Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007220
(2360 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001030182.1| adenylyl cyclase-associated protein 1 [Bos t... 785 0.0
Alignment gi|XP_002691825.1| PREDICTED: CAP1 protein-like [Bos taurus]. 757 0.0
Alignment gi|XP_600414.2| PREDICTED: CAP1 protein-like isoform 2 [Bos tau... 757 0.0
Alignment gi|NP_001092449.1| adenylyl cyclase-associated protein 2 [Bos t... 526 e-149
>ref|NP_001030182.1| adenylyl cyclase-associated protein 1 [Bos taurus].
Length = 472
Score = 785 bits (2027), Expect = 0.0
Identities = 402/475 (84%), Positives = 414/475 (87%)
Frame = +2
Query: 98 MADMQNLVERLERAVGRLEAVSHASDTHCGYGDSAAKAGAAPYVQAFDSLLAGPVAEYLK 277
MADM+NLVERLER VGRLEAVSHASDTHCGYGDSAAKAG PYVQAFDSLLAGPVAEYLK
Sbjct: 1 MADMRNLVERLERVVGRLEAVSHASDTHCGYGDSAAKAGTTPYVQAFDSLLAGPVAEYLK 60
Query: 278 ISKEIGGDVQKHAEMVHTGLKLEQALLVTASQCQQPVGNKLSELLAPISEQIQEVITFRE 457
ISKEIGGDVQKHAEMVHTGLKLE+ALLVTASQCQQP GNKLS+LLAPISEQIQEV+TFRE
Sbjct: 61 ISKEIGGDVQKHAEMVHTGLKLERALLVTASQCQQPAGNKLSDLLAPISEQIQEVVTFRE 120
Query: 458 KNRGSKLFNHLSAVSESIQALGWVAMAPKPGPYVKEMNDAAMFYTNRVLKEYXXXXXXXX 637
KNRGSKLFNHLSAVSESIQALGWVAMAPKPGPYVKEMNDAAMFYTNRVLKEY
Sbjct: 121 KNRGSKLFNHLSAVSESIQALGWVAMAPKPGPYVKEMNDAAMFYTNRVLKEYKDVDKKHV 180
Query: 638 XXXXAYLSIWTELQAYIKEFHTTGLAWSKTGPVAKELXXXXXXXXXXXXXXXXXXXXXXX 817
AYLSIWTELQAYIKEFHTTGLAWS+TGPVAKEL
Sbjct: 181 DWVKAYLSIWTELQAYIKEFHTTGLAWSRTGPVAKELSGLPSGPSAGSGPPPPPPGPPPP 240
Query: 818 XXXXXXXXXXXXXXXALFAQINQGESITHALKHVSDDMKTHKNPALKAQSGPVRTGPKPF 997
ALFAQINQGESITHALKHVSDDMKTHKNPALKAQSG +R+GPKPF
Sbjct: 241 PVPTSSGSDDSASRSALFAQINQGESITHALKHVSDDMKTHKNPALKAQSGLIRSGPKPF 300
Query: 998 SASKPGISPSPKPVTKKEPALLELEGKKWRVENQENVSNLVIDDTELKQVAYIFKCVNST 1177
SASKP PKPV KKEPALLELEGKKWRVENQENVSNL+I+DTELKQVAYIFKCVNST
Sbjct: 301 SASKP---DPPKPVAKKEPALLELEGKKWRVENQENVSNLMIEDTELKQVAYIFKCVNST 357
Query: 1178 LQIKGKINSITVDNCKKLGLVFDDVVGIVEIINSRDVKVQVMGKVPTISINKTDGCHIYL 1357
LQIKGKINSITVDNCKKLGLVFDDVVGIVEIINS+DVKVQVMGKVPTISINKTDGCH+YL
Sbjct: 358 LQIKGKINSITVDNCKKLGLVFDDVVGIVEIINSKDVKVQVMGKVPTISINKTDGCHVYL 417
Query: 1358 SKNSLDCEIVSAKSSEMNVLIPTEGGDFNEFPVPEQFKTIWNGQKLVTTVTEIAG 1522
SKNSLDCEIVSAKSSEMNVLIPTEGGDFNEFPVPEQFKT+WNGQKLVTTVTEIAG
Sbjct: 418 SKNSLDCEIVSAKSSEMNVLIPTEGGDFNEFPVPEQFKTLWNGQKLVTTVTEIAG 472
>ref|XP_002691825.1| PREDICTED: CAP1 protein-like [Bos taurus].
Length = 471
Score = 757 bits (1955), Expect = 0.0
Identities = 397/476 (83%), Positives = 408/476 (85%), Gaps = 1/476 (0%)
Frame = +2
Query: 98 MADMQNLVERLERAVGRLEAVSHASDTHCGYGDSAAKAGAAPYVQAFDSLLAGPVAEYLK 277
MADM+NLVERLER VGRLEAVSHASDTHCGYGDSAAK G PYVQAFDSLLAGPVAEYLK
Sbjct: 1 MADMRNLVERLERVVGRLEAVSHASDTHCGYGDSAAK-GTTPYVQAFDSLLAGPVAEYLK 59
Query: 278 ISKEIGGDVQKHAEMVHTGLKLEQALLVTASQCQQPVGNKLSELLAPISEQIQEVITFRE 457
ISKE GGDVQKHAEMVHTGLKLE+ALLVTASQCQQP GNKLS+LLAPISEQIQEV+TFRE
Sbjct: 60 ISKESGGDVQKHAEMVHTGLKLERALLVTASQCQQPAGNKLSDLLAPISEQIQEVVTFRE 119
Query: 458 KNRGSKLFNHLSAVSESIQALGWVAMAPKPGPYVKEMNDAAMFYTNRVLKEYXXXXXXXX 637
KNRGSKLFNHLSAVSESIQALGWVAMAPKPG YVKEMNDAAMFYTNRVLKEY
Sbjct: 120 KNRGSKLFNHLSAVSESIQALGWVAMAPKPGLYVKEMNDAAMFYTNRVLKEYKDVDKKHV 179
Query: 638 XXXXAYLSIWTELQAYIKEFHTTGLAWSKTGPVAKELXXXXXXXXXXXXXXXXXXXXXXX 817
AYLSIWTELQAYIKEFHTTGLAWS+TGPVAKEL
Sbjct: 180 DWVKAYLSIWTELQAYIKEFHTTGLAWSRTGPVAKELSGLPSGPSAGSGPPPPPRQVHLP 239
Query: 818 XXXXXXXXXXXXXXX-ALFAQINQGESITHALKHVSDDMKTHKNPALKAQSGPVRTGPKP 994
ALFAQINQGESI HALKHVSDDMKTHKNPALKAQSG +R+GPKP
Sbjct: 240 PPVPTSSGSDDSASRSALFAQINQGESIIHALKHVSDDMKTHKNPALKAQSGLIRSGPKP 299
Query: 995 FSASKPGISPSPKPVTKKEPALLELEGKKWRVENQENVSNLVIDDTELKQVAYIFKCVNS 1174
FSASKP PKPVTKKEPALLELEGKKWRVENQENVSNLVI+DTELKQVAYIFKCVNS
Sbjct: 300 FSASKPD---PPKPVTKKEPALLELEGKKWRVENQENVSNLVIEDTELKQVAYIFKCVNS 356
Query: 1175 TLQIKGKINSITVDNCKKLGLVFDDVVGIVEIINSRDVKVQVMGKVPTISINKTDGCHIY 1354
TLQIKGKINSITVDNCKKLGLVFDDVVGIVEIINS+DV VQVMGKVPTISINKTDGCH+Y
Sbjct: 357 TLQIKGKINSITVDNCKKLGLVFDDVVGIVEIINSKDVTVQVMGKVPTISINKTDGCHVY 416
Query: 1355 LSKNSLDCEIVSAKSSEMNVLIPTEGGDFNEFPVPEQFKTIWNGQKLVTTVTEIAG 1522
LSKNSLDCEIVSAKSSEMNV IPTEGGDFNEFPV EQFKT+WNGQKLVTTVTEIAG
Sbjct: 417 LSKNSLDCEIVSAKSSEMNV-IPTEGGDFNEFPVAEQFKTLWNGQKLVTTVTEIAG 471
>ref|XP_600414.2| PREDICTED: CAP1 protein-like isoform 2 [Bos taurus].
Length = 471
Score = 757 bits (1955), Expect = 0.0
Identities = 397/476 (83%), Positives = 408/476 (85%), Gaps = 1/476 (0%)
Frame = +2
Query: 98 MADMQNLVERLERAVGRLEAVSHASDTHCGYGDSAAKAGAAPYVQAFDSLLAGPVAEYLK 277
MADM+NLVERLER VGRLEAVSHASDTHCGYGDSAAK G PYVQAFDSLLAGPVAEYLK
Sbjct: 1 MADMRNLVERLERVVGRLEAVSHASDTHCGYGDSAAK-GTTPYVQAFDSLLAGPVAEYLK 59
Query: 278 ISKEIGGDVQKHAEMVHTGLKLEQALLVTASQCQQPVGNKLSELLAPISEQIQEVITFRE 457
ISKE GGDVQKHAEMVHTGLKLE+ALLVTASQCQQP GNKLS+LLAPISEQIQEV+TFRE
Sbjct: 60 ISKESGGDVQKHAEMVHTGLKLERALLVTASQCQQPAGNKLSDLLAPISEQIQEVVTFRE 119
Query: 458 KNRGSKLFNHLSAVSESIQALGWVAMAPKPGPYVKEMNDAAMFYTNRVLKEYXXXXXXXX 637
KNRGSKLFNHLSAVSESIQALGWVAMAPKPG YVKEMNDAAMFYTNRVLKEY
Sbjct: 120 KNRGSKLFNHLSAVSESIQALGWVAMAPKPGLYVKEMNDAAMFYTNRVLKEYKDVDKKHV 179
Query: 638 XXXXAYLSIWTELQAYIKEFHTTGLAWSKTGPVAKELXXXXXXXXXXXXXXXXXXXXXXX 817
AYLSIWTELQAYIKEFHTTGLAWS+TGPVAKEL
Sbjct: 180 DWVKAYLSIWTELQAYIKEFHTTGLAWSRTGPVAKELSGLPSGPSAGSGPPPPPRQVHLP 239
Query: 818 XXXXXXXXXXXXXXX-ALFAQINQGESITHALKHVSDDMKTHKNPALKAQSGPVRTGPKP 994
ALFAQINQGESI HALKHVSDDMKTHKNPALKAQSG +R+GPKP
Sbjct: 240 PPVPTSSGSDDSASRSALFAQINQGESIIHALKHVSDDMKTHKNPALKAQSGLIRSGPKP 299
Query: 995 FSASKPGISPSPKPVTKKEPALLELEGKKWRVENQENVSNLVIDDTELKQVAYIFKCVNS 1174
FSASKP PKPVTKKEPALLELEGKKWRVENQENVSNLVI+DTELKQVAYIFKCVNS
Sbjct: 300 FSASKPD---PPKPVTKKEPALLELEGKKWRVENQENVSNLVIEDTELKQVAYIFKCVNS 356
Query: 1175 TLQIKGKINSITVDNCKKLGLVFDDVVGIVEIINSRDVKVQVMGKVPTISINKTDGCHIY 1354
TLQIKGKINSITVDNCKKLGLVFDDVVGIVEIINS+DV VQVMGKVPTISINKTDGCH+Y
Sbjct: 357 TLQIKGKINSITVDNCKKLGLVFDDVVGIVEIINSKDVTVQVMGKVPTISINKTDGCHVY 416
Query: 1355 LSKNSLDCEIVSAKSSEMNVLIPTEGGDFNEFPVPEQFKTIWNGQKLVTTVTEIAG 1522
LSKNSLDCEIVSAKSSEMNV IPTEGGDFNEFPV EQFKT+WNGQKLVTTVTEIAG
Sbjct: 417 LSKNSLDCEIVSAKSSEMNV-IPTEGGDFNEFPVAEQFKTLWNGQKLVTTVTEIAG 471
>ref|NP_001092449.1| adenylyl cyclase-associated protein 2 [Bos taurus].
Length = 486
Score = 526 bits (1355), Expect = e-149
Identities = 280/480 (58%), Positives = 337/480 (70%), Gaps = 7/480 (1%)
Frame = +2
Query: 98 MADMQNLVERLERAVGRLE---AVSHASDTHCGYGDSAAKAGAAPYVQAFDSLLAGPVAE 268
MA+MQ L+ERLERAVGRLE A SH CG + G AP V+AFD L+ VAE
Sbjct: 1 MAEMQGLMERLERAVGRLELLSAGSHRPPGDCGE-INGVNGGVAPSVEAFDKLMNSMVAE 59
Query: 269 YLKISKEIGGDVQKHAEMVHTGLKLEQALLVTASQCQQPVGNKLSELLAPISEQIQEVIT 448
+LK S+ + GDV+ HAEMVH+ + ++A L+ ASQ QQP N ++ LL PISE+IQE+ T
Sbjct: 60 FLKKSRILAGDVETHAEMVHSAFQAQRAFLLMASQYQQPQENDVAALLKPISEKIQEIQT 119
Query: 449 FREKNRGSKLFNHLSAVSESIQALGWVAMAPKPGPYVKEMNDAAMFYTNRVLKEYXXXXX 628
FRE+NRGS +FNHLSAVSESI ALGW+A++PKPGPYVKEMNDAA FYTNRVLK+Y
Sbjct: 120 FRERNRGSTMFNHLSAVSESIPALGWIAVSPKPGPYVKEMNDAATFYTNRVLKDYKHSDL 179
Query: 629 XXXXXXXAYLSIWTELQAYIKEFHTTGLAWSKTGPVAKELXXXXXXXXXXXXXXXXXXXX 808
+YL+IW+ELQAYIKE HTTGL WSKTGPVA
Sbjct: 180 RHVDWVKSYLNIWSELQAYIKEHHTTGLTWSKTGPVASTASALSVLSLGPGLPPPPPPPP 239
Query: 809 XXXXXXXXXXXXXXXXXX----ALFAQINQGESITHALKHVSDDMKTHKNPALKAQSGPV 976
ALFAQ+NQGE+IT L+HV+DD KT+KNP L+A G
Sbjct: 240 PPGPPLLFESEGIKEPSSPSRSALFAQLNQGEAITKGLRHVTDDQKTYKNPNLRAHGGQ- 298
Query: 977 RTGPKPFSASKPGISPSPKPVTKKEPALLELEGKKWRVENQENVSNLVIDDTELKQVAYI 1156
P P + PG +KK +LELEGKKWRVE QE+ ++LVI +T L+QVAYI
Sbjct: 299 --SPSPTKSHTPGPKSPQSHPSKKHTPVLELEGKKWRVEYQEDRNDLVISETALRQVAYI 356
Query: 1157 FKCVNSTLQIKGKINSITVDNCKKLGLVFDDVVGIVEIINSRDVKVQVMGKVPTISINKT 1336
FKC STLQIKGKINSI +DNCKK GLVFD+VVGIVE+INS+D+++QVMGKVPTISINKT
Sbjct: 357 FKCGKSTLQIKGKINSIIIDNCKKFGLVFDNVVGIVEVINSKDIQMQVMGKVPTISINKT 416
Query: 1337 DGCHIYLSKNSLDCEIVSAKSSEMNVLIPTEGGDFNEFPVPEQFKTIWNGQKLVTTVTEI 1516
+GCHIYLS+++LDCEIVSAKSSEMN+LIP + GD+ EFPVPEQFKT W+G KL+T TEI
Sbjct: 417 EGCHIYLSEDALDCEIVSAKSSEMNILIP-QDGDYREFPVPEQFKTAWDGAKLITEPTEI 475
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 92,075,153
Number of extensions: 2505524
Number of successful extensions: 7989
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 7882
Number of HSP's successfully gapped: 7
Length of query: 786
Length of database: 17,681,374
Length adjustment: 110
Effective length of query: 676
Effective length of database: 14,041,694
Effective search space: 9492185144
Effective search space used: 9492185144
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007220
(2360 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_848565.1| PREDICTED: similar to Adenylyl cyclase-associat... 799 0.0
Alignment gi|XP_532545.2| PREDICTED: similar to Adenylyl cyclase-associat... 785 0.0
Alignment gi|XP_856632.1| PREDICTED: similar to Adenylyl cyclase-associat... 777 0.0
Alignment gi|XP_535897.2| PREDICTED: similar to adenylyl cyclase-associat... 534 e-151
Alignment gi|XP_858447.1| PREDICTED: similar to adenylyl cyclase-associat... 495 e-140
Alignment gi|XP_856592.1| PREDICTED: similar to CAP, adenylate cyclase-as... 462 e-130
Alignment gi|XP_856556.1| PREDICTED: similar to CAP, adenylate cyclase-as... 428 e-119
Alignment gi|XP_856509.1| PREDICTED: similar to CAP, adenylate cyclase-as... 401 e-111
Alignment gi|XP_856469.1| PREDICTED: similar to CAP, adenylate cyclase-as... 385 e-106
Alignment gi|XP_858406.1| PREDICTED: similar to adenylyl cyclase-associat... 62 3e-09
>ref|XP_848565.1| PREDICTED: similar to Adenylyl cyclase-associated protein 1 (CAP 1)
isoform 2 [Canis familiaris].
Length = 475
Score = 799 bits (2063), Expect = 0.0
Identities = 406/475 (85%), Positives = 418/475 (88%)
Frame = +2
Query: 98 MADMQNLVERLERAVGRLEAVSHASDTHCGYGDSAAKAGAAPYVQAFDSLLAGPVAEYLK 277
MADMQ LVERLERAVGRLEAVSHASD HCGYGDSA KAGAAPYVQAFDSLLAGPVAEYLK
Sbjct: 1 MADMQKLVERLERAVGRLEAVSHASDMHCGYGDSAPKAGAAPYVQAFDSLLAGPVAEYLK 60
Query: 278 ISKEIGGDVQKHAEMVHTGLKLEQALLVTASQCQQPVGNKLSELLAPISEQIQEVITFRE 457
ISKEIGGDVQKHAEMVHTGLKLE+ALLVTASQCQQP GNKLS+LLAPISEQIQEVIT+RE
Sbjct: 61 ISKEIGGDVQKHAEMVHTGLKLERALLVTASQCQQPAGNKLSDLLAPISEQIQEVITYRE 120
Query: 458 KNRGSKLFNHLSAVSESIQALGWVAMAPKPGPYVKEMNDAAMFYTNRVLKEYXXXXXXXX 637
KNRGSKLFNHLSAVSESIQALGWVAMAPKPGPYVKEMNDAAMFYTNRVLKEY
Sbjct: 121 KNRGSKLFNHLSAVSESIQALGWVAMAPKPGPYVKEMNDAAMFYTNRVLKEYKDVDKKHV 180
Query: 638 XXXXAYLSIWTELQAYIKEFHTTGLAWSKTGPVAKELXXXXXXXXXXXXXXXXXXXXXXX 817
AYLSIWTELQAYIKEFHTTGLAWSKTGPVA+EL
Sbjct: 181 DWVKAYLSIWTELQAYIKEFHTTGLAWSKTGPVAQELSGLPSGPSAGSGPPPPPPGPPPP 240
Query: 818 XXXXXXXXXXXXXXXALFAQINQGESITHALKHVSDDMKTHKNPALKAQSGPVRTGPKPF 997
ALFAQINQGESITHALKHVSDDMKTHKNPALKAQSGPVR+GPKPF
Sbjct: 241 PVPTSSGSDESASRSALFAQINQGESITHALKHVSDDMKTHKNPALKAQSGPVRSGPKPF 300
Query: 998 SASKPGISPSPKPVTKKEPALLELEGKKWRVENQENVSNLVIDDTELKQVAYIFKCVNST 1177
SA KPG+SPSPKP KKEPA+LELEGKKWRVENQENVSNLVIDDTELKQVAYI+KCVN+T
Sbjct: 301 SAPKPGVSPSPKPTAKKEPAVLELEGKKWRVENQENVSNLVIDDTELKQVAYIYKCVNTT 360
Query: 1178 LQIKGKINSITVDNCKKLGLVFDDVVGIVEIINSRDVKVQVMGKVPTISINKTDGCHIYL 1357
LQIKGKINSITVDNCKKLGLVFDDVVGIVEIINSRDVKVQVMGKVPTISINKTDGCH+YL
Sbjct: 361 LQIKGKINSITVDNCKKLGLVFDDVVGIVEIINSRDVKVQVMGKVPTISINKTDGCHVYL 420
Query: 1358 SKNSLDCEIVSAKSSEMNVLIPTEGGDFNEFPVPEQFKTIWNGQKLVTTVTEIAG 1522
SKNSLDCEIVSAKSSEMNVLIPTEGGD+NEFPVPEQFKT+WNGQKLVTTVTEIAG
Sbjct: 421 SKNSLDCEIVSAKSSEMNVLIPTEGGDYNEFPVPEQFKTLWNGQKLVTTVTEIAG 475
>ref|XP_532545.2| PREDICTED: similar to Adenylyl cyclase-associated protein 1 (CAP 1)
isoform 1 [Canis familiaris].
Length = 501
Score = 785 bits (2026), Expect = 0.0
Identities = 406/501 (81%), Positives = 418/501 (83%), Gaps = 26/501 (5%)
Frame = +2
Query: 98 MADMQNLVERLERAVGRLEAVSHASDTHCGYGDSAAKAGAAPYVQAFDSLLAGPVAEYLK 277
MADMQ LVERLERAVGRLEAVSHASD HCGYGDSA KAGAAPYVQAFDSLLAGPVAEYLK
Sbjct: 1 MADMQKLVERLERAVGRLEAVSHASDMHCGYGDSAPKAGAAPYVQAFDSLLAGPVAEYLK 60
Query: 278 ISKEIGGDVQKHAEMVHTGLKLEQALLVTASQCQQPVGNKLSELLAPISEQIQEVITFRE 457
ISKEIGGDVQKHAEMVHTGLKLE+ALLVTASQCQQP GNKLS+LLAPISEQIQEVIT+RE
Sbjct: 61 ISKEIGGDVQKHAEMVHTGLKLERALLVTASQCQQPAGNKLSDLLAPISEQIQEVITYRE 120
Query: 458 KNRGSKLFNHLSAVSESIQALGWVAMAPKPGPYVKEMNDAAMFYTNRVLKEYXXXXXXXX 637
KNRGSKLFNHLSAVSESIQALGWVAMAPKPGPYVKEMNDAAMFYTNRVLKEY
Sbjct: 121 KNRGSKLFNHLSAVSESIQALGWVAMAPKPGPYVKEMNDAAMFYTNRVLKEYKDVDKKHV 180
Query: 638 XXXXAYLSIWTELQAYIKEFHTTGLAWSKTGPVAKELXXXXXXXXXXXXXXXXXXXXXXX 817
AYLSIWTELQAYIKEFHTTGLAWSKTGPVA+EL
Sbjct: 181 DWVKAYLSIWTELQAYIKEFHTTGLAWSKTGPVAQELSGLPSGPSAGSGPPPPPPGPPPP 240
Query: 818 XXXXXXXXXXXXXXXALFAQINQGESITH--------------------------ALKHV 919
ALFAQINQGESITH ALKHV
Sbjct: 241 PVPTSSGSDESASRSALFAQINQGESITHGKPDGLNQNPGIRGMKERHKVAVVPTALKHV 300
Query: 920 SDDMKTHKNPALKAQSGPVRTGPKPFSASKPGISPSPKPVTKKEPALLELEGKKWRVENQ 1099
SDDMKTHKNPALKAQSGPVR+GPKPFSA KPG+SPSPKP KKEPA+LELEGKKWRVENQ
Sbjct: 301 SDDMKTHKNPALKAQSGPVRSGPKPFSAPKPGVSPSPKPTAKKEPAVLELEGKKWRVENQ 360
Query: 1100 ENVSNLVIDDTELKQVAYIFKCVNSTLQIKGKINSITVDNCKKLGLVFDDVVGIVEIINS 1279
ENVSNLVIDDTELKQVAYI+KCVN+TLQIKGKINSITVDNCKKLGLVFDDVVGIVEIINS
Sbjct: 361 ENVSNLVIDDTELKQVAYIYKCVNTTLQIKGKINSITVDNCKKLGLVFDDVVGIVEIINS 420
Query: 1280 RDVKVQVMGKVPTISINKTDGCHIYLSKNSLDCEIVSAKSSEMNVLIPTEGGDFNEFPVP 1459
RDVKVQVMGKVPTISINKTDGCH+YLSKNSLDCEIVSAKSSEMNVLIPTEGGD+NEFPVP
Sbjct: 421 RDVKVQVMGKVPTISINKTDGCHVYLSKNSLDCEIVSAKSSEMNVLIPTEGGDYNEFPVP 480
Query: 1460 EQFKTIWNGQKLVTTVTEIAG 1522
EQFKT+WNGQKLVTTVTEIAG
Sbjct: 481 EQFKTLWNGQKLVTTVTEIAG 501
>ref|XP_856632.1| PREDICTED: similar to Adenylyl cyclase-associated protein 1 (CAP 1)
isoform 7 [Canis familiaris].
Length = 490
Score = 777 bits (2007), Expect = 0.0
Identities = 403/492 (81%), Positives = 416/492 (84%), Gaps = 17/492 (3%)
Frame = +2
Query: 98 MADMQNLVERLERAVGRLEAVSHASDTHCGYGDSAAKAGAAPYVQAFDSLLAGPVAEYLK 277
MADMQ LVERLERAVGRLEAVSHASD HCGYGDSA KAGAAPYVQAFDSLLAGPVAEYLK
Sbjct: 1 MADMQKLVERLERAVGRLEAVSHASDMHCGYGDSAPKAGAAPYVQAFDSLLAGPVAEYLK 60
Query: 278 ISKEIGGDVQKHAEMVHTGLKLEQALLVTASQCQQPVGNKLSELLAPISEQIQEVITFRE 457
ISKEIGGDVQKHAEMVHTGLKLE+ALLVTASQCQQP GNKLS+LLAPISEQIQEVIT+RE
Sbjct: 61 ISKEIGGDVQKHAEMVHTGLKLERALLVTASQCQQPAGNKLSDLLAPISEQIQEVITYRE 120
Query: 458 KNRGSKLFNHLSAVSESIQALGWVAMAPKPGPYVKEMNDAAMFYTNRVLKEYXXXXXXXX 637
KNRGSKLFNHLSAVSESIQALGWVAMAPKPGPYVKEMNDAAMFYTNRVLKEY
Sbjct: 121 KNRGSKLFNHLSAVSESIQALGWVAMAPKPGPYVKEMNDAAMFYTNRVLKEYKDVDKKHV 180
Query: 638 XXXXAYLSIWTELQAYIKEFHTTGLAWSKTGPVAK-----------------ELXXXXXX 766
AYLSIWTELQAYIKEFHTTGLAWSKT V+K +L
Sbjct: 181 DWVKAYLSIWTELQAYIKEFHTTGLAWSKT--VSKSFLPLSVPPRQEDGCYLQLSGLPSG 238
Query: 767 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALFAQINQGESITHALKHVSDDMKTHKN 946
ALFAQINQGESITHALKHVSDDMKTHKN
Sbjct: 239 PSAGSGPPPPPPGPPPPPVPTSSGSDESASRSALFAQINQGESITHALKHVSDDMKTHKN 298
Query: 947 PALKAQSGPVRTGPKPFSASKPGISPSPKPVTKKEPALLELEGKKWRVENQENVSNLVID 1126
PALKAQSGPVR+GPKPFSA KPG+SPSPKP KKEPA+LELEGKKWRVENQENVSNLVID
Sbjct: 299 PALKAQSGPVRSGPKPFSAPKPGVSPSPKPTAKKEPAVLELEGKKWRVENQENVSNLVID 358
Query: 1127 DTELKQVAYIFKCVNSTLQIKGKINSITVDNCKKLGLVFDDVVGIVEIINSRDVKVQVMG 1306
DTELKQVAYI+KCVN+TLQIKGKINSITVDNCKKLGLVFDDVVGIVEIINSRDVKVQVMG
Sbjct: 359 DTELKQVAYIYKCVNTTLQIKGKINSITVDNCKKLGLVFDDVVGIVEIINSRDVKVQVMG 418
Query: 1307 KVPTISINKTDGCHIYLSKNSLDCEIVSAKSSEMNVLIPTEGGDFNEFPVPEQFKTIWNG 1486
KVPTISINKTDGCH+YLSKNSLDCEIVSAKSSEMNVLIPTEGGD+NEFPVPEQFKT+WNG
Sbjct: 419 KVPTISINKTDGCHVYLSKNSLDCEIVSAKSSEMNVLIPTEGGDYNEFPVPEQFKTLWNG 478
Query: 1487 QKLVTTVTEIAG 1522
QKLVTTVTEIAG
Sbjct: 479 QKLVTTVTEIAG 490
>ref|XP_535897.2| PREDICTED: similar to adenylyl cyclase-associated protein 2 isoform 1
[Canis familiaris].
Length = 477
Score = 534 bits (1376), Expect = e-151
Identities = 286/484 (59%), Positives = 344/484 (71%), Gaps = 9/484 (1%)
Frame = +2
Query: 98 MADMQNLVERLERAVGRLEAVSHASDTHCGYGD----SAAKAGAAPYVQAFDSLLAGPVA 265
MA+MQ L+ERLER VGRLE +S +++H GD + G AP V+AFD L+ VA
Sbjct: 1 MAEMQGLMERLERVVGRLEVLS--AESHRPPGDFGEINGVNGGVAPSVEAFDKLMNSMVA 58
Query: 266 EYLKISKEIGGDVQKHAEMVHTGLKLEQALLVTASQCQQPVGNKLSELLAPISEQIQEVI 445
E+LK S+ + GDV+ HAEMVH+ + ++A L+ ASQ QQP N ++ LL PISE+IQE+
Sbjct: 59 EFLKKSRILAGDVETHAEMVHSAFQAQRAFLLMASQHQQPQENDVAALLKPISEKIQEIQ 118
Query: 446 TFREKNRGSKLFNHLSAVSESIQALGWVAMAPKPGPYVKEMNDAAMFYTNRVLKEYXXXX 625
TFRE+NRGSK+FNHLSAVSESI ALGW+A++PKPGPYVKEMNDAA FYTNRVLK+Y
Sbjct: 119 TFRERNRGSKMFNHLSAVSESIPALGWIAVSPKPGPYVKEMNDAATFYTNRVLKDYKHSD 178
Query: 626 XXXXXXXXAYLSIWTELQAYIKEFHTTGLAWSKTGPVAKELXXXXXXXXXXXXXXXXXXX 805
+YL+IW+ELQAYIKE HTTGL WSKTGPVA
Sbjct: 179 LRHVDWVKSYLNIWSELQAYIKEHHTTGLTWSKTGPVASTASALSVLSPGPGLPPPPPPP 238
Query: 806 XXXXXXXXXXXXXXXXXXX----ALFAQINQGESITHALKHVSDDMKTHKNPALKAQSGP 973
ALFAQ+NQGE IT L+HV+DD KTHKNP+L+A G
Sbjct: 239 PPPGPPPFFENEGRREESSPSRSALFAQLNQGEEITKGLRHVTDDQKTHKNPSLRAPGGQ 298
Query: 974 VRTGPKPFSASKPGI-SPSPKPVTKKEPALLELEGKKWRVENQENVSNLVIDDTELKQVA 1150
P P + PG +P P K P +LELEGKKWRVE QE ++LVI +TELKQVA
Sbjct: 299 T---PSPTKSHTPGSRAPQSHPPQKHAP-VLELEGKKWRVEYQEGRNDLVIAETELKQVA 354
Query: 1151 YIFKCVNSTLQIKGKINSITVDNCKKLGLVFDDVVGIVEIINSRDVKVQVMGKVPTISIN 1330
YIFKC STLQ+KGKINSIT+DNCKK GLVFD+VVGIVE+INS+D+++QVMGKVPTISIN
Sbjct: 355 YIFKCNKSTLQMKGKINSITIDNCKKFGLVFDNVVGIVEVINSKDIQMQVMGKVPTISIN 414
Query: 1331 KTDGCHIYLSKNSLDCEIVSAKSSEMNVLIPTEGGDFNEFPVPEQFKTIWNGQKLVTTVT 1510
KT+GCHIYLS+++LDCEIVSAKSSEMNVLIP + GD+ EFPVPEQFKT+W+G KLVT
Sbjct: 415 KTEGCHIYLSEDALDCEIVSAKSSEMNVLIP-QDGDYREFPVPEQFKTVWDGSKLVTEPA 473
Query: 1511 EIAG 1522
EI G
Sbjct: 474 EIMG 477
>ref|XP_858447.1| PREDICTED: similar to adenylyl cyclase-associated protein 2 isoform 3
[Canis familiaris].
Length = 460
Score = 495 bits (1274), Expect = e-140
Identities = 266/454 (58%), Positives = 321/454 (70%), Gaps = 9/454 (1%)
Frame = +2
Query: 98 MADMQNLVERLERAVGRLEAVSHASDTHCGYGD----SAAKAGAAPYVQAFDSLLAGPVA 265
MA+MQ L+ERLER VGRLE +S +++H GD + G AP V+AFD L+ VA
Sbjct: 1 MAEMQGLMERLERVVGRLEVLS--AESHRPPGDFGEINGVNGGVAPSVEAFDKLMNSMVA 58
Query: 266 EYLKISKEIGGDVQKHAEMVHTGLKLEQALLVTASQCQQPVGNKLSELLAPISEQIQEVI 445
E+LK S+ + GDV+ HAEMVH+ + ++A L+ ASQ QQP N ++ LL PISE+IQE+
Sbjct: 59 EFLKKSRILAGDVETHAEMVHSAFQAQRAFLLMASQHQQPQENDVAALLKPISEKIQEIQ 118
Query: 446 TFREKNRGSKLFNHLSAVSESIQALGWVAMAPKPGPYVKEMNDAAMFYTNRVLKEYXXXX 625
TFRE+NRGSK+FNHLSAVSESI ALGW+A++PKPGPYVKEMNDAA FYTNRVLK+Y
Sbjct: 119 TFRERNRGSKMFNHLSAVSESIPALGWIAVSPKPGPYVKEMNDAATFYTNRVLKDYKHSD 178
Query: 626 XXXXXXXXAYLSIWTELQAYIKEFHTTGLAWSKTGPVAKELXXXXXXXXXXXXXXXXXXX 805
+YL+IW+ELQAYIKE HTTGL WSKTGPVA
Sbjct: 179 LRHVDWVKSYLNIWSELQAYIKEHHTTGLTWSKTGPVASTASALSVLSPGPGLPPPPPPP 238
Query: 806 XXXXXXXXXXXXXXXXXXX----ALFAQINQGESITHALKHVSDDMKTHKNPALKAQSGP 973
ALFAQ+NQGE IT L+HV+DD KTHKNP+L+A G
Sbjct: 239 PPPGPPPFFENEGRREESSPSRSALFAQLNQGEEITKGLRHVTDDQKTHKNPSLRAPGGQ 298
Query: 974 VRTGPKPFSASKPGI-SPSPKPVTKKEPALLELEGKKWRVENQENVSNLVIDDTELKQVA 1150
P P + PG +P P K P +LELEGKKWRVE QE ++LVI +TELKQVA
Sbjct: 299 T---PSPTKSHTPGSRAPQSHPPQKHAP-VLELEGKKWRVEYQEGRNDLVIAETELKQVA 354
Query: 1151 YIFKCVNSTLQIKGKINSITVDNCKKLGLVFDDVVGIVEIINSRDVKVQVMGKVPTISIN 1330
YIFKC STLQ+KGKINSIT+DNCKK GLVFD+VVGIVE+INS+D+++QVMGKVPTISIN
Sbjct: 355 YIFKCNKSTLQMKGKINSITIDNCKKFGLVFDNVVGIVEVINSKDIQMQVMGKVPTISIN 414
Query: 1331 KTDGCHIYLSKNSLDCEIVSAKSSEMNVLIPTEG 1432
KT+GCHIYLS+++LDCEIVSAKSSEMNVLIP +G
Sbjct: 415 KTEGCHIYLSEDALDCEIVSAKSSEMNVLIPQDG 448
>ref|XP_856592.1| PREDICTED: similar to CAP, adenylate cyclase-associated protein 1
isoform 6 [Canis familiaris].
Length = 326
Score = 462 bits (1190), Expect = e-130
Identities = 233/283 (82%), Positives = 242/283 (85%)
Frame = +2
Query: 674 LQAYIKEFHTTGLAWSKTGPVAKELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 853
LQAYIKEFHTTGLAWSKTGPVA+EL
Sbjct: 44 LQAYIKEFHTTGLAWSKTGPVAQELSGLPSGPSAGSGPPPPPPGPPPPPVPTSSGSDESA 103
Query: 854 XXXALFAQINQGESITHALKHVSDDMKTHKNPALKAQSGPVRTGPKPFSASKPGISPSPK 1033
ALFAQINQGESITHALKHVSDDMKTHKNPALKAQSGPVR+GPKPFSA KPG+SPSPK
Sbjct: 104 SRSALFAQINQGESITHALKHVSDDMKTHKNPALKAQSGPVRSGPKPFSAPKPGVSPSPK 163
Query: 1034 PVTKKEPALLELEGKKWRVENQENVSNLVIDDTELKQVAYIFKCVNSTLQIKGKINSITV 1213
P KKEPA+LELEGKKWRVENQENVSNLVIDDTELKQVAYI+KCVN+TLQIKGKINSITV
Sbjct: 164 PTAKKEPAVLELEGKKWRVENQENVSNLVIDDTELKQVAYIYKCVNTTLQIKGKINSITV 223
Query: 1214 DNCKKLGLVFDDVVGIVEIINSRDVKVQVMGKVPTISINKTDGCHIYLSKNSLDCEIVSA 1393
DNCKKLGLVFDDVVGIVEIINSRDVKVQVMGKVPTISINKTDGCH+YLSKNSLDCEIVSA
Sbjct: 224 DNCKKLGLVFDDVVGIVEIINSRDVKVQVMGKVPTISINKTDGCHVYLSKNSLDCEIVSA 283
Query: 1394 KSSEMNVLIPTEGGDFNEFPVPEQFKTIWNGQKLVTTVTEIAG 1522
KSSEMNVLIPTEGGD+NEFPVPEQFKT+WNGQKLVTTVTEIAG
Sbjct: 284 KSSEMNVLIPTEGGDYNEFPVPEQFKTLWNGQKLVTTVTEIAG 326
Score = 88.2 bits (217), Expect = 3e-17
Identities = 42/47 (89%), Positives = 44/47 (93%)
Frame = +2
Query: 98 MADMQNLVERLERAVGRLEAVSHASDTHCGYGDSAAKAGAAPYVQAF 238
MADMQ LVERLERAVGRLEAVSHASD HCGYGDSA KAGAAPY+QA+
Sbjct: 1 MADMQKLVERLERAVGRLEAVSHASDMHCGYGDSAPKAGAAPYLQAY 47
>ref|XP_856556.1| PREDICTED: similar to CAP, adenylate cyclase-associated protein 1
isoform 5 [Canis familiaris].
Length = 272
Score = 428 bits (1100), Expect = e-119
Identities = 209/220 (95%), Positives = 217/220 (98%)
Frame = +2
Query: 863 ALFAQINQGESITHALKHVSDDMKTHKNPALKAQSGPVRTGPKPFSASKPGISPSPKPVT 1042
ALFAQINQGESITHALKHVSDDMKTHKNPALKAQSGPVR+GPKPFSA KPG+SPSPKP
Sbjct: 53 ALFAQINQGESITHALKHVSDDMKTHKNPALKAQSGPVRSGPKPFSAPKPGVSPSPKPTA 112
Query: 1043 KKEPALLELEGKKWRVENQENVSNLVIDDTELKQVAYIFKCVNSTLQIKGKINSITVDNC 1222
KKEPA+LELEGKKWRVENQENVSNLVIDDTELKQVAYI+KCVN+TLQIKGKINSITVDNC
Sbjct: 113 KKEPAVLELEGKKWRVENQENVSNLVIDDTELKQVAYIYKCVNTTLQIKGKINSITVDNC 172
Query: 1223 KKLGLVFDDVVGIVEIINSRDVKVQVMGKVPTISINKTDGCHIYLSKNSLDCEIVSAKSS 1402
KKLGLVFDDVVGIVEIINSRDVKVQVMGKVPTISINKTDGCH+YLSKNSLDCEIVSAKSS
Sbjct: 173 KKLGLVFDDVVGIVEIINSRDVKVQVMGKVPTISINKTDGCHVYLSKNSLDCEIVSAKSS 232
Query: 1403 EMNVLIPTEGGDFNEFPVPEQFKTIWNGQKLVTTVTEIAG 1522
EMNVLIPTEGGD+NEFPVPEQFKT+WNGQKLVTTVTEIAG
Sbjct: 233 EMNVLIPTEGGDYNEFPVPEQFKTLWNGQKLVTTVTEIAG 272
>ref|XP_856509.1| PREDICTED: similar to CAP, adenylate cyclase-associated protein 1
isoform 4 [Canis familiaris].
Length = 218
Score = 401 bits (1030), Expect = e-111
Identities = 195/206 (94%), Positives = 203/206 (98%)
Frame = +2
Query: 905 ALKHVSDDMKTHKNPALKAQSGPVRTGPKPFSASKPGISPSPKPVTKKEPALLELEGKKW 1084
ALKHVSDDMKTHKNPALKAQSGPVR+GPKPFSA KPG+SPSPKP KKEPA+LELEGKKW
Sbjct: 13 ALKHVSDDMKTHKNPALKAQSGPVRSGPKPFSAPKPGVSPSPKPTAKKEPAVLELEGKKW 72
Query: 1085 RVENQENVSNLVIDDTELKQVAYIFKCVNSTLQIKGKINSITVDNCKKLGLVFDDVVGIV 1264
RVENQENVSNLVIDDTELKQVAYI+KCVN+TLQIKGKINSITVDNCKKLGLVFDDVVGIV
Sbjct: 73 RVENQENVSNLVIDDTELKQVAYIYKCVNTTLQIKGKINSITVDNCKKLGLVFDDVVGIV 132
Query: 1265 EIINSRDVKVQVMGKVPTISINKTDGCHIYLSKNSLDCEIVSAKSSEMNVLIPTEGGDFN 1444
EIINSRDVKVQVMGKVPTISINKTDGCH+YLSKNSLDCEIVSAKSSEMNVLIPTEGGD+N
Sbjct: 133 EIINSRDVKVQVMGKVPTISINKTDGCHVYLSKNSLDCEIVSAKSSEMNVLIPTEGGDYN 192
Query: 1445 EFPVPEQFKTIWNGQKLVTTVTEIAG 1522
EFPVPEQFKT+WNGQKLVTTVTEIAG
Sbjct: 193 EFPVPEQFKTLWNGQKLVTTVTEIAG 218
>ref|XP_856469.1| PREDICTED: similar to CAP, adenylate cyclase-associated protein 1
isoform 3 [Canis familiaris].
Length = 198
Score = 385 bits (989), Expect = e-106
Identities = 187/198 (94%), Positives = 195/198 (98%)
Frame = +2
Query: 929 MKTHKNPALKAQSGPVRTGPKPFSASKPGISPSPKPVTKKEPALLELEGKKWRVENQENV 1108
MKTHKNPALKAQSGPVR+GPKPFSA KPG+SPSPKP KKEPA+LELEGKKWRVENQENV
Sbjct: 1 MKTHKNPALKAQSGPVRSGPKPFSAPKPGVSPSPKPTAKKEPAVLELEGKKWRVENQENV 60
Query: 1109 SNLVIDDTELKQVAYIFKCVNSTLQIKGKINSITVDNCKKLGLVFDDVVGIVEIINSRDV 1288
SNLVIDDTELKQVAYI+KCVN+TLQIKGKINSITVDNCKKLGLVFDDVVGIVEIINSRDV
Sbjct: 61 SNLVIDDTELKQVAYIYKCVNTTLQIKGKINSITVDNCKKLGLVFDDVVGIVEIINSRDV 120
Query: 1289 KVQVMGKVPTISINKTDGCHIYLSKNSLDCEIVSAKSSEMNVLIPTEGGDFNEFPVPEQF 1468
KVQVMGKVPTISINKTDGCH+YLSKNSLDCEIVSAKSSEMNVLIPTEGGD+NEFPVPEQF
Sbjct: 121 KVQVMGKVPTISINKTDGCHVYLSKNSLDCEIVSAKSSEMNVLIPTEGGDYNEFPVPEQF 180
Query: 1469 KTIWNGQKLVTTVTEIAG 1522
KT+WNGQKLVTTVTEIAG
Sbjct: 181 KTLWNGQKLVTTVTEIAG 198
>ref|XP_858406.1| PREDICTED: similar to adenylyl cyclase-associated protein 2 isoform
2 [Canis familiaris].
Length = 82
Score = 61.6 bits (148), Expect = 3e-09
Identities = 35/73 (47%), Positives = 47/73 (64%), Gaps = 4/73 (5%)
Frame = +2
Query: 107 MQNLVERLERAVGRLEAVSHASDTHCGYGD----SAAKAGAAPYVQAFDSLLAGPVAEYL 274
MQ L+ERLER VGRLE +S +++H GD + G AP V+AFD L+ VAE+L
Sbjct: 1 MQGLMERLERVVGRLEVLS--AESHRPPGDFGEINGVNGGVAPSVEAFDKLMNSMVAEFL 58
Query: 275 KISKEIGGDVQKH 313
K S+ + GDV+ H
Sbjct: 59 KKSRILAGDVETH 71
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 95,764,393
Number of extensions: 2561630
Number of successful extensions: 8410
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 8286
Number of HSP's successfully gapped: 14
Length of query: 786
Length of database: 18,874,504
Length adjustment: 111
Effective length of query: 675
Effective length of database: 15,174,208
Effective search space: 10242590400
Effective search space used: 10242590400
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007220
(2360 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001099000.1| adenylyl cyclase-associated protein 1 [Homo ... 780 0.0
Alignment gi|NP_006358.1| adenylyl cyclase-associated protein 1 [Homo sap... 780 0.0
Alignment gi|NP_006357.1| adenylyl cyclase-associated protein 2 [Homo sap... 529 e-150
>ref|NP_001099000.1| adenylyl cyclase-associated protein 1 [Homo sapiens].
Length = 475
Score = 780 bits (2015), Expect = 0.0
Identities = 401/475 (84%), Positives = 412/475 (86%)
Frame = +2
Query: 98 MADMQNLVERLERAVGRLEAVSHASDTHCGYGDSAAKAGAAPYVQAFDSLLAGPVAEYLK 277
MADMQNLVERLERAVGRLEAVSH SD H GY DS +KAGAAPYVQAFDSLLAGPVAEYLK
Sbjct: 1 MADMQNLVERLERAVGRLEAVSHTSDMHRGYADSPSKAGAAPYVQAFDSLLAGPVAEYLK 60
Query: 278 ISKEIGGDVQKHAEMVHTGLKLEQALLVTASQCQQPVGNKLSELLAPISEQIQEVITFRE 457
ISKEIGGDVQKHAEMVHTGLKLE+ALLVTASQCQQP NKLS+LLAPISEQI+EVITFRE
Sbjct: 61 ISKEIGGDVQKHAEMVHTGLKLERALLVTASQCQQPAENKLSDLLAPISEQIKEVITFRE 120
Query: 458 KNRGSKLFNHLSAVSESIQALGWVAMAPKPGPYVKEMNDAAMFYTNRVLKEYXXXXXXXX 637
KNRGSKLFNHLSAVSESIQALGWVAMAPKPGPYVKEMNDAAMFYTNRVLKEY
Sbjct: 121 KNRGSKLFNHLSAVSESIQALGWVAMAPKPGPYVKEMNDAAMFYTNRVLKEYKDVDKKHV 180
Query: 638 XXXXAYLSIWTELQAYIKEFHTTGLAWSKTGPVAKELXXXXXXXXXXXXXXXXXXXXXXX 817
AYLSIWTELQAYIKEFHTTGLAWSKTGPVAKEL
Sbjct: 181 DWVKAYLSIWTELQAYIKEFHTTGLAWSKTGPVAKELSGLPSGPSAGSGPPPPPPGPPPP 240
Query: 818 XXXXXXXXXXXXXXXALFAQINQGESITHALKHVSDDMKTHKNPALKAQSGPVRTGPKPF 997
ALFAQINQGESITHALKHVSDDMKTHKNPALKAQSGPVR+GPKPF
Sbjct: 241 PVSTSSGSDESASRSALFAQINQGESITHALKHVSDDMKTHKNPALKAQSGPVRSGPKPF 300
Query: 998 SASKPGISPSPKPVTKKEPALLELEGKKWRVENQENVSNLVIDDTELKQVAYIFKCVNST 1177
SA KP SPSPK TKKEPA+LELEGKKWRVENQENVSNLVI+DTELKQVAYI+KCVN+T
Sbjct: 301 SAPKPQTSPSPKRATKKEPAVLELEGKKWRVENQENVSNLVIEDTELKQVAYIYKCVNTT 360
Query: 1178 LQIKGKINSITVDNCKKLGLVFDDVVGIVEIINSRDVKVQVMGKVPTISINKTDGCHIYL 1357
LQIKGKINSITVDNCKKLGLVFDDVVGIVEIINS+DVKVQVMGKVPTISINKTDGCH YL
Sbjct: 361 LQIKGKINSITVDNCKKLGLVFDDVVGIVEIINSKDVKVQVMGKVPTISINKTDGCHAYL 420
Query: 1358 SKNSLDCEIVSAKSSEMNVLIPTEGGDFNEFPVPEQFKTIWNGQKLVTTVTEIAG 1522
SKNSLDCEIVSAKSSEMNVLIPTEGGDFNEFPVPEQFKT+WNGQKLVTTVTEIAG
Sbjct: 421 SKNSLDCEIVSAKSSEMNVLIPTEGGDFNEFPVPEQFKTLWNGQKLVTTVTEIAG 475
>ref|NP_006358.1| adenylyl cyclase-associated protein 1 [Homo sapiens].
Length = 475
Score = 780 bits (2015), Expect = 0.0
Identities = 401/475 (84%), Positives = 412/475 (86%)
Frame = +2
Query: 98 MADMQNLVERLERAVGRLEAVSHASDTHCGYGDSAAKAGAAPYVQAFDSLLAGPVAEYLK 277
MADMQNLVERLERAVGRLEAVSH SD H GY DS +KAGAAPYVQAFDSLLAGPVAEYLK
Sbjct: 1 MADMQNLVERLERAVGRLEAVSHTSDMHRGYADSPSKAGAAPYVQAFDSLLAGPVAEYLK 60
Query: 278 ISKEIGGDVQKHAEMVHTGLKLEQALLVTASQCQQPVGNKLSELLAPISEQIQEVITFRE 457
ISKEIGGDVQKHAEMVHTGLKLE+ALLVTASQCQQP NKLS+LLAPISEQI+EVITFRE
Sbjct: 61 ISKEIGGDVQKHAEMVHTGLKLERALLVTASQCQQPAENKLSDLLAPISEQIKEVITFRE 120
Query: 458 KNRGSKLFNHLSAVSESIQALGWVAMAPKPGPYVKEMNDAAMFYTNRVLKEYXXXXXXXX 637
KNRGSKLFNHLSAVSESIQALGWVAMAPKPGPYVKEMNDAAMFYTNRVLKEY
Sbjct: 121 KNRGSKLFNHLSAVSESIQALGWVAMAPKPGPYVKEMNDAAMFYTNRVLKEYKDVDKKHV 180
Query: 638 XXXXAYLSIWTELQAYIKEFHTTGLAWSKTGPVAKELXXXXXXXXXXXXXXXXXXXXXXX 817
AYLSIWTELQAYIKEFHTTGLAWSKTGPVAKEL
Sbjct: 181 DWVKAYLSIWTELQAYIKEFHTTGLAWSKTGPVAKELSGLPSGPSAGSGPPPPPPGPPPP 240
Query: 818 XXXXXXXXXXXXXXXALFAQINQGESITHALKHVSDDMKTHKNPALKAQSGPVRTGPKPF 997
ALFAQINQGESITHALKHVSDDMKTHKNPALKAQSGPVR+GPKPF
Sbjct: 241 PVSTSSGSDESASRSALFAQINQGESITHALKHVSDDMKTHKNPALKAQSGPVRSGPKPF 300
Query: 998 SASKPGISPSPKPVTKKEPALLELEGKKWRVENQENVSNLVIDDTELKQVAYIFKCVNST 1177
SA KP SPSPK TKKEPA+LELEGKKWRVENQENVSNLVI+DTELKQVAYI+KCVN+T
Sbjct: 301 SAPKPQTSPSPKRATKKEPAVLELEGKKWRVENQENVSNLVIEDTELKQVAYIYKCVNTT 360
Query: 1178 LQIKGKINSITVDNCKKLGLVFDDVVGIVEIINSRDVKVQVMGKVPTISINKTDGCHIYL 1357
LQIKGKINSITVDNCKKLGLVFDDVVGIVEIINS+DVKVQVMGKVPTISINKTDGCH YL
Sbjct: 361 LQIKGKINSITVDNCKKLGLVFDDVVGIVEIINSKDVKVQVMGKVPTISINKTDGCHAYL 420
Query: 1358 SKNSLDCEIVSAKSSEMNVLIPTEGGDFNEFPVPEQFKTIWNGQKLVTTVTEIAG 1522
SKNSLDCEIVSAKSSEMNVLIPTEGGDFNEFPVPEQFKT+WNGQKLVTTVTEIAG
Sbjct: 421 SKNSLDCEIVSAKSSEMNVLIPTEGGDFNEFPVPEQFKTLWNGQKLVTTVTEIAG 475
>ref|NP_006357.1| adenylyl cyclase-associated protein 2 [Homo sapiens].
Length = 477
Score = 529 bits (1363), Expect = e-150
Identities = 280/480 (58%), Positives = 345/480 (71%), Gaps = 7/480 (1%)
Frame = +2
Query: 98 MADMQNLVERLERAVGRLEAVS---HASDTHCGYGDSAAKAGAAPYVQAFDSLLAGPVAE 268
MA+MQ LVERLERAV RLE++S H +CG + AG AP V+AFD L+ VAE
Sbjct: 1 MANMQGLVERLERAVSRLESLSAESHRPPGNCGEVNGVI-AGVAPSVEAFDKLMDSMVAE 59
Query: 269 YLKISKEIGGDVQKHAEMVHTGLKLEQALLVTASQCQQPVGNKLSELLAPISEQIQEVIT 448
+LK S+ + GDV+ HAEMVH+ + ++A L+ ASQ QQP N ++ LL PISE+IQE+ T
Sbjct: 60 FLKNSRILAGDVETHAEMVHSAFQAQRAFLLMASQYQQPHENDVAALLKPISEKIQEIQT 119
Query: 449 FREKNRGSKLFNHLSAVSESIQALGWVAMAPKPGPYVKEMNDAAMFYTNRVLKEYXXXXX 628
FRE+NRGS +FNHLSAVSESI ALGW+A++PKPGPYVKEMNDAA FYTNRVLK+Y
Sbjct: 120 FRERNRGSNMFNHLSAVSESIPALGWIAVSPKPGPYVKEMNDAATFYTNRVLKDYKHSDL 179
Query: 629 XXXXXXXAYLSIWTELQAYIKEFHTTGLAWSKTGPVAKELXXXXXXXXXXXXXXXXXXXX 808
+YL+IW+ELQAYIKE HTTGL WSKTGPVA +
Sbjct: 180 RHVDWVKSYLNIWSELQAYIKEHHTTGLTWSKTGPVASTVSAFSVLSSGPGLPPPPPPLP 239
Query: 809 XXXXXXXXXXXXXXXXXX----ALFAQINQGESITHALKHVSDDMKTHKNPALKAQSGPV 976
ALFAQ+NQGE+IT L+HV+DD KT+KNP+L+AQ G
Sbjct: 240 PPGPPPLFENEGKKEESSPSRSALFAQLNQGEAITKGLRHVTDDQKTYKNPSLRAQGGQT 299
Query: 977 RTGPKPFSASKPGISPSPKPVTKKEPALLELEGKKWRVENQENVSNLVIDDTELKQVAYI 1156
++ K + S SP P K P +LELEGKKWRVE QE+ ++LVI +TELKQVAYI
Sbjct: 300 QSPTKSHTPSPT--SPKSYPSQKHAP-VLELEGKKWRVEYQEDRNDLVISETELKQVAYI 356
Query: 1157 FKCVNSTLQIKGKINSITVDNCKKLGLVFDDVVGIVEIINSRDVKVQVMGKVPTISINKT 1336
FKC ST+QIKGK+NSI +DNCKKLGLVFD+VVGIVE+INS+D+++QVMG+VPTISINKT
Sbjct: 357 FKCEKSTIQIKGKVNSIIIDNCKKLGLVFDNVVGIVEVINSQDIQIQVMGRVPTISINKT 416
Query: 1337 DGCHIYLSKNSLDCEIVSAKSSEMNVLIPTEGGDFNEFPVPEQFKTIWNGQKLVTTVTEI 1516
+GCHIYLS+++LDCEIVSAKSSEMN+LIP + GD+ EFP+PEQFKT W+G KL+T EI
Sbjct: 417 EGCHIYLSEDALDCEIVSAKSSEMNILIP-QDGDYREFPIPEQFKTAWDGSKLITEPAEI 475
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 94,332,432
Number of extensions: 2550262
Number of successful extensions: 8099
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 8027
Number of HSP's successfully gapped: 4
Length of query: 786
Length of database: 18,297,164
Length adjustment: 111
Effective length of query: 675
Effective length of database: 14,638,160
Effective search space: 9880758000
Effective search space used: 9880758000
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007220
(2360 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_031624.2| adenylyl cyclase-associated protein 1 [Mus musc... 779 0.0
Alignment gi|NP_080332.1| adenylyl cyclase-associated protein 2 [Mus musc... 513 e-145
>ref|NP_031624.2| adenylyl cyclase-associated protein 1 [Mus musculus].
Length = 474
Score = 779 bits (2012), Expect = 0.0
Identities = 400/475 (84%), Positives = 410/475 (86%)
Frame = +2
Query: 98 MADMQNLVERLERAVGRLEAVSHASDTHCGYGDSAAKAGAAPYVQAFDSLLAGPVAEYLK 277
MADMQNLVERLERAVGRLEAVSH SD HCGYGDS +K GA PYVQAFDSLLA PVAEYLK
Sbjct: 1 MADMQNLVERLERAVGRLEAVSHTSDMHCGYGDSPSK-GAVPYVQAFDSLLANPVAEYLK 59
Query: 278 ISKEIGGDVQKHAEMVHTGLKLEQALLVTASQCQQPVGNKLSELLAPISEQIQEVITFRE 457
+SKEIGGDVQKHAEMVHTGLKLE+ALL TASQCQQP GNKLS+LLAPISEQIQEVITFRE
Sbjct: 60 MSKEIGGDVQKHAEMVHTGLKLERALLATASQCQQPAGNKLSDLLAPISEQIQEVITFRE 119
Query: 458 KNRGSKLFNHLSAVSESIQALGWVAMAPKPGPYVKEMNDAAMFYTNRVLKEYXXXXXXXX 637
KNRGSK FNHLSAVSESIQALGWVA+A KPGP+VKEMNDAAMFYTNRVLKEY
Sbjct: 120 KNRGSKFFNHLSAVSESIQALGWVALAAKPGPFVKEMNDAAMFYTNRVLKEYRDVDKKHV 179
Query: 638 XXXXAYLSIWTELQAYIKEFHTTGLAWSKTGPVAKELXXXXXXXXXXXXXXXXXXXXXXX 817
AYLSIWTELQAYIKEFHTTGLAWSKTGPVAKEL
Sbjct: 180 DWVRAYLSIWTELQAYIKEFHTTGLAWSKTGPVAKELSGLPSGPSVGSGPPPPPPGPPPP 239
Query: 818 XXXXXXXXXXXXXXXALFAQINQGESITHALKHVSDDMKTHKNPALKAQSGPVRTGPKPF 997
ALFAQINQGESITHALKHVSDDMKTHKNPALKAQSGPVR+GPKPF
Sbjct: 240 PISTSSGSDDSASRSALFAQINQGESITHALKHVSDDMKTHKNPALKAQSGPVRSGPKPF 299
Query: 998 SASKPGISPSPKPVTKKEPALLELEGKKWRVENQENVSNLVIDDTELKQVAYIFKCVNST 1177
SA KP SPSPKP TKKEPALLELEGKKWRVENQENVSNLVIDDTELKQVAYI+KCVN+T
Sbjct: 300 SAPKPQTSPSPKPATKKEPALLELEGKKWRVENQENVSNLVIDDTELKQVAYIYKCVNTT 359
Query: 1178 LQIKGKINSITVDNCKKLGLVFDDVVGIVEIINSRDVKVQVMGKVPTISINKTDGCHIYL 1357
LQIKGKINSITVDNCKKLGLVFDDVVGIVEIINSRDVKVQVMGKVPTISINKTDGCH YL
Sbjct: 360 LQIKGKINSITVDNCKKLGLVFDDVVGIVEIINSRDVKVQVMGKVPTISINKTDGCHAYL 419
Query: 1358 SKNSLDCEIVSAKSSEMNVLIPTEGGDFNEFPVPEQFKTIWNGQKLVTTVTEIAG 1522
SKNSLDCEIVSAKSSEMNVLIPTEGGDFNEFPVPEQFKT+WNGQKLVTTVTEIAG
Sbjct: 420 SKNSLDCEIVSAKSSEMNVLIPTEGGDFNEFPVPEQFKTLWNGQKLVTTVTEIAG 474
>ref|NP_080332.1| adenylyl cyclase-associated protein 2 [Mus musculus].
Length = 476
Score = 513 bits (1321), Expect = e-145
Identities = 277/479 (57%), Positives = 338/479 (70%), Gaps = 6/479 (1%)
Frame = +2
Query: 98 MADMQNLVERLERAVGRLEAVSHASD-THCGYGD-SAAKAGAAPYVQAFDSLLAGPVAEY 271
M DM L+ERLERAV RLE +S D G G+ + G AP V+AFD L+ VAE+
Sbjct: 1 MTDMAGLMERLERAVIRLEQLSAGLDGPPRGCGEVNGVNGGVAPSVEAFDKLINSMVAEF 60
Query: 272 LKISKEIGGDVQKHAEMVHTGLKLEQALLVTASQCQQPVGNKLSELLAPISEQIQEVITF 451
LK S+ + GDV+ HAEMVH + ++A L+ SQ QQP N+++ LL PISE+IQE+ TF
Sbjct: 61 LKNSRVLAGDVETHAEMVHGAFQAQRAFLLMVSQYQQPQENEVAVLLKPISEKIQEIQTF 120
Query: 452 REKNRGSKLFNHLSAVSESIQALGWVAMAPKPGPYVKEMNDAAMFYTNRVLKEYXXXXXX 631
RE+NRGS +FNHLSAVSESI ALGW+A++PKPGPYVKEMNDAA FYTNRVLK+Y
Sbjct: 121 RERNRGSNMFNHLSAVSESIAALGWIAVSPKPGPYVKEMNDAATFYTNRVLKDYKHSDLR 180
Query: 632 XXXXXXAYLSIWTELQAYIKEFHTTGLAWSKTGPVAKELXXXXXXXXXXXXXXXXXXXXX 811
+YL+IW+ELQAYI+E HTTGL WSKTGPVA
Sbjct: 181 HVDWVRSYLNIWSELQAYIREHHTTGLTWSKTGPVASTASAFSILSSGPGLPPPPPPPPP 240
Query: 812 XXXXXXXXXXXXXXXXX----ALFAQINQGESITHALKHVSDDMKTHKNPALKAQSGPVR 979
ALFAQ+NQGE+IT L+HV+DD KT+KNP+L+AQ G +R
Sbjct: 241 PGPPPPFENEDKKEEPSPSRSALFAQLNQGEAITKGLRHVTDDKKTYKNPSLRAQ-GQIR 299
Query: 980 TGPKPFSASKPGISPSPKPVTKKEPALLELEGKKWRVENQENVSNLVIDDTELKQVAYIF 1159
+ K + S SP K P +LELEGKKWRVE QE+ ++LVI +TELKQVAYIF
Sbjct: 300 SPTKTHTPSPT--SPKSNSPQKHTP-VLELEGKKWRVEYQEDRNDLVISETELKQVAYIF 356
Query: 1160 KCVNSTLQIKGKINSITVDNCKKLGLVFDDVVGIVEIINSRDVKVQVMGKVPTISINKTD 1339
KC STLQIKGK+NSITVDNCKK GLVFD VVGIVE+INS+D+++QVMG+VPTISINKT+
Sbjct: 357 KCDKSTLQIKGKVNSITVDNCKKFGLVFDHVVGIVEVINSKDIQIQVMGRVPTISINKTE 416
Query: 1340 GCHIYLSKNSLDCEIVSAKSSEMNVLIPTEGGDFNEFPVPEQFKTIWNGQKLVTTVTEI 1516
GCH+YLS+++LDCEIVSAKSSEMNVL+P + D+ EFP+PEQFKTIW+G KLVT EI
Sbjct: 417 GCHLYLSEDALDCEIVSAKSSEMNVLVP-QDDDYREFPIPEQFKTIWDGSKLVTEPAEI 474
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 80,320,450
Number of extensions: 2157391
Number of successful extensions: 6647
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 6597
Number of HSP's successfully gapped: 3
Length of query: 786
Length of database: 15,617,559
Length adjustment: 109
Effective length of query: 677
Effective length of database: 12,343,635
Effective search space: 8356640895
Effective search space used: 8356640895
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007220
(2360 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_003127872.2| PREDICTED: zinc finger protein Rlf-like, par... 632 0.0
Alignment gi|XP_003356378.1| PREDICTED: adenylyl cyclase-associated prote... 441 e-124
Alignment gi|XP_003127870.1| PREDICTED: adenylyl cyclase-associated prote... 331 1e-90
Alignment gi|XP_003361634.1| PREDICTED: adenylyl cyclase-associated prote... 221 1e-57
Alignment gi|XP_003128236.2| PREDICTED: adenylyl cyclase-associated prote... 219 4e-57
>ref|XP_003127872.2| PREDICTED: zinc finger protein Rlf-like, partial [Sus scrofa].
Length = 1526
Score = 632 bits (1630), Expect = 0.0
Identities = 326/376 (86%), Positives = 326/376 (86%)
Frame = +2
Query: 395 KLSELLAPISEQIQEVITFREKNRGSKLFNHLSAVSESIQALGWVAMAPKPGPYVKEMND 574
KLSELLAPISEQIQEVITFREKNRGSKLFNHLSAVSESIQALGWVAMAPKPGPYVKEMND
Sbjct: 1151 KLSELLAPISEQIQEVITFREKNRGSKLFNHLSAVSESIQALGWVAMAPKPGPYVKEMND 1210
Query: 575 AAMFYTNRVLKEYXXXXXXXXXXXXAYLSIWTELQAYIKEFHTTGLAWSKTGPVAKELXX 754
AAMFYTNRVLKEY AYLSIWTELQAYIKEFHTTGLAWSKTGPVAKEL
Sbjct: 1211 AAMFYTNRVLKEYKDVDKKHVDWVKAYLSIWTELQAYIKEFHTTGLAWSKTGPVAKELSG 1270
Query: 755 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALFAQINQGESITHALKHVSDDMK 934
ALFAQINQGESITHALKHVSDDMK
Sbjct: 1271 LPSGPSAGSGPPPPPPGPPPPPVPTSSGSDESASRSALFAQINQGESITHALKHVSDDMK 1330
Query: 935 THKNPALKAQSGPVRTGPKPFSASKPGISPSPKPVTKKEPALLELEGKKWRVENQENVSN 1114
THKNPALKAQSGPVRTGPKPFSASKPGISPSPKPVTKKEPALLELEGKKWRVENQENVSN
Sbjct: 1331 THKNPALKAQSGPVRTGPKPFSASKPGISPSPKPVTKKEPALLELEGKKWRVENQENVSN 1390
Query: 1115 LVIDDTELKQVAYIFKCVNSTLQIKGKINSITVDNCKKLGLVFDDVVGIVEIINSRDVKV 1294
LVIDDTELKQVAYIFKCVNSTLQIKGKINSITVDNCKKLGLVFDDVVGIVEIINSRDVKV
Sbjct: 1391 LVIDDTELKQVAYIFKCVNSTLQIKGKINSITVDNCKKLGLVFDDVVGIVEIINSRDVKV 1450
Query: 1295 QVMGKVPTISINKTDGCHIYLSKNSLDCEIVSAKSSEMNVLIPTEGGDFNEFPVPEQFKT 1474
QVMGKVPTISINKTDGCHIYLSKNSLDCEIVSAKSSEMNVLIPTEGGDFNEFPVPEQFKT
Sbjct: 1451 QVMGKVPTISINKTDGCHIYLSKNSLDCEIVSAKSSEMNVLIPTEGGDFNEFPVPEQFKT 1510
Query: 1475 IWNGQKLVTTVTEIAG 1522
IWNGQKLVTTVTEIAG
Sbjct: 1511 IWNGQKLVTTVTEIAG 1526
>ref|XP_003356378.1| PREDICTED: adenylyl cyclase-associated protein 1-like [Sus scrofa].
Length = 294
Score = 441 bits (1134), Expect = e-124
Identities = 220/220 (100%), Positives = 220/220 (100%)
Frame = +2
Query: 863 ALFAQINQGESITHALKHVSDDMKTHKNPALKAQSGPVRTGPKPFSASKPGISPSPKPVT 1042
ALFAQINQGESITHALKHVSDDMKTHKNPALKAQSGPVRTGPKPFSASKPGISPSPKPVT
Sbjct: 75 ALFAQINQGESITHALKHVSDDMKTHKNPALKAQSGPVRTGPKPFSASKPGISPSPKPVT 134
Query: 1043 KKEPALLELEGKKWRVENQENVSNLVIDDTELKQVAYIFKCVNSTLQIKGKINSITVDNC 1222
KKEPALLELEGKKWRVENQENVSNLVIDDTELKQVAYIFKCVNSTLQIKGKINSITVDNC
Sbjct: 135 KKEPALLELEGKKWRVENQENVSNLVIDDTELKQVAYIFKCVNSTLQIKGKINSITVDNC 194
Query: 1223 KKLGLVFDDVVGIVEIINSRDVKVQVMGKVPTISINKTDGCHIYLSKNSLDCEIVSAKSS 1402
KKLGLVFDDVVGIVEIINSRDVKVQVMGKVPTISINKTDGCHIYLSKNSLDCEIVSAKSS
Sbjct: 195 KKLGLVFDDVVGIVEIINSRDVKVQVMGKVPTISINKTDGCHIYLSKNSLDCEIVSAKSS 254
Query: 1403 EMNVLIPTEGGDFNEFPVPEQFKTIWNGQKLVTTVTEIAG 1522
EMNVLIPTEGGDFNEFPVPEQFKTIWNGQKLVTTVTEIAG
Sbjct: 255 EMNVLIPTEGGDFNEFPVPEQFKTIWNGQKLVTTVTEIAG 294
>ref|XP_003127870.1| PREDICTED: adenylyl cyclase-associated protein 1-like [Sus scrofa].
Length = 173
Score = 331 bits (849), Expect = 1e-90
Identities = 170/172 (98%), Positives = 170/172 (98%)
Frame = +2
Query: 98 MADMQNLVERLERAVGRLEAVSHASDTHCGYGDSAAKAGAAPYVQAFDSLLAGPVAEYLK 277
MADMQNLVERLERAVGRLEAVSHASDTHCGYGDSAAKAGAAPYVQAFDSLLAGPVAEYLK
Sbjct: 1 MADMQNLVERLERAVGRLEAVSHASDTHCGYGDSAAKAGAAPYVQAFDSLLAGPVAEYLK 60
Query: 278 ISKEIGGDVQKHAEMVHTGLKLEQALLVTASQCQQPVGNKLSELLAPISEQIQEVITFRE 457
ISKEIGGDVQKHAEMVHTGLKLEQALLVTASQCQQP NKLSELLAPISEQIQEVITFRE
Sbjct: 61 ISKEIGGDVQKHAEMVHTGLKLEQALLVTASQCQQP--NKLSELLAPISEQIQEVITFRE 118
Query: 458 KNRGSKLFNHLSAVSESIQALGWVAMAPKPGPYVKEMNDAAMFYTNRVLKEY 613
KNRGSKLFNHLSAVSESIQALGWVAMAPKPGPYVKEMNDAAMFYTNRVLKEY
Sbjct: 119 KNRGSKLFNHLSAVSESIQALGWVAMAPKPGPYVKEMNDAAMFYTNRVLKEY 170
>ref|XP_003361634.1| PREDICTED: adenylyl cyclase-associated protein 2-like, partial [Sus
scrofa].
Length = 283
Score = 221 bits (563), Expect = 1e-57
Identities = 109/149 (73%), Positives = 130/149 (87%), Gaps = 1/149 (0%)
Frame = +2
Query: 1073 GKKW-RVENQENVSNLVIDDTELKQVAYIFKCVNSTLQIKGKINSITVDNCKKLGLVFDD 1249
G W + E QE+ ++LVI +TEL+QVAYIFKC STLQIKGKINSI VDNCKK GLVFD+
Sbjct: 125 GLTWSKTEYQEDRNDLVISETELRQVAYIFKCNKSTLQIKGKINSIIVDNCKKFGLVFDN 184
Query: 1250 VVGIVEIINSRDVKVQVMGKVPTISINKTDGCHIYLSKNSLDCEIVSAKSSEMNVLIPTE 1429
VGIVE+INS+D+++QVMGKVPTISINKT+GCHIYLS+++LDC+IVSAKSSEMN+LIP +
Sbjct: 185 AVGIVEVINSKDIQMQVMGKVPTISINKTEGCHIYLSEDALDCDIVSAKSSEMNILIPRD 244
Query: 1430 GGDFNEFPVPEQFKTIWNGQKLVTTVTEI 1516
GD+ EFPVPEQFKT W+G KLVT TEI
Sbjct: 245 -GDYREFPVPEQFKTAWDGSKLVTEPTEI 272
Score = 167 bits (422), Expect = 3e-41
Identities = 82/125 (65%), Positives = 97/125 (77%)
Frame = +2
Query: 353 LLVTASQCQQPVGNKLSELLAPISEQIQEVITFREKNRGSKLFNHLSAVSESIQALGWVA 532
L+ + C Q N ++ LL PISE+IQE+ TFRE+NRGSK+FNHLSAVSESI ALGW+A
Sbjct: 10 LVTVPNVCLQ---NDVAALLKPISEKIQEIQTFRERNRGSKMFNHLSAVSESIPALGWIA 66
Query: 533 MAPKPGPYVKEMNDAAMFYTNRVLKEYXXXXXXXXXXXXAYLSIWTELQAYIKEFHTTGL 712
++PKPGPYVKEMNDAA FYTNRVLK+Y +YL+IW+ELQAYIKE HTTGL
Sbjct: 67 VSPKPGPYVKEMNDAATFYTNRVLKDYKHSDLRHVDWVKSYLNIWSELQAYIKEHHTTGL 126
Query: 713 AWSKT 727
WSKT
Sbjct: 127 TWSKT 131
>ref|XP_003128236.2| PREDICTED: adenylyl cyclase-associated protein 2, partial [Sus
scrofa].
Length = 152
Score = 219 bits (559), Expect = 4e-57
Identities = 107/142 (75%), Positives = 127/142 (89%)
Frame = +2
Query: 1091 ENQENVSNLVIDDTELKQVAYIFKCVNSTLQIKGKINSITVDNCKKLGLVFDDVVGIVEI 1270
E QE+ ++LVI +TEL+QVAYIFKC STLQIKGKINSI VDNCKK GLVFD+ VGIVE+
Sbjct: 1 EYQEDRNDLVISETELRQVAYIFKCNKSTLQIKGKINSIIVDNCKKFGLVFDNAVGIVEV 60
Query: 1271 INSRDVKVQVMGKVPTISINKTDGCHIYLSKNSLDCEIVSAKSSEMNVLIPTEGGDFNEF 1450
INS+D+++QVMGKVPTISINKT+GCHIYLS+++LDC+IVSAKSSEMN+LIP + GD+ EF
Sbjct: 61 INSKDIQMQVMGKVPTISINKTEGCHIYLSEDALDCDIVSAKSSEMNILIPRD-GDYREF 119
Query: 1451 PVPEQFKTIWNGQKLVTTVTEI 1516
PVPEQFKT W+G KLVT TEI
Sbjct: 120 PVPEQFKTAWDGSKLVTEPTEI 141
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 59,218,153
Number of extensions: 1602354
Number of successful extensions: 5135
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 5110
Number of HSP's successfully gapped: 6
Length of query: 786
Length of database: 11,343,932
Length adjustment: 107
Effective length of query: 679
Effective length of database: 8,679,953
Effective search space: 5893688087
Effective search space used: 5893688087
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007220
(2360 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr06 1600 0.0
gb|GL894875.2| Sus scrofa unplaced genomic scaffold ChrUScaf2759 64 4e-07
Sscrofa_Chr07 64 4e-07
>Sscrofa_Chr06
|| Length = 157765593
Score = 1600 bits (807), Expect = 0.0
Identities = 898/925 (97%), Gaps = 6/925 (0%)
Strand = Plus / Minus
Query: 1442 aatgagttcccagtccctgagcagttcaagaccatatggaatgggcagaagttggtcacc 1501
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89301991 aatgagttcccagtccctgagcagttcaagaccatatggaatgggcagaagttggtcacc 89301932
Query: 1502 acagtgacagaaattgctggataagcgaagtgccactgggttctttgccctctccctcac 1561
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89301931 acagtgacagaaattgctggataagcgaagtgccactgggttctttgccctctccctcac 89301872
Query: 1562 accgtgggataaatctgtatcaagatggttcttttctagatttcctctacctttctgctc 1621
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89301871 accgtgggataaatctgtatcaagatggttcttttctagatttcctctacctttctgctc 89301812
Query: 1622 ttaaatgcttctctgctttgagaagcacagctacctgccttcactgaaatatacctcagg 1681
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89301811 ttaaatgcttctctgctttgagaagcacagctacctgccttcactgaaatatacctcagg 89301752
Query: 1682 ctgagatttggggtgggatagcaggtcacttgatcttcagcaggaaggggcagcttttcc 1741
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89301751 ctgagatttggggtgggatagcaggtcacttgatcttcagcaggaaggggcagcttttcc 89301692
Query: 1742 ttgtcagctcaaccacaccgcccgtccattcttaaggaaccatagaccaggaccgggtat 1801
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89301691 ttgtcagctcaaccacaccgcccgtccattcttaaggaaccatagaccaggaccgggtat 89301632
Query: 1802 gttttagctttcggcctttggggttatttgaccaacaaagtcttttgggaagaaaaaaga 1861
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 89301631 gttttagctttcggcctttggggttatttgaccaacagagtcttttgggaagaaaaaaga 89301572
Query: 1862 aacagtccccaggaattaacagatcagaacattcacaccaagttaatctttctctaacag 1921
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89301571 aacagtccccaggaattaacagatcagaacattcacaccaagttaatctttctctaacag 89301512
Query: 1922 tgagcatgaaggtagcagaagctggtgtgattctagctggttctttttacttaaactaat 1981
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89301511 tgagcatgaaggtagcagaagctggtgtgattctagctggttctttttacttaaactaat 89301452
Query: 1982 tttcactgttgacaagttaaggcgagggttgcacaggaccaaaggctgaagcttggccat 2041
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89301451 tttcactgttgacaagttaaggcgagggttgcacaggaccaaaggctgaagcttggccat 89301392
Query: 2042 ctagcattccaagcaaaatgatttcctacaagcattcctttccttctgcattccatcctg 2101
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89301391 ctagcattccaagcaaaatgatttcctacaagcattcctttccttctgcattccatcctg 89301332
Query: 2102 cgtctgcccgaagcccagatcataggttctcctgtgttagctgctgtggcggtgccctgt 2161
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89301331 cgtctgcccgaagcccagatcataggttctcctgtgttagctgctgtggcggtgccctgt 89301272
Query: 2162 acacaggccagctgaaggagtcttggaccctttctctctctggggcccctgcctagcacc 2221
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89301271 acacaggccagctgaaggagtcttggaccctttctctctctggggcccctgcctagcacc 89301212
Query: 2222 ttcctacagagatgatttttaa-gnnnnnnnnnnnnnnaagaaaaccacaccattccaag 2280
||||||||||||||||||| || | ||||||||||||||||||| ||
Sbjct: 89301211 ttcctacagagatgattttaaaggagagagagagagaaaagaaaaccacaccattcccag 89301152
Query: 2281 g-atctgggcttccttt-cttcatgctaggtgcccttcct-caacttcgctgcctccttt 2337
| |||||| | ||||| |||||||||||||||||||||| || ||||||||||||||||
Sbjct: 89301151 gaatctggcttccctttccttcatgctaggtgcccttcctccatcttcgctgcctccttt 89301092
Query: 2338 g-cccgtcatgctc-acagcttttg 2360
| |||||||||||| ||||||||||
Sbjct: 89301091 gccccgtcatgctcaacagcttttg 89301067
Score = 1592 bits (803), Expect = 0.0
Identities = 897/925 (96%), Gaps = 6/925 (0%)
Strand = Plus / Minus
Query: 1442 aatgagttcccagtccctgagcagttcaagaccatatggaatgggcagaagttggtcacc 1501
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89123757 aatgagttcccagtccctgagcagttcaagaccatatggaatgggcagaagttggtcacc 89123698
Query: 1502 acagtgacagaaattgctggataagcgaagtgccactgggttctttgccctctccctcac 1561
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89123697 acagtgacagaaattgctggataagcgaagtgccactgggttctttgccctctccctcac 89123638
Query: 1562 accgtgggataaatctgtatcaagatggttcttttctagatttcctctacctttctgctc 1621
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89123637 accgtgggataaatctgtatcaagatggttcttttctagatttcctctacctttctgctc 89123578
Query: 1622 ttaaatgcttctctgctttgagaagcacagctacctgccttcactgaaatatacctcagg 1681
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89123577 ttaaatgcttctctgctttgagaagcacagctacctgccttcactgaaatatacctcagg 89123518
Query: 1682 ctgagatttggggtgggatagcaggtcacttgatcttcagcaggaaggggcagcttttcc 1741
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89123517 ctgagatttggggtgggatagcaggtcacttgatcttcagcaggaaggggcagcttttcc 89123458
Query: 1742 ttgtcagctcaaccacaccgcccgtccattcttaaggaaccatagaccaggaccgggtat 1801
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89123457 ttgtcagctcaaccacaccgcccgtccattcttaaggaaccatagaccaggaccgggtat 89123398
Query: 1802 gttttagctttcggcctttggggttatttgaccaacaaagtcttttgggaagaaaaaaga 1861
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 89123397 gttttagctttcggcctttggggttatttgaccaacagagtcttttgggaagaaaaaaga 89123338
Query: 1862 aacagtccccaggaattaacagatcagaacattcacaccaagttaatctttctctaacag 1921
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89123337 aacagtccccaggaattaacagatcagaacattcacaccaagttaatctttctctaacag 89123278
Query: 1922 tgagcatgaaggtagcagaagctggtgtgattctagctggttctttttacttaaactaat 1981
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89123277 tgagcatgaaggtagcagaagctggtgtgattctagctggttctttttacttaaactaat 89123218
Query: 1982 tttcactgttgacaagttaaggcgagggttgcacaggaccaaaggctgaagcttggccat 2041
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 89123217 tttcactgttgacaagttaaggcgagggttgcacaggaccaaaggctgaaacttggccat 89123158
Query: 2042 ctagcattccaagcaaaatgatttcctacaagcattcctttccttctgcattccatcctg 2101
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89123157 ctagcattccaagcaaaatgatttcctacaagcattcctttccttctgcattccatcctg 89123098
Query: 2102 cgtctgcccgaagcccagatcataggttctcctgtgttagctgctgtggcggtgccctgt 2161
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89123097 cgtctgcccgaagcccagatcataggttctcctgtgttagctgctgtggcggtgccctgt 89123038
Query: 2162 acacaggccagctgaaggagtcttggaccctttctctctctggggcccctgcctagcacc 2221
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89123037 acacaggccagctgaaggagtcttggaccctttctctctctggggcccctgcctagcacc 89122978
Query: 2222 ttcctacagagatgatttttaa-gnnnnnnnnnnnnnnaagaaaaccacaccattccaag 2280
||||||||||||||||||| || | ||||||||||||||||||| ||
Sbjct: 89122977 ttcctacagagatgattttaaaggagagagagagagaaaagaaaaccacaccattcccag 89122918
Query: 2281 g-atctgggcttccttt-cttcatgctaggtgcccttcct-caacttcgctgcctccttt 2337
| |||||| | ||||| |||||||||||||||||||||| || ||||||||||||||||
Sbjct: 89122917 gaatctggcttccctttccttcatgctaggtgcccttcctccatcttcgctgcctccttt 89122858
Query: 2338 g-cccgtcatgctc-acagcttttg 2360
| |||||||||||| ||||||||||
Sbjct: 89122857 gccccgtcatgctcaacagcttttg 89122833
Score = 371 bits (187), Expect = 1e-99
Identities = 187/187 (100%)
Strand = Plus / Minus
Query: 905 gccctgaaacacgtatccgatgacatgaagactcacaagaaccctgctttgaaggctcag 964
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89125791 gccctgaaacacgtatccgatgacatgaagactcacaagaaccctgctttgaaggctcag 89125732
Query: 965 agtgggcccgtacgaactggccccaaaccattctctgcatctaaacctggaatcagccca 1024
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89125731 agtgggcccgtacgaactggccccaaaccattctctgcatctaaacctggaatcagccca 89125672
Query: 1025 tcccccaaaccagtcacaaagaaggagccagctctacttgaactggagggcaagaagtgg 1084
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89125671 tcccccaaaccagtcacaaagaaggagccagctctacttgaactggagggcaagaagtgg 89125612
Query: 1085 agagtgg 1091
|||||||
Sbjct: 89125611 agagtgg 89125605
Score = 371 bits (187), Expect = 1e-99
Identities = 187/187 (100%)
Strand = Plus / Minus
Query: 905 gccctgaaacacgtatccgatgacatgaagactcacaagaaccctgctttgaaggctcag 964
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89304025 gccctgaaacacgtatccgatgacatgaagactcacaagaaccctgctttgaaggctcag 89303966
Query: 965 agtgggcccgtacgaactggccccaaaccattctctgcatctaaacctggaatcagccca 1024
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89303965 agtgggcccgtacgaactggccccaaaccattctctgcatctaaacctggaatcagccca 89303906
Query: 1025 tcccccaaaccagtcacaaagaaggagccagctctacttgaactggagggcaagaagtgg 1084
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89303905 tcccccaaaccagtcacaaagaaggagccagctctacttgaactggagggcaagaagtgg 89303846
Query: 1085 agagtgg 1091
|||||||
Sbjct: 89303845 agagtgg 89303839
Score = 355 bits (179), Expect = 7e-95
Identities = 179/179 (100%)
Strand = Plus / Minus
Query: 727 ggggcccgtggctaaagaactgagtggattgccatctggaccctctgctggatcaggtcc 786
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89306288 ggggcccgtggctaaagaactgagtggattgccatctggaccctctgctggatcaggtcc 89306229
Query: 787 tcctcctcctccaccaggcccacctccgcccccagtccccaccagttcaggctcagatga 846
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89306228 tcctcctcctccaccaggcccacctccgcccccagtccccaccagttcaggctcagatga 89306169
Query: 847 gtctgcctcacgctcagcactgtttgcgcagattaatcaaggggagagcatcacacacg 905
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89306168 gtctgcctcacgctcagcactgtttgcgcagattaatcaaggggagagcatcacacacg 89306110
Score = 347 bits (175), Expect = 2e-92
Identities = 178/179 (99%)
Strand = Plus / Minus
Query: 727 ggggcccgtggctaaagaactgagtggattgccatctggaccctctgctggatcaggtcc 786
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89128048 ggggcccgtggctaaagaactgagtggattgccatctggaccctctgctggatcaggtcc 89127989
Query: 787 tcctcctcctccaccaggcccacctccgcccccagtccccaccagttcaggctcagatga 846
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 89127988 tcctcctcctccaccaggcccacctcctcccccagtccccaccagttcaggctcagatga 89127929
Query: 847 gtctgcctcacgctcagcactgtttgcgcagattaatcaaggggagagcatcacacacg 905
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89127928 gtctgcctcacgctcagcactgtttgcgcagattaatcaaggggagagcatcacacacg 89127870
Score = 291 bits (147), Expect = 9e-76
Identities = 147/147 (100%)
Strand = Plus / Minus
Query: 1295 caggtaatgggtaaagtgccaaccatttcgatcaacaaaacagacggctgccacatttac 1354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89124754 caggtaatgggtaaagtgccaaccatttcgatcaacaaaacagacggctgccacatttac 89124695
Query: 1355 ctgagcaagaattccctggattgtgagatagtcagtgccaaatcttctgagatgaatgtc 1414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89124694 ctgagcaagaattccctggattgtgagatagtcagtgccaaatcttctgagatgaatgtc 89124635
Query: 1415 ctcattcctacagaaggcggtgacttc 1441
|||||||||||||||||||||||||||
Sbjct: 89124634 ctcattcctacagaaggcggtgacttc 89124608
Score = 291 bits (147), Expect = 9e-76
Identities = 147/147 (100%)
Strand = Plus / Minus
Query: 1295 caggtaatgggtaaagtgccaaccatttcgatcaacaaaacagacggctgccacatttac 1354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89302988 caggtaatgggtaaagtgccaaccatttcgatcaacaaaacagacggctgccacatttac 89302929
Query: 1355 ctgagcaagaattccctggattgtgagatagtcagtgccaaatcttctgagatgaatgtc 1414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89302928 ctgagcaagaattccctggattgtgagatagtcagtgccaaatcttctgagatgaatgtc 89302869
Query: 1415 ctcattcctacagaaggcggtgacttc 1441
|||||||||||||||||||||||||||
Sbjct: 89302868 ctcattcctacagaaggcggtgacttc 89302842
Score = 287 bits (145), Expect = 1e-74
Identities = 145/145 (100%)
Strand = Plus / Plus
Query: 392 aataagctttctgaattgttggcacccatctccgagcagatccaagaagtaataaccttt 451
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89023930 aataagctttctgaattgttggcacccatctccgagcagatccaagaagtaataaccttt 89023989
Query: 452 cgggagaagaaccgaggcagcaagttgttcaatcacctgtcagctgtcagtgaaagcatc 511
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89023990 cgggagaagaaccgaggcagcaagttgttcaatcacctgtcagctgtcagtgaaagcatc 89024049
Query: 512 caggccctgggttgggtggctatgg 536
|||||||||||||||||||||||||
Sbjct: 89024050 caggccctgggttgggtggctatgg 89024074
Score = 281 bits (142), Expect = 9e-73
Identities = 142/142 (100%)
Strand = Plus / Minus
Query: 395 aagctttctgaattgttggcacccatctccgagcagatccaagaagtaataacctttcgg 454
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89309905 aagctttctgaattgttggcacccatctccgagcagatccaagaagtaataacctttcgg 89309846
Query: 455 gagaagaaccgaggcagcaagttgttcaatcacctgtcagctgtcagtgaaagcatccag 514
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89309845 gagaagaaccgaggcagcaagttgttcaatcacctgtcagctgtcagtgaaagcatccag 89309786
Query: 515 gccctgggttgggtggctatgg 536
||||||||||||||||||||||
Sbjct: 89309785 gccctgggttgggtggctatgg 89309764
Score = 248 bits (125), Expect = 1e-62
Identities = 125/125 (100%)
Strand = Plus / Minus
Query: 1090 ggaaaatcaggagaatgtttccaacctggtgatagatgacacagagctgaaacaggtggc 1149
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89125417 ggaaaatcaggagaatgtttccaacctggtgatagatgacacagagctgaaacaggtggc 89125358
Query: 1150 ttacatattcaagtgcgtcaactcgacattgcaaatcaagggcaaaattaactccattac 1209
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89125357 ttacatattcaagtgcgtcaactcgacattgcaaatcaagggcaaaattaactccattac 89125298
Query: 1210 agtag 1214
|||||
Sbjct: 89125297 agtag 89125293
Score = 248 bits (125), Expect = 1e-62
Identities = 125/125 (100%)
Strand = Plus / Minus
Query: 1090 ggaaaatcaggagaatgtttccaacctggtgatagatgacacagagctgaaacaggtggc 1149
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89303651 ggaaaatcaggagaatgtttccaacctggtgatagatgacacagagctgaaacaggtggc 89303592
Query: 1150 ttacatattcaagtgcgtcaactcgacattgcaaatcaagggcaaaattaactccattac 1209
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89303591 ttacatattcaagtgcgtcaactcgacattgcaaatcaagggcaaaattaactccattac 89303532
Query: 1210 agtag 1214
|||||
Sbjct: 89303531 agtag 89303527
Score = 246 bits (124), Expect = 5e-62
Identities = 124/124 (100%)
Strand = Plus / Plus
Query: 86 aggtggtacattatggctgacatgcaaaatctggtagaaagattggagagagcagtgggc 145
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89018687 aggtggtacattatggctgacatgcaaaatctggtagaaagattggagagagcagtgggc 89018746
Query: 146 cgcctggaggcagtctcccatgcctctgacacacactgtggatatggagacagtgctgca 205
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89018747 cgcctggaggcagtctcccatgcctctgacacacactgtggatatggagacagtgctgca 89018806
Query: 206 aaag 209
||||
Sbjct: 89018807 aaag 89018810
Score = 212 bits (107), Expect = 7e-52
Identities = 107/107 (100%)
Strand = Plus / Plus
Query: 208 agcaggagcagctccgtatgtgcaagcatttgactcactgctggccggtcctgtggcgga 267
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89019710 agcaggagcagctccgtatgtgcaagcatttgactcactgctggccggtcctgtggcgga 89019769
Query: 268 atacctcaagatcagtaaagagattgggggagatgtgcagaaacatg 314
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89019770 atacctcaagatcagtaaagagattgggggagatgtgcagaaacatg 89019816
Score = 212 bits (107), Expect = 7e-52
Identities = 107/107 (100%)
Strand = Plus / Minus
Query: 622 ggataagaagcacgtggactgggtcaaagcttacttgagtatatggacagagctgcaggc 681
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89307703 ggataagaagcacgtggactgggtcaaagcttacttgagtatatggacagagctgcaggc 89307644
Query: 682 ttacattaaggagttccatacgactggactggcctggagcaaaacgg 728
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89307643 ttacattaaggagttccatacgactggactggcctggagcaaaacgg 89307597
Score = 178 bits (90), Expect = 9e-42
Identities = 90/90 (100%)
Strand = Plus / Minus
Query: 1212 tagataactgtaagaaactcggtctggtgttcgatgacgtggtgggcattgtggagataa 1271
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89125153 tagataactgtaagaaactcggtctggtgttcgatgacgtggtgggcattgtggagataa 89125094
Query: 1272 tcaatagtcgggatgtcaaagttcaggtaa 1301
||||||||||||||||||||||||||||||
Sbjct: 89125093 tcaatagtcgggatgtcaaagttcaggtaa 89125064
Score = 178 bits (90), Expect = 9e-42
Identities = 90/90 (100%)
Strand = Plus / Minus
Query: 1212 tagataactgtaagaaactcggtctggtgttcgatgacgtggtgggcattgtggagataa 1271
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89303387 tagataactgtaagaaactcggtctggtgttcgatgacgtggtgggcattgtggagataa 89303328
Query: 1272 tcaatagtcgggatgtcaaagttcaggtaa 1301
||||||||||||||||||||||||||||||
Sbjct: 89303327 tcaatagtcgggatgtcaaagttcaggtaa 89303298
Score = 176 bits (89), Expect = 4e-41
Identities = 89/89 (100%)
Strand = Plus / Plus
Query: 2 ggaagtgggtcgcgcgaagattgctgggcggttcttgccggaagtggagagcggctgatc 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89004593 ggaagtgggtcgcgcgaagattgctgggcggttcttgccggaagtggagagcggctgatc 89004652
Query: 62 gcagtcccgaggtgaggaactctgaggtg 90
|||||||||||||||||||||||||||||
Sbjct: 89004653 gcagtcccgaggtgaggaactctgaggtg 89004681
Score = 174 bits (88), Expect = 1e-40
Identities = 88/88 (100%)
Strand = Plus / Plus
Query: 535 ggctcccaagcctggtccctatgtgaaggaaatgaatgatgctgccatgttttatacaaa 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89024174 ggctcccaagcctggtccctatgtgaaggaaatgaatgatgctgccatgttttatacaaa 89024233
Query: 595 ccgagtcctcaaggagtacaaagatgtg 622
||||||||||||||||||||||||||||
Sbjct: 89024234 ccgagtcctcaaggagtacaaagatgtg 89024261
Score = 174 bits (88), Expect = 1e-40
Identities = 88/88 (100%)
Strand = Plus / Minus
Query: 535 ggctcccaagcctggtccctatgtgaaggaaatgaatgatgctgccatgttttatacaaa 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89309664 ggctcccaagcctggtccctatgtgaaggaaatgaatgatgctgccatgttttatacaaa 89309605
Query: 595 ccgagtcctcaaggagtacaaagatgtg 622
||||||||||||||||||||||||||||
Sbjct: 89309604 ccgagtcctcaaggagtacaaagatgtg 89309577
Score = 155 bits (78), Expect = 1e-34
Identities = 78/78 (100%)
Strand = Plus / Plus
Query: 314 gcggaaatggtccatacaggtctgaagttggagcaagctctcttggttacagcctctcag 373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89021556 gcggaaatggtccatacaggtctgaagttggagcaagctctcttggttacagcctctcag 89021615
Query: 374 tgccagcagcctgtaggt 391
||||||||||||||||||
Sbjct: 89021616 tgccagcagcctgtaggt 89021633
>gb|GL894875.2| Sus scrofa unplaced genomic scaffold ChrUScaf2759
Length = 42002
Score = 63.9 bits (32), Expect = 4e-07
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 1293 ttcaggtaatgggtaaagtgccaaccatttcgatcaacaaaacagacggctgccacattt 1352
||||||||||||| ||||||||||| ||||| || || || ||||| ||||||||||| |
Sbjct: 35571 ttcaggtaatggggaaagtgccaacaatttccattaataagacagaaggctgccacatat 35630
Query: 1353 acct 1356
||||
Sbjct: 35631 acct 35634
>Sscrofa_Chr07
|| Length = 134764511
Score = 63.9 bits (32), Expect = 4e-07
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 1293 ttcaggtaatgggtaaagtgccaaccatttcgatcaacaaaacagacggctgccacattt 1352
||||||||||||| ||||||||||| ||||| || || || ||||| ||||||||||| |
Sbjct: 14048225 ttcaggtaatggggaaagtgccaacaatttccattaataagacagaaggctgccacatat 14048284
Query: 1353 acct 1356
||||
Sbjct: 14048285 acct 14048288
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 73,479,526
Number of extensions: 532
Number of successful extensions: 532
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 528
Number of HSP's successfully gapped: 25
Length of query: 2360
Length of database: 2,808,509,378
Length adjustment: 22
Effective length of query: 2338
Effective length of database: 2,808,408,574
Effective search space: 6566059246012
Effective search space used: 6566059246012
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)