Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007228
(1535 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001103265.1| alpha-2-macroglobulin [Bos taurus]. 754 0.0
Alignment gi|XP_002687891.1| PREDICTED: pregnancy-zone protein-like [Bos ... 658 0.0
Alignment gi|XP_583329.4| PREDICTED: Alpha-2-macroglobulin-like, partial ... 658 0.0
Alignment gi|XP_002687862.1| PREDICTED: alpha-2-macroglobulin-like 1 [Bos... 438 e-123
Alignment gi|NP_001157496.1| ovostatin 2 [Bos taurus]. 370 e-102
Alignment gi|NP_001178230.1| alpha-2-macroglobulin-like protein 1 [Bos ta... 338 6e-93
Alignment gi|XP_002688595.1| PREDICTED: C3 and PZP-like, alpha-2-macroglo... 271 1e-72
Alignment gi|XP_609516.3| PREDICTED: C3 and PZP-like, alpha-2-macroglobul... 271 1e-72
Alignment gi|XP_002690068.1| PREDICTED: thiolester containing protein II-... 240 2e-63
Alignment gi|XP_613667.3| PREDICTED: thiolester containing protein II-lik... 240 2e-63
>ref|NP_001103265.1| alpha-2-macroglobulin [Bos taurus].
Length = 1510
Score = 754 bits (1948), Expect = 0.0
Identities = 380/476 (79%), Positives = 419/476 (88%), Gaps = 1/476 (0%)
Frame = +1
Query: 28 AGASEQLSLKLPPNVVEDSARAFFSVLGDLLGSAMRNTQNLLQMPYGCGEQNMVLFAPNI 207
A SE LSLKLPPNVVE+SARA FSVLGD+LGSAMRNTQNLLQMPYGCGEQNM FAPNI
Sbjct: 962 AKVSESLSLKLPPNVVEESARASFSVLGDILGSAMRNTQNLLQMPYGCGEQNMARFAPNI 1021
Query: 208 YVLDYLNETQQLTAEIKSKAIRYLNTGYQRQLLYKHYDGSYSTFGEHYGRSEGNTWLTAF 387
YVLDYLNETQQLTAE+KSKAI YLNTGYQRQLLYKH+DGSYSTFGEH G SEGNTWLTAF
Sbjct: 1022 YVLDYLNETQQLTAELKSKAILYLNTGYQRQLLYKHFDGSYSTFGEHRGNSEGNTWLTAF 1081
Query: 388 VMKTFAQARTYIFIDETHITEALTWLSQKQKDNGCFRSSGSLLNNAIKGGVDDEVTLSAY 567
V+K+FAQAR YIFIDE HITEALTWL+QKQK NGCFRS+G+LLNNAIKGGVDDEVTLSAY
Sbjct: 1082 VLKSFAQARGYIFIDEAHITEALTWLAQKQKSNGCFRSTGTLLNNAIKGGVDDEVTLSAY 1141
Query: 568 VTIALLEIPLAVTHPVVRSALFCLETAWKSAQEGSQGSHVYTKALLAYAFALAGNQEKKK 747
+TIALLE+PL VTHPVVR+ALFCL++AWKSA+EGSQGSHVYTKALLAYAFALAGNQE++
Sbjct: 1142 ITIALLEMPLPVTHPVVRNALFCLDSAWKSAKEGSQGSHVYTKALLAYAFALAGNQERRT 1201
Query: 748 EVLQSLDAEAVKEGDSIHWTRPQKPEAPVQHFYKPRAPSAEVEMTAYVLLTCLTAQSALS 927
EVL SL EAVKE ++IHWTRPQKP + Y+PRAPSAEVEMTAYV+L +TAQ A +
Sbjct: 1202 EVLTSLYEEAVKEDNTIHWTRPQKPRLLTEDIYQPRAPSAEVEMTAYVILAHVTAQPAPN 1261
Query: 928 SEDLNLATLIMKWITKQQNSQGGFSSTQDTVVALHALSKYGAATFTRTGKAAEVTIQSTG 1107
EDL AT I+KWI+KQQN QGGFSSTQDTVVALHALS+YGAATFT KAA+VTIQS+G
Sbjct: 1262 PEDLKRATSIVKWISKQQNCQGGFSSTQDTVVALHALSRYGAATFTSARKAAQVTIQSSG 1321
Query: 1108 TFSKKFXXXXXXXXXXXXISLPAVPGEYSITATGKGCVYLQTSLKYNILPKKEDFPFALE 1287
TFS KF +SLP VPGEYS++ TG+GCVYLQTSLKYNILPKK++FPFALE
Sbjct: 1322 TFSTKFQVENSNRLLLQQVSLPEVPGEYSMSVTGEGCVYLQTSLKYNILPKKDEFPFALE 1381
Query: 1288 VQTLPPTCE-PKAHTSFQISVNVSYTGSRPASNMAIVDVKMVSGFIPLKPQ*KCLK 1452
VQTLP TC+ PKAHTSFQIS++VSY GSRPASNMAIVDVKMVSGFIPLKP K L+
Sbjct: 1382 VQTLPQTCDGPKAHTSFQISLSVSYIGSRPASNMAIVDVKMVSGFIPLKPTVKMLE 1437
>ref|XP_002687891.1| PREDICTED: pregnancy-zone protein-like [Bos taurus].
Length = 1424
Score = 658 bits (1697), Expect = 0.0
Identities = 335/489 (68%), Positives = 401/489 (82%), Gaps = 3/489 (0%)
Frame = +1
Query: 1 FNSLLCPSDAGASEQLSLKLPPNVVEDSARAFFSVLGDLLGSAMRNTQNLLQMPYGCGEQ 180
FN+LLC S+ G SE+LSLKLP NVVE SARA +SVLGD+LGSAM+N QNLL+MPYGCGEQ
Sbjct: 864 FNTLLCASETGGSEKLSLKLPSNVVEGSARATYSVLGDILGSAMQNLQNLLRMPYGCGEQ 923
Query: 181 NMVLFAPNIYVLDYLNETQQLTAEIKSKAIRYLNTGYQRQLLYKHYDGSYSTFGEHYGRS 360
NMVLF PNIYVL+YLNET QLT +IKSKAI YL +GYQRQL YKH DGSYSTFG+ GRS
Sbjct: 924 NMVLFTPNIYVLNYLNETGQLTEKIKSKAISYLISGYQRQLNYKHSDGSYSTFGDRDGRS 983
Query: 361 EGNTWLTAFVMKTFAQARTYIFIDETHITEALTWLSQKQKDNGCFRSSGSLLNNAIKGGV 540
+GNTWLTAFV+K+F+QA+++IF++++HIT++LTWLS+KQK+NGCF+ SGSLLNNAIKGGV
Sbjct: 984 QGNTWLTAFVLKSFSQAQSHIFVEDSHITDSLTWLSRKQKENGCFQRSGSLLNNAIKGGV 1043
Query: 541 DDEVTLSAYVTIALLEIPLAVTHPVVRSALFCLETAWKSAQEGSQGSHVYTKALLAYAFA 720
DDEVTLSAY+TIALLE+PL VTH +VR+ALFCLE AW+SA E +QGS VYTKALLAYAFA
Sbjct: 1044 DDEVTLSAYITIALLEMPLLVTHSIVRNALFCLERAWQSASE-AQGSFVYTKALLAYAFA 1102
Query: 721 LAGNQEKKKEVLQSLDAEAVKEGDSIHWTRPQKPEAPVQHFYKP-RAPSAEVEMTAYVLL 897
LAG+Q K+ E+L+SL EAVKE DSIHW RP+KP+ V Y P RAPS +VEMT+Y LL
Sbjct: 1103 LAGDQAKRNELLESLHKEAVKEEDSIHWQRPRKPQ-EVNELYSPHRAPSVDVEMTSYCLL 1161
Query: 898 TCLTAQSALSSEDLNLATLIMKWITKQQNSQGGFSSTQDTVVALHALSKYGAATFTRTGK 1077
LTAQ A SSEDL++AT I+KW+TKQQN GGFSSTQDTVVAL ALSKYGAATF + K
Sbjct: 1162 AHLTAQPAPSSEDLSVATQIVKWLTKQQNPNGGFSSTQDTVVALQALSKYGAATFIKGEK 1221
Query: 1078 AAEVTIQSTGTFSKKFXXXXXXXXXXXXISLPAVPGEYSITATGKGCVYLQTSLKYNILP 1257
AA VT++S GTFS++F ++LP +PG+YS TG GCVY+QTSL+YNILP
Sbjct: 1222 AATVTVKSAGTFSEEFQVDEAKRLLLQEVALPEIPGKYSTAVTGSGCVYIQTSLRYNILP 1281
Query: 1258 KKE-DFPFALEVQTLPPTCE-PKAHTSFQISVNVSYTGSRPASNMAIVDVKMVSGFIPLK 1431
KKE PF L+V+TLP C+ H QI VN+SYTG RP+SNM IVDVKMVSGFIP+K
Sbjct: 1282 KKEGKAPFTLKVETLPKNCDGVSTHRKVQIHVNISYTGERPSSNMVIVDVKMVSGFIPVK 1341
Query: 1432 PQ*KCLKDL 1458
+ L+++
Sbjct: 1342 SSVRKLQEM 1350
>ref|XP_583329.4| PREDICTED: Alpha-2-macroglobulin-like, partial [Bos taurus].
Length = 999
Score = 658 bits (1697), Expect = 0.0
Identities = 335/489 (68%), Positives = 401/489 (82%), Gaps = 3/489 (0%)
Frame = +1
Query: 1 FNSLLCPSDAGASEQLSLKLPPNVVEDSARAFFSVLGDLLGSAMRNTQNLLQMPYGCGEQ 180
FN+LLC S+ G SE+LSLKLP NVVE SARA +SVLGD+LGSAM+N QNLL+MPYGCGEQ
Sbjct: 439 FNTLLCASETGGSEKLSLKLPSNVVEGSARATYSVLGDILGSAMQNLQNLLRMPYGCGEQ 498
Query: 181 NMVLFAPNIYVLDYLNETQQLTAEIKSKAIRYLNTGYQRQLLYKHYDGSYSTFGEHYGRS 360
NMVLF PNIYVL+YLNET QLT +IKSKAI YL +GYQRQL YKH DGSYSTFG+ GRS
Sbjct: 499 NMVLFTPNIYVLNYLNETGQLTEKIKSKAISYLISGYQRQLNYKHSDGSYSTFGDRDGRS 558
Query: 361 EGNTWLTAFVMKTFAQARTYIFIDETHITEALTWLSQKQKDNGCFRSSGSLLNNAIKGGV 540
+GNTWLTAFV+K+F+QA+++IF++++HIT++LTWLS+KQK+NGCF+ SGSLLNNAIKGGV
Sbjct: 559 QGNTWLTAFVLKSFSQAQSHIFVEDSHITDSLTWLSRKQKENGCFQRSGSLLNNAIKGGV 618
Query: 541 DDEVTLSAYVTIALLEIPLAVTHPVVRSALFCLETAWKSAQEGSQGSHVYTKALLAYAFA 720
DDEVTLSAY+TIALLE+PL VTH +VR+ALFCLE AW+SA E +QGS VYTKALLAYAFA
Sbjct: 619 DDEVTLSAYITIALLEMPLLVTHSIVRNALFCLERAWQSASE-AQGSFVYTKALLAYAFA 677
Query: 721 LAGNQEKKKEVLQSLDAEAVKEGDSIHWTRPQKPEAPVQHFYKP-RAPSAEVEMTAYVLL 897
LAG+Q K+ E+L+SL EAVKE DSIHW RP+KP+ V Y P RAPS +VEMT+Y LL
Sbjct: 678 LAGDQAKRNELLESLHKEAVKEEDSIHWQRPRKPQ-EVNELYSPHRAPSVDVEMTSYCLL 736
Query: 898 TCLTAQSALSSEDLNLATLIMKWITKQQNSQGGFSSTQDTVVALHALSKYGAATFTRTGK 1077
LTAQ A SSEDL++AT I+KW+TKQQN GGFSSTQDTVVAL ALSKYGAATF + K
Sbjct: 737 AHLTAQPAPSSEDLSVATQIVKWLTKQQNPNGGFSSTQDTVVALQALSKYGAATFIKGEK 796
Query: 1078 AAEVTIQSTGTFSKKFXXXXXXXXXXXXISLPAVPGEYSITATGKGCVYLQTSLKYNILP 1257
AA VT++S GTFS++F ++LP +PG+YS TG GCVY+QTSL+YNILP
Sbjct: 797 AATVTVKSAGTFSEEFQVDEAKRLLLQEVALPEIPGKYSTAVTGSGCVYIQTSLRYNILP 856
Query: 1258 KKE-DFPFALEVQTLPPTCE-PKAHTSFQISVNVSYTGSRPASNMAIVDVKMVSGFIPLK 1431
KKE PF L+V+TLP C+ H QI VN+SYTG RP+SNM IVDVKMVSGFIP+K
Sbjct: 857 KKEGKAPFTLKVETLPKNCDGVSTHRKVQIHVNISYTGERPSSNMVIVDVKMVSGFIPVK 916
Query: 1432 PQ*KCLKDL 1458
+ L+++
Sbjct: 917 SSVRKLQEM 925
>ref|XP_002687862.1| PREDICTED: alpha-2-macroglobulin-like 1 [Bos taurus].
Length = 1456
Score = 438 bits (1127), Expect = e-123
Identities = 232/479 (48%), Positives = 322/479 (67%), Gaps = 3/479 (0%)
Frame = +1
Query: 4 NSLLCPSDAGASEQLSLKLPPNVVEDSARAFFSVLGDLLGSAMRNTQNLLQMPYGCGEQN 183
+SLLCP ASE +SL++P +VV DSARA+ +VLGD++G+A++N NL+QMP GCGEQN
Sbjct: 917 SSLLCPKGKVASESISLEVPVDVVPDSARAYVAVLGDIMGTALQNLDNLVQMPRGCGEQN 976
Query: 184 MVLFAPNIYVLDYLNETQQLTAEIKSKAIRYLNTGYQRQLLYKHYDGSYSTFGEHYGRSE 363
MVLFAP IYVL YL +T+ LT EI S+A+ +L GYQR+L+YKH +GSYS FGE G
Sbjct: 977 MVLFAPIIYVLQYLEKTELLTEEIWSRAVGFLKLGYQRELMYKHSNGSYSAFGEQDG--N 1034
Query: 364 GNTWLTAFVMKTFAQARTYIFIDETHITEALTWLSQKQKDNGCFRSSGSLLNNAIKGGVD 543
GNTWLTAFV K F QAR +IFID+ +I +AL W++ Q +GC+ + G LL ++KGGVD
Sbjct: 1035 GNTWLTAFVTKCFGQARQFIFIDDKNIQDALEWMAGNQLSSGCYDNVGKLLQTSMKGGVD 1094
Query: 544 DEVTLSAYVTIALLEIPLAVTHPVVRSALFCLETAWKSAQEGSQGSHVYTKALLAYAFAL 723
DEV+L+AY+T ALLE+ + P+V L C++++ S +++YT+ALLAY F+L
Sbjct: 1095 DEVSLTAYITAALLEMGKTIDDPMVSQGLQCVKSSVSST------TNLYTQALLAYTFSL 1148
Query: 724 AGNQEKKKEVLQSLDAEAVKEGDSIHWTRPQKPEAPVQHFYKPRAPSAEVEMTAYVLLTC 903
AGN + +L+ LD +A+ G+S HW++ P + + +P A +VE+TAYVLLT
Sbjct: 1149 AGNMNIRNILLEKLDQQAIVSGESTHWSQKPAPTSDTSPWSQPEA--VDVELTAYVLLT- 1205
Query: 904 LTAQSALSSEDLNLATLIMKWITKQQNSQGGFSSTQDTVVALHALSKYGAATFTRTGKAA 1083
L ++ L+ ++L AT I+ W+TKQQN+ GGFSSTQDTVVAL AL+KY + +
Sbjct: 1206 LLSKDDLTQKELGKATSIVAWLTKQQNAYGGFSSTQDTVVALQALAKYATTAYV-PSEQV 1264
Query: 1084 EVTIQSTGTFSKKFXXXXXXXXXXXXISLPAVPGEYSITATGKGCVYLQTSLKYNILPKK 1263
+ ++S F F LP +PG Y++ A+GKGC+Y QT L+YNILP K
Sbjct: 1265 NLAVKSAQNFQHTFNVQAANRLVFQQEMLPHIPGVYTLEASGKGCIYAQTVLRYNILPPK 1324
Query: 1264 EDFPFALEVQTLPPTCEPKAHT---SFQISVNVSYTGSRPASNMAIVDVKMVSGFIPLK 1431
F+L V+T C K HT S +++ SY GSR +SNMAIV+VKM+SGF P++
Sbjct: 1325 SLEAFSLSVKTTGSQC--KQHTSLGSLVLTIQTSYVGSRSSSNMAIVEVKMLSGFSPVE 1381
>ref|NP_001157496.1| ovostatin 2 [Bos taurus].
Length = 1451
Score = 370 bits (950), Expect = e-102
Identities = 200/474 (42%), Positives = 291/474 (61%), Gaps = 1/474 (0%)
Frame = +1
Query: 10 LLCPSDAGASEQLSLKLPPNVVEDSARAFFSVLGDLLGSAMRNTQNLLQMPYGCGEQNMV 189
L+C S Q+ L L +VVE S RAFF+V+GD+LG A++N +NL QMPYG GEQN+
Sbjct: 913 LICTQGTKVSRQVDLNLTNDVVEGSTRAFFTVVGDILGLAIQNLENLFQMPYGGGEQNIA 972
Query: 190 LFAPNIYVLDYLNETQQLTAEIKSKAIRYLNTGYQRQLLYKHYDGSYSTFGEHYGRSEGN 369
L A N Y+LDYL T+QLT E+KSKA+ +L+ GYQ+QL +K+ DGSYS F + EG+
Sbjct: 973 LLASNTYILDYLKSTKQLTEEVKSKALFFLSNGYQKQLSFKNLDGSYSLFWQR--NQEGS 1030
Query: 370 TWLTAFVMKTFAQARTYIFIDETHITEALTWLSQKQKDNGCFRSSGSLLNNAIKGGVDDE 549
L+A KTFA + Y+FIDE E L WL+ KQK +GCF+S G L +NA + G +++
Sbjct: 1031 IRLSALTFKTFAGMKKYVFIDELVQRETLIWLASKQKIDGCFKSDGKLFSNAWEVGDEED 1090
Query: 550 VTLSAYVTIALLEIPLAVTHPVVRSALFCLETAWKSAQEGSQGSHVYTKALLAYAFALAG 729
V L+AY+ A LE L T P +R+ LFCLE A ++ Y A+LAYAFALAG
Sbjct: 1091 VVLTAYIVAAFLEAGLNFTFPALRNGLFCLEEALENGVRNG-----YNLAVLAYAFALAG 1145
Query: 730 NQEKKKEVLQSLDAEAVKEGDSIHWTRPQKPEAPVQHFYKPRAPSAEVEMTAYVLLTCLT 909
+EK + +L++LD A K + I+W + +K + + P APSAE+E T YVLL ++
Sbjct: 1146 KEEKVESLLRTLDQSATKLNNVIYWGKAKKLKTEASPLFIPWAPSAEIEKTCYVLLAIIS 1205
Query: 910 AQSALSSEDLNLATLIMKWITKQQNSQGGFSSTQDTVVALHALSKYGAATFTRTGKAAEV 1089
+ + DL A+ I++W+ +Q NS GGFSS QDT V L A+++Y F+ +V
Sbjct: 1206 QK----NPDLTYASKIVQWLAQQMNSHGGFSSPQDTPVCLLAITRYMNLIFSDD----QV 1257
Query: 1090 TIQ-STGTFSKKFXXXXXXXXXXXXISLPAVPGEYSITATGKGCVYLQTSLKYNILPKKE 1266
T+ S+ F+K F L G+Y++ G+GC ++Q ++KYN+L K+
Sbjct: 1258 TVSLSSEEFNKIFQVNGDNHLLVQRSELTKAGGQYTVDVEGRGCAFIQATMKYNVLLPKK 1317
Query: 1267 DFPFALEVQTLPPTCEPKAHTSFQISVNVSYTGSRPASNMAIVDVKMVSGFIPL 1428
+ F+L +Q + ++F ++V + YTG+ SNM +VDVKM+SGF P+
Sbjct: 1318 ESGFSLSLQIVKKNSSDVFQSNFDLTVTLRYTGTHSNSNMVLVDVKMLSGFTPV 1371
>ref|NP_001178230.1| alpha-2-macroglobulin-like protein 1 [Bos taurus].
Length = 1396
Score = 338 bits (868), Expect = 6e-93
Identities = 204/479 (42%), Positives = 280/479 (58%), Gaps = 3/479 (0%)
Frame = +1
Query: 4 NSLLCPSDAGASEQLSLKLPPNVVEDSARAFFSVLGDLLGSAMRNTQNLLQMPYGCGEQN 183
+SLLCP ASE +SL++P +VV DSARA+ +VLGD++G+A++N NL+QMP GCGEQN
Sbjct: 917 SSLLCPKGKVASESISLEVPVDVVPDSARAYVAVLGDIMGTALQNLDNLVQMPRGCGEQN 976
Query: 184 MVLFAPNIYVLDYLNETQQLTAEIKSKAIRYLNTGYQRQLLYKHYDGSYSTFGEHYGRSE 363
MVLFAP IYVL YL +T+ LT EI S+A+ +L GYQR+L+YKH +GSYS FGE G
Sbjct: 977 MVLFAPIIYVLQYLEKTELLTEEIWSRAVGFLKLGYQRELMYKHSNGSYSAFGEQDG--N 1034
Query: 364 GNTWLTAFVMKTFAQARTYIFIDETHITEALTWLSQKQKDNGCFRSSGSLLNNAIKGGVD 543
GNTWLTAFV K F QAR +IFID+ +I +AL W++ Q +GC+ + G LL ++KGGVD
Sbjct: 1035 GNTWLTAFVTKCFGQARQFIFIDDKNIQDALEWMAGNQLSSGCYDNVGKLLQTSMKGGVD 1094
Query: 544 DEVTLSAYVTIALLEIPLAVTHPVVRSALFCLETAWKSAQEGSQGSHVYTKALLAYAFAL 723
DEV+L+AY+T ALLE+ + P+V L C++++ S +++YT+ALLAY F+L
Sbjct: 1095 DEVSLTAYITAALLEMGKTIDDPMVSQGLQCVKSSVSST------TNLYTQALLAYTFSL 1148
Query: 724 AGNQEKKKEVLQSLDAEAVKEGDSIHWTRPQKPEAPVQHFYKPRAPSAEVEMTAYVLLTC 903
AGN + +L+ LD +A+ W + V A+ TAYV
Sbjct: 1149 AGNMNIRNILLEKLDQQAIVSAAKCIWGFSSTQDTVV-----ALQALAKYATTAYV---- 1199
Query: 904 LTAQSALSSEDLNLATLIMKWITKQQNSQGGFSSTQDTVVALHALSKYGAATFTRTGKAA 1083
SE +NLA + QN Q F+ V A + L
Sbjct: 1200 -------PSEQVNLA------VKSAQNFQHTFN-----VQAANRL--------------- 1226
Query: 1084 EVTIQSTGTFSKKFXXXXXXXXXXXXISLPAVPGEYSITATGKGCVYLQTSLKYNILPKK 1263
F ++ LP +PG Y++ A+GKGC+Y QT L+YNILP K
Sbjct: 1227 --------VFQQEM--------------LPHIPGVYTLEASGKGCIYAQTVLRYNILPPK 1264
Query: 1264 EDFPFALEVQTLPPTCEPKAHT---SFQISVNVSYTGSRPASNMAIVDVKMVSGFIPLK 1431
F+L V+T C K HT S +++ SY GSR +SNMAIV+VKM+SGF P++
Sbjct: 1265 SLEAFSLSVKTTGSQC--KQHTSLGSLVLTIQTSYVGSRSSSNMAIVEVKMLSGFSPVE 1321
>ref|XP_002688595.1| PREDICTED: C3 and PZP-like, alpha-2-macroglobulin domain containing 8
[Bos taurus].
Length = 1839
Score = 271 bits (692), Expect = 1e-72
Identities = 174/497 (35%), Positives = 262/497 (52%), Gaps = 31/497 (6%)
Frame = +1
Query: 22 SDAGASEQLSLKLPPNVVEDSARAFFSVLGDLLGSAMRNTQNLLQMPYGCGEQNMVLFAP 201
+D SE +L +P + + S RA S++GD++G + + NLL++P+GCGEQNM+ FAP
Sbjct: 1140 ADESYSEAFTLGVPHSAIPGSERAAASIIGDVMGPTLNHLSNLLRLPFGCGEQNMIHFAP 1199
Query: 202 NIYVLDYLNETQQLTAEIKSKAIRYLNTGYQRQLLYKHYDGSYSTFGEHYGRSEGNTWLT 381
N++VL YL +T+QL+ E++ + +L GYQRQL YKH DGSYS FGE G+ WLT
Sbjct: 1200 NVFVLKYLQKTRQLSPEVERETTDHLVQGYQRQLTYKHQDGSYSAFGER--DESGSMWLT 1257
Query: 382 AFVMKTFAQARTYIFIDETHITEALTWLSQKQKDNGCFRSSGSLLNNAIKGGVDDEVTLS 561
AFV+K+FAQAR++IFID + A W+ Q+Q+ +G F + G +LN I+GG+ V L+
Sbjct: 1258 AFVLKSFAQARSFIFIDPLELEAAKDWIVQQQQADGSFPAVGRILNKDIQGGIHGTVPLT 1317
Query: 562 AYVTIALLEIPLAVTHP--VVRSALFCLETAWKSAQEGSQGSHVYTKALLAYAFALAGNQ 735
AYV ALLE+ A + A LE++ S + Y+ AL AYA L
Sbjct: 1318 AYVVAALLEVDPASEEERGAITKARHFLESS------ASLVTDPYSSALTAYALTLL-RS 1370
Query: 736 EKKKEVLQSLDAEAVKEGDSIHWTRPQKPEAPVQHFYK------PRAPSAEVEMTAYVLL 897
L+ L + A+ + HW+ + F SAEVEMTAY LL
Sbjct: 1371 PAAPAALRKLRSLAITQDGVTHWSLTGSRDVDKDAFLSFSDGVYQTVVSAEVEMTAYALL 1430
Query: 898 TCLTAQSALSSEDLNLATLIMKWITKQQNSQGGFSSTQDTVVALHALSKYGAATFTRTGK 1077
T D+ A ++KW+++Q+N+ GGFSSTQDT VAL AL++Y ++ G
Sbjct: 1431 TYTLL------GDVATALPVVKWLSQQRNALGGFSSTQDTCVALQALAEYAILSYA-GGV 1483
Query: 1078 AAEVTIQSTG-TFSKKFXXXXXXXXXXXXISLPAVPGEYSITATGKGCVYLQTSLKYNIL 1254
V++ ST + + F ++P++P ++A G+GC +Q + YN+
Sbjct: 1484 NLTVSLASTNLDYQETFELHRGNQKLLQMAAIPSLPTGLFVSARGEGCCLMQIDVTYNVP 1543
Query: 1255 PKKEDFPFALEVQTLPPTCEPKA------------------HTSFQISVNVS----YTGS 1368
F L V P E + H +Q+++ V + GS
Sbjct: 1544 DPVAKPSFQLLVNLQEPEAEQQRPPSPASSADDDDPAADQHHQEYQVTLEVCTRWLHAGS 1603
Query: 1369 RPASNMAIVDVKMVSGF 1419
SNMA+++V ++SGF
Sbjct: 1604 ---SNMAVLEVPLLSGF 1617
>ref|XP_609516.3| PREDICTED: C3 and PZP-like, alpha-2-macroglobulin domain containing
8, partial [Bos taurus].
Length = 1863
Score = 271 bits (692), Expect = 1e-72
Identities = 174/497 (35%), Positives = 262/497 (52%), Gaps = 31/497 (6%)
Frame = +1
Query: 22 SDAGASEQLSLKLPPNVVEDSARAFFSVLGDLLGSAMRNTQNLLQMPYGCGEQNMVLFAP 201
+D SE +L +P + + S RA S++GD++G + + NLL++P+GCGEQNM+ FAP
Sbjct: 1164 ADESYSEAFTLGVPHSAIPGSERAAASIIGDVMGPTLNHLSNLLRLPFGCGEQNMIHFAP 1223
Query: 202 NIYVLDYLNETQQLTAEIKSKAIRYLNTGYQRQLLYKHYDGSYSTFGEHYGRSEGNTWLT 381
N++VL YL +T+QL+ E++ + +L GYQRQL YKH DGSYS FGE G+ WLT
Sbjct: 1224 NVFVLKYLQKTRQLSPEVERETTDHLVQGYQRQLTYKHQDGSYSAFGER--DESGSMWLT 1281
Query: 382 AFVMKTFAQARTYIFIDETHITEALTWLSQKQKDNGCFRSSGSLLNNAIKGGVDDEVTLS 561
AFV+K+FAQAR++IFID + A W+ Q+Q+ +G F + G +LN I+GG+ V L+
Sbjct: 1282 AFVLKSFAQARSFIFIDPLELEAAKDWIVQQQQADGSFPAVGRILNKDIQGGIHGTVPLT 1341
Query: 562 AYVTIALLEIPLAVTHP--VVRSALFCLETAWKSAQEGSQGSHVYTKALLAYAFALAGNQ 735
AYV ALLE+ A + A LE++ S + Y+ AL AYA L
Sbjct: 1342 AYVVAALLEVDPASEEERGAITKARHFLESS------ASLVTDPYSSALTAYALTLL-RS 1394
Query: 736 EKKKEVLQSLDAEAVKEGDSIHWTRPQKPEAPVQHFYK------PRAPSAEVEMTAYVLL 897
L+ L + A+ + HW+ + F SAEVEMTAY LL
Sbjct: 1395 PAAPAALRKLRSLAITQDGVTHWSLTGSRDVDKDAFLSFSDGVYQTVVSAEVEMTAYALL 1454
Query: 898 TCLTAQSALSSEDLNLATLIMKWITKQQNSQGGFSSTQDTVVALHALSKYGAATFTRTGK 1077
T D+ A ++KW+++Q+N+ GGFSSTQDT VAL AL++Y ++ G
Sbjct: 1455 TYTLL------GDVATALPVVKWLSQQRNALGGFSSTQDTCVALQALAEYAILSYA-GGV 1507
Query: 1078 AAEVTIQSTG-TFSKKFXXXXXXXXXXXXISLPAVPGEYSITATGKGCVYLQTSLKYNIL 1254
V++ ST + + F ++P++P ++A G+GC +Q + YN+
Sbjct: 1508 NLTVSLASTNLDYQETFELHRGNQKLLQMAAIPSLPTGLFVSARGEGCCLMQIDVTYNVP 1567
Query: 1255 PKKEDFPFALEVQTLPPTCEPKA------------------HTSFQISVNVS----YTGS 1368
F L V P E + H +Q+++ V + GS
Sbjct: 1568 DPVAKPSFQLLVNLQEPEAEQQRPPSPASSADDDDPAADQHHQEYQVTLEVCTRWLHAGS 1627
Query: 1369 RPASNMAIVDVKMVSGF 1419
SNMA+++V ++SGF
Sbjct: 1628 ---SNMAVLEVPLLSGF 1641
>ref|XP_002690068.1| PREDICTED: thiolester containing protein II-like [Bos taurus].
Length = 1459
Score = 240 bits (613), Expect = 2e-63
Identities = 166/474 (35%), Positives = 249/474 (52%), Gaps = 16/474 (3%)
Frame = +1
Query: 46 LSLKLPPNVVEDSARAFFSVLGDLLGSAMRNTQNLLQMPYGCGEQNMVLFAPNIYVLDYL 225
LS PP+ V S R + +GD+LGS++ +L++MPYGCGEQNM+ FAPNIY+LDYL
Sbjct: 894 LSFSFPPHTVSGSERVQVTAIGDILGSSINGLASLIRMPYGCGEQNMINFAPNIYILDYL 953
Query: 226 NETQQLTAEIKSKAIRYLNTGYQRQLLYKHYDGSYSTFGEHYGRSEGNTWLTAFVMKTFA 405
+ +QLT +K KA+ ++ GYQR+LLY+ DGS+S FG G+TWL+AFV++ F
Sbjct: 954 TKKKQLTENLKEKALSFMRQGYQRELLYQREDGSFSAFGN--DDPSGSTWLSAFVLRCFL 1011
Query: 406 QARTYIFIDETHITEALTWLSQKQKDNGCFRSSGSLLNNAIKGGVDDEVTLSAYVTIALL 585
+A YI ID+ + TWL QK NG F G ++++ ++GG VTL+AY+ +LL
Sbjct: 1012 EADPYIDIDQNVLHRTYTWLKGHQKSNGEFWEPGRVIHSELQGGNKSPVTLTAYIVTSLL 1071
Query: 586 EIPLAVTHPVVRSALFCLETAWKSAQEGSQG-SHVYTKALLAYAFALAGNQEKKKEVLQS 762
+ V+ ++ LE+ E +G S YT AL+ YA + +G K KE L
Sbjct: 1072 GYKKYQPNIDVQESINFLES------EFDRGISDNYTLALVTYALS-SGRSPKAKEALDM 1124
Query: 763 LDAEAVKEGDSIHWTRPQKPEAPVQHFYKPRAPSA-EVEMTAYVLLTCLTAQSALSSEDL 939
L A +EG W + V + PS+ ++E+ AY LL S +
Sbjct: 1125 LTWRAEQEGGLQFWV------SLVSRLSESWQPSSLDIEVAAYALL------SHFLQHRV 1172
Query: 940 NLATLIMKWITKQQNSQGGFSSTQDTVVALHALSKYGAATFTRTGKAAEVTIQSTGTFSK 1119
IM+W+++Q+NS GGF+STQDT+VAL ALS++ AA +VT++ +G+ S
Sbjct: 1173 PEGIPIMRWLSRQRNSLGGFASTQDTIVALKALSEF-AALMNVEETNIQVTVEGSGSLSP 1231
Query: 1120 -KFXXXXXXXXXXXXISLPAV-PGEYSITATGKGCVYLQTSLKYNI-----------LPK 1260
KF L V P +I+A G G Q ++ YN+ +
Sbjct: 1232 VKFVIDTQNRFLLQTAELAVVQPTTVNISANGFGYAICQLNVIYNVKNSRSSKSRRSIQD 1291
Query: 1261 KEDFPFALEVQTLPPTCEPKAHTSFQISVNVSYTGSRPA-SNMAIVDVKMVSGF 1419
+E F + V+ + +NV PA S MA+++V ++SGF
Sbjct: 1292 QESFDLDVAVKDNKDDVN-------HLDLNVCTRFLGPARSGMALMEVNLLSGF 1338
>ref|XP_613667.3| PREDICTED: thiolester containing protein II-like, partial [Bos
taurus].
Length = 1276
Score = 240 bits (613), Expect = 2e-63
Identities = 166/474 (35%), Positives = 249/474 (52%), Gaps = 16/474 (3%)
Frame = +1
Query: 46 LSLKLPPNVVEDSARAFFSVLGDLLGSAMRNTQNLLQMPYGCGEQNMVLFAPNIYVLDYL 225
LS PP+ V S R + +GD+LGS++ +L++MPYGCGEQNM+ FAPNIY+LDYL
Sbjct: 711 LSFSFPPHTVSGSERVQVTAIGDILGSSINGLASLIRMPYGCGEQNMINFAPNIYILDYL 770
Query: 226 NETQQLTAEIKSKAIRYLNTGYQRQLLYKHYDGSYSTFGEHYGRSEGNTWLTAFVMKTFA 405
+ +QLT +K KA+ ++ GYQR+LLY+ DGS+S FG G+TWL+AFV++ F
Sbjct: 771 TKKKQLTENLKEKALSFMRQGYQRELLYQREDGSFSAFGN--DDPSGSTWLSAFVLRCFL 828
Query: 406 QARTYIFIDETHITEALTWLSQKQKDNGCFRSSGSLLNNAIKGGVDDEVTLSAYVTIALL 585
+A YI ID+ + TWL QK NG F G ++++ ++GG VTL+AY+ +LL
Sbjct: 829 EADPYIDIDQNVLHRTYTWLKGHQKSNGEFWEPGRVIHSELQGGNKSPVTLTAYIVTSLL 888
Query: 586 EIPLAVTHPVVRSALFCLETAWKSAQEGSQG-SHVYTKALLAYAFALAGNQEKKKEVLQS 762
+ V+ ++ LE+ E +G S YT AL+ YA + +G K KE L
Sbjct: 889 GYKKYQPNIDVQESINFLES------EFDRGISDNYTLALVTYALS-SGRSPKAKEALDM 941
Query: 763 LDAEAVKEGDSIHWTRPQKPEAPVQHFYKPRAPSA-EVEMTAYVLLTCLTAQSALSSEDL 939
L A +EG W + V + PS+ ++E+ AY LL S +
Sbjct: 942 LTWRAEQEGGLQFWV------SLVSRLSESWQPSSLDIEVAAYALL------SHFLQHRV 989
Query: 940 NLATLIMKWITKQQNSQGGFSSTQDTVVALHALSKYGAATFTRTGKAAEVTIQSTGTFSK 1119
IM+W+++Q+NS GGF+STQDT+VAL ALS++ AA +VT++ +G+ S
Sbjct: 990 PEGIPIMRWLSRQRNSLGGFASTQDTIVALKALSEF-AALMNVEETNIQVTVEGSGSLSP 1048
Query: 1120 -KFXXXXXXXXXXXXISLPAV-PGEYSITATGKGCVYLQTSLKYNI-----------LPK 1260
KF L V P +I+A G G Q ++ YN+ +
Sbjct: 1049 VKFVIDTQNRFLLQTAELAVVQPTTVNISANGFGYAICQLNVIYNVKNSRSSKSRRSIQD 1108
Query: 1261 KEDFPFALEVQTLPPTCEPKAHTSFQISVNVSYTGSRPA-SNMAIVDVKMVSGF 1419
+E F + V+ + +NV PA S MA+++V ++SGF
Sbjct: 1109 QESFDLDVAVKDNKDDVN-------HLDLNVCTRFLGPARSGMALMEVNLLSGF 1155
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.317 0.131 0.384
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 61,670,996
Number of extensions: 1719835
Number of successful extensions: 6169
Number of sequences better than 1.0e-05: 16
Number of HSP's gapped: 6106
Number of HSP's successfully gapped: 17
Length of query: 511
Length of database: 17,681,374
Length adjustment: 107
Effective length of query: 404
Effective length of database: 14,140,958
Effective search space: 5712947032
Effective search space used: 5712947032
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007228
(1535 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_534893.2| PREDICTED: similar to Alpha-2-macroglobulin pre... 742 0.0
Alignment gi|XP_854220.1| PREDICTED: similar to pregnancy-zone protein [C... 651 0.0
Alignment gi|XP_543824.2| PREDICTED: similar to Alpha-2-macroglobulin pre... 420 e-117
Alignment gi|XP_854216.1| PREDICTED: similar to Alpha-2-macroglobulin pre... 342 4e-94
Alignment gi|XP_852711.1| PREDICTED: similar to C3 and PZP-like, alpha-2-... 263 3e-70
Alignment gi|XP_532205.2| PREDICTED: similar to CD109 [Canis familiaris]. 246 3e-65
Alignment gi|XP_538843.2| PREDICTED: similar to Complement C4 precursor [... 156 6e-38
Alignment gi|XP_533932.2| PREDICTED: similar to Complement C3 precursor [... 119 8e-27
Alignment gi|XP_542077.2| PREDICTED: similar to Complement C3 precursor [... 84 3e-16
>ref|XP_534893.2| PREDICTED: similar to Alpha-2-macroglobulin precursor (Alpha-2-M)
[Canis familiaris].
Length = 2036
Score = 742 bits (1915), Expect = 0.0
Identities = 374/485 (77%), Positives = 415/485 (85%), Gaps = 1/485 (0%)
Frame = +1
Query: 1 FNSLLCPSDAGASEQLSLKLPPNVVEDSARAFFSVLGDLLGSAMRNTQNLLQMPYGCGEQ 180
FNSLLC SDA SEQLSLKLP NVVE+SARA SVLGD+LGSAM+N QNLL+MPYGCGEQ
Sbjct: 1478 FNSLLCASDAEVSEQLSLKLPKNVVEESARASISVLGDILGSAMQNIQNLLRMPYGCGEQ 1537
Query: 181 NMVLFAPNIYVLDYLNETQQLTAEIKSKAIRYLNTGYQRQLLYKHYDGSYSTFGEHYGRS 360
NMVLFAPNIYVL+YLN+T QLT E+ SKAI YLNTGYQRQL YKH DGSYSTFGE YG++
Sbjct: 1538 NMVLFAPNIYVLNYLNKTHQLTPEVMSKAIGYLNTGYQRQLKYKHRDGSYSTFGEQYGKN 1597
Query: 361 EGNTWLTAFVMKTFAQARTYIFIDETHITEALTWLSQKQKDNGCFRSSGSLLNNAIKGGV 540
+GNTWLTAFV+KTFAQART+IFIDE HIT+AL WLSQKQKDNGCFRSSGSLLNNAIKGGV
Sbjct: 1598 KGNTWLTAFVLKTFAQARTHIFIDEAHITQALMWLSQKQKDNGCFRSSGSLLNNAIKGGV 1657
Query: 541 DDEVTLSAYVTIALLEIPLAVTHPVVRSALFCLETAWKSAQEGSQGSHVYTKALLAYAFA 720
+DEVTLSAYVTIALLEIPL+ THPVVRSALFCLE+AWKSA+EG G HVYTKALLAYAFA
Sbjct: 1658 EDEVTLSAYVTIALLEIPLSTTHPVVRSALFCLESAWKSAKEGPHGKHVYTKALLAYAFA 1717
Query: 721 LAGNQEKKKEVLQSLDAEAVKEGDSIHWTRPQKPEAPVQHFYKPRAPSAEVEMTAYVLLT 900
LAGNQEK++E+L L+ EAVKE S+HW RPQKP APV+ FY+PRAPSAEVEMT+YVLL
Sbjct: 1718 LAGNQEKRREILTLLNEEAVKEESSVHWERPQKPRAPVERFYQPRAPSAEVEMTSYVLLA 1777
Query: 901 CLTAQSALSSEDLNLATLIMKWITKQQNSQGGFSSTQDTVVALHALSKYGAATFTRTGKA 1080
L AQ A +SE+L A+ I+KWITKQQNSQGGFSSTQDTVVAL +LS+YGAATFTRTGK
Sbjct: 1778 YLVAQPAPTSEELTSASRIVKWITKQQNSQGGFSSTQDTVVALQSLSRYGAATFTRTGKP 1837
Query: 1081 AEVTIQSTGTFSKKFXXXXXXXXXXXXISLPAVPGEYSITATGKGCVYLQTSLKYNILPK 1260
+VTIQ +GTF KF SLP VP EY++T TG GCVYLQTSLKYNILP+
Sbjct: 1838 TQVTIQYSGTFFTKFQVDDDNRLLLQQTSLPKVPEEYTMTVTGGGCVYLQTSLKYNILPE 1897
Query: 1261 KEDFPFALEVQTLPPTCE-PKAHTSFQISVNVSYTGSRPASNMAIVDVKMVSGFIPLKPQ 1437
+E+ PFALEVQTLP TC+ PKAHTSF I +NVSYTGSRP SNM I DVKMVSGFIPLKP
Sbjct: 1898 REESPFALEVQTLPQTCDRPKAHTSFHILLNVSYTGSRPESNMVITDVKMVSGFIPLKPT 1957
Query: 1438 *KCLK 1452
K L+
Sbjct: 1958 VKMLE 1962
Score = 58.9 bits (141), Expect = 1e-08
Identities = 28/43 (65%), Positives = 37/43 (86%), Gaps = 1/43 (2%)
Frame = +1
Query: 1228 QTSLKYNILPKKEDFPFALEVQTLPPTCE-PKAHTSFQISVNV 1353
Q ++KYNI P+ ED+PFAL++QT+P TC+ PK HTSFQIS+NV
Sbjct: 484 QDTMKYNIFPE-EDYPFALKMQTVPHTCDGPKVHTSFQISLNV 525
>ref|XP_854220.1| PREDICTED: similar to pregnancy-zone protein [Canis familiaris].
Length = 1506
Score = 651 bits (1679), Expect = 0.0
Identities = 331/487 (67%), Positives = 396/487 (81%), Gaps = 2/487 (0%)
Frame = +1
Query: 1 FNSLLCPSDAGASEQLSLKLPPNVVEDSARAFFSVLGDLLGSAMRNTQNLLQMPYGCGEQ 180
FN+LLC ++ E+LSLK+P +VVE SARA +SVLGD+LGSAM+N QNLL+MPYGCGEQ
Sbjct: 938 FNTLLCAAETDVPEKLSLKVPSDVVEGSARATYSVLGDILGSAMQNLQNLLRMPYGCGEQ 997
Query: 181 NMVLFAPNIYVLDYLNETQQLTAEIKSKAIRYLNTGYQRQLLYKHYDGSYSTFGEHYGRS 360
NMVLF PNIYVL+YLNET+QLT IKSKAI YL +GYQRQL YKH DGSYSTFG+H GRS
Sbjct: 998 NMVLFVPNIYVLNYLNETRQLTETIKSKAINYLISGYQRQLNYKHSDGSYSTFGDHDGRS 1057
Query: 361 EGNTWLTAFVMKTFAQARTYIFIDETHITEALTWLSQKQKDNGCFRSSGSLLNNAIKGGV 540
+GNTWLTAFV+K+FAQAR++IF++ +HIT +LTWLSQ+QK+NGCF+ SGSLLNNA+KGGV
Sbjct: 1058 QGNTWLTAFVLKSFAQARSHIFVEMSHITSSLTWLSQRQKENGCFQRSGSLLNNAVKGGV 1117
Query: 541 DDEVTLSAYVTIALLEIPLAVTHPVVRSALFCLETAWKSAQEGSQGSHVYTKALLAYAFA 720
DDE+TLSAY+TIALLE+PL VTHP+VR+ALFCLE+AW S E +QGS VYTKALLAYAFA
Sbjct: 1118 DDELTLSAYITIALLEMPLPVTHPLVRNALFCLESAWGSISE-AQGSLVYTKALLAYAFA 1176
Query: 721 LAGNQEKKKEVLQSLDAEAVKEGDSIHWTRPQKPEAPVQHFYKPRAPSAEVEMTAYVLLT 900
LAGNQ K+ E+L+SLD +AVKE DSIHW RP K E V FY+PRAPS EVEMT+Y+LL
Sbjct: 1177 LAGNQVKRNELLKSLDKDAVKEEDSIHWQRPGKVE-EVTTFYQPRAPSVEVEMTSYLLLA 1235
Query: 901 CLTAQSALSSEDLNLATLIMKWITKQQNSQGGFSSTQDTVVALHALSKYGAATFTRTGKA 1080
LTA A SSEDL++A+ I+KWITKQQN+ GGFSSTQDTVVAL ALSKYGAATF++ K
Sbjct: 1236 YLTASPAPSSEDLSVASRIVKWITKQQNANGGFSSTQDTVVALQALSKYGAATFSKREKT 1295
Query: 1081 AEVTIQSTGTFSKKFXXXXXXXXXXXXISLPAVPGEYSITATGKGCVYLQTSLKYNILPK 1260
VT++S+ TFS+KF + LP +PGEYS T +G GCVYLQTSL+YNILPK
Sbjct: 1296 TVVTVKSSETFSQKFEVHDANRLLLQEVRLPEIPGEYSTTVSGSGCVYLQTSLRYNILPK 1355
Query: 1261 KE-DFPFALEVQTLPPTCE-PKAHTSFQISVNVSYTGSRPASNMAIVDVKMVSGFIPLKP 1434
KE PF L+V T P C+ H FQI +N+SYTG R +SNM IVDVKMVSGFIP+K
Sbjct: 1356 KEGKVPFNLKVDTFPKNCDGVDTHRKFQIHINISYTGERSSSNMVIVDVKMVSGFIPVKS 1415
Query: 1435 Q*KCLKD 1455
+ L++
Sbjct: 1416 SVRKLQE 1422
>ref|XP_543824.2| PREDICTED: similar to Alpha-2-macroglobulin precursor (Alpha-2-M)
[Canis familiaris].
Length = 1449
Score = 420 bits (1080), Expect = e-117
Identities = 219/476 (46%), Positives = 320/476 (67%), Gaps = 1/476 (0%)
Frame = +1
Query: 1 FNSLLCPSDAGASEQLSLKLPPNVVEDSARAFFSVLGDLLGSAMRNTQNLLQMPYGCGEQ 180
++SLLCP ASE +SL+LP +VV DS +A+ +VLGD++G+A++N NL+QMP GCGEQ
Sbjct: 909 YSSLLCPKGQVASESISLELPVDVVPDSTKAYVTVLGDIMGTALQNLDNLVQMPRGCGEQ 968
Query: 181 NMVLFAPNIYVLDYLNETQQLTAEIKSKAIRYLNTGYQRQLLYKHYDGSYSTFGEHYGRS 360
NMVLFAP IYVL YL + LT EIKS+A+ +L GYQ++L+YKH +GSYS FGE G
Sbjct: 969 NMVLFAPIIYVLQYLERARLLTEEIKSQAVGFLKIGYQKELMYKHSNGSYSAFGEQDG-- 1026
Query: 361 EGNTWLTAFVMKTFAQARTYIFIDETHITEALTWLSQKQKDNGCFRSSGSLLNNAIKGGV 540
+GNTWLTAFV K F QA+ +IFID+ +I +AL W++ Q NGC+ + G+L++ A+KGGV
Sbjct: 1027 DGNTWLTAFVTKCFGQAQEFIFIDDKNIQDALKWMAGNQLPNGCYANVGNLIHTAMKGGV 1086
Query: 541 DDEVTLSAYVTIALLEIPLAVTHPVVRSALFCLETAWKSAQEGSQGSHVYTKALLAYAFA 720
+DE++L+AY+T ALLE+ + P+V L CL + S +++YT+ LLAY F+
Sbjct: 1087 EDEISLTAYITAALLEMGMTAHDPMVSQGLKCLRDSVSST------TNLYTQGLLAYTFS 1140
Query: 721 LAGNQEKKKEVLQSLDAEAVKEGDSIHWTRPQKPEAPVQHFYKPRAPSAEVEMTAYVLLT 900
LAG + + +L+ LD +A+ G SIHW++ P + + +P A +VE+TAY+LL
Sbjct: 1141 LAGEMDIRNVLLEKLDQQAIISGGSIHWSQKPIPSLDDRPWSQPEA--VDVELTAYILLA 1198
Query: 901 CLTAQSALSSEDLNLATLIMKWITKQQNSQGGFSSTQDTVVALHALSKYGAATFTRTGKA 1080
L ++++L+ +++ AT I+ W+TKQ+N+ GGFSSTQDTVVAL AL+KY + T +
Sbjct: 1199 QL-SKASLTQKEIAKATAIVAWLTKQRNAYGGFSSTQDTVVALQALAKYATVAYV-TSEK 1256
Query: 1081 AEVTIQSTGTFSKKFXXXXXXXXXXXXISLPAVPGEYSITATGKGCVYLQTSLKYNILPK 1260
+ ++S F F +LP++PG Y++ A+G+GCVY+Q L Y+I P
Sbjct: 1257 VNLAVKSNKNFQHTFSIQAANRLVLQQETLPSIPGVYTLEASGQGCVYVQMVLIYHIPPP 1316
Query: 1261 KEDFPFALEVQTLPPTCE-PKAHTSFQISVNVSYTGSRPASNMAIVDVKMVSGFIP 1425
K F+L V+ CE + S ++++ SY GSR +SNMAIV+VKM+SGF P
Sbjct: 1317 KFVDTFSLSVEMGKARCEQATSPRSLMLTIHTSYVGSRSSSNMAIVEVKMLSGFSP 1372
>ref|XP_854216.1| PREDICTED: similar to Alpha-2-macroglobulin precursor (Alpha-2-M)
[Canis familiaris].
Length = 1699
Score = 342 bits (878), Expect = 4e-94
Identities = 191/473 (40%), Positives = 272/473 (57%)
Frame = +1
Query: 10 LLCPSDAGASEQLSLKLPPNVVEDSARAFFSVLGDLLGSAMRNTQNLLQMPYGCGEQNMV 189
L+C AS+Q+ L LP NVVE SARAF +V+GD+LG AM+N +NLLQMPYGCGEQN+
Sbjct: 1186 LICTKGTKASKQVVLDLPNNVVEGSARAFVTVVGDILGLAMQNLENLLQMPYGCGEQNIA 1245
Query: 190 LFAPNIYVLDYLNETQQLTAEIKSKAIRYLNTGYQRQLLYKHYDGSYSTFGEHYGRSEGN 369
L A + YVLDYL TQQLT E+KSKA +L+ GYQ+QL +K++DGSYS F + +G+
Sbjct: 1246 LLASDTYVLDYLKSTQQLTEEVKSKAFFFLSNGYQKQLSFKNFDGSYSVFWQK--NQKGS 1303
Query: 370 TWLTAFVMKTFAQARTYIFIDETHITEALTWLSQKQKDNGCFRSSGSLLNNAIKGGVDDE 549
WL+A KT + + Y++IDE E L WLS KQ NGCF S G + NNA +
Sbjct: 1304 IWLSALTFKTLERMKEYVYIDEHIQRETLIWLSSKQNINGCFESDGKVFNNAWE------ 1357
Query: 550 VTLSAYVTIALLEIPLAVTHPVVRSALFCLETAWKSAQEGSQGSHVYTKALLAYAFALAG 729
P +R+ LFCLE A ++G +++ A+LAYAFALA
Sbjct: 1358 -------------------FPALRNGLFCLEEA---LEDGVTNGYIH--AILAYAFALAE 1393
Query: 730 NQEKKKEVLQSLDAEAVKEGDSIHWTRPQKPEAPVQHFYKPRAPSAEVEMTAYVLLTCLT 909
+++ + +LQ LD A K + I+W R +KP+ + P APSAE E T YVLL L+
Sbjct: 1394 REKQVESLLQILDQSATKTNNVIYWERAKKPKTDTSPSFIPHAPSAETEKTCYVLLAVLS 1453
Query: 910 AQSALSSEDLNLATLIMKWITKQQNSQGGFSSTQDTVVALHALSKYGAATFTRTGKAAEV 1089
+ + DL A+ I++W+ +Q NS GGFSSTQDT V L A++ Y TF+ +
Sbjct: 1454 KK----TPDLTYASRIVQWLAQQMNSHGGFSSTQDTAVCLLAITHYMKFTFSNDQNTVTL 1509
Query: 1090 TIQSTGTFSKKFXXXXXXXXXXXXISLPAVPGEYSITATGKGCVYLQTSLKYNILPKKED 1269
+ + + ++ F L G+Y++ G+GC ++Q +L+ N+L K+
Sbjct: 1510 SGEES---NEMFQVNGDNRLLVQRSELTKAHGQYTLDVEGQGCAFIQVTLRNNVLLPKKA 1566
Query: 1270 FPFALEVQTLPPTCEPKAHTSFQISVNVSYTGSRPASNMAIVDVKMVSGFIPL 1428
F+L ++ + F + V + YTG SNM +VDVKM+SGF P+
Sbjct: 1567 SGFSLSLEIIKKNSSDTFQRYFDLIVTLKYTGIHNNSNMVLVDVKMLSGFTPV 1619
>ref|XP_852711.1| PREDICTED: similar to C3 and PZP-like, alpha-2-macroglobulin domain
containing 8 [Canis familiaris].
Length = 1746
Score = 263 bits (672), Expect = 3e-70
Identities = 167/495 (33%), Positives = 257/495 (51%), Gaps = 30/495 (6%)
Frame = +1
Query: 25 DAGASEQLSLKLPPNVVEDSARAFFSVLGDLLGSAMRNTQNLLQMPYGCGEQNMVLFAPN 204
D SE +L +P + + S RA SV+GD++G + + NLL++P+GCGEQNM+ FAPN
Sbjct: 1093 DESYSEAFTLGVPHSAIPGSERAVASVIGDVMGPTLNHLSNLLRLPFGCGEQNMIHFAPN 1152
Query: 205 IYVLDYLNETQQLTAEIKSKAIRYLNTGYQRQLLYKHYDGSYSTFGEHYGRSEGNTWLTA 384
I+VL YL +T+QL++E++ + YL GYQRQL Y+H DGSYS FGE + G+ WLTA
Sbjct: 1153 IFVLKYLQKTRQLSSEVEQETTDYLVQGYQRQLTYRHRDGSYSAFGER--DASGSMWLTA 1210
Query: 385 FVMKTFAQARTYIFIDETHITEALTWLSQKQKDNGCFRSSGSLLNNAIKGGVDDEVTLSA 564
FV+K+FAQAR++IFID + A W+ ++Q+ +G F + G +LN I+GG+ V L+A
Sbjct: 1211 FVLKSFAQARSFIFIDPQELEAAKGWIVRQQRADGSFPAVGRILNKDIQGGIHGTVPLTA 1270
Query: 565 YVTIALLEIPLA--VTHPVVRSALFCLETAWKSAQEGSQGSHVYTKALLAYAFALAGNQE 738
YV ALLE +A + A LE++ A + Y+ AL YA L
Sbjct: 1271 YVVAALLETGMASEEERSAIARARHFLESSAPLAVD------PYSSALTTYALTLL-RSP 1323
Query: 739 KKKEVLQSLDAEAVKEGDSIHWTRPQKPEAPVQHF------YKPRAPSAEVEMTAYVLLT 900
L+ L + A+ + HW+ + F SAEVEMTAY LLT
Sbjct: 1324 AAPAALRKLRSLAITQDGVTHWSLTGSRDVDKDAFLSFSDGVSQSVVSAEVEMTAYALLT 1383
Query: 901 CLTAQSALSSEDLNLATLIMKWITKQQNSQGGFSSTQDTVVALHALSKYGAATFTRTGKA 1080
D+ A ++KW+++Q+N+ GGFSSTQDT VAL AL++Y ++ +
Sbjct: 1384 YTLL------GDVATALPVVKWLSQQRNALGGFSSTQDTCVALQALAEYAILSYAGSINL 1437
Query: 1081 AEVTIQSTGTFSKKFXXXXXXXXXXXXISLPAVPGEYSITATGKGCVYLQTSLKYNILPK 1260
+ + + F ++P++P ++A G+GC +Q + Y++
Sbjct: 1438 TVSLASTNLDYQETFELHRANQKVLQTAAIPSLPTGLFVSAKGEGCCLMQIDVTYHVPDP 1497
Query: 1261 KEDFPFALEVQTLPPTCEPKA------------------HTSFQISVNVS----YTGSRP 1374
F L V P + + +Q+++ V + GS
Sbjct: 1498 VAKPAFQLSVSLQEPEAKQRRTPGPAASADDDDPAADQHQQEYQVTLEVCTRWLHAGS-- 1555
Query: 1375 ASNMAIVDVKMVSGF 1419
SNMA+++V ++SGF
Sbjct: 1556 -SNMAVLEVPLLSGF 1569
>ref|XP_532205.2| PREDICTED: similar to CD109 [Canis familiaris].
Length = 1471
Score = 246 bits (629), Expect = 3e-65
Identities = 165/465 (35%), Positives = 249/465 (53%), Gaps = 7/465 (1%)
Frame = +1
Query: 46 LSLKLPPNVVEDSARAFFSVLGDLLGSAMRNTQNLLQMPYGCGEQNMVLFAPNIYVLDYL 225
LS PPN V S R + +GD+LGS++ +L++MPYGCGEQNM+ FAPNIYVLDYL
Sbjct: 906 LSFSFPPNTVSGSERVQITAVGDILGSSINGLASLIRMPYGCGEQNMINFAPNIYVLDYL 965
Query: 226 NETQQLTAEIKSKAIRYLNTGYQRQLLYKHYDGSYSTFGEHYGRSEGNTWLTAFVMKTFA 405
+ +QLT +K KA+ ++ GYQR+LLY+ DGS+S FG G+TWL+AFV++ F
Sbjct: 966 TKKRQLTENLKEKALSFMRQGYQRELLYQREDGSFSAFGN--DDPSGSTWLSAFVLRCFL 1023
Query: 406 QARTYIFIDETHITEALTWLSQKQKDNGCFRSSGSLLNNAIKGGVDDEVTLSAYVTIALL 585
+A YI ID+ + TWL +QK NG F G ++++ ++GG VTL+AY+ +LL
Sbjct: 1024 EADPYIDIDQNVLHRTYTWLKGRQKSNGEFWEPGRVIHSELQGGNKSPVTLTAYIVTSLL 1083
Query: 586 EIPLAVTHPVVRSALFCLETAWKSAQEGSQG-SHVYTKALLAYAFALAGNQEKKKEVLQS 762
+ V+ ++ LE+ E ++G S YT AL+ YA + G+ K KE L
Sbjct: 1084 GYKKYQPNIDVQESINFLES------EFNRGISDNYTLALITYALSSVGS-PKAKEALNM 1136
Query: 763 LDAEAVKEGDSIHWTRPQKPEAPVQHFYKPRAPSAEVEMTAYVLLTCLTAQSALSSEDLN 942
L A +EG W E+ + ++PR S ++E+ AY LL S ++
Sbjct: 1137 LTWRAEQEGGMQFWV---SSESKLSESWQPR--SLDIEVAAYALL------SHFLQYRVS 1185
Query: 943 LATLIMKWITKQQNSQGGFSSTQDTVVALHALSKYGAATFTRTGKAAEVTIQSTGTFSKK 1122
IM+W+++Q+NS GGF+STQDT++AL ALS++ A T + + K
Sbjct: 1186 EGIPIMRWLSRQRNSLGGFASTQDTIIALKALSEFVALMNTERTNIQVTVMGPSSPSPVK 1245
Query: 1123 FXXXXXXXXXXXXISLP-AVPGEYSITATGKGCVYLQTSLKYNILPK-KEDFPFALEVQ- 1293
F L A P +I+A+G G Q ++ YN+ + P +L+ Q
Sbjct: 1246 FRIDTQNRFLLQTAELAVAQPTAVNISASGFGFAICQFNVIYNVKDSGSQRRPRSLQDQE 1305
Query: 1294 --TLPPTCEPKAHTSFQISVNVSYTGSRPA-SNMAIVDVKMVSGF 1419
L +++NV PA S MA+++V ++SGF
Sbjct: 1306 AFDLDVVVRDNKDDINHLNLNVCTRFLGPARSGMALMEVNLLSGF 1350
>ref|XP_538843.2| PREDICTED: similar to Complement C4 precursor [Canis familiaris].
Length = 1587
Score = 156 bits (394), Expect = 6e-38
Identities = 116/354 (32%), Positives = 173/354 (48%), Gaps = 33/354 (9%)
Frame = +1
Query: 145 NLLQMPYGCGEQNMVLFAPNIYVLDYLNETQQ---LTAEIKSKAIRYLNTGYQRQLLYKH 315
+LL++P GCGEQ M+ AP + YL++T+Q L E K A+ + GY R ++
Sbjct: 843 SLLRLPQGCGEQTMIYLAPTLAASRYLDKTEQWSTLPPETKDHAVDLIQKGYMRIQQFRK 902
Query: 316 YDGSYSTFGEHYGRSEGNTWLTAFVMKTFAQARTYIFIDETHITEALTWLSQKQKDNGCF 495
+GSY + + +TWLTAFV+K + A+ + + E WL +Q+ +G F
Sbjct: 903 TNGSYGAWLHR----DSSTWLTAFVLKVLSLAQEQVGGSPEKLQETAKWLLSQQQADGSF 958
Query: 496 RSSGSLLNNAIKGGV---DDEVTLSAYVTIALL------------EIPLAVTHPVVRSAL 630
+ +L+ ++GG+ D+ V L+A+V IAL ++ V ++R+ L
Sbjct: 959 QDPCPVLHRGMQGGLVGDDETVALTAFVVIALQHGLAIFQDDAAEQLKQKVETSILRANL 1018
Query: 631 FCLETAWKSAQEGSQGSHVYTKALLAYAFALAGNQEKKKEVL-QSLDAEAVKEGDSIHWT 807
F E A G+ G+H A+ AYA L+ E +EV ++L A A K GD+++W
Sbjct: 1019 FLGE----KASVGTLGAHA--AAITAYALTLSKAPEDLQEVAHRNLLAMAQKAGDNLYWG 1072
Query: 808 R--------------PQKPEAPVQHFYKPRAPSAEVEMTAYVLLTCLTAQSALSSEDLNL 945
PQ P PV P+AP+ +E TAY LL L + D
Sbjct: 1073 SVPGSQGNVIPPTLVPQGPTDPV-----PQAPAVWIETTAYALLDLLLREGKSEMADHAA 1127
Query: 946 ATLIMKWITKQQNSQGGFSSTQDTVVALHALSKYGAATFTRTGKAAEVTIQSTG 1107
A W+T Q QGGF STQDTV+AL ALS Y + T + VT+ S G
Sbjct: 1128 A-----WLTHQGGFQGGFRSTQDTVIALDALSAYWIVSHTTKERELNVTLSSIG 1176
>ref|XP_533932.2| PREDICTED: similar to Complement C3 precursor [Canis familiaris].
Length = 1549
Score = 119 bits (298), Expect = 8e-27
Identities = 110/442 (24%), Positives = 194/442 (43%), Gaps = 14/442 (3%)
Frame = +1
Query: 142 QNLLQMPYGCGEQNMVLFAPNIYVLDYLNETQQ---LTAEIKSKAIRYLNTGYQRQLLYK 312
++L+ P GCGEQNM+ P + L YL++T+Q E + +A+ + GY +QL ++
Sbjct: 1002 KHLIVTPSGCGEQNMIGMTPTVIALHYLDQTEQWDKFGLEKRQEALELIKKGYTQQLAFR 1061
Query: 313 HYDGSYSTFGEHYGRSEGNTWLTAFVMKTFAQARTYIFIDETHITEALTWL-SQKQKDNG 489
+ +++ F +TWLTA+V+K F+ A I I+ + A+ WL +KQK +G
Sbjct: 1062 QPNSAFAAFQNR----PSSTWLTAYVVKVFSLATNLIAIEAQVLCGAVKWLILEKQKPDG 1117
Query: 490 CFRSSGSLLNNAIKGGV----DDEVTLSAYVTIALLEIPLAVTHPVVRSALFCLETAWKS 657
F+ G +++ + GG + V+L+A+V IAL E + + L ++ +
Sbjct: 1118 IFQEDGPVIHQEMTGGFREAEEKSVSLTAFVLIALKE-----AEDICIGQVNILPSSIEK 1172
Query: 658 AQEGSQGSHVYTKALLAYAFALAGNQEKKKEVLQSLDAEAVKEGDSIHWTRPQKPEAPVQ 837
A G+ + Y Y+ A+AG L LD EGD++ +
Sbjct: 1173 A--GNYLAARYQNLRRPYSVAIAG------YALAHLDK---LEGDNLR--KFLNTARDRN 1219
Query: 838 HFYKPRAPSAEVEMTAYVLLTCLTAQSALSSEDLNLATLIMKWITKQQNSQGGFSSTQDT 1017
+ +P VE T+Y LL L +D + +++W+ +Q+ GG+ STQ T
Sbjct: 1220 RWVEPGKKLYNVEATSYALLALLLL------KDFDNVPPVVRWLNEQRYYGGGYGSTQAT 1273
Query: 1018 VVALHALSKYGAATFTRTGKAAEVTIQSTGTFSKKFXXXXXXXXXXXXISLPAVPGEYSI 1197
+ AL++Y +V+I ++ + +
Sbjct: 1274 FMVFQALAQYQKDVPNHKDLNLQVSINLPSRSTEIKHHIVWDSPSLQRSEETKKNENFEV 1333
Query: 1198 TATGKGCVYLQTSLKYNILPKK----EDFPFALEVQTLPPTCE--PKAHTSFQISVNVSY 1359
A GKG L Y K + F +++Q P + A S +++ Y
Sbjct: 1334 IAKGKGQGTLSVVTMYYAKLKNKATCKKFDLRVDIQPAPENVKRPQDALNSMTLNICTRY 1393
Query: 1360 TGSRPASNMAIVDVKMVSGFIP 1425
G A+ M+I+D+ M++GF P
Sbjct: 1394 LGDEDAT-MSILDISMMTGFSP 1414
>ref|XP_542077.2| PREDICTED: similar to Complement C3 precursor [Canis familiaris].
Length = 1877
Score = 84.3 bits (207), Expect = 3e-16
Identities = 105/431 (24%), Positives = 187/431 (43%), Gaps = 21/431 (4%)
Frame = +1
Query: 196 APNIYVLDYLNETQ---QLTAEIKSKAIRYLNTGYQRQLLYKHYDGSYSTFGEHYGRSEG 366
AP I + YL+ T ++ E++ + I+ + +GY + L ++ G+Y T + G
Sbjct: 924 APVIILTHYLDTTGHWGKVGVELREQVIKNIVSGYTQMLTHRSEHGTYHTSKGN----PG 979
Query: 367 NTWLTAFVMKTFAQARTYI---FIDETHITEALTWL-SQKQKDNGCFRSSGSLLNNAIKG 534
+TWLT++V + FA A + +D + W+ +Q+Q ++G F G+++ ++G
Sbjct: 980 STWLTSYVFRVFALAYPIMATSVLDLHSLCTTANWIITQRQAEDGHFLEEGAVIMAWMQG 1039
Query: 535 GV---DDEVTLSAYVTIALLEIP------LAVTHPVVRSALFCLETAWKSAQEGSQGSHV 687
G + ++L+A V IAL E ++T + R+ F LE Q
Sbjct: 1040 GYRGSEAHISLTALVLIALNEGKDLCRGIQSLTASMERARSF-LEECLPKIQT------T 1092
Query: 688 YTKALLAYAFALAGNQEKKKEVLQSLDAEAVKEGDSIHWTRPQKPEAPVQHFYKPRAPSA 867
+ A+++YA AL N + + L S + D HW PV +
Sbjct: 1093 FAVAIVSYALALT-NSPRANDRLDSFASH-----DKTHW--------PVDNL---EDSLY 1135
Query: 868 EVEMTAYVLLTCLTAQSALSSEDLNLATLIMKWITKQQNSQGGFSSTQDTVVALHALSKY 1047
+E TAY L+ + N I KW+ +++ GGF STQ TVVAL AL+++
Sbjct: 1136 TIEATAYALM------QKVELGRHNETHAIAKWLLEKRELGGGFKSTQTTVVALEALTRF 1189
Query: 1048 GAATFTRTGKAAEVTIQSTGTFSKKFXXXXXXXXXXXXISLPAVPGEYSITATGKGCVYL 1227
A + + + I + + + I A+G G +
Sbjct: 1190 REAVPFNSVQDLRIQISVPKKALNLEWYIDHNNAYQLRSAKFSAQDDIEIKASGSGRGTI 1249
Query: 1228 QTSLKYNILPKKEDFP---FALEVQTLPPTCE--PKAHTSFQISVNVSYTGSRPASNMAI 1392
Y+ + + + L V TL T E K +FQ+ + + G+R A+ M+I
Sbjct: 1250 SILTMYHRSSESWEGTCNLYHLNV-TLHSTLEDNKKEEETFQLRMETRFQGNREAT-MSI 1307
Query: 1393 VDVKMVSGFIP 1425
++V +++GF P
Sbjct: 1308 IEVSLLTGFYP 1318
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.317 0.131 0.384
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 64,154,359
Number of extensions: 1760208
Number of successful extensions: 6461
Number of sequences better than 1.0e-05: 9
Number of HSP's gapped: 6427
Number of HSP's successfully gapped: 10
Length of query: 511
Length of database: 18,874,504
Length adjustment: 107
Effective length of query: 404
Effective length of database: 15,307,552
Effective search space: 6184251008
Effective search space used: 6184251008
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007228
(1535 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_000005.2| alpha-2-macroglobulin precursor [Homo sapiens]. 790 0.0
Alignment gi|NP_002855.2| pregnancy zone protein precursor [Homo sapiens]. 721 0.0
Alignment gi|NP_653271.2| alpha-2-macroglobulin-like protein 1 precursor ... 424 e-118
Alignment gi|XP_002343192.1| PREDICTED: ovostatin homolog 2 [Homo sapiens]. 342 7e-94
Alignment gi|XP_001715949.2| PREDICTED: LOW QUALITY PROTEIN: ovostatin ho... 335 7e-92
Alignment gi|NP_056507.2| C3 and PZP-like alpha-2-macroglobulin domain-co... 262 6e-70
Alignment gi|NP_001153060.1| CD109 antigen isoform 3 precursor [Homo sapi... 246 3e-65
Alignment gi|NP_598000.2| CD109 antigen isoform 1 precursor [Homo sapiens]. 246 3e-65
Alignment gi|NP_001153059.1| CD109 antigen isoform 2 precursor [Homo sapi... 242 6e-64
Alignment gi|NP_001002029.3| complement C4-B preproprotein [Homo sapiens]. 152 6e-37
>ref|NP_000005.2| alpha-2-macroglobulin precursor [Homo sapiens].
Length = 1474
Score = 790 bits (2041), Expect = 0.0
Identities = 396/485 (81%), Positives = 435/485 (89%), Gaps = 1/485 (0%)
Frame = +1
Query: 1 FNSLLCPSDAGASEQLSLKLPPNVVEDSARAFFSVLGDLLGSAMRNTQNLLQMPYGCGEQ 180
FNSLLCPS SE+LSLKLPPNVVE+SARA SVLGD+LGSAM+NTQNLLQMPYGCGEQ
Sbjct: 916 FNSLLCPSGGEVSEELSLKLPPNVVEESARASVSVLGDILGSAMQNTQNLLQMPYGCGEQ 975
Query: 181 NMVLFAPNIYVLDYLNETQQLTAEIKSKAIRYLNTGYQRQLLYKHYDGSYSTFGEHYGRS 360
NMVLFAPNIYVLDYLNETQQLT EIKSKAI YLNTGYQRQL YKHYDGSYSTFGE YGR+
Sbjct: 976 NMVLFAPNIYVLDYLNETQQLTPEIKSKAIGYLNTGYQRQLNYKHYDGSYSTFGERYGRN 1035
Query: 361 EGNTWLTAFVMKTFAQARTYIFIDETHITEALTWLSQKQKDNGCFRSSGSLLNNAIKGGV 540
+GNTWLTAFV+KTFAQAR YIFIDE HIT+AL WLSQ+QKDNGCFRSSGSLLNNAIKGGV
Sbjct: 1036 QGNTWLTAFVLKTFAQARAYIFIDEAHITQALIWLSQRQKDNGCFRSSGSLLNNAIKGGV 1095
Query: 541 DDEVTLSAYVTIALLEIPLAVTHPVVRSALFCLETAWKSAQEGSQGSHVYTKALLAYAFA 720
+DEVTLSAY+TIALLEIPL VTHPVVR+ALFCLE+AWK+AQEG GSHVYTKALLAYAFA
Sbjct: 1096 EDEVTLSAYITIALLEIPLTVTHPVVRNALFCLESAWKTAQEGDHGSHVYTKALLAYAFA 1155
Query: 721 LAGNQEKKKEVLQSLDAEAVKEGDSIHWTRPQKPEAPVQHFYKPRAPSAEVEMTAYVLLT 900
LAGNQ+K+KEVL+SL+ EAVK+ +S+HW RPQKP+APV HFY+P+APSAEVEMT+YVLL
Sbjct: 1156 LAGNQDKRKEVLKSLNEEAVKKDNSVHWERPQKPKAPVGHFYEPQAPSAEVEMTSYVLLA 1215
Query: 901 CLTAQSALSSEDLNLATLIMKWITKQQNSQGGFSSTQDTVVALHALSKYGAATFTRTGKA 1080
LTAQ A +SEDL AT I+KWITKQQN+QGGFSSTQDTVVALHALSKYGAATFTRTGKA
Sbjct: 1216 YLTAQPAPTSEDLTSATNIVKWITKQQNAQGGFSSTQDTVVALHALSKYGAATFTRTGKA 1275
Query: 1081 AEVTIQSTGTFSKKFXXXXXXXXXXXXISLPAVPGEYSITATGKGCVYLQTSLKYNILPK 1260
A+VTIQS+GTFS KF +SLP +PGEYS+ TG+GCVYLQTSLKYNILP+
Sbjct: 1276 AQVTIQSSGTFSSKFQVDNNNRLLLQQVSLPELPGEYSMKVTGEGCVYLQTSLKYNILPE 1335
Query: 1261 KEDFPFALEVQTLPPTC-EPKAHTSFQISVNVSYTGSRPASNMAIVDVKMVSGFIPLKPQ 1437
KE+FPFAL VQTLP TC EPKAHTSFQIS++VSYTGSR ASNMAIVDVKMVSGFIPLKP
Sbjct: 1336 KEEFPFALGVQTLPQTCDEPKAHTSFQISLSVSYTGSRSASNMAIVDVKMVSGFIPLKPT 1395
Query: 1438 *KCLK 1452
K L+
Sbjct: 1396 VKMLE 1400
>ref|NP_002855.2| pregnancy zone protein precursor [Homo sapiens].
Length = 1482
Score = 721 bits (1860), Expect = 0.0
Identities = 361/485 (74%), Positives = 412/485 (84%), Gaps = 1/485 (0%)
Frame = +1
Query: 1 FNSLLCPSDAGASEQLSLKLPPNVVEDSARAFFSVLGDLLGSAMRNTQNLLQMPYGCGEQ 180
F+S+ C S A SEQLSLKLP NVV++SARA FSVLGD+LGSAM+N QNLLQMPYGCGEQ
Sbjct: 922 FSSMTCASGANVSEQLSLKLPSNVVKESARASFSVLGDILGSAMQNIQNLLQMPYGCGEQ 981
Query: 181 NMVLFAPNIYVLDYLNETQQLTAEIKSKAIRYLNTGYQRQLLYKHYDGSYSTFGEHYGRS 360
NMVLFAPNIYVL+YLNETQQLT EIK+KA+ YL TGYQRQL YKH DGSYSTFGE YGR+
Sbjct: 982 NMVLFAPNIYVLNYLNETQQLTQEIKAKAVGYLITGYQRQLNYKHQDGSYSTFGERYGRN 1041
Query: 361 EGNTWLTAFVMKTFAQARTYIFIDETHITEALTWLSQKQKDNGCFRSSGSLLNNAIKGGV 540
+GNTWLTAFV+KTFAQAR+YIFIDE HIT++LTWLSQ QKDNGCFRSSGSLLNNAIKGGV
Sbjct: 1042 QGNTWLTAFVLKTFAQARSYIFIDEAHITQSLTWLSQMQKDNGCFRSSGSLLNNAIKGGV 1101
Query: 541 DDEVTLSAYVTIALLEIPLAVTHPVVRSALFCLETAWKSAQEGSQGSHVYTKALLAYAFA 720
+DE TLSAYVTIALLEIPL VT+P+VR+ALFCLE+AW A+EG+ GSHVYTKALLAYAF+
Sbjct: 1102 EDEATLSAYVTIALLEIPLPVTNPIVRNALFCLESAWNVAKEGTHGSHVYTKALLAYAFS 1161
Query: 721 LAGNQEKKKEVLQSLDAEAVKEGDSIHWTRPQKPEAPVQHFYKPRAPSAEVEMTAYVLLT 900
L G Q + +E+L SLD EAVKE + +HW RPQ+P+APV H Y+ +APSAEVEMT+YVLL
Sbjct: 1162 LLGKQNQNREILNSLDKEAVKEDNLVHWERPQRPKAPVGHLYQTQAPSAEVEMTSYVLLA 1221
Query: 901 CLTAQSALSSEDLNLATLIMKWITKQQNSQGGFSSTQDTVVALHALSKYGAATFTRTGKA 1080
LTAQ A +S DL AT I+KWI KQQN+QGGFSSTQDTVVALHALS+YGAATFTRT K
Sbjct: 1222 YLTAQPAPTSGDLTSATNIVKWIMKQQNAQGGFSSTQDTVVALHALSRYGAATFTRTEKT 1281
Query: 1081 AEVTIQSTGTFSKKFXXXXXXXXXXXXISLPAVPGEYSITATGKGCVYLQTSLKYNILPK 1260
A+VT+Q + TFS F ISLP +PGEY IT TG+ CVYLQTS+KYNILP+
Sbjct: 1282 AQVTVQDSQTFSTNFQVDNNNLLLLQQISLPELPGEYVITVTGERCVYLQTSMKYNILPE 1341
Query: 1261 KEDFPFALEVQTLPPTCE-PKAHTSFQISVNVSYTGSRPASNMAIVDVKMVSGFIPLKPQ 1437
KED PFAL+VQT+P TC+ KAHTSFQIS+ +SYTG+RPASNM IVDVKMVSGFIPLKP
Sbjct: 1342 KEDSPFALKVQTVPQTCDGHKAHTSFQISLTISYTGNRPASNMVIVDVKMVSGFIPLKPT 1401
Query: 1438 *KCLK 1452
K L+
Sbjct: 1402 VKMLE 1406
>ref|NP_653271.2| alpha-2-macroglobulin-like protein 1 precursor [Homo sapiens].
Length = 1454
Score = 424 bits (1089), Expect = e-118
Identities = 227/477 (47%), Positives = 321/477 (67%), Gaps = 1/477 (0%)
Frame = +1
Query: 4 NSLLCPSDAGASEQLSLKLPPNVVEDSARAFFSVLGDLLGSAMRNTQNLLQMPYGCGEQN 183
+SLLCP ASE +SL+LP ++V DS +A+ +VLGD++G+A++N L+QMP GCGEQN
Sbjct: 915 SSLLCPKGKVASESVSLELPVDIVPDSTKAYVTVLGDIMGTALQNLDGLVQMPSGCGEQN 974
Query: 184 MVLFAPNIYVLDYLNETQQLTAEIKSKAIRYLNTGYQRQLLYKHYDGSYSTFGEHYGRSE 363
MVLFAP IYVL YL + LT EI+S+A+ +L GYQ++L+YKH +GSYS FGE G
Sbjct: 975 MVLFAPIIYVLQYLEKAGLLTEEIRSRAVGFLEIGYQKELMYKHSNGSYSAFGERDG--N 1032
Query: 364 GNTWLTAFVMKTFAQARTYIFIDETHITEALTWLSQKQKDNGCFRSSGSLLNNAIKGGVD 543
GNTWLTAFV K F QA+ +IFID +I +AL W++ Q +GC+ + G+LL+ A+KGGVD
Sbjct: 1033 GNTWLTAFVTKCFGQAQKFIFIDPKNIQDALKWMAGNQLPSGCYANVGNLLHTAMKGGVD 1092
Query: 544 DEVTLSAYVTIALLEIPLAVTHPVVRSALFCLETAWKSAQEGSQGSHVYTKALLAYAFAL 723
DEV+L+AYVT ALLE+ V P+V L CL+ + S +++YT+ALLAY F+L
Sbjct: 1093 DEVSLTAYVTAALLEMGKDVDDPMVSQGLRCLKNSATST------TNLYTQALLAYIFSL 1146
Query: 724 AGNQEKKKEVLQSLDAEAVKEGDSIHWTRPQKPEAPVQHFYKPRAPSAEVEMTAYVLLTC 903
AG + + +L+ LD +A+ G+SI+W++ P + + +P A +VE+TAY LL
Sbjct: 1147 AGEMDIRNILLKQLDQQAIISGESIYWSQKPTPSSNASPWSEPAA--VDVELTAYALLAQ 1204
Query: 904 LTAQSALSSEDLNLATLIMKWITKQQNSQGGFSSTQDTVVALHALSKYGAATFTRTGKAA 1083
LT S L+ +++ AT I+ W+ KQ+N+ GGFSSTQDTVVAL AL+KY A T +
Sbjct: 1205 LTKPS-LTQKEIAKATSIVAWLAKQRNAYGGFSSTQDTVVALQALAKY-ATTAYMPSEEI 1262
Query: 1084 EVTIQSTGTFSKKFXXXXXXXXXXXXISLPAVPGEYSITATGKGCVYLQTSLKYNILPKK 1263
+ ++ST F + F +LP VPG Y++ A+G+GCVY+QT L+YNILP
Sbjct: 1263 NLVVKSTENFQRTFNIQSVNRLVFQQDTLPNVPGMYTLEASGQGCVYVQTVLRYNILPPT 1322
Query: 1264 EDFPFALEVQTLPPTCE-PKAHTSFQISVNVSYTGSRPASNMAIVDVKMVSGFIPLK 1431
F+L V+ CE P + S ++++ SY GSR +SNMAIV+VKM+SGF P++
Sbjct: 1323 NMKTFSLSVEIGKARCEQPTSPRSLTLTIHTSYVGSRSSSNMAIVEVKMLSGFSPME 1379
>ref|XP_002343192.1| PREDICTED: ovostatin homolog 2 [Homo sapiens].
Length = 1394
Score = 342 bits (876), Expect = 7e-94
Identities = 195/473 (41%), Positives = 287/473 (60%), Gaps = 1/473 (0%)
Frame = +1
Query: 10 LLCPSDAGASEQLSLKLPPNVVEDSARAFFSVLGDLLGSAMRNTQNLLQMPYGCGEQNMV 189
L+C A AS+Q L LP +VVE SAR FF+V+GD+LG AM+N +LQMPYG GEQN
Sbjct: 907 LICTEGAKASKQGVLDLPNDVVEGSARGFFTVVGDILGLAMQNLV-VLQMPYGGGEQNAA 965
Query: 190 LFAPNIYVLDYLNETQQLTAEIKSKAIRYLNTGYQRQLLYKHYDGSYSTFGEHYGRSEGN 369
L A + YVLDYL T+QLT E++SKA L+ GYQRQL +K+ DGSYS F + +G+
Sbjct: 966 LLASDTYVLDYLKSTEQLTEEVQSKAFFLLSNGYQRQLSFKNSDGSYSVFWQQ--NQKGS 1023
Query: 370 TWLTAFVMKTFAQARTYIFIDETHITEALTWLSQKQKDNGCFRSSGSLLNNAIKGGVDDE 549
WL+A KT + + ++FIDE + L WLS +QK +GCF++ G L N+A +GG +++
Sbjct: 1024 IWLSALTFKTLERMKKFVFIDENVQKQTLIWLSSQQKTSGCFKNDGQLFNHAWEGGDEED 1083
Query: 550 VTLSAYVTIALLEIPLAVTHPVVRSALFCLETAWKSAQEGSQGSHVYTKALLAYAFALAG 729
++L+AYV E L T P +R+ALFCLE A S ++ Y A+LAYAFALAG
Sbjct: 1084 ISLTAYVVGMFFEAGLNSTFPALRNALFCLEAALDSGV-----TNGYNHAILAYAFALAG 1138
Query: 730 NQEKKKEVLQSLDAEAVKEGDSIHWTRPQKPEAPVQHFYKPRAPSAEVEMTAYVLLTCLT 909
+++ + +LQ+LD A K + I+W R +KP+ + P APSA+ E + YVLL ++
Sbjct: 1139 KEKQVESLLQTLDQSATKLNNVIYWERERKPKTEEFPSFIPWAPSAQTEKSCYVLLAVIS 1198
Query: 910 AQSALSSEDLNLATLIMKWITKQQNSQGGFSSTQDTVVALHALSKYG-AATFTRTGKAAE 1086
+ DL A+ I++W+ +Q NS GGFSS Q V L ++ G F++
Sbjct: 1199 RK----IPDLTYASKIVQWLAQQMNSHGGFSSNQVINVGLILIAICGEEGLFSKNQNT-- 1252
Query: 1087 VTIQSTGTFSKKFXXXXXXXXXXXXISLPAVPGEYSITATGKGCVYLQTSLKYNILPKKE 1266
VT S G+ +F ++ PG+Y++ G+GC ++Q +LKYN+L K+
Sbjct: 1253 VTFSSEGSSEIQFNGHNRLLVQRSEVT--QAPGQYTVDVEGRGCTFIQATLKYNVLLPKK 1310
Query: 1267 DFPFALEVQTLPPTCEPKAHTSFQISVNVSYTGSRPASNMAIVDVKMVSGFIP 1425
F+L ++ + + + T F ++VN+ YTG R S+M ++DVKM+SGF P
Sbjct: 1311 ASGFSLSLEIV----KNYSLTVFDLTVNLKYTGIRNKSSMVVIDVKMLSGFTP 1359
>ref|XP_001715949.2| PREDICTED: LOW QUALITY PROTEIN: ovostatin homolog 2 [Homo sapiens].
Length = 1372
Score = 335 bits (859), Expect = 7e-92
Identities = 193/477 (40%), Positives = 283/477 (59%), Gaps = 5/477 (1%)
Frame = +1
Query: 10 LLCPSDAGASEQLSLKLPPNVVEDSARAFFSVLGDLLGSAMRNTQNLLQMPYGCGEQNMV 189
L+C A AS+Q L LP +VVE SAR FF+V+GD+LG A++N +LQMPYG GEQN
Sbjct: 877 LICTEGAKASKQGVLDLPNDVVEGSARGFFTVVGDILGLALQNLV-VLQMPYGSGEQNAA 935
Query: 190 LFAPNIYVLDYLNETQQLTAEIKSKAIRYLNTGYQRQLLYKHYDGSYSTFGEHYGRSEGN 369
L A + YVLDYL T+QLT E++SKA L+ GYQRQL +K+ DGSYS F + +G+
Sbjct: 936 LLASDTYVLDYLKSTEQLTEEVQSKAFFLLSNGYQRQLSFKNSDGSYSVFWQQ--SQKGS 993
Query: 370 TWLTAFVMKTFAQARTYIFIDETHITEALTWLSQKQKDNGCFRSSGSLLNNAIKGGVDDE 549
L+A KT + + Y+FIDE + L WLS +QK +GCF++ G L N+A +GG +++
Sbjct: 994 IXLSALTFKTLERMKKYVFIDENVQKQTLIWLSSQQKTSGCFKNDGQLFNHAWEGGDEED 1053
Query: 550 VTLSAYVTIALLEIPLAVTHPVVRSALFCLETAWKSAQEGSQGSHVYTKALLAYAFALAG 729
++L+AYV E L T P +R+ALFCLE A S ++ Y A+LAYAFALAG
Sbjct: 1054 ISLTAYVVGMFFEAGLNFTFPALRNALFCLEAALDSGV-----TNGYNHAILAYAFALAG 1108
Query: 730 NQEKKKEVLQSLDAEAVKEGDSIHWTRPQKPEAPVQHFYKPRAPSAEVEMTAYVLLTCLT 909
+++ + +LQ+LD A K + I+W R +KP+ + P APSA+ E + YVLL ++
Sbjct: 1109 KEKQVESLLQTLDQSAPKLNNVIYWERERKPKTEEFPSFIPWAPSAQTEKSCYVLLAVIS 1168
Query: 910 AQSALSSEDLNLATLIMKWITKQQNSQGGFSSTQDTVVALHALSKYGAATFTRTGKAAEV 1089
+ DL A+ I++W+ ++ NS GGFSS Q V L ++ R +
Sbjct: 1169 RK----IPDLTYASKIVQWLAQRMNSHGGFSSNQVINVGLILIAICLMQKLARGEEGLFS 1224
Query: 1090 TIQSTGTFSKK-----FXXXXXXXXXXXXISLPAVPGEYSITATGKGCVYLQTSLKYNIL 1254
Q+T TFS + F + PGEY++ G GC ++Q +LKYN+L
Sbjct: 1225 KDQNTVTFSSEGSSEIFQVNGHNRLLVQRSEVTQAPGEYTVDVEGHGCTFIQATLKYNVL 1284
Query: 1255 PKKEDFPFALEVQTLPPTCEPKAHTSFQISVNVSYTGSRPASNMAIVDVKMVSGFIP 1425
K+ F+L ++ + + + T+F ++V + YTG R S+M ++DVKM+SGF P
Sbjct: 1285 LPKKASGFSLSLEIV----KNYSSTAFDLTVTLKYTGIRNKSSMVVIDVKMLSGFTP 1337
>ref|NP_056507.2| C3 and PZP-like alpha-2-macroglobulin domain-containing protein 8
[Homo sapiens].
Length = 1932
Score = 262 bits (670), Expect = 6e-70
Identities = 176/506 (34%), Positives = 258/506 (50%), Gaps = 41/506 (8%)
Frame = +1
Query: 25 DAGASEQLSLKLPPNVVEDSARAFFSVLGDLLGSAMRNTQNLLQMPYGCGEQNMVLFAPN 204
D SE +L +P + S RA S++GD++G + + NLL++P+GCGEQNM+ FAPN
Sbjct: 1143 DESYSEAFTLGVPHGAIPGSERATASIIGDVMGPTLNHLNNLLRLPFGCGEQNMIHFAPN 1202
Query: 205 IYVLDYLNETQQLTAEIKSKAIRYLNTGYQRQLLYKHYDGSYSTFGEHYGRSEGNTWLTA 384
++VL YL +TQQL+ E++ + YL GYQRQL YK DGSYS FGE + G+ WLTA
Sbjct: 1203 VFVLKYLQKTQQLSPEVERETTDYLVQGYQRQLTYKRQDGSYSAFGER--DASGSMWLTA 1260
Query: 385 FVMKTFAQARTYIFIDETHITEALTWLSQKQKDNGCFRSSGSLLNNAIKGGVDDEVTLSA 564
FV+K+FAQAR++IF+D + A +W+ Q+Q+ +G F + G +LN I+GG+ V L+A
Sbjct: 1261 FVLKSFAQARSFIFVDPRELAAAKSWIIQQQQADGSFLAVGRVLNKDIQGGIHGTVPLTA 1320
Query: 565 YVTIALLEIPLAVTHP--VVRSALFCLETAWKSAQEGSQGSHVYTKALLAYAFALAGNQE 738
YV +ALLE A A LE+A A + Y+ AL YA L
Sbjct: 1321 YVVVALLETGTASEEERGSTDKARHFLESAAPLAMD------PYSCALTTYALTLL-RSP 1373
Query: 739 KKKEVLQSLDAEAVKEGDSIHWTRPQKPEAPVQHF------YKPRAPSAEVEMTAYVLLT 900
E L+ L + A+ HW+ + F SAEVEMTAY LLT
Sbjct: 1374 AAPEALRKLRSLAIMRDGVTHWSLSNSWDVDKGTFLSFSDRVSQSVVSAEVEMTAYALLT 1433
Query: 901 CLTAQSALSSEDLNLATLIMKWITKQQNSQGGFSSTQDTVVALHALSKYGAATFTRTGKA 1080
D+ A ++KW+++Q+N+ GGFSSTQDT VAL AL++Y ++ G
Sbjct: 1434 YTLL------GDVAAALPVVKWLSQQRNALGGFSSTQDTCVALQALAEYAILSYA-GGIN 1486
Query: 1081 AEVTIQSTG-TFSKKFXXXXXXXXXXXXISLPAVPGEYSITATGKGCVYLQTSLKYNILP 1257
V++ ST + + F ++P++P ++A G GC +Q + YN+
Sbjct: 1487 LTVSLASTNLDYQETFELHRTNQKVLQTAAIPSLPTGLFVSAKGDGCCLMQIDVTYNVPD 1546
Query: 1258 KKEDFPFAL-------EVQTLPPTCEPKA---------------------HTSFQISVNV 1353
F L E Q PP A H +++ + V
Sbjct: 1547 PVAKPAFQLLVSLQEPEAQGRPPPMPASAAEGSRGDWPPADDDDPAADQHHQEYKVMLEV 1606
Query: 1354 S----YTGSRPASNMAIVDVKMVSGF 1419
+ GS SNMA+++V ++SGF
Sbjct: 1607 CTRWLHAGS---SNMAVLEVPLLSGF 1629
>ref|NP_001153060.1| CD109 antigen isoform 3 precursor [Homo sapiens].
Length = 1368
Score = 246 bits (629), Expect = 3e-65
Identities = 172/474 (36%), Positives = 257/474 (54%), Gaps = 15/474 (3%)
Frame = +1
Query: 46 LSLKLPPNVVEDSARAFFSVLGDLLGSAMRNTQNLLQMPYGCGEQNMVLFAPNIYVLDYL 225
LS PPN V S R + +GD+LG ++ +L++MPYGCGEQNM+ FAPNIY+LDYL
Sbjct: 803 LSFSFPPNTVTGSERVQITAIGDVLGPSINGLASLIRMPYGCGEQNMINFAPNIYILDYL 862
Query: 226 NETQQLTAEIKSKAIRYLNTGYQRQLLYKHYDGSYSTFGEHYGRSEGNTWLTAFVMKTFA 405
+ +QLT +K KA+ ++ GYQR+LLY+ DGS+S FG + G+TWL+AFV++ F
Sbjct: 863 TKKKQLTDNLKEKALSFMRQGYQRELLYQREDGSFSAFGNY--DPSGSTWLSAFVLRCFL 920
Query: 406 QARTYIFIDETHITEALTWLSQKQKDNGCFRSSGSLLNNAIKGGVDDEVTLSAYVTIALL 585
+A YI ID+ + TWL QK NG F G ++++ ++GG VTL+AY+ +LL
Sbjct: 921 EADPYIDIDQNVLHRTYTWLKGHQKSNGEFWDPGRVIHSELQGGNKSPVTLTAYIVTSLL 980
Query: 586 EIPLAVTHPVVRSALFCLETAWKSAQEGSQG-SHVYTKALLAYAFALAGNQEKKKEVLQS 762
+ V+ ++ LE+ E S+G S YT AL+ YA + G+ K KE L
Sbjct: 981 GYRKYQPNIDVQESIHFLES------EFSRGISDNYTLALITYALSSVGS-PKAKEALNM 1033
Query: 763 LDAEAVKEGDSIHWTRPQKPEAPVQHFYKPRAPSAEVEMTAYVLLTCLTAQSALSSEDLN 942
L A +EG W E+ + ++PR S ++E+ AY LL+ +SE +
Sbjct: 1034 LTWRAEQEGGMQFWV---SSESKLSDSWQPR--SLDIEVAAYALLSHFL--QFQTSEGIP 1086
Query: 943 LATLIMKWITKQQNSQGGFSSTQDTVVALHALSKYGAATFT-RTGKAAEVTIQSTGTFSK 1119
IM+W+++Q+NS GGF+STQDT VAL ALS++ A T RT VT S+ +
Sbjct: 1087 ----IMRWLSRQRNSLGGFASTQDTTVALKALSEFAALMNTERTNIQVTVTGPSSPS-PV 1141
Query: 1120 KFXXXXXXXXXXXXISLPAV-PGEYSITATGKGCVYLQTSLKYNI-----------LPKK 1263
KF L V P +I+A G G Q ++ YN+ + +
Sbjct: 1142 KFLIDTHNRLLLQTAELAVVQPTAVNISANGFGFAICQLNVVYNVKASGSSRRRRSIQNQ 1201
Query: 1264 EDFPFALEVQTLPPTCEPKAHTSFQISVNVSYTGSRPA-SNMAIVDVKMVSGFI 1422
E F + V+ E K + + +NV + S P S MA+++V ++SGF+
Sbjct: 1202 EAFDLDVAVK------ENKDDLN-HVDLNVCTSFSGPGRSGMALMEVNLLSGFM 1248
>ref|NP_598000.2| CD109 antigen isoform 1 precursor [Homo sapiens].
Length = 1445
Score = 246 bits (629), Expect = 3e-65
Identities = 172/474 (36%), Positives = 257/474 (54%), Gaps = 15/474 (3%)
Frame = +1
Query: 46 LSLKLPPNVVEDSARAFFSVLGDLLGSAMRNTQNLLQMPYGCGEQNMVLFAPNIYVLDYL 225
LS PPN V S R + +GD+LG ++ +L++MPYGCGEQNM+ FAPNIY+LDYL
Sbjct: 880 LSFSFPPNTVTGSERVQITAIGDVLGPSINGLASLIRMPYGCGEQNMINFAPNIYILDYL 939
Query: 226 NETQQLTAEIKSKAIRYLNTGYQRQLLYKHYDGSYSTFGEHYGRSEGNTWLTAFVMKTFA 405
+ +QLT +K KA+ ++ GYQR+LLY+ DGS+S FG + G+TWL+AFV++ F
Sbjct: 940 TKKKQLTDNLKEKALSFMRQGYQRELLYQREDGSFSAFGNY--DPSGSTWLSAFVLRCFL 997
Query: 406 QARTYIFIDETHITEALTWLSQKQKDNGCFRSSGSLLNNAIKGGVDDEVTLSAYVTIALL 585
+A YI ID+ + TWL QK NG F G ++++ ++GG VTL+AY+ +LL
Sbjct: 998 EADPYIDIDQNVLHRTYTWLKGHQKSNGEFWDPGRVIHSELQGGNKSPVTLTAYIVTSLL 1057
Query: 586 EIPLAVTHPVVRSALFCLETAWKSAQEGSQG-SHVYTKALLAYAFALAGNQEKKKEVLQS 762
+ V+ ++ LE+ E S+G S YT AL+ YA + G+ K KE L
Sbjct: 1058 GYRKYQPNIDVQESIHFLES------EFSRGISDNYTLALITYALSSVGS-PKAKEALNM 1110
Query: 763 LDAEAVKEGDSIHWTRPQKPEAPVQHFYKPRAPSAEVEMTAYVLLTCLTAQSALSSEDLN 942
L A +EG W E+ + ++PR S ++E+ AY LL+ +SE +
Sbjct: 1111 LTWRAEQEGGMQFWV---SSESKLSDSWQPR--SLDIEVAAYALLSHFL--QFQTSEGIP 1163
Query: 943 LATLIMKWITKQQNSQGGFSSTQDTVVALHALSKYGAATFT-RTGKAAEVTIQSTGTFSK 1119
IM+W+++Q+NS GGF+STQDT VAL ALS++ A T RT VT S+ +
Sbjct: 1164 ----IMRWLSRQRNSLGGFASTQDTTVALKALSEFAALMNTERTNIQVTVTGPSSPS-PV 1218
Query: 1120 KFXXXXXXXXXXXXISLPAV-PGEYSITATGKGCVYLQTSLKYNI-----------LPKK 1263
KF L V P +I+A G G Q ++ YN+ + +
Sbjct: 1219 KFLIDTHNRLLLQTAELAVVQPTAVNISANGFGFAICQLNVVYNVKASGSSRRRRSIQNQ 1278
Query: 1264 EDFPFALEVQTLPPTCEPKAHTSFQISVNVSYTGSRPA-SNMAIVDVKMVSGFI 1422
E F + V+ E K + + +NV + S P S MA+++V ++SGF+
Sbjct: 1279 EAFDLDVAVK------ENKDDLN-HVDLNVCTSFSGPGRSGMALMEVNLLSGFM 1325
>ref|NP_001153059.1| CD109 antigen isoform 2 precursor [Homo sapiens].
Length = 1428
Score = 242 bits (618), Expect = 6e-64
Identities = 168/473 (35%), Positives = 254/473 (53%), Gaps = 14/473 (2%)
Frame = +1
Query: 46 LSLKLPPNVVEDSARAFFSVLGDLLGSAMRNTQNLLQMPYGCGEQNMVLFAPNIYVLDYL 225
LS PPN V S R + +GD+LG ++ +L++MPYGCGEQNM+ FAPNIY+LDYL
Sbjct: 880 LSFSFPPNTVTGSERVQITAIGDVLGPSINGLASLIRMPYGCGEQNMINFAPNIYILDYL 939
Query: 226 NETQQLTAEIKSKAIRYLNTGYQRQLLYKHYDGSYSTFGEHYGRSEGNTWLTAFVMKTFA 405
+ +QLT +K KA+ ++ GYQR+LLY+ DGS+S FG + G+TWL+AFV++ F
Sbjct: 940 TKKKQLTDNLKEKALSFMRQGYQRELLYQREDGSFSAFGNY--DPSGSTWLSAFVLRCFL 997
Query: 406 QARTYIFIDETHITEALTWLSQKQKDNGCFRSSGSLLNNAIKGGVDDEVTLSAYVTIALL 585
+A YI ID+ + TWL QK NG F G ++++ ++GG VTL+AY+ +LL
Sbjct: 998 EADPYIDIDQNVLHRTYTWLKGHQKSNGEFWDPGRVIHSELQGGNKSPVTLTAYIVTSLL 1057
Query: 586 EIPLAVTHPVVRSALFCLETAWKSAQEGSQG-SHVYTKALLAYAFALAGNQEKKKEVLQS 762
+ V+ ++ LE+ E S+G S YT AL+ YA + G+ K KE L
Sbjct: 1058 GYRKYQPNIDVQESIHFLES------EFSRGISDNYTLALITYALSSVGS-PKAKEALNM 1110
Query: 763 LDAEAVKEGDSIHWTRPQKPEAPVQHFYKPRAPSAEVEMTAYVLLTCLTAQSALSSEDLN 942
L A +EG W E+ + ++PR S ++E+ AY LL+ +SE +
Sbjct: 1111 LTWRAEQEGGMQFWV---SSESKLSDSWQPR--SLDIEVAAYALLSHFL--QFQTSEGIP 1163
Query: 943 LATLIMKWITKQQNSQGGFSSTQDTVVALHALSKYGAATFTRTGKAAEVTIQSTGTFSKK 1122
IM+W+++Q+NS GGF+STQDT VAL ALS++ A T + + + TG S
Sbjct: 1164 ----IMRWLSRQRNSLGGFASTQDTTVALKALSEFAALMNT---ERTNIQVTVTGPSSPS 1216
Query: 1123 FXXXXXXXXXXXXISLPAV-PGEYSITATGKGCVYLQTSLKYNI-----------LPKKE 1266
L V P +I+A G G Q ++ YN+ + +E
Sbjct: 1217 --------------PLAVVQPTAVNISANGFGFAICQLNVVYNVKASGSSRRRRSIQNQE 1262
Query: 1267 DFPFALEVQTLPPTCEPKAHTSFQISVNVSYTGSRPA-SNMAIVDVKMVSGFI 1422
F + V+ E K + + +NV + S P S MA+++V ++SGF+
Sbjct: 1263 AFDLDVAVK------ENKDDLN-HVDLNVCTSFSGPGRSGMALMEVNLLSGFM 1308
>ref|NP_001002029.3| complement C4-B preproprotein [Homo sapiens].
Length = 1744
Score = 152 bits (385), Expect = 6e-37
Identities = 125/388 (32%), Positives = 187/388 (48%), Gaps = 40/388 (10%)
Frame = +1
Query: 64 PNVVEDS-----ARAFFSVLGDLLGS----AMRNTQNLLQMPYGCGEQNMVLFAPNIYVL 216
PN++ D R S D LGS + +LL++P GCGEQ M+ AP +
Sbjct: 966 PNMIPDGDFNSYVRVTASDPLDTLGSEGALSPGGVASLLRLPRGCGEQTMIYLAPTLAAS 1025
Query: 217 DYLNETQQ---LTAEIKSKAIRYLNTGYQRQLLYKHYDGSYSTFGEHYGRSEGN-TWLTA 384
YL++T+Q L E K A+ + GY R ++ DGSY+ + S G+ TWLTA
Sbjct: 1026 RYLDKTEQWSTLPPETKDHAVDLIQKGYMRIQQFRKADGSYAAW-----LSRGSSTWLTA 1080
Query: 385 FVMKTFAQARTYIFIDETHITEALTWLSQKQKDNGCFRSSGSLLNNAIKGGV---DDEVT 555
FV+K + A+ + + E WL +Q+ +G F+ +++ +++GG+ D+ V
Sbjct: 1081 FVLKVLSLAQEQVGGSPEKLQETSNWLLSQQQADGSFQDLSPVIHRSMQGGLVGNDETVA 1140
Query: 556 LSAYVTIALLEIPLAV-----THPVVRSALFCLETA----WKSAQEGSQGSHVYTKALLA 708
L+A+VTIAL LAV P+ + + A + A G G+H A+ A
Sbjct: 1141 LTAFVTIALHH-GLAVFQDEGAEPLKQRVEASISKASSFLGEKASAGLLGAHA--AAITA 1197
Query: 709 YAFALAGNQEKKKEVLQS-LDAEAVKEGDSIHW--------------TRPQKPEAPVQHF 843
YA L + V + L A A + GD+++W P+ P P+
Sbjct: 1198 YALTLTKAPADLRGVAHNNLMAMAQETGDNLYWGSVTGSQSNAVSPTPAPRNPSDPM--- 1254
Query: 844 YKPRAPSAEVEMTAYVLLTCLTAQSALSSEDLNLATLIMKWITKQQNSQGGFSSTQDTVV 1023
P+AP+ +E TAY LL L + D A W+T+Q + QGGF STQDTV+
Sbjct: 1255 --PQAPALWIETTAYALLHLLLHEGKAEMADQAAA-----WLTRQGSFQGGFRSTQDTVI 1307
Query: 1024 ALHALSKYGAATFTRTGKAAEVTIQSTG 1107
AL ALS Y A+ T + VT+ STG
Sbjct: 1308 ALDALSAYWIASHTTEERGLNVTLSSTG 1335
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.317 0.131 0.384
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 63,228,005
Number of extensions: 1749122
Number of successful extensions: 6569
Number of sequences better than 1.0e-05: 18
Number of HSP's gapped: 6498
Number of HSP's successfully gapped: 18
Length of query: 511
Length of database: 18,297,164
Length adjustment: 107
Effective length of query: 404
Effective length of database: 14,770,016
Effective search space: 5967086464
Effective search space used: 5967086464
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007228
(1535 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_783327.2| alpha-2-macroglobulin-P precursor [Mus musculus]. 717 0.0
Alignment gi|NP_032671.2| murinoglobulin-1 precursor [Mus musculus]. 647 0.0
Alignment gi|XP_001480324.2| PREDICTED: murinoglobulin-1-like [Mus muscul... 641 0.0
Alignment gi|XP_922625.4| PREDICTED: murinoglobulin-1-like [Mus musculus]. 641 0.0
Alignment gi|NP_031402.3| alpha-2-macroglobulin precursor [Mus musculus]. 633 0.0
Alignment gi|NP_032672.2| murinoglobulin-2 precursor [Mus musculus]. 596 e-170
Alignment gi|NP_001001179.2| ovostatin homolog precursor [Mus musculus]. 355 4e-98
Alignment gi|NP_694738.1| CD109 antigen precursor [Mus musculus]. 234 1e-61
Alignment gi|XP_978162.1| PREDICTED: complement C4-B-like isoform 5 [Mus ... 147 2e-35
Alignment gi|NP_033910.2| complement C4-B precursor [Mus musculus]. 147 2e-35
>ref|NP_783327.2| alpha-2-macroglobulin-P precursor [Mus musculus].
Length = 1474
Score = 717 bits (1852), Expect = 0.0
Identities = 358/485 (73%), Positives = 412/485 (84%), Gaps = 1/485 (0%)
Frame = +1
Query: 1 FNSLLCPSDAGASEQLSLKLPPNVVEDSARAFFSVLGDLLGSAMRNTQNLLQMPYGCGEQ 180
FNSLLCP+ A SEQ+SLKLP +VVE+SARA +VLGD+LGSAM+NTQ+LL+MPYGCGEQ
Sbjct: 916 FNSLLCPTGAEVSEQISLKLPSDVVEESARASVTVLGDILGSAMQNTQDLLKMPYGCGEQ 975
Query: 181 NMVLFAPNIYVLDYLNETQQLTAEIKSKAIRYLNTGYQRQLLYKHYDGSYSTFGEHYGRS 360
NMVLFAPNIYVLDYLNET+QLT EIK+KAI YLNTGYQRQL YKH DGSYSTFG+ GRS
Sbjct: 976 NMVLFAPNIYVLDYLNETEQLTQEIKTKAITYLNTGYQRQLNYKHRDGSYSTFGDKPGRS 1035
Query: 361 EGNTWLTAFVMKTFAQARTYIFIDETHITEALTWLSQKQKDNGCFRSSGSLLNNAIKGGV 540
NTWLTAFV+K+FAQAR YIFIDE+HIT+ALTWLSQ+QKDNGCFRSSGSLLNNA+KGGV
Sbjct: 1036 HANTWLTAFVLKSFAQARRYIFIDESHITQALTWLSQQQKDNGCFRSSGSLLNNAMKGGV 1095
Query: 541 DDEVTLSAYVTIALLEIPLAVTHPVVRSALFCLETAWKSAQEGSQGSHVYTKALLAYAFA 720
+DEVTLSAY+TIALLE+ L VTHPVVR+ALFCL+TAWKSA+ G+ G+HVYTKALLAYAFA
Sbjct: 1096 EDEVTLSAYITIALLEMSLPVTHPVVRNALFCLDTAWKSARRGASGNHVYTKALLAYAFA 1155
Query: 721 LAGNQEKKKEVLQSLDAEAVKEGDSIHWTRPQKPEAPVQHFYKPRAPSAEVEMTAYVLLT 900
LAGNQ+ KKE+L+SLD EAVKE +S+HWTR QKP P +Y+P+APSAEVEMTAYVLL
Sbjct: 1156 LAGNQDTKKEILKSLDEEAVKEDNSVHWTRAQKPRVPADLWYQPQAPSAEVEMTAYVLLA 1215
Query: 901 CLTAQSALSSEDLNLATLIMKWITKQQNSQGGFSSTQDTVVALHALSKYGAATFTRTGKA 1080
LT + + EDL A LI+KW+TKQQNS GGFSSTQDTVVALHALSKYGAATFTR KA
Sbjct: 1216 YLTTELVPTREDLTAAMLIVKWLTKQQNSHGGFSSTQDTVVALHALSKYGAATFTRAKKA 1275
Query: 1081 AEVTIQSTGTFSKKFXXXXXXXXXXXXISLPAVPGEYSITATGKGCVYLQTSLKYNILPK 1260
A VTIQS+G F KF ++LP VPG+Y+ G+GCVYLQTSLKY++LP+
Sbjct: 1276 AHVTIQSSGAFYTKFQVNNDNQLLLQRVTLPTVPGDYTAKVAGEGCVYLQTSLKYSVLPR 1335
Query: 1261 KEDFPFALEVQTLPPTCEP-KAHTSFQISVNVSYTGSRPASNMAIVDVKMVSGFIPLKPQ 1437
+++FPFAL VQTLP TCE KAHT+FQIS+N+SY GSR SNMAI DVKMVSGFIPLKP
Sbjct: 1336 EKEFPFALVVQTLPGTCEDLKAHTTFQISLNISYIGSRSDSNMAIADVKMVSGFIPLKPT 1395
Query: 1438 *KCLK 1452
K L+
Sbjct: 1396 VKMLE 1400
>ref|NP_032671.2| murinoglobulin-1 precursor [Mus musculus].
Length = 1476
Score = 647 bits (1669), Expect = 0.0
Identities = 325/487 (66%), Positives = 384/487 (78%), Gaps = 1/487 (0%)
Frame = +1
Query: 1 FNSLLCPSDAGASEQLSLKLPPNVVEDSARAFFSVLGDLLGSAMRNTQNLLQMPYGCGEQ 180
F+SL C SDA SE++SL LPP VV+DSARA FSV+GD+L SA+RNTQNLL MPYGCGEQ
Sbjct: 918 FSSLFCASDAEISEKMSLVLPPTVVKDSARAHFSVMGDILSSAIRNTQNLLHMPYGCGEQ 977
Query: 181 NMVLFAPNIYVLDYLNETQQLTAEIKSKAIRYLNTGYQRQLLYKHYDGSYSTFGEHYGRS 360
NMVLFAPNIYVL YLNETQQLT +IK+KA+ +L GYQR+L YKH DGSYS FG+ G
Sbjct: 978 NMVLFAPNIYVLKYLNETQQLTQKIKTKALGFLRAGYQRELNYKHKDGSYSAFGDQNGER 1037
Query: 361 EGNTWLTAFVMKTFAQARTYIFIDETHITEALTWLSQKQKDNGCFRSSGSLLNNAIKGGV 540
EGNTWLTAFV+K+FAQAR +IFIDE+HIT A TWLSQKQKDNGCFRSSGSL NNA+KGGV
Sbjct: 1038 EGNTWLTAFVLKSFAQARAFIFIDESHITHAFTWLSQKQKDNGCFRSSGSLFNNAMKGGV 1097
Query: 541 DDEVTLSAYVTIALLEIPLAVTHPVVRSALFCLETAWKSAQEGSQGSHVYTKALLAYAFA 720
DDE+TLSAY+T+ALLE L THPVV AL CLE++WK+ ++ S VYTKAL+AYAFA
Sbjct: 1098 DDEMTLSAYITMALLESSLPATHPVVSKALSCLESSWKTIEQERNASFVYTKALMAYAFA 1157
Query: 721 LAGNQEKKKEVLQSLDAEAVKEGDSIHWTRPQKPEAPVQHFYKPRAPSAEVEMTAYVLLT 900
LAGNQ K+ E+L+SLD EA+KE +SIHW RPQK H YKP+A SAEVEM AYV+L
Sbjct: 1158 LAGNQNKRDEILKSLDEEAIKENNSIHWKRPQKSRKSEHHLYKPQASSAEVEMNAYVVLA 1217
Query: 901 CLTAQSALSSEDLNLATLIMKWITKQQNSQGGFSSTQDTVVALHALSKYGAATFTRTGKA 1080
LTAQ A S EDL L+ + W+TKQQNS GGFSSTQDTVVAL ALSKYGA TF+R+ K
Sbjct: 1218 RLTAQPAPSPEDLTLSMSTIMWLTKQQNSNGGFSSTQDTVVALDALSKYGAVTFSRSQKT 1277
Query: 1081 AEVTIQSTGTFSKKFXXXXXXXXXXXXISLPAVPGEYSITATGKGCVYLQTSLKYNILPK 1260
VTIQSTG+FS+KF ++LP +PG+Y+I+ +G+GCVY QT L+YN+ +
Sbjct: 1278 TLVTIQSTGSFSQKFQVENSNRLLLQQVALPDIPGDYTISVSGEGCVYAQTMLRYNMHLE 1337
Query: 1261 KEDFPFALEVQTLPPTC-EPKAHTSFQISVNVSYTGSRPASNMAIVDVKMVSGFIPLKPQ 1437
K+ FA+ VQT+P TC PK H SFQIS+ +SYTGSRPASNM I DVKM+SGFIPLKP
Sbjct: 1338 KQLSAFAIWVQTVPLTCNNPKGHNSFQISLEISYTGSRPASNMVIADVKMLSGFIPLKPT 1397
Query: 1438 *KCLKDL 1458
K L+ L
Sbjct: 1398 VKKLERL 1404
>ref|XP_001480324.2| PREDICTED: murinoglobulin-1-like [Mus musculus].
Length = 1472
Score = 641 bits (1654), Expect = 0.0
Identities = 320/487 (65%), Positives = 384/487 (78%), Gaps = 1/487 (0%)
Frame = +1
Query: 1 FNSLLCPSDAGASEQLSLKLPPNVVEDSARAFFSVLGDLLGSAMRNTQNLLQMPYGCGEQ 180
F+SLLC SDA SE+LSL LPP VV+DSARA FSV+GD+L A++NTQNLL MPYGCGEQ
Sbjct: 918 FSSLLCASDAEISEKLSLVLPPTVVKDSARAHFSVMGDVLSPAIKNTQNLLHMPYGCGEQ 977
Query: 181 NMVLFAPNIYVLDYLNETQQLTAEIKSKAIRYLNTGYQRQLLYKHYDGSYSTFGEHYGRS 360
NMVLFAPNIYVL YLNET QLT IK+KA+ +L GYQR+L YKH DGSYS FG+ G
Sbjct: 978 NMVLFAPNIYVLKYLNETHQLTQTIKTKALGFLRAGYQRELNYKHKDGSYSAFGDQNGER 1037
Query: 361 EGNTWLTAFVMKTFAQARTYIFIDETHITEALTWLSQKQKDNGCFRSSGSLLNNAIKGGV 540
EGNTWLTAFV+K+FAQAR +IFIDE+HIT +LTWLSQ+QKDNGCF+SSGSL NNA+KGGV
Sbjct: 1038 EGNTWLTAFVLKSFAQARAFIFIDESHITHSLTWLSQQQKDNGCFQSSGSLFNNAMKGGV 1097
Query: 541 DDEVTLSAYVTIALLEIPLAVTHPVVRSALFCLETAWKSAQEGSQGSHVYTKALLAYAFA 720
DDE+TLSAY+T+ALLE L THPVV AL CLE +WK+ ++ S VYTKAL+AYAFA
Sbjct: 1098 DDEMTLSAYITMALLESSLPATHPVVSKALSCLELSWKTIEQERNASFVYTKALMAYAFA 1157
Query: 721 LAGNQEKKKEVLQSLDAEAVKEGDSIHWTRPQKPEAPVQHFYKPRAPSAEVEMTAYVLLT 900
L GNQ+K+ E+L+SLD EA+KE +SIHW RPQKP H YKP+A SAEVEM AYV+L
Sbjct: 1158 LVGNQDKRDEILKSLDEEAIKENNSIHWKRPQKPRKSEHHLYKPQASSAEVEMNAYVVLA 1217
Query: 901 CLTAQSALSSEDLNLATLIMKWITKQQNSQGGFSSTQDTVVALHALSKYGAATFTRTGKA 1080
LTAQ A S EDL L+ + W+T+QQNS GGFSSTQDTVVAL ALSKY A TF+R+ K
Sbjct: 1218 RLTAQPAPSPEDLTLSMSTIMWLTEQQNSNGGFSSTQDTVVALDALSKYKAVTFSRSQKT 1277
Query: 1081 AEVTIQSTGTFSKKFXXXXXXXXXXXXISLPAVPGEYSITATGKGCVYLQTSLKYNILPK 1260
VTIQS+G+FS+KF ++LP +PG+Y+++ +G+GCVY QT+L+YNI +
Sbjct: 1278 TLVTIQSSGSFSQKFQVENSNRLLLQQVALPDIPGDYTMSVSGEGCVYAQTTLRYNIHLE 1337
Query: 1261 KEDFPFALEVQTLPPTC-EPKAHTSFQISVNVSYTGSRPASNMAIVDVKMVSGFIPLKPQ 1437
K+ FAL VQT+P TC +PK H SFQIS+ +SYTGSRPASNM I DVKM+SGFIPLKP
Sbjct: 1338 KQPSAFALRVQTVPLTCNDPKGHNSFQISLEISYTGSRPASNMVIADVKMLSGFIPLKPT 1397
Query: 1438 *KCLKDL 1458
K L+ L
Sbjct: 1398 VKKLESL 1404
>ref|XP_922625.4| PREDICTED: murinoglobulin-1-like [Mus musculus].
Length = 1472
Score = 641 bits (1654), Expect = 0.0
Identities = 320/487 (65%), Positives = 384/487 (78%), Gaps = 1/487 (0%)
Frame = +1
Query: 1 FNSLLCPSDAGASEQLSLKLPPNVVEDSARAFFSVLGDLLGSAMRNTQNLLQMPYGCGEQ 180
F+SLLC SDA SE+LSL LPP VV+DSARA FSV+GD+L A++NTQNLL MPYGCGEQ
Sbjct: 918 FSSLLCASDAEISEKLSLVLPPTVVKDSARAHFSVMGDVLSPAIKNTQNLLHMPYGCGEQ 977
Query: 181 NMVLFAPNIYVLDYLNETQQLTAEIKSKAIRYLNTGYQRQLLYKHYDGSYSTFGEHYGRS 360
NMVLFAPNIYVL YLNET QLT IK+KA+ +L GYQR+L YKH DGSYS FG+ G
Sbjct: 978 NMVLFAPNIYVLKYLNETHQLTQTIKTKALGFLRAGYQRELNYKHKDGSYSAFGDQNGER 1037
Query: 361 EGNTWLTAFVMKTFAQARTYIFIDETHITEALTWLSQKQKDNGCFRSSGSLLNNAIKGGV 540
EGNTWLTAFV+K+FAQAR +IFIDE+HIT +LTWLSQ+QKDNGCF+SSGSL NNA+KGGV
Sbjct: 1038 EGNTWLTAFVLKSFAQARAFIFIDESHITHSLTWLSQQQKDNGCFQSSGSLFNNAMKGGV 1097
Query: 541 DDEVTLSAYVTIALLEIPLAVTHPVVRSALFCLETAWKSAQEGSQGSHVYTKALLAYAFA 720
DDE+TLSAY+T+ALLE L THPVV AL CLE +WK+ ++ S VYTKAL+AYAFA
Sbjct: 1098 DDEMTLSAYITMALLESSLPATHPVVSKALSCLELSWKTIEQERNASFVYTKALMAYAFA 1157
Query: 721 LAGNQEKKKEVLQSLDAEAVKEGDSIHWTRPQKPEAPVQHFYKPRAPSAEVEMTAYVLLT 900
L GNQ+K+ E+L+SLD EA+KE +SIHW RPQKP H YKP+A SAEVEM AYV+L
Sbjct: 1158 LVGNQDKRDEILKSLDEEAIKENNSIHWKRPQKPRKSEHHLYKPQASSAEVEMNAYVVLA 1217
Query: 901 CLTAQSALSSEDLNLATLIMKWITKQQNSQGGFSSTQDTVVALHALSKYGAATFTRTGKA 1080
LTAQ A S EDL L+ + W+T+QQNS GGFSSTQDTVVAL ALSKY A TF+R+ K
Sbjct: 1218 RLTAQPAPSPEDLTLSMSTIMWLTEQQNSNGGFSSTQDTVVALDALSKYKAVTFSRSQKT 1277
Query: 1081 AEVTIQSTGTFSKKFXXXXXXXXXXXXISLPAVPGEYSITATGKGCVYLQTSLKYNILPK 1260
VTIQS+G+FS+KF ++LP +PG+Y+++ +G+GCVY QT+L+YNI +
Sbjct: 1278 TLVTIQSSGSFSQKFQVENSNRLLLQQVALPDIPGDYTMSVSGEGCVYAQTTLRYNIHLE 1337
Query: 1261 KEDFPFALEVQTLPPTC-EPKAHTSFQISVNVSYTGSRPASNMAIVDVKMVSGFIPLKPQ 1437
K+ FAL VQT+P TC +PK H SFQIS+ +SYTGSRPASNM I DVKM+SGFIPLKP
Sbjct: 1338 KQPSAFALRVQTVPLTCNDPKGHNSFQISLEISYTGSRPASNMVIADVKMLSGFIPLKPT 1397
Query: 1438 *KCLKDL 1458
K L+ L
Sbjct: 1398 VKKLESL 1404
>ref|NP_031402.3| alpha-2-macroglobulin precursor [Mus musculus].
Length = 1495
Score = 633 bits (1633), Expect = 0.0
Identities = 335/496 (67%), Positives = 388/496 (78%), Gaps = 11/496 (2%)
Frame = +1
Query: 1 FNSLLCPSDAGASEQLSLKLPPNVVEDSARAFFSVLGDLLGSAMRNTQNLLQMPYGCGEQ 180
+N+LLCP D + SL+LPPNVVE SARA SVLGD+LGSAM+N QNLLQMPYGCGEQ
Sbjct: 928 YNTLLCPQDTELQDNWSLELPPNVVEGSARATHSVLGDILGSAMQNLQNLLQMPYGCGEQ 987
Query: 181 NMVLFAPNIYVLDYLNETQQLTAEIKSKAIRYLNTGYQRQLLYKHYDGSYSTFGEH-YGR 357
NMVLF PNIYVL+YLNETQQLT IKSKAI YL +GYQRQL Y+H DGSYSTFG H G
Sbjct: 988 NMVLFVPNIYVLNYLNETQQLTEAIKSKAINYLISGYQRQLNYQHSDGSYSTFGNHGGGN 1047
Query: 358 SEGNTWLTAFVMKTFAQARTYIFIDETHITEALTWLSQKQKDNGCFRSSGSLLNNAIKGG 537
+ GNTWLTAFV+K FAQA+++IFI++THIT A WLS KQK+NGCF+ SG LLNNA+KGG
Sbjct: 1048 TPGNTWLTAFVLKAFAQAQSHIFIEKTHITNAFNWLSMKQKENGCFQQSGYLLNNAMKGG 1107
Query: 538 VDDEVTLSAYVTIALLEIPLAVTHPVVRSALFCLETAWKSAQEGSQGSHVYTKALLAYAF 717
VDDEVTLSAY+TIALLE+PL VTH VR+ALFCLETAW S + SQ SHVYTKALLAYAF
Sbjct: 1108 VDDEVTLSAYITIALLEMPLPVTHSAVRNALFCLETAWASISQ-SQESHVYTKALLAYAF 1166
Query: 718 ALAGNQEKKKEVLQSLDAEAVKEGDSIHWTRP---QKPEAPVQHFYKPRAPSAEVEMTAY 888
ALAGN+ K+ E+L+SL+ +AVKE DS+HW RP QK +A FY+PRAPSAEVEMTAY
Sbjct: 1167 ALAGNKAKRSELLESLNKDAVKEEDSLHWQRPGDVQKVKA--LSFYQPRAPSAEVEMTAY 1224
Query: 889 VLLTCLTAQSA-----LSSEDLNLATLIMKWITKQQNSQGGFSSTQDTVVALHALSKYGA 1053
VLL LT++S+ LSS DL+ A+ I+KWI+KQQNS GGFSSTQDTVVAL ALSKYGA
Sbjct: 1225 VLLAYLTSESSRPTRDLSSSDLSTASKIVKWISKQQNSHGGFSSTQDTVVALQALSKYGA 1284
Query: 1054 ATFTRTGKAAEVTIQSTGTFSKKFXXXXXXXXXXXXISLPAVPGEYSITATGKGCVYLQT 1233
ATFTR+ K VTI+S+GTFSK F + LP +PG Y +G GCVYLQT
Sbjct: 1285 ATFTRSQKEVLVTIESSGTFSKTFHVNSGNRLLLQEVRLPDLPGNYVTKGSGSGCVYLQT 1344
Query: 1234 SLKYNILPKKE-DFPFALEVQTLPPTCEPKA-HTSFQISVNVSYTGSRPASNMAIVDVKM 1407
SLKYNILP + PFAL+V TLP + H +FQI +NVSYTG RP+SNM IVDVKM
Sbjct: 1345 SLKYNILPVADGKAPFALQVNTLPLNFDKAGDHRTFQIRINVSYTGERPSSNMVIVDVKM 1404
Query: 1408 VSGFIPLKPQ*KCLKD 1455
VSGFIP+KP K L+D
Sbjct: 1405 VSGFIPMKPSVKKLQD 1420
>ref|NP_032672.2| murinoglobulin-2 precursor [Mus musculus].
Length = 1451
Score = 596 bits (1537), Expect = e-170
Identities = 303/487 (62%), Positives = 364/487 (74%), Gaps = 1/487 (0%)
Frame = +1
Query: 1 FNSLLCPSDAGASEQLSLKLPPNVVEDSARAFFSVLGDLLGSAMRNTQNLLQMPYGCGEQ 180
FNSL C SDA SE++SL LPP VV+DSARA FSV+GD+L SA++NTQNLL MPYGCGEQ
Sbjct: 918 FNSLFCASDAEISEKMSLVLPPTVVKDSARAHFSVMGDILSSAIKNTQNLLHMPYGCGEQ 977
Query: 181 NMVLFAPNIYVLDYLNETQQLTAEIKSKAIRYLNTGYQRQLLYKHYDGSYSTFGEHYGRS 360
NMVLFAPNIYVL YL++TQQLT +IK+KA+ +L GYQR+L YKH DGSYS FG+ G
Sbjct: 978 NMVLFAPNIYVLKYLDKTQQLTQKIKTKALGFLRAGYQRELNYKHKDGSYSAFGDQNGER 1037
Query: 361 EGNTWLTAFVMKTFAQARTYIFIDETHITEALTWLSQKQKDNGCFRSSGSLLNNAIKGGV 540
EGNTWLTAFV+K+FAQAR +IFIDE+HIT A TWLSQ+QKDNGCFRSSGSL +N IK
Sbjct: 1038 EGNTWLTAFVLKSFAQARAFIFIDESHITHAFTWLSQQQKDNGCFRSSGSLFHNDIK--- 1094
Query: 541 DDEVTLSAYVTIALLEIPLAVTHPVVRSALFCLETAWKSAQEGSQGSHVYTKALLAYAFA 720
HPVV AL CLE++WK+ ++G + VYTKAL+AYAFA
Sbjct: 1095 ----------------------HPVVSKALSCLESSWKTIEQGRNANFVYTKALMAYAFA 1132
Query: 721 LAGNQEKKKEVLQSLDAEAVKEGDSIHWTRPQKPEAPVQHFYKPRAPSAEVEMTAYVLLT 900
LAGNQ+K+ E+L+SLD EA+KE +SIHW RPQKP + YKP+A S EVEM AYV+L
Sbjct: 1133 LAGNQDKRNEILKSLDEEAIKEDNSIHWERPQKPRKSEHNLYKPQASSVEVEMNAYVVLA 1192
Query: 901 CLTAQSALSSEDLNLATLIMKWITKQQNSQGGFSSTQDTVVALHALSKYGAATFTRTGKA 1080
LTAQ A S EDL L+ + W+TKQQNS GGFSSTQDTVVAL ALSKYGA TF+R K
Sbjct: 1193 RLTAQPAPSPEDLTLSRSTIMWLTKQQNSNGGFSSTQDTVVALDALSKYGAVTFSRRQKT 1252
Query: 1081 AEVTIQSTGTFSKKFXXXXXXXXXXXXISLPAVPGEYSITATGKGCVYLQTSLKYNILPK 1260
+ VTIQSTG+FS+KF + LP +PG+Y+I+ +G+GCVY QT+L+YN+ +
Sbjct: 1253 SLVTIQSTGSFSQKFQVENSNCLLLQQVPLPDIPGDYTISVSGEGCVYAQTTLRYNMHLE 1312
Query: 1261 KEDFPFALEVQTLPPTC-EPKAHTSFQISVNVSYTGSRPASNMAIVDVKMVSGFIPLKPQ 1437
K+ FAL VQT+P TC PK H SFQIS+ +SYTGSRPASNM I DVKM+SGFIPLKP
Sbjct: 1313 KQQSAFALRVQTVPLTCNNPKGHNSFQISLEISYTGSRPASNMVIADVKMLSGFIPLKPT 1372
Query: 1438 *KCLKDL 1458
K L+ L
Sbjct: 1373 VKKLERL 1379
>ref|NP_001001179.2| ovostatin homolog precursor [Mus musculus].
Length = 1456
Score = 355 bits (912), Expect = 4e-98
Identities = 195/476 (40%), Positives = 287/476 (60%), Gaps = 3/476 (0%)
Frame = +1
Query: 10 LLCPSDAGASEQLSLKLPPNVVEDSARAFFSVLGDLLGSAMRNTQNLLQMPYGCGEQNMV 189
L+CP AS+Q L+LP NVVE S R+F +++GD+LG AM+N ++LLQMPYGCGEQN+
Sbjct: 917 LICPKGTKASKQTLLELPSNVVEGSVRSFVTIVGDILGVAMQNLESLLQMPYGCGEQNIA 976
Query: 190 LFAPNIYVLDYLNETQQLTAEIKSKAIRYLNTGYQRQLLYKHYDGSYSTFGEHYGRSEGN 369
A ++Y+LDYL T QLT E+KSKA R L+ GYQ L +K+YDGSY F + EG+
Sbjct: 977 QLASDVYILDYLKATDQLTEELKSKAQRLLSNGYQNHLSFKNYDGSYDVFCQ--SNQEGS 1034
Query: 370 TWLTAFVMKTFAQARTYIFIDETHITEALTWLSQKQKDNGCFRSSGSLLNNAIKG--GVD 543
TWL+A KT + + YIFI+ET + L WL +KQK NGCFR ++ A +G G
Sbjct: 1035 TWLSALSFKTVEKMKEYIFIEETVPKQTLIWLVKKQKSNGCFRRDEKHVDTAQEGREGDQ 1094
Query: 544 DEVTLSAYVTIALLEIPLAVTHPVVRSALFCLETAWKSAQEGSQGSHVYTKALLAYAFAL 723
+++ L+AYV LE+ L + P +R+ L+CLE A+ + ++ YT+A+LAY FAL
Sbjct: 1095 EDIALTAYVVGVFLEVGLNASFPALRNGLYCLEEAFSNGV-----TNGYTQAILAYVFAL 1149
Query: 724 AGNQEKKKEVLQSLDAEAVKEGDSIHWTRPQKPEAPVQHFYKPRAPSAEVEMTAYVLLTC 903
AG +++ K +L LD A K + I+W R +KPE + P A S E E T YVLL
Sbjct: 1150 AGKEQQAKSLLSILDKSATKTNNMIYWERDEKPETDNSPSFIPSALSGETEKTCYVLLAV 1209
Query: 904 LTAQSALSSEDLNLATLIMKWITKQQNSQGGFSSTQDTVVALHALSKYGAATFTRTGKAA 1083
L+ ++DL+ A+ I++W+ ++ NS GGFS+ QDT V L AL++Y TG
Sbjct: 1210 LSQ----DTQDLDYASKIVQWLAQRMNSHGGFSAMQDTTVCLLALTQY----MKLTGSNP 1261
Query: 1084 EVTIQSTGTFSKK-FXXXXXXXXXXXXISLPAVPGEYSITATGKGCVYLQTSLKYNILPK 1260
+ TI + S++ F + +Y++ G GC ++Q +L+YN+
Sbjct: 1262 QNTITLSSEESEEVFYVNRNKRLLVQHSKVSKGHQQYTVDVEGDGCSFIQATLRYNVPLP 1321
Query: 1261 KEDFPFALEVQTLPPTCEPKAHTSFQISVNVSYTGSRPASNMAIVDVKMVSGFIPL 1428
KE F+L V+T + T F+++V ++YTG+R +S +VDVKM+SGF P+
Sbjct: 1322 KEASGFSLSVKTGKSNSSDEFQTKFELTVTLTYTGARESSVTVLVDVKMLSGFTPV 1377
>ref|NP_694738.1| CD109 antigen precursor [Mus musculus].
Length = 1442
Score = 234 bits (598), Expect = 1e-61
Identities = 160/468 (34%), Positives = 252/468 (53%), Gaps = 8/468 (1%)
Frame = +1
Query: 40 EQLSLKLPPNVVEDSARAFFSVLGDLLGSAMRNTQNLLQMPYGCGEQNMVLFAPNIYVLD 219
+ + PP+ V S R + +GD+LGS++ +L++MPYGCGEQNM+ FAPNIY+LD
Sbjct: 880 QSMRFSFPPDTVIGSERVQITAIGDILGSSINGLSSLIRMPYGCGEQNMIYFAPNIYILD 939
Query: 220 YLNETQQLTAEIKSKAIRYLNTGYQRQLLYKHYDGSYSTFGEHYGRSEGNTWLTAFVMKT 399
YL + +QLT +K KA+ Y+ GYQR+LLY+ DGS+S FG+ S G+TWL+AFV++
Sbjct: 940 YLTKQKQLTVNLKEKALSYMRQGYQRELLYQREDGSFSAFGDI--DSSGSTWLSAFVLRC 997
Query: 400 FAQARTYIFIDETHITEALTWLSQKQKDNGCFRSSGSLLNNAIKGGVDDEVTLSAYVTIA 579
F +A YI ID+ + TWL+ +K NG F G ++++ ++GG VTL+AY+ +
Sbjct: 998 FLEADYYIDIDQDVLHRTYTWLNAHKKFNGEFWEPGRVIHSELQGGTKSPVTLTAYIVTS 1057
Query: 580 LLEIPLAVTHPVVRSALFCLETAWKSAQEGSQG-SHVYTKALLAYAFALAGNQEKKKEVL 756
+L + V+ ++ LE E S+G S YT A+++YA + G+ K +E L
Sbjct: 1058 VLGYKKYQPNIDVQDSIKFLEF------EFSRGISDNYTLAIISYALSTVGS-PKAEEAL 1110
Query: 757 QSLDAEAVKEGDSIHWTRPQKPEAPVQHFYKPRAPSAEVEMTAYVLLTCLTAQSALSSED 936
L + KEGD+ W + ++PR S ++E+ AY LL A +
Sbjct: 1111 NLLMQRSEKEGDTQFWL---SSGPALSGSWQPR--SVDIEIAAYALL-------AHTLHH 1158
Query: 937 LNLATLIMKWITKQQNSQGGFSSTQDTVVALHALSKYGAATFTRTGKAAEVTIQSTG-TF 1113
++ +M+W+ +Q+NS GGF STQDTVVAL ALS++ A + ++T+ G
Sbjct: 1159 VSEGIPVMRWLIQQRNSLGGFVSTQDTVVALKALSEFSALVH-KENTDIQLTVTGPGIPR 1217
Query: 1114 SKKFXXXXXXXXXXXXISLPAV-PGEYSITATGKGCVYLQTSLKYNI----LPKKEDFPF 1278
S F L A+ P +++A G G Q ++ YN+ K+
Sbjct: 1218 SIHFRIDSQNLFLLHQEELHALDPITVNVSAHGSGFAICQLNVDYNVKGSGSSKRRRSTE 1277
Query: 1279 ALEVQTLPPTCEPKAHTS-FQISVNVSYTGSRPASNMAIVDVKMVSGF 1419
EV L + S ++V S+ GS + M +++V ++SGF
Sbjct: 1278 NQEVFDLDVIVNNEDDISHLNLNVCTSHLGSE-RTGMVLMEVNLLSGF 1324
>ref|XP_978162.1| PREDICTED: complement C4-B-like isoform 5 [Mus musculus].
Length = 1738
Score = 147 bits (371), Expect = 2e-35
Identities = 111/347 (31%), Positives = 167/347 (48%), Gaps = 26/347 (7%)
Frame = +1
Query: 145 NLLQMPYGCGEQNMVLFAPNIYVLDYLNETQQ---LTAEIKSKAIRYLNTGYQRQLLYKH 315
+LL++P GC EQ M+ AP + +YL+ T+Q L+ E K A+ + GY R ++
Sbjct: 998 SLLRLPQGCAEQTMIYLAPTLTASNYLDRTEQWSKLSPETKDHAVDLIQKGYMRIQQFRK 1057
Query: 316 YDGSYSTFGEHYGRSEGNTWLTAFVMKTFAQARTYIFIDETHITEALTWLSQKQKDNGCF 495
DGS+ + + +TWLTAFV+K + A+ + + E +WL +Q +G F
Sbjct: 1058 NDGSFGAWLHR----DSSTWLTAFVLKILSLAQEQVGNSPEKLQETASWLLAQQLGDGSF 1113
Query: 496 RSSGSLLNNAIKGGV---DDEVTLSAYVTIAL---LEI-----PLAVTHPVVRSALFCLE 642
+++ A++GG+ D+ V L+A+V IAL L++ + + V S
Sbjct: 1114 HDPCPVIHRAMQGGLVGSDETVALTAFVVIALHHGLDVFQDDDAKQLKNRVEASITKANS 1173
Query: 643 TAWKSAQEGSQGSHVYTKALLAYAFALAGNQEKKKEVLQ-SLDAEAVKEGDSIHW----- 804
+ A G G+H A+ AYA L E + V SL A A + G+ ++W
Sbjct: 1174 FLGQKASAGLLGAHA--AAITAYALTLTKASEDLRNVAHNSLMAMAEETGEHLYWGLVLG 1231
Query: 805 ------TRPQKPEAPVQHFYKPRAPSAEVEMTAYVLLTCLTAQSALSSEDLNLATLIMKW 966
RP P +P + P+AP+ +E TAY LL L L +A W
Sbjct: 1232 SQDKVVLRPTAPRSPTEPV--PQAPALWIETTAYALLHLL-----LREGKGKMADKAASW 1284
Query: 967 ITKQQNSQGGFSSTQDTVVALHALSKYGAATFTRTGKAAEVTIQSTG 1107
+T Q + G F STQDTVV L ALS Y A+ T KA VT+ S G
Sbjct: 1285 LTHQGSFHGAFRSTQDTVVTLDALSAYWIASHTTEEKALNVTLSSMG 1331
>ref|NP_033910.2| complement C4-B precursor [Mus musculus].
Length = 1738
Score = 147 bits (371), Expect = 2e-35
Identities = 111/347 (31%), Positives = 167/347 (48%), Gaps = 26/347 (7%)
Frame = +1
Query: 145 NLLQMPYGCGEQNMVLFAPNIYVLDYLNETQQ---LTAEIKSKAIRYLNTGYQRQLLYKH 315
+LL++P GC EQ M+ AP + +YL+ T+Q L+ E K A+ + GY R ++
Sbjct: 998 SLLRLPQGCAEQTMIYLAPTLTASNYLDRTEQWSKLSPETKDHAVDLIQKGYMRIQQFRK 1057
Query: 316 YDGSYSTFGEHYGRSEGNTWLTAFVMKTFAQARTYIFIDETHITEALTWLSQKQKDNGCF 495
DGS+ + + +TWLTAFV+K + A+ + + E +WL +Q +G F
Sbjct: 1058 NDGSFGAWLHR----DSSTWLTAFVLKILSLAQEQVGNSPEKLQETASWLLAQQLGDGSF 1113
Query: 496 RSSGSLLNNAIKGGV---DDEVTLSAYVTIAL---LEI-----PLAVTHPVVRSALFCLE 642
+++ A++GG+ D+ V L+A+V IAL L++ + + V S
Sbjct: 1114 HDPCPVIHRAMQGGLVGSDETVALTAFVVIALHHGLDVFQDDDAKQLKNRVEASITKANS 1173
Query: 643 TAWKSAQEGSQGSHVYTKALLAYAFALAGNQEKKKEVLQ-SLDAEAVKEGDSIHW----- 804
+ A G G+H A+ AYA L E + V SL A A + G+ ++W
Sbjct: 1174 FLGQKASAGLLGAHA--AAITAYALTLTKASEDLRNVAHNSLMAMAEETGEHLYWGLVLG 1231
Query: 805 ------TRPQKPEAPVQHFYKPRAPSAEVEMTAYVLLTCLTAQSALSSEDLNLATLIMKW 966
RP P +P + P+AP+ +E TAY LL L L +A W
Sbjct: 1232 SQDKVVLRPTAPRSPTEPV--PQAPALWIETTAYALLHLL-----LREGKGKMADKAASW 1284
Query: 967 ITKQQNSQGGFSSTQDTVVALHALSKYGAATFTRTGKAAEVTIQSTG 1107
+T Q + G F STQDTVV L ALS Y A+ T KA VT+ S G
Sbjct: 1285 LTHQGSFHGAFRSTQDTVVTLDALSAYWIASHTTEEKALNVTLSSMG 1331
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.317 0.131 0.384
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 53,720,547
Number of extensions: 1476181
Number of successful extensions: 5193
Number of sequences better than 1.0e-05: 14
Number of HSP's gapped: 5147
Number of HSP's successfully gapped: 14
Length of query: 511
Length of database: 15,617,559
Length adjustment: 106
Effective length of query: 405
Effective length of database: 12,433,743
Effective search space: 5035665915
Effective search space used: 5035665915
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007228
(1535 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_001925235.3| PREDICTED: LOW QUALITY PROTEIN: alpha-2-macr... 918 0.0
Alignment gi|XP_001925210.2| PREDICTED: alpha-2-macroglobulin [Sus scrofa]. 620 e-178
Alignment gi|XP_001925373.3| PREDICTED: alpha-2-macroglobulin-like protei... 327 1e-89
Alignment gi|XP_003123534.2| PREDICTED: c3 and PZP-like alpha-2-macroglob... 271 7e-73
Alignment gi|XP_003355629.1| PREDICTED: ovostatin homolog 2-like, partial... 243 3e-64
Alignment gi|NP_001116561.1| complement C4 [Sus scrofa]. 150 1e-36
Alignment gi|XP_001927580.2| PREDICTED: CD109 antigen isoform 1 [Sus scro... 145 8e-35
Alignment gi|NP_999174.1| complement C3 [Sus scrofa]. 128 7e-30
Alignment gi|NP_001001646.1| complement C5 [Sus scrofa]. 97 3e-20
Alignment gi|XP_003354119.1| PREDICTED: complement C3-like [Sus scrofa]. 86 6e-17
>ref|XP_001925235.3| PREDICTED: LOW QUALITY PROTEIN: alpha-2-macroglobulin [Sus scrofa].
Length = 1476
Score = 918 bits (2372), Expect = 0.0
Identities = 465/484 (96%), Positives = 468/484 (96%)
Frame = +1
Query: 1 FNSLLCPSDAGASEQLSLKLPPNVVEDSARAFFSVLGDLLGSAMRNTQNLLQMPYGCGEQ 180
FNSLLCPSDAGASEQLSLKLPPNVVEDSARAFFSVLGDLLGSAMRNTQNLLQMPYGCGEQ
Sbjct: 919 FNSLLCPSDAGASEQLSLKLPPNVVEDSARAFFSVLGDLLGSAMRNTQNLLQMPYGCGEQ 978
Query: 181 NMVLFAPNIYVLDYLNETQQLTAEIKSKAIRYLNTGYQRQLLYKHYDGSYSTFGEHYGRS 360
NMVLFAPNIYVLDYLNETQQLTAEIKSKAIRYLNTGYQRQLLYKHYDGSYSTFGEHYGRS
Sbjct: 979 NMVLFAPNIYVLDYLNETQQLTAEIKSKAIRYLNTGYQRQLLYKHYDGSYSTFGEHYGRS 1038
Query: 361 EGNTWLTAFVMKTFAQARTYIFIDETHITEALTWLSQKQKDNGCFRSSGSLLNNAIKGGV 540
EGNTWLTAFVMKTFAQARTYIFIDETHITEALTWLSQKQKDNGCFRSSGSLLNNAIKGGV
Sbjct: 1039 EGNTWLTAFVMKTFAQARTYIFIDETHITEALTWLSQKQKDNGCFRSSGSLLNNAIKGGV 1098
Query: 541 DDEVTLSAYVTIALLEIPLAVTHPVVRSALFCLETAWKSAQEGSQGSHVYTKALLAYAFA 720
DDEVTLSAYVTIALLEIPLAVTHPVVRSALFCLETAWKSAQEGSQGSHVYTKALLAYAFA
Sbjct: 1099 DDEVTLSAYVTIALLEIPLAVTHPVVRSALFCLETAWKSAQEGSQGSHVYTKALLAYAFA 1158
Query: 721 LAGNQEKKKEVLQSLDAEAVKEGDSIHWTRPQKPEAPVQHFYKPRAPSAEVEMTAYVLLT 900
LAGNQEKKKEVLQSLDAEAVKEGDSIHWTRP+KPEAPVQHFYKPRAPSAEVEMTAYVLLT
Sbjct: 1159 LAGNQEKKKEVLQSLDAEAVKEGDSIHWTRPRKPEAPVQHFYKPRAPSAEVEMTAYVLLT 1218
Query: 901 CLTAQSALSSEDLNLATLIMKWITKQQNSQGGFSSTQDTVVALHALSKYGAATFTRTGKA 1080
CLTAQSALSSEDLNLATLIMKWITKQQNSQGGFSSTQDTVVALHALSKYGAATFTRTGKA
Sbjct: 1219 CLTAQSALSSEDLNLATLIMKWITKQQNSQGGFSSTQDTVVALHALSKYGAATFTRTGKA 1278
Query: 1081 AEVTIQSTGTFSKKFXXXXXXXXXXXXISLPAVPGEYSITATGKGCVYLQTSLKYNILPK 1260
AEVTIQSTGTFSKKF ISLPAVPGEYSITATGKGCVYLQTSLKYNILPK
Sbjct: 1279 AEVTIQSTGTFSKKFQVNNDNLLLLQQISLPAVPGEYSITATGKGCVYLQTSLKYNILPK 1338
Query: 1261 KEDFPFALEVQTLPPTCEPKAHTSFQISVNVSYTGSRPASNMAIVDVKMVSGFIPLKPQ* 1440
KEDFPFALEVQTLPPTCEPKAHTSFQISVNVSYTGSRPAS+MAIVDVKMVSGFI LKP
Sbjct: 1339 KEDFPFALEVQTLPPTCEPKAHTSFQISVNVSYTGSRPASHMAIVDVKMVSGFIXLKPTV 1398
Query: 1441 KCLK 1452
K L+
Sbjct: 1399 KMLE 1402
>ref|XP_001925210.2| PREDICTED: alpha-2-macroglobulin [Sus scrofa].
Length = 1490
Score = 620 bits (1599), Expect = e-178
Identities = 315/487 (64%), Positives = 383/487 (78%), Gaps = 2/487 (0%)
Frame = +1
Query: 1 FNSLLCPSDAGASEQLSLKLPPNVVEDSARAFFSVLGDLLGSAMRNTQNLLQMPYGCGEQ 180
FN+L+C S+ G + SLKLP +VVE SARA ++VLGD+L SAM+N QNL+QMPYGCGEQ
Sbjct: 931 FNTLVCASETGEPKYFSLKLPSDVVEGSARATYTVLGDILSSAMQNLQNLVQMPYGCGEQ 990
Query: 181 NMVLFAPNIYVLDYLNETQQLTAEIKSKAIRYLNTGYQRQLLYKHYDGSYSTFGEHYGRS 360
NMV F PNIYVL+YL ETQQLT +IKSKAI YL +GYQRQL YKH DGSYSTFGE G S
Sbjct: 991 NMVRFVPNIYVLNYLKETQQLTEKIKSKAISYLVSGYQRQLNYKHSDGSYSTFGERGGGS 1050
Query: 361 EGNTWLTAFVMKTFAQARTYIFIDETHITEALTWLSQKQKDNGCFRSSGSLLNNAIKGGV 540
+GNTWLTAFV+K+F+QAR YIF++++HI ++ WLSQKQK+NGCF+ SGSL NNAIKGGV
Sbjct: 1051 QGNTWLTAFVLKSFSQARAYIFVEDSHIQDSRNWLSQKQKENGCFQRSGSLFNNAIKGGV 1110
Query: 541 DDEVTLSAYVTIALLEIPLAVTHPVVRSALFCLETAWKSAQEGSQGSHVYTKALLAYAFA 720
DDEVTLSAY+TIALLE+PL VTHPVV +AL CLE AW+S E + G+ VYTKALLAYAF
Sbjct: 1111 DDEVTLSAYITIALLEMPLPVTHPVVHNALLCLEKAWESISE-APGNLVYTKALLAYAFT 1169
Query: 721 LAGNQEKKKEVLQSLDAEAVKEGDSIHWTRPQKPEAPVQHFYKPRAPSAEVEMTAYVLLT 900
LAGNQ K+KE+L+SLD EA+K DSIHW RP+K + + Y+PRAPS +VEMT+Y+LL
Sbjct: 1170 LAGNQAKRKELLESLDKEAIKTEDSIHWQRPEKSQES-EFGYQPRAPSVDVEMTSYLLLA 1228
Query: 901 CLTAQSALSSEDLNLATLIMKWITKQQNSQGGFSSTQDTVVALHALSKYGAATFTRTGKA 1080
+TAQ A SSEDL++A+ ++KWITKQQN GGFSSTQDTVVAL ALSKYGA TFT+ KA
Sbjct: 1229 RVTAQPAPSSEDLSMASRMVKWITKQQNPNGGFSSTQDTVVALQALSKYGALTFTKWEKA 1288
Query: 1081 AEVTIQSTGTFSKKFXXXXXXXXXXXXISLPAVPGEYSITATGKGCVYLQTSLKYNILPK 1260
A VT++S+ +FSK+F ++LP +PGEYS +G GCVYLQT L+YN+LPK
Sbjct: 1289 ATVTVKSSESFSKEFQVDETNRLLLQEVTLPEIPGEYSTVVSGSGCVYLQTFLRYNVLPK 1348
Query: 1261 K-EDFPFALEVQTLPPTCEP-KAHTSFQISVNVSYTGSRPASNMAIVDVKMVSGFIPLKP 1434
K PF L+V T C+ AH QI +N+SYTG RP+SNM IVDVKMVSGFIP+K
Sbjct: 1349 KGRKAPFTLKVDTDSKNCDAVDAHRKVQIHINISYTGERPSSNMVIVDVKMVSGFIPVKS 1408
Query: 1435 Q*KCLKD 1455
K L++
Sbjct: 1409 SVKKLQE 1415
>ref|XP_001925373.3| PREDICTED: alpha-2-macroglobulin-like protein 1 [Sus scrofa].
Length = 1340
Score = 327 bits (838), Expect = 1e-89
Identities = 169/336 (50%), Positives = 237/336 (70%)
Frame = +1
Query: 4 NSLLCPSDAGASEQLSLKLPPNVVEDSARAFFSVLGDLLGSAMRNTQNLLQMPYGCGEQN 183
+SLLCP + ASE +SL++P +VV DSA+A+ +VLGD++G+A++N L+QMP GCGEQN
Sbjct: 919 SSLLCPKGSVASESVSLEVPVDVVPDSAKAYITVLGDIMGTALQNLDKLVQMPSGCGEQN 978
Query: 184 MVLFAPNIYVLDYLNETQQLTAEIKSKAIRYLNTGYQRQLLYKHYDGSYSTFGEHYGRSE 363
MVLFAP IYVL YL ++ LT EI+S+A+ YL GYQR+L+YKH DGSYS FGE G
Sbjct: 979 MVLFAPIIYVLQYLEKSGLLTEEIRSRAVGYLKLGYQRELMYKHSDGSYSAFGERDG--S 1036
Query: 364 GNTWLTAFVMKTFAQARTYIFIDETHITEALTWLSQKQKDNGCFRSSGSLLNNAIKGGVD 543
GNTWLTAFV K F QA+ +IFID+ +I +AL W++ Q +GC+ + G LL+ A+KGGVD
Sbjct: 1037 GNTWLTAFVTKCFGQAQKFIFIDDKNIEDALKWMAGNQLSSGCYANVGKLLHTAMKGGVD 1096
Query: 544 DEVTLSAYVTIALLEIPLAVTHPVVRSALFCLETAWKSAQEGSQGSHVYTKALLAYAFAL 723
DEV+L+AY+T ALLE+ P+V L CL+ + S + +YT+ALLAY F+L
Sbjct: 1097 DEVSLTAYITAALLEMGKTRDDPMVSQGLQCLKNS------ASSTTSLYTQALLAYTFSL 1150
Query: 724 AGNQEKKKEVLQSLDAEAVKEGDSIHWTRPQKPEAPVQHFYKPRAPSAEVEMTAYVLLTC 903
AG + + +L+ LD +A+ G+SIHW++ + + +P A EVE+TAY LL
Sbjct: 1151 AGEMDLRNMLLEKLDQQAIISGESIHWSQKPTRSSNASPWSEPEA--VEVELTAYALLAW 1208
Query: 904 LTAQSALSSEDLNLATLIMKWITKQQNSQGGFSSTQ 1011
L +++ L+ +++ AT I+ W+TKQQN+ GGFSSTQ
Sbjct: 1209 L-SKADLTQKEIAKATGIVAWLTKQQNAYGGFSSTQ 1243
>ref|XP_003123534.2| PREDICTED: c3 and PZP-like alpha-2-macroglobulin domain-containing
protein 8 [Sus scrofa].
Length = 1907
Score = 271 bits (693), Expect = 7e-73
Identities = 172/496 (34%), Positives = 261/496 (52%), Gaps = 31/496 (6%)
Frame = +1
Query: 25 DAGASEQLSLKLPPNVVEDSARAFFSVLGDLLGSAMRNTQNLLQMPYGCGEQNMVLFAPN 204
D SE +L +P + + S RA S++GD++G + NLL++P+GCGEQNM+ FAPN
Sbjct: 1141 DESYSEAFTLGVPHSAIPGSERAAASIIGDVMGPTLNRLSNLLRLPFGCGEQNMIHFAPN 1200
Query: 205 IYVLDYLNETQQLTAEIKSKAIRYLNTGYQRQLLYKHYDGSYSTFGEHYGRSEGNTWLTA 384
++VL YL +T+QL+ E++ + YL GYQRQL YKH DGSYS FGE + G+ WLTA
Sbjct: 1201 VFVLKYLQKTRQLSPEVERETTDYLVQGYQRQLTYKHQDGSYSAFGER--DASGSMWLTA 1258
Query: 385 FVMKTFAQARTYIFIDETHITEALTWLSQKQKDNGCFRSSGSLLNNAIKGGVDDEVTLSA 564
FV+K+FAQAR+++FID + +A W+ Q+Q+ +G F + G +LN I+GG+ V L+A
Sbjct: 1259 FVLKSFAQARSFVFIDPQELADAKGWIVQQQQADGSFPAVGRILNKDIQGGIHGTVPLTA 1318
Query: 565 YVTIALLEIPLAVTHP--VVRSALFCLETAWKSAQEGSQGSHVYTKALLAYAFALAGNQE 738
YV ALLE+ A + A LE++ A + Y+ AL AY L
Sbjct: 1319 YVVAALLEVGPASEEERGAIAKARHFLESSAPLAVD------PYSSALTAYTLTLL-RSP 1371
Query: 739 KKKEVLQSLDAEAVKEGDSIHWTRPQKPEAPVQHFYK------PRAPSAEVEMTAYVLLT 900
L+ L + A+ + HW+ + F SAEVEMTAY LLT
Sbjct: 1372 AAPAALRKLRSLAITQDGMTHWSLTGSRDVDKDAFLSFSDGVYQSVVSAEVEMTAYALLT 1431
Query: 901 CLTAQSALSSEDLNLATLIMKWITKQQNSQGGFSSTQDTVVALHALSKYGAATFTRTGKA 1080
D+ A ++KW+++Q+N+ GGFSSTQDT VAL AL++Y ++ G
Sbjct: 1432 YTLL------GDVATALPVVKWLSQQRNALGGFSSTQDTCVALQALAEYAILSYA-GGVN 1484
Query: 1081 AEVTIQSTG-TFSKKFXXXXXXXXXXXXISLPAVPGEYSITATGKGCVYLQTSLKYNILP 1257
V++ ST + + F ++P++P ++A G+GC +Q + YN+
Sbjct: 1485 LTVSLASTNLDYQETFELHRANQKLLQTAAIPSLPTGLFVSAKGEGCCLMQIDVTYNVPD 1544
Query: 1258 KKEDFPFALEVQTLPPTCEPKA------------------HTSFQISVNVS----YTGSR 1371
F L V P + + H +Q+++ V + GS
Sbjct: 1545 PVAKASFQLLVNLQEPEAQQRRPSGPASSADDDDPAADQHHQEYQVTLEVCTRWLHAGS- 1603
Query: 1372 PASNMAIVDVKMVSGF 1419
SNMA+++V ++SGF
Sbjct: 1604 --SNMAVLEVPLLSGF 1617
>ref|XP_003355629.1| PREDICTED: ovostatin homolog 2-like, partial [Sus scrofa].
Length = 427
Score = 243 bits (619), Expect = 3e-64
Identities = 134/356 (37%), Positives = 201/356 (56%), Gaps = 5/356 (1%)
Frame = +1
Query: 376 LTAFVMKTFAQARTYIFIDETHITEALTWLSQKQKDNGCFRSSGSLLNNAIKGGVDDEVT 555
L+A KT + Y+FIDE E L WLS KQK NGCF+S G + NNA + G +++
Sbjct: 9 LSALTFKTLEGMKKYVFIDEQVPKETLIWLSNKQKRNGCFQSDGKIFNNAWEVGDEEDTL 68
Query: 556 LSAYVTIALLEIPLAVTHPVVRSALFCLETAWKSAQEGSQGSHVYTKALLAYAFALAGNQ 735
L+AY+ A LE L T P +R ALFCL A ++ ++ Y +A+LAYAFALAG +
Sbjct: 69 LTAYIVGAFLEAGLNFTFPALRDALFCLSEALENGV-----TNGYNQAILAYAFALAGKE 123
Query: 736 EKKKEVLQSLDAEAVKEGDSIHWTRPQKPEAPVQHFYKPRAPSAEVEMTAYVLLTCLTAQ 915
E+ +LQ LD A K+ ++I+W R +KP+ + P PSAE+E T YVLL L+ +
Sbjct: 124 EQADSLLQILDQSATKKNNAIYWERAKKPKTDASPSFTPLTPSAEMEKTCYVLLAVLSRK 183
Query: 916 SALSSEDLNLATLIMKWITKQQNSQGGFSSTQDTVVALHALSKYGAATFTRTGKAAEVTI 1095
+ DL A+ I++W+ +Q NS GGFS QDT + L A+++Y TF+
Sbjct: 184 ----TPDLTYASKIVQWLAQQMNSYGGFSYPQDTAICLLAVTRYMTLTFSDN-------- 231
Query: 1096 QSTGTFSKKFXXXXXXXXXXXXI-----SLPAVPGEYSITATGKGCVYLQTSLKYNILPK 1260
Q+ TFS + + LP G+Y++ G+GC ++Q +LKYN+L
Sbjct: 232 QNNVTFSNEASSEIVQVNSDNRLLVQRSELPRAGGQYTVDVEGQGCTFIQATLKYNVLLP 291
Query: 1261 KEDFPFALEVQTLPPTCEPKAHTSFQISVNVSYTGSRPASNMAIVDVKMVSGFIPL 1428
K++ F+L ++ + + F +++ + YTG SNM +VDVKM+SGF P+
Sbjct: 292 KKESGFSLSLEIVRKNSSDTFQSHFDLTITLQYTGIHNNSNMVLVDVKMLSGFTPV 347
>ref|NP_001116561.1| complement C4 [Sus scrofa].
Length = 1741
Score = 150 bits (380), Expect = 1e-36
Identities = 123/384 (32%), Positives = 184/384 (47%), Gaps = 38/384 (9%)
Frame = +1
Query: 64 PNVVEDSA-RAFFSVLG----DLLGS----AMRNTQNLLQMPYGCGEQNMVLFAPNIYVL 216
PNV+ D R+F + D LGS + +LL++P GC EQ M AP +
Sbjct: 964 PNVIPDGDFRSFVRLTASDPLDTLGSEGALSPGGLASLLRLPRGCAEQTMFYLAPTLAAS 1023
Query: 217 DYLNETQQ---LTAEIKSKAIRYLNTGYQRQLLYKHYDGSYSTFGEHYGRSEGNTWLTAF 387
YL++T+Q L E K A+ + GY R ++ DGSY + E +TWLTAF
Sbjct: 1024 RYLDKTEQWSTLPPETKDHAVDLIQKGYTRIQEFRKNDGSYGAWLHR----ESSTWLTAF 1079
Query: 388 VMKTFAQARTYIFIDETHITEALTWLSQKQKDNGCFRSSGSLLNNAIKGGV---DDEVTL 558
V+K + A+ + + E WL +QK++G F +++ ++GG+ D++V L
Sbjct: 1080 VLKVLSLAQEQVGGSPEKLQETAAWLLLQQKEDGSFHDPCPVIHRDMQGGLVGNDEKVAL 1139
Query: 559 SAYVTIALLEIPLAVTHPVVRSALFCLETAWKSAQE--------GSQGSHVYTKALLAYA 714
+A+V IAL LAV +E A +A + G GSH A+ AYA
Sbjct: 1140 TAFVVIALHH-GLAVFQDRNAEQFKRVENAISTANDFLGEKVSSGLLGSHA--AAISAYA 1196
Query: 715 FALAGNQEKKKEVLQS-LDAEAVKEGDSIHW--------------TRPQKPEAPVQHFYK 849
+L+ E+ +++ + L A A K GD + W PQ+P P+
Sbjct: 1197 LSLSRAPEQLQDIAHNNLMAMAQKIGDHLFWGTVPSSQSNTLSPTPAPQRPTDPM----- 1251
Query: 850 PRAPSAEVEMTAYVLLTCLTAQSALSSEDLNLATLIMKWITKQQNSQGGFSSTQDTVVAL 1029
P+AP+ +E TAY LL L + D + W+T+Q + +GGF STQDTV+AL
Sbjct: 1252 PQAPALWIETTAYALLHLLIREGKAEMADQTAS-----WLTRQGSYKGGFRSTQDTVIAL 1306
Query: 1030 HALSKYGAATFTRTGKAAEVTIQS 1101
ALS Y + T K VT+ S
Sbjct: 1307 DALSAYWILSHTTEEKELNVTLSS 1330
>ref|XP_001927580.2| PREDICTED: CD109 antigen isoform 1 [Sus scrofa].
Length = 1144
Score = 145 bits (365), Expect = 8e-35
Identities = 117/389 (30%), Positives = 185/389 (47%), Gaps = 12/389 (3%)
Frame = +1
Query: 289 YQRQLLYKHYDGSYSTFGEHYGRSEGNTWLTAFVMKTFAQARTYIFIDETHITEALTWLS 468
YQR+LLY+ DGS+S FG G+TWL+AFV++ F +A YI ID+ + TWL
Sbjct: 656 YQRELLYQREDGSFSAFGND--DPSGSTWLSAFVLRCFLEADPYIDIDQNVLHRTYTWLK 713
Query: 469 QKQKDNGCFRSSGSLLNNAIKGGVDDEVTLSAYVTIALLEIPLAVTHPVVRSALFCLETA 648
QK NG F G ++++ ++GG +TL+AY+ +LL + V+ ++ LE+
Sbjct: 714 GHQKSNGEFWEPGRVIHSELQGGNQSPITLTAYIVTSLLGYKKYQPNIDVQESINFLESE 773
Query: 649 WKSAQEGSQGSHVYTKALLAYAFALAGNQEKKKEVLQSLDAEAVKEGDSIHWTRPQKPEA 828
+ S YT AL+ YA + + K KE L L + A +EG W +
Sbjct: 774 FDKGI-----SDNYTLALVTYALS-SVRSPKAKEALNVLTSGAEQEGGMQFWV------S 821
Query: 829 PVQHFYKPRAPSA-EVEMTAYVLLTCLTAQSALSSEDLNLATLIMKWITKQQNSQGGFSS 1005
V + PS+ ++E+ AY LL + ++ IM+W+++Q+NS GGF+S
Sbjct: 822 AVSRLSESWQPSSLDIEVAAYTLL------AHFLQNQVSEGIPIMRWLSRQRNSLGGFAS 875
Query: 1006 TQDTVVALHALSKYGAATFTRTGKAAEVTIQSTGTFSKKFXXXXXXXXXXXXISLPA-VP 1182
TQDTVVAL ALS++ A T + + KF L P
Sbjct: 876 TQDTVVALKALSEFAALMNTEKTDIQVKVVGPRSSSPVKFLINTENRFLLQTAELAVEEP 935
Query: 1183 GEYSITATGKGCVYLQTSLKYNILPKK---------EDFPFALEVQTLPPTCEPKAHTSF 1335
+I+A+G G Q ++ YN+ + + F L++ +
Sbjct: 936 TAVNISASGFGFAICQLNVIYNVKDSRSSRIRKSIQDQEAFDLDIAVKDNNDDV---NHL 992
Query: 1336 QISVNVSYTGSRPA-SNMAIVDVKMVSGF 1419
+SV + G PA S MA+++V ++SGF
Sbjct: 993 NLSVCTRFLG--PARSGMALMEVNLLSGF 1019
>ref|NP_999174.1| complement C3 [Sus scrofa].
Length = 1661
Score = 128 bits (322), Expect = 7e-30
Identities = 118/443 (26%), Positives = 197/443 (44%), Gaps = 15/443 (3%)
Frame = +1
Query: 142 QNLLQMPYGCGEQNMVLFAPNIYVLDYLNETQQ---LTAEIKSKAIRYLNTGYQRQLLYK 312
++L+Q P GCGEQNM+ P + + YL+ T+Q E + +A+ + GY +QL ++
Sbjct: 999 KHLIQTPSGCGEQNMIGMTPTVIAVHYLDSTEQWEKFGLEKRQEALELIKKGYTQQLAFR 1058
Query: 313 HYDGSYSTFGEHYGRSEGNTWLTAFVMKTFAQARTYIFIDETHITEALTWL-SQKQKDNG 489
+ +++ F + +T LTA+V+K FA A I ID + A+ WL +KQK +G
Sbjct: 1059 QKNSAFAAFQDRL----SSTLLTAYVVKVFAMAANLIAIDSQVLCGAVKWLILEKQKPDG 1114
Query: 490 CFRSSGSLLNNAIKGGV----DDEVTLSAYVTIALLEIPLAVTHPVVRSALFCLETAWK- 654
F +G +++ + GG + +V+L+A+V IAL E + P V S L + A
Sbjct: 1115 VFEENGPVIHQEMIGGFKNTEEKDVSLTAFVLIALQEAK-DICEPQVNSLLRSINKARDF 1173
Query: 655 SAQEGSQGSHVYTKALLAYAFALAGNQEKKKEVLQSLDAEAVKEGDSIHWTRPQKPEAPV 834
A + YT A+ YA AL+ +K E + KE + W E P
Sbjct: 1174 LADYYLELKRPYTVAIAGYALALS---DKLDEPFLNKLLSTAKERN--RW------EEPG 1222
Query: 835 QHFYKPRAPSAEVEMTAYVLLTCLTAQSALSSEDLNLATLIMKWITKQQNSQGGFSSTQD 1014
Q + VE T+Y LL L +D + I++W+ +Q+ GG+ STQ
Sbjct: 1223 QKLH-------NVEATSYALLALLVV------KDFDSVPPIVRWLNEQRYYGGGYGSTQA 1269
Query: 1015 TVVALHALSKYGAATFTRTGKAAEVTIQSTGTFSKKFXXXXXXXXXXXXISLPAVPGEYS 1194
T + AL++Y +V+I + ++
Sbjct: 1270 TFMVFQALAQYQKDVPDHKDLNLDVSIHLPSRSAPVRHRILWESASLLRSEETKENEGFT 1329
Query: 1195 ITATGKGCVYLQTSLKYN------ILPKKEDFPFALEVQTLPPTCEPKAHTSFQISVNVS 1356
+ A GKG L Y+ KK D ++ P +A +S + +
Sbjct: 1330 LIAEGKGQGTLSVVTMYHGKAKGKTTCKKFDLKVSIHPAPEPVKKPQEAKSSMVLDICTR 1389
Query: 1357 YTGSRPASNMAIVDVKMVSGFIP 1425
Y G++ A+ M+I+D+ M++GF P
Sbjct: 1390 YLGNQDAT-MSILDISMMTGFSP 1411
>ref|NP_001001646.1| complement C5 [Sus scrofa].
Length = 1677
Score = 96.7 bits (239), Expect = 3e-20
Identities = 93/365 (25%), Positives = 158/365 (43%), Gaps = 39/365 (10%)
Frame = +1
Query: 70 VVEDSARAFFSVLGDLLGSAMRNTQN------LLQMPYGCGEQNMVLFAPNIYVLDYL-- 225
V + + SV G L+G M + L +P G E ++ P YV YL
Sbjct: 968 VPKTKVKRIVSVKGLLIGEVMSAVLSQEGIDILTHLPKGNAEAELMSIVPVFYVFHYLEA 1027
Query: 226 ----NETQQLTAEIKSKAIRYLNTGYQRQLLYKHYDGSYSTFGEHYGRSEGNTWLTAFVM 393
N + + + L G + +++ D SYS + +TWLTAF +
Sbjct: 1028 GNNWNIFSSNSLAQRQNLQKKLREGVVSVMSFRNADHSYSMWKS----GSASTWLTAFAL 1083
Query: 394 KTFAQARTYIFIDETHITEALTWLSQK-QKDNGCFRSSGSLLNNAIKGGV-----DDEVT 555
+ QA YI D I ++ WL +K Q NG F+ + ++G + ++ +
Sbjct: 1084 RVLGQASKYIDQDLNSICNSILWLVEKCQLGNGSFKENSEYQPIKLQGTLPIEAQENTLY 1143
Query: 556 LSAYVTIA---------LLEIPLAVTHPVVRSALFCLETAWKSAQEGSQGSHVYTKALLA 708
L+A+ I L++I +A+T ++ F LE + + A+ A
Sbjct: 1144 LTAFAVIGIRKAFDLCPLMKISMALT----KADTFLLENTRSTRS-------TFALAIAA 1192
Query: 709 YAFALAGNQEKK-KEVLQSLDAEAVKEGDSIHWTRPQKPEAPVQHFYK----------PR 855
YA +L + + ++ +L EA+ +G+ P+ F+K P
Sbjct: 1193 YALSLGDKSHPQFRSIVSALKKEALVKGNP-----------PIYRFWKDDLQKKDRSVPN 1241
Query: 856 APSAE-VEMTAYVLLTCLTAQSALSSEDLNLATLIMKWITKQQNSQGGFSSTQDTVVALH 1032
+A VE TAY LLT +L+ +D+N I+KW++++Q GGF STQDT+ A+
Sbjct: 1242 TGTARMVETTAYALLT------SLNLKDMNYVNPIIKWLSEEQRYGGGFYSTQDTINAIE 1295
Query: 1033 ALSKY 1047
L++Y
Sbjct: 1296 GLTEY 1300
>ref|XP_003354119.1| PREDICTED: complement C3-like [Sus scrofa].
Length = 1525
Score = 85.9 bits (211), Expect = 6e-17
Identities = 123/522 (23%), Positives = 203/522 (38%), Gaps = 75/522 (14%)
Frame = +1
Query: 85 ARAFFSVLGDLLGSAM------RNTQNLLQMPYGCGEQNMVLFAP--------------- 201
A F SV GD+L + R TQ LL++P GC EQ + P
Sbjct: 787 AEVFVSVQGDILAETILGSLTPRETQRLLRVPTGCPEQTLSSLTPAIILTRYLDATGQWN 846
Query: 202 ------------NIYVLDYLNETQQLTAEIKSKAIRYLNTG------------------- 288
NI DYL + ++ + +Y ++
Sbjct: 847 KVGVEHREMVMKNIVSDDYLTPSPRVDPNRDPQRQQYPSSPVTHGHDFHLYLGPAGPSSV 906
Query: 289 -------YQRQLLYKHYDGSYSTFGEHYGRSEGNTWLTAFVMKTFAQA---RTYIFIDET 438
Y R L ++ DG+Y T + G+TWLT++V + FA A ++ +D
Sbjct: 907 YLDPSRCYSRMLTHRSADGTYHTSKGN----PGSTWLTSYVFRVFALAYPIMSFSVLDLP 962
Query: 439 HITEALTWL-SQKQKDNGCFRSSGSLLNNAIKGGV---DDEVTLSAYVTIALLEIPLAVT 606
+ W+ +Q+Q+ +G F G ++ +++GG + +V+L+A V IAL E +
Sbjct: 963 SLCGLAKWIINQRQERDGSFSEEGPVVMASMQGGYQGSEADVSLTALVLIALNE-GKELC 1021
Query: 607 HPVVRSALFCLETAWKSA-----QEGSQGSHVYTKALLAYAFALAGNQEKKKEVLQSLDA 771
H + + LE K A ++ Q + A+++YA AL+ + +
Sbjct: 1022 HQEIPN----LEARMKKATGFLEEKLFQIQTTFAIAIVSYALALSRSPRANDRL------ 1071
Query: 772 EAVKEGDSIHWTRPQKPEAPVQHFYKPRAPSAEVEMTAYVLLTCLTAQSALSSEDLNLAT 951
+ D +W PV K S +E TAY L+ L LN
Sbjct: 1072 DRFASLDKTYW--------PVDDLNKNSLYS--IEATAYALM------QKLELGRLNETF 1115
Query: 952 LIMKWITKQQNSQGGFSSTQDTVVALHALSKYGAATFTRTGKAAEVTIQSTGTFSKKFXX 1131
I KW+ + + GGF STQ TVVA+ AL++Y A + V I++
Sbjct: 1116 AIAKWLLEMRELGGGFQSTQTTVVAIEALTRYSEAVPFDGIQNLHVQIKAPKRALNVQWS 1175
Query: 1132 XXXXXXXXXXISLPAVPGEYSITATGKGCVYLQTSLKYNILPK--KEDFPFALEVQTLPP 1305
+ + + I A+G G + Y P+ K+ TL
Sbjct: 1176 IDENNAYQLRSAKFSAQDDLEIKASGSGRGTISILTMYYRSPEFWKDTCNLYHLNVTLHT 1235
Query: 1306 TCE--PKAHTSFQISVNVSYTGSRPASNMAIVDVKMVSGFIP 1425
E K +FQ+ + + G R A+ M I++V +++GF P
Sbjct: 1236 AQEENKKGEETFQLRMKTRFQGYREAT-MTIMEVSLLTGFYP 1276
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.317 0.131 0.384
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 39,709,779
Number of extensions: 1101037
Number of successful extensions: 4173
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 4146
Number of HSP's successfully gapped: 10
Length of query: 511
Length of database: 11,343,932
Length adjustment: 103
Effective length of query: 408
Effective length of database: 8,779,541
Effective search space: 3582052728
Effective search space used: 3582052728
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007228
(1535 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr05 442 e-121
>Sscrofa_Chr05
|| Length = 111506441
Score = 442 bits (223), Expect = e-121
Identities = 226/227 (99%)
Strand = Plus / Plus
Query: 786 aggtgattccatccactggacacgacctcagaaacccgaggcaccagtgcagcattttta 845
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 65312805 aggtgattccatccactggacacgacctcggaaacccgaggcaccagtgcagcattttta 65312864
Query: 846 caaaccccgggcgccctcagctgaggtggagatgacggcctacgtgctcctcacctgcct 905
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65312865 caaaccccgggcgccctcagctgaggtggagatgacggcctacgtgctcctcacctgcct 65312924
Query: 906 cacagcccagtccgccctgagctcggaggacctgaacctcgctacgctcatcatgaagtg 965
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65312925 cacagcccagtccgccctgagctcggaggacctgaacctcgctacgctcatcatgaagtg 65312984
Query: 966 gatcacaaagcagcagaattcccaagggggcttctcctccacgcagg 1012
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65312985 gatcacaaagcagcagaattcccaagggggcttctcctccacgcagg 65313031
Score = 440 bits (222), Expect = e-120
Identities = 222/222 (100%)
Strand = Plus / Plus
Query: 1009 caggacacagtggtggctctccatgctttgtccaaatacggagcagccactttcaccagg 1068
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65314662 caggacacagtggtggctctccatgctttgtccaaatacggagcagccactttcaccagg 65314721
Query: 1069 accgggaaggctgcagaggtgaccatccaatccacagggacattctccaaaaaattccaa 1128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65314722 accgggaaggctgcagaggtgaccatccaatccacagggacattctccaaaaaattccaa 65314781
Query: 1129 gtgaacaacgacaacctcctgttactacagcagatatcattgccagcagtgcctggagaa 1188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65314782 gtgaacaacgacaacctcctgttactacagcagatatcattgccagcagtgcctggagaa 65314841
Query: 1189 tacagcataacagcaacaggaaaaggatgtgtttacctccag 1230
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65314842 tacagcataacagcaacaggaaaaggatgtgtttacctccag 65314883
Score = 359 bits (181), Expect = 3e-96
Identities = 184/185 (99%)
Strand = Plus / Plus
Query: 607 caccctgtcgtccgcagtgccctgttctgcctggagacagcctggaagtcagcccaggag 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65309711 caccctgtcgtccgcagtgccctgttctgcctggagacagcctggaagtcagcccaggag 65309770
Query: 667 ggatcccaaggtagccatgtctacaccaaggcactgctggcctacgcctttgccctggcg 726
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65309771 ggatcccaaggcagccatgtctacaccaaggcactgctggcctacgcctttgccctggcg 65309830
Query: 727 ggtaaccaggaaaagaagaaagaagtgctccagtcactagatgcggaagccgtgaaggaa 786
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65309831 ggtaaccaggaaaagaagaaagaagtgctccagtcactagatgcggaagccgtgaaggaa 65309890
Query: 787 ggtga 791
|||||
Sbjct: 65309891 ggtga 65309895
Score = 357 bits (180), Expect = 1e-95
Identities = 180/180 (100%)
Strand = Plus / Plus
Query: 109 ggagacttattaggctctgccatgagaaacacacaaaacctcctccaaatgccctacggc 168
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65305650 ggagacttattaggctctgccatgagaaacacacaaaacctcctccaaatgccctacggc 65305709
Query: 169 tgtggagaacagaatatggtcctctttgctcctaacatctatgttctggattacctgaat 228
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65305710 tgtggagaacagaatatggtcctctttgctcctaacatctatgttctggattacctgaat 65305769
Query: 229 gaaacacagcagctgactgcagagatcaagtccaaggccattcgctacctcaacaccggt 288
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65305770 gaaacacagcagctgactgcagagatcaagtccaaggccattcgctacctcaacaccggt 65305829
Score = 307 bits (155), Expect = 1e-80
Identities = 158/159 (99%)
Strand = Plus / Plus
Query: 374 ggctcacagcctttgtaatgaagacttttgcccaggctcgaacctacatcttcattgatg 433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65307891 ggctcacagcctttgtaatgaagacttttgcccaggctcgaacctacatcttcattgatg 65307950
Query: 434 aaacgcatattaccgaagccctcacctggctctcccaaaagcagaaggacaatggctgtt 493
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65307951 aaacgcatattaccgaagccctcacctggctctcccaaaagcagaaggacaatggctgtt 65308010
Query: 494 tcaggagttctgggtcactgctcaacaatgccattaagg 532
||||||| |||||||||||||||||||||||||||||||
Sbjct: 65308011 tcaggagctctgggtcactgctcaacaatgccattaagg 65308049
Score = 246 bits (124), Expect = 3e-62
Identities = 127/128 (99%)
Strand = Plus / Plus
Query: 1228 cagacatctctgaagtacaatattctcccgaaaaaggaagacttcccatttgctttggag 1287
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65315068 cagacatctctgaagtacaatattctcccgaaaaaggaagacttcccatttgctttggag 65315127
Query: 1288 gtgcagactctgccgccaacatgtgaacccaaagcccacaccagcttccagatctcagtg 1347
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65315128 gtgcagactctgccgccaacatgtgaacccaaagcccacaccagcttccagatctcagtg 65315187
Query: 1348 aacgtcag 1355
|| |||||
Sbjct: 65315188 aatgtcag 65315195
Score = 178 bits (90), Expect = 6e-42
Identities = 90/90 (100%)
Strand = Plus / Plus
Query: 286 ggttaccagagacagcttctctacaagcactacgatggctcctatagcacctttggggag 345
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65306148 ggttaccagagacagcttctctacaagcactacgatggctcctatagcacctttggggag 65306207
Query: 346 cactatggcagaagtgagggcaatacctgg 375
||||||||||||||||||||||||||||||
Sbjct: 65306208 cactatggcagaagtgagggcaatacctgg 65306237
Score = 157 bits (79), Expect = 2e-35
Identities = 85/87 (97%)
Strand = Plus / Plus
Query: 24 agatgctggggcgtctgaacaattatctctgaagctacccccaaatgtggtagaagactc 83
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 65305286 agatgctggggcgtctgaacaattatctctgaagctgcccccaaatgtggtagaagactc 65305345
Query: 84 tgctcgtgccttcttctcagttttggg 110
|||||||||||||||||||||| ||||
Sbjct: 65305346 tgctcgtgccttcttctcagttctggg 65305372
Score = 145 bits (73), Expect = 8e-32
Identities = 76/77 (98%)
Strand = Plus / Plus
Query: 530 agggtggagtggacgatgaagtaaccctctctgcctatgtcaccattgcacttttggaga 589
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 65308609 agggtggagtggacgatgaagtaaccctctctgcctatgtcaccattgcacttctggaga 65308668
Query: 590 ttcctctcgctgtcact 606
|||||||||||||||||
Sbjct: 65308669 ttcctctcgctgtcact 65308685
Score = 133 bits (67), Expect = 3e-28
Identities = 90/95 (94%), Gaps = 2/95 (2%)
Strand = Plus / Plus
Query: 1352 tcagttacaccggcagccgtccagcctccaacatggcgattgttgatgtaaagatggtat 1411
|||||||||| || ||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 65316374 tcagttacactggaagccgtccagcctcccacatggcgattgttgatgtaaagatggtat 65316433
Query: 1412 ctggcttcattcctttgaaacc-acagtgaaaatg 1445
||||||||||| |||||||||| ||||||||||||
Sbjct: 65316434 ctggcttcatt-ctttgaaaccaacagtgaaaatg 65316467
Score = 105 bits (53), Expect = 7e-20
Identities = 67/69 (97%), Gaps = 2/69 (2%)
Strand = Plus / Plus
Query: 1445 gcttgaaagatctgacaacgtgagccgaaacagag-tcagcagcaaccatgttttgattt 1503
||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 65317827 gcttgaaagatctgacaacgtgagccgaa-cagaggtcagcagcaaccatgttttgattt 65317885
Query: 1504 acctggata 1512
|||||||||
Sbjct: 65317886 acctggata 65317894
Score = 79.8 bits (40), Expect = 4e-12
Identities = 106/128 (82%)
Strand = Plus / Plus
Query: 152 tccaaatgccctacggctgtggagaacagaatatggtcctctttgctcctaacatctatg 211
|||| |||||||| || |||||||| ||||||||||||| |||| ||||| |||||||
Sbjct: 65223320 tccagatgccctatggttgtggagagcagaatatggtccgttttgtccctaatatctatg 65223379
Query: 212 ttctggattacctgaatgaaacacagcagctgactgcagagatcaagtccaaggccattc 271
||||| | || ||||| || ||||| |||||||| | ||||||||||||| |||||
Sbjct: 65223380 ttctgaactatctgaaagagacacaacagctgacagagaagatcaagtccaaagccatca 65223439
Query: 272 gctacctc 279
||||||||
Sbjct: 65223440 gctacctc 65223447
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 45,849,073
Number of extensions: 380
Number of successful extensions: 380
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 379
Number of HSP's successfully gapped: 12
Length of query: 1535
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1514
Effective length of database: 2,808,413,156
Effective search space: 4251937518184
Effective search space used: 4251937518184
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)