,681,374 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001030182.1| adenylyl cyclase-associated protein 1 [Bos t...   450   e-127
Alignment   gi|XP_002691825.1| PREDICTED: CAP1 protein-like [Bos taurus].        431   e-121
Alignment   gi|XP_600414.2| PREDICTED: CAP1 protein-like isoform 2 [Bos tau...   431   e-121
Alignment   gi|NP_001092449.1| adenylyl cyclase-associated protein 2 [Bos t...   278   5e-75

>ref|NP_001030182.1| adenylyl cyclase-associated protein 1 [Bos taurus].
          Length = 472

 Score =  450 bits (1158), Expect = e-127
 Identities = 235/304 (77%), Positives = 244/304 (80%), Gaps = 2/304 (0%)
 Frame = +2

Query: 116  MADMQNLVERLERAVGRLEAVSHASDTHCGYGDSAAKAGAAPYVQAFDSLLAGPVAEYLK 295
            MADM+NLVERLER VGRLEAVSHASDTHCGYGDSAAKAG  PYVQAFDSLLAGPVAEYLK
Sbjct: 1    MADMRNLVERLERVVGRLEAVSHASDTHCGYGDSAAKAGTTPYVQAFDSLLAGPVAEYLK 60

Query: 296  ISKEIGGDVQKHAEMVHTGLKLEQGLLVTASQCQQP--NKLSELLAPISEQIQEVITFRE 469
            ISKEIGGDVQKHAEMVHTGLKLE+ LLVTASQCQQP  NKLS+LLAPISEQIQEV+TFRE
Sbjct: 61   ISKEIGGDVQKHAEMVHTGLKLERALLVTASQCQQPAGNKLSDLLAPISEQIQEVVTFRE 120

Query: 470  KNRGSKLFNHLSAVSESIQALGWVAMAPKPGPYVKEMNDAAMFYTNRVLKEYXXXXXXXX 649
            KNRGSKLFNHLSAVSESIQALGWVAMAPKPGPYVKEMNDAAMFYTNRVLKEY        
Sbjct: 121  KNRGSKLFNHLSAVSESIQALGWVAMAPKPGPYVKEMNDAAMFYTNRVLKEYKDVDKKHV 180

Query: 650  XXXXAYLSIWTELQAYIKEFHTTGLAWSKTGPVAKELXXXXXXXXXXXXXXXXXXXXXXX 829
                AYLSIWTELQAYIKEFHTTGLAWS+TGPVAKEL                       
Sbjct: 181  DWVKAYLSIWTELQAYIKEFHTTGLAWSRTGPVAKELSGLPSGPSAGSGPPPPPPGPPPP 240

Query: 830  XXXXXXXXXXXXXXXALFAQINQGESITHALKHVSDDMKTHKTPAFKARSGPVQTGPKPF 1009
                           ALFAQINQGESITHALKHVSDDMKTHK PA KA+SG +++GPKPF
Sbjct: 241  PVPTSSGSDDSASRSALFAQINQGESITHALKHVSDDMKTHKNPALKAQSGLIRSGPKPF 300

Query: 1010 FASK 1021
             ASK
Sbjct: 301  SASK 304


>ref|XP_002691825.1| PREDICTED: CAP1 protein-like [Bos taurus].
          Length = 471

 Score =  431 bits (1108), Expect = e-121
 Identities = 231/305 (75%), Positives = 240/305 (78%), Gaps = 3/305 (0%)
 Frame = +2

Query: 116  MADMQNLVERLERAVGRLEAVSHASDTHCGYGDSAAKAGAAPYVQAFDSLLAGPVAEYLK 295
            MADM+NLVERLER VGRLEAVSHASDTHCGYGDSAAK G  PYVQAFDSLLAGPVAEYLK
Sbjct: 1    MADMRNLVERLERVVGRLEAVSHASDTHCGYGDSAAK-GTTPYVQAFDSLLAGPVAEYLK 59

Query: 296  ISKEIGGDVQKHAEMVHTGLKLEQGLLVTASQCQQP--NKLSELLAPISEQIQEVITFRE 469
            ISKE GGDVQKHAEMVHTGLKLE+ LLVTASQCQQP  NKLS+LLAPISEQIQEV+TFRE
Sbjct: 60   ISKESGGDVQKHAEMVHTGLKLERALLVTASQCQQPAGNKLSDLLAPISEQIQEVVTFRE 119

Query: 470  KNRGSKLFNHLSAVSESIQALGWVAMAPKPGPYVKEMNDAAMFYTNRVLKEYXXXXXXXX 649
            KNRGSKLFNHLSAVSESIQALGWVAMAPKPG YVKEMNDAAMFYTNRVLKEY        
Sbjct: 120  KNRGSKLFNHLSAVSESIQALGWVAMAPKPGLYVKEMNDAAMFYTNRVLKEYKDVDKKHV 179

Query: 650  XXXXAYLSIWTELQAYIKEFHTTGLAWSKTGPVAKEL-XXXXXXXXXXXXXXXXXXXXXX 826
                AYLSIWTELQAYIKEFHTTGLAWS+TGPVAKEL                       
Sbjct: 180  DWVKAYLSIWTELQAYIKEFHTTGLAWSRTGPVAKELSGLPSGPSAGSGPPPPPRQVHLP 239

Query: 827  XXXXXXXXXXXXXXXXALFAQINQGESITHALKHVSDDMKTHKTPAFKARSGPVQTGPKP 1006
                            ALFAQINQGESI HALKHVSDDMKTHK PA KA+SG +++GPKP
Sbjct: 240  PPVPTSSGSDDSASRSALFAQINQGESIIHALKHVSDDMKTHKNPALKAQSGLIRSGPKP 299

Query: 1007 FFASK 1021
            F ASK
Sbjct: 300  FSASK 304


>ref|XP_600414.2| PREDICTED: CAP1 protein-like isoform 2 [Bos taurus].
          Length = 471

 Score =  431 bits (1108), Expect = e-121
 Identities = 231/305 (75%), Positives = 240/305 (78%), Gaps = 3/305 (0%)
 Frame = +2

Query: 116  MADMQNLVERLERAVGRLEAVSHASDTHCGYGDSAAKAGAAPYVQAFDSLLAGPVAEYLK 295
            MADM+NLVERLER VGRLEAVSHASDTHCGYGDSAAK G  PYVQAFDSLLAGPVAEYLK
Sbjct: 1    MADMRNLVERLERVVGRLEAVSHASDTHCGYGDSAAK-GTTPYVQAFDSLLAGPVAEYLK 59

Query: 296  ISKEIGGDVQKHAEMVHTGLKLEQGLLVTASQCQQP--NKLSELLAPISEQIQEVITFRE 469
            ISKE GGDVQKHAEMVHTGLKLE+ LLVTASQCQQP  NKLS+LLAPISEQIQEV+TFRE
Sbjct: 60   ISKESGGDVQKHAEMVHTGLKLERALLVTASQCQQPAGNKLSDLLAPISEQIQEVVTFRE 119

Query: 470  KNRGSKLFNHLSAVSESIQALGWVAMAPKPGPYVKEMNDAAMFYTNRVLKEYXXXXXXXX 649
            KNRGSKLFNHLSAVSESIQALGWVAMAPKPG YVKEMNDAAMFYTNRVLKEY        
Sbjct: 120  KNRGSKLFNHLSAVSESIQALGWVAMAPKPGLYVKEMNDAAMFYTNRVLKEYKDVDKKHV 179

Query: 650  XXXXAYLSIWTELQAYIKEFHTTGLAWSKTGPVAKEL-XXXXXXXXXXXXXXXXXXXXXX 826
                AYLSIWTELQAYIKEFHTTGLAWS+TGPVAKEL                       
Sbjct: 180  DWVKAYLSIWTELQAYIKEFHTTGLAWSRTGPVAKELSGLPSGPSAGSGPPPPPRQVHLP 239

Query: 827  XXXXXXXXXXXXXXXXALFAQINQGESITHALKHVSDDMKTHKTPAFKARSGPVQTGPKP 1006
                            ALFAQINQGESI HALKHVSDDMKTHK PA KA+SG +++GPKP
Sbjct: 240  PPVPTSSGSDDSASRSALFAQINQGESIIHALKHVSDDMKTHKNPALKAQSGLIRSGPKP 299

Query: 1007 FFASK 1021
            F ASK
Sbjct: 300  FSASK 304


>ref|NP_001092449.1| adenylyl cyclase-associated protein 2 [Bos taurus].
          Length = 486

 Score =  278 bits (712), Expect = 5e-75
 Identities = 155/298 (52%), Positives = 188/298 (63%), Gaps = 9/298 (3%)
 Frame = +2

Query: 116 MADMQNLVERLERAVGRLE---AVSHASDTHCGYGDSAAKAGAAPYVQAFDSLLAGPVAE 286
           MA+MQ L+ERLERAVGRLE   A SH     CG   +    G AP V+AFD L+   VAE
Sbjct: 1   MAEMQGLMERLERAVGRLELLSAGSHRPPGDCGE-INGVNGGVAPSVEAFDKLMNSMVAE 59

Query: 287 YLKISKEIGGDVQKHAEMVHTGLKLEQGLLVTASQCQQP--NKLSELLAPISEQIQEVIT 460
           +LK S+ + GDV+ HAEMVH+  + ++  L+ ASQ QQP  N ++ LL PISE+IQE+ T
Sbjct: 60  FLKKSRILAGDVETHAEMVHSAFQAQRAFLLMASQYQQPQENDVAALLKPISEKIQEIQT 119

Query: 461 FREKNRGSKLFNHLSAVSESIQALGWVAMAPKPGPYVKEMNDAAMFYTNRVLKEYXXXXX 640
           FRE+NRGS +FNHLSAVSESI ALGW+A++PKPGPYVKEMNDAA FYTNRVLK+Y     
Sbjct: 120 FRERNRGSTMFNHLSAVSESIPALGWIAVSPKPGPYVKEMNDAATFYTNRVLKDYKHSDL 179

Query: 641 XXXXXXXAYLSIWTELQAYIKEFHTTGLAWSKTGPVAKEL----XXXXXXXXXXXXXXXX 808
                  +YL+IW+ELQAYIKE HTTGL WSKTGPVA                       
Sbjct: 180 RHVDWVKSYLNIWSELQAYIKEHHTTGLTWSKTGPVASTASALSVLSLGPGLPPPPPPPP 239

Query: 809 XXXXXXXXXXXXXXXXXXXXXXALFAQINQGESITHALKHVSDDMKTHKTPAFKARSG 982
                                 ALFAQ+NQGE+IT  L+HV+DD KT+K P  +A  G
Sbjct: 240 PPGPPLLFESEGIKEPSSPSRSALFAQLNQGEAITKGLRHVTDDQKTYKNPNLRAHGG 297


  Database: RefSeq49_BP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 17,681,374
  Number of sequences in database:  33,088
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 43,087,578
Number of extensions: 1170259
Number of successful extensions: 4181
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 4120
Number of HSP's successfully gapped: 7
Length of query: 363
Length of database: 17,681,374
Length adjustment: 104
Effective length of query: 259
Effective length of database: 14,240,222
Effective search space: 3688217498
Effective search space used: 3688217498
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

Search to RefSeqCP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-007217
         (1089 letters)

Database: RefSeq49_CP.fasta 
           33,336 sequences; 18,874,504 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_848565.1| PREDICTED: similar to Adenylyl cyclase-associat...   453   e-127
Alignment   gi|XP_532545.2| PREDICTED: similar to Adenylyl cyclase-associat...   439   e-123
Alignment   gi|XP_856632.1| PREDICTED: similar to Adenylyl cyclase-associat...   431   e-121
Alignment   gi|XP_535897.2| PREDICTED: similar to adenylyl cyclase-associat...   282   3e-76
Alignment   gi|XP_858447.1| PREDICTED: similar to adenylyl cyclase-associat...   282   3e-76
Alignment   gi|XP_856592.1| PREDICTED: similar to CAP, adenylate cyclase-as...   125   5e-29
Alignment   gi|XP_856556.1| PREDICTED: similar to CAP, adenylate cyclase-as...    91   1e-18
Alignment   gi|XP_856509.1| PREDICTED: similar to CAP, adenylate cyclase-as...    64   2e-10
Alignment   gi|XP_858406.1| PREDICTED: similar to adenylyl cyclase-associat...    62   1e-09

>ref|XP_848565.1| PREDICTED: similar to Adenylyl cyclase-associated protein 1 (CAP 1)
            isoform 2 [Canis familiaris].
          Length = 475

 Score =  453 bits (1165), Expect = e-127
 Identities = 241/326 (73%), Positives = 250/326 (76%), Gaps = 2/326 (0%)
 Frame = +2

Query: 116  MADMQNLVERLERAVGRLEAVSHASDTHCGYGDSAAKAGAAPYVQAFDSLLAGPVAEYLK 295
            MADMQ LVERLERAVGRLEAVSHASD HCGYGDSA KAGAAPYVQAFDSLLAGPVAEYLK
Sbjct: 1    MADMQKLVERLERAVGRLEAVSHASDMHCGYGDSAPKAGAAPYVQAFDSLLAGPVAEYLK 60

Query: 296  ISKEIGGDVQKHAEMVHTGLKLEQGLLVTASQCQQP--NKLSELLAPISEQIQEVITFRE 469
            ISKEIGGDVQKHAEMVHTGLKLE+ LLVTASQCQQP  NKLS+LLAPISEQIQEVIT+RE
Sbjct: 61   ISKEIGGDVQKHAEMVHTGLKLERALLVTASQCQQPAGNKLSDLLAPISEQIQEVITYRE 120

Query: 470  KNRGSKLFNHLSAVSESIQALGWVAMAPKPGPYVKEMNDAAMFYTNRVLKEYXXXXXXXX 649
            KNRGSKLFNHLSAVSESIQALGWVAMAPKPGPYVKEMNDAAMFYTNRVLKEY        
Sbjct: 121  KNRGSKLFNHLSAVSESIQALGWVAMAPKPGPYVKEMNDAAMFYTNRVLKEYKDVDKKHV 180

Query: 650  XXXXAYLSIWTELQAYIKEFHTTGLAWSKTGPVAKELXXXXXXXXXXXXXXXXXXXXXXX 829
                AYLSIWTELQAYIKEFHTTGLAWSKTGPVA+EL                       
Sbjct: 181  DWVKAYLSIWTELQAYIKEFHTTGLAWSKTGPVAQELSGLPSGPSAGSGPPPPPPGPPPP 240

Query: 830  XXXXXXXXXXXXXXXALFAQINQGESITHALKHVSDDMKTHKTPAFKARSGPVQTGPKPF 1009
                           ALFAQINQGESITHALKHVSDDMKTHK PA KA+SGPV++GPKPF
Sbjct: 241  PVPTSSGSDESASRSALFAQINQGESITHALKHVSDDMKTHKNPALKAQSGPVRSGPKPF 300

Query: 1010 FASKLEIXXXXXXXXXXXXXLLRLEG 1087
             A K  +             +L LEG
Sbjct: 301  SAPKPGVSPSPKPTAKKEPAVLELEG 326


>ref|XP_532545.2| PREDICTED: similar to Adenylyl cyclase-associated protein 1 (CAP 1)
            isoform 1 [Canis familiaris].
          Length = 501

 Score =  439 bits (1128), Expect = e-123
 Identities = 241/352 (68%), Positives = 250/352 (71%), Gaps = 28/352 (7%)
 Frame = +2

Query: 116  MADMQNLVERLERAVGRLEAVSHASDTHCGYGDSAAKAGAAPYVQAFDSLLAGPVAEYLK 295
            MADMQ LVERLERAVGRLEAVSHASD HCGYGDSA KAGAAPYVQAFDSLLAGPVAEYLK
Sbjct: 1    MADMQKLVERLERAVGRLEAVSHASDMHCGYGDSAPKAGAAPYVQAFDSLLAGPVAEYLK 60

Query: 296  ISKEIGGDVQKHAEMVHTGLKLEQGLLVTASQCQQP--NKLSELLAPISEQIQEVITFRE 469
            ISKEIGGDVQKHAEMVHTGLKLE+ LLVTASQCQQP  NKLS+LLAPISEQIQEVIT+RE
Sbjct: 61   ISKEIGGDVQKHAEMVHTGLKLERALLVTASQCQQPAGNKLSDLLAPISEQIQEVITYRE 120

Query: 470  KNRGSKLFNHLSAVSESIQALGWVAMAPKPGPYVKEMNDAAMFYTNRVLKEYXXXXXXXX 649
            KNRGSKLFNHLSAVSESIQALGWVAMAPKPGPYVKEMNDAAMFYTNRVLKEY        
Sbjct: 121  KNRGSKLFNHLSAVSESIQALGWVAMAPKPGPYVKEMNDAAMFYTNRVLKEYKDVDKKHV 180

Query: 650  XXXXAYLSIWTELQAYIKEFHTTGLAWSKTGPVAKELXXXXXXXXXXXXXXXXXXXXXXX 829
                AYLSIWTELQAYIKEFHTTGLAWSKTGPVA+EL                       
Sbjct: 181  DWVKAYLSIWTELQAYIKEFHTTGLAWSKTGPVAQELSGLPSGPSAGSGPPPPPPGPPPP 240

Query: 830  XXXXXXXXXXXXXXXALFAQINQGESITH--------------------------ALKHV 931
                           ALFAQINQGESITH                          ALKHV
Sbjct: 241  PVPTSSGSDESASRSALFAQINQGESITHGKPDGLNQNPGIRGMKERHKVAVVPTALKHV 300

Query: 932  SDDMKTHKTPAFKARSGPVQTGPKPFFASKLEIXXXXXXXXXXXXXLLRLEG 1087
            SDDMKTHK PA KA+SGPV++GPKPF A K  +             +L LEG
Sbjct: 301  SDDMKTHKNPALKAQSGPVRSGPKPFSAPKPGVSPSPKPTAKKEPAVLELEG 352


>ref|XP_856632.1| PREDICTED: similar to Adenylyl cyclase-associated protein 1 (CAP 1)
            isoform 7 [Canis familiaris].
          Length = 490

 Score =  431 bits (1109), Expect = e-121
 Identities = 238/343 (69%), Positives = 248/343 (72%), Gaps = 19/343 (5%)
 Frame = +2

Query: 116  MADMQNLVERLERAVGRLEAVSHASDTHCGYGDSAAKAGAAPYVQAFDSLLAGPVAEYLK 295
            MADMQ LVERLERAVGRLEAVSHASD HCGYGDSA KAGAAPYVQAFDSLLAGPVAEYLK
Sbjct: 1    MADMQKLVERLERAVGRLEAVSHASDMHCGYGDSAPKAGAAPYVQAFDSLLAGPVAEYLK 60

Query: 296  ISKEIGGDVQKHAEMVHTGLKLEQGLLVTASQCQQP--NKLSELLAPISEQIQEVITFRE 469
            ISKEIGGDVQKHAEMVHTGLKLE+ LLVTASQCQQP  NKLS+LLAPISEQIQEVIT+RE
Sbjct: 61   ISKEIGGDVQKHAEMVHTGLKLERALLVTASQCQQPAGNKLSDLLAPISEQIQEVITYRE 120

Query: 470  KNRGSKLFNHLSAVSESIQALGWVAMAPKPGPYVKEMNDAAMFYTNRVLKEYXXXXXXXX 649
            KNRGSKLFNHLSAVSESIQALGWVAMAPKPGPYVKEMNDAAMFYTNRVLKEY        
Sbjct: 121  KNRGSKLFNHLSAVSESIQALGWVAMAPKPGPYVKEMNDAAMFYTNRVLKEYKDVDKKHV 180

Query: 650  XXXXAYLSIWTELQAYIKEFHTTGLAWSKTGPVAK-----------------ELXXXXXX 778
                AYLSIWTELQAYIKEFHTTGLAWSKT  V+K                 +L      
Sbjct: 181  DWVKAYLSIWTELQAYIKEFHTTGLAWSKT--VSKSFLPLSVPPRQEDGCYLQLSGLPSG 238

Query: 779  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALFAQINQGESITHALKHVSDDMKTHKT 958
                                            ALFAQINQGESITHALKHVSDDMKTHK 
Sbjct: 239  PSAGSGPPPPPPGPPPPPVPTSSGSDESASRSALFAQINQGESITHALKHVSDDMKTHKN 298

Query: 959  PAFKARSGPVQTGPKPFFASKLEIXXXXXXXXXXXXXLLRLEG 1087
            PA KA+SGPV++GPKPF A K  +             +L LEG
Sbjct: 299  PALKAQSGPVRSGPKPFSAPKPGVSPSPKPTAKKEPAVLELEG 341


>ref|XP_535897.2| PREDICTED: similar to adenylyl cyclase-associated protein 2 isoform 1
            [Canis familiaris].
          Length = 477

 Score =  282 bits (722), Expect = 3e-76
 Identities = 156/306 (50%), Positives = 193/306 (63%), Gaps = 10/306 (3%)
 Frame = +2

Query: 116  MADMQNLVERLERAVGRLEAVSHASDTHCGYGD----SAAKAGAAPYVQAFDSLLAGPVA 283
            MA+MQ L+ERLER VGRLE +S  +++H   GD    +    G AP V+AFD L+   VA
Sbjct: 1    MAEMQGLMERLERVVGRLEVLS--AESHRPPGDFGEINGVNGGVAPSVEAFDKLMNSMVA 58

Query: 284  EYLKISKEIGGDVQKHAEMVHTGLKLEQGLLVTASQCQQP--NKLSELLAPISEQIQEVI 457
            E+LK S+ + GDV+ HAEMVH+  + ++  L+ ASQ QQP  N ++ LL PISE+IQE+ 
Sbjct: 59   EFLKKSRILAGDVETHAEMVHSAFQAQRAFLLMASQHQQPQENDVAALLKPISEKIQEIQ 118

Query: 458  TFREKNRGSKLFNHLSAVSESIQALGWVAMAPKPGPYVKEMNDAAMFYTNRVLKEYXXXX 637
            TFRE+NRGSK+FNHLSAVSESI ALGW+A++PKPGPYVKEMNDAA FYTNRVLK+Y    
Sbjct: 119  TFRERNRGSKMFNHLSAVSESIPALGWIAVSPKPGPYVKEMNDAATFYTNRVLKDYKHSD 178

Query: 638  XXXXXXXXAYLSIWTELQAYIKEFHTTGLAWSKTGPVAKEL----XXXXXXXXXXXXXXX 805
                    +YL+IW+ELQAYIKE HTTGL WSKTGPVA                      
Sbjct: 179  LRHVDWVKSYLNIWSELQAYIKEHHTTGLTWSKTGPVASTASALSVLSPGPGLPPPPPPP 238

Query: 806  XXXXXXXXXXXXXXXXXXXXXXXALFAQINQGESITHALKHVSDDMKTHKTPAFKARSGP 985
                                   ALFAQ+NQGE IT  L+HV+DD KTHK P+ +A  G 
Sbjct: 239  PPPGPPPFFENEGRREESSPSRSALFAQLNQGEEITKGLRHVTDDQKTHKNPSLRAPGGQ 298

Query: 986  VQTGPK 1003
              +  K
Sbjct: 299  TPSPTK 304


>ref|XP_858447.1| PREDICTED: similar to adenylyl cyclase-associated protein 2 isoform 3
            [Canis familiaris].
          Length = 460

 Score =  282 bits (722), Expect = 3e-76
 Identities = 156/306 (50%), Positives = 193/306 (63%), Gaps = 10/306 (3%)
 Frame = +2

Query: 116  MADMQNLVERLERAVGRLEAVSHASDTHCGYGD----SAAKAGAAPYVQAFDSLLAGPVA 283
            MA+MQ L+ERLER VGRLE +S  +++H   GD    +    G AP V+AFD L+   VA
Sbjct: 1    MAEMQGLMERLERVVGRLEVLS--AESHRPPGDFGEINGVNGGVAPSVEAFDKLMNSMVA 58

Query: 284  EYLKISKEIGGDVQKHAEMVHTGLKLEQGLLVTASQCQQP--NKLSELLAPISEQIQEVI 457
            E+LK S+ + GDV+ HAEMVH+  + ++  L+ ASQ QQP  N ++ LL PISE+IQE+ 
Sbjct: 59   EFLKKSRILAGDVETHAEMVHSAFQAQRAFLLMASQHQQPQENDVAALLKPISEKIQEIQ 118

Query: 458  TFREKNRGSKLFNHLSAVSESIQALGWVAMAPKPGPYVKEMNDAAMFYTNRVLKEYXXXX 637
            TFRE+NRGSK+FNHLSAVSESI ALGW+A++PKPGPYVKEMNDAA FYTNRVLK+Y    
Sbjct: 119  TFRERNRGSKMFNHLSAVSESIPALGWIAVSPKPGPYVKEMNDAATFYTNRVLKDYKHSD 178

Query: 638  XXXXXXXXAYLSIWTELQAYIKEFHTTGLAWSKTGPVAKEL----XXXXXXXXXXXXXXX 805
                    +YL+IW+ELQAYIKE HTTGL WSKTGPVA                      
Sbjct: 179  LRHVDWVKSYLNIWSELQAYIKEHHTTGLTWSKTGPVASTASALSVLSPGPGLPPPPPPP 238

Query: 806  XXXXXXXXXXXXXXXXXXXXXXXALFAQINQGESITHALKHVSDDMKTHKTPAFKARSGP 985
                                   ALFAQ+NQGE IT  L+HV+DD KTHK P+ +A  G 
Sbjct: 239  PPPGPPPFFENEGRREESSPSRSALFAQLNQGEEITKGLRHVTDDQKTHKNPSLRAPGGQ 298

Query: 986  VQTGPK 1003
              +  K
Sbjct: 299  TPSPTK 304


>ref|XP_856592.1| PREDICTED: similar to CAP, adenylate cyclase-associated protein 1
            isoform 6 [Canis familiaris].
          Length = 326

 Score =  125 bits (315), Expect = 5e-29
 Identities = 70/134 (52%), Positives = 76/134 (56%)
 Frame = +2

Query: 686  LQAYIKEFHTTGLAWSKTGPVAKELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 865
            LQAYIKEFHTTGLAWSKTGPVA+EL                                   
Sbjct: 44   LQAYIKEFHTTGLAWSKTGPVAQELSGLPSGPSAGSGPPPPPPGPPPPPVPTSSGSDESA 103

Query: 866  XXXALFAQINQGESITHALKHVSDDMKTHKTPAFKARSGPVQTGPKPFFASKLEIXXXXX 1045
               ALFAQINQGESITHALKHVSDDMKTHK PA KA+SGPV++GPKPF A K  +     
Sbjct: 104  SRSALFAQINQGESITHALKHVSDDMKTHKNPALKAQSGPVRSGPKPFSAPKPGVSPSPK 163

Query: 1046 XXXXXXXXLLRLEG 1087
                    +L LEG
Sbjct: 164  PTAKKEPAVLELEG 177



 Score = 88.2 bits (217), Expect = 1e-17
 Identities = 42/47 (89%), Positives = 44/47 (93%)
 Frame = +2

Query: 116 MADMQNLVERLERAVGRLEAVSHASDTHCGYGDSAAKAGAAPYVQAF 256
           MADMQ LVERLERAVGRLEAVSHASD HCGYGDSA KAGAAPY+QA+
Sbjct: 1   MADMQKLVERLERAVGRLEAVSHASDMHCGYGDSAPKAGAAPYLQAY 47


>ref|XP_856556.1| PREDICTED: similar to CAP, adenylate cyclase-associated protein 1
            isoform 5 [Canis familiaris].
          Length = 272

 Score = 91.3 bits (225), Expect = 1e-18
 Identities = 46/71 (64%), Positives = 51/71 (71%)
 Frame = +2

Query: 875  ALFAQINQGESITHALKHVSDDMKTHKTPAFKARSGPVQTGPKPFFASKLEIXXXXXXXX 1054
            ALFAQINQGESITHALKHVSDDMKTHK PA KA+SGPV++GPKPF A K  +        
Sbjct: 53   ALFAQINQGESITHALKHVSDDMKTHKNPALKAQSGPVRSGPKPFSAPKPGVSPSPKPTA 112

Query: 1055 XXXXXLLRLEG 1087
                 +L LEG
Sbjct: 113  KKEPAVLELEG 123


>ref|XP_856509.1| PREDICTED: similar to CAP, adenylate cyclase-associated protein 1
            isoform 4 [Canis familiaris].
          Length = 218

 Score = 64.3 bits (155), Expect = 2e-10
 Identities = 32/57 (56%), Positives = 37/57 (64%)
 Frame = +2

Query: 917  ALKHVSDDMKTHKTPAFKARSGPVQTGPKPFFASKLEIXXXXXXXXXXXXXLLRLEG 1087
            ALKHVSDDMKTHK PA KA+SGPV++GPKPF A K  +             +L LEG
Sbjct: 13   ALKHVSDDMKTHKNPALKAQSGPVRSGPKPFSAPKPGVSPSPKPTAKKEPAVLELEG 69


>ref|XP_858406.1| PREDICTED: similar to adenylyl cyclase-associated protein 2 isoform
           2 [Canis familiaris].
          Length = 82

 Score = 61.6 bits (148), Expect = 1e-09
 Identities = 35/73 (47%), Positives = 47/73 (64%), Gaps = 4/73 (5%)
 Frame = +2

Query: 125 MQNLVERLERAVGRLEAVSHASDTHCGYGD----SAAKAGAAPYVQAFDSLLAGPVAEYL 292
           MQ L+ERLER VGRLE +S  +++H   GD    +    G AP V+AFD L+   VAE+L
Sbjct: 1   MQGLMERLERVVGRLEVLS--AESHRPPGDFGEINGVNGGVAPSVEAFDKLMNSMVAEFL 58

Query: 293 KISKEIGGDVQKH 331
           K S+ + GDV+ H
Sbjct: 59  KKSRILAGDVETH 71


  Database: RefSeq49_CP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,874,504
  Number of sequences in database:  33,336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 44,793,905
Number of extensions: 1194734
Number of successful extensions: 4488
Number of sequences better than 1.0e-05: 9
Number of HSP's gapped: 4388
Number of HSP's successfully gapped: 13
Length of query: 363
Length of database: 18,874,504
Length adjustment: 104
Effective length of query: 259
Effective length of database: 15,407,560
Effective search space: 3990558040
Effective search space used: 3990558040
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

Search to RefSeqHP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-007217
         (1089 letters)

Database: RefSeq49_HP.fasta 
           32,964 sequences; 18,297,164 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001099000.1| adenylyl cyclase-associated protein 1 [Homo ...   447   e-125
Alignment   gi|NP_006358.1| adenylyl cyclase-associated protein 1 [Homo sap...   447   e-125
Alignment   gi|NP_006357.1| adenylyl cyclase-associated protein 2 [Homo sap...   285   7e-77

>ref|NP_001099000.1| adenylyl cyclase-associated protein 1 [Homo sapiens].
          Length = 475

 Score =  447 bits (1149), Expect = e-125
 Identities = 239/326 (73%), Positives = 248/326 (76%), Gaps = 2/326 (0%)
 Frame = +2

Query: 116  MADMQNLVERLERAVGRLEAVSHASDTHCGYGDSAAKAGAAPYVQAFDSLLAGPVAEYLK 295
            MADMQNLVERLERAVGRLEAVSH SD H GY DS +KAGAAPYVQAFDSLLAGPVAEYLK
Sbjct: 1    MADMQNLVERLERAVGRLEAVSHTSDMHRGYADSPSKAGAAPYVQAFDSLLAGPVAEYLK 60

Query: 296  ISKEIGGDVQKHAEMVHTGLKLEQGLLVTASQCQQP--NKLSELLAPISEQIQEVITFRE 469
            ISKEIGGDVQKHAEMVHTGLKLE+ LLVTASQCQQP  NKLS+LLAPISEQI+EVITFRE
Sbjct: 61   ISKEIGGDVQKHAEMVHTGLKLERALLVTASQCQQPAENKLSDLLAPISEQIKEVITFRE 120

Query: 470  KNRGSKLFNHLSAVSESIQALGWVAMAPKPGPYVKEMNDAAMFYTNRVLKEYXXXXXXXX 649
            KNRGSKLFNHLSAVSESIQALGWVAMAPKPGPYVKEMNDAAMFYTNRVLKEY        
Sbjct: 121  KNRGSKLFNHLSAVSESIQALGWVAMAPKPGPYVKEMNDAAMFYTNRVLKEYKDVDKKHV 180

Query: 650  XXXXAYLSIWTELQAYIKEFHTTGLAWSKTGPVAKELXXXXXXXXXXXXXXXXXXXXXXX 829
                AYLSIWTELQAYIKEFHTTGLAWSKTGPVAKEL                       
Sbjct: 181  DWVKAYLSIWTELQAYIKEFHTTGLAWSKTGPVAKELSGLPSGPSAGSGPPPPPPGPPPP 240

Query: 830  XXXXXXXXXXXXXXXALFAQINQGESITHALKHVSDDMKTHKTPAFKARSGPVQTGPKPF 1009
                           ALFAQINQGESITHALKHVSDDMKTHK PA KA+SGPV++GPKPF
Sbjct: 241  PVSTSSGSDESASRSALFAQINQGESITHALKHVSDDMKTHKNPALKAQSGPVRSGPKPF 300

Query: 1010 FASKLEIXXXXXXXXXXXXXLLRLEG 1087
             A K +              +L LEG
Sbjct: 301  SAPKPQTSPSPKRATKKEPAVLELEG 326


>ref|NP_006358.1| adenylyl cyclase-associated protein 1 [Homo sapiens].
          Length = 475

 Score =  447 bits (1149), Expect = e-125
 Identities = 239/326 (73%), Positives = 248/326 (76%), Gaps = 2/326 (0%)
 Frame = +2

Query: 116  MADMQNLVERLERAVGRLEAVSHASDTHCGYGDSAAKAGAAPYVQAFDSLLAGPVAEYLK 295
            MADMQNLVERLERAVGRLEAVSH SD H GY DS +KAGAAPYVQAFDSLLAGPVAEYLK
Sbjct: 1    MADMQNLVERLERAVGRLEAVSHTSDMHRGYADSPSKAGAAPYVQAFDSLLAGPVAEYLK 60

Query: 296  ISKEIGGDVQKHAEMVHTGLKLEQGLLVTASQCQQP--NKLSELLAPISEQIQEVITFRE 469
            ISKEIGGDVQKHAEMVHTGLKLE+ LLVTASQCQQP  NKLS+LLAPISEQI+EVITFRE
Sbjct: 61   ISKEIGGDVQKHAEMVHTGLKLERALLVTASQCQQPAENKLSDLLAPISEQIKEVITFRE 120

Query: 470  KNRGSKLFNHLSAVSESIQALGWVAMAPKPGPYVKEMNDAAMFYTNRVLKEYXXXXXXXX 649
            KNRGSKLFNHLSAVSESIQALGWVAMAPKPGPYVKEMNDAAMFYTNRVLKEY        
Sbjct: 121  KNRGSKLFNHLSAVSESIQALGWVAMAPKPGPYVKEMNDAAMFYTNRVLKEYKDVDKKHV 180

Query: 650  XXXXAYLSIWTELQAYIKEFHTTGLAWSKTGPVAKELXXXXXXXXXXXXXXXXXXXXXXX 829
                AYLSIWTELQAYIKEFHTTGLAWSKTGPVAKEL                       
Sbjct: 181  DWVKAYLSIWTELQAYIKEFHTTGLAWSKTGPVAKELSGLPSGPSAGSGPPPPPPGPPPP 240

Query: 830  XXXXXXXXXXXXXXXALFAQINQGESITHALKHVSDDMKTHKTPAFKARSGPVQTGPKPF 1009
                           ALFAQINQGESITHALKHVSDDMKTHK PA KA+SGPV++GPKPF
Sbjct: 241  PVSTSSGSDESASRSALFAQINQGESITHALKHVSDDMKTHKNPALKAQSGPVRSGPKPF 300

Query: 1010 FASKLEIXXXXXXXXXXXXXLLRLEG 1087
             A K +              +L LEG
Sbjct: 301  SAPKPQTSPSPKRATKKEPAVLELEG 326


>ref|NP_006357.1| adenylyl cyclase-associated protein 2 [Homo sapiens].
          Length = 477

 Score =  285 bits (728), Expect = 7e-77
 Identities = 157/305 (51%), Positives = 196/305 (64%), Gaps = 9/305 (2%)
 Frame = +2

Query: 116  MADMQNLVERLERAVGRLEAVS---HASDTHCGYGDSAAKAGAAPYVQAFDSLLAGPVAE 286
            MA+MQ LVERLERAV RLE++S   H    +CG  +    AG AP V+AFD L+   VAE
Sbjct: 1    MANMQGLVERLERAVSRLESLSAESHRPPGNCGEVNGVI-AGVAPSVEAFDKLMDSMVAE 59

Query: 287  YLKISKEIGGDVQKHAEMVHTGLKLEQGLLVTASQCQQP--NKLSELLAPISEQIQEVIT 460
            +LK S+ + GDV+ HAEMVH+  + ++  L+ ASQ QQP  N ++ LL PISE+IQE+ T
Sbjct: 60   FLKNSRILAGDVETHAEMVHSAFQAQRAFLLMASQYQQPHENDVAALLKPISEKIQEIQT 119

Query: 461  FREKNRGSKLFNHLSAVSESIQALGWVAMAPKPGPYVKEMNDAAMFYTNRVLKEYXXXXX 640
            FRE+NRGS +FNHLSAVSESI ALGW+A++PKPGPYVKEMNDAA FYTNRVLK+Y     
Sbjct: 120  FRERNRGSNMFNHLSAVSESIPALGWIAVSPKPGPYVKEMNDAATFYTNRVLKDYKHSDL 179

Query: 641  XXXXXXXAYLSIWTELQAYIKEFHTTGLAWSKTGPVAKEL----XXXXXXXXXXXXXXXX 808
                   +YL+IW+ELQAYIKE HTTGL WSKTGPVA  +                    
Sbjct: 180  RHVDWVKSYLNIWSELQAYIKEHHTTGLTWSKTGPVASTVSAFSVLSSGPGLPPPPPPLP 239

Query: 809  XXXXXXXXXXXXXXXXXXXXXXALFAQINQGESITHALKHVSDDMKTHKTPAFKARSGPV 988
                                  ALFAQ+NQGE+IT  L+HV+DD KT+K P+ +A+ G  
Sbjct: 240  PPGPPPLFENEGKKEESSPSRSALFAQLNQGEAITKGLRHVTDDQKTYKNPSLRAQGGQT 299

Query: 989  QTGPK 1003
            Q+  K
Sbjct: 300  QSPTK 304


  Database: RefSeq49_HP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,297,164
  Number of sequences in database:  32,964
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 44,035,393
Number of extensions: 1180064
Number of successful extensions: 3878
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 3858
Number of HSP's successfully gapped: 4
Length of query: 363
Length of database: 18,297,164
Length adjustment: 104
Effective length of query: 259
Effective length of database: 14,868,908
Effective search space: 3851047172
Effective search space used: 3851047172
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

Search to RefSeqMP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-007217
         (1089 letters)

Database: RefSeq49_MP.fasta 
           30,036 sequences; 15,617,559 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_031624.2| adenylyl cyclase-associated protein 1 [Mus musc...   436   e-122
Alignment   gi|NP_080332.1| adenylyl cyclase-associated protein 2 [Mus musc...   267   9e-72

>ref|NP_031624.2| adenylyl cyclase-associated protein 1 [Mus musculus].
          Length = 474

 Score =  436 bits (1122), Expect = e-122
 Identities = 234/326 (71%), Positives = 244/326 (74%), Gaps = 2/326 (0%)
 Frame = +2

Query: 116  MADMQNLVERLERAVGRLEAVSHASDTHCGYGDSAAKAGAAPYVQAFDSLLAGPVAEYLK 295
            MADMQNLVERLERAVGRLEAVSH SD HCGYGDS +K GA PYVQAFDSLLA PVAEYLK
Sbjct: 1    MADMQNLVERLERAVGRLEAVSHTSDMHCGYGDSPSK-GAVPYVQAFDSLLANPVAEYLK 59

Query: 296  ISKEIGGDVQKHAEMVHTGLKLEQGLLVTASQCQQP--NKLSELLAPISEQIQEVITFRE 469
            +SKEIGGDVQKHAEMVHTGLKLE+ LL TASQCQQP  NKLS+LLAPISEQIQEVITFRE
Sbjct: 60   MSKEIGGDVQKHAEMVHTGLKLERALLATASQCQQPAGNKLSDLLAPISEQIQEVITFRE 119

Query: 470  KNRGSKLFNHLSAVSESIQALGWVAMAPKPGPYVKEMNDAAMFYTNRVLKEYXXXXXXXX 649
            KNRGSK FNHLSAVSESIQALGWVA+A KPGP+VKEMNDAAMFYTNRVLKEY        
Sbjct: 120  KNRGSKFFNHLSAVSESIQALGWVALAAKPGPFVKEMNDAAMFYTNRVLKEYRDVDKKHV 179

Query: 650  XXXXAYLSIWTELQAYIKEFHTTGLAWSKTGPVAKELXXXXXXXXXXXXXXXXXXXXXXX 829
                AYLSIWTELQAYIKEFHTTGLAWSKTGPVAKEL                       
Sbjct: 180  DWVRAYLSIWTELQAYIKEFHTTGLAWSKTGPVAKELSGLPSGPSVGSGPPPPPPGPPPP 239

Query: 830  XXXXXXXXXXXXXXXALFAQINQGESITHALKHVSDDMKTHKTPAFKARSGPVQTGPKPF 1009
                           ALFAQINQGESITHALKHVSDDMKTHK PA KA+SGPV++GPKPF
Sbjct: 240  PISTSSGSDDSASRSALFAQINQGESITHALKHVSDDMKTHKNPALKAQSGPVRSGPKPF 299

Query: 1010 FASKLEIXXXXXXXXXXXXXLLRLEG 1087
             A K +              LL LEG
Sbjct: 300  SAPKPQTSPSPKPATKKEPALLELEG 325


>ref|NP_080332.1| adenylyl cyclase-associated protein 2 [Mus musculus].
          Length = 476

 Score =  267 bits (683), Expect = 9e-72
 Identities = 149/295 (50%), Positives = 186/295 (63%), Gaps = 8/295 (2%)
 Frame = +2

Query: 116 MADMQNLVERLERAVGRLEAVSHASD-THCGYGD-SAAKAGAAPYVQAFDSLLAGPVAEY 289
           M DM  L+ERLERAV RLE +S   D    G G+ +    G AP V+AFD L+   VAE+
Sbjct: 1   MTDMAGLMERLERAVIRLEQLSAGLDGPPRGCGEVNGVNGGVAPSVEAFDKLINSMVAEF 60

Query: 290 LKISKEIGGDVQKHAEMVHTGLKLEQGLLVTASQCQQP--NKLSELLAPISEQIQEVITF 463
           LK S+ + GDV+ HAEMVH   + ++  L+  SQ QQP  N+++ LL PISE+IQE+ TF
Sbjct: 61  LKNSRVLAGDVETHAEMVHGAFQAQRAFLLMVSQYQQPQENEVAVLLKPISEKIQEIQTF 120

Query: 464 REKNRGSKLFNHLSAVSESIQALGWVAMAPKPGPYVKEMNDAAMFYTNRVLKEYXXXXXX 643
           RE+NRGS +FNHLSAVSESI ALGW+A++PKPGPYVKEMNDAA FYTNRVLK+Y      
Sbjct: 121 RERNRGSNMFNHLSAVSESIAALGWIAVSPKPGPYVKEMNDAATFYTNRVLKDYKHSDLR 180

Query: 644 XXXXXXAYLSIWTELQAYIKEFHTTGLAWSKTGPVAKEL----XXXXXXXXXXXXXXXXX 811
                 +YL+IW+ELQAYI+E HTTGL WSKTGPVA                        
Sbjct: 181 HVDWVRSYLNIWSELQAYIREHHTTGLTWSKTGPVASTASAFSILSSGPGLPPPPPPPPP 240

Query: 812 XXXXXXXXXXXXXXXXXXXXXALFAQINQGESITHALKHVSDDMKTHKTPAFKAR 976
                                ALFAQ+NQGE+IT  L+HV+DD KT+K P+ +A+
Sbjct: 241 PGPPPPFENEDKKEEPSPSRSALFAQLNQGEAITKGLRHVTDDKKTYKNPSLRAQ 295


  Database: RefSeq49_MP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 15,617,559
  Number of sequences in database:  30,036
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 37,358,537
Number of extensions: 994172
Number of successful extensions: 3221
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 3206
Number of HSP's successfully gapped: 3
Length of query: 363
Length of database: 15,617,559
Length adjustment: 103
Effective length of query: 260
Effective length of database: 12,523,851
Effective search space: 3256201260
Effective search space used: 3256201260
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)

Search to RefSeqSP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-007217
         (1089 letters)

Database: RefSeq49_SP.fasta 
           24,897 sequences; 11,343,932 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_003127870.1| PREDICTED: adenylyl cyclase-associated prote...   335   3e-92
Alignment   gi|XP_003127872.2| PREDICTED: zinc finger protein Rlf-like, par...   287   8e-78
Alignment   gi|XP_003361634.1| PREDICTED: adenylyl cyclase-associated prote...   169   2e-42
Alignment   gi|XP_003356378.1| PREDICTED: adenylyl cyclase-associated prote...    96   3e-20

>ref|XP_003127870.1| PREDICTED: adenylyl cyclase-associated protein 1-like [Sus scrofa].
          Length = 173

 Score =  335 bits (858), Expect = 3e-92
 Identities = 169/170 (99%), Positives = 169/170 (99%)
 Frame = +2

Query: 116 MADMQNLVERLERAVGRLEAVSHASDTHCGYGDSAAKAGAAPYVQAFDSLLAGPVAEYLK 295
           MADMQNLVERLERAVGRLEAVSHASDTHCGYGDSAAKAGAAPYVQAFDSLLAGPVAEYLK
Sbjct: 1   MADMQNLVERLERAVGRLEAVSHASDTHCGYGDSAAKAGAAPYVQAFDSLLAGPVAEYLK 60

Query: 296 ISKEIGGDVQKHAEMVHTGLKLEQGLLVTASQCQQPNKLSELLAPISEQIQEVITFREKN 475
           ISKEIGGDVQKHAEMVHTGLKLEQ LLVTASQCQQPNKLSELLAPISEQIQEVITFREKN
Sbjct: 61  ISKEIGGDVQKHAEMVHTGLKLEQALLVTASQCQQPNKLSELLAPISEQIQEVITFREKN 120

Query: 476 RGSKLFNHLSAVSESIQALGWVAMAPKPGPYVKEMNDAAMFYTNRVLKEY 625
           RGSKLFNHLSAVSESIQALGWVAMAPKPGPYVKEMNDAAMFYTNRVLKEY
Sbjct: 121 RGSKLFNHLSAVSESIQALGWVAMAPKPGPYVKEMNDAAMFYTNRVLKEY 170


>ref|XP_003127872.2| PREDICTED: zinc finger protein Rlf-like, partial [Sus scrofa].
          Length = 1526

 Score =  287 bits (734), Expect = 8e-78
 Identities = 156/227 (68%), Positives = 158/227 (69%)
 Frame = +2

Query: 407  KLSELLAPISEQIQEVITFREKNRGSKLFNHLSAVSESIQALGWVAMAPKPGPYVKEMND 586
            KLSELLAPISEQIQEVITFREKNRGSKLFNHLSAVSESIQALGWVAMAPKPGPYVKEMND
Sbjct: 1151 KLSELLAPISEQIQEVITFREKNRGSKLFNHLSAVSESIQALGWVAMAPKPGPYVKEMND 1210

Query: 587  AAMFYTNRVLKEYXXXXXXXXXXXXAYLSIWTELQAYIKEFHTTGLAWSKTGPVAKELXX 766
            AAMFYTNRVLKEY            AYLSIWTELQAYIKEFHTTGLAWSKTGPVAKEL  
Sbjct: 1211 AAMFYTNRVLKEYKDVDKKHVDWVKAYLSIWTELQAYIKEFHTTGLAWSKTGPVAKELSG 1270

Query: 767  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALFAQINQGESITHALKHVSDDMK 946
                                                ALFAQINQGESITHALKHVSDDMK
Sbjct: 1271 LPSGPSAGSGPPPPPPGPPPPPVPTSSGSDESASRSALFAQINQGESITHALKHVSDDMK 1330

Query: 947  THKTPAFKARSGPVQTGPKPFFASKLEIXXXXXXXXXXXXXLLRLEG 1087
            THK PA KA+SGPV+TGPKPF ASK  I             LL LEG
Sbjct: 1331 THKNPALKAQSGPVRTGPKPFSASKPGISPSPKPVTKKEPALLELEG 1377


>ref|XP_003361634.1| PREDICTED: adenylyl cyclase-associated protein 2-like, partial [Sus
           scrofa].
          Length = 283

 Score =  169 bits (428), Expect = 2e-42
 Identities = 82/123 (66%), Positives = 96/123 (78%)
 Frame = +2

Query: 371 LLVTASQCQQPNKLSELLAPISEQIQEVITFREKNRGSKLFNHLSAVSESIQALGWVAMA 550
           +LVT       N ++ LL PISE+IQE+ TFRE+NRGSK+FNHLSAVSESI ALGW+A++
Sbjct: 9   ILVTVPNVCLQNDVAALLKPISEKIQEIQTFRERNRGSKMFNHLSAVSESIPALGWIAVS 68

Query: 551 PKPGPYVKEMNDAAMFYTNRVLKEYXXXXXXXXXXXXAYLSIWTELQAYIKEFHTTGLAW 730
           PKPGPYVKEMNDAA FYTNRVLK+Y            +YL+IW+ELQAYIKE HTTGL W
Sbjct: 69  PKPGPYVKEMNDAATFYTNRVLKDYKHSDLRHVDWVKSYLNIWSELQAYIKEHHTTGLTW 128

Query: 731 SKT 739
           SKT
Sbjct: 129 SKT 131


>ref|XP_003356378.1| PREDICTED: adenylyl cyclase-associated protein 1-like [Sus scrofa].
          Length = 294

 Score = 96.3 bits (238), Expect = 3e-20
 Identities = 50/71 (70%), Positives = 52/71 (73%)
 Frame = +2

Query: 875  ALFAQINQGESITHALKHVSDDMKTHKTPAFKARSGPVQTGPKPFFASKLEIXXXXXXXX 1054
            ALFAQINQGESITHALKHVSDDMKTHK PA KA+SGPV+TGPKPF ASK  I        
Sbjct: 75   ALFAQINQGESITHALKHVSDDMKTHKNPALKAQSGPVRTGPKPFSASKPGISPSPKPVT 134

Query: 1055 XXXXXLLRLEG 1087
                 LL LEG
Sbjct: 135  KKEPALLELEG 145


  Database: RefSeq49_SP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 11,343,932
  Number of sequences in database:  24,897
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 27,752,061
Number of extensions: 750110
Number of successful extensions: 2544
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 2541
Number of HSP's successfully gapped: 4
Length of query: 363
Length of database: 11,343,932
Length adjustment: 100
Effective length of query: 263
Effective length of database: 8,854,232
Effective search space: 2328663016
Effective search space used: 2328663016
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)

Search to Sscrofa10_2

BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-007217
         (1089 letters)

Database: Sscrofa_10.2.fasta 
           4582 sequences; 2,808,509,378 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Sscrofa_Chr06                                                         317   7e-84

>Sscrofa_Chr06 
||          Length = 157765593

 Score =  317 bits (160), Expect = 7e-84
 Identities = 177/180 (98%), Gaps = 2/180 (1%)
 Strand = Plus / Minus

                                                                            
Query: 739      ggggcccgtggctaaagaactgagtggattgccatctggaccctctgctggatcgggtcc 798
                |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 89306288 ggggcccgtggctaaagaactgagtggattgccatctggaccctctgctggatcaggtcc 89306229

                                                                            
Query: 799      tcctcctcctccaccagggcccacctc-gcccccagtccccaccagttcaggctcagatg 857
                |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct: 89306228 tcctcctcctccaccagg-cccacctccgcccccagtccccaccagttcaggctcagatg 89306170

                                                                            
Query: 858      agtctgcctcacgctcagcactgtttgcgcagattaatcaaggggagagcatcacacacg 917
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89306169 agtctgcctcacgctcagcactgtttgcgcagattaatcaaggggagagcatcacacacg 89306110



 Score =  309 bits (156), Expect = 2e-81
 Identities = 176/180 (97%), Gaps = 2/180 (1%)
 Strand = Plus / Minus

                                                                            
Query: 739      ggggcccgtggctaaagaactgagtggattgccatctggaccctctgctggatcgggtcc 798
                |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 89128048 ggggcccgtggctaaagaactgagtggattgccatctggaccctctgctggatcaggtcc 89127989

                                                                            
Query: 799      tcctcctcctccaccagggcccacctcg-cccccagtccccaccagttcaggctcagatg 857
                |||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||
Sbjct: 89127988 tcctcctcctccaccagg-cccacctcctcccccagtccccaccagttcaggctcagatg 89127930

                                                                            
Query: 858      agtctgcctcacgctcagcactgtttgcgcagattaatcaaggggagagcatcacacacg 917
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89127929 agtctgcctcacgctcagcactgtttgcgcagattaatcaaggggagagcatcacacacg 89127870



 Score =  287 bits (145), Expect = 6e-75
 Identities = 145/145 (100%)
 Strand = Plus / Plus

                                                                            
Query: 404      aataagctttctgaattgttggcacccatctccgagcagatccaagaagtaataaccttt 463
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89023930 aataagctttctgaattgttggcacccatctccgagcagatccaagaagtaataaccttt 89023989

                                                                            
Query: 464      cgggagaagaaccgaggcagcaagttgttcaatcacctgtcagctgtcagtgaaagcatc 523
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89023990 cgggagaagaaccgaggcagcaagttgttcaatcacctgtcagctgtcagtgaaagcatc 89024049

                                         
Query: 524      caggccctgggttgggtggctatgg 548
                |||||||||||||||||||||||||
Sbjct: 89024050 caggccctgggttgggtggctatgg 89024074



 Score =  281 bits (142), Expect = 4e-73
 Identities = 142/142 (100%)
 Strand = Plus / Minus

                                                                            
Query: 407      aagctttctgaattgttggcacccatctccgagcagatccaagaagtaataacctttcgg 466
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89309905 aagctttctgaattgttggcacccatctccgagcagatccaagaagtaataacctttcgg 89309846

                                                                            
Query: 467      gagaagaaccgaggcagcaagttgttcaatcacctgtcagctgtcagtgaaagcatccag 526
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89309845 gagaagaaccgaggcagcaagttgttcaatcacctgtcagctgtcagtgaaagcatccag 89309786

                                      
Query: 527      gccctgggttgggtggctatgg 548
                ||||||||||||||||||||||
Sbjct: 89309785 gccctgggttgggtggctatgg 89309764



 Score =  246 bits (124), Expect = 2e-62
 Identities = 124/124 (100%)
 Strand = Plus / Plus

                                                                            
Query: 104      aggtggtacattatggctgacatgcaaaatctggtagaaagattggagagagcagtgggc 163
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89018687 aggtggtacattatggctgacatgcaaaatctggtagaaagattggagagagcagtgggc 89018746

                                                                            
Query: 164      cgcctggaggcagtctcccatgcctctgacacacactgtggatatggagacagtgctgca 223
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89018747 cgcctggaggcagtctcccatgcctctgacacacactgtggatatggagacagtgctgca 89018806

                    
Query: 224      aaag 227
                ||||
Sbjct: 89018807 aaag 89018810



 Score =  214 bits (108), Expect = 8e-53
 Identities = 108/108 (100%)
 Strand = Plus / Plus

                                                                            
Query: 1        ccgcgcccagtgagggcccggaagtgggtcgcgcgaagattgctgggcggttcttgccgg 60
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89004574 ccgcgcccagtgagggcccggaagtgggtcgcgcgaagattgctgggcggttcttgccgg 89004633

                                                                
Query: 61       aagtggagagcggctgatcgcagtcccgaggtgaggaactctgaggtg 108
                ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89004634 aagtggagagcggctgatcgcagtcccgaggtgaggaactctgaggtg 89004681



 Score =  212 bits (107), Expect = 3e-52
 Identities = 107/107 (100%)
 Strand = Plus / Plus

                                                                            
Query: 226      agcaggagcagctccgtatgtgcaagcatttgactcactgctggccggtcctgtggcgga 285
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89019710 agcaggagcagctccgtatgtgcaagcatttgactcactgctggccggtcctgtggcgga 89019769

                                                               
Query: 286      atacctcaagatcagtaaagagattgggggagatgtgcagaaacatg 332
                |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89019770 atacctcaagatcagtaaagagattgggggagatgtgcagaaacatg 89019816



 Score =  212 bits (107), Expect = 3e-52
 Identities = 107/107 (100%)
 Strand = Plus / Minus

                                                                            
Query: 634      ggataagaagcacgtggactgggtcaaagcttacttgagtatatggacagagctgcaggc 693
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89307703 ggataagaagcacgtggactgggtcaaagcttacttgagtatatggacagagctgcaggc 89307644

                                                               
Query: 694      ttacattaaggagttccatacgactggactggcctggagcaaaacgg 740
                |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89307643 ttacattaaggagttccatacgactggactggcctggagcaaaacgg 89307597



 Score =  200 bits (101), Expect = 1e-48
 Identities = 155/173 (89%)
 Strand = Plus / Minus

                                                                            
Query: 917      gccctgaaacacgtatccgatgacatgaagactcacaaaacccctgcttttaaagctcga 976
                |||||||||||||||||||||||||||||||||||||| | ||||||||| || ||||  
Sbjct: 89125791 gccctgaaacacgtatccgatgacatgaagactcacaagaaccctgctttgaaggctcag 89125732

                                                                            
Query: 977      agtgggcccgtccaaactggccccaaaccattctttgcatctaaacttgaaatcagccca 1036
                ||||||||||| | |||||||||||||||||||| ||||||||||| || ||||||||||
Sbjct: 89125731 agtgggcccgtacgaactggccccaaaccattctctgcatctaaacctggaatcagccca 89125672

                                                                     
Query: 1037     tcccccaaaccagtcccaaaaaaggaaccgcctctacttagactggagggcaa 1089
                ||||||||||||||| |||| ||||| ||  ||||||||  ||||||||||||
Sbjct: 89125671 tcccccaaaccagtcacaaagaaggagccagctctacttgaactggagggcaa 89125619



 Score =  200 bits (101), Expect = 1e-48
 Identities = 155/173 (89%)
 Strand = Plus / Minus

                                                                            
Query: 917      gccctgaaacacgtatccgatgacatgaagactcacaaaacccctgcttttaaagctcga 976
                |||||||||||||||||||||||||||||||||||||| | ||||||||| || ||||  
Sbjct: 89304025 gccctgaaacacgtatccgatgacatgaagactcacaagaaccctgctttgaaggctcag 89303966

                                                                            
Query: 977      agtgggcccgtccaaactggccccaaaccattctttgcatctaaacttgaaatcagccca 1036
                ||||||||||| | |||||||||||||||||||| ||||||||||| || ||||||||||
Sbjct: 89303965 agtgggcccgtacgaactggccccaaaccattctctgcatctaaacctggaatcagccca 89303906

                                                                     
Query: 1037     tcccccaaaccagtcccaaaaaaggaaccgcctctacttagactggagggcaa 1089
                ||||||||||||||| |||| ||||| ||  ||||||||  ||||||||||||
Sbjct: 89303905 tcccccaaaccagtcacaaagaaggagccagctctacttgaactggagggcaa 89303853



 Score =  174 bits (88), Expect = 7e-41
 Identities = 88/88 (100%)
 Strand = Plus / Plus

                                                                            
Query: 547      ggctcccaagcctggtccctatgtgaaggaaatgaatgatgctgccatgttttatacaaa 606
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89024174 ggctcccaagcctggtccctatgtgaaggaaatgaatgatgctgccatgttttatacaaa 89024233

                                            
Query: 607      ccgagtcctcaaggagtacaaagatgtg 634
                ||||||||||||||||||||||||||||
Sbjct: 89024234 ccgagtcctcaaggagtacaaagatgtg 89024261



 Score =  174 bits (88), Expect = 7e-41
 Identities = 88/88 (100%)
 Strand = Plus / Minus

                                                                            
Query: 547      ggctcccaagcctggtccctatgtgaaggaaatgaatgatgctgccatgttttatacaaa 606
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89309664 ggctcccaagcctggtccctatgtgaaggaaatgaatgatgctgccatgttttatacaaa 89309605

                                            
Query: 607      ccgagtcctcaaggagtacaaagatgtg 634
                ||||||||||||||||||||||||||||
Sbjct: 89309604 ccgagtcctcaaggagtacaaagatgtg 89309577



 Score =  135 bits (68), Expect = 6e-29
 Identities = 71/72 (98%)
 Strand = Plus / Plus

                                                                            
Query: 332      gcggaaatggtccatacaggtctgaagttggagcaaggtctcttggttacagcctctcag 391
                ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 89021556 gcggaaatggtccatacaggtctgaagttggagcaagctctcttggttacagcctctcag 89021615

                            
Query: 392      tgccagcagcct 403
                ||||||||||||
Sbjct: 89021616 tgccagcagcct 89021627


  Database: Sscrofa_10.2.fasta
    Posted date:  Nov 16, 2011 10:34 AM
  Number of letters in database: 2,808,509,378
  Number of sequences in database:  4582
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 30,408,005
Number of extensions: 270
Number of successful extensions: 270
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 268
Number of HSP's successfully gapped: 13
Length of query: 1089
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1068
Effective length of database: 2,808,413,156
Effective search space: 2999385250608
Effective search space used: 2999385250608
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)