Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007229
(1248 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001103265.1| alpha-2-macroglobulin [Bos taurus]. 555 e-158
Alignment gi|XP_002687891.1| PREDICTED: pregnancy-zone protein-like [Bos ... 493 e-139
Alignment gi|XP_583329.4| PREDICTED: Alpha-2-macroglobulin-like, partial ... 493 e-139
Alignment gi|XP_002687862.1| PREDICTED: alpha-2-macroglobulin-like 1 [Bos... 343 2e-94
Alignment gi|NP_001178230.1| alpha-2-macroglobulin-like protein 1 [Bos ta... 341 9e-94
Alignment gi|NP_001157496.1| ovostatin 2 [Bos taurus]. 285 6e-77
Alignment gi|XP_002690068.1| PREDICTED: thiolester containing protein II-... 218 7e-57
Alignment gi|XP_613667.3| PREDICTED: thiolester containing protein II-lik... 218 7e-57
Alignment gi|XP_002688595.1| PREDICTED: C3 and PZP-like, alpha-2-macroglo... 187 2e-47
Alignment gi|XP_609516.3| PREDICTED: C3 and PZP-like, alpha-2-macroglobul... 187 2e-47
>ref|NP_001103265.1| alpha-2-macroglobulin [Bos taurus].
Length = 1510
Score = 555 bits (1429), Expect = e-158
Identities = 305/460 (66%), Positives = 329/460 (71%), Gaps = 45/460 (9%)
Frame = +3
Query: 3 FVELTMPYSVIRGEGFTLKATVFNYLPKCIRVSVHLMDSPAFLAVPEEKEEKAHCICGNG 182
FVELTMPYSVIRGE FTLKATV NYLPKCIRVSV L SPAFLAVPE KE++ +CICGNG
Sbjct: 795 FVELTMPYSVIRGEAFTLKATVLNYLPKCIRVSVQLEASPAFLAVPE-KEQETYCICGNG 853
Query: 183 RQTVSWAVTPKSLEKVNFTVTAEALSSQELCGTEAAMVPEYGRKDTIIKSLLVEPEGLEK 362
RQTVSWAVTPKSL VNFTV+AEA+ SQELCG+E +VPE+GRKDTIIK LLVEPEGLEK
Sbjct: 854 RQTVSWAVTPKSLGNVNFTVSAEAVESQELCGSEVPVVPEHGRKDTIIKPLLVEPEGLEK 913
Query: 363 EVTFNSLLCPS------------------------------------DAGASEQLSLKLP 434
EV FNSLLCPS A SE LSLKLP
Sbjct: 914 EVIFNSLLCPSVDFVFLGAEDGGQVLRHFPPAAATDTAADAHDPARPGAKVSESLSLKLP 973
Query: 435 PNVVEDSARAFFSVLGDLLGSAMRNTQNLLQMPYGCGEQNMVLFAPNIYVLDYLNETQQL 614
PNVVE+SARA FSVLGD+LGSAMRNTQNLLQMPYGCGEQNM FAPNIYVLDYLNETQQL
Sbjct: 974 PNVVEESARASFSVLGDILGSAMRNTQNLLQMPYGCGEQNMARFAPNIYVLDYLNETQQL 1033
Query: 615 TAEIKSKAIRYLNTGYQRQLLYKHYDGSYSTFGEHYGRSEGNTWLTAFVMKTFAQARTYI 794
TAE+KSKAI YLNTGYQRQLLYKH+DGSYSTFGEH G SEGNTWLTAFV+K+FAQAR YI
Sbjct: 1034 TAELKSKAILYLNTGYQRQLLYKHFDGSYSTFGEHRGNSEGNTWLTAFVLKSFAQARGYI 1093
Query: 795 FIDETHITEALTWLSQKQKDNGCFRSSGSLLNNAIKGGVDDEVTLSAYVXXXXXXXXXXX 974
FIDE HITEALTWL+QKQK NGCFRS+G+LLNNAIKGGVDDEVTLSAY+
Sbjct: 1094 FIDEAHITEALTWLAQKQKSNGCFRSTGTLLNNAIKGGVDDEVTLSAYITIALLEMPLPV 1153
Query: 975 XXXXXXVPC----SAWR--QPGSQPRRDPKVACLHQSTAGLRLWPGGLPGKEE---GVLQ 1127
SAW+ + GSQ H T L + L G +E VL
Sbjct: 1154 THPVVRNALFCLDSAWKSAKEGSQGS--------HVYTKALLAYAFALAGNQERRTEVLT 1205
Query: 1128 SLXAEAVKEGDFIHWTPTQKPEAPVQHFYXPRXASAEVEM 1247
SL EAVKE + IHWT QKP + Y PR SAEVEM
Sbjct: 1206 SLYEEAVKEDNTIHWTRPQKPRLLTEDIYQPRAPSAEVEM 1245
>ref|XP_002687891.1| PREDICTED: pregnancy-zone protein-like [Bos taurus].
Length = 1424
Score = 493 bits (1269), Expect = e-139
Identities = 254/416 (61%), Positives = 306/416 (73%), Gaps = 1/416 (0%)
Frame = +3
Query: 3 FVELTMPYSVIRGEGFTLKATVFNYLPKCIRVSVHLMDSPAFLAVPEEKEEKAHCICGNG 182
F+ELT+PYSV+RGE FTLKATVFNYL CIRVS+ L S AFLA+P EK E++ C+CGN
Sbjct: 741 FLELTLPYSVVRGEAFTLKATVFNYLSHCIRVSIQLEASSAFLAIPVEKNEESQCVCGNK 800
Query: 183 RQTVSWAVTPKSLEKVNFTVTAEALSSQELCGTEAAMVPEYGRKDTIIKSLLVEPEGLEK 362
++TVSWAVTPKSL +VNFT TAEAL SQELCG + PE G+KDT+IK LLVEPEG+E+
Sbjct: 801 QRTVSWAVTPKSLGEVNFTATAEALRSQELCGNKVPHFPEIGQKDTVIKPLLVEPEGIER 860
Query: 363 EVTFNSLLCPSDAGASEQLSLKLPPNVVEDSARAFFSVLGDLLGSAMRNTQNLLQMPYGC 542
E TFN+LLC S+ G SE+LSLKLP NVVE SARA +SVLGD+LGSAM+N QNLL+MPYGC
Sbjct: 861 EETFNTLLCASETGGSEKLSLKLPSNVVEGSARATYSVLGDILGSAMQNLQNLLRMPYGC 920
Query: 543 GEQNMVLFAPNIYVLDYLNETQQLTAEIKSKAIRYLNTGYQRQLLYKHYDGSYSTFGEHY 722
GEQNMVLF PNIYVL+YLNET QLT +IKSKAI YL +GYQRQL YKH DGSYSTFG+
Sbjct: 921 GEQNMVLFTPNIYVLNYLNETGQLTEKIKSKAISYLISGYQRQLNYKHSDGSYSTFGDRD 980
Query: 723 GRSEGNTWLTAFVMKTFAQARTYIFIDETHITEALTWLSQKQKDNGCFRSSGSLLNNAIK 902
GRS+GNTWLTAFV+K+F+QA+++IF++++HIT++LTWLS+KQK+NGCF+ SGSLLNNAIK
Sbjct: 981 GRSQGNTWLTAFVLKSFSQAQSHIFVEDSHITDSLTWLSRKQKENGCFQRSGSLLNNAIK 1040
Query: 903 GGVDDEVTLSAYVXXXXXXXXXXXXXXXXXVPCSAWRQPGSQPRRDPKVACLHQSTAGLR 1082
GGVDDEVTLSAY+ + ++
Sbjct: 1041 GGVDDEVTLSAYITIALLEMPLLVTHSIVRNALFCLERAWQSASEAQGSFVYTKALLAYA 1100
Query: 1083 LWPGGLPGKEEGVLQSLXAEAVKEGDFIHWTPTQKPEAPVQHFYXP-RXASAEVEM 1247
G K +L+SL EAVKE D IHW +KP+ V Y P R S +VEM
Sbjct: 1101 FALAGDQAKRNELLESLHKEAVKEEDSIHWQRPRKPQ-EVNELYSPHRAPSVDVEM 1155
>ref|XP_583329.4| PREDICTED: Alpha-2-macroglobulin-like, partial [Bos taurus].
Length = 999
Score = 493 bits (1269), Expect = e-139
Identities = 254/416 (61%), Positives = 306/416 (73%), Gaps = 1/416 (0%)
Frame = +3
Query: 3 FVELTMPYSVIRGEGFTLKATVFNYLPKCIRVSVHLMDSPAFLAVPEEKEEKAHCICGNG 182
F+ELT+PYSV+RGE FTLKATVFNYL CIRVS+ L S AFLA+P EK E++ C+CGN
Sbjct: 316 FLELTLPYSVVRGEAFTLKATVFNYLSHCIRVSIQLEASSAFLAIPVEKNEESQCVCGNK 375
Query: 183 RQTVSWAVTPKSLEKVNFTVTAEALSSQELCGTEAAMVPEYGRKDTIIKSLLVEPEGLEK 362
++TVSWAVTPKSL +VNFT TAEAL SQELCG + PE G+KDT+IK LLVEPEG+E+
Sbjct: 376 QRTVSWAVTPKSLGEVNFTATAEALRSQELCGNKVPHFPEIGQKDTVIKPLLVEPEGIER 435
Query: 363 EVTFNSLLCPSDAGASEQLSLKLPPNVVEDSARAFFSVLGDLLGSAMRNTQNLLQMPYGC 542
E TFN+LLC S+ G SE+LSLKLP NVVE SARA +SVLGD+LGSAM+N QNLL+MPYGC
Sbjct: 436 EETFNTLLCASETGGSEKLSLKLPSNVVEGSARATYSVLGDILGSAMQNLQNLLRMPYGC 495
Query: 543 GEQNMVLFAPNIYVLDYLNETQQLTAEIKSKAIRYLNTGYQRQLLYKHYDGSYSTFGEHY 722
GEQNMVLF PNIYVL+YLNET QLT +IKSKAI YL +GYQRQL YKH DGSYSTFG+
Sbjct: 496 GEQNMVLFTPNIYVLNYLNETGQLTEKIKSKAISYLISGYQRQLNYKHSDGSYSTFGDRD 555
Query: 723 GRSEGNTWLTAFVMKTFAQARTYIFIDETHITEALTWLSQKQKDNGCFRSSGSLLNNAIK 902
GRS+GNTWLTAFV+K+F+QA+++IF++++HIT++LTWLS+KQK+NGCF+ SGSLLNNAIK
Sbjct: 556 GRSQGNTWLTAFVLKSFSQAQSHIFVEDSHITDSLTWLSRKQKENGCFQRSGSLLNNAIK 615
Query: 903 GGVDDEVTLSAYVXXXXXXXXXXXXXXXXXVPCSAWRQPGSQPRRDPKVACLHQSTAGLR 1082
GGVDDEVTLSAY+ + ++
Sbjct: 616 GGVDDEVTLSAYITIALLEMPLLVTHSIVRNALFCLERAWQSASEAQGSFVYTKALLAYA 675
Query: 1083 LWPGGLPGKEEGVLQSLXAEAVKEGDFIHWTPTQKPEAPVQHFYXP-RXASAEVEM 1247
G K +L+SL EAVKE D IHW +KP+ V Y P R S +VEM
Sbjct: 676 FALAGDQAKRNELLESLHKEAVKEEDSIHWQRPRKPQ-EVNELYSPHRAPSVDVEM 730
>ref|XP_002687862.1| PREDICTED: alpha-2-macroglobulin-like 1 [Bos taurus].
Length = 1456
Score = 343 bits (879), Expect = 2e-94
Identities = 182/416 (43%), Positives = 252/416 (60%), Gaps = 3/416 (0%)
Frame = +3
Query: 3 FVELTMPYSVIRGEGFTLKATVFNYLPKCIRVSVHLMDSPAFLAVPEEKEEKAHCICGNG 182
FV+LT+PYSV+RGE F L AT+FNYL KCIRV +L S + + + C+C +
Sbjct: 793 FVDLTLPYSVVRGESFRLTATIFNYLKKCIRVQTNLAKSEEYRVETQTATRASTCLCADE 852
Query: 183 RQTVSWAVTPKSLEKVNFTVTAEALSSQELCGTEAAMVPEYGRKDTIIKSLLVEPEGLEK 362
++ W +T L VNFT++ + L+S ELCG + A VP G DT+IK +LV+PEG+
Sbjct: 853 AKSYHWNITAVKLGHVNFTISTKILNSNELCGGQKAFVPLKGGSDTLIKPVLVKPEGVLV 912
Query: 363 EVTFNSLLCPSDAGASEQLSLKLPPNVVEDSARAFFSVLGDLLGSAMRNTQNLLQMPYGC 542
E T +SLLCP ASE +SL++P +VV DSARA+ +VLGD++G+A++N NL+QMP GC
Sbjct: 913 EKTHSSLLCPKGKVASESISLEVPVDVVPDSARAYVAVLGDIMGTALQNLDNLVQMPRGC 972
Query: 543 GEQNMVLFAPNIYVLDYLNETQQLTAEIKSKAIRYLNTGYQRQLLYKHYDGSYSTFGEHY 722
GEQNMVLFAP IYVL YL +T+ LT EI S+A+ +L GYQR+L+YKH +GSYS FGE
Sbjct: 973 GEQNMVLFAPIIYVLQYLEKTELLTEEIWSRAVGFLKLGYQRELMYKHSNGSYSAFGEQD 1032
Query: 723 GRSEGNTWLTAFVMKTFAQARTYIFIDETHITEALTWLSQKQKDNGCFRSSGSLLNNAIK 902
G GNTWLTAFV K F QAR +IFID+ +I +AL W++ Q +GC+ + G LL ++K
Sbjct: 1033 G--NGNTWLTAFVTKCFGQARQFIFIDDKNIQDALEWMAGNQLSSGCYDNVGKLLQTSMK 1090
Query: 903 GGVDDEVTLSAYVXXXXXXXXXXXXXXXXXVPCSAWRQPGSQPRRDPKVACLHQSTAGLR 1082
GGVDDEV+L+AY+ G Q + + + T L
Sbjct: 1091 GGVDDEVSLTAYITAALLEMGKTIDDPMV--------SQGLQCVKSSVSSTTNLYTQALL 1142
Query: 1083 LWPGGLPGK---EEGVLQSLXAEAVKEGDFIHWTPTQKPEAPVQHFYXPRXASAEV 1241
+ L G +L+ L +A+ G+ HW+ P + + P E+
Sbjct: 1143 AYTFSLAGNMNIRNILLEKLDQQAIVSGESTHWSQKPAPTSDTSPWSQPEAVDVEL 1198
>ref|NP_001178230.1| alpha-2-macroglobulin-like protein 1 [Bos taurus].
Length = 1396
Score = 341 bits (874), Expect = 9e-94
Identities = 167/313 (53%), Positives = 224/313 (71%)
Frame = +3
Query: 3 FVELTMPYSVIRGEGFTLKATVFNYLPKCIRVSVHLMDSPAFLAVPEEKEEKAHCICGNG 182
FV+LT+PYSV+RGE F L AT+FNYL KCIRV +L S + + + C+C +
Sbjct: 793 FVDLTLPYSVVRGESFRLTATIFNYLKKCIRVQTNLAKSEEYRVETQTATRASTCLCADE 852
Query: 183 RQTVSWAVTPKSLEKVNFTVTAEALSSQELCGTEAAMVPEYGRKDTIIKSLLVEPEGLEK 362
++ W +T L VNFT++ + L+S ELCG + A VP G DT+IK +LV+PEG+
Sbjct: 853 AKSYHWNITAVKLGHVNFTISTKILNSNELCGGQKAFVPLKGGSDTLIKPVLVKPEGVLV 912
Query: 363 EVTFNSLLCPSDAGASEQLSLKLPPNVVEDSARAFFSVLGDLLGSAMRNTQNLLQMPYGC 542
E T +SLLCP ASE +SL++P +VV DSARA+ +VLGD++G+A++N NL+QMP GC
Sbjct: 913 EKTHSSLLCPKGKVASESISLEVPVDVVPDSARAYVAVLGDIMGTALQNLDNLVQMPRGC 972
Query: 543 GEQNMVLFAPNIYVLDYLNETQQLTAEIKSKAIRYLNTGYQRQLLYKHYDGSYSTFGEHY 722
GEQNMVLFAP IYVL YL +T+ LT EI S+A+ +L GYQR+L+YKH +GSYS FGE
Sbjct: 973 GEQNMVLFAPIIYVLQYLEKTELLTEEIWSRAVGFLKLGYQRELMYKHSNGSYSAFGEQD 1032
Query: 723 GRSEGNTWLTAFVMKTFAQARTYIFIDETHITEALTWLSQKQKDNGCFRSSGSLLNNAIK 902
G GNTWLTAFV K F QAR +IFID+ +I +AL W++ Q +GC+ + G LL ++K
Sbjct: 1033 G--NGNTWLTAFVTKCFGQARQFIFIDDKNIQDALEWMAGNQLSSGCYDNVGKLLQTSMK 1090
Query: 903 GGVDDEVTLSAYV 941
GGVDDEV+L+AY+
Sbjct: 1091 GGVDDEVSLTAYI 1103
>ref|NP_001157496.1| ovostatin 2 [Bos taurus].
Length = 1451
Score = 285 bits (729), Expect = 6e-77
Identities = 174/430 (40%), Positives = 244/430 (56%), Gaps = 16/430 (3%)
Frame = +3
Query: 3 FVELTMPYSVIRGEGFTLKATVFNYLPKCIRVSVHLMDSPAFLA-VPEEKEEKAHCICGN 179
FVE+T P SV+R E L +VF+YL C+ + L S F A + K+ + I +
Sbjct: 787 FVEITSPSSVVRNERSDLIVSVFSYLNTCVEIFTQLEASQDFEADISTPKDNSSEIIQAS 846
Query: 180 GRQTVSWAVTPKSLEKVNFTVTAEALSSQELCGTEAAMVPEYGRKDTIIKSLLVEPEGLE 359
++T W VTPK L KVN TV AE+ + C EA KDT+IKSLLV+PEG+E
Sbjct: 847 EKKTYVWTVTPKKLGKVNITVVAESRQNSA-CPNEAPERQNMNWKDTVIKSLLVQPEGIE 905
Query: 360 KEVTFNSLLCPSDAGASEQLSLKLPPNVVEDSARAFFSVLGDLLGSAMRNTQNLLQMPYG 539
KE+T + L+C S Q+ L L +VVE S RAFF+V+GD+LG A++N +NL QMPYG
Sbjct: 906 KEMTQSFLICTQGTKVSRQVDLNLTNDVVEGSTRAFFTVVGDILGLAIQNLENLFQMPYG 965
Query: 540 CGEQNMVLFAPNIYVLDYLNETQQLTAEIKSKAIRYLNTGYQRQLLYKHYDGSYSTFGEH 719
GEQN+ L A N Y+LDYL T+QLT E+KSKA+ +L+ GYQ+QL +K+ DGSYS F +
Sbjct: 966 GGEQNIALLASNTYILDYLKSTKQLTEEVKSKALFFLSNGYQKQLSFKNLDGSYSLFWQR 1025
Query: 720 YGRSEGNTWLTAFVMKTFAQARTYIFIDETHITEALTWLSQKQKDNGCFRSSGSLLNNAI 899
EG+ L+A KTFA + Y+FIDE E L WL+ KQK +GCF+S G L +NA
Sbjct: 1026 --NQEGSIRLSALTFKTFAGMKKYVFIDELVQRETLIWLASKQKIDGCFKSDGKLFSNAW 1083
Query: 900 KGGVDDEVTLSAYVXXXXXXXXXXXXXXXXXVPCSAWRQPG---SQPRRDPKVACLHQST 1070
+ G +++V L+AY+ +A+ + G + P + CL ++
Sbjct: 1084 EVGDEEDVVLTAYI-------------------VAAFLEAGLNFTFPALRNGLFCLEEAL 1124
Query: 1071 A-GLR--------LWPGGLPGKEEGV---LQSLXAEAVKEGDFIHWTPTQKPEAPVQHFY 1214
G+R + L GKEE V L++L A K + I+W +K + +
Sbjct: 1125 ENGVRNGYNLAVLAYAFALAGKEEKVESLLRTLDQSATKLNNVIYWGKAKKLKTEASPLF 1184
Query: 1215 XPRXASAEVE 1244
P SAE+E
Sbjct: 1185 IPWAPSAEIE 1194
>ref|XP_002690068.1| PREDICTED: thiolester containing protein II-like [Bos taurus].
Length = 1459
Score = 218 bits (556), Expect = 7e-57
Identities = 125/322 (38%), Positives = 182/322 (56%), Gaps = 9/322 (2%)
Frame = +3
Query: 3 FVELTMPYSVIRGEGFTLKATVFNYLPKCIRVSVHLMDSPAF--LAVPEEKEEKAH---- 164
F+ L +PYSVIRGE F L+ T+FNYL V V + S AF L E H
Sbjct: 763 FIFLNLPYSVIRGEEFALEVTIFNYLKDATEVKVIIEKSDAFDILMASNEINATGHQQTI 822
Query: 165 CICGNGRQTVSWAVTPKSLEKVNFTVTAEALSSQELCGTEAAMVPEYGRKDTIIKSLLVE 344
+ TV + + P L +V TVTA + ++ D + + +LV+
Sbjct: 823 LVPSEDGATVLFPIRPTRLGEVPITVTAVSPAAS----------------DAVTQRILVK 866
Query: 345 PEGLEKEVTFNSLLCPSDAGAS---EQLSLKLPPNVVEDSARAFFSVLGDLLGSAMRNTQ 515
EG+EK + + LL +D+ + LS PP+ V S R + +GD+LGS++
Sbjct: 867 AEGIEKSYSQSILLDLTDSTLQTTLKTLSFSFPPHTVSGSERVQVTAIGDILGSSINGLA 926
Query: 516 NLLQMPYGCGEQNMVLFAPNIYVLDYLNETQQLTAEIKSKAIRYLNTGYQRQLLYKHYDG 695
+L++MPYGCGEQNM+ FAPNIY+LDYL + +QLT +K KA+ ++ GYQR+LLY+ DG
Sbjct: 927 SLIRMPYGCGEQNMINFAPNIYILDYLTKKKQLTENLKEKALSFMRQGYQRELLYQREDG 986
Query: 696 SYSTFGEHYGRSEGNTWLTAFVMKTFAQARTYIFIDETHITEALTWLSQKQKDNGCFRSS 875
S+S FG G+TWL+AFV++ F +A YI ID+ + TWL QK NG F
Sbjct: 987 SFSAFGN--DDPSGSTWLSAFVLRCFLEADPYIDIDQNVLHRTYTWLKGHQKSNGEFWEP 1044
Query: 876 GSLLNNAIKGGVDDEVTLSAYV 941
G ++++ ++GG VTL+AY+
Sbjct: 1045 GRVIHSELQGGNKSPVTLTAYI 1066
>ref|XP_613667.3| PREDICTED: thiolester containing protein II-like, partial [Bos
taurus].
Length = 1276
Score = 218 bits (556), Expect = 7e-57
Identities = 125/322 (38%), Positives = 182/322 (56%), Gaps = 9/322 (2%)
Frame = +3
Query: 3 FVELTMPYSVIRGEGFTLKATVFNYLPKCIRVSVHLMDSPAF--LAVPEEKEEKAH---- 164
F+ L +PYSVIRGE F L+ T+FNYL V V + S AF L E H
Sbjct: 580 FIFLNLPYSVIRGEEFALEVTIFNYLKDATEVKVIIEKSDAFDILMASNEINATGHQQTI 639
Query: 165 CICGNGRQTVSWAVTPKSLEKVNFTVTAEALSSQELCGTEAAMVPEYGRKDTIIKSLLVE 344
+ TV + + P L +V TVTA + ++ D + + +LV+
Sbjct: 640 LVPSEDGATVLFPIRPTRLGEVPITVTAVSPAAS----------------DAVTQRILVK 683
Query: 345 PEGLEKEVTFNSLLCPSDAGAS---EQLSLKLPPNVVEDSARAFFSVLGDLLGSAMRNTQ 515
EG+EK + + LL +D+ + LS PP+ V S R + +GD+LGS++
Sbjct: 684 AEGIEKSYSQSILLDLTDSTLQTTLKTLSFSFPPHTVSGSERVQVTAIGDILGSSINGLA 743
Query: 516 NLLQMPYGCGEQNMVLFAPNIYVLDYLNETQQLTAEIKSKAIRYLNTGYQRQLLYKHYDG 695
+L++MPYGCGEQNM+ FAPNIY+LDYL + +QLT +K KA+ ++ GYQR+LLY+ DG
Sbjct: 744 SLIRMPYGCGEQNMINFAPNIYILDYLTKKKQLTENLKEKALSFMRQGYQRELLYQREDG 803
Query: 696 SYSTFGEHYGRSEGNTWLTAFVMKTFAQARTYIFIDETHITEALTWLSQKQKDNGCFRSS 875
S+S FG G+TWL+AFV++ F +A YI ID+ + TWL QK NG F
Sbjct: 804 SFSAFGN--DDPSGSTWLSAFVLRCFLEADPYIDIDQNVLHRTYTWLKGHQKSNGEFWEP 861
Query: 876 GSLLNNAIKGGVDDEVTLSAYV 941
G ++++ ++GG VTL+AY+
Sbjct: 862 GRVIHSELQGGNKSPVTLTAYI 883
>ref|XP_002688595.1| PREDICTED: C3 and PZP-like, alpha-2-macroglobulin domain containing 8
[Bos taurus].
Length = 1839
Score = 187 bits (474), Expect = 2e-47
Identities = 108/288 (37%), Positives = 163/288 (56%), Gaps = 20/288 (6%)
Frame = +3
Query: 138 PEEKEEKAHCICGNGRQTVSWAVTPKSLEKVNFTVTAEALSSQEL----CGTEAAMV--- 296
P++ + G + T SW T K E V T TA+ LS E + ++
Sbjct: 1036 PQDTAGMIEIVLGGHQNTRSWISTSKMGEPVASTPTAKILSWDEFRTFWISWHSGLIQVG 1095
Query: 297 --PEYGRKDTIIKSLLVEPEGLEKEVTFNS-----------LLCPSDAGASEQLSLKLPP 437
PE + I+ L +P ++ + F++ +D SE +L +P
Sbjct: 1096 HGPEPSNESVIMAWTLPKPPEVQF-IGFSTGWGSVGEFRIWRKVEADESYSEAFTLGVPH 1154
Query: 438 NVVEDSARAFFSVLGDLLGSAMRNTQNLLQMPYGCGEQNMVLFAPNIYVLDYLNETQQLT 617
+ + S RA S++GD++G + + NLL++P+GCGEQNM+ FAPN++VL YL +T+QL+
Sbjct: 1155 SAIPGSERAAASIIGDVMGPTLNHLSNLLRLPFGCGEQNMIHFAPNVFVLKYLQKTRQLS 1214
Query: 618 AEIKSKAIRYLNTGYQRQLLYKHYDGSYSTFGEHYGRSEGNTWLTAFVMKTFAQARTYIF 797
E++ + +L GYQRQL YKH DGSYS FGE G+ WLTAFV+K+FAQAR++IF
Sbjct: 1215 PEVERETTDHLVQGYQRQLTYKHQDGSYSAFGER--DESGSMWLTAFVLKSFAQARSFIF 1272
Query: 798 IDETHITEALTWLSQKQKDNGCFRSSGSLLNNAIKGGVDDEVTLSAYV 941
ID + A W+ Q+Q+ +G F + G +LN I+GG+ V L+AYV
Sbjct: 1273 IDPLELEAAKDWIVQQQQADGSFPAVGRILNKDIQGGIHGTVPLTAYV 1320
Score = 49.3 bits (116), Expect = 7e-06
Identities = 34/144 (23%), Positives = 60/144 (41%), Gaps = 12/144 (8%)
Frame = +3
Query: 3 FVELTMPYSVIRGEGFTLKATVFNYLPKCIRV--SVHLMDSPAFLAVPEEKEEKAHCICG 176
F++ T+P V+RGE + +++NY+ C V + + F+ P ++
Sbjct: 851 FIDFTLPPYVVRGEQAKIPLSIYNYMDTCAEVYMKISVPKGIQFVGHPGKRHLTKKMCVA 910
Query: 177 NGRQTVSWAVTP-KSLEKVNFTVTAEALSSQELCGTEAAMVPEYGR---------KDTII 326
+G W V L N T A A C ++ P +D I
Sbjct: 911 SGETEPMWVVLSFGDLGLSNITAKALAYRETSCCRDGKSVRPPEENYADRRVPIGRDHIR 970
Query: 327 KSLLVEPEGLEKEVTFNSLLCPSD 398
S++VEPEG + T+++ CP++
Sbjct: 971 CSVMVEPEGAPRSYTYSAFFCPNE 994
>ref|XP_609516.3| PREDICTED: C3 and PZP-like, alpha-2-macroglobulin domain containing
8, partial [Bos taurus].
Length = 1863
Score = 187 bits (474), Expect = 2e-47
Identities = 108/288 (37%), Positives = 163/288 (56%), Gaps = 20/288 (6%)
Frame = +3
Query: 138 PEEKEEKAHCICGNGRQTVSWAVTPKSLEKVNFTVTAEALSSQEL----CGTEAAMV--- 296
P++ + G + T SW T K E V T TA+ LS E + ++
Sbjct: 1060 PQDTAGMIEIVLGGHQNTRSWISTSKMGEPVASTPTAKILSWDEFRTFWISWHSGLIQVG 1119
Query: 297 --PEYGRKDTIIKSLLVEPEGLEKEVTFNS-----------LLCPSDAGASEQLSLKLPP 437
PE + I+ L +P ++ + F++ +D SE +L +P
Sbjct: 1120 HGPEPSNESVIMAWTLPKPPEVQF-IGFSTGWGSVGEFRIWRKVEADESYSEAFTLGVPH 1178
Query: 438 NVVEDSARAFFSVLGDLLGSAMRNTQNLLQMPYGCGEQNMVLFAPNIYVLDYLNETQQLT 617
+ + S RA S++GD++G + + NLL++P+GCGEQNM+ FAPN++VL YL +T+QL+
Sbjct: 1179 SAIPGSERAAASIIGDVMGPTLNHLSNLLRLPFGCGEQNMIHFAPNVFVLKYLQKTRQLS 1238
Query: 618 AEIKSKAIRYLNTGYQRQLLYKHYDGSYSTFGEHYGRSEGNTWLTAFVMKTFAQARTYIF 797
E++ + +L GYQRQL YKH DGSYS FGE G+ WLTAFV+K+FAQAR++IF
Sbjct: 1239 PEVERETTDHLVQGYQRQLTYKHQDGSYSAFGER--DESGSMWLTAFVLKSFAQARSFIF 1296
Query: 798 IDETHITEALTWLSQKQKDNGCFRSSGSLLNNAIKGGVDDEVTLSAYV 941
ID + A W+ Q+Q+ +G F + G +LN I+GG+ V L+AYV
Sbjct: 1297 IDPLELEAAKDWIVQQQQADGSFPAVGRILNKDIQGGIHGTVPLTAYV 1344
Score = 49.3 bits (116), Expect = 7e-06
Identities = 34/144 (23%), Positives = 60/144 (41%), Gaps = 12/144 (8%)
Frame = +3
Query: 3 FVELTMPYSVIRGEGFTLKATVFNYLPKCIRV--SVHLMDSPAFLAVPEEKEEKAHCICG 176
F++ T+P V+RGE + +++NY+ C V + + F+ P ++
Sbjct: 875 FIDFTLPPYVVRGEQAKIPLSIYNYMDTCAEVYMKISVPKGIQFVGHPGKRHLTKKMCVA 934
Query: 177 NGRQTVSWAVTP-KSLEKVNFTVTAEALSSQELCGTEAAMVPEYGR---------KDTII 326
+G W V L N T A A C ++ P +D I
Sbjct: 935 SGETEPMWVVLSFGDLGLSNITAKALAYRETSCCRDGKSVRPPEENYADRRVPIGRDHIR 994
Query: 327 KSLLVEPEGLEKEVTFNSLLCPSD 398
S++VEPEG + T+++ CP++
Sbjct: 995 CSVMVEPEGAPRSYTYSAFFCPNE 1018
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 51,113,436
Number of extensions: 1429247
Number of successful extensions: 4424
Number of sequences better than 1.0e-05: 16
Number of HSP's gapped: 4387
Number of HSP's successfully gapped: 23
Length of query: 416
Length of database: 17,681,374
Length adjustment: 105
Effective length of query: 311
Effective length of database: 14,207,134
Effective search space: 4418418674
Effective search space used: 4418418674
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007229
(1248 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_534893.2| PREDICTED: similar to Alpha-2-macroglobulin pre... 555 e-158
Alignment gi|XP_854220.1| PREDICTED: similar to pregnancy-zone protein [C... 480 e-135
Alignment gi|XP_543824.2| PREDICTED: similar to Alpha-2-macroglobulin pre... 343 2e-94
Alignment gi|XP_854216.1| PREDICTED: similar to Alpha-2-macroglobulin pre... 280 2e-75
Alignment gi|XP_532205.2| PREDICTED: similar to CD109 [Canis familiaris]. 217 2e-56
Alignment gi|XP_852711.1| PREDICTED: similar to C3 and PZP-like, alpha-2-... 187 2e-47
Alignment gi|XP_533932.2| PREDICTED: similar to Complement C3 precursor [... 112 1e-24
Alignment gi|XP_538843.2| PREDICTED: similar to Complement C4 precursor [... 107 2e-23
>ref|XP_534893.2| PREDICTED: similar to Alpha-2-macroglobulin precursor (Alpha-2-M)
[Canis familiaris].
Length = 2036
Score = 555 bits (1430), Expect = e-158
Identities = 292/422 (69%), Positives = 321/422 (76%), Gaps = 7/422 (1%)
Frame = +3
Query: 3 FVELTMPYSVIRGEGFTLKATVFNYLPKCIRVSVHLMDSPAFLAVPEEKEEKAHCICGNG 182
FVELTMPYSVIRGE F LKATV NYL KCIRVSV L +PAFL +EKE+++HCICGNG
Sbjct: 1357 FVELTMPYSVIRGEAFNLKATVLNYLSKCIRVSVQLDPNPAFLV--QEKEQESHCICGNG 1414
Query: 183 RQTVSWAVTPKSLEKVNFTVTAEALSSQELCGTEAAMVPEYGRKDTIIKSLLVEPEGLEK 362
RQTVSWAVTPK+L VNFTV+AEAL SQELCGTE +VPEYG+KDTIIKSLLVEPEGLE
Sbjct: 1415 RQTVSWAVTPKALGNVNFTVSAEALESQELCGTEVTVVPEYGKKDTIIKSLLVEPEGLET 1474
Query: 363 EVTFNSLLCPSDAGASEQLSLKLPPNVVEDSARAFFSVLGDLLGSAMRNTQNLLQMPYGC 542
E TFNSLLC SDA SEQLSLKLP NVVE+SARA SVLGD+LGSAM+N QNLL+MPYGC
Sbjct: 1475 ETTFNSLLCASDAEVSEQLSLKLPKNVVEESARASISVLGDILGSAMQNIQNLLRMPYGC 1534
Query: 543 GEQNMVLFAPNIYVLDYLNETQQLTAEIKSKAIRYLNTGYQRQLLYKHYDGSYSTFGEHY 722
GEQNMVLFAPNIYVL+YLN+T QLT E+ SKAI YLNTGYQRQL YKH DGSYSTFGE Y
Sbjct: 1535 GEQNMVLFAPNIYVLNYLNKTHQLTPEVMSKAIGYLNTGYQRQLKYKHRDGSYSTFGEQY 1594
Query: 723 GRSEGNTWLTAFVMKTFAQARTYIFIDETHITEALTWLSQKQKDNGCFRSSGSLLNNAIK 902
G+++GNTWLTAFV+KTFAQART+IFIDE HIT+AL WLSQKQKDNGCFRSSGSLLNNAIK
Sbjct: 1595 GKNKGNTWLTAFVLKTFAQARTHIFIDEAHITQALMWLSQKQKDNGCFRSSGSLLNNAIK 1654
Query: 903 GGVDDEVTLSAYVXXXXXXXXXXXXXXXXXVPC----SAWRQPGSQPRRDPKVACLHQST 1070
GGV+DEVTLSAYV SAW+ P H T
Sbjct: 1655 GGVEDEVTLSAYVTIALLEIPLSTTHPVVRSALFCLESAWKSAKEGPHGK------HVYT 1708
Query: 1071 AGLRLWPGGLPGKEE---GVLQSLXAEAVKEGDFIHWTPTQKPEAPVQHFYXPRXASAEV 1241
L + L G +E +L L EAVKE +HW QKP APV+ FY PR SAEV
Sbjct: 1709 KALLAYAFALAGNQEKRREILTLLNEEAVKEESSVHWERPQKPRAPVERFYQPRAPSAEV 1768
Query: 1242 EM 1247
EM
Sbjct: 1769 EM 1770
Score = 65.5 bits (158), Expect = 1e-10
Identities = 40/89 (44%), Positives = 49/89 (55%), Gaps = 22/89 (24%)
Frame = +3
Query: 228 VNFTVTAEALSSQELCGTEAAMVPEYGRKDTIIKSLLVE--------------------- 344
VNF+V+AEA+ LCG E A VPE GRKD +IK+LLVE
Sbjct: 381 VNFSVSAEAVQFLALCGNEVAEVPEIGRKDMVIKTLLVEVSRSRPLHYFSETLRIVTMKS 440
Query: 345 -PEGLEKEVTFNSLLCPSDAGASEQLSLK 428
PEG+E+E TFNS+ C S G QL+ K
Sbjct: 441 MPEGIEQEKTFNSMTCTS--GYQRQLNYK 467
>ref|XP_854220.1| PREDICTED: similar to pregnancy-zone protein [Canis familiaris].
Length = 1506
Score = 480 bits (1236), Expect = e-135
Identities = 256/431 (59%), Positives = 305/431 (70%), Gaps = 16/431 (3%)
Frame = +3
Query: 3 FVELTMPYSVIRGEGFTLKATVFNYLPKCIRVSVHLMDSPAFLAVPEEKEEKAHCICGNG 182
F+ELT+PYSV+RGE FTLKATVFNYL CIRVSV L SP A E K E+ CICGN
Sbjct: 815 FLELTLPYSVVRGEAFTLKATVFNYLSHCIRVSVQLEASPDKSADLERKNEETPCICGNH 874
Query: 183 RQTVSWAVTPKSLEKVNFTVTAEALSSQELCGTEAAMVPEYGRKDTIIKSLLVEPEGLEK 362
++T+ WAVTPKSL K+NFT T EAL SQELCG E VPE G+KDT++K LLVEPEG+EK
Sbjct: 875 QKTMFWAVTPKSLGKMNFTATVEALQSQELCGNEVPRVPELGQKDTVVKPLLVEPEGIEK 934
Query: 363 EVTFNSLLCPSDAGASEQLSLKLPPNVVEDSARAFFSVLGDLLGSAMRNTQNLLQMPYGC 542
E TFN+LLC ++ E+LSLK+P +VVE SARA +SVLGD+LGSAM+N QNLL+MPYGC
Sbjct: 935 EETFNTLLCAAETDVPEKLSLKVPSDVVEGSARATYSVLGDILGSAMQNLQNLLRMPYGC 994
Query: 543 GEQNMVLFAPNIYVLDYLNETQQLTAEIKSKAIRYLNTGYQRQLLYKHYDGSYSTFGEHY 722
GEQNMVLF PNIYVL+YLNET+QLT IKSKAI YL +GYQRQL YKH DGSYSTFG+H
Sbjct: 995 GEQNMVLFVPNIYVLNYLNETRQLTETIKSKAINYLISGYQRQLNYKHSDGSYSTFGDHD 1054
Query: 723 GRSEGNTWLTAFVMKTFAQARTYIFIDETHITEALTWLSQKQKDNGCFRSSGSLLNNAIK 902
GRS+GNTWLTAFV+K+FAQAR++IF++ +HIT +LTWLSQ+QK+NGCF+ SGSLLNNA+K
Sbjct: 1055 GRSQGNTWLTAFVLKSFAQARSHIFVEMSHITSSLTWLSQRQKENGCFQRSGSLLNNAVK 1114
Query: 903 GGVDDEVTLSAYVXXXXXXXXXXXXXXXXXVPCSAWRQPGSQPRRDPKVACLHQS----- 1067
GGVDDE+TLSAY+ + P + P + CL +
Sbjct: 1115 GGVDDELTLSAYI----------------TIALLEMPLPVTHPLVRNALFCLESAWGSIS 1158
Query: 1068 --------TAGLRLWPGGLPG---KEEGVLQSLXAEAVKEGDFIHWTPTQKPEAPVQHFY 1214
T L + L G K +L+SL +AVKE D IHW K E V FY
Sbjct: 1159 EAQGSLVYTKALLAYAFALAGNQVKRNELLKSLDKDAVKEEDSIHWQRPGKVE-EVTTFY 1217
Query: 1215 XPRXASAEVEM 1247
PR S EVEM
Sbjct: 1218 QPRAPSVEVEM 1228
>ref|XP_543824.2| PREDICTED: similar to Alpha-2-macroglobulin precursor (Alpha-2-M)
[Canis familiaris].
Length = 1449
Score = 343 bits (880), Expect = 2e-94
Identities = 180/416 (43%), Positives = 254/416 (61%), Gaps = 3/416 (0%)
Frame = +3
Query: 3 FVELTMPYSVIRGEGFTLKATVFNYLPKCIRVSVHLMDSPAFLAVPEEKEEKAHCICGNG 182
FV+LT+PYSV+RGE F L AT+FNYL CIRV +L S + + + C+C +
Sbjct: 786 FVDLTLPYSVVRGESFRLTATIFNYLKDCIRVQTNLATSDKYQVESWTDSQGSSCLCADE 845
Query: 183 RQTVSWAVTPKSLEKVNFTVTAEALSSQELCGTEAAMVPEYGRKDTIIKSLLVEPEGLEK 362
+T W +T L VNFT+T + L S ELC E +P G+ DT+IK +LV+PEG+
Sbjct: 846 AKTYHWNITAIKLGHVNFTITTKILDSSELCRGEKGFIPAKGQSDTLIKPVLVKPEGVLV 905
Query: 363 EVTFNSLLCPSDAGASEQLSLKLPPNVVEDSARAFFSVLGDLLGSAMRNTQNLLQMPYGC 542
E T++SLLCP ASE +SL+LP +VV DS +A+ +VLGD++G+A++N NL+QMP GC
Sbjct: 906 EKTYSSLLCPKGQVASESISLELPVDVVPDSTKAYVTVLGDIMGTALQNLDNLVQMPRGC 965
Query: 543 GEQNMVLFAPNIYVLDYLNETQQLTAEIKSKAIRYLNTGYQRQLLYKHYDGSYSTFGEHY 722
GEQNMVLFAP IYVL YL + LT EIKS+A+ +L GYQ++L+YKH +GSYS FGE
Sbjct: 966 GEQNMVLFAPIIYVLQYLERARLLTEEIKSQAVGFLKIGYQKELMYKHSNGSYSAFGEQD 1025
Query: 723 GRSEGNTWLTAFVMKTFAQARTYIFIDETHITEALTWLSQKQKDNGCFRSSGSLLNNAIK 902
G +GNTWLTAFV K F QA+ +IFID+ +I +AL W++ Q NGC+ + G+L++ A+K
Sbjct: 1026 G--DGNTWLTAFVTKCFGQAQEFIFIDDKNIQDALKWMAGNQLPNGCYANVGNLIHTAMK 1083
Query: 903 GGVDDEVTLSAYVXXXXXXXXXXXXXXXXXVPCSAWRQPGSQPRRDPKVACLHQSTAGLR 1082
GGV+DE++L+AY+ G + RD + + T GL
Sbjct: 1084 GGVEDEISLTAYITAALLEMGMTAHDPMV--------SQGLKCLRDSVSSTTNLYTQGLL 1135
Query: 1083 LWPGGLPGK---EEGVLQSLXAEAVKEGDFIHWTPTQKPEAPVQHFYXPRXASAEV 1241
+ L G+ +L+ L +A+ G IHW+ P + + P E+
Sbjct: 1136 AYTFSLAGEMDIRNVLLEKLDQQAIISGGSIHWSQKPIPSLDDRPWSQPEAVDVEL 1191
>ref|XP_854216.1| PREDICTED: similar to Alpha-2-macroglobulin precursor (Alpha-2-M)
[Canis familiaris].
Length = 1699
Score = 280 bits (717), Expect = 2e-75
Identities = 149/299 (49%), Positives = 193/299 (64%), Gaps = 1/299 (0%)
Frame = +3
Query: 3 FVELTMPYSVIRGEGFTLKATVFNYLPKCIRVSVHLMDSPAFLA-VPEEKEEKAHCICGN 179
FVE+T+P+SV+R E L VF+YL C+ +SV L S F A + + I
Sbjct: 1060 FVEMTLPFSVVRNEQSDLIVNVFSYLNTCVEISVQLEASQDFEANISTPINNGSEVIQAG 1119
Query: 180 GRQTVSWAVTPKSLEKVNFTVTAEALSSQELCGTEAAMVPEYGRKDTIIKSLLVEPEGLE 359
++T W + PK L KVN TV AE+ S C EA KDT++KSLLVEPEG+E
Sbjct: 1120 EKKTYVWTLLPKILGKVNITVVAESRQSSA-CPKEATEQQNLNWKDTVVKSLLVEPEGIE 1178
Query: 360 KEVTFNSLLCPSDAGASEQLSLKLPPNVVEDSARAFFSVLGDLLGSAMRNTQNLLQMPYG 539
KE+T + L+C AS+Q+ L LP NVVE SARAF +V+GD+LG AM+N +NLLQMPYG
Sbjct: 1179 KEMTQSFLICTKGTKASKQVVLDLPNNVVEGSARAFVTVVGDILGLAMQNLENLLQMPYG 1238
Query: 540 CGEQNMVLFAPNIYVLDYLNETQQLTAEIKSKAIRYLNTGYQRQLLYKHYDGSYSTFGEH 719
CGEQN+ L A + YVLDYL TQQLT E+KSKA +L+ GYQ+QL +K++DGSYS F +
Sbjct: 1239 CGEQNIALLASDTYVLDYLKSTQQLTEEVKSKAFFFLSNGYQKQLSFKNFDGSYSVFWQK 1298
Query: 720 YGRSEGNTWLTAFVMKTFAQARTYIFIDETHITEALTWLSQKQKDNGCFRSSGSLLNNA 896
+G+ WL+A KT + + Y++IDE E L WLS KQ NGCF S G + NNA
Sbjct: 1299 --NQKGSIWLSALTFKTLERMKEYVYIDEHIQRETLIWLSSKQNINGCFESDGKVFNNA 1355
>ref|XP_532205.2| PREDICTED: similar to CD109 [Canis familiaris].
Length = 1471
Score = 217 bits (553), Expect = 2e-56
Identities = 122/322 (37%), Positives = 182/322 (56%), Gaps = 9/322 (2%)
Frame = +3
Query: 3 FVELTMPYSVIRGEGFTLKATVFNYLPKCIRVSVHLMDSPAFLAVPEEKE------EKAH 164
F+ L +PYS+IRGE F L+ T+FNYL V V + S F + E ++
Sbjct: 775 FIFLNLPYSIIRGEEFALEVTIFNYLKDATEVEVIIEKSDKFDILMASNEINVTGHQQTI 834
Query: 165 CICGNGRQTVSWAVTPKSLEKVNFTVTAEALSSQELCGTEAAMVPEYGRKDTIIKSLLVE 344
+ TV + + P L ++ TVTA + ++ D + + +LV+
Sbjct: 835 LVPSEDGATVLFPIRPTYLGEIPITVTAISPTAS----------------DAVTQKILVK 878
Query: 345 PEGLEKEVTFNSLLCPSDAGAS---EQLSLKLPPNVVEDSARAFFSVLGDLLGSAMRNTQ 515
EG+EK + + LL +D + LS PPN V S R + +GD+LGS++
Sbjct: 879 AEGIEKSYSQSILLDLTDNKLQTPLKTLSFSFPPNTVSGSERVQITAVGDILGSSINGLA 938
Query: 516 NLLQMPYGCGEQNMVLFAPNIYVLDYLNETQQLTAEIKSKAIRYLNTGYQRQLLYKHYDG 695
+L++MPYGCGEQNM+ FAPNIYVLDYL + +QLT +K KA+ ++ GYQR+LLY+ DG
Sbjct: 939 SLIRMPYGCGEQNMINFAPNIYVLDYLTKKRQLTENLKEKALSFMRQGYQRELLYQREDG 998
Query: 696 SYSTFGEHYGRSEGNTWLTAFVMKTFAQARTYIFIDETHITEALTWLSQKQKDNGCFRSS 875
S+S FG G+TWL+AFV++ F +A YI ID+ + TWL +QK NG F
Sbjct: 999 SFSAFGN--DDPSGSTWLSAFVLRCFLEADPYIDIDQNVLHRTYTWLKGRQKSNGEFWEP 1056
Query: 876 GSLLNNAIKGGVDDEVTLSAYV 941
G ++++ ++GG VTL+AY+
Sbjct: 1057 GRVIHSELQGGNKSPVTLTAYI 1078
>ref|XP_852711.1| PREDICTED: similar to C3 and PZP-like, alpha-2-macroglobulin domain
containing 8 [Canis familiaris].
Length = 1746
Score = 187 bits (474), Expect = 2e-47
Identities = 112/304 (36%), Positives = 166/304 (54%), Gaps = 20/304 (6%)
Frame = +3
Query: 90 IRVSVHLMDSPAFLAVPEEKEEKAHCICGNGRQTVSWAVTPKSLEKVNFTVTAEALSSQE 269
+ V H A A P++ + G + T SW T K + V T TA+ LS E
Sbjct: 972 VAVRAHNDARVALSAGPQDTAGMIEIVLGGHQNTRSWISTSKMGDPVASTHTAKILSWDE 1031
Query: 270 LCG---------TEAAMVPEYGRKDTIIKSLLVEPEGLEKEVTFNS-----------LLC 389
+ PE + I+ L P + + + F++
Sbjct: 1032 FRTFWISWHGGFIQVGHGPEPSNESVIMAWTLPRPPEV-RFIGFSTGWGSMGEFRIWKKV 1090
Query: 390 PSDAGASEQLSLKLPPNVVEDSARAFFSVLGDLLGSAMRNTQNLLQMPYGCGEQNMVLFA 569
D SE +L +P + + S RA SV+GD++G + + NLL++P+GCGEQNM+ FA
Sbjct: 1091 EVDESYSEAFTLGVPHSAIPGSERAVASVIGDVMGPTLNHLSNLLRLPFGCGEQNMIHFA 1150
Query: 570 PNIYVLDYLNETQQLTAEIKSKAIRYLNTGYQRQLLYKHYDGSYSTFGEHYGRSEGNTWL 749
PNI+VL YL +T+QL++E++ + YL GYQRQL Y+H DGSYS FGE + G+ WL
Sbjct: 1151 PNIFVLKYLQKTRQLSSEVEQETTDYLVQGYQRQLTYRHRDGSYSAFGER--DASGSMWL 1208
Query: 750 TAFVMKTFAQARTYIFIDETHITEALTWLSQKQKDNGCFRSSGSLLNNAIKGGVDDEVTL 929
TAFV+K+FAQAR++IFID + A W+ ++Q+ +G F + G +LN I+GG+ V L
Sbjct: 1209 TAFVLKSFAQARSFIFIDPQELEAAKGWIVRQQRADGSFPAVGRILNKDIQGGIHGTVPL 1268
Query: 930 SAYV 941
+AYV
Sbjct: 1269 TAYV 1272
Score = 51.2 bits (121), Expect = 2e-06
Identities = 37/145 (25%), Positives = 67/145 (46%), Gaps = 13/145 (8%)
Frame = +3
Query: 3 FVELTMPYSVIRGEGFTLKATVFNYLPKC--IRVSVHLMDSPAFLAVPEEKEEKAHCICG 176
FV+ T+P V+RGE + +++NY+ C + V + + F+ P ++
Sbjct: 803 FVDFTLPPHVVRGEQAKVPLSIYNYMGTCAEVYVKISVPKGIRFVGHPGKRHLTKKMCVA 862
Query: 177 NGRQTVSWAVTPKSLEKVNFTVTAEALSSQEL-CGTEAAMVPEYGR----------KDTI 323
+G +W V S ++ VTA+AL+ E C + V +D I
Sbjct: 863 SGEMEPAWVVLSFSDLGIS-NVTAKALAYGETSCCRDGQSVKHAEESFADRRVPTGRDHI 921
Query: 324 IKSLLVEPEGLEKEVTFNSLLCPSD 398
+S++VEPEG + T++ CP++
Sbjct: 922 RRSVMVEPEGAPRAYTYSVFFCPNE 946
>ref|XP_533932.2| PREDICTED: similar to Complement C3 precursor [Canis familiaris].
Length = 1549
Score = 112 bits (279), Expect = 1e-24
Identities = 86/334 (25%), Positives = 157/334 (47%), Gaps = 21/334 (6%)
Frame = +3
Query: 3 FVELTMPYSVIRGEGFTLKATVFNYLPK-CIRVSVHLMDSPAFLAVPEEKEEKAHCICGN 179
F++L +PYSV+R E ++A ++NY + I+V V L+ +PAF ++ K+ +
Sbjct: 831 FIDLRLPYSVVRNEQVEIRAILYNYQEREDIKVRVELLYNPAFCSLATSKKSYQQIV--- 887
Query: 180 GRQTVSWAVTPKSLEKVNFTVTAEALSSQELCGTEAAMVPEYGRKDTIIKSLLVEPEGLE 359
+ KS V++ + + E+ A V + D + K L V PEG+
Sbjct: 888 -------NIPAKSSVAVSYVIVPLKIGLHEV--EVKAAVYRHFANDGVKKILKVVPEGIL 938
Query: 360 KEVTFNSLLCPSDAGASEQLSLK------LPPNVVEDSARAFFSVLGDLLGSAMRNT--- 512
T +A E + + L V + + + G + + +
Sbjct: 939 VNQTLAIRTLDPEAKGQEGVQREEVHAADLGDQVPDTESETRILLQGTPVAQMVEDAIDG 998
Query: 513 ---QNLLQMPYGCGEQNMVLFAPNIYVLDYLNETQQ---LTAEIKSKAIRYLNTGYQRQL 674
++L+ P GCGEQNM+ P + L YL++T+Q E + +A+ + GY +QL
Sbjct: 999 DRLKHLIVTPSGCGEQNMIGMTPTVIALHYLDQTEQWDKFGLEKRQEALELIKKGYTQQL 1058
Query: 675 LYKHYDGSYSTFGEHYGRSEGNTWLTAFVMKTFAQARTYIFIDETHITEALTWL-SQKQK 851
++ + +++ F +TWLTA+V+K F+ A I I+ + A+ WL +KQK
Sbjct: 1059 AFRQPNSAFAAFQNR----PSSTWLTAYVVKVFSLATNLIAIEAQVLCGAVKWLILEKQK 1114
Query: 852 DNGCFRSSGSLLNNAIKGGV----DDEVTLSAYV 941
+G F+ G +++ + GG + V+L+A+V
Sbjct: 1115 PDGIFQEDGPVIHQEMTGGFREAEEKSVSLTAFV 1148
>ref|XP_538843.2| PREDICTED: similar to Complement C4 precursor [Canis familiaris].
Length = 1587
Score = 107 bits (268), Expect = 2e-23
Identities = 95/333 (28%), Positives = 156/333 (46%), Gaps = 21/333 (6%)
Frame = +3
Query: 6 VELTMPYSVIRGEGFTLKATVFNYLPKCIRVSVHLMDSPAFLAVPEEKEEKAHCICGNGR 185
+ L +P S+ R E L+ ++NYL + VSVH+ SP + C+ G G
Sbjct: 676 LHLRLPVSIRRFEQLELRPVLYNYLKDNLTVSVHV--SPV----------EGLCLAGGGG 723
Query: 186 QTVSWAVTPKSLEKVNFTVTAEALSSQELCGTEAAMVPEYGRKDTIIKSLLVEPEGL--E 359
S V S V+F+V A ++ L A ++ D + K L ++ EG
Sbjct: 724 LAQSVLVPAGSARPVSFSVVPTAATAVSL-KVVARGSWDFPVGDAVSKVLQIQKEGAIHT 782
Query: 360 KEVTFNSLLCPSDAGASEQLSLKLP----PNVVEDS-----ARAFFSVLGDLLGS----A 500
+E+ + L P D A +L++P PN++ D R S D GS +
Sbjct: 783 EEIVYE--LNPLDHRAR---TLEIPGSSDPNIIPDGDFSSLVRVTASHPLDTWGSKGVLS 837
Query: 501 MRNTQNLLQMPYGCGEQNMVLFAPNIYVLDYLNETQQ---LTAEIKSKAIRYLNTGYQRQ 671
+LL++P GCGEQ M+ AP + YL++T+Q L E K A+ + GY R
Sbjct: 838 PGGLASLLRLPQGCGEQTMIYLAPTLAASRYLDKTEQWSTLPPETKDHAVDLIQKGYMRI 897
Query: 672 LLYKHYDGSYSTFGEHYGRSEGNTWLTAFVMKTFAQARTYIFIDETHITEALTWLSQKQK 851
++ +GSY + + +TWLTAFV+K + A+ + + E WL +Q+
Sbjct: 898 QQFRKTNGSYGAWLHR----DSSTWLTAFVLKVLSLAQEQVGGSPEKLQETAKWLLSQQQ 953
Query: 852 DNGCFRSSGSLLNNAIKGGV---DDEVTLSAYV 941
+G F+ +L+ ++GG+ D+ V L+A+V
Sbjct: 954 ADGSFQDPCPVLHRGMQGGLVGDDETVALTAFV 986
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 53,159,554
Number of extensions: 1458429
Number of successful extensions: 4610
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 4585
Number of HSP's successfully gapped: 12
Length of query: 416
Length of database: 18,874,504
Length adjustment: 105
Effective length of query: 311
Effective length of database: 15,374,224
Effective search space: 4781383664
Effective search space used: 4781383664
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007229
(1248 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_000005.2| alpha-2-macroglobulin precursor [Homo sapiens]. 581 e-166
Alignment gi|NP_002855.2| pregnancy zone protein precursor [Homo sapiens]. 523 e-148
Alignment gi|NP_653271.2| alpha-2-macroglobulin-like protein 1 precursor ... 330 2e-90
Alignment gi|XP_002343192.1| PREDICTED: ovostatin homolog 2 [Homo sapiens]. 273 2e-73
Alignment gi|XP_001715949.2| PREDICTED: LOW QUALITY PROTEIN: ovostatin ho... 266 4e-71
Alignment gi|NP_001153060.1| CD109 antigen isoform 3 precursor [Homo sapi... 215 6e-56
Alignment gi|NP_001153059.1| CD109 antigen isoform 2 precursor [Homo sapi... 215 6e-56
Alignment gi|NP_598000.2| CD109 antigen isoform 1 precursor [Homo sapiens]. 215 6e-56
Alignment gi|NP_056507.2| C3 and PZP-like alpha-2-macroglobulin domain-co... 185 9e-47
Alignment gi|NP_000055.2| complement C3 precursor [Homo sapiens]. 116 4e-26
>ref|NP_000005.2| alpha-2-macroglobulin precursor [Homo sapiens].
Length = 1474
Score = 581 bits (1497), Expect = e-166
Identities = 305/424 (71%), Positives = 329/424 (77%), Gaps = 9/424 (2%)
Frame = +3
Query: 3 FVELTMPYSVIRGEGFTLKATVFNYLPKCIRVSVHLMDSPAFLAVPEEKEEKAHCICGNG 182
FVELTMPYSVIRGE FTLKATV NYLPKCIRVSV L SPAFLAVP EKE+ HCIC NG
Sbjct: 793 FVELTMPYSVIRGEAFTLKATVLNYLPKCIRVSVQLEASPAFLAVPVEKEQAPHCICANG 852
Query: 183 RQTVSWAVTPKSLEKVNFTVTAEALSSQELCGTEAAMVPEYGRKDTIIKSLLVEPEGLEK 362
RQTVSWAVTPKSL VNFTV+AEAL SQELCGTE VPE+GRKDT+IK LLVEPEGLEK
Sbjct: 853 RQTVSWAVTPKSLGNVNFTVSAEALESQELCGTEVPSVPEHGRKDTVIKPLLVEPEGLEK 912
Query: 363 EVTFNSLLCPSDAGASEQLSLKLPPNVVEDSARAFFSVLGDLLGSAMRNTQNLLQMPYGC 542
E TFNSLLCPS SE+LSLKLPPNVVE+SARA SVLGD+LGSAM+NTQNLLQMPYGC
Sbjct: 913 ETTFNSLLCPSGGEVSEELSLKLPPNVVEESARASVSVLGDILGSAMQNTQNLLQMPYGC 972
Query: 543 GEQNMVLFAPNIYVLDYLNETQQLTAEIKSKAIRYLNTGYQRQLLYKHYDGSYSTFGEHY 722
GEQNMVLFAPNIYVLDYLNETQQLT EIKSKAI YLNTGYQRQL YKHYDGSYSTFGE Y
Sbjct: 973 GEQNMVLFAPNIYVLDYLNETQQLTPEIKSKAIGYLNTGYQRQLNYKHYDGSYSTFGERY 1032
Query: 723 GRSEGNTWLTAFVMKTFAQARTYIFIDETHITEALTWLSQKQKDNGCFRSSGSLLNNAIK 902
GR++GNTWLTAFV+KTFAQAR YIFIDE HIT+AL WLSQ+QKDNGCFRSSGSLLNNAIK
Sbjct: 1033 GRNQGNTWLTAFVLKTFAQARAYIFIDEAHITQALIWLSQRQKDNGCFRSSGSLLNNAIK 1092
Query: 903 GGVDDEVTLSAYVXXXXXXXXXXXXXXXXXVPC----SAWR--QPGSQPRRDPKVACLHQ 1064
GGV+DEVTLSAY+ SAW+ Q G H
Sbjct: 1093 GGVEDEVTLSAYITIALLEIPLTVTHPVVRNALFCLESAWKTAQEGDHGS--------HV 1144
Query: 1065 STAGLRLWPGGLPG---KEEGVLQSLXAEAVKEGDFIHWTPTQKPEAPVQHFYXPRXASA 1235
T L + L G K + VL+SL EAVK+ + +HW QKP+APV HFY P+ SA
Sbjct: 1145 YTKALLAYAFALAGNQDKRKEVLKSLNEEAVKKDNSVHWERPQKPKAPVGHFYEPQAPSA 1204
Query: 1236 EVEM 1247
EVEM
Sbjct: 1205 EVEM 1208
>ref|NP_002855.2| pregnancy zone protein precursor [Homo sapiens].
Length = 1482
Score = 523 bits (1348), Expect = e-148
Identities = 276/422 (65%), Positives = 312/422 (73%), Gaps = 7/422 (1%)
Frame = +3
Query: 3 FVELTMPYSVIRGEGFTLKATVFNYLPKCIRVSVHLMDSPAFLAVPEEKEEKAHCICGNG 182
FVELTMPYSVIRGE FTLKATV NYLPKCIRVSV L SPAFLA K E+++CICGN
Sbjct: 799 FVELTMPYSVIRGEVFTLKATVLNYLPKCIRVSVQLKASPAFLASQNTKGEESYCICGNE 858
Query: 183 RQTVSWAVTPKSLEKVNFTVTAEALSSQELCGTEAAMVPEYGRKDTIIKSLLVEPEGLEK 362
RQT+SW VTPK+L VNF+V+AEA+ S ELCG E VPE RKDT+IK+LLVE EG+E+
Sbjct: 859 RQTLSWTVTPKTLGNVNFSVSAEAMQSLELCGNEVVEVPEIKRKDTVIKTLLVEAEGIEQ 918
Query: 363 EVTFNSLLCPSDAGASEQLSLKLPPNVVEDSARAFFSVLGDLLGSAMRNTQNLLQMPYGC 542
E TF+S+ C S A SEQLSLKLP NVV++SARA FSVLGD+LGSAM+N QNLLQMPYGC
Sbjct: 919 EKTFSSMTCASGANVSEQLSLKLPSNVVKESARASFSVLGDILGSAMQNIQNLLQMPYGC 978
Query: 543 GEQNMVLFAPNIYVLDYLNETQQLTAEIKSKAIRYLNTGYQRQLLYKHYDGSYSTFGEHY 722
GEQNMVLFAPNIYVL+YLNETQQLT EIK+KA+ YL TGYQRQL YKH DGSYSTFGE Y
Sbjct: 979 GEQNMVLFAPNIYVLNYLNETQQLTQEIKAKAVGYLITGYQRQLNYKHQDGSYSTFGERY 1038
Query: 723 GRSEGNTWLTAFVMKTFAQARTYIFIDETHITEALTWLSQKQKDNGCFRSSGSLLNNAIK 902
GR++GNTWLTAFV+KTFAQAR+YIFIDE HIT++LTWLSQ QKDNGCFRSSGSLLNNAIK
Sbjct: 1039 GRNQGNTWLTAFVLKTFAQARSYIFIDEAHITQSLTWLSQMQKDNGCFRSSGSLLNNAIK 1098
Query: 903 GGVDDEVTLSAYVXXXXXXXXXXXXXXXXXVPC----SAWRQPGSQPRRDPKVACLHQST 1070
GGV+DE TLSAYV SAW H T
Sbjct: 1099 GGVEDEATLSAYVTIALLEIPLPVTNPIVRNALFCLESAWNVAKEGTHGS------HVYT 1152
Query: 1071 AGLRLWPGGLPGKE---EGVLQSLXAEAVKEGDFIHWTPTQKPEAPVQHFYXPRXASAEV 1241
L + L GK+ +L SL EAVKE + +HW Q+P+APV H Y + SAEV
Sbjct: 1153 KALLAYAFSLLGKQNQNREILNSLDKEAVKEDNLVHWERPQRPKAPVGHLYQTQAPSAEV 1212
Query: 1242 EM 1247
EM
Sbjct: 1213 EM 1214
>ref|NP_653271.2| alpha-2-macroglobulin-like protein 1 precursor [Homo sapiens].
Length = 1454
Score = 330 bits (846), Expect = 2e-90
Identities = 177/418 (42%), Positives = 254/418 (60%), Gaps = 3/418 (0%)
Frame = +3
Query: 3 FVELTMPYSVIRGEGFTLKATVFNYLPKCIRVSVHLMDSPAFLAVPEEKEEKAHCICGNG 182
FV+LT+PYSV+RGE F L AT+FNYL CIRV L S + + + C+C +
Sbjct: 791 FVDLTLPYSVVRGESFRLTATIFNYLKDCIRVQTDLAKSHEYQLESWADSQTSSCLCADE 850
Query: 183 RQTVSWAVTPKSLEKVNFTVTAEALSSQELCGTEAAMVPEYGRKDTIIKSLLVEPEGLEK 362
+T W +T L +NFT++ + L S E CG + VP+ GR DT+IK +LV+PEG+
Sbjct: 851 AKTHHWNITAVKLGHINFTISTKILDSNEPCGGQKGFVPQKGRSDTLIKPVLVKPEGVLV 910
Query: 363 EVTFNSLLCPSDAGASEQLSLKLPPNVVEDSARAFFSVLGDLLGSAMRNTQNLLQMPYGC 542
E T +SLLCP ASE +SL+LP ++V DS +A+ +VLGD++G+A++N L+QMP GC
Sbjct: 911 EKTHSSLLCPKGKVASESVSLELPVDIVPDSTKAYVTVLGDIMGTALQNLDGLVQMPSGC 970
Query: 543 GEQNMVLFAPNIYVLDYLNETQQLTAEIKSKAIRYLNTGYQRQLLYKHYDGSYSTFGEHY 722
GEQNMVLFAP IYVL YL + LT EI+S+A+ +L GYQ++L+YKH +GSYS FGE
Sbjct: 971 GEQNMVLFAPIIYVLQYLEKAGLLTEEIRSRAVGFLEIGYQKELMYKHSNGSYSAFGERD 1030
Query: 723 GRSEGNTWLTAFVMKTFAQARTYIFIDETHITEALTWLSQKQKDNGCFRSSGSLLNNAIK 902
G GNTWLTAFV K F QA+ +IFID +I +AL W++ Q +GC+ + G+LL+ A+K
Sbjct: 1031 G--NGNTWLTAFVTKCFGQAQKFIFIDPKNIQDALKWMAGNQLPSGCYANVGNLLHTAMK 1088
Query: 903 GGVDDEVTLSAYVXXXXXXXXXXXXXXXXXVPCSAWRQPGSQPRRDPKVACLHQSTAGLR 1082
GGVDDEV+L+AYV G + ++ + + T L
Sbjct: 1089 GGVDDEVSLTAYVTAALLEMGKDVDDPMV--------SQGLRCLKNSATSTTNLYTQALL 1140
Query: 1083 LWPGGLPGK---EEGVLQSLXAEAVKEGDFIHWTPTQKPEAPVQHFYXPRXASAEVEM 1247
+ L G+ +L+ L +A+ G+ I+W+ P + + P A+ +VE+
Sbjct: 1141 AYIFSLAGEMDIRNILLKQLDQQAIISGESIYWSQKPTPSSNASPWSEP--AAVDVEL 1196
>ref|XP_002343192.1| PREDICTED: ovostatin homolog 2 [Homo sapiens].
Length = 1394
Score = 273 bits (698), Expect = 2e-73
Identities = 165/427 (38%), Positives = 235/427 (55%), Gaps = 13/427 (3%)
Frame = +3
Query: 3 FVELTMPYSVIRGEGFTLKATVFNYLPKCIRVSVHLMDSPAFLA-VPEEKEEKAHCICGN 179
F+E+ P+SV++ E F L F+YL C+ +SV + +S + A + K + I
Sbjct: 781 FIEIASPFSVVQNEQFDLIVNAFSYLNTCVEISVQVEESQNYEANINTWKINGSEVIQAG 840
Query: 180 GRQTVSWAVTPKSLEKVNFTVTAEALSSQELCGTEAAMVPEYGRKDTIIKSLLVEPEGLE 359
GR+T W + PK L KVN TV AE+ S C E + KDT++KS LVEPEG+E
Sbjct: 841 GRKTNIWTIIPKKLGKVNITVVAESKQSSA-CPNEGMEQQKLNWKDTVVKSFLVEPEGIE 899
Query: 360 KEVTFNSLLCPSDAGASEQLSLKLPPNVVEDSARAFFSVLGDLLGSAMRNTQNLLQMPYG 539
KE T + L+C A AS+Q L LP +VVE SAR FF+V+GD+LG AM+N +LQMPYG
Sbjct: 900 KERTQSFLICTEGAKASKQGVLDLPNDVVEGSARGFFTVVGDILGLAMQNLV-VLQMPYG 958
Query: 540 CGEQNMVLFAPNIYVLDYLNETQQLTAEIKSKAIRYLNTGYQRQLLYKHYDGSYSTFGEH 719
GEQN L A + YVLDYL T+QLT E++SKA L+ GYQRQL +K+ DGSYS F +
Sbjct: 959 GGEQNAALLASDTYVLDYLKSTEQLTEEVQSKAFFLLSNGYQRQLSFKNSDGSYSVFWQQ 1018
Query: 720 YGRSEGNTWLTAFVMKTFAQARTYIFIDETHITEALTWLSQKQKDNGCFRSSGSLLNNAI 899
+G+ WL+A KT + + ++FIDE + L WLS +QK +GCF++ G L N+A
Sbjct: 1019 --NQKGSIWLSALTFKTLERMKKFVFIDENVQKQTLIWLSSQQKTSGCFKNDGQLFNHAW 1076
Query: 900 KGGVDDEVTLSAYVXXXXXXXXXXXXXXXXXVPCSAWRQPGSQPRRDPKVACLHQS---- 1067
+GG +++++L+AYV + P + CL +
Sbjct: 1077 EGGDEEDISLTAYVVGMFFEAGLN----------------STFPALRNALFCLEAALDSG 1120
Query: 1068 -----TAGLRLWPGGLPGKE---EGVLQSLXAEAVKEGDFIHWTPTQKPEAPVQHFYXPR 1223
+ + L GKE E +LQ+L A K + I+W +KP+ + P
Sbjct: 1121 VTNGYNHAILAYAFALAGKEKQVESLLQTLDQSATKLNNVIYWERERKPKTEEFPSFIPW 1180
Query: 1224 XASAEVE 1244
SA+ E
Sbjct: 1181 APSAQTE 1187
>ref|XP_001715949.2| PREDICTED: LOW QUALITY PROTEIN: ovostatin homolog 2 [Homo sapiens].
Length = 1372
Score = 266 bits (679), Expect = 4e-71
Identities = 163/427 (38%), Positives = 234/427 (54%), Gaps = 13/427 (3%)
Frame = +3
Query: 3 FVELTMPYSVIRGEGFTLKATVFNYLPKCIRVSVHLMDSPAFLA-VPEEKEEKAHCICGN 179
F+E+ P+SV++ E F L VF+Y C+ +SV + +S + A + K + I
Sbjct: 751 FIEIASPFSVVQNEQFDLIVNVFSYRNTCVEISVQVEESQNYEANIHTLKINGSEVIQAG 810
Query: 180 GRQTVSWAVTPKSLEKVNFTVTAEALSSQELCGTEAAMVPEYGRKDTIIKSLLVEPEGLE 359
GR+T W + PK L KVN TV AE+ S C E + KDT+++S LVEPEG+E
Sbjct: 811 GRKTNVWTIIPKKLGKVNITVVAESKQSSA-CPNEGMEQQKLNWKDTVVQSFLVEPEGIE 869
Query: 360 KEVTFNSLLCPSDAGASEQLSLKLPPNVVEDSARAFFSVLGDLLGSAMRNTQNLLQMPYG 539
KE T + L+C A AS+Q L LP +VVE SAR FF+V+GD+LG A++N +LQMPYG
Sbjct: 870 KERTQSFLICTEGAKASKQGVLDLPNDVVEGSARGFFTVVGDILGLALQNLV-VLQMPYG 928
Query: 540 CGEQNMVLFAPNIYVLDYLNETQQLTAEIKSKAIRYLNTGYQRQLLYKHYDGSYSTFGEH 719
GEQN L A + YVLDYL T+QLT E++SKA L+ GYQRQL +K+ DGSYS F +
Sbjct: 929 SGEQNAALLASDTYVLDYLKSTEQLTEEVQSKAFFLLSNGYQRQLSFKNSDGSYSVFWQQ 988
Query: 720 YGRSEGNTWLTAFVMKTFAQARTYIFIDETHITEALTWLSQKQKDNGCFRSSGSLLNNAI 899
+G+ L+A KT + + Y+FIDE + L WLS +QK +GCF++ G L N+A
Sbjct: 989 --SQKGSIXLSALTFKTLERMKKYVFIDENVQKQTLIWLSSQQKTSGCFKNDGQLFNHAW 1046
Query: 900 KGGVDDEVTLSAYVXXXXXXXXXXXXXXXXXVPCSAWRQPGSQPRRDPKVACLHQS---- 1067
+GG +++++L+AYV + P + CL +
Sbjct: 1047 EGGDEEDISLTAYVVGMFFEAGLNF----------------TFPALRNALFCLEAALDSG 1090
Query: 1068 -----TAGLRLWPGGLPGKE---EGVLQSLXAEAVKEGDFIHWTPTQKPEAPVQHFYXPR 1223
+ + L GKE E +LQ+L A K + I+W +KP+ + P
Sbjct: 1091 VTNGYNHAILAYAFALAGKEKQVESLLQTLDQSAPKLNNVIYWERERKPKTEEFPSFIPW 1150
Query: 1224 XASAEVE 1244
SA+ E
Sbjct: 1151 APSAQTE 1157
>ref|NP_001153060.1| CD109 antigen isoform 3 precursor [Homo sapiens].
Length = 1368
Score = 215 bits (548), Expect = 6e-56
Identities = 123/322 (38%), Positives = 180/322 (55%), Gaps = 9/322 (2%)
Frame = +3
Query: 3 FVELTMPYSVIRGEGFTLKATVFNYLPKCIRVSVHLMDSPAF--LAVPEEKEEKAH---- 164
F+ L +PYSVIRGE F L+ T+FNYL V V + S F L E H
Sbjct: 672 FIFLNLPYSVIRGEEFALEITIFNYLKDATEVKVIIEKSDKFDILMTSNEINATGHQQTL 731
Query: 165 CICGNGRQTVSWAVTPKSLEKVNFTVTAEALSSQELCGTEAAMVPEYGRKDTIIKSLLVE 344
+ TV + + P L ++ TVTA + ++ D + + +LV+
Sbjct: 732 LVPSEDGATVLFPIRPTHLGEIPITVTALSPTAS----------------DAVTQMILVK 775
Query: 345 PEGLEKEVTFNSLLCPSD---AGASEQLSLKLPPNVVEDSARAFFSVLGDLLGSAMRNTQ 515
EG+EK + + LL +D + LS PPN V S R + +GD+LG ++
Sbjct: 776 AEGIEKSYSQSILLDLTDNRLQSTLKTLSFSFPPNTVTGSERVQITAIGDVLGPSINGLA 835
Query: 516 NLLQMPYGCGEQNMVLFAPNIYVLDYLNETQQLTAEIKSKAIRYLNTGYQRQLLYKHYDG 695
+L++MPYGCGEQNM+ FAPNIY+LDYL + +QLT +K KA+ ++ GYQR+LLY+ DG
Sbjct: 836 SLIRMPYGCGEQNMINFAPNIYILDYLTKKKQLTDNLKEKALSFMRQGYQRELLYQREDG 895
Query: 696 SYSTFGEHYGRSEGNTWLTAFVMKTFAQARTYIFIDETHITEALTWLSQKQKDNGCFRSS 875
S+S FG + G+TWL+AFV++ F +A YI ID+ + TWL QK NG F
Sbjct: 896 SFSAFGNY--DPSGSTWLSAFVLRCFLEADPYIDIDQNVLHRTYTWLKGHQKSNGEFWDP 953
Query: 876 GSLLNNAIKGGVDDEVTLSAYV 941
G ++++ ++GG VTL+AY+
Sbjct: 954 GRVIHSELQGGNKSPVTLTAYI 975
>ref|NP_001153059.1| CD109 antigen isoform 2 precursor [Homo sapiens].
Length = 1428
Score = 215 bits (548), Expect = 6e-56
Identities = 123/322 (38%), Positives = 180/322 (55%), Gaps = 9/322 (2%)
Frame = +3
Query: 3 FVELTMPYSVIRGEGFTLKATVFNYLPKCIRVSVHLMDSPAF--LAVPEEKEEKAH---- 164
F+ L +PYSVIRGE F L+ T+FNYL V V + S F L E H
Sbjct: 749 FIFLNLPYSVIRGEEFALEITIFNYLKDATEVKVIIEKSDKFDILMTSNEINATGHQQTL 808
Query: 165 CICGNGRQTVSWAVTPKSLEKVNFTVTAEALSSQELCGTEAAMVPEYGRKDTIIKSLLVE 344
+ TV + + P L ++ TVTA + ++ D + + +LV+
Sbjct: 809 LVPSEDGATVLFPIRPTHLGEIPITVTALSPTAS----------------DAVTQMILVK 852
Query: 345 PEGLEKEVTFNSLLCPSD---AGASEQLSLKLPPNVVEDSARAFFSVLGDLLGSAMRNTQ 515
EG+EK + + LL +D + LS PPN V S R + +GD+LG ++
Sbjct: 853 AEGIEKSYSQSILLDLTDNRLQSTLKTLSFSFPPNTVTGSERVQITAIGDVLGPSINGLA 912
Query: 516 NLLQMPYGCGEQNMVLFAPNIYVLDYLNETQQLTAEIKSKAIRYLNTGYQRQLLYKHYDG 695
+L++MPYGCGEQNM+ FAPNIY+LDYL + +QLT +K KA+ ++ GYQR+LLY+ DG
Sbjct: 913 SLIRMPYGCGEQNMINFAPNIYILDYLTKKKQLTDNLKEKALSFMRQGYQRELLYQREDG 972
Query: 696 SYSTFGEHYGRSEGNTWLTAFVMKTFAQARTYIFIDETHITEALTWLSQKQKDNGCFRSS 875
S+S FG + G+TWL+AFV++ F +A YI ID+ + TWL QK NG F
Sbjct: 973 SFSAFGNY--DPSGSTWLSAFVLRCFLEADPYIDIDQNVLHRTYTWLKGHQKSNGEFWDP 1030
Query: 876 GSLLNNAIKGGVDDEVTLSAYV 941
G ++++ ++GG VTL+AY+
Sbjct: 1031 GRVIHSELQGGNKSPVTLTAYI 1052
>ref|NP_598000.2| CD109 antigen isoform 1 precursor [Homo sapiens].
Length = 1445
Score = 215 bits (548), Expect = 6e-56
Identities = 123/322 (38%), Positives = 180/322 (55%), Gaps = 9/322 (2%)
Frame = +3
Query: 3 FVELTMPYSVIRGEGFTLKATVFNYLPKCIRVSVHLMDSPAF--LAVPEEKEEKAH---- 164
F+ L +PYSVIRGE F L+ T+FNYL V V + S F L E H
Sbjct: 749 FIFLNLPYSVIRGEEFALEITIFNYLKDATEVKVIIEKSDKFDILMTSNEINATGHQQTL 808
Query: 165 CICGNGRQTVSWAVTPKSLEKVNFTVTAEALSSQELCGTEAAMVPEYGRKDTIIKSLLVE 344
+ TV + + P L ++ TVTA + ++ D + + +LV+
Sbjct: 809 LVPSEDGATVLFPIRPTHLGEIPITVTALSPTAS----------------DAVTQMILVK 852
Query: 345 PEGLEKEVTFNSLLCPSD---AGASEQLSLKLPPNVVEDSARAFFSVLGDLLGSAMRNTQ 515
EG+EK + + LL +D + LS PPN V S R + +GD+LG ++
Sbjct: 853 AEGIEKSYSQSILLDLTDNRLQSTLKTLSFSFPPNTVTGSERVQITAIGDVLGPSINGLA 912
Query: 516 NLLQMPYGCGEQNMVLFAPNIYVLDYLNETQQLTAEIKSKAIRYLNTGYQRQLLYKHYDG 695
+L++MPYGCGEQNM+ FAPNIY+LDYL + +QLT +K KA+ ++ GYQR+LLY+ DG
Sbjct: 913 SLIRMPYGCGEQNMINFAPNIYILDYLTKKKQLTDNLKEKALSFMRQGYQRELLYQREDG 972
Query: 696 SYSTFGEHYGRSEGNTWLTAFVMKTFAQARTYIFIDETHITEALTWLSQKQKDNGCFRSS 875
S+S FG + G+TWL+AFV++ F +A YI ID+ + TWL QK NG F
Sbjct: 973 SFSAFGNY--DPSGSTWLSAFVLRCFLEADPYIDIDQNVLHRTYTWLKGHQKSNGEFWDP 1030
Query: 876 GSLLNNAIKGGVDDEVTLSAYV 941
G ++++ ++GG VTL+AY+
Sbjct: 1031 GRVIHSELQGGNKSPVTLTAYI 1052
>ref|NP_056507.2| C3 and PZP-like alpha-2-macroglobulin domain-containing protein 8
[Homo sapiens].
Length = 1932
Score = 185 bits (469), Expect = 9e-47
Identities = 110/304 (36%), Positives = 163/304 (53%), Gaps = 20/304 (6%)
Frame = +3
Query: 90 IRVSVHLMDSPAFLAVPEEKEEKAHCICGNGRQTVSWAVTPKSLEKVNFTVTAEALSSQE 269
+ V H A + P++ + G + T SW T K E V TA+ LS E
Sbjct: 1022 VAVRAHNDARVALSSGPQDTAGMIEIVLGGHQNTRSWISTSKMGEPVASAHTAKILSWDE 1081
Query: 270 LCG---------TEAAMVPEYGRKDTIIKSLLVEPEGLEKEVTFNS-----------LLC 389
+ PE + I+ L P ++ + F++
Sbjct: 1082 FRTFWISWRGGLIQVGHGPEPSNESVIVAWTLPRPPEVQF-IGFSTGWGSMGEFRIWRKM 1140
Query: 390 PSDAGASEQLSLKLPPNVVEDSARAFFSVLGDLLGSAMRNTQNLLQMPYGCGEQNMVLFA 569
D SE +L +P + S RA S++GD++G + + NLL++P+GCGEQNM+ FA
Sbjct: 1141 EVDESYSEAFTLGVPHGAIPGSERATASIIGDVMGPTLNHLNNLLRLPFGCGEQNMIHFA 1200
Query: 570 PNIYVLDYLNETQQLTAEIKSKAIRYLNTGYQRQLLYKHYDGSYSTFGEHYGRSEGNTWL 749
PN++VL YL +TQQL+ E++ + YL GYQRQL YK DGSYS FGE + G+ WL
Sbjct: 1201 PNVFVLKYLQKTQQLSPEVERETTDYLVQGYQRQLTYKRQDGSYSAFGER--DASGSMWL 1258
Query: 750 TAFVMKTFAQARTYIFIDETHITEALTWLSQKQKDNGCFRSSGSLLNNAIKGGVDDEVTL 929
TAFV+K+FAQAR++IF+D + A +W+ Q+Q+ +G F + G +LN I+GG+ V L
Sbjct: 1259 TAFVLKSFAQARSFIFVDPRELAAAKSWIIQQQQADGSFLAVGRVLNKDIQGGIHGTVPL 1318
Query: 930 SAYV 941
+AYV
Sbjct: 1319 TAYV 1322
>ref|NP_000055.2| complement C3 precursor [Homo sapiens].
Length = 1663
Score = 116 bits (291), Expect = 4e-26
Identities = 94/334 (28%), Positives = 156/334 (46%), Gaps = 21/334 (6%)
Frame = +3
Query: 3 FVELTMPYSVIRGEGFTLKATVFNYLPKC-IRVSVHLMDSPAFLAVPEEKEEKAHCICGN 179
F++L +PYSV+R E ++A ++NY ++V V L+ +PAF ++ K
Sbjct: 830 FIDLRLPYSVVRNEQVEIRAVLYNYRQNQELKVRVELLHNPAFCSLATTKRRH------- 882
Query: 180 GRQTVSWAVTPKSLEKVNFTVTAEALSSQELCGTEAAMVPEYGRKDTIIKSLLVEPEGLE 359
+QTV+ + PKS V + + QE+ A V + D + KSL V PEG+
Sbjct: 883 -QQTVT--IPPKSSLSVPYVIVPLKTGLQEV--EVKAAVYHHFISDGVRKSLKVVPEGIR 937
Query: 360 KEVTFN-SLLCPSDAGASEQLSLKLPPNVVEDSARAFFSVLGDLLGSA-----------M 503
T L P G +PP + D S LL
Sbjct: 938 MNKTVAVRTLDPERLGREGVQKEDIPPADLSDQVPDTESETRILLQGTPVAQMTEDAVDA 997
Query: 504 RNTQNLLQMPYGCGEQNMVLFAPNIYVLDYLNETQQ---LTAEIKSKAIRYLNTGYQRQL 674
++L+ P GCGEQNM+ P + + YL+ET+Q E + A+ + GY +QL
Sbjct: 998 ERLKHLIVTPSGCGEQNMIGMTPTVIAVHYLDETEQWEKFGLEKRQGALELIKKGYTQQL 1057
Query: 675 LYKHYDGSYSTFGEHYGRSEGNTWLTAFVMKTFAQARTYIFIDETHITEALTWL-SQKQK 851
++ +++ F + +TWLTA+V+K F+ A I ID + A+ WL +KQK
Sbjct: 1058 AFRQPSSAFAAF----VKRAPSTWLTAYVVKVFSLAVNLIAIDSQVLCGAVKWLILEKQK 1113
Query: 852 DNGCFRSSGSLLNNAIKGGV----DDEVTLSAYV 941
+G F+ +++ + GG+ + ++ L+A+V
Sbjct: 1114 PDGVFQEDAPVIHQEMIGGLRNNNEKDMALTAFV 1147
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 52,449,138
Number of extensions: 1458191
Number of successful extensions: 4724
Number of sequences better than 1.0e-05: 17
Number of HSP's gapped: 4678
Number of HSP's successfully gapped: 23
Length of query: 416
Length of database: 18,297,164
Length adjustment: 105
Effective length of query: 311
Effective length of database: 14,835,944
Effective search space: 4613978584
Effective search space used: 4613978584
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007229
(1248 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_783327.2| alpha-2-macroglobulin-P precursor [Mus musculus]. 530 e-151
Alignment gi|NP_032671.2| murinoglobulin-1 precursor [Mus musculus]. 478 e-135
Alignment gi|NP_031402.3| alpha-2-macroglobulin precursor [Mus musculus]. 469 e-132
Alignment gi|XP_001480324.2| PREDICTED: murinoglobulin-1-like [Mus muscul... 467 e-131
Alignment gi|XP_922625.4| PREDICTED: murinoglobulin-1-like [Mus musculus]. 467 e-131
Alignment gi|NP_032672.2| murinoglobulin-2 precursor [Mus musculus]. 437 e-123
Alignment gi|NP_001001179.2| ovostatin homolog precursor [Mus musculus]. 283 2e-76
Alignment gi|NP_694738.1| CD109 antigen precursor [Mus musculus]. 217 2e-56
Alignment gi|XP_003086840.1| PREDICTED: complement C3-like, partial [Mus ... 120 2e-27
Alignment gi|NP_033908.2| complement C3 [Mus musculus]. 120 2e-27
>ref|NP_783327.2| alpha-2-macroglobulin-P precursor [Mus musculus].
Length = 1474
Score = 530 bits (1365), Expect = e-151
Identities = 277/418 (66%), Positives = 315/418 (75%), Gaps = 3/418 (0%)
Frame = +3
Query: 3 FVELTMPYSVIRGEGFTLKATVFNYLPKCIRVSVHLMDSPAFLAVPEEKEEKAHCICGNG 182
FV+LTMPYSVIRGE FTLKATV NYL CIRV V L SP FLA PEEKE+K+HCIC N
Sbjct: 793 FVDLTMPYSVIRGEAFTLKATVLNYLQTCIRVGVQLEASPDFLATPEEKEQKSHCICMNE 852
Query: 183 RQTVSWAVTPKSLEKVNFTVTAEALSSQELCGTEAAMVPEYGRKDTIIKSLLVEPEGLEK 362
R T+SWAV PKSL VNFTV+AEAL S+ELC E +VPE G+KDTIIKSLLVEPEGLE
Sbjct: 853 RHTMSWAVIPKSLGNVNFTVSAEALDSKELCRNEVPVVPERGKKDTIIKSLLVEPEGLEN 912
Query: 363 EVTFNSLLCPSDAGASEQLSLKLPPNVVEDSARAFFSVLGDLLGSAMRNTQNLLQMPYGC 542
EVTFNSLLCP+ A SEQ+SLKLP +VVE+SARA +VLGD+LGSAM+NTQ+LL+MPYGC
Sbjct: 913 EVTFNSLLCPTGAEVSEQISLKLPSDVVEESARASVTVLGDILGSAMQNTQDLLKMPYGC 972
Query: 543 GEQNMVLFAPNIYVLDYLNETQQLTAEIKSKAIRYLNTGYQRQLLYKHYDGSYSTFGEHY 722
GEQNMVLFAPNIYVLDYLNET+QLT EIK+KAI YLNTGYQRQL YKH DGSYSTFG+
Sbjct: 973 GEQNMVLFAPNIYVLDYLNETEQLTQEIKTKAITYLNTGYQRQLNYKHRDGSYSTFGDKP 1032
Query: 723 GRSEGNTWLTAFVMKTFAQARTYIFIDETHITEALTWLSQKQKDNGCFRSSGSLLNNAIK 902
GRS NTWLTAFV+K+FAQAR YIFIDE+HIT+ALTWLSQ+QKDNGCFRSSGSLLNNA+K
Sbjct: 1033 GRSHANTWLTAFVLKSFAQARRYIFIDESHITQALTWLSQQQKDNGCFRSSGSLLNNAMK 1092
Query: 903 GGVDDEVTLSAYVXXXXXXXXXXXXXXXXXVPCSAWRQPGSQPRRDPKVACLHQSTAGLR 1082
GGV+DEVTLSAY+ RR + H T L
Sbjct: 1093 GGVEDEVTLSAYITIALLEMSLPVTHPVVRNALFCLDTAWKSARRG--ASGNHVYTKALL 1150
Query: 1083 LWPGGLPGKEE---GVLQSLXAEAVKEGDFIHWTPTQKPEAPVQHFYXPRXASAEVEM 1247
+ L G ++ +L+SL EAVKE + +HWT QKP P +Y P+ SAEVEM
Sbjct: 1151 AYAFALAGNQDTKKEILKSLDEEAVKEDNSVHWTRAQKPRVPADLWYQPQAPSAEVEM 1208
>ref|NP_032671.2| murinoglobulin-1 precursor [Mus musculus].
Length = 1476
Score = 478 bits (1229), Expect = e-135
Identities = 248/432 (57%), Positives = 300/432 (69%), Gaps = 17/432 (3%)
Frame = +3
Query: 3 FVELTMPYSVIRGEGFTLKATVFNYLPKCIRVSVHLMDSPAFLAVPEEKEEKAHCICGNG 182
FVE+++PYSV+RGE F LKATV NYLP +++SV L SP F AVP ++ ++C+ NG
Sbjct: 795 FVEVSLPYSVVRGEAFMLKATVMNYLPTSMQMSVQLEASPDFTAVPVGDDQDSYCLSANG 854
Query: 183 RQTVSWAVTPKSLEKVNFTVTAEALSSQELCGTEAAMVPEYGRKDTIIKSLLVEPEGLEK 362
R T SW VTPKSL VNF+V+AEA S E CG+E A VPE GRKDT++K L+VEPEG+++
Sbjct: 855 RHTSSWLVTPKSLGNVNFSVSAEAQQSSEPCGSEVATVPETGRKDTVVKVLIVEPEGIKQ 914
Query: 363 EVTFNSLLCPSDAGASEQLSLKLPPNVVEDSARAFFSVLGDLLGSAMRNTQNLLQMPYGC 542
E TF+SL C SDA SE++SL LPP VV+DSARA FSV+GD+L SA+RNTQNLL MPYGC
Sbjct: 915 EHTFSSLFCASDAEISEKMSLVLPPTVVKDSARAHFSVMGDILSSAIRNTQNLLHMPYGC 974
Query: 543 GEQNMVLFAPNIYVLDYLNETQQLTAEIKSKAIRYLNTGYQRQLLYKHYDGSYSTFGEHY 722
GEQNMVLFAPNIYVL YLNETQQLT +IK+KA+ +L GYQR+L YKH DGSYS FG+
Sbjct: 975 GEQNMVLFAPNIYVLKYLNETQQLTQKIKTKALGFLRAGYQRELNYKHKDGSYSAFGDQN 1034
Query: 723 GRSEGNTWLTAFVMKTFAQARTYIFIDETHITEALTWLSQKQKDNGCFRSSGSLLNNAIK 902
G EGNTWLTAFV+K+FAQAR +IFIDE+HIT A TWLSQKQKDNGCFRSSGSL NNA+K
Sbjct: 1035 GEREGNTWLTAFVLKSFAQARAFIFIDESHITHAFTWLSQKQKDNGCFRSSGSLFNNAMK 1094
Query: 903 GGVDDEVTLSAYVXXXXXXXXXXXXXXXXXVPCSAWRQPGSQPRRDPKVACLHQS----- 1067
GGVDDE+TLSAY+ P + P ++CL S
Sbjct: 1095 GGVDDEMTLSAYITMALLESSL----------------PATHPVVSKALSCLESSWKTIE 1138
Query: 1068 ---------TAGLRLWPGGLPG---KEEGVLQSLXAEAVKEGDFIHWTPTQKPEAPVQHF 1211
T L + L G K + +L+SL EA+KE + IHW QK H
Sbjct: 1139 QERNASFVYTKALMAYAFALAGNQNKRDEILKSLDEEAIKENNSIHWKRPQKSRKSEHHL 1198
Query: 1212 YXPRXASAEVEM 1247
Y P+ +SAEVEM
Sbjct: 1199 YKPQASSAEVEM 1210
>ref|NP_031402.3| alpha-2-macroglobulin precursor [Mus musculus].
Length = 1495
Score = 469 bits (1208), Expect = e-132
Identities = 250/424 (58%), Positives = 292/424 (68%), Gaps = 9/424 (2%)
Frame = +3
Query: 3 FVELTMPYSVIRGEGFTLKATVFNYLPKCIRVSVHLMDSPAFLAVPEEKEEKAHCICGNG 182
F+ELT+PYSV+RGE FTLKATV NY+ CI++ V L SP FLAVP E +HCICGN
Sbjct: 805 FLELTLPYSVVRGEAFTLKATVLNYMSHCIQIRVDLEISPDFLAVPVGGHENSHCICGNE 864
Query: 183 RQTVSWAVTPKSLEKVNFTVTAEALSSQELCGTEAAMVPEYGRKDTIIKSLLVEPEGLEK 362
R+TVSWAVTPKSL +VNFT TAEAL S ELCG + VP KDT++KS++VEPEG+EK
Sbjct: 865 RKTVSWAVTPKSLGEVNFTATAEALQSPELCGNKLTEVPALVHKDTVVKSVIVEPEGIEK 924
Query: 363 EVTFNSLLCPSDAGASEQLSLKLPPNVVEDSARAFFSVLGDLLGSAMRNTQNLLQMPYGC 542
E T+N+LLCP D + SL+LPPNVVE SARA SVLGD+LGSAM+N QNLLQMPYGC
Sbjct: 925 EQTYNTLLCPQDTELQDNWSLELPPNVVEGSARATHSVLGDILGSAMQNLQNLLQMPYGC 984
Query: 543 GEQNMVLFAPNIYVLDYLNETQQLTAEIKSKAIRYLNTGYQRQLLYKHYDGSYSTFGEH- 719
GEQNMVLF PNIYVL+YLNETQQLT IKSKAI YL +GYQRQL Y+H DGSYSTFG H
Sbjct: 985 GEQNMVLFVPNIYVLNYLNETQQLTEAIKSKAINYLISGYQRQLNYQHSDGSYSTFGNHG 1044
Query: 720 YGRSEGNTWLTAFVMKTFAQARTYIFIDETHITEALTWLSQKQKDNGCFRSSGSLLNNAI 899
G + GNTWLTAFV+K FAQA+++IFI++THIT A WLS KQK+NGCF+ SG LLNNA+
Sbjct: 1045 GGNTPGNTWLTAFVLKAFAQAQSHIFIEKTHITNAFNWLSMKQKENGCFQQSGYLLNNAM 1104
Query: 900 KGGVDDEVTLSAYVXXXXXXXXXXXXXXXXXVPC----SAWRQPGSQPRRDPKVACLHQS 1067
KGGVDDEVTLSAY+ +AW H
Sbjct: 1105 KGGVDDEVTLSAYITIALLEMPLPVTHSAVRNALFCLETAWASISQSQES-------HVY 1157
Query: 1068 TAGLRLWPGGLPG---KEEGVLQSLXAEAVKEGDFIHW-TPTQKPEAPVQHFYXPRXASA 1235
T L + L G K +L+SL +AVKE D +HW P + FY PR SA
Sbjct: 1158 TKALLAYAFALAGNKAKRSELLESLNKDAVKEEDSLHWQRPGDVQKVKALSFYQPRAPSA 1217
Query: 1236 EVEM 1247
EVEM
Sbjct: 1218 EVEM 1221
>ref|XP_001480324.2| PREDICTED: murinoglobulin-1-like [Mus musculus].
Length = 1472
Score = 467 bits (1201), Expect = e-131
Identities = 245/432 (56%), Positives = 296/432 (68%), Gaps = 17/432 (3%)
Frame = +3
Query: 3 FVELTMPYSVIRGEGFTLKATVFNYLPKCIRVSVHLMDSPAFLAVPEEKEEKAHCICGNG 182
FVE++ PYSV+RGE F LKATV NYLP +++SV L DSP F AVP + ++C+
Sbjct: 795 FVEVSFPYSVVRGEAFMLKATVMNYLPTSMQMSVQLQDSPDFTAVPVGDYQDSYCLSAKE 854
Query: 183 RQTVSWAVTPKSLEKVNFTVTAEALSSQELCGTEAAMVPEYGRKDTIIKSLLVEPEGLEK 362
R T SW VTPKSL VNF+V+AEA S E CG+E A VPE GRKDT++K L+VEPEG++
Sbjct: 855 RYTSSWLVTPKSLGNVNFSVSAEAQQSPEPCGSEVATVPETGRKDTVVKFLIVEPEGIKI 914
Query: 363 EVTFNSLLCPSDAGASEQLSLKLPPNVVEDSARAFFSVLGDLLGSAMRNTQNLLQMPYGC 542
E TF+SLLC SDA SE+LSL LPP VV+DSARA FSV+GD+L A++NTQNLL MPYGC
Sbjct: 915 EHTFSSLLCASDAEISEKLSLVLPPTVVKDSARAHFSVMGDVLSPAIKNTQNLLHMPYGC 974
Query: 543 GEQNMVLFAPNIYVLDYLNETQQLTAEIKSKAIRYLNTGYQRQLLYKHYDGSYSTFGEHY 722
GEQNMVLFAPNIYVL YLNET QLT IK+KA+ +L GYQR+L YKH DGSYS FG+
Sbjct: 975 GEQNMVLFAPNIYVLKYLNETHQLTQTIKTKALGFLRAGYQRELNYKHKDGSYSAFGDQN 1034
Query: 723 GRSEGNTWLTAFVMKTFAQARTYIFIDETHITEALTWLSQKQKDNGCFRSSGSLLNNAIK 902
G EGNTWLTAFV+K+FAQAR +IFIDE+HIT +LTWLSQ+QKDNGCF+SSGSL NNA+K
Sbjct: 1035 GEREGNTWLTAFVLKSFAQARAFIFIDESHITHSLTWLSQQQKDNGCFQSSGSLFNNAMK 1094
Query: 903 GGVDDEVTLSAYVXXXXXXXXXXXXXXXXXVPCSAWRQPGSQPRRDPKVACLHQS----- 1067
GGVDDE+TLSAY+ P + P ++CL S
Sbjct: 1095 GGVDDEMTLSAYITMALLESSL----------------PATHPVVSKALSCLELSWKTIE 1138
Query: 1068 ---------TAGLRLWPGGLPG---KEEGVLQSLXAEAVKEGDFIHWTPTQKPEAPVQHF 1211
T L + L G K + +L+SL EA+KE + IHW QKP H
Sbjct: 1139 QERNASFVYTKALMAYAFALVGNQDKRDEILKSLDEEAIKENNSIHWKRPQKPRKSEHHL 1198
Query: 1212 YXPRXASAEVEM 1247
Y P+ +SAEVEM
Sbjct: 1199 YKPQASSAEVEM 1210
>ref|XP_922625.4| PREDICTED: murinoglobulin-1-like [Mus musculus].
Length = 1472
Score = 467 bits (1201), Expect = e-131
Identities = 245/432 (56%), Positives = 296/432 (68%), Gaps = 17/432 (3%)
Frame = +3
Query: 3 FVELTMPYSVIRGEGFTLKATVFNYLPKCIRVSVHLMDSPAFLAVPEEKEEKAHCICGNG 182
FVE++ PYSV+RGE F LKATV NYLP +++SV L DSP F AVP + ++C+
Sbjct: 795 FVEVSFPYSVVRGEAFMLKATVMNYLPTSMQMSVQLQDSPDFTAVPVGDYQDSYCLSAKE 854
Query: 183 RQTVSWAVTPKSLEKVNFTVTAEALSSQELCGTEAAMVPEYGRKDTIIKSLLVEPEGLEK 362
R T SW VTPKSL VNF+V+AEA S E CG+E A VPE GRKDT++K L+VEPEG++
Sbjct: 855 RYTSSWLVTPKSLGNVNFSVSAEAQQSPEPCGSEVATVPETGRKDTVVKFLIVEPEGIKI 914
Query: 363 EVTFNSLLCPSDAGASEQLSLKLPPNVVEDSARAFFSVLGDLLGSAMRNTQNLLQMPYGC 542
E TF+SLLC SDA SE+LSL LPP VV+DSARA FSV+GD+L A++NTQNLL MPYGC
Sbjct: 915 EHTFSSLLCASDAEISEKLSLVLPPTVVKDSARAHFSVMGDVLSPAIKNTQNLLHMPYGC 974
Query: 543 GEQNMVLFAPNIYVLDYLNETQQLTAEIKSKAIRYLNTGYQRQLLYKHYDGSYSTFGEHY 722
GEQNMVLFAPNIYVL YLNET QLT IK+KA+ +L GYQR+L YKH DGSYS FG+
Sbjct: 975 GEQNMVLFAPNIYVLKYLNETHQLTQTIKTKALGFLRAGYQRELNYKHKDGSYSAFGDQN 1034
Query: 723 GRSEGNTWLTAFVMKTFAQARTYIFIDETHITEALTWLSQKQKDNGCFRSSGSLLNNAIK 902
G EGNTWLTAFV+K+FAQAR +IFIDE+HIT +LTWLSQ+QKDNGCF+SSGSL NNA+K
Sbjct: 1035 GEREGNTWLTAFVLKSFAQARAFIFIDESHITHSLTWLSQQQKDNGCFQSSGSLFNNAMK 1094
Query: 903 GGVDDEVTLSAYVXXXXXXXXXXXXXXXXXVPCSAWRQPGSQPRRDPKVACLHQS----- 1067
GGVDDE+TLSAY+ P + P ++CL S
Sbjct: 1095 GGVDDEMTLSAYITMALLESSL----------------PATHPVVSKALSCLELSWKTIE 1138
Query: 1068 ---------TAGLRLWPGGLPG---KEEGVLQSLXAEAVKEGDFIHWTPTQKPEAPVQHF 1211
T L + L G K + +L+SL EA+KE + IHW QKP H
Sbjct: 1139 QERNASFVYTKALMAYAFALVGNQDKRDEILKSLDEEAIKENNSIHWKRPQKPRKSEHHL 1198
Query: 1212 YXPRXASAEVEM 1247
Y P+ +SAEVEM
Sbjct: 1199 YKPQASSAEVEM 1210
>ref|NP_032672.2| murinoglobulin-2 precursor [Mus musculus].
Length = 1451
Score = 437 bits (1125), Expect = e-123
Identities = 235/418 (56%), Positives = 286/418 (68%), Gaps = 3/418 (0%)
Frame = +3
Query: 3 FVELTMPYSVIRGEGFTLKATVFNYLPKCIRVSVHLMDSPAFLAVPEEKEEKAHCICGNG 182
FVE+++PYSV+RGE F LKATV NYLP +R+SV L SP F AVP + ++C+ NG
Sbjct: 795 FVEVSLPYSVVRGEAFMLKATVMNYLPTSMRMSVQLEASPDFTAVPVGDDHDSYCLSANG 854
Query: 183 RQTVSWAVTPKSLEKVNFTVTAEALSSQELCGTEAAMVPEYGRKDTIIKSLLVEPEGLEK 362
R T SW VTPKSL VNF+V+ EA S E CG+E A VPE GRKDT++K L+VEPEG+++
Sbjct: 855 RHTSSWLVTPKSLGNVNFSVSVEAQQSSEPCGSEVATVPETGRKDTVVKVLIVEPEGIKQ 914
Query: 363 EVTFNSLLCPSDAGASEQLSLKLPPNVVEDSARAFFSVLGDLLGSAMRNTQNLLQMPYGC 542
E TFNSL C SDA SE++SL LPP VV+DSARA FSV+GD+L SA++NTQNLL MPYGC
Sbjct: 915 EHTFNSLFCASDAEISEKMSLVLPPTVVKDSARAHFSVMGDILSSAIKNTQNLLHMPYGC 974
Query: 543 GEQNMVLFAPNIYVLDYLNETQQLTAEIKSKAIRYLNTGYQRQLLYKHYDGSYSTFGEHY 722
GEQNMVLFAPNIYVL YL++TQQLT +IK+KA+ +L GYQR+L YKH DGSYS FG+
Sbjct: 975 GEQNMVLFAPNIYVLKYLDKTQQLTQKIKTKALGFLRAGYQRELNYKHKDGSYSAFGDQN 1034
Query: 723 GRSEGNTWLTAFVMKTFAQARTYIFIDETHITEALTWLSQKQKDNGCFRSSGSLLNNAIK 902
G EGNTWLTAFV+K+FAQAR +IFIDE+HIT A TWLSQ+QKDNGCFRSSGSL +N IK
Sbjct: 1035 GEREGNTWLTAFVLKSFAQARAFIFIDESHITHAFTWLSQQQKDNGCFRSSGSLFHNDIK 1094
Query: 903 GGVDDEVTLSAYVXXXXXXXXXXXXXXXXXVPCSAWRQPGSQPRRDPKVACLHQSTAGLR 1082
V + LS S+W+ Q R V T L
Sbjct: 1095 HPVVSK-ALSCLE--------------------SSWKTI-EQGRNANFV-----YTKALM 1127
Query: 1083 LWPGGLPG---KEEGVLQSLXAEAVKEGDFIHWTPTQKPEAPVQHFYXPRXASAEVEM 1247
+ L G K +L+SL EA+KE + IHW QKP + Y P+ +S EVEM
Sbjct: 1128 AYAFALAGNQDKRNEILKSLDEEAIKEDNSIHWERPQKPRKSEHNLYKPQASSVEVEM 1185
>ref|NP_001001179.2| ovostatin homolog precursor [Mus musculus].
Length = 1456
Score = 283 bits (724), Expect = 2e-76
Identities = 165/429 (38%), Positives = 237/429 (55%), Gaps = 15/429 (3%)
Frame = +3
Query: 3 FVELTMPYSVIRGEGFTLKATVFNYLPKCIRVSVHLMDSPAFLA-VPEEKEEKAHCICGN 179
FVE+T P+SV+R E + TVFNYL C+ +SV L S + A + ++ + +
Sbjct: 791 FVEVTSPFSVVRSEQSDMVVTVFNYLTTCVEISVQLEASENYEASINTQRNTDSEVLQAG 850
Query: 180 GRQTVSWAVTPKSLEKVNFTVTAEALSSQELCGTEAAMVPEYGRKDTIIKSLLVEPEGLE 359
++T W + PK+L KVN TV A + S+ C +A+ + KDT++K++LVE EG+E
Sbjct: 851 EQKTYVWTIIPKTLGKVNVTVVATSKQSRA-CPNDASKEQDVHWKDTVVKTMLVEAEGIE 909
Query: 360 KEVTFNSLLCPSDAGASEQLSLKLPPNVVEDSARAFFSVLGDLLGSAMRNTQNLLQMPYG 539
KE T + L+CP AS+Q L+LP NVVE S R+F +++GD+LG AM+N ++LLQMPYG
Sbjct: 910 KEATQSFLICPKGTKASKQTLLELPSNVVEGSVRSFVTIVGDILGVAMQNLESLLQMPYG 969
Query: 540 CGEQNMVLFAPNIYVLDYLNETQQLTAEIKSKAIRYLNTGYQRQLLYKHYDGSYSTFGEH 719
CGEQN+ A ++Y+LDYL T QLT E+KSKA R L+ GYQ L +K+YDGSY F +
Sbjct: 970 CGEQNIAQLASDVYILDYLKATDQLTEELKSKAQRLLSNGYQNHLSFKNYDGSYDVFCQ- 1028
Query: 720 YGRSEGNTWLTAFVMKTFAQARTYIFIDETHITEALTWLSQKQKDNGCFRSSGSLLNNAI 899
EG+TWL+A KT + + YIFI+ET + L WL +KQK NGCFR ++ A
Sbjct: 1029 -SNQEGSTWLSALSFKTVEKMKEYIFIEETVPKQTLIWLVKKQKSNGCFRRDEKHVDTAQ 1087
Query: 900 KG--GVDDEVTLSAYVXXXXXXXXXXXXXXXXXVPCSAWRQPGSQPRRDPKVACLHQS-- 1067
+G G +++ L+AYV S P + CL ++
Sbjct: 1088 EGREGDQEDIALTAYVVGVFLEVGLN----------------ASFPALRNGLYCLEEAFS 1131
Query: 1068 -------TAGLRLWPGGLPGKEE---GVLQSLXAEAVKEGDFIHWTPTQKPEAPVQHFYX 1217
T + + L GKE+ +L L A K + I+W +KPE +
Sbjct: 1132 NGVTNGYTQAILAYVFALAGKEQQAKSLLSILDKSATKTNNMIYWERDEKPETDNSPSFI 1191
Query: 1218 PRXASAEVE 1244
P S E E
Sbjct: 1192 PSALSGETE 1200
>ref|NP_694738.1| CD109 antigen precursor [Mus musculus].
Length = 1442
Score = 217 bits (552), Expect = 2e-56
Identities = 120/322 (37%), Positives = 193/322 (59%), Gaps = 9/322 (2%)
Frame = +3
Query: 3 FVELTMPYSVIRGEGFTLKATVFNYLPKCIRVSVHLMDSPAFLAVPEEKE------EKAH 164
F+ L +PYSVIRGE F L+ ++ NYL I+V + + +S +F + + K
Sbjct: 751 FLFLNLPYSVIRGEEFALEVSIVNYLKDTIKVVILIEESDSFDILMTSNDTNGTIYRKTV 810
Query: 165 CICGNGRQTVSWAVTPKSLEKVNFTVTAEALSSQELCGTEAAMVPEYGRKDTIIKSLLVE 344
+ + T+ + + P L ++ TVTA + ++ D + ++++V+
Sbjct: 811 QVPRDNGVTLVFPIKPTHLGEIPITVTAASPTAS----------------DAVTQTIVVK 854
Query: 345 PEGLEKEVTFNSLLCPSDAGA-SEQLSLKL--PPNVVEDSARAFFSVLGDLLGSAMRNTQ 515
PEG+EK + + LL +D+ S+Q S++ PP+ V S R + +GD+LGS++
Sbjct: 855 PEGIEKSYSKSVLLDLTDSNVESKQQSMRFSFPPDTVIGSERVQITAIGDILGSSINGLS 914
Query: 516 NLLQMPYGCGEQNMVLFAPNIYVLDYLNETQQLTAEIKSKAIRYLNTGYQRQLLYKHYDG 695
+L++MPYGCGEQNM+ FAPNIY+LDYL + +QLT +K KA+ Y+ GYQR+LLY+ DG
Sbjct: 915 SLIRMPYGCGEQNMIYFAPNIYILDYLTKQKQLTVNLKEKALSYMRQGYQRELLYQREDG 974
Query: 696 SYSTFGEHYGRSEGNTWLTAFVMKTFAQARTYIFIDETHITEALTWLSQKQKDNGCFRSS 875
S+S FG+ S G+TWL+AFV++ F +A YI ID+ + TWL+ +K NG F
Sbjct: 975 SFSAFGDI--DSSGSTWLSAFVLRCFLEADYYIDIDQDVLHRTYTWLNAHKKFNGEFWEP 1032
Query: 876 GSLLNNAIKGGVDDEVTLSAYV 941
G ++++ ++GG VTL+AY+
Sbjct: 1033 GRVIHSELQGGTKSPVTLTAYI 1054
>ref|XP_003086840.1| PREDICTED: complement C3-like, partial [Mus musculus].
Length = 1524
Score = 120 bits (302), Expect = 2e-27
Identities = 96/335 (28%), Positives = 161/335 (48%), Gaps = 22/335 (6%)
Frame = +3
Query: 3 FVELTMPYSVIRGEGFTLKATVFNYLPKC-IRVSVHLMDSPAFLAVPEEKEEKAHCICGN 179
F++L +PYSV+R E ++A +FNY + ++V V L+ +PAF ++ K I
Sbjct: 739 FIDLRLPYSVVRNEQVEIRAVLFNYREQEELKVRVELLHNPAFCSMATAKNRYFQTI--- 795
Query: 180 GRQTVSWAVTPKSLEKVNFTVTAEALSSQELCGTEAAMVPEYGRKDTIIKSLLVEPEGLE 359
+ PKS V + + + QE+ A V + D + K+L V PEG+
Sbjct: 796 -------KIPPKSSVAVPYVIVPLKIGQQEV--EVKAAVFNHFISDGVKKTLKVVPEGMR 846
Query: 360 --KEVTFNSLLCPSDAGASEQLSLKLPPNVVEDSARAFFSVLGDLL-GSAM--------- 503
K V ++L P G + +P + D S +L GS +
Sbjct: 847 INKTVAIHTL-DPEKLGQGGVQKVDVPAADLSDQVPDTDSETRIILQGSPVVQMAEDAVD 905
Query: 504 -RNTQNLLQMPYGCGEQNMVLFAPNIYVLDYLNETQQ---LTAEIKSKAIRYLNTGYQRQ 671
++L+ P GCGEQNM+ P + + YL++T+Q E + +A+ + GY +Q
Sbjct: 906 GERLKHLIVTPAGCGEQNMIGMTPTVIAVHYLDQTEQWEKFGIEKRQEALELIKKGYTQQ 965
Query: 672 LLYKHYDGSYSTFGEHYGRSEGNTWLTAFVMKTFAQARTYIFIDETHITEALTWL-SQKQ 848
L +K +Y+ F +TWLTA+V+K F+ A I ID + A+ WL +KQ
Sbjct: 966 LAFKQPSSAYAAFNNR----PPSTWLTAYVVKVFSLAANLIAIDSHVLCGAVKWLILEKQ 1021
Query: 849 KDNGCFRSSGSLLNNAIKGGV----DDEVTLSAYV 941
K +G F+ G +++ + GG + +V+L+A+V
Sbjct: 1022 KPDGVFQEDGPVIHQEMIGGFRNAKEADVSLTAFV 1056
>ref|NP_033908.2| complement C3 [Mus musculus].
Length = 1663
Score = 120 bits (302), Expect = 2e-27
Identities = 96/335 (28%), Positives = 161/335 (48%), Gaps = 22/335 (6%)
Frame = +3
Query: 3 FVELTMPYSVIRGEGFTLKATVFNYLPKC-IRVSVHLMDSPAFLAVPEEKEEKAHCICGN 179
F++L +PYSV+R E ++A +FNY + ++V V L+ +PAF ++ K I
Sbjct: 830 FIDLRLPYSVVRNEQVEIRAVLFNYREQEELKVRVELLHNPAFCSMATAKNRYFQTI--- 886
Query: 180 GRQTVSWAVTPKSLEKVNFTVTAEALSSQELCGTEAAMVPEYGRKDTIIKSLLVEPEGLE 359
+ PKS V + + + QE+ A V + D + K+L V PEG+
Sbjct: 887 -------KIPPKSSVAVPYVIVPLKIGQQEV--EVKAAVFNHFISDGVKKTLKVVPEGMR 937
Query: 360 --KEVTFNSLLCPSDAGASEQLSLKLPPNVVEDSARAFFSVLGDLL-GSAM--------- 503
K V ++L P G + +P + D S +L GS +
Sbjct: 938 INKTVAIHTL-DPEKLGQGGVQKVDVPAADLSDQVPDTDSETRIILQGSPVVQMAEDAVD 996
Query: 504 -RNTQNLLQMPYGCGEQNMVLFAPNIYVLDYLNETQQ---LTAEIKSKAIRYLNTGYQRQ 671
++L+ P GCGEQNM+ P + + YL++T+Q E + +A+ + GY +Q
Sbjct: 997 GERLKHLIVTPAGCGEQNMIGMTPTVIAVHYLDQTEQWEKFGIEKRQEALELIKKGYTQQ 1056
Query: 672 LLYKHYDGSYSTFGEHYGRSEGNTWLTAFVMKTFAQARTYIFIDETHITEALTWL-SQKQ 848
L +K +Y+ F +TWLTA+V+K F+ A I ID + A+ WL +KQ
Sbjct: 1057 LAFKQPSSAYAAFNNR----PPSTWLTAYVVKVFSLAANLIAIDSHVLCGAVKWLILEKQ 1112
Query: 849 KDNGCFRSSGSLLNNAIKGGV----DDEVTLSAYV 941
K +G F+ G +++ + GG + +V+L+A+V
Sbjct: 1113 KPDGVFQEDGPVIHQEMIGGFRNAKEADVSLTAFV 1147
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 44,628,079
Number of extensions: 1231831
Number of successful extensions: 3841
Number of sequences better than 1.0e-05: 14
Number of HSP's gapped: 3806
Number of HSP's successfully gapped: 20
Length of query: 416
Length of database: 15,617,559
Length adjustment: 104
Effective length of query: 312
Effective length of database: 12,493,815
Effective search space: 3898070280
Effective search space used: 3898070280
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007229
(1248 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_001925235.3| PREDICTED: LOW QUALITY PROTEIN: alpha-2-macr... 687 0.0
Alignment gi|XP_001925210.2| PREDICTED: alpha-2-macroglobulin [Sus scrofa]. 483 e-137
Alignment gi|XP_001925373.3| PREDICTED: alpha-2-macroglobulin-like protei... 347 6e-96
Alignment gi|XP_003123534.2| PREDICTED: c3 and PZP-like alpha-2-macroglob... 188 5e-48
Alignment gi|NP_999174.1| complement C3 [Sus scrofa]. 116 2e-26
Alignment gi|NP_001116561.1| complement C4 [Sus scrofa]. 108 6e-24
Alignment gi|XP_003354119.1| PREDICTED: complement C3-like [Sus scrofa]. 86 3e-17
Alignment gi|NP_001001646.1| complement C5 [Sus scrofa]. 84 2e-16
Alignment gi|XP_001927580.2| PREDICTED: CD109 antigen isoform 1 [Sus scro... 83 3e-16
Alignment gi|XP_003355629.1| PREDICTED: ovostatin homolog 2-like, partial... 76 3e-14
>ref|XP_001925235.3| PREDICTED: LOW QUALITY PROTEIN: alpha-2-macroglobulin [Sus scrofa].
Length = 1476
Score = 687 bits (1774), Expect = 0.0
Identities = 360/424 (84%), Positives = 366/424 (86%), Gaps = 9/424 (2%)
Frame = +3
Query: 3 FVELTMPYSVIRGEGFTLKATVFNYLPKCIRVSVHLMDSPAFLAVPEEKEEKAHCICGNG 182
FVELTMPYSVIRGEGFTLKATVFNYLPKCIRVSVHLMDSPAFLAVPEEKEEKAHCICGNG
Sbjct: 796 FVELTMPYSVIRGEGFTLKATVFNYLPKCIRVSVHLMDSPAFLAVPEEKEEKAHCICGNG 855
Query: 183 RQTVSWAVTPKSLEKVNFTVTAEALSSQELCGTEAAMVPEYGRKDTIIKSLLVEPEGLEK 362
RQTVSWAVTPKSLEKVNFTVTAEALSSQELCGTEAAMVPEYGRKDTIIKSLLVEPEGLEK
Sbjct: 856 RQTVSWAVTPKSLEKVNFTVTAEALSSQELCGTEAAMVPEYGRKDTIIKSLLVEPEGLEK 915
Query: 363 EVTFNSLLCPSDAGASEQLSLKLPPNVVEDSARAFFSVLGDLLGSAMRNTQNLLQMPYGC 542
EVTFNSLLCPSDAGASEQLSLKLPPNVVEDSARAFFSVLGDLLGSAMRNTQNLLQMPYGC
Sbjct: 916 EVTFNSLLCPSDAGASEQLSLKLPPNVVEDSARAFFSVLGDLLGSAMRNTQNLLQMPYGC 975
Query: 543 GEQNMVLFAPNIYVLDYLNETQQLTAEIKSKAIRYLNTGYQRQLLYKHYDGSYSTFGEHY 722
GEQNMVLFAPNIYVLDYLNETQQLTAEIKSKAIRYLNTGYQRQLLYKHYDGSYSTFGEHY
Sbjct: 976 GEQNMVLFAPNIYVLDYLNETQQLTAEIKSKAIRYLNTGYQRQLLYKHYDGSYSTFGEHY 1035
Query: 723 GRSEGNTWLTAFVMKTFAQARTYIFIDETHITEALTWLSQKQKDNGCFRSSGSLLNNAIK 902
GRSEGNTWLTAFVMKTFAQARTYIFIDETHITEALTWLSQKQKDNGCFRSSGSLLNNAIK
Sbjct: 1036 GRSEGNTWLTAFVMKTFAQARTYIFIDETHITEALTWLSQKQKDNGCFRSSGSLLNNAIK 1095
Query: 903 GGVDDEVTLSAYVXXXXXXXXXXXXXXXXXVPC----SAWR--QPGSQPRRDPKVACLHQ 1064
GGVDDEVTLSAYV +AW+ Q GSQ H
Sbjct: 1096 GGVDDEVTLSAYVTIALLEIPLAVTHPVVRSALFCLETAWKSAQEGSQGS--------HV 1147
Query: 1065 STAGLRLWPGGLPG---KEEGVLQSLXAEAVKEGDFIHWTPTQKPEAPVQHFYXPRXASA 1235
T L + L G K++ VLQSL AEAVKEGD IHWT +KPEAPVQHFY PR SA
Sbjct: 1148 YTKALLAYAFALAGNQEKKKEVLQSLDAEAVKEGDSIHWTRPRKPEAPVQHFYKPRAPSA 1207
Query: 1236 EVEM 1247
EVEM
Sbjct: 1208 EVEM 1211
>ref|XP_001925210.2| PREDICTED: alpha-2-macroglobulin [Sus scrofa].
Length = 1490
Score = 483 bits (1244), Expect = e-137
Identities = 250/431 (58%), Positives = 303/431 (70%), Gaps = 16/431 (3%)
Frame = +3
Query: 3 FVELTMPYSVIRGEGFTLKATVFNYLPKCIRVSVHLMDSPAFLAVPEEKEEKAHCICGNG 182
F+ELT+PYSV+RGE FTLKATVFNYL CIRVSV L SPAF A+P EK E +HC+CGN
Sbjct: 808 FLELTLPYSVVRGEAFTLKATVFNYLSHCIRVSVQLEASPAFQAIPAEKSENSHCVCGNR 867
Query: 183 RQTVSWAVTPKSLEKVNFTVTAEALSSQELCGTEAAMVPEYGRKDTIIKSLLVEPEGLEK 362
++TV WAVTPKSL KVNFT TAEAL SQELCG E VPE G+KDT++K L+VEPEG+EK
Sbjct: 868 QKTVYWAVTPKSLGKVNFTATAEALKSQELCGNEIPQVPELGQKDTVVKPLIVEPEGIEK 927
Query: 363 EVTFNSLLCPSDAGASEQLSLKLPPNVVEDSARAFFSVLGDLLGSAMRNTQNLLQMPYGC 542
E TFN+L+C S+ G + SLKLP +VVE SARA ++VLGD+L SAM+N QNL+QMPYGC
Sbjct: 928 EETFNTLVCASETGEPKYFSLKLPSDVVEGSARATYTVLGDILSSAMQNLQNLVQMPYGC 987
Query: 543 GEQNMVLFAPNIYVLDYLNETQQLTAEIKSKAIRYLNTGYQRQLLYKHYDGSYSTFGEHY 722
GEQNMV F PNIYVL+YL ETQQLT +IKSKAI YL +GYQRQL YKH DGSYSTFGE
Sbjct: 988 GEQNMVRFVPNIYVLNYLKETQQLTEKIKSKAISYLVSGYQRQLNYKHSDGSYSTFGERG 1047
Query: 723 GRSEGNTWLTAFVMKTFAQARTYIFIDETHITEALTWLSQKQKDNGCFRSSGSLLNNAIK 902
G S+GNTWLTAFV+K+F+QAR YIF++++HI ++ WLSQKQK+NGCF+ SGSL NNAIK
Sbjct: 1048 GGSQGNTWLTAFVLKSFSQARAYIFVEDSHIQDSRNWLSQKQKENGCFQRSGSLFNNAIK 1107
Query: 903 GGVDDEVTLSAYVXXXXXXXXXXXXXXXXXVPCSAWRQPGSQPRRDPKVACLHQSTAGLR 1082
GGVDDEVTLSAY+ + P + P + CL ++ +
Sbjct: 1108 GGVDDEVTLSAYI----------------TIALLEMPLPVTHPVVHNALLCLEKAWESIS 1151
Query: 1083 LWPGGL----------------PGKEEGVLQSLXAEAVKEGDFIHWTPTQKPEAPVQHFY 1214
PG L K + +L+SL EA+K D IHW +K + + Y
Sbjct: 1152 EAPGNLVYTKALLAYAFTLAGNQAKRKELLESLDKEAIKTEDSIHWQRPEKSQES-EFGY 1210
Query: 1215 XPRXASAEVEM 1247
PR S +VEM
Sbjct: 1211 QPRAPSVDVEM 1221
>ref|XP_001925373.3| PREDICTED: alpha-2-macroglobulin-like protein 1 [Sus scrofa].
Length = 1340
Score = 347 bits (891), Expect = 6e-96
Identities = 192/430 (44%), Positives = 264/430 (61%), Gaps = 15/430 (3%)
Frame = +3
Query: 3 FVELTMPYSVIRGEGFTLKATVFNYLPKCIRVSVHLMDSPAFLAVPEEKEEKAHCICGNG 182
FV+LT+PYSV+RGE F L AT+FNYL KCIRV +L S + + + C+C +
Sbjct: 795 FVDLTLPYSVVRGESFRLTATIFNYLKKCIRVQTNLATSDEYQVGSWPDSQASSCLCADE 854
Query: 183 RQTVSWAVTPKSLEKVNFTVTAEALSSQELCGTEAAMVPEYGRKDTIIKSLLVEPEGLEK 362
++ W +T L +NFT++ L S ELCG + VPE GR DT+IK +LV+PEG+
Sbjct: 855 AKSYHWNITAVKLGHINFTISTTILDSSELCGGQKGFVPEKGRSDTLIKPVLVKPEGVLV 914
Query: 363 EVTFNSLLCPSDAGASEQLSLKLPPNVVEDSARAFFSVLGDLLGSAMRNTQNLLQMPYGC 542
E T +SLLCP + ASE +SL++P +VV DSA+A+ +VLGD++G+A++N L+QMP GC
Sbjct: 915 EKTHSSLLCPKGSVASESVSLEVPVDVVPDSAKAYITVLGDIMGTALQNLDKLVQMPSGC 974
Query: 543 GEQNMVLFAPNIYVLDYLNETQQLTAEIKSKAIRYLNTGYQRQLLYKHYDGSYSTFGEHY 722
GEQNMVLFAP IYVL YL ++ LT EI+S+A+ YL GYQR+L+YKH DGSYS FGE
Sbjct: 975 GEQNMVLFAPIIYVLQYLEKSGLLTEEIRSRAVGYLKLGYQRELMYKHSDGSYSAFGERD 1034
Query: 723 GRSEGNTWLTAFVMKTFAQARTYIFIDETHITEALTWLSQKQKDNGCFRSSGSLLNNAIK 902
G GNTWLTAFV K F QA+ +IFID+ +I +AL W++ Q +GC+ + G LL+ A+K
Sbjct: 1035 G--SGNTWLTAFVTKCFGQAQKFIFIDDKNIEDALKWMAGNQLSSGCYANVGKLLHTAMK 1092
Query: 903 GGVDDEVTLSAYVXXXXXXXXXXXXXXXXXVPCSAWRQPGSQPRRDPKVA----CLHQS- 1067
GGVDDEV+L+AY+ +A + G + R DP V+ CL S
Sbjct: 1093 GGVDDEVSLTAYI-------------------TAALLEMG-KTRDDPMVSQGLQCLKNSA 1132
Query: 1068 -------TAGLRLWPGGLPGK---EEGVLQSLXAEAVKEGDFIHWTPTQKPEAPVQHFYX 1217
T L + L G+ +L+ L +A+ G+ IHW +QKP
Sbjct: 1133 SSTTSLYTQALLAYTFSLAGEMDLRNMLLEKLDQQAIISGESIHW--SQKPTRSSNASPW 1190
Query: 1218 PRXASAEVEM 1247
+ EVE+
Sbjct: 1191 SEPEAVEVEL 1200
>ref|XP_003123534.2| PREDICTED: c3 and PZP-like alpha-2-macroglobulin domain-containing
protein 8 [Sus scrofa].
Length = 1907
Score = 188 bits (478), Expect = 5e-48
Identities = 128/397 (32%), Positives = 191/397 (48%), Gaps = 27/397 (6%)
Frame = +3
Query: 138 PEEKEEKAHCICGNGRQTVSWAVTPKSLEKVNFTVTAEALSSQEL----CGTEAAMV--- 296
P + + G + T SW T K E V T TA+ LS E + ++
Sbjct: 1036 PHDTAGMIEIVLGGHQNTRSWISTSKMGEPVASTPTAKILSWDEFRTFWISWHSGLIQVG 1095
Query: 297 --PEYGRKDTIIKSLLVEPEGLEKEVTFNS-----------LLCPSDAGASEQLSLKLPP 437
PE + I+ + P ++ + F++ D SE +L +P
Sbjct: 1096 HGPEPSNESVIMAWTIPRPPEVQF-IGFSTGWGSMGEFRIWRKMEMDESYSEAFTLGVPH 1154
Query: 438 NVVEDSARAFFSVLGDLLGSAMRNTQNLLQMPYGCGEQNMVLFAPNIYVLDYLNETQQLT 617
+ + S RA S++GD++G + NLL++P+GCGEQNM+ FAPN++VL YL +T+QL+
Sbjct: 1155 SAIPGSERAAASIIGDVMGPTLNRLSNLLRLPFGCGEQNMIHFAPNVFVLKYLQKTRQLS 1214
Query: 618 AEIKSKAIRYLNTGYQRQLLYKHYDGSYSTFGEHYGRSEGNTWLTAFVMKTFAQARTYIF 797
E++ + YL GYQRQL YKH DGSYS FGE + G+ WLTAFV+K+FAQAR+++F
Sbjct: 1215 PEVERETTDYLVQGYQRQLTYKHQDGSYSAFGER--DASGSMWLTAFVLKSFAQARSFVF 1272
Query: 798 IDETHITEALTWLSQKQKDNGCFRSSGSLLNNAIKGGVDDEVTLSAYVXXXXXXXXXXXX 977
ID + +A W+ Q+Q+ +G F + G +LN I+GG+ V L+AYV
Sbjct: 1273 IDPQELADAKGWIVQQQQADGSFPAVGRILNKDIQGGIHGTVPLTAYVVAALLEVGPASE 1332
Query: 978 XXXXXVPCSAWRQPGSQPRR-DPKVACLHQSTAGLRLWPGGLPGKEEGVLQSLXAEAVKE 1154
+ + S P DP + L T L P L+ L + A+ +
Sbjct: 1333 EERGAIAKARHFLESSAPLAVDPYSSALTAYTLTLLRSPAA-----PAALRKLRSLAITQ 1387
Query: 1155 GDFIHWTPTQKPEAPVQHF------YXPRXASAEVEM 1247
HW+ T + F SAEVEM
Sbjct: 1388 DGMTHWSLTGSRDVDKDAFLSFSDGVYQSVVSAEVEM 1424
Score = 52.4 bits (124), Expect = 5e-07
Identities = 38/144 (26%), Positives = 63/144 (43%), Gaps = 12/144 (8%)
Frame = +3
Query: 3 FVELTMPYSVIRGEGFTLKATVFNYLPKCIRVSV--HLMDSPAFLAVPEEKEEKAHCICG 176
FV+ T+P V+RGE + +++NY+ C V V + F+ P ++
Sbjct: 851 FVDFTLPSHVVRGEQAKIPLSIYNYMDTCAEVYVKFSVPKGIRFVGHPGKRHLTKKTCVA 910
Query: 177 NGRQTVSWAVTPKS-LEKVNFTVTAEALSSQELCGTEAAMVP---EYG------RKDTII 326
G +W V S L N T A A C ++ P Y +D I
Sbjct: 911 PGETEPTWVVLSFSDLGLSNITAKALAYRETSCCRDGKSIRPLEENYADRRVPIGRDHIR 970
Query: 327 KSLLVEPEGLEKEVTFNSLLCPSD 398
+S++VEPEG + T+++ CP++
Sbjct: 971 RSVMVEPEGAPRSYTYSAFFCPNE 994
>ref|NP_999174.1| complement C3 [Sus scrofa].
Length = 1661
Score = 116 bits (291), Expect = 2e-26
Identities = 97/334 (29%), Positives = 164/334 (49%), Gaps = 21/334 (6%)
Frame = +3
Query: 3 FVELTMPYSVIRGEGFTLKATVFNYLP-KCIRVSVHLMDSPAFLAVPEEKEEKAHCICGN 179
F++L +PYSV+R E ++A ++NY + ++V V L+ +PAF ++ K K H
Sbjct: 828 FIDLRLPYSVVRNEQVEIRAILYNYREAEDLKVRVELLYNPAFCSLATAK--KRH----- 880
Query: 180 GRQTVSWAVTPKSLEKVNFTVTAEALSSQELCGTEAAMVPEYGRKDTIIKSLLVEPEGLE 359
+QT++ V KS V + + QE+ A V + D + K+L V PEG+
Sbjct: 881 -QQTLT--VPAKSSVPVPYIIVPLKTGLQEV--EVKAAVYNHFISDGVKKTLKVVPEGMR 935
Query: 360 KEVTF-NSLLCPSDAGASEQLSLKLPPNVVEDSARAFFSVLGDLL-GSAMRNT------- 512
T L P G ++PP + D S LL G+ +
Sbjct: 936 VNKTVVTRTLDPEHKGQQGVQREEIPPADLSDQVPDTESETKILLQGTPVAQMVEDAIDG 995
Query: 513 ---QNLLQMPYGCGEQNMVLFAPNIYVLDYLNETQQ---LTAEIKSKAIRYLNTGYQRQL 674
++L+Q P GCGEQNM+ P + + YL+ T+Q E + +A+ + GY +QL
Sbjct: 996 DRLKHLIQTPSGCGEQNMIGMTPTVIAVHYLDSTEQWEKFGLEKRQEALELIKKGYTQQL 1055
Query: 675 LYKHYDGSYSTFGEHYGRSEGNTWLTAFVMKTFAQARTYIFIDETHITEALTWL-SQKQK 851
++ + +++ F + +T LTA+V+K FA A I ID + A+ WL +KQK
Sbjct: 1056 AFRQKNSAFAAFQDRL----SSTLLTAYVVKVFAMAANLIAIDSQVLCGAVKWLILEKQK 1111
Query: 852 DNGCFRSSGSLLNNAIKGGV----DDEVTLSAYV 941
+G F +G +++ + GG + +V+L+A+V
Sbjct: 1112 PDGVFEENGPVIHQEMIGGFKNTEEKDVSLTAFV 1145
>ref|NP_001116561.1| complement C4 [Sus scrofa].
Length = 1741
Score = 108 bits (270), Expect = 6e-24
Identities = 92/328 (28%), Positives = 150/328 (45%), Gaps = 16/328 (4%)
Frame = +3
Query: 6 VELTMPYSVIRGEGFTLKATVFNYLPKCIRVSVHLMDSPAFLAVPEEKEEKAHCICGNGR 185
+ L +P S+ R E L+ ++NYL K + VSVH+ SP + C+ G G
Sbjct: 833 LHLRLPVSIHRFEQLELRPVLYNYLDKDVPVSVHV--SPV----------EGLCLAGGGG 880
Query: 186 QTVSWAVTPKSLEKVNFTVTAEALSSQELCGTEAAMVPEYGRKDTIIKSLLVEPEGLEKE 365
V S V F+V + ++ L ++ D + K L + EG +
Sbjct: 881 LAQQVLVPAGSARPVGFSVVPISAAAVSLKVVARGSF-DFPVGDAVSKILQIANEGAIHQ 939
Query: 366 VTFNSLLCPSDA-GASEQLSLKLPPNVVEDSA-RAFFSVLG----DLLGS----AMRNTQ 515
L P + G + ++ PNV+ D R+F + D LGS +
Sbjct: 940 EELVYALNPQNVLGRNLEIPGHSDPNVIPDGDFRSFVRLTASDPLDTLGSEGALSPGGLA 999
Query: 516 NLLQMPYGCGEQNMVLFAPNIYVLDYLNETQQ---LTAEIKSKAIRYLNTGYQRQLLYKH 686
+LL++P GC EQ M AP + YL++T+Q L E K A+ + GY R ++
Sbjct: 1000 SLLRLPRGCAEQTMFYLAPTLAASRYLDKTEQWSTLPPETKDHAVDLIQKGYTRIQEFRK 1059
Query: 687 YDGSYSTFGEHYGRSEGNTWLTAFVMKTFAQARTYIFIDETHITEALTWLSQKQKDNGCF 866
DGSY + E +TWLTAFV+K + A+ + + E WL +QK++G F
Sbjct: 1060 NDGSYGAWLHR----ESSTWLTAFVLKVLSLAQEQVGGSPEKLQETAAWLLLQQKEDGSF 1115
Query: 867 RSSGSLLNNAIKGGV---DDEVTLSAYV 941
+++ ++GG+ D++V L+A+V
Sbjct: 1116 HDPCPVIHRDMQGGLVGNDEKVALTAFV 1143
>ref|XP_003354119.1| PREDICTED: complement C3-like [Sus scrofa].
Length = 1525
Score = 86.3 bits (212), Expect = 3e-17
Identities = 97/381 (25%), Positives = 159/381 (41%), Gaps = 68/381 (17%)
Frame = +3
Query: 3 FVELTMPYSVIRGEGFTLKATVFNYL--PKCIRVSVHLMDSPAFLAVPEEKEEKAHCICG 176
FV+L +P+SVIR E ++A ++N++ P +RV +S A P + +
Sbjct: 649 FVDLKLPFSVIRNEQVQIQAVLYNFMTNPVKVRVEFPYKESLCSAAKPGAPSRQVVTVPP 708
Query: 177 NGRQTVSWAVTPKSLEKVNFTVTAEALSSQELCGTEAAMVPEYGRKDTIIKSLLVEPEGL 356
+ V + + P + KV+ V A A +G +D + K+LLV+ G
Sbjct: 709 TSSKMVPFVLLPLEIGKVDVEVRAGA----------------FGIQDHVRKTLLVQAGGQ 752
Query: 357 EKEVTFNSLLCPSDAGASE----QLSLKLPPNVVEDSARAFFSVLGDLLGSAM------R 506
K+V+ + L P +E Q L PN A F SV GD+L + R
Sbjct: 753 IKQVSHSIFLNPQGQTQTELVPKQEILDKTPNT---EAEVFVSVQGDILAETILGSLTPR 809
Query: 507 NTQNLLQMPYGCGEQNMVLFAPNIYVLDYLNETQQ---LTAEIKSKAIRYL--------- 650
TQ LL++P GC EQ + P I + YL+ T Q + E + ++ +
Sbjct: 810 ETQRLLRVPTGCPEQTLSSLTPAIILTRYLDATGQWNKVGVEHREMVMKNIVSDDYLTPS 869
Query: 651 -----NTGYQRQ-----------------------LLYKHYDGSYSTFGEH------YGR 728
N QRQ +Y YS H Y
Sbjct: 870 PRVDPNRDPQRQQYPSSPVTHGHDFHLYLGPAGPSSVYLDPSRCYSRMLTHRSADGTYHT 929
Query: 729 SEGN---TWLTAFVMKTFAQA---RTYIFIDETHITEALTW-LSQKQKDNGCFRSSGSLL 887
S+GN TWLT++V + FA A ++ +D + W ++Q+Q+ +G F G ++
Sbjct: 930 SKGNPGSTWLTSYVFRVFALAYPIMSFSVLDLPSLCGLAKWIINQRQERDGSFSEEGPVV 989
Query: 888 NNAIKGGV---DDEVTLSAYV 941
+++GG + +V+L+A V
Sbjct: 990 MASMQGGYQGSEADVSLTALV 1010
>ref|NP_001001646.1| complement C5 [Sus scrofa].
Length = 1677
Score = 84.0 bits (206), Expect = 2e-16
Identities = 78/314 (24%), Positives = 135/314 (42%), Gaps = 23/314 (7%)
Frame = +3
Query: 3 FVELTMPYSVIRGEGFTLKATVFNY----LPKCIRV-SVHLMDSPAFLAVPEEKEEKAHC 167
F+E+++PYSV+RGE LK TV+NY + C+++ V + S + + ++ + C
Sbjct: 824 FLEMSIPYSVVRGEQIQLKGTVYNYGTSGVLFCVKMPPVEGICSSGSPGIDPQGKKSSRC 883
Query: 168 ----ICGNGRQTVSWAVTPKSLEKVNFTVTAEALSSQELCGTEAAMVPEYGRKDTIIKSL 335
I G+ V++ V P + N + E +E+ +VPE G K +
Sbjct: 884 QPQKIEGSSSHLVTFDVLPLEIGLHNINFSLETSLGREILVKTLRVVPE-GVKRESYAGI 942
Query: 336 LVEPEGLEKEVTFNSLLCPSDAGASEQLSLKLPPNVV-EDSARAFFSVLGDLLGSAM--- 503
++P G+ +T ++ ++P ++V + + SV G L+G M
Sbjct: 943 TLDPRGIYGAMT-----------RRKEFPYRVPLDLVPKTKVKRIVSVKGLLIGEVMSAV 991
Query: 504 ---RNTQNLLQMPYGCGEQNMVLFAPNIYVLDYL------NETQQLTAEIKSKAIRYLNT 656
L +P G E ++ P YV YL N + + + L
Sbjct: 992 LSQEGIDILTHLPKGNAEAELMSIVPVFYVFHYLEAGNNWNIFSSNSLAQRQNLQKKLRE 1051
Query: 657 GYQRQLLYKHYDGSYSTFGEHYGRSEGNTWLTAFVMKTFAQARTYIFIDETHITEALTWL 836
G + +++ D SYS + +TWLTAF ++ QA YI D I ++ WL
Sbjct: 1052 GVVSVMSFRNADHSYSM----WKSGSASTWLTAFALRVLGQASKYIDQDLNSICNSILWL 1107
Query: 837 SQK-QKDNGCFRSS 875
+K Q NG F+ +
Sbjct: 1108 VEKCQLGNGSFKEN 1121
>ref|XP_001927580.2| PREDICTED: CD109 antigen isoform 1 [Sus scrofa].
Length = 1144
Score = 83.2 bits (204), Expect = 3e-16
Identities = 40/94 (42%), Positives = 59/94 (62%)
Frame = +3
Query: 660 YQRQLLYKHYDGSYSTFGEHYGRSEGNTWLTAFVMKTFAQARTYIFIDETHITEALTWLS 839
YQR+LLY+ DGS+S FG G+TWL+AFV++ F +A YI ID+ + TWL
Sbjct: 656 YQRELLYQREDGSFSAFGND--DPSGSTWLSAFVLRCFLEADPYIDIDQNVLHRTYTWLK 713
Query: 840 QKQKDNGCFRSSGSLLNNAIKGGVDDEVTLSAYV 941
QK NG F G ++++ ++GG +TL+AY+
Sbjct: 714 GHQKSNGEFWEPGRVIHSELQGGNQSPITLTAYI 747
>ref|XP_003355629.1| PREDICTED: ovostatin homolog 2-like, partial [Sus scrofa].
Length = 427
Score = 76.3 bits (186), Expect = 3e-14
Identities = 54/181 (29%), Positives = 81/181 (44%), Gaps = 15/181 (8%)
Frame = +3
Query: 747 LTAFVMKTFAQARTYIFIDETHITEALTWLSQKQKDNGCFRSSGSLLNNAIKGGVDDEVT 926
L+A KT + Y+FIDE E L WLS KQK NGCF+S G + NNA + G +++
Sbjct: 9 LSALTFKTLEGMKKYVFIDEQVPKETLIWLSNKQKRNGCFQSDGKIFNNAWEVGDEEDTL 68
Query: 927 LSAYVXXXXXXXXXXXXXXXXXVPCSAWRQPG---SQPRRDPKVACLHQS---------T 1070
L+AY+ A+ + G + P + CL ++
Sbjct: 69 LTAYI-------------------VGAFLEAGLNFTFPALRDALFCLSEALENGVTNGYN 109
Query: 1071 AGLRLWPGGLPGKEE---GVLQSLXAEAVKEGDFIHWTPTQKPEAPVQHFYXPRXASAEV 1241
+ + L GKEE +LQ L A K+ + I+W +KP+ + P SAE+
Sbjct: 110 QAILAYAFALAGKEEQADSLLQILDQSATKKNNAIYWERAKKPKTDASPSFTPLTPSAEM 169
Query: 1242 E 1244
E
Sbjct: 170 E 170
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 32,876,980
Number of extensions: 912018
Number of successful extensions: 2901
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 2880
Number of HSP's successfully gapped: 13
Length of query: 416
Length of database: 11,343,932
Length adjustment: 101
Effective length of query: 315
Effective length of database: 8,829,335
Effective search space: 2781240525
Effective search space used: 2781240525
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007229
(1248 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr05 357 9e-96
>Sscrofa_Chr05
|| Length = 111506441
Score = 357 bits (180), Expect = 9e-96
Identities = 180/180 (100%)
Strand = Plus / Plus
Query: 480 ggagacttattaggctctgccatgagaaacacacaaaacctcctccaaatgccctacggc 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65305650 ggagacttattaggctctgccatgagaaacacacaaaacctcctccaaatgccctacggc 65305709
Query: 540 tgtggagaacagaatatggtcctctttgctcctaacatctatgttctggattacctgaat 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65305710 tgtggagaacagaatatggtcctctttgctcctaacatctatgttctggattacctgaat 65305769
Query: 600 gaaacacagcagctgactgcagagatcaagtccaaggccattcgctacctcaacaccggt 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65305770 gaaacacagcagctgactgcagagatcaagtccaaggccattcgctacctcaacaccggt 65305829
Score = 307 bits (155), Expect = 8e-81
Identities = 158/159 (99%)
Strand = Plus / Plus
Query: 745 ggctcacagcctttgtaatgaagacttttgcccaggctcgaacctacatcttcattgatg 804
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65307891 ggctcacagcctttgtaatgaagacttttgcccaggctcgaacctacatcttcattgatg 65307950
Query: 805 aaacgcatattaccgaagccctcacctggctctcccaaaagcagaaggacaatggctgtt 864
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65307951 aaacgcatattaccgaagccctcacctggctctcccaaaagcagaaggacaatggctgtt 65308010
Query: 865 tcaggagttctgggtcactgctcaacaatgccattaagg 903
||||||| |||||||||||||||||||||||||||||||
Sbjct: 65308011 tcaggagctctgggtcactgctcaacaatgccattaagg 65308049
Score = 289 bits (146), Expect = 2e-75
Identities = 177/185 (95%), Gaps = 2/185 (1%)
Strand = Plus / Plus
Query: 977 caccctgtcgtccgcagtgccctgttctgcctggagacagcctggaagtcagcccaggag 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65309711 caccctgtcgtccgcagtgccctgttctgcctggagacagcctggaagtcagcccaggag 65309770
Query: 1037 ggatcccaaggtag-catgtctacaccaaagcactgctggcctacgcctttggcctggcg 1095
||||||||||| || |||||||||||||| |||||||||||||||||||||| |||||||
Sbjct: 65309771 ggatcccaaggcagccatgtctacaccaaggcactgctggcctacgcctttgccctggcg 65309830
Query: 1096 ggttaccaggaaaagaag-aaggagtgctccagtcactanatgcggaagccgtgaaggaa 1154
||| |||||||||||||| ||| |||||||||||||||| ||||||||||||||||||||
Sbjct: 65309831 ggtaaccaggaaaagaagaaagaagtgctccagtcactagatgcggaagccgtgaaggaa 65309890
Query: 1155 ggtga 1159
|||||
Sbjct: 65309891 ggtga 65309895
Score = 254 bits (128), Expect = 1e-64
Identities = 128/128 (100%)
Strand = Plus / Plus
Query: 95 ggtcagtgtgcacctgatggactctcctgcattcctagctgtcccagaagagaaggaaga 154
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65301974 ggtcagtgtgcacctgatggactctcctgcattcctagctgtcccagaagagaaggaaga 65302033
Query: 155 aaaggcccactgcatctgtgggaatggccggcaaactgtgtcctgggcagtaaccccaaa 214
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65302034 aaaggcccactgcatctgtgggaatggccggcaaactgtgtcctgggcagtaaccccaaa 65302093
Query: 215 atcattag 222
||||||||
Sbjct: 65302094 atcattag 65302101
Score = 246 bits (124), Expect = 2e-62
Identities = 124/124 (100%)
Strand = Plus / Plus
Query: 221 agagaaggtgaatttcacagtgactgcagaggcactgtcgtctcaagagctgtgtgggac 280
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65302872 agagaaggtgaatttcacagtgactgcagaggcactgtcgtctcaagagctgtgtgggac 65302931
Query: 281 tgaggcggctatggtccccgaatatggaaggaaggacacaatcatcaagtccctgttggt 340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65302932 tgaggcggctatggtccccgaatatggaaggaaggacacaatcatcaagtccctgttggt 65302991
Query: 341 tgaa 344
||||
Sbjct: 65302992 tgaa 65302995
Score = 192 bits (97), Expect = 3e-46
Identities = 97/97 (100%)
Strand = Plus / Plus
Query: 1 tctttgtggagctcacaatgccctactcagtgatccgtggagagggcttcacgctcaagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65301150 tctttgtggagctcacaatgccctactcagtgatccgtggagagggcttcacgctcaagg 65301209
Query: 61 ccactgtgttcaactaccttcccaaatgcatccgggt 97
|||||||||||||||||||||||||||||||||||||
Sbjct: 65301210 ccactgtgttcaactaccttcccaaatgcatccgggt 65301246
Score = 178 bits (90), Expect = 5e-42
Identities = 90/90 (100%)
Strand = Plus / Plus
Query: 657 ggttaccagagacagcttctctacaagcactacgatggctcctatagcacctttggggag 716
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65306148 ggttaccagagacagcttctctacaagcactacgatggctcctatagcacctttggggag 65306207
Query: 717 cactatggcagaagtgagggcaatacctgg 746
||||||||||||||||||||||||||||||
Sbjct: 65306208 cactatggcagaagtgagggcaatacctgg 65306237
Score = 157 bits (79), Expect = 2e-35
Identities = 85/87 (97%)
Strand = Plus / Plus
Query: 395 agatgctggggcgtctgaacaattatctctgaagctacccccaaatgtggtagaagactc 454
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 65305286 agatgctggggcgtctgaacaattatctctgaagctgcccccaaatgtggtagaagactc 65305345
Query: 455 tgctcgtgccttcttctcagttttggg 481
|||||||||||||||||||||| ||||
Sbjct: 65305346 tgctcgtgccttcttctcagttctggg 65305372
Score = 129 bits (65), Expect = 4e-27
Identities = 75/77 (97%), Gaps = 1/77 (1%)
Strand = Plus / Plus
Query: 901 agggtggagtggacgatgaagtaaccctctctgcctatgtcaccattgcacttttggaga 960
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 65308609 agggtggagtggacgatgaagtaaccctctctgcctatgtcaccattgcacttctggaga 65308668
Query: 961 -tcctctcgctgtcact 976
||||||||||||||||
Sbjct: 65308669 ttcctctcgctgtcact 65308685
Score = 121 bits (61), Expect = 1e-24
Identities = 86/95 (90%)
Strand = Plus / Plus
Query: 1154 aggtgatttcatccactggacaccaactcagaaacccgaggcaccagtgcagcattttta 1213
|||||||| |||||||||||||| | ||| ||||||||||||||||||||||||||||||
Sbjct: 65312805 aggtgattccatccactggacacgacctcggaaacccgaggcaccagtgcagcattttta 65312864
Query: 1214 cnaaccccgggncgcctcagctgaagtggagatga 1248
| ||||||||| |||||||||| ||||||||||
Sbjct: 65312865 caaaccccgggcgccctcagctgaggtggagatga 65312899
Score = 103 bits (52), Expect = 2e-19
Identities = 52/52 (100%)
Strand = Plus / Plus
Query: 345 cctgaaggactagagaaggaagtaacattcaactccctgctttgtccatcag 396
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65303350 cctgaaggactagagaaggaagtaacattcaactccctgctttgtccatcag 65303401
Score = 79.8 bits (40), Expect = 3e-12
Identities = 106/128 (82%)
Strand = Plus / Plus
Query: 523 tccaaatgccctacggctgtggagaacagaatatggtcctctttgctcctaacatctatg 582
|||| |||||||| || |||||||| ||||||||||||| |||| ||||| |||||||
Sbjct: 65223320 tccagatgccctatggttgtggagagcagaatatggtccgttttgtccctaatatctatg 65223379
Query: 583 ttctggattacctgaatgaaacacagcagctgactgcagagatcaagtccaaggccattc 642
||||| | || ||||| || ||||| |||||||| | ||||||||||||| |||||
Sbjct: 65223380 ttctgaactatctgaaagagacacaacagctgacagagaagatcaagtccaaagccatca 65223439
Query: 643 gctacctc 650
||||||||
Sbjct: 65223440 gctacctc 65223447
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 36,940,599
Number of extensions: 338
Number of successful extensions: 338
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 336
Number of HSP's successfully gapped: 12
Length of query: 1248
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1227
Effective length of database: 2,808,413,156
Effective search space: 3445922942412
Effective search space used: 3445922942412
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)