Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007218
(1618 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001030182.1| adenylyl cyclase-associated protein 1 [Bos t... 783 0.0
Alignment gi|XP_002691825.1| PREDICTED: CAP1 protein-like [Bos taurus]. 756 0.0
Alignment gi|XP_600414.2| PREDICTED: CAP1 protein-like isoform 2 [Bos tau... 756 0.0
Alignment gi|NP_001092449.1| adenylyl cyclase-associated protein 2 [Bos t... 525 e-149
>ref|NP_001030182.1| adenylyl cyclase-associated protein 1 [Bos taurus].
Length = 472
Score = 783 bits (2023), Expect = 0.0
Identities = 401/475 (84%), Positives = 414/475 (87%)
Frame = +2
Query: 74 MADMQNLVERLERAVGRLEAVSHASDTHCGYGDSAAKAGAAPYVQAFDSLLAGPVAEYLK 253
MADM+NLVERLER VGRLEAVSHASDTHCGYGDSAAKAG PYVQAFDSLLAGPVAEYLK
Sbjct: 1 MADMRNLVERLERVVGRLEAVSHASDTHCGYGDSAAKAGTTPYVQAFDSLLAGPVAEYLK 60
Query: 254 ISKEIGGDVQKHAEMVHTGLKLEQALLVTASQCQQPVGNKLSELLAPISEQIQEVITFRE 433
ISKEIGGDVQKHAEMVHTGLKLE+ALLVTASQCQQP GNKLS+LLAPISEQIQEV+TFRE
Sbjct: 61 ISKEIGGDVQKHAEMVHTGLKLERALLVTASQCQQPAGNKLSDLLAPISEQIQEVVTFRE 120
Query: 434 KNRGSKLFNHLSAVSESIQALGWVAMAPKPGPYVKEMNDAAMFYTNRVLKEYXXXXXXXX 613
KNRGSKLFNHLSAVSESIQALGWVAMAPKPGPYVKEMNDAAMFYTNRVLKEY
Sbjct: 121 KNRGSKLFNHLSAVSESIQALGWVAMAPKPGPYVKEMNDAAMFYTNRVLKEYKDVDKKHV 180
Query: 614 XXXXAYLSIWTELQAYIKEFHTTGLAWSKTGPVAKELXXXXXXXXXXXXXXXXXXXXXXX 793
AYLSIWTELQAYIKEFHTTGLAWS+TGPVAKEL
Sbjct: 181 DWVKAYLSIWTELQAYIKEFHTTGLAWSRTGPVAKELSGLPSGPSAGSGPPPPPPGPPPP 240
Query: 794 XXXXXXXXXXXXXXXALFAQINQGESITHALKHVSDDMKTHKNPALKAQSGPVRTGPKPF 973
ALFAQINQGESITHALKHVSDDMKTHKNPALKAQSG +R+GPKPF
Sbjct: 241 PVPTSSGSDDSASRSALFAQINQGESITHALKHVSDDMKTHKNPALKAQSGLIRSGPKPF 300
Query: 974 SASKPGISPSPKPVTKKEPALLELEGKKWRVENQENVSNLVIDDTELKQVAYIFKCVNST 1153
SASKP PKPV KKEPALLELEGKKWRVENQENVSNL+I+DTELKQVAYIFKCVNST
Sbjct: 301 SASKP---DPPKPVAKKEPALLELEGKKWRVENQENVSNLMIEDTELKQVAYIFKCVNST 357
Query: 1154 LQIKGKINSITVDNCKKLGLVFDDVVGIVEIINSRDVKVQVMGKVPTISINKTDGCHIYL 1333
LQIKGKINSITVDNCKKLGLVFDDVVGIVEIINS+DVKVQVMGKVPTISINKTDGCH+YL
Sbjct: 358 LQIKGKINSITVDNCKKLGLVFDDVVGIVEIINSKDVKVQVMGKVPTISINKTDGCHVYL 417
Query: 1334 SKNSLDCEIVSAKSSEMNVLIPTEGGDFNEFPVPEQFQTIWNGQKLVTTVTEIAG 1498
SKNSLDCEIVSAKSSEMNVLIPTEGGDFNEFPVPEQF+T+WNGQKLVTTVTEIAG
Sbjct: 418 SKNSLDCEIVSAKSSEMNVLIPTEGGDFNEFPVPEQFKTLWNGQKLVTTVTEIAG 472
>ref|XP_002691825.1| PREDICTED: CAP1 protein-like [Bos taurus].
Length = 471
Score = 756 bits (1951), Expect = 0.0
Identities = 396/476 (83%), Positives = 408/476 (85%), Gaps = 1/476 (0%)
Frame = +2
Query: 74 MADMQNLVERLERAVGRLEAVSHASDTHCGYGDSAAKAGAAPYVQAFDSLLAGPVAEYLK 253
MADM+NLVERLER VGRLEAVSHASDTHCGYGDSAAK G PYVQAFDSLLAGPVAEYLK
Sbjct: 1 MADMRNLVERLERVVGRLEAVSHASDTHCGYGDSAAK-GTTPYVQAFDSLLAGPVAEYLK 59
Query: 254 ISKEIGGDVQKHAEMVHTGLKLEQALLVTASQCQQPVGNKLSELLAPISEQIQEVITFRE 433
ISKE GGDVQKHAEMVHTGLKLE+ALLVTASQCQQP GNKLS+LLAPISEQIQEV+TFRE
Sbjct: 60 ISKESGGDVQKHAEMVHTGLKLERALLVTASQCQQPAGNKLSDLLAPISEQIQEVVTFRE 119
Query: 434 KNRGSKLFNHLSAVSESIQALGWVAMAPKPGPYVKEMNDAAMFYTNRVLKEYXXXXXXXX 613
KNRGSKLFNHLSAVSESIQALGWVAMAPKPG YVKEMNDAAMFYTNRVLKEY
Sbjct: 120 KNRGSKLFNHLSAVSESIQALGWVAMAPKPGLYVKEMNDAAMFYTNRVLKEYKDVDKKHV 179
Query: 614 XXXXAYLSIWTELQAYIKEFHTTGLAWSKTGPVAKELXXXXXXXXXXXXXXXXXXXXXXX 793
AYLSIWTELQAYIKEFHTTGLAWS+TGPVAKEL
Sbjct: 180 DWVKAYLSIWTELQAYIKEFHTTGLAWSRTGPVAKELSGLPSGPSAGSGPPPPPRQVHLP 239
Query: 794 XXXXXXXXXXXXXXX-ALFAQINQGESITHALKHVSDDMKTHKNPALKAQSGPVRTGPKP 970
ALFAQINQGESI HALKHVSDDMKTHKNPALKAQSG +R+GPKP
Sbjct: 240 PPVPTSSGSDDSASRSALFAQINQGESIIHALKHVSDDMKTHKNPALKAQSGLIRSGPKP 299
Query: 971 FSASKPGISPSPKPVTKKEPALLELEGKKWRVENQENVSNLVIDDTELKQVAYIFKCVNS 1150
FSASKP PKPVTKKEPALLELEGKKWRVENQENVSNLVI+DTELKQVAYIFKCVNS
Sbjct: 300 FSASKPD---PPKPVTKKEPALLELEGKKWRVENQENVSNLVIEDTELKQVAYIFKCVNS 356
Query: 1151 TLQIKGKINSITVDNCKKLGLVFDDVVGIVEIINSRDVKVQVMGKVPTISINKTDGCHIY 1330
TLQIKGKINSITVDNCKKLGLVFDDVVGIVEIINS+DV VQVMGKVPTISINKTDGCH+Y
Sbjct: 357 TLQIKGKINSITVDNCKKLGLVFDDVVGIVEIINSKDVTVQVMGKVPTISINKTDGCHVY 416
Query: 1331 LSKNSLDCEIVSAKSSEMNVLIPTEGGDFNEFPVPEQFQTIWNGQKLVTTVTEIAG 1498
LSKNSLDCEIVSAKSSEMNV IPTEGGDFNEFPV EQF+T+WNGQKLVTTVTEIAG
Sbjct: 417 LSKNSLDCEIVSAKSSEMNV-IPTEGGDFNEFPVAEQFKTLWNGQKLVTTVTEIAG 471
>ref|XP_600414.2| PREDICTED: CAP1 protein-like isoform 2 [Bos taurus].
Length = 471
Score = 756 bits (1951), Expect = 0.0
Identities = 396/476 (83%), Positives = 408/476 (85%), Gaps = 1/476 (0%)
Frame = +2
Query: 74 MADMQNLVERLERAVGRLEAVSHASDTHCGYGDSAAKAGAAPYVQAFDSLLAGPVAEYLK 253
MADM+NLVERLER VGRLEAVSHASDTHCGYGDSAAK G PYVQAFDSLLAGPVAEYLK
Sbjct: 1 MADMRNLVERLERVVGRLEAVSHASDTHCGYGDSAAK-GTTPYVQAFDSLLAGPVAEYLK 59
Query: 254 ISKEIGGDVQKHAEMVHTGLKLEQALLVTASQCQQPVGNKLSELLAPISEQIQEVITFRE 433
ISKE GGDVQKHAEMVHTGLKLE+ALLVTASQCQQP GNKLS+LLAPISEQIQEV+TFRE
Sbjct: 60 ISKESGGDVQKHAEMVHTGLKLERALLVTASQCQQPAGNKLSDLLAPISEQIQEVVTFRE 119
Query: 434 KNRGSKLFNHLSAVSESIQALGWVAMAPKPGPYVKEMNDAAMFYTNRVLKEYXXXXXXXX 613
KNRGSKLFNHLSAVSESIQALGWVAMAPKPG YVKEMNDAAMFYTNRVLKEY
Sbjct: 120 KNRGSKLFNHLSAVSESIQALGWVAMAPKPGLYVKEMNDAAMFYTNRVLKEYKDVDKKHV 179
Query: 614 XXXXAYLSIWTELQAYIKEFHTTGLAWSKTGPVAKELXXXXXXXXXXXXXXXXXXXXXXX 793
AYLSIWTELQAYIKEFHTTGLAWS+TGPVAKEL
Sbjct: 180 DWVKAYLSIWTELQAYIKEFHTTGLAWSRTGPVAKELSGLPSGPSAGSGPPPPPRQVHLP 239
Query: 794 XXXXXXXXXXXXXXX-ALFAQINQGESITHALKHVSDDMKTHKNPALKAQSGPVRTGPKP 970
ALFAQINQGESI HALKHVSDDMKTHKNPALKAQSG +R+GPKP
Sbjct: 240 PPVPTSSGSDDSASRSALFAQINQGESIIHALKHVSDDMKTHKNPALKAQSGLIRSGPKP 299
Query: 971 FSASKPGISPSPKPVTKKEPALLELEGKKWRVENQENVSNLVIDDTELKQVAYIFKCVNS 1150
FSASKP PKPVTKKEPALLELEGKKWRVENQENVSNLVI+DTELKQVAYIFKCVNS
Sbjct: 300 FSASKPD---PPKPVTKKEPALLELEGKKWRVENQENVSNLVIEDTELKQVAYIFKCVNS 356
Query: 1151 TLQIKGKINSITVDNCKKLGLVFDDVVGIVEIINSRDVKVQVMGKVPTISINKTDGCHIY 1330
TLQIKGKINSITVDNCKKLGLVFDDVVGIVEIINS+DV VQVMGKVPTISINKTDGCH+Y
Sbjct: 357 TLQIKGKINSITVDNCKKLGLVFDDVVGIVEIINSKDVTVQVMGKVPTISINKTDGCHVY 416
Query: 1331 LSKNSLDCEIVSAKSSEMNVLIPTEGGDFNEFPVPEQFQTIWNGQKLVTTVTEIAG 1498
LSKNSLDCEIVSAKSSEMNV IPTEGGDFNEFPV EQF+T+WNGQKLVTTVTEIAG
Sbjct: 417 LSKNSLDCEIVSAKSSEMNV-IPTEGGDFNEFPVAEQFKTLWNGQKLVTTVTEIAG 471
>ref|NP_001092449.1| adenylyl cyclase-associated protein 2 [Bos taurus].
Length = 486
Score = 525 bits (1351), Expect = e-149
Identities = 279/480 (58%), Positives = 337/480 (70%), Gaps = 7/480 (1%)
Frame = +2
Query: 74 MADMQNLVERLERAVGRLE---AVSHASDTHCGYGDSAAKAGAAPYVQAFDSLLAGPVAE 244
MA+MQ L+ERLERAVGRLE A SH CG + G AP V+AFD L+ VAE
Sbjct: 1 MAEMQGLMERLERAVGRLELLSAGSHRPPGDCGE-INGVNGGVAPSVEAFDKLMNSMVAE 59
Query: 245 YLKISKEIGGDVQKHAEMVHTGLKLEQALLVTASQCQQPVGNKLSELLAPISEQIQEVIT 424
+LK S+ + GDV+ HAEMVH+ + ++A L+ ASQ QQP N ++ LL PISE+IQE+ T
Sbjct: 60 FLKKSRILAGDVETHAEMVHSAFQAQRAFLLMASQYQQPQENDVAALLKPISEKIQEIQT 119
Query: 425 FREKNRGSKLFNHLSAVSESIQALGWVAMAPKPGPYVKEMNDAAMFYTNRVLKEYXXXXX 604
FRE+NRGS +FNHLSAVSESI ALGW+A++PKPGPYVKEMNDAA FYTNRVLK+Y
Sbjct: 120 FRERNRGSTMFNHLSAVSESIPALGWIAVSPKPGPYVKEMNDAATFYTNRVLKDYKHSDL 179
Query: 605 XXXXXXXAYLSIWTELQAYIKEFHTTGLAWSKTGPVAKELXXXXXXXXXXXXXXXXXXXX 784
+YL+IW+ELQAYIKE HTTGL WSKTGPVA
Sbjct: 180 RHVDWVKSYLNIWSELQAYIKEHHTTGLTWSKTGPVASTASALSVLSLGPGLPPPPPPPP 239
Query: 785 XXXXXXXXXXXXXXXXXX----ALFAQINQGESITHALKHVSDDMKTHKNPALKAQSGPV 952
ALFAQ+NQGE+IT L+HV+DD KT+KNP L+A G
Sbjct: 240 PPGPPLLFESEGIKEPSSPSRSALFAQLNQGEAITKGLRHVTDDQKTYKNPNLRAHGGQ- 298
Query: 953 RTGPKPFSASKPGISPSPKPVTKKEPALLELEGKKWRVENQENVSNLVIDDTELKQVAYI 1132
P P + PG +KK +LELEGKKWRVE QE+ ++LVI +T L+QVAYI
Sbjct: 299 --SPSPTKSHTPGPKSPQSHPSKKHTPVLELEGKKWRVEYQEDRNDLVISETALRQVAYI 356
Query: 1133 FKCVNSTLQIKGKINSITVDNCKKLGLVFDDVVGIVEIINSRDVKVQVMGKVPTISINKT 1312
FKC STLQIKGKINSI +DNCKK GLVFD+VVGIVE+INS+D+++QVMGKVPTISINKT
Sbjct: 357 FKCGKSTLQIKGKINSIIIDNCKKFGLVFDNVVGIVEVINSKDIQMQVMGKVPTISINKT 416
Query: 1313 DGCHIYLSKNSLDCEIVSAKSSEMNVLIPTEGGDFNEFPVPEQFQTIWNGQKLVTTVTEI 1492
+GCHIYLS+++LDCEIVSAKSSEMN+LIP + GD+ EFPVPEQF+T W+G KL+T TEI
Sbjct: 417 EGCHIYLSEDALDCEIVSAKSSEMNILIP-QDGDYREFPVPEQFKTAWDGAKLITEPTEI 475
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 61,037,338
Number of extensions: 1613224
Number of successful extensions: 5824
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 5733
Number of HSP's successfully gapped: 7
Length of query: 539
Length of database: 17,681,374
Length adjustment: 107
Effective length of query: 432
Effective length of database: 14,140,958
Effective search space: 6108893856
Effective search space used: 6108893856
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007218
(1618 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_848565.1| PREDICTED: similar to Adenylyl cyclase-associat... 797 0.0
Alignment gi|XP_532545.2| PREDICTED: similar to Adenylyl cyclase-associat... 783 0.0
Alignment gi|XP_856632.1| PREDICTED: similar to Adenylyl cyclase-associat... 776 0.0
Alignment gi|XP_535897.2| PREDICTED: similar to adenylyl cyclase-associat... 533 e-151
Alignment gi|XP_858447.1| PREDICTED: similar to adenylyl cyclase-associat... 495 e-140
Alignment gi|XP_856592.1| PREDICTED: similar to CAP, adenylate cyclase-as... 461 e-130
Alignment gi|XP_856556.1| PREDICTED: similar to CAP, adenylate cyclase-as... 426 e-119
Alignment gi|XP_856509.1| PREDICTED: similar to CAP, adenylate cyclase-as... 399 e-111
Alignment gi|XP_856469.1| PREDICTED: similar to CAP, adenylate cyclase-as... 384 e-106
Alignment gi|XP_858406.1| PREDICTED: similar to adenylyl cyclase-associat... 62 2e-09
>ref|XP_848565.1| PREDICTED: similar to Adenylyl cyclase-associated protein 1 (CAP 1)
isoform 2 [Canis familiaris].
Length = 475
Score = 797 bits (2059), Expect = 0.0
Identities = 405/475 (85%), Positives = 418/475 (88%)
Frame = +2
Query: 74 MADMQNLVERLERAVGRLEAVSHASDTHCGYGDSAAKAGAAPYVQAFDSLLAGPVAEYLK 253
MADMQ LVERLERAVGRLEAVSHASD HCGYGDSA KAGAAPYVQAFDSLLAGPVAEYLK
Sbjct: 1 MADMQKLVERLERAVGRLEAVSHASDMHCGYGDSAPKAGAAPYVQAFDSLLAGPVAEYLK 60
Query: 254 ISKEIGGDVQKHAEMVHTGLKLEQALLVTASQCQQPVGNKLSELLAPISEQIQEVITFRE 433
ISKEIGGDVQKHAEMVHTGLKLE+ALLVTASQCQQP GNKLS+LLAPISEQIQEVIT+RE
Sbjct: 61 ISKEIGGDVQKHAEMVHTGLKLERALLVTASQCQQPAGNKLSDLLAPISEQIQEVITYRE 120
Query: 434 KNRGSKLFNHLSAVSESIQALGWVAMAPKPGPYVKEMNDAAMFYTNRVLKEYXXXXXXXX 613
KNRGSKLFNHLSAVSESIQALGWVAMAPKPGPYVKEMNDAAMFYTNRVLKEY
Sbjct: 121 KNRGSKLFNHLSAVSESIQALGWVAMAPKPGPYVKEMNDAAMFYTNRVLKEYKDVDKKHV 180
Query: 614 XXXXAYLSIWTELQAYIKEFHTTGLAWSKTGPVAKELXXXXXXXXXXXXXXXXXXXXXXX 793
AYLSIWTELQAYIKEFHTTGLAWSKTGPVA+EL
Sbjct: 181 DWVKAYLSIWTELQAYIKEFHTTGLAWSKTGPVAQELSGLPSGPSAGSGPPPPPPGPPPP 240
Query: 794 XXXXXXXXXXXXXXXALFAQINQGESITHALKHVSDDMKTHKNPALKAQSGPVRTGPKPF 973
ALFAQINQGESITHALKHVSDDMKTHKNPALKAQSGPVR+GPKPF
Sbjct: 241 PVPTSSGSDESASRSALFAQINQGESITHALKHVSDDMKTHKNPALKAQSGPVRSGPKPF 300
Query: 974 SASKPGISPSPKPVTKKEPALLELEGKKWRVENQENVSNLVIDDTELKQVAYIFKCVNST 1153
SA KPG+SPSPKP KKEPA+LELEGKKWRVENQENVSNLVIDDTELKQVAYI+KCVN+T
Sbjct: 301 SAPKPGVSPSPKPTAKKEPAVLELEGKKWRVENQENVSNLVIDDTELKQVAYIYKCVNTT 360
Query: 1154 LQIKGKINSITVDNCKKLGLVFDDVVGIVEIINSRDVKVQVMGKVPTISINKTDGCHIYL 1333
LQIKGKINSITVDNCKKLGLVFDDVVGIVEIINSRDVKVQVMGKVPTISINKTDGCH+YL
Sbjct: 361 LQIKGKINSITVDNCKKLGLVFDDVVGIVEIINSRDVKVQVMGKVPTISINKTDGCHVYL 420
Query: 1334 SKNSLDCEIVSAKSSEMNVLIPTEGGDFNEFPVPEQFQTIWNGQKLVTTVTEIAG 1498
SKNSLDCEIVSAKSSEMNVLIPTEGGD+NEFPVPEQF+T+WNGQKLVTTVTEIAG
Sbjct: 421 SKNSLDCEIVSAKSSEMNVLIPTEGGDYNEFPVPEQFKTLWNGQKLVTTVTEIAG 475
>ref|XP_532545.2| PREDICTED: similar to Adenylyl cyclase-associated protein 1 (CAP 1)
isoform 1 [Canis familiaris].
Length = 501
Score = 783 bits (2022), Expect = 0.0
Identities = 405/501 (80%), Positives = 418/501 (83%), Gaps = 26/501 (5%)
Frame = +2
Query: 74 MADMQNLVERLERAVGRLEAVSHASDTHCGYGDSAAKAGAAPYVQAFDSLLAGPVAEYLK 253
MADMQ LVERLERAVGRLEAVSHASD HCGYGDSA KAGAAPYVQAFDSLLAGPVAEYLK
Sbjct: 1 MADMQKLVERLERAVGRLEAVSHASDMHCGYGDSAPKAGAAPYVQAFDSLLAGPVAEYLK 60
Query: 254 ISKEIGGDVQKHAEMVHTGLKLEQALLVTASQCQQPVGNKLSELLAPISEQIQEVITFRE 433
ISKEIGGDVQKHAEMVHTGLKLE+ALLVTASQCQQP GNKLS+LLAPISEQIQEVIT+RE
Sbjct: 61 ISKEIGGDVQKHAEMVHTGLKLERALLVTASQCQQPAGNKLSDLLAPISEQIQEVITYRE 120
Query: 434 KNRGSKLFNHLSAVSESIQALGWVAMAPKPGPYVKEMNDAAMFYTNRVLKEYXXXXXXXX 613
KNRGSKLFNHLSAVSESIQALGWVAMAPKPGPYVKEMNDAAMFYTNRVLKEY
Sbjct: 121 KNRGSKLFNHLSAVSESIQALGWVAMAPKPGPYVKEMNDAAMFYTNRVLKEYKDVDKKHV 180
Query: 614 XXXXAYLSIWTELQAYIKEFHTTGLAWSKTGPVAKELXXXXXXXXXXXXXXXXXXXXXXX 793
AYLSIWTELQAYIKEFHTTGLAWSKTGPVA+EL
Sbjct: 181 DWVKAYLSIWTELQAYIKEFHTTGLAWSKTGPVAQELSGLPSGPSAGSGPPPPPPGPPPP 240
Query: 794 XXXXXXXXXXXXXXXALFAQINQGESITH--------------------------ALKHV 895
ALFAQINQGESITH ALKHV
Sbjct: 241 PVPTSSGSDESASRSALFAQINQGESITHGKPDGLNQNPGIRGMKERHKVAVVPTALKHV 300
Query: 896 SDDMKTHKNPALKAQSGPVRTGPKPFSASKPGISPSPKPVTKKEPALLELEGKKWRVENQ 1075
SDDMKTHKNPALKAQSGPVR+GPKPFSA KPG+SPSPKP KKEPA+LELEGKKWRVENQ
Sbjct: 301 SDDMKTHKNPALKAQSGPVRSGPKPFSAPKPGVSPSPKPTAKKEPAVLELEGKKWRVENQ 360
Query: 1076 ENVSNLVIDDTELKQVAYIFKCVNSTLQIKGKINSITVDNCKKLGLVFDDVVGIVEIINS 1255
ENVSNLVIDDTELKQVAYI+KCVN+TLQIKGKINSITVDNCKKLGLVFDDVVGIVEIINS
Sbjct: 361 ENVSNLVIDDTELKQVAYIYKCVNTTLQIKGKINSITVDNCKKLGLVFDDVVGIVEIINS 420
Query: 1256 RDVKVQVMGKVPTISINKTDGCHIYLSKNSLDCEIVSAKSSEMNVLIPTEGGDFNEFPVP 1435
RDVKVQVMGKVPTISINKTDGCH+YLSKNSLDCEIVSAKSSEMNVLIPTEGGD+NEFPVP
Sbjct: 421 RDVKVQVMGKVPTISINKTDGCHVYLSKNSLDCEIVSAKSSEMNVLIPTEGGDYNEFPVP 480
Query: 1436 EQFQTIWNGQKLVTTVTEIAG 1498
EQF+T+WNGQKLVTTVTEIAG
Sbjct: 481 EQFKTLWNGQKLVTTVTEIAG 501
>ref|XP_856632.1| PREDICTED: similar to Adenylyl cyclase-associated protein 1 (CAP 1)
isoform 7 [Canis familiaris].
Length = 490
Score = 776 bits (2003), Expect = 0.0
Identities = 402/492 (81%), Positives = 416/492 (84%), Gaps = 17/492 (3%)
Frame = +2
Query: 74 MADMQNLVERLERAVGRLEAVSHASDTHCGYGDSAAKAGAAPYVQAFDSLLAGPVAEYLK 253
MADMQ LVERLERAVGRLEAVSHASD HCGYGDSA KAGAAPYVQAFDSLLAGPVAEYLK
Sbjct: 1 MADMQKLVERLERAVGRLEAVSHASDMHCGYGDSAPKAGAAPYVQAFDSLLAGPVAEYLK 60
Query: 254 ISKEIGGDVQKHAEMVHTGLKLEQALLVTASQCQQPVGNKLSELLAPISEQIQEVITFRE 433
ISKEIGGDVQKHAEMVHTGLKLE+ALLVTASQCQQP GNKLS+LLAPISEQIQEVIT+RE
Sbjct: 61 ISKEIGGDVQKHAEMVHTGLKLERALLVTASQCQQPAGNKLSDLLAPISEQIQEVITYRE 120
Query: 434 KNRGSKLFNHLSAVSESIQALGWVAMAPKPGPYVKEMNDAAMFYTNRVLKEYXXXXXXXX 613
KNRGSKLFNHLSAVSESIQALGWVAMAPKPGPYVKEMNDAAMFYTNRVLKEY
Sbjct: 121 KNRGSKLFNHLSAVSESIQALGWVAMAPKPGPYVKEMNDAAMFYTNRVLKEYKDVDKKHV 180
Query: 614 XXXXAYLSIWTELQAYIKEFHTTGLAWSKTGPVAK-----------------ELXXXXXX 742
AYLSIWTELQAYIKEFHTTGLAWSKT V+K +L
Sbjct: 181 DWVKAYLSIWTELQAYIKEFHTTGLAWSKT--VSKSFLPLSVPPRQEDGCYLQLSGLPSG 238
Query: 743 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALFAQINQGESITHALKHVSDDMKTHKN 922
ALFAQINQGESITHALKHVSDDMKTHKN
Sbjct: 239 PSAGSGPPPPPPGPPPPPVPTSSGSDESASRSALFAQINQGESITHALKHVSDDMKTHKN 298
Query: 923 PALKAQSGPVRTGPKPFSASKPGISPSPKPVTKKEPALLELEGKKWRVENQENVSNLVID 1102
PALKAQSGPVR+GPKPFSA KPG+SPSPKP KKEPA+LELEGKKWRVENQENVSNLVID
Sbjct: 299 PALKAQSGPVRSGPKPFSAPKPGVSPSPKPTAKKEPAVLELEGKKWRVENQENVSNLVID 358
Query: 1103 DTELKQVAYIFKCVNSTLQIKGKINSITVDNCKKLGLVFDDVVGIVEIINSRDVKVQVMG 1282
DTELKQVAYI+KCVN+TLQIKGKINSITVDNCKKLGLVFDDVVGIVEIINSRDVKVQVMG
Sbjct: 359 DTELKQVAYIYKCVNTTLQIKGKINSITVDNCKKLGLVFDDVVGIVEIINSRDVKVQVMG 418
Query: 1283 KVPTISINKTDGCHIYLSKNSLDCEIVSAKSSEMNVLIPTEGGDFNEFPVPEQFQTIWNG 1462
KVPTISINKTDGCH+YLSKNSLDCEIVSAKSSEMNVLIPTEGGD+NEFPVPEQF+T+WNG
Sbjct: 419 KVPTISINKTDGCHVYLSKNSLDCEIVSAKSSEMNVLIPTEGGDYNEFPVPEQFKTLWNG 478
Query: 1463 QKLVTTVTEIAG 1498
QKLVTTVTEIAG
Sbjct: 479 QKLVTTVTEIAG 490
>ref|XP_535897.2| PREDICTED: similar to adenylyl cyclase-associated protein 2 isoform 1
[Canis familiaris].
Length = 477
Score = 533 bits (1372), Expect = e-151
Identities = 285/484 (58%), Positives = 344/484 (71%), Gaps = 9/484 (1%)
Frame = +2
Query: 74 MADMQNLVERLERAVGRLEAVSHASDTHCGYGD----SAAKAGAAPYVQAFDSLLAGPVA 241
MA+MQ L+ERLER VGRLE +S +++H GD + G AP V+AFD L+ VA
Sbjct: 1 MAEMQGLMERLERVVGRLEVLS--AESHRPPGDFGEINGVNGGVAPSVEAFDKLMNSMVA 58
Query: 242 EYLKISKEIGGDVQKHAEMVHTGLKLEQALLVTASQCQQPVGNKLSELLAPISEQIQEVI 421
E+LK S+ + GDV+ HAEMVH+ + ++A L+ ASQ QQP N ++ LL PISE+IQE+
Sbjct: 59 EFLKKSRILAGDVETHAEMVHSAFQAQRAFLLMASQHQQPQENDVAALLKPISEKIQEIQ 118
Query: 422 TFREKNRGSKLFNHLSAVSESIQALGWVAMAPKPGPYVKEMNDAAMFYTNRVLKEYXXXX 601
TFRE+NRGSK+FNHLSAVSESI ALGW+A++PKPGPYVKEMNDAA FYTNRVLK+Y
Sbjct: 119 TFRERNRGSKMFNHLSAVSESIPALGWIAVSPKPGPYVKEMNDAATFYTNRVLKDYKHSD 178
Query: 602 XXXXXXXXAYLSIWTELQAYIKEFHTTGLAWSKTGPVAKELXXXXXXXXXXXXXXXXXXX 781
+YL+IW+ELQAYIKE HTTGL WSKTGPVA
Sbjct: 179 LRHVDWVKSYLNIWSELQAYIKEHHTTGLTWSKTGPVASTASALSVLSPGPGLPPPPPPP 238
Query: 782 XXXXXXXXXXXXXXXXXXX----ALFAQINQGESITHALKHVSDDMKTHKNPALKAQSGP 949
ALFAQ+NQGE IT L+HV+DD KTHKNP+L+A G
Sbjct: 239 PPPGPPPFFENEGRREESSPSRSALFAQLNQGEEITKGLRHVTDDQKTHKNPSLRAPGGQ 298
Query: 950 VRTGPKPFSASKPGI-SPSPKPVTKKEPALLELEGKKWRVENQENVSNLVIDDTELKQVA 1126
P P + PG +P P K P +LELEGKKWRVE QE ++LVI +TELKQVA
Sbjct: 299 T---PSPTKSHTPGSRAPQSHPPQKHAP-VLELEGKKWRVEYQEGRNDLVIAETELKQVA 354
Query: 1127 YIFKCVNSTLQIKGKINSITVDNCKKLGLVFDDVVGIVEIINSRDVKVQVMGKVPTISIN 1306
YIFKC STLQ+KGKINSIT+DNCKK GLVFD+VVGIVE+INS+D+++QVMGKVPTISIN
Sbjct: 355 YIFKCNKSTLQMKGKINSITIDNCKKFGLVFDNVVGIVEVINSKDIQMQVMGKVPTISIN 414
Query: 1307 KTDGCHIYLSKNSLDCEIVSAKSSEMNVLIPTEGGDFNEFPVPEQFQTIWNGQKLVTTVT 1486
KT+GCHIYLS+++LDCEIVSAKSSEMNVLIP + GD+ EFPVPEQF+T+W+G KLVT
Sbjct: 415 KTEGCHIYLSEDALDCEIVSAKSSEMNVLIP-QDGDYREFPVPEQFKTVWDGSKLVTEPA 473
Query: 1487 EIAG 1498
EI G
Sbjct: 474 EIMG 477
>ref|XP_858447.1| PREDICTED: similar to adenylyl cyclase-associated protein 2 isoform 3
[Canis familiaris].
Length = 460
Score = 495 bits (1274), Expect = e-140
Identities = 266/454 (58%), Positives = 321/454 (70%), Gaps = 9/454 (1%)
Frame = +2
Query: 74 MADMQNLVERLERAVGRLEAVSHASDTHCGYGD----SAAKAGAAPYVQAFDSLLAGPVA 241
MA+MQ L+ERLER VGRLE +S +++H GD + G AP V+AFD L+ VA
Sbjct: 1 MAEMQGLMERLERVVGRLEVLS--AESHRPPGDFGEINGVNGGVAPSVEAFDKLMNSMVA 58
Query: 242 EYLKISKEIGGDVQKHAEMVHTGLKLEQALLVTASQCQQPVGNKLSELLAPISEQIQEVI 421
E+LK S+ + GDV+ HAEMVH+ + ++A L+ ASQ QQP N ++ LL PISE+IQE+
Sbjct: 59 EFLKKSRILAGDVETHAEMVHSAFQAQRAFLLMASQHQQPQENDVAALLKPISEKIQEIQ 118
Query: 422 TFREKNRGSKLFNHLSAVSESIQALGWVAMAPKPGPYVKEMNDAAMFYTNRVLKEYXXXX 601
TFRE+NRGSK+FNHLSAVSESI ALGW+A++PKPGPYVKEMNDAA FYTNRVLK+Y
Sbjct: 119 TFRERNRGSKMFNHLSAVSESIPALGWIAVSPKPGPYVKEMNDAATFYTNRVLKDYKHSD 178
Query: 602 XXXXXXXXAYLSIWTELQAYIKEFHTTGLAWSKTGPVAKELXXXXXXXXXXXXXXXXXXX 781
+YL+IW+ELQAYIKE HTTGL WSKTGPVA
Sbjct: 179 LRHVDWVKSYLNIWSELQAYIKEHHTTGLTWSKTGPVASTASALSVLSPGPGLPPPPPPP 238
Query: 782 XXXXXXXXXXXXXXXXXXX----ALFAQINQGESITHALKHVSDDMKTHKNPALKAQSGP 949
ALFAQ+NQGE IT L+HV+DD KTHKNP+L+A G
Sbjct: 239 PPPGPPPFFENEGRREESSPSRSALFAQLNQGEEITKGLRHVTDDQKTHKNPSLRAPGGQ 298
Query: 950 VRTGPKPFSASKPGI-SPSPKPVTKKEPALLELEGKKWRVENQENVSNLVIDDTELKQVA 1126
P P + PG +P P K P +LELEGKKWRVE QE ++LVI +TELKQVA
Sbjct: 299 T---PSPTKSHTPGSRAPQSHPPQKHAP-VLELEGKKWRVEYQEGRNDLVIAETELKQVA 354
Query: 1127 YIFKCVNSTLQIKGKINSITVDNCKKLGLVFDDVVGIVEIINSRDVKVQVMGKVPTISIN 1306
YIFKC STLQ+KGKINSIT+DNCKK GLVFD+VVGIVE+INS+D+++QVMGKVPTISIN
Sbjct: 355 YIFKCNKSTLQMKGKINSITIDNCKKFGLVFDNVVGIVEVINSKDIQMQVMGKVPTISIN 414
Query: 1307 KTDGCHIYLSKNSLDCEIVSAKSSEMNVLIPTEG 1408
KT+GCHIYLS+++LDCEIVSAKSSEMNVLIP +G
Sbjct: 415 KTEGCHIYLSEDALDCEIVSAKSSEMNVLIPQDG 448
>ref|XP_856592.1| PREDICTED: similar to CAP, adenylate cyclase-associated protein 1
isoform 6 [Canis familiaris].
Length = 326
Score = 461 bits (1186), Expect = e-130
Identities = 232/283 (81%), Positives = 242/283 (85%)
Frame = +2
Query: 650 LQAYIKEFHTTGLAWSKTGPVAKELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 829
LQAYIKEFHTTGLAWSKTGPVA+EL
Sbjct: 44 LQAYIKEFHTTGLAWSKTGPVAQELSGLPSGPSAGSGPPPPPPGPPPPPVPTSSGSDESA 103
Query: 830 XXXALFAQINQGESITHALKHVSDDMKTHKNPALKAQSGPVRTGPKPFSASKPGISPSPK 1009
ALFAQINQGESITHALKHVSDDMKTHKNPALKAQSGPVR+GPKPFSA KPG+SPSPK
Sbjct: 104 SRSALFAQINQGESITHALKHVSDDMKTHKNPALKAQSGPVRSGPKPFSAPKPGVSPSPK 163
Query: 1010 PVTKKEPALLELEGKKWRVENQENVSNLVIDDTELKQVAYIFKCVNSTLQIKGKINSITV 1189
P KKEPA+LELEGKKWRVENQENVSNLVIDDTELKQVAYI+KCVN+TLQIKGKINSITV
Sbjct: 164 PTAKKEPAVLELEGKKWRVENQENVSNLVIDDTELKQVAYIYKCVNTTLQIKGKINSITV 223
Query: 1190 DNCKKLGLVFDDVVGIVEIINSRDVKVQVMGKVPTISINKTDGCHIYLSKNSLDCEIVSA 1369
DNCKKLGLVFDDVVGIVEIINSRDVKVQVMGKVPTISINKTDGCH+YLSKNSLDCEIVSA
Sbjct: 224 DNCKKLGLVFDDVVGIVEIINSRDVKVQVMGKVPTISINKTDGCHVYLSKNSLDCEIVSA 283
Query: 1370 KSSEMNVLIPTEGGDFNEFPVPEQFQTIWNGQKLVTTVTEIAG 1498
KSSEMNVLIPTEGGD+NEFPVPEQF+T+WNGQKLVTTVTEIAG
Sbjct: 284 KSSEMNVLIPTEGGDYNEFPVPEQFKTLWNGQKLVTTVTEIAG 326
Score = 88.2 bits (217), Expect = 2e-17
Identities = 42/47 (89%), Positives = 44/47 (93%)
Frame = +2
Query: 74 MADMQNLVERLERAVGRLEAVSHASDTHCGYGDSAAKAGAAPYVQAF 214
MADMQ LVERLERAVGRLEAVSHASD HCGYGDSA KAGAAPY+QA+
Sbjct: 1 MADMQKLVERLERAVGRLEAVSHASDMHCGYGDSAPKAGAAPYLQAY 47
>ref|XP_856556.1| PREDICTED: similar to CAP, adenylate cyclase-associated protein 1
isoform 5 [Canis familiaris].
Length = 272
Score = 426 bits (1096), Expect = e-119
Identities = 208/220 (94%), Positives = 217/220 (98%)
Frame = +2
Query: 839 ALFAQINQGESITHALKHVSDDMKTHKNPALKAQSGPVRTGPKPFSASKPGISPSPKPVT 1018
ALFAQINQGESITHALKHVSDDMKTHKNPALKAQSGPVR+GPKPFSA KPG+SPSPKP
Sbjct: 53 ALFAQINQGESITHALKHVSDDMKTHKNPALKAQSGPVRSGPKPFSAPKPGVSPSPKPTA 112
Query: 1019 KKEPALLELEGKKWRVENQENVSNLVIDDTELKQVAYIFKCVNSTLQIKGKINSITVDNC 1198
KKEPA+LELEGKKWRVENQENVSNLVIDDTELKQVAYI+KCVN+TLQIKGKINSITVDNC
Sbjct: 113 KKEPAVLELEGKKWRVENQENVSNLVIDDTELKQVAYIYKCVNTTLQIKGKINSITVDNC 172
Query: 1199 KKLGLVFDDVVGIVEIINSRDVKVQVMGKVPTISINKTDGCHIYLSKNSLDCEIVSAKSS 1378
KKLGLVFDDVVGIVEIINSRDVKVQVMGKVPTISINKTDGCH+YLSKNSLDCEIVSAKSS
Sbjct: 173 KKLGLVFDDVVGIVEIINSRDVKVQVMGKVPTISINKTDGCHVYLSKNSLDCEIVSAKSS 232
Query: 1379 EMNVLIPTEGGDFNEFPVPEQFQTIWNGQKLVTTVTEIAG 1498
EMNVLIPTEGGD+NEFPVPEQF+T+WNGQKLVTTVTEIAG
Sbjct: 233 EMNVLIPTEGGDYNEFPVPEQFKTLWNGQKLVTTVTEIAG 272
>ref|XP_856509.1| PREDICTED: similar to CAP, adenylate cyclase-associated protein 1
isoform 4 [Canis familiaris].
Length = 218
Score = 399 bits (1026), Expect = e-111
Identities = 194/206 (94%), Positives = 203/206 (98%)
Frame = +2
Query: 881 ALKHVSDDMKTHKNPALKAQSGPVRTGPKPFSASKPGISPSPKPVTKKEPALLELEGKKW 1060
ALKHVSDDMKTHKNPALKAQSGPVR+GPKPFSA KPG+SPSPKP KKEPA+LELEGKKW
Sbjct: 13 ALKHVSDDMKTHKNPALKAQSGPVRSGPKPFSAPKPGVSPSPKPTAKKEPAVLELEGKKW 72
Query: 1061 RVENQENVSNLVIDDTELKQVAYIFKCVNSTLQIKGKINSITVDNCKKLGLVFDDVVGIV 1240
RVENQENVSNLVIDDTELKQVAYI+KCVN+TLQIKGKINSITVDNCKKLGLVFDDVVGIV
Sbjct: 73 RVENQENVSNLVIDDTELKQVAYIYKCVNTTLQIKGKINSITVDNCKKLGLVFDDVVGIV 132
Query: 1241 EIINSRDVKVQVMGKVPTISINKTDGCHIYLSKNSLDCEIVSAKSSEMNVLIPTEGGDFN 1420
EIINSRDVKVQVMGKVPTISINKTDGCH+YLSKNSLDCEIVSAKSSEMNVLIPTEGGD+N
Sbjct: 133 EIINSRDVKVQVMGKVPTISINKTDGCHVYLSKNSLDCEIVSAKSSEMNVLIPTEGGDYN 192
Query: 1421 EFPVPEQFQTIWNGQKLVTTVTEIAG 1498
EFPVPEQF+T+WNGQKLVTTVTEIAG
Sbjct: 193 EFPVPEQFKTLWNGQKLVTTVTEIAG 218
>ref|XP_856469.1| PREDICTED: similar to CAP, adenylate cyclase-associated protein 1
isoform 3 [Canis familiaris].
Length = 198
Score = 384 bits (985), Expect = e-106
Identities = 186/198 (93%), Positives = 195/198 (98%)
Frame = +2
Query: 905 MKTHKNPALKAQSGPVRTGPKPFSASKPGISPSPKPVTKKEPALLELEGKKWRVENQENV 1084
MKTHKNPALKAQSGPVR+GPKPFSA KPG+SPSPKP KKEPA+LELEGKKWRVENQENV
Sbjct: 1 MKTHKNPALKAQSGPVRSGPKPFSAPKPGVSPSPKPTAKKEPAVLELEGKKWRVENQENV 60
Query: 1085 SNLVIDDTELKQVAYIFKCVNSTLQIKGKINSITVDNCKKLGLVFDDVVGIVEIINSRDV 1264
SNLVIDDTELKQVAYI+KCVN+TLQIKGKINSITVDNCKKLGLVFDDVVGIVEIINSRDV
Sbjct: 61 SNLVIDDTELKQVAYIYKCVNTTLQIKGKINSITVDNCKKLGLVFDDVVGIVEIINSRDV 120
Query: 1265 KVQVMGKVPTISINKTDGCHIYLSKNSLDCEIVSAKSSEMNVLIPTEGGDFNEFPVPEQF 1444
KVQVMGKVPTISINKTDGCH+YLSKNSLDCEIVSAKSSEMNVLIPTEGGD+NEFPVPEQF
Sbjct: 121 KVQVMGKVPTISINKTDGCHVYLSKNSLDCEIVSAKSSEMNVLIPTEGGDYNEFPVPEQF 180
Query: 1445 QTIWNGQKLVTTVTEIAG 1498
+T+WNGQKLVTTVTEIAG
Sbjct: 181 KTLWNGQKLVTTVTEIAG 198
>ref|XP_858406.1| PREDICTED: similar to adenylyl cyclase-associated protein 2 isoform
2 [Canis familiaris].
Length = 82
Score = 61.6 bits (148), Expect = 2e-09
Identities = 35/73 (47%), Positives = 47/73 (64%), Gaps = 4/73 (5%)
Frame = +2
Query: 83 MQNLVERLERAVGRLEAVSHASDTHCGYGD----SAAKAGAAPYVQAFDSLLAGPVAEYL 250
MQ L+ERLER VGRLE +S +++H GD + G AP V+AFD L+ VAE+L
Sbjct: 1 MQGLMERLERVVGRLEVLS--AESHRPPGDFGEINGVNGGVAPSVEAFDKLMNSMVAEFL 58
Query: 251 KISKEIGGDVQKH 289
K S+ + GDV+ H
Sbjct: 59 KKSRILAGDVETH 71
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 63,483,628
Number of extensions: 1648580
Number of successful extensions: 6190
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 6067
Number of HSP's successfully gapped: 14
Length of query: 539
Length of database: 18,874,504
Length adjustment: 108
Effective length of query: 431
Effective length of database: 15,274,216
Effective search space: 6583187096
Effective search space used: 6583187096
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007218
(1618 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001099000.1| adenylyl cyclase-associated protein 1 [Homo ... 779 0.0
Alignment gi|NP_006358.1| adenylyl cyclase-associated protein 1 [Homo sap... 779 0.0
Alignment gi|NP_006357.1| adenylyl cyclase-associated protein 2 [Homo sap... 528 e-150
>ref|NP_001099000.1| adenylyl cyclase-associated protein 1 [Homo sapiens].
Length = 475
Score = 779 bits (2011), Expect = 0.0
Identities = 400/475 (84%), Positives = 412/475 (86%)
Frame = +2
Query: 74 MADMQNLVERLERAVGRLEAVSHASDTHCGYGDSAAKAGAAPYVQAFDSLLAGPVAEYLK 253
MADMQNLVERLERAVGRLEAVSH SD H GY DS +KAGAAPYVQAFDSLLAGPVAEYLK
Sbjct: 1 MADMQNLVERLERAVGRLEAVSHTSDMHRGYADSPSKAGAAPYVQAFDSLLAGPVAEYLK 60
Query: 254 ISKEIGGDVQKHAEMVHTGLKLEQALLVTASQCQQPVGNKLSELLAPISEQIQEVITFRE 433
ISKEIGGDVQKHAEMVHTGLKLE+ALLVTASQCQQP NKLS+LLAPISEQI+EVITFRE
Sbjct: 61 ISKEIGGDVQKHAEMVHTGLKLERALLVTASQCQQPAENKLSDLLAPISEQIKEVITFRE 120
Query: 434 KNRGSKLFNHLSAVSESIQALGWVAMAPKPGPYVKEMNDAAMFYTNRVLKEYXXXXXXXX 613
KNRGSKLFNHLSAVSESIQALGWVAMAPKPGPYVKEMNDAAMFYTNRVLKEY
Sbjct: 121 KNRGSKLFNHLSAVSESIQALGWVAMAPKPGPYVKEMNDAAMFYTNRVLKEYKDVDKKHV 180
Query: 614 XXXXAYLSIWTELQAYIKEFHTTGLAWSKTGPVAKELXXXXXXXXXXXXXXXXXXXXXXX 793
AYLSIWTELQAYIKEFHTTGLAWSKTGPVAKEL
Sbjct: 181 DWVKAYLSIWTELQAYIKEFHTTGLAWSKTGPVAKELSGLPSGPSAGSGPPPPPPGPPPP 240
Query: 794 XXXXXXXXXXXXXXXALFAQINQGESITHALKHVSDDMKTHKNPALKAQSGPVRTGPKPF 973
ALFAQINQGESITHALKHVSDDMKTHKNPALKAQSGPVR+GPKPF
Sbjct: 241 PVSTSSGSDESASRSALFAQINQGESITHALKHVSDDMKTHKNPALKAQSGPVRSGPKPF 300
Query: 974 SASKPGISPSPKPVTKKEPALLELEGKKWRVENQENVSNLVIDDTELKQVAYIFKCVNST 1153
SA KP SPSPK TKKEPA+LELEGKKWRVENQENVSNLVI+DTELKQVAYI+KCVN+T
Sbjct: 301 SAPKPQTSPSPKRATKKEPAVLELEGKKWRVENQENVSNLVIEDTELKQVAYIYKCVNTT 360
Query: 1154 LQIKGKINSITVDNCKKLGLVFDDVVGIVEIINSRDVKVQVMGKVPTISINKTDGCHIYL 1333
LQIKGKINSITVDNCKKLGLVFDDVVGIVEIINS+DVKVQVMGKVPTISINKTDGCH YL
Sbjct: 361 LQIKGKINSITVDNCKKLGLVFDDVVGIVEIINSKDVKVQVMGKVPTISINKTDGCHAYL 420
Query: 1334 SKNSLDCEIVSAKSSEMNVLIPTEGGDFNEFPVPEQFQTIWNGQKLVTTVTEIAG 1498
SKNSLDCEIVSAKSSEMNVLIPTEGGDFNEFPVPEQF+T+WNGQKLVTTVTEIAG
Sbjct: 421 SKNSLDCEIVSAKSSEMNVLIPTEGGDFNEFPVPEQFKTLWNGQKLVTTVTEIAG 475
>ref|NP_006358.1| adenylyl cyclase-associated protein 1 [Homo sapiens].
Length = 475
Score = 779 bits (2011), Expect = 0.0
Identities = 400/475 (84%), Positives = 412/475 (86%)
Frame = +2
Query: 74 MADMQNLVERLERAVGRLEAVSHASDTHCGYGDSAAKAGAAPYVQAFDSLLAGPVAEYLK 253
MADMQNLVERLERAVGRLEAVSH SD H GY DS +KAGAAPYVQAFDSLLAGPVAEYLK
Sbjct: 1 MADMQNLVERLERAVGRLEAVSHTSDMHRGYADSPSKAGAAPYVQAFDSLLAGPVAEYLK 60
Query: 254 ISKEIGGDVQKHAEMVHTGLKLEQALLVTASQCQQPVGNKLSELLAPISEQIQEVITFRE 433
ISKEIGGDVQKHAEMVHTGLKLE+ALLVTASQCQQP NKLS+LLAPISEQI+EVITFRE
Sbjct: 61 ISKEIGGDVQKHAEMVHTGLKLERALLVTASQCQQPAENKLSDLLAPISEQIKEVITFRE 120
Query: 434 KNRGSKLFNHLSAVSESIQALGWVAMAPKPGPYVKEMNDAAMFYTNRVLKEYXXXXXXXX 613
KNRGSKLFNHLSAVSESIQALGWVAMAPKPGPYVKEMNDAAMFYTNRVLKEY
Sbjct: 121 KNRGSKLFNHLSAVSESIQALGWVAMAPKPGPYVKEMNDAAMFYTNRVLKEYKDVDKKHV 180
Query: 614 XXXXAYLSIWTELQAYIKEFHTTGLAWSKTGPVAKELXXXXXXXXXXXXXXXXXXXXXXX 793
AYLSIWTELQAYIKEFHTTGLAWSKTGPVAKEL
Sbjct: 181 DWVKAYLSIWTELQAYIKEFHTTGLAWSKTGPVAKELSGLPSGPSAGSGPPPPPPGPPPP 240
Query: 794 XXXXXXXXXXXXXXXALFAQINQGESITHALKHVSDDMKTHKNPALKAQSGPVRTGPKPF 973
ALFAQINQGESITHALKHVSDDMKTHKNPALKAQSGPVR+GPKPF
Sbjct: 241 PVSTSSGSDESASRSALFAQINQGESITHALKHVSDDMKTHKNPALKAQSGPVRSGPKPF 300
Query: 974 SASKPGISPSPKPVTKKEPALLELEGKKWRVENQENVSNLVIDDTELKQVAYIFKCVNST 1153
SA KP SPSPK TKKEPA+LELEGKKWRVENQENVSNLVI+DTELKQVAYI+KCVN+T
Sbjct: 301 SAPKPQTSPSPKRATKKEPAVLELEGKKWRVENQENVSNLVIEDTELKQVAYIYKCVNTT 360
Query: 1154 LQIKGKINSITVDNCKKLGLVFDDVVGIVEIINSRDVKVQVMGKVPTISINKTDGCHIYL 1333
LQIKGKINSITVDNCKKLGLVFDDVVGIVEIINS+DVKVQVMGKVPTISINKTDGCH YL
Sbjct: 361 LQIKGKINSITVDNCKKLGLVFDDVVGIVEIINSKDVKVQVMGKVPTISINKTDGCHAYL 420
Query: 1334 SKNSLDCEIVSAKSSEMNVLIPTEGGDFNEFPVPEQFQTIWNGQKLVTTVTEIAG 1498
SKNSLDCEIVSAKSSEMNVLIPTEGGDFNEFPVPEQF+T+WNGQKLVTTVTEIAG
Sbjct: 421 SKNSLDCEIVSAKSSEMNVLIPTEGGDFNEFPVPEQFKTLWNGQKLVTTVTEIAG 475
>ref|NP_006357.1| adenylyl cyclase-associated protein 2 [Homo sapiens].
Length = 477
Score = 528 bits (1359), Expect = e-150
Identities = 279/480 (58%), Positives = 345/480 (71%), Gaps = 7/480 (1%)
Frame = +2
Query: 74 MADMQNLVERLERAVGRLEAVS---HASDTHCGYGDSAAKAGAAPYVQAFDSLLAGPVAE 244
MA+MQ LVERLERAV RLE++S H +CG + AG AP V+AFD L+ VAE
Sbjct: 1 MANMQGLVERLERAVSRLESLSAESHRPPGNCGEVNGVI-AGVAPSVEAFDKLMDSMVAE 59
Query: 245 YLKISKEIGGDVQKHAEMVHTGLKLEQALLVTASQCQQPVGNKLSELLAPISEQIQEVIT 424
+LK S+ + GDV+ HAEMVH+ + ++A L+ ASQ QQP N ++ LL PISE+IQE+ T
Sbjct: 60 FLKNSRILAGDVETHAEMVHSAFQAQRAFLLMASQYQQPHENDVAALLKPISEKIQEIQT 119
Query: 425 FREKNRGSKLFNHLSAVSESIQALGWVAMAPKPGPYVKEMNDAAMFYTNRVLKEYXXXXX 604
FRE+NRGS +FNHLSAVSESI ALGW+A++PKPGPYVKEMNDAA FYTNRVLK+Y
Sbjct: 120 FRERNRGSNMFNHLSAVSESIPALGWIAVSPKPGPYVKEMNDAATFYTNRVLKDYKHSDL 179
Query: 605 XXXXXXXAYLSIWTELQAYIKEFHTTGLAWSKTGPVAKELXXXXXXXXXXXXXXXXXXXX 784
+YL+IW+ELQAYIKE HTTGL WSKTGPVA +
Sbjct: 180 RHVDWVKSYLNIWSELQAYIKEHHTTGLTWSKTGPVASTVSAFSVLSSGPGLPPPPPPLP 239
Query: 785 XXXXXXXXXXXXXXXXXX----ALFAQINQGESITHALKHVSDDMKTHKNPALKAQSGPV 952
ALFAQ+NQGE+IT L+HV+DD KT+KNP+L+AQ G
Sbjct: 240 PPGPPPLFENEGKKEESSPSRSALFAQLNQGEAITKGLRHVTDDQKTYKNPSLRAQGGQT 299
Query: 953 RTGPKPFSASKPGISPSPKPVTKKEPALLELEGKKWRVENQENVSNLVIDDTELKQVAYI 1132
++ K + S SP P K P +LELEGKKWRVE QE+ ++LVI +TELKQVAYI
Sbjct: 300 QSPTKSHTPSPT--SPKSYPSQKHAP-VLELEGKKWRVEYQEDRNDLVISETELKQVAYI 356
Query: 1133 FKCVNSTLQIKGKINSITVDNCKKLGLVFDDVVGIVEIINSRDVKVQVMGKVPTISINKT 1312
FKC ST+QIKGK+NSI +DNCKKLGLVFD+VVGIVE+INS+D+++QVMG+VPTISINKT
Sbjct: 357 FKCEKSTIQIKGKVNSIIIDNCKKLGLVFDNVVGIVEVINSQDIQIQVMGRVPTISINKT 416
Query: 1313 DGCHIYLSKNSLDCEIVSAKSSEMNVLIPTEGGDFNEFPVPEQFQTIWNGQKLVTTVTEI 1492
+GCHIYLS+++LDCEIVSAKSSEMN+LIP + GD+ EFP+PEQF+T W+G KL+T EI
Sbjct: 417 EGCHIYLSEDALDCEIVSAKSSEMNILIP-QDGDYREFPIPEQFKTAWDGSKLITEPAEI 475
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 62,598,350
Number of extensions: 1642824
Number of successful extensions: 5790
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 5721
Number of HSP's successfully gapped: 4
Length of query: 539
Length of database: 18,297,164
Length adjustment: 107
Effective length of query: 432
Effective length of database: 14,770,016
Effective search space: 6380646912
Effective search space used: 6380646912
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007218
(1618 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_031624.2| adenylyl cyclase-associated protein 1 [Mus musc... 778 0.0
Alignment gi|NP_080332.1| adenylyl cyclase-associated protein 2 [Mus musc... 511 e-145
>ref|NP_031624.2| adenylyl cyclase-associated protein 1 [Mus musculus].
Length = 474
Score = 778 bits (2008), Expect = 0.0
Identities = 399/475 (84%), Positives = 410/475 (86%)
Frame = +2
Query: 74 MADMQNLVERLERAVGRLEAVSHASDTHCGYGDSAAKAGAAPYVQAFDSLLAGPVAEYLK 253
MADMQNLVERLERAVGRLEAVSH SD HCGYGDS +K GA PYVQAFDSLLA PVAEYLK
Sbjct: 1 MADMQNLVERLERAVGRLEAVSHTSDMHCGYGDSPSK-GAVPYVQAFDSLLANPVAEYLK 59
Query: 254 ISKEIGGDVQKHAEMVHTGLKLEQALLVTASQCQQPVGNKLSELLAPISEQIQEVITFRE 433
+SKEIGGDVQKHAEMVHTGLKLE+ALL TASQCQQP GNKLS+LLAPISEQIQEVITFRE
Sbjct: 60 MSKEIGGDVQKHAEMVHTGLKLERALLATASQCQQPAGNKLSDLLAPISEQIQEVITFRE 119
Query: 434 KNRGSKLFNHLSAVSESIQALGWVAMAPKPGPYVKEMNDAAMFYTNRVLKEYXXXXXXXX 613
KNRGSK FNHLSAVSESIQALGWVA+A KPGP+VKEMNDAAMFYTNRVLKEY
Sbjct: 120 KNRGSKFFNHLSAVSESIQALGWVALAAKPGPFVKEMNDAAMFYTNRVLKEYRDVDKKHV 179
Query: 614 XXXXAYLSIWTELQAYIKEFHTTGLAWSKTGPVAKELXXXXXXXXXXXXXXXXXXXXXXX 793
AYLSIWTELQAYIKEFHTTGLAWSKTGPVAKEL
Sbjct: 180 DWVRAYLSIWTELQAYIKEFHTTGLAWSKTGPVAKELSGLPSGPSVGSGPPPPPPGPPPP 239
Query: 794 XXXXXXXXXXXXXXXALFAQINQGESITHALKHVSDDMKTHKNPALKAQSGPVRTGPKPF 973
ALFAQINQGESITHALKHVSDDMKTHKNPALKAQSGPVR+GPKPF
Sbjct: 240 PISTSSGSDDSASRSALFAQINQGESITHALKHVSDDMKTHKNPALKAQSGPVRSGPKPF 299
Query: 974 SASKPGISPSPKPVTKKEPALLELEGKKWRVENQENVSNLVIDDTELKQVAYIFKCVNST 1153
SA KP SPSPKP TKKEPALLELEGKKWRVENQENVSNLVIDDTELKQVAYI+KCVN+T
Sbjct: 300 SAPKPQTSPSPKPATKKEPALLELEGKKWRVENQENVSNLVIDDTELKQVAYIYKCVNTT 359
Query: 1154 LQIKGKINSITVDNCKKLGLVFDDVVGIVEIINSRDVKVQVMGKVPTISINKTDGCHIYL 1333
LQIKGKINSITVDNCKKLGLVFDDVVGIVEIINSRDVKVQVMGKVPTISINKTDGCH YL
Sbjct: 360 LQIKGKINSITVDNCKKLGLVFDDVVGIVEIINSRDVKVQVMGKVPTISINKTDGCHAYL 419
Query: 1334 SKNSLDCEIVSAKSSEMNVLIPTEGGDFNEFPVPEQFQTIWNGQKLVTTVTEIAG 1498
SKNSLDCEIVSAKSSEMNVLIPTEGGDFNEFPVPEQF+T+WNGQKLVTTVTEIAG
Sbjct: 420 SKNSLDCEIVSAKSSEMNVLIPTEGGDFNEFPVPEQFKTLWNGQKLVTTVTEIAG 474
>ref|NP_080332.1| adenylyl cyclase-associated protein 2 [Mus musculus].
Length = 476
Score = 511 bits (1317), Expect = e-145
Identities = 276/479 (57%), Positives = 338/479 (70%), Gaps = 6/479 (1%)
Frame = +2
Query: 74 MADMQNLVERLERAVGRLEAVSHASD-THCGYGD-SAAKAGAAPYVQAFDSLLAGPVAEY 247
M DM L+ERLERAV RLE +S D G G+ + G AP V+AFD L+ VAE+
Sbjct: 1 MTDMAGLMERLERAVIRLEQLSAGLDGPPRGCGEVNGVNGGVAPSVEAFDKLINSMVAEF 60
Query: 248 LKISKEIGGDVQKHAEMVHTGLKLEQALLVTASQCQQPVGNKLSELLAPISEQIQEVITF 427
LK S+ + GDV+ HAEMVH + ++A L+ SQ QQP N+++ LL PISE+IQE+ TF
Sbjct: 61 LKNSRVLAGDVETHAEMVHGAFQAQRAFLLMVSQYQQPQENEVAVLLKPISEKIQEIQTF 120
Query: 428 REKNRGSKLFNHLSAVSESIQALGWVAMAPKPGPYVKEMNDAAMFYTNRVLKEYXXXXXX 607
RE+NRGS +FNHLSAVSESI ALGW+A++PKPGPYVKEMNDAA FYTNRVLK+Y
Sbjct: 121 RERNRGSNMFNHLSAVSESIAALGWIAVSPKPGPYVKEMNDAATFYTNRVLKDYKHSDLR 180
Query: 608 XXXXXXAYLSIWTELQAYIKEFHTTGLAWSKTGPVAKELXXXXXXXXXXXXXXXXXXXXX 787
+YL+IW+ELQAYI+E HTTGL WSKTGPVA
Sbjct: 181 HVDWVRSYLNIWSELQAYIREHHTTGLTWSKTGPVASTASAFSILSSGPGLPPPPPPPPP 240
Query: 788 XXXXXXXXXXXXXXXXX----ALFAQINQGESITHALKHVSDDMKTHKNPALKAQSGPVR 955
ALFAQ+NQGE+IT L+HV+DD KT+KNP+L+AQ G +R
Sbjct: 241 PGPPPPFENEDKKEEPSPSRSALFAQLNQGEAITKGLRHVTDDKKTYKNPSLRAQ-GQIR 299
Query: 956 TGPKPFSASKPGISPSPKPVTKKEPALLELEGKKWRVENQENVSNLVIDDTELKQVAYIF 1135
+ K + S SP K P +LELEGKKWRVE QE+ ++LVI +TELKQVAYIF
Sbjct: 300 SPTKTHTPSPT--SPKSNSPQKHTP-VLELEGKKWRVEYQEDRNDLVISETELKQVAYIF 356
Query: 1136 KCVNSTLQIKGKINSITVDNCKKLGLVFDDVVGIVEIINSRDVKVQVMGKVPTISINKTD 1315
KC STLQIKGK+NSITVDNCKK GLVFD VVGIVE+INS+D+++QVMG+VPTISINKT+
Sbjct: 357 KCDKSTLQIKGKVNSITVDNCKKFGLVFDHVVGIVEVINSKDIQIQVMGRVPTISINKTE 416
Query: 1316 GCHIYLSKNSLDCEIVSAKSSEMNVLIPTEGGDFNEFPVPEQFQTIWNGQKLVTTVTEI 1492
GCH+YLS+++LDCEIVSAKSSEMNVL+P + D+ EFP+PEQF+TIW+G KLVT EI
Sbjct: 417 GCHLYLSEDALDCEIVSAKSSEMNVLVP-QDDDYREFPIPEQFKTIWDGSKLVTEPAEI 474
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 53,327,492
Number of extensions: 1390175
Number of successful extensions: 4772
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 4725
Number of HSP's successfully gapped: 3
Length of query: 539
Length of database: 15,617,559
Length adjustment: 106
Effective length of query: 433
Effective length of database: 12,433,743
Effective search space: 5383810719
Effective search space used: 5383810719
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007218
(1618 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_003127872.2| PREDICTED: zinc finger protein Rlf-like, par... 630 0.0
Alignment gi|XP_003356378.1| PREDICTED: adenylyl cyclase-associated prote... 439 e-123
Alignment gi|XP_003127870.1| PREDICTED: adenylyl cyclase-associated prote... 331 6e-91
Alignment gi|XP_003361634.1| PREDICTED: adenylyl cyclase-associated prote... 219 3e-57
Alignment gi|XP_003128236.2| PREDICTED: adenylyl cyclase-associated prote... 218 8e-57
>ref|XP_003127872.2| PREDICTED: zinc finger protein Rlf-like, partial [Sus scrofa].
Length = 1526
Score = 630 bits (1626), Expect = 0.0
Identities = 325/376 (86%), Positives = 326/376 (86%)
Frame = +2
Query: 371 KLSELLAPISEQIQEVITFREKNRGSKLFNHLSAVSESIQALGWVAMAPKPGPYVKEMND 550
KLSELLAPISEQIQEVITFREKNRGSKLFNHLSAVSESIQALGWVAMAPKPGPYVKEMND
Sbjct: 1151 KLSELLAPISEQIQEVITFREKNRGSKLFNHLSAVSESIQALGWVAMAPKPGPYVKEMND 1210
Query: 551 AAMFYTNRVLKEYXXXXXXXXXXXXAYLSIWTELQAYIKEFHTTGLAWSKTGPVAKELXX 730
AAMFYTNRVLKEY AYLSIWTELQAYIKEFHTTGLAWSKTGPVAKEL
Sbjct: 1211 AAMFYTNRVLKEYKDVDKKHVDWVKAYLSIWTELQAYIKEFHTTGLAWSKTGPVAKELSG 1270
Query: 731 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALFAQINQGESITHALKHVSDDMK 910
ALFAQINQGESITHALKHVSDDMK
Sbjct: 1271 LPSGPSAGSGPPPPPPGPPPPPVPTSSGSDESASRSALFAQINQGESITHALKHVSDDMK 1330
Query: 911 THKNPALKAQSGPVRTGPKPFSASKPGISPSPKPVTKKEPALLELEGKKWRVENQENVSN 1090
THKNPALKAQSGPVRTGPKPFSASKPGISPSPKPVTKKEPALLELEGKKWRVENQENVSN
Sbjct: 1331 THKNPALKAQSGPVRTGPKPFSASKPGISPSPKPVTKKEPALLELEGKKWRVENQENVSN 1390
Query: 1091 LVIDDTELKQVAYIFKCVNSTLQIKGKINSITVDNCKKLGLVFDDVVGIVEIINSRDVKV 1270
LVIDDTELKQVAYIFKCVNSTLQIKGKINSITVDNCKKLGLVFDDVVGIVEIINSRDVKV
Sbjct: 1391 LVIDDTELKQVAYIFKCVNSTLQIKGKINSITVDNCKKLGLVFDDVVGIVEIINSRDVKV 1450
Query: 1271 QVMGKVPTISINKTDGCHIYLSKNSLDCEIVSAKSSEMNVLIPTEGGDFNEFPVPEQFQT 1450
QVMGKVPTISINKTDGCHIYLSKNSLDCEIVSAKSSEMNVLIPTEGGDFNEFPVPEQF+T
Sbjct: 1451 QVMGKVPTISINKTDGCHIYLSKNSLDCEIVSAKSSEMNVLIPTEGGDFNEFPVPEQFKT 1510
Query: 1451 IWNGQKLVTTVTEIAG 1498
IWNGQKLVTTVTEIAG
Sbjct: 1511 IWNGQKLVTTVTEIAG 1526
>ref|XP_003356378.1| PREDICTED: adenylyl cyclase-associated protein 1-like [Sus scrofa].
Length = 294
Score = 439 bits (1130), Expect = e-123
Identities = 219/220 (99%), Positives = 220/220 (100%)
Frame = +2
Query: 839 ALFAQINQGESITHALKHVSDDMKTHKNPALKAQSGPVRTGPKPFSASKPGISPSPKPVT 1018
ALFAQINQGESITHALKHVSDDMKTHKNPALKAQSGPVRTGPKPFSASKPGISPSPKPVT
Sbjct: 75 ALFAQINQGESITHALKHVSDDMKTHKNPALKAQSGPVRTGPKPFSASKPGISPSPKPVT 134
Query: 1019 KKEPALLELEGKKWRVENQENVSNLVIDDTELKQVAYIFKCVNSTLQIKGKINSITVDNC 1198
KKEPALLELEGKKWRVENQENVSNLVIDDTELKQVAYIFKCVNSTLQIKGKINSITVDNC
Sbjct: 135 KKEPALLELEGKKWRVENQENVSNLVIDDTELKQVAYIFKCVNSTLQIKGKINSITVDNC 194
Query: 1199 KKLGLVFDDVVGIVEIINSRDVKVQVMGKVPTISINKTDGCHIYLSKNSLDCEIVSAKSS 1378
KKLGLVFDDVVGIVEIINSRDVKVQVMGKVPTISINKTDGCHIYLSKNSLDCEIVSAKSS
Sbjct: 195 KKLGLVFDDVVGIVEIINSRDVKVQVMGKVPTISINKTDGCHIYLSKNSLDCEIVSAKSS 254
Query: 1379 EMNVLIPTEGGDFNEFPVPEQFQTIWNGQKLVTTVTEIAG 1498
EMNVLIPTEGGDFNEFPVPEQF+TIWNGQKLVTTVTEIAG
Sbjct: 255 EMNVLIPTEGGDFNEFPVPEQFKTIWNGQKLVTTVTEIAG 294
>ref|XP_003127870.1| PREDICTED: adenylyl cyclase-associated protein 1-like [Sus scrofa].
Length = 173
Score = 331 bits (849), Expect = 6e-91
Identities = 170/172 (98%), Positives = 170/172 (98%)
Frame = +2
Query: 74 MADMQNLVERLERAVGRLEAVSHASDTHCGYGDSAAKAGAAPYVQAFDSLLAGPVAEYLK 253
MADMQNLVERLERAVGRLEAVSHASDTHCGYGDSAAKAGAAPYVQAFDSLLAGPVAEYLK
Sbjct: 1 MADMQNLVERLERAVGRLEAVSHASDTHCGYGDSAAKAGAAPYVQAFDSLLAGPVAEYLK 60
Query: 254 ISKEIGGDVQKHAEMVHTGLKLEQALLVTASQCQQPVGNKLSELLAPISEQIQEVITFRE 433
ISKEIGGDVQKHAEMVHTGLKLEQALLVTASQCQQP NKLSELLAPISEQIQEVITFRE
Sbjct: 61 ISKEIGGDVQKHAEMVHTGLKLEQALLVTASQCQQP--NKLSELLAPISEQIQEVITFRE 118
Query: 434 KNRGSKLFNHLSAVSESIQALGWVAMAPKPGPYVKEMNDAAMFYTNRVLKEY 589
KNRGSKLFNHLSAVSESIQALGWVAMAPKPGPYVKEMNDAAMFYTNRVLKEY
Sbjct: 119 KNRGSKLFNHLSAVSESIQALGWVAMAPKPGPYVKEMNDAAMFYTNRVLKEY 170
>ref|XP_003361634.1| PREDICTED: adenylyl cyclase-associated protein 2-like, partial [Sus
scrofa].
Length = 283
Score = 219 bits (559), Expect = 3e-57
Identities = 108/149 (72%), Positives = 130/149 (87%), Gaps = 1/149 (0%)
Frame = +2
Query: 1049 GKKW-RVENQENVSNLVIDDTELKQVAYIFKCVNSTLQIKGKINSITVDNCKKLGLVFDD 1225
G W + E QE+ ++LVI +TEL+QVAYIFKC STLQIKGKINSI VDNCKK GLVFD+
Sbjct: 125 GLTWSKTEYQEDRNDLVISETELRQVAYIFKCNKSTLQIKGKINSIIVDNCKKFGLVFDN 184
Query: 1226 VVGIVEIINSRDVKVQVMGKVPTISINKTDGCHIYLSKNSLDCEIVSAKSSEMNVLIPTE 1405
VGIVE+INS+D+++QVMGKVPTISINKT+GCHIYLS+++LDC+IVSAKSSEMN+LIP +
Sbjct: 185 AVGIVEVINSKDIQMQVMGKVPTISINKTEGCHIYLSEDALDCDIVSAKSSEMNILIPRD 244
Query: 1406 GGDFNEFPVPEQFQTIWNGQKLVTTVTEI 1492
GD+ EFPVPEQF+T W+G KLVT TEI
Sbjct: 245 -GDYREFPVPEQFKTAWDGSKLVTEPTEI 272
Score = 167 bits (422), Expect = 2e-41
Identities = 82/125 (65%), Positives = 97/125 (77%)
Frame = +2
Query: 329 LLVTASQCQQPVGNKLSELLAPISEQIQEVITFREKNRGSKLFNHLSAVSESIQALGWVA 508
L+ + C Q N ++ LL PISE+IQE+ TFRE+NRGSK+FNHLSAVSESI ALGW+A
Sbjct: 10 LVTVPNVCLQ---NDVAALLKPISEKIQEIQTFRERNRGSKMFNHLSAVSESIPALGWIA 66
Query: 509 MAPKPGPYVKEMNDAAMFYTNRVLKEYXXXXXXXXXXXXAYLSIWTELQAYIKEFHTTGL 688
++PKPGPYVKEMNDAA FYTNRVLK+Y +YL+IW+ELQAYIKE HTTGL
Sbjct: 67 VSPKPGPYVKEMNDAATFYTNRVLKDYKHSDLRHVDWVKSYLNIWSELQAYIKEHHTTGL 126
Query: 689 AWSKT 703
WSKT
Sbjct: 127 TWSKT 131
>ref|XP_003128236.2| PREDICTED: adenylyl cyclase-associated protein 2, partial [Sus
scrofa].
Length = 152
Score = 218 bits (555), Expect = 8e-57
Identities = 106/142 (74%), Positives = 127/142 (89%)
Frame = +2
Query: 1067 ENQENVSNLVIDDTELKQVAYIFKCVNSTLQIKGKINSITVDNCKKLGLVFDDVVGIVEI 1246
E QE+ ++LVI +TEL+QVAYIFKC STLQIKGKINSI VDNCKK GLVFD+ VGIVE+
Sbjct: 1 EYQEDRNDLVISETELRQVAYIFKCNKSTLQIKGKINSIIVDNCKKFGLVFDNAVGIVEV 60
Query: 1247 INSRDVKVQVMGKVPTISINKTDGCHIYLSKNSLDCEIVSAKSSEMNVLIPTEGGDFNEF 1426
INS+D+++QVMGKVPTISINKT+GCHIYLS+++LDC+IVSAKSSEMN+LIP + GD+ EF
Sbjct: 61 INSKDIQMQVMGKVPTISINKTEGCHIYLSEDALDCDIVSAKSSEMNILIPRD-GDYREF 119
Query: 1427 PVPEQFQTIWNGQKLVTTVTEI 1492
PVPEQF+T W+G KLVT TEI
Sbjct: 120 PVPEQFKTAWDGSKLVTEPTEI 141
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 39,247,178
Number of extensions: 1030650
Number of successful extensions: 3550
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 3525
Number of HSP's successfully gapped: 6
Length of query: 539
Length of database: 11,343,932
Length adjustment: 104
Effective length of query: 435
Effective length of database: 8,754,644
Effective search space: 3808270140
Effective search space used: 3808270140
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007218
(1618 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr06 371 e-100
gb|GL894875.2| Sus scrofa unplaced genomic scaffold ChrUScaf2759 64 3e-07
Sscrofa_Chr07 64 3e-07
>Sscrofa_Chr06
|| Length = 157765593
Score = 371 bits (187), Expect = e-100
Identities = 187/187 (100%)
Strand = Plus / Minus
Query: 881 gccctgaaacacgtatccgatgacatgaagactcacaagaaccctgctttgaaggctcag 940
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89125791 gccctgaaacacgtatccgatgacatgaagactcacaagaaccctgctttgaaggctcag 89125732
Query: 941 agtgggcccgtacgaactggccccaaaccattctctgcatctaaacctggaatcagccca 1000
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89125731 agtgggcccgtacgaactggccccaaaccattctctgcatctaaacctggaatcagccca 89125672
Query: 1001 tcccccaaaccagtcacaaagaaggagccagctctacttgaactggagggcaagaagtgg 1060
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89125671 tcccccaaaccagtcacaaagaaggagccagctctacttgaactggagggcaagaagtgg 89125612
Query: 1061 agagtgg 1067
|||||||
Sbjct: 89125611 agagtgg 89125605
Score = 371 bits (187), Expect = e-100
Identities = 187/187 (100%)
Strand = Plus / Minus
Query: 881 gccctgaaacacgtatccgatgacatgaagactcacaagaaccctgctttgaaggctcag 940
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89304025 gccctgaaacacgtatccgatgacatgaagactcacaagaaccctgctttgaaggctcag 89303966
Query: 941 agtgggcccgtacgaactggccccaaaccattctctgcatctaaacctggaatcagccca 1000
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89303965 agtgggcccgtacgaactggccccaaaccattctctgcatctaaacctggaatcagccca 89303906
Query: 1001 tcccccaaaccagtcacaaagaaggagccagctctacttgaactggagggcaagaagtgg 1060
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89303905 tcccccaaaccagtcacaaagaaggagccagctctacttgaactggagggcaagaagtgg 89303846
Query: 1061 agagtgg 1067
|||||||
Sbjct: 89303845 agagtgg 89303839
Score = 291 bits (147), Expect = 6e-76
Identities = 147/147 (100%)
Strand = Plus / Minus
Query: 1271 caggtaatgggtaaagtgccaaccatttcgatcaacaaaacagacggctgccacatttac 1330
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89124754 caggtaatgggtaaagtgccaaccatttcgatcaacaaaacagacggctgccacatttac 89124695
Query: 1331 ctgagcaagaattccctggattgtgagatagtcagtgccaaatcttctgagatgaatgtc 1390
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89124694 ctgagcaagaattccctggattgtgagatagtcagtgccaaatcttctgagatgaatgtc 89124635
Query: 1391 ctcattcctacagaaggcggtgacttc 1417
|||||||||||||||||||||||||||
Sbjct: 89124634 ctcattcctacagaaggcggtgacttc 89124608
Score = 291 bits (147), Expect = 6e-76
Identities = 147/147 (100%)
Strand = Plus / Minus
Query: 1271 caggtaatgggtaaagtgccaaccatttcgatcaacaaaacagacggctgccacatttac 1330
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89302988 caggtaatgggtaaagtgccaaccatttcgatcaacaaaacagacggctgccacatttac 89302929
Query: 1331 ctgagcaagaattccctggattgtgagatagtcagtgccaaatcttctgagatgaatgtc 1390
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89302928 ctgagcaagaattccctggattgtgagatagtcagtgccaaatcttctgagatgaatgtc 89302869
Query: 1391 ctcattcctacagaaggcggtgacttc 1417
|||||||||||||||||||||||||||
Sbjct: 89302868 ctcattcctacagaaggcggtgacttc 89302842
Score = 287 bits (145), Expect = 9e-75
Identities = 145/145 (100%)
Strand = Plus / Plus
Query: 368 aataagctttctgaattgttggcacccatctccgagcagatccaagaagtaataaccttt 427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89023930 aataagctttctgaattgttggcacccatctccgagcagatccaagaagtaataaccttt 89023989
Query: 428 cgggagaagaaccgaggcagcaagttgttcaatcacctgtcagctgtcagtgaaagcatc 487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89023990 cgggagaagaaccgaggcagcaagttgttcaatcacctgtcagctgtcagtgaaagcatc 89024049
Query: 488 caggccctgggttgggtggctatgg 512
|||||||||||||||||||||||||
Sbjct: 89024050 caggccctgggttgggtggctatgg 89024074
Score = 281 bits (142), Expect = 6e-73
Identities = 142/142 (100%)
Strand = Plus / Minus
Query: 371 aagctttctgaattgttggcacccatctccgagcagatccaagaagtaataacctttcgg 430
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89309905 aagctttctgaattgttggcacccatctccgagcagatccaagaagtaataacctttcgg 89309846
Query: 431 gagaagaaccgaggcagcaagttgttcaatcacctgtcagctgtcagtgaaagcatccag 490
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89309845 gagaagaaccgaggcagcaagttgttcaatcacctgtcagctgtcagtgaaagcatccag 89309786
Query: 491 gccctgggttgggtggctatgg 512
||||||||||||||||||||||
Sbjct: 89309785 gccctgggttgggtggctatgg 89309764
Score = 248 bits (125), Expect = 8e-63
Identities = 125/125 (100%)
Strand = Plus / Minus
Query: 1066 ggaaaatcaggagaatgtttccaacctggtgatagatgacacagagctgaaacaggtggc 1125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89125417 ggaaaatcaggagaatgtttccaacctggtgatagatgacacagagctgaaacaggtggc 89125358
Query: 1126 ttacatattcaagtgcgtcaactcgacattgcaaatcaagggcaaaattaactccattac 1185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89125357 ttacatattcaagtgcgtcaactcgacattgcaaatcaagggcaaaattaactccattac 89125298
Query: 1186 agtag 1190
|||||
Sbjct: 89125297 agtag 89125293
Score = 248 bits (125), Expect = 8e-63
Identities = 125/125 (100%)
Strand = Plus / Minus
Query: 1066 ggaaaatcaggagaatgtttccaacctggtgatagatgacacagagctgaaacaggtggc 1125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89303651 ggaaaatcaggagaatgtttccaacctggtgatagatgacacagagctgaaacaggtggc 89303592
Query: 1126 ttacatattcaagtgcgtcaactcgacattgcaaatcaagggcaaaattaactccattac 1185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89303591 ttacatattcaagtgcgtcaactcgacattgcaaatcaagggcaaaattaactccattac 89303532
Query: 1186 agtag 1190
|||||
Sbjct: 89303531 agtag 89303527
Score = 246 bits (124), Expect = 3e-62
Identities = 124/124 (100%)
Strand = Plus / Plus
Query: 62 aggtggtacattatggctgacatgcaaaatctggtagaaagattggagagagcagtgggc 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89018687 aggtggtacattatggctgacatgcaaaatctggtagaaagattggagagagcagtgggc 89018746
Query: 122 cgcctggaggcagtctcccatgcctctgacacacactgtggatatggagacagtgctgca 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89018747 cgcctggaggcagtctcccatgcctctgacacacactgtggatatggagacagtgctgca 89018806
Query: 182 aaag 185
||||
Sbjct: 89018807 aaag 89018810
Score = 234 bits (118), Expect = 1e-58
Identities = 188/205 (91%), Gaps = 6/205 (2%)
Strand = Plus / Minus
Query: 1418 aatgagttcccagtccctgagcagtttcagaccatatggaatgggcagaagttggtcacc 1477
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 89123757 aatgagttcccagtccctgagcagttcaagaccatatggaatgggcagaagttggtcacc 89123698
Query: 1478 acagtgacagaaattgctgggatagcgaagtgccactgggntcttttgccctc-ccctca 1536
|||||||||||||||||||| ||||||||||||||||| || ||||||||| ||||||
Sbjct: 89123697 acagtgacagaaattgctggataagcgaagtgccactgggttc-tttgccctctccctca 89123639
Query: 1537 cnacgtgggat-aatctgtatcaagatggntc-tttctagattncctctaccttnnctgc 1594
| |||||||| ||||||||||||||||| || |||||||||| |||||||||| ||||
Sbjct: 89123638 caccgtgggataaatctgtatcaagatggttcttttctagatttcctctacctt-tctgc 89123580
Query: 1595 tc-taaatgcttctctgctttgaga 1618
|| ||||||||||||||||||||||
Sbjct: 89123579 tcttaaatgcttctctgctttgaga 89123555
Score = 234 bits (118), Expect = 1e-58
Identities = 188/205 (91%), Gaps = 6/205 (2%)
Strand = Plus / Minus
Query: 1418 aatgagttcccagtccctgagcagtttcagaccatatggaatgggcagaagttggtcacc 1477
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 89301991 aatgagttcccagtccctgagcagttcaagaccatatggaatgggcagaagttggtcacc 89301932
Query: 1478 acagtgacagaaattgctgggatagcgaagtgccactgggntcttttgccctc-ccctca 1536
|||||||||||||||||||| ||||||||||||||||| || ||||||||| ||||||
Sbjct: 89301931 acagtgacagaaattgctggataagcgaagtgccactgggttc-tttgccctctccctca 89301873
Query: 1537 cnacgtgggat-aatctgtatcaagatggntc-tttctagattncctctaccttnnctgc 1594
| |||||||| ||||||||||||||||| || |||||||||| |||||||||| ||||
Sbjct: 89301872 caccgtgggataaatctgtatcaagatggttcttttctagatttcctctacctt-tctgc 89301814
Query: 1595 tc-taaatgcttctctgctttgaga 1618
|| ||||||||||||||||||||||
Sbjct: 89301813 tcttaaatgcttctctgctttgaga 89301789
Score = 212 bits (107), Expect = 4e-52
Identities = 107/107 (100%)
Strand = Plus / Plus
Query: 184 agcaggagcagctccgtatgtgcaagcatttgactcactgctggccggtcctgtggcgga 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89019710 agcaggagcagctccgtatgtgcaagcatttgactcactgctggccggtcctgtggcgga 89019769
Query: 244 atacctcaagatcagtaaagagattgggggagatgtgcagaaacatg 290
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89019770 atacctcaagatcagtaaagagattgggggagatgtgcagaaacatg 89019816
Score = 212 bits (107), Expect = 4e-52
Identities = 107/107 (100%)
Strand = Plus / Minus
Query: 598 ggataagaagcacgtggactgggtcaaagcttacttgagtatatggacagagctgcaggc 657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89307703 ggataagaagcacgtggactgggtcaaagcttacttgagtatatggacagagctgcaggc 89307644
Query: 658 ttacattaaggagttccatacgactggactggcctggagcaaaacgg 704
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89307643 ttacattaaggagttccatacgactggactggcctggagcaaaacgg 89307597
Score = 178 bits (90), Expect = 6e-42
Identities = 90/90 (100%)
Strand = Plus / Minus
Query: 1188 tagataactgtaagaaactcggtctggtgttcgatgacgtggtgggcattgtggagataa 1247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89125153 tagataactgtaagaaactcggtctggtgttcgatgacgtggtgggcattgtggagataa 89125094
Query: 1248 tcaatagtcgggatgtcaaagttcaggtaa 1277
||||||||||||||||||||||||||||||
Sbjct: 89125093 tcaatagtcgggatgtcaaagttcaggtaa 89125064
Score = 178 bits (90), Expect = 6e-42
Identities = 90/90 (100%)
Strand = Plus / Minus
Query: 1188 tagataactgtaagaaactcggtctggtgttcgatgacgtggtgggcattgtggagataa 1247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89303387 tagataactgtaagaaactcggtctggtgttcgatgacgtggtgggcattgtggagataa 89303328
Query: 1248 tcaatagtcgggatgtcaaagttcaggtaa 1277
||||||||||||||||||||||||||||||
Sbjct: 89303327 tcaatagtcgggatgtcaaagttcaggtaa 89303298
Score = 174 bits (88), Expect = 1e-40
Identities = 88/88 (100%)
Strand = Plus / Plus
Query: 511 ggctcccaagcctggtccctatgtgaaggaaatgaatgatgctgccatgttttatacaaa 570
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89024174 ggctcccaagcctggtccctatgtgaaggaaatgaatgatgctgccatgttttatacaaa 89024233
Query: 571 ccgagtcctcaaggagtacaaagatgtg 598
||||||||||||||||||||||||||||
Sbjct: 89024234 ccgagtcctcaaggagtacaaagatgtg 89024261
Score = 174 bits (88), Expect = 1e-40
Identities = 88/88 (100%)
Strand = Plus / Minus
Query: 511 ggctcccaagcctggtccctatgtgaaggaaatgaatgatgctgccatgttttatacaaa 570
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89309664 ggctcccaagcctggtccctatgtgaaggaaatgaatgatgctgccatgttttatacaaa 89309605
Query: 571 ccgagtcctcaaggagtacaaagatgtg 598
||||||||||||||||||||||||||||
Sbjct: 89309604 ccgagtcctcaaggagtacaaagatgtg 89309577
Score = 155 bits (78), Expect = 9e-35
Identities = 78/78 (100%)
Strand = Plus / Plus
Query: 290 gcggaaatggtccatacaggtctgaagttggagcaagctctcttggttacagcctctcag 349
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89021556 gcggaaatggtccatacaggtctgaagttggagcaagctctcttggttacagcctctcag 89021615
Query: 350 tgccagcagcctgtaggt 367
||||||||||||||||||
Sbjct: 89021616 tgccagcagcctgtaggt 89021633
Score = 149 bits (75), Expect = 6e-33
Identities = 75/75 (100%)
Strand = Plus / Minus
Query: 807 gttcaggctcagatgagtctgcctcacgctcagcactgtttgcgcagattaatcaagggg 866
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89127944 gttcaggctcagatgagtctgcctcacgctcagcactgtttgcgcagattaatcaagggg 89127885
Query: 867 agagcatcacacacg 881
|||||||||||||||
Sbjct: 89127884 agagcatcacacacg 89127870
Score = 149 bits (75), Expect = 6e-33
Identities = 75/75 (100%)
Strand = Plus / Minus
Query: 807 gttcaggctcagatgagtctgcctcacgctcagcactgtttgcgcagattaatcaagggg 866
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89306184 gttcaggctcagatgagtctgcctcacgctcagcactgtttgcgcagattaatcaagggg 89306125
Query: 867 agagcatcacacacg 881
|||||||||||||||
Sbjct: 89306124 agagcatcacacacg 89306110
Score = 131 bits (66), Expect = 1e-27
Identities = 66/66 (100%)
Strand = Plus / Plus
Query: 1 ctgggcggttcttgccggaagtggagagcggctgatcgcagtcccgaggtgaggaactct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89004616 ctgggcggttcttgccggaagtggagagcggctgatcgcagtcccgaggtgaggaactct 89004675
Query: 61 gaggtg 66
||||||
Sbjct: 89004676 gaggtg 89004681
Score = 113 bits (57), Expect = 3e-22
Identities = 57/57 (100%)
Strand = Plus / Minus
Query: 703 ggggcccgtggctaaagaactgagtggattgccatctggaccctctgctggatcagg 759
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89128048 ggggcccgtggctaaagaactgagtggattgccatctggaccctctgctggatcagg 89127992
Score = 113 bits (57), Expect = 3e-22
Identities = 57/57 (100%)
Strand = Plus / Minus
Query: 703 ggggcccgtggctaaagaactgagtggattgccatctggaccctctgctggatcagg 759
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89306288 ggggcccgtggctaaagaactgagtggattgccatctggaccctctgctggatcagg 89306232
>gb|GL894875.2| Sus scrofa unplaced genomic scaffold ChrUScaf2759
Length = 42002
Score = 63.9 bits (32), Expect = 3e-07
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 1269 ttcaggtaatgggtaaagtgccaaccatttcgatcaacaaaacagacggctgccacattt 1328
||||||||||||| ||||||||||| ||||| || || || ||||| ||||||||||| |
Sbjct: 35571 ttcaggtaatggggaaagtgccaacaatttccattaataagacagaaggctgccacatat 35630
Query: 1329 acct 1332
||||
Sbjct: 35631 acct 35634
>Sscrofa_Chr07
|| Length = 134764511
Score = 63.9 bits (32), Expect = 3e-07
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 1269 ttcaggtaatgggtaaagtgccaaccatttcgatcaacaaaacagacggctgccacattt 1328
||||||||||||| ||||||||||| ||||| || || || ||||| ||||||||||| |
Sbjct: 14048225 ttcaggtaatggggaaagtgccaacaatttccattaataagacagaaggctgccacatat 14048284
Query: 1329 acct 1332
||||
Sbjct: 14048285 acct 14048288
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 43,997,923
Number of extensions: 214
Number of successful extensions: 214
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 210
Number of HSP's successfully gapped: 25
Length of query: 1618
Length of database: 2,808,509,378
Length adjustment: 22
Effective length of query: 1596
Effective length of database: 2,808,408,574
Effective search space: 4482220084104
Effective search space used: 4482220084104
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)