Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007253
(1096 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001073262.1| aquaporin-3 [Bos taurus]. 587 e-168
Alignment gi|NP_001192762.1| aquaporin-9 [Bos taurus]. 288 6e-78
Alignment gi|XP_002690900.1| PREDICTED: aquaporin 9-like [Bos taurus]. 288 6e-78
Alignment gi|NP_001069846.1| aquaporin-7 [Bos taurus]. 259 2e-69
Alignment gi|NP_001178089.1| aquaporin-5 [Bos taurus]. 90 4e-18
Alignment gi|XP_002687326.1| PREDICTED: aquaporin 5-like [Bos taurus]. 90 4e-18
Alignment gi|NP_851346.1| aquaporin-4 [Bos taurus]. 86 6e-17
Alignment gi|NP_001094669.1| aquaporin-2 [Bos taurus]. 82 8e-16
Alignment gi|NP_777127.1| aquaporin-1 [Bos taurus]. 80 4e-15
Alignment gi|NP_776362.1| lens fiber major intrinsic protein [Bos taurus]. 77 2e-14
>ref|NP_001073262.1| aquaporin-3 [Bos taurus].
Length = 292
Score = 587 bits (1512), Expect = e-168
Identities = 287/292 (98%), Positives = 288/292 (98%)
Frame = +2
Query: 59 MGRQKELVTRCGEMLHIRYRLLRQALAECLGTLILVMFGCGSVAQVVLSRGTHGGFLTIN 238
MGRQKELV RCGEMLHIRYRLLRQALAECLGTLILVMFGCGSVAQVVLSRGTHGGFLTIN
Sbjct: 1 MGRQKELVNRCGEMLHIRYRLLRQALAECLGTLILVMFGCGSVAQVVLSRGTHGGFLTIN 60
Query: 239 LAFGFAVTLGILVAGQVSGAHLNPAVTFAMCFLAREPWIKLPVYTLAQTLGAFLGAGIIF 418
LAFGFAVTLGIL+AGQVSGAHLNPAVTFAMCFLAREPWIKLPVYTLAQTLGAFLGAGIIF
Sbjct: 61 LAFGFAVTLGILIAGQVSGAHLNPAVTFAMCFLAREPWIKLPVYTLAQTLGAFLGAGIIF 120
Query: 419 GLYYDAIWAFANNQLIVSGPNGTAGIFATYPSGHLDMVNGFFDQFIGTASLIVCVLAIVD 598
GLYYDAIWAFANNQLIVSGPNGTAGIFATYPSGHLDMVNGFFDQFIGTASLIVCVLAIVD
Sbjct: 121 GLYYDAIWAFANNQLIVSGPNGTAGIFATYPSGHLDMVNGFFDQFIGTASLIVCVLAIVD 180
Query: 599 PNNNPVPRGLEAFTVGLVVLVIGTSMGFNSGYAVNPARDFGPRLFTAIAGWGSEVFTTGR 778
P NNPVPRGLEAFTVGLVVLVIGTSMGFNSGYAVNPARDFGPRLFTAIAGWGSEVFTTGR
Sbjct: 181 PYNNPVPRGLEAFTVGLVVLVIGTSMGFNSGYAVNPARDFGPRLFTAIAGWGSEVFTTGR 240
Query: 779 HWWWVPIVSPLLGSIAGVFVYQLMIGCHLEPPPPSTDEENVKLSQVKHKE*M 934
HWWWVPIVSPLLGSIAGVFVYQLMIGCHLEPPPPSTDEENVKLS VKHKE M
Sbjct: 241 HWWWVPIVSPLLGSIAGVFVYQLMIGCHLEPPPPSTDEENVKLSHVKHKEQM 292
>ref|NP_001192762.1| aquaporin-9 [Bos taurus].
Length = 295
Score = 288 bits (737), Expect = 6e-78
Identities = 135/267 (50%), Positives = 180/267 (67%)
Frame = +2
Query: 95 EMLHIRYRLLRQALAECLGTLILVMFGCGSVAQVVLSRGTHGGFLTINLAFGFAVTLGIL 274
+ L ++ L ++ L+E LGT I+++ GCGSVAQ VLSRG GG +TIN F AV + I
Sbjct: 14 QRLVLKNTLAKETLSEFLGTFIMIVLGCGSVAQAVLSRGHFGGIITINTGFSMAVAMAIY 73
Query: 275 VAGQVSGAHLNPAVTFAMCFLAREPWIKLPVYTLAQTLGAFLGAGIIFGLYYDAIWAFAN 454
V+ VSG H+NPAV+FA+C R W K P Y AQ LGAF GA +FG+YYDA +FA
Sbjct: 74 VSAGVSGGHINPAVSFALCLFGRMKWFKFPFYVGAQFLGAFAGAATLFGIYYDAFMSFAG 133
Query: 455 NQLIVSGPNGTAGIFATYPSGHLDMVNGFFDQFIGTASLIVCVLAIVDPNNNPVPRGLEA 634
+L++ G N TA IFATYP+ +L +VN F +Q + T L++ + AI D N VPRGLE
Sbjct: 134 GKLLIVGENATAHIFATYPAPYLSLVNAFAEQVVATMFLLIVIFAIFDSRNLGVPRGLEP 193
Query: 635 FTVGLVVLVIGTSMGFNSGYAVNPARDFGPRLFTAIAGWGSEVFTTGRHWWWVPIVSPLL 814
+G +++ I +S+G NSG A+NPARD PRLFTA+AGWG EVFT G ++WW+P+V PL+
Sbjct: 194 VVIGFLIVTIASSLGMNSGCAMNPARDLSPRLFTALAGWGFEVFTVGNNFWWIPVVGPLV 253
Query: 815 GSIAGVFVYQLMIGCHLEPPPPSTDEE 895
G+ AG VY L+I H P P + E
Sbjct: 254 GAAAGGLVYFLLIEIHHPDPNPDLEAE 280
>ref|XP_002690900.1| PREDICTED: aquaporin 9-like [Bos taurus].
Length = 295
Score = 288 bits (737), Expect = 6e-78
Identities = 135/267 (50%), Positives = 180/267 (67%)
Frame = +2
Query: 95 EMLHIRYRLLRQALAECLGTLILVMFGCGSVAQVVLSRGTHGGFLTINLAFGFAVTLGIL 274
+ L ++ L ++ L+E LGT I+++ GCGSVAQ VLSRG GG +TIN F AV + I
Sbjct: 14 QRLVLKNTLAKETLSEFLGTFIMIVLGCGSVAQAVLSRGHFGGIITINTGFSMAVAMAIY 73
Query: 275 VAGQVSGAHLNPAVTFAMCFLAREPWIKLPVYTLAQTLGAFLGAGIIFGLYYDAIWAFAN 454
V+ VSG H+NPAV+FA+C R W K P Y AQ LGAF GA +FG+YYDA +FA
Sbjct: 74 VSAGVSGGHINPAVSFALCLFGRMKWFKFPFYVGAQFLGAFAGAATLFGIYYDAFMSFAG 133
Query: 455 NQLIVSGPNGTAGIFATYPSGHLDMVNGFFDQFIGTASLIVCVLAIVDPNNNPVPRGLEA 634
+L++ G N TA IFATYP+ +L +VN F +Q + T L++ + AI D N VPRGLE
Sbjct: 134 GKLLIVGENATAHIFATYPAPYLSLVNAFAEQVVATMFLLIVIFAIFDSRNLGVPRGLEP 193
Query: 635 FTVGLVVLVIGTSMGFNSGYAVNPARDFGPRLFTAIAGWGSEVFTTGRHWWWVPIVSPLL 814
+G +++ I +S+G NSG A+NPARD PRLFTA+AGWG EVFT G ++WW+P+V PL+
Sbjct: 194 VVIGFLIVTIASSLGMNSGCAMNPARDLSPRLFTALAGWGFEVFTVGNNFWWIPVVGPLV 253
Query: 815 GSIAGVFVYQLMIGCHLEPPPPSTDEE 895
G+ AG VY L+I H P P + E
Sbjct: 254 GAAAGGLVYFLLIEIHHPDPNPDLEAE 280
>ref|NP_001069846.1| aquaporin-7 [Bos taurus].
Length = 330
Score = 259 bits (663), Expect = 2e-69
Identities = 121/252 (48%), Positives = 169/252 (67%)
Frame = +2
Query: 122 LRQALAECLGTLILVMFGCGSVAQVVLSRGTHGGFLTINLAFGFAVTLGILVAGQVSGAH 301
+R+ LAE + T ++++FG G+VA +VL G G +L +NL FGF VT+G+ +AG +SGAH
Sbjct: 34 VREFLAEFISTYVMMVFGLGAVADMVLG-GKMGSYLAVNLGFGFGVTIGVHMAGNISGAH 92
Query: 302 LNPAVTFAMCFLAREPWIKLPVYTLAQTLGAFLGAGIIFGLYYDAIWAFANNQLIVSGPN 481
+N A+TF C L R W K PVY L Q LG+F+ A I+GL+Y+AI F+ +L+ +GP
Sbjct: 93 MNAALTFTSCALGRMSWKKFPVYVLGQFLGSFVAAATIYGLFYNAIIDFSGGKLMTTGPT 152
Query: 482 GTAGIFATYPSGHLDMVNGFFDQFIGTASLIVCVLAIVDPNNNPVPRGLEAFTVGLVVLV 661
TA IFATY H+ + GF D+ + T L +C+LAI D NNP G +A G++V++
Sbjct: 153 ATANIFATYLPDHMTLWRGFLDEVVVTGMLQLCLLAIADKGNNPTLLGTQAIVTGILVVI 212
Query: 662 IGTSMGFNSGYAVNPARDFGPRLFTAIAGWGSEVFTTGRHWWWVPIVSPLLGSIAGVFVY 841
IG S+G NSGYA+NP+RD PR FT +AGWGS+VF T + WWWVP+V+P LG+ G +Y
Sbjct: 213 IGISLGMNSGYAINPSRDLPPRFFTFLAGWGSQVFRT-KDWWWVPVVAPPLGAYCGAIIY 271
Query: 842 QLMIGCHLEPPP 877
IG + P
Sbjct: 272 LFFIGSNKRQEP 283
>ref|NP_001178089.1| aquaporin-5 [Bos taurus].
Length = 265
Score = 89.7 bits (221), Expect = 4e-18
Identities = 78/249 (31%), Positives = 114/249 (45%), Gaps = 2/249 (0%)
Frame = +2
Query: 122 LRQALAECLGTLILVMFGCGSVAQVVLSRGTHGGFLTINLAFGFAVTLGILVAGQVSGAH 301
L+ AE L TLI V FG GS + + + L I+LAFG A+ G VSG H
Sbjct: 11 LKAVFAEFLATLIFVFFGLGSALKWPSALPS---VLQISLAFGLAIGTMAQALGPVSGGH 67
Query: 302 LNPAVTFAMCFLAREPWIKLPVYTLAQTLGAFLGAGIIFGLY-YDAIWAFANNQLIVSGP 478
+NPA+T A+ + ++ Y +AQ +GA GA I++GL Y+A A N L
Sbjct: 68 MNPAITLALLVGNQISLLRAVFYVVAQLVGAIAGAAILYGLAPYNARGNLAVNAL---NN 124
Query: 479 NGTAGIFATYPSGHLDMVNGFFDQFIGTASLIVCVLAIVDPNNNPVPRGLEAFTVGLVVL 658
N TAG + I T L +CV + D + P G A ++GL V
Sbjct: 125 NTTAG-------------QAVVAEMILTFQLALCVFSSTD-SRRTSPVGSPALSIGLSV- 169
Query: 659 VIGTSMG-FNSGYAVNPARDFGPRLFTAIAGWGSEVFTTGRHWWWVPIVSPLLGSIAGVF 835
+G +G + +G ++NPAR FGP S + WV V P++G+
Sbjct: 170 TLGHLVGIYFTGCSMNPARSFGP----------SVIMNRFSSAHWVFWVGPIVGAAVAAI 219
Query: 836 VYQLMIGCH 862
+Y ++ H
Sbjct: 220 IYFYLLFPH 228
>ref|XP_002687326.1| PREDICTED: aquaporin 5-like [Bos taurus].
Length = 265
Score = 89.7 bits (221), Expect = 4e-18
Identities = 78/249 (31%), Positives = 114/249 (45%), Gaps = 2/249 (0%)
Frame = +2
Query: 122 LRQALAECLGTLILVMFGCGSVAQVVLSRGTHGGFLTINLAFGFAVTLGILVAGQVSGAH 301
L+ AE L TLI V FG GS + + + L I+LAFG A+ G VSG H
Sbjct: 11 LKAVFAEFLATLIFVFFGLGSALKWPSALPS---VLQISLAFGLAIGTMAQALGPVSGGH 67
Query: 302 LNPAVTFAMCFLAREPWIKLPVYTLAQTLGAFLGAGIIFGLY-YDAIWAFANNQLIVSGP 478
+NPA+T A+ + ++ Y +AQ +GA GA I++GL Y+A A N L
Sbjct: 68 MNPAITLALLVGNQISLLRAVFYVVAQLVGAIAGAAILYGLAPYNARGNLAVNAL---NN 124
Query: 479 NGTAGIFATYPSGHLDMVNGFFDQFIGTASLIVCVLAIVDPNNNPVPRGLEAFTVGLVVL 658
N TAG + I T L +CV + D + P G A ++GL V
Sbjct: 125 NTTAG-------------QAVVAEMILTFQLALCVFSSTD-SRRTSPVGSPALSIGLSV- 169
Query: 659 VIGTSMG-FNSGYAVNPARDFGPRLFTAIAGWGSEVFTTGRHWWWVPIVSPLLGSIAGVF 835
+G +G + +G ++NPAR FGP S + WV V P++G+
Sbjct: 170 TLGHLVGIYFTGCSMNPARSFGP----------SVIMNRFSSAHWVFWVGPIVGAAVAAI 219
Query: 836 VYQLMIGCH 862
+Y ++ H
Sbjct: 220 IYFYLLFPH 228
>ref|NP_851346.1| aquaporin-4 [Bos taurus].
Length = 323
Score = 85.9 bits (211), Expect = 6e-17
Identities = 69/238 (28%), Positives = 105/238 (44%), Gaps = 2/238 (0%)
Frame = +2
Query: 137 AECLGTLILVMFGCGSVAQVV-LSRGTHGGFLTINLAFGFAVTLGILVAGQVSGAHLNPA 313
AE L LI V+ GS + + I+L FG ++ + G +SG H+NPA
Sbjct: 40 AEFLAMLIFVLLSLGSTINWGGAEKPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPA 99
Query: 314 VTFAMCFLAREPWIKLPVYTLAQTLGAFLGAGIIFGLYYDAIWAFANNQLIVSGPNGTAG 493
VT AM R K Y AQ LGA +GAGI++ +V+ P+ G
Sbjct: 100 VTVAMVCTRRISIAKSVFYIAAQCLGAIIGAGILY---------------LVTPPSVVGG 144
Query: 494 IFATYPSGHLDMVNGFFDQFIGTASLIVCVLAIVDPNNNPVPRGLEAFTVGLVVLVIGTS 673
+ T G+L +G + I T L+ + A D V G A +G+ V IG
Sbjct: 145 LGVTTVHGNLSAGHGLLVELIITFQLVFTIFASCDSKRTDV-TGSIALAIGISV-AIGHL 202
Query: 674 MGFN-SGYAVNPARDFGPRLFTAIAGWGSEVFTTGRHWWWVPIVSPLLGSIAGVFVYQ 844
N +G ++NPAR FGP + + W + W+ V P++G++ +Y+
Sbjct: 203 FAINYTGASMNPARSFGPAVI--MGNWENH---------WIYWVGPIIGAVLAGGLYE 249
>ref|NP_001094669.1| aquaporin-2 [Bos taurus].
Length = 271
Score = 82.0 bits (201), Expect = 8e-16
Identities = 79/259 (30%), Positives = 111/259 (42%), Gaps = 3/259 (1%)
Frame = +2
Query: 125 RQALAECLGTLILVMFGCGSVAQVVLSRGTHGGFLTINLAFGFAVTLGILVAGQVSGAHL 304
R LAE L TL+ V FG GS + + L I +AFG A+ + G VSGAH+
Sbjct: 11 RAVLAEFLATLLFVFFGLGSALNWPQALPS---VLQIAMAFGLAIGTLVQALGHVSGAHI 67
Query: 305 NPAVTFAMCFLAREPWIKLPVYTLAQTLGAFLGAGIIFGLYYDAIWA-FANNQLIVSGPN 481
NPAVT A +++ Y AQ LGA GA ++ + AI A N L N
Sbjct: 68 NPAVTVACLVGCHVSFLRAVFYVAAQLLGAVAGAALLHEITPPAIRGDLAVNAL---NNN 124
Query: 482 GTAGIFATYPSGHLDMVNGFFDQFIGTASLIVCVLAIVDPNNNPVPRGLEAFTVGLVVLV 661
TAG T + T L++C+ A D G A ++G V
Sbjct: 125 STAGQAVTV-------------ELFLTLQLVLCIFASTDERRGD-NVGTPALSIGFSV-A 169
Query: 662 IGTSMGFN-SGYAVNPARDFGPRLFTAIAGWGSEVFTTGRHW-WWVPIVSPLLGSIAGVF 835
+G +G + +G ++NPAR P + T HW +W + PL+G+I
Sbjct: 170 LGHLLGIHYTGCSMNPARSLAPAIVTG---------KFDDHWVFW---IGPLVGAIVASL 217
Query: 836 VYQLMIGCHLEPPPPSTDE 892
+Y + L PP S E
Sbjct: 218 LYNYV----LFPPAKSLSE 232
>ref|NP_777127.1| aquaporin-1 [Bos taurus].
Length = 271
Score = 79.7 bits (195), Expect = 4e-15
Identities = 66/250 (26%), Positives = 108/250 (43%), Gaps = 7/250 (2%)
Frame = +2
Query: 125 RQALAECLGTLILVMFGCGSVAQV---VLSRGTHGGF---LTINLAFGFAVTLGILVAGQ 286
R +AE L ++ + GS + S T G + ++LAFG ++ G
Sbjct: 12 RAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSIATLAQSVGH 71
Query: 287 VSGAHLNPAVTFAMCFLAREPWIKLPVYTLAQTLGAFLGAGIIFGLYYDAIWAFANNQLI 466
+SGAHLNPAVT + + ++ +Y +AQ +GA + I+ G +
Sbjct: 72 ISGAHLNPAVTLGLLLSCQISVLRAIMYIIAQCVGAIVATAILSG-------------IT 118
Query: 467 VSGPNGTAGIFATYPSGHLDMVNGFFDQFIGTASLIVCVLAIVDPNNNPVPRGLEAFTVG 646
S P+ + G+ A P ++ G + IGT L++CVLA D + G +G
Sbjct: 119 SSLPDNSLGLNALAPG--VNSGQGLGIEIIGTLQLVLCVLATTDRRRRDL-GGSGPLAIG 175
Query: 647 LVVLVIGTSMGFN-SGYAVNPARDFGPRLFTAIAGWGSEVFTTGRHWWWVPIVSPLLGSI 823
V +G + + +G +NPAR F GS V T W+ V P +G+
Sbjct: 176 FSV-ALGHLLAIDYTGCGINPARSF-----------GSSVITHNFQDHWIFWVGPFIGAA 223
Query: 824 AGVFVYQLMI 853
V +Y ++
Sbjct: 224 LAVLIYDFIL 233
>ref|NP_776362.1| lens fiber major intrinsic protein [Bos taurus].
Length = 263
Score = 77.4 bits (189), Expect = 2e-14
Identities = 72/250 (28%), Positives = 107/250 (42%), Gaps = 7/250 (2%)
Frame = +2
Query: 125 RQALAECLGTLILVMFGCGSVAQVVLSRGTHGGF--LTINLAFGFAVTLGILVAGQVSGA 298
R AE +L V FG G+ R G L + LAFG A+ + G +SGA
Sbjct: 11 RAICAEFFASLFYVFFGLGASL-----RWAPGPLHVLQVALAFGLALATLVQAVGHISGA 65
Query: 299 HLNPAVTFAMCFLAREPWIKLPVYTLAQTLGAFLGAGIIFGLYYDAIWAFANNQLIVSGP 478
H+NPAVTFA ++ ++ Y +AQ LGA GA +++ + A+
Sbjct: 66 HVNPAVTFAFLVGSQMSLLRAICYMVAQLLGAVAGAAVLYSVTPPAV------------- 112
Query: 479 NGTAGIFATYPS---GHLDMVNGFFDQFIGTASLIVCVLAIVDPNNNPVPRGLEAFTVGL 649
G + +P G +V F T ++C+ A D N G A VG
Sbjct: 113 RGNLALNTLHPGVSVGQATIVEIFL-----TLQFVLCIFATYDERRNG-RLGSVALAVGF 166
Query: 650 VVLVIGTSMG-FNSGYAVNPARDFGPRLFTAIAGWGSEVFTTGRHW-WWVPIVSPLLGSI 823
L +G G + +G +NPAR F P + T FT HW +W V P++G+
Sbjct: 167 -SLTLGHLFGMYYTGAGMNPARSFAPAILT-------RNFT--NHWVYW---VGPVIGAG 213
Query: 824 AGVFVYQLMI 853
G +Y ++
Sbjct: 214 LGSLLYDFLL 223
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 47,201,402
Number of extensions: 1549638
Number of successful extensions: 6175
Number of sequences better than 1.0e-05: 13
Number of HSP's gapped: 6122
Number of HSP's successfully gapped: 13
Length of query: 365
Length of database: 17,681,374
Length adjustment: 104
Effective length of query: 261
Effective length of database: 14,240,222
Effective search space: 3716697942
Effective search space used: 3716697942
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007253
(1096 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_854596.1| PREDICTED: similar to Aquaporin 3 [Canis famili... 568 e-162
Alignment gi|XP_544701.1| PREDICTED: similar to aquaporin 9 [Canis famili... 290 2e-78
Alignment gi|XP_855114.1| PREDICTED: similar to aquaporin 10 [Canis famil... 282 5e-76
Alignment gi|XP_531973.2| PREDICTED: similar to Aquaporin-7 (AQP-7) (Aqua... 254 8e-68
Alignment gi|XP_855456.1| PREDICTED: similar to Aquaporin 4 (WCH4) (Mercu... 85 1e-16
Alignment gi|XP_850126.1| PREDICTED: similar to aquaporin 8 isoform 1 [Ca... 83 5e-16
Alignment gi|NP_001074369.1| lens fiber major intrinsic protein [Canis lu... 79 6e-15
Alignment gi|XP_543678.2| PREDICTED: similar to aquaporin 2 [Canis famili... 77 2e-14
Alignment gi|XP_855567.1| PREDICTED: aquaporin 1 [Canis familiaris]. 76 5e-14
Alignment gi|NP_001003130.1| aquaporin-1 [Canis lupus familiaris]. 76 5e-14
>ref|XP_854596.1| PREDICTED: similar to Aquaporin 3 [Canis familiaris].
Length = 292
Score = 568 bits (1465), Expect = e-162
Identities = 276/290 (95%), Positives = 283/290 (97%)
Frame = +2
Query: 59 MGRQKELVTRCGEMLHIRYRLLRQALAECLGTLILVMFGCGSVAQVVLSRGTHGGFLTIN 238
MGRQKELV+RCGEMLHIRYRLLRQALAECLGTLILVMFGCGSVAQVVLSRGTHGGFLTIN
Sbjct: 1 MGRQKELVSRCGEMLHIRYRLLRQALAECLGTLILVMFGCGSVAQVVLSRGTHGGFLTIN 60
Query: 239 LAFGFAVTLGILVAGQVSGAHLNPAVTFAMCFLAREPWIKLPVYTLAQTLGAFLGAGIIF 418
LAFGFAVTLGILVAGQVSGAHLNPAVTFAMCFLAREPWIKLPVY LAQTLGAFLGAGI+F
Sbjct: 61 LAFGFAVTLGILVAGQVSGAHLNPAVTFAMCFLAREPWIKLPVYALAQTLGAFLGAGIVF 120
Query: 419 GLYYDAIWAFANNQLIVSGPNGTAGIFATYPSGHLDMVNGFFDQFIGTASLIVCVLAIVD 598
GLYYDAIW FA N+L+VSGPNGTAGIFATYPSGHLDMVNGFFDQFIGTASLIVCVLAIVD
Sbjct: 121 GLYYDAIWDFAKNELVVSGPNGTAGIFATYPSGHLDMVNGFFDQFIGTASLIVCVLAIVD 180
Query: 599 PNNNPVPRGLEAFTVGLVVLVIGTSMGFNSGYAVNPARDFGPRLFTAIAGWGSEVFTTGR 778
P NNPVPRGLEAFTVGLVVLVIGTSMGFNSGYAVNPARDFGPRLFTAIAGWGSEVFTTGR
Sbjct: 181 PYNNPVPRGLEAFTVGLVVLVIGTSMGFNSGYAVNPARDFGPRLFTAIAGWGSEVFTTGR 240
Query: 779 HWWWVPIVSPLLGSIAGVFVYQLMIGCHLEPPPPSTDEENVKLSQVKHKE 928
HWWWVPIVSPLLGSIAGVFVYQLMIGCHLE PP ST++ENVKL+ VKHKE
Sbjct: 241 HWWWVPIVSPLLGSIAGVFVYQLMIGCHLEQPPSSTEQENVKLAHVKHKE 290
>ref|XP_544701.1| PREDICTED: similar to aquaporin 9 [Canis familiaris].
Length = 295
Score = 290 bits (742), Expect = 2e-78
Identities = 134/267 (50%), Positives = 181/267 (67%)
Frame = +2
Query: 95 EMLHIRYRLLRQALAECLGTLILVMFGCGSVAQVVLSRGTHGGFLTINLAFGFAVTLGIL 274
+ L ++ L ++ ++E LGT I+++ GCGSVAQ +LSRG GG +TIN+ F AV + I
Sbjct: 14 QRLVLKSSLAKETISEFLGTFIMIVLGCGSVAQAILSRGHFGGIITINVGFAMAVVMAIY 73
Query: 275 VAGQVSGAHLNPAVTFAMCFLAREPWIKLPVYTLAQTLGAFLGAGIIFGLYYDAIWAFAN 454
V G VSG H+NPAV+ AMC R W K P Y AQ LGAF GA +FG+YYD + +FA
Sbjct: 74 VTGGVSGGHINPAVSLAMCLFGRMKWFKFPFYVGAQFLGAFAGAATLFGIYYDGLMSFAG 133
Query: 455 NQLIVSGPNGTAGIFATYPSGHLDMVNGFFDQFIGTASLIVCVLAIVDPNNNPVPRGLEA 634
+L++ G N TA IFATYP+ +L + N F DQ + T L++ V AI D N VPRGLE
Sbjct: 134 GKLLIVGENATAHIFATYPAPYLSLTNAFADQVVATMFLLMIVFAIFDSRNLGVPRGLEP 193
Query: 635 FTVGLVVLVIGTSMGFNSGYAVNPARDFGPRLFTAIAGWGSEVFTTGRHWWWVPIVSPLL 814
+GL+++VI +S+G NSG A+NPARD PRLFTA+AGWG EVFT G ++WW+P+V PL+
Sbjct: 194 IAIGLLIIVISSSLGLNSGCAMNPARDLSPRLFTALAGWGFEVFTAGNNFWWIPVVGPLV 253
Query: 815 GSIAGVFVYQLMIGCHLEPPPPSTDEE 895
G++ G +Y L+I H P P + E
Sbjct: 254 GAVIGGLIYVLVIEIHHPNPDPDFETE 280
>ref|XP_855114.1| PREDICTED: similar to aquaporin 10 [Canis familiaris].
Length = 298
Score = 282 bits (721), Expect = 5e-76
Identities = 141/266 (53%), Positives = 174/266 (65%), Gaps = 1/266 (0%)
Frame = +2
Query: 101 LHIRYRLLRQALAECLGTLILVMFGCGSVAQVVLSRGTHGGFLTINLAFGFAVTLGILVA 280
L IR L+RQ LAE LG +L++ G+VAQ V S G F T+ LA AVT+ I V+
Sbjct: 14 LQIRSHLVRQCLAEFLGVFVLMILTQGAVAQAVTSGEGKGNFFTMFLAASLAVTIAIYVS 73
Query: 281 GQVSGAHLNPAVTFAMCFLAREPWIKLPVYTLAQTLGAFLGAGIIFGLYYDAIWAFANNQ 460
G VSGAHLNPA + AMC L R PW KLP+Y L Q L AF +G + LYYDA+ +
Sbjct: 74 GNVSGAHLNPAFSLAMCLLGRLPWAKLPIYCLVQLLSAFCASGATYALYYDALQNYTGGN 133
Query: 461 LIVSGPNGTAGIFATYPSGHLDMVNGFFDQFIGTASLIVCVLAIVDPNNNPVPRGLEAFT 640
L V GP TA IFATYP+ +L + NGF DQ +GT LIV +LAI+D N VP GLE
Sbjct: 134 LTVMGPKETASIFATYPAPYLSLNNGFLDQVLGTGILIVGILAILDTRNKGVPAGLEPVA 193
Query: 641 VGLVVLVIGTSMGFNSGYAVNPARDFGPRLFTAIAGWGSEVFTTGRHWWWVPIVSPLLGS 820
VGL++L IG SMG N G+ +NPARD GPRLFT +AGWG EVF+ G WWWVP+V+PL+G+
Sbjct: 194 VGLLILAIGLSMGANCGFPLNPARDLGPRLFTYVAGWGPEVFSAGNGWWWVPVVAPLVGA 253
Query: 821 IAGVFVYQLMIGC-HLEPPPPSTDEE 895
G YQL++ H E P+ D E
Sbjct: 254 TLGTATYQLLVALHHSEESEPAQDLE 279
>ref|XP_531973.2| PREDICTED: similar to Aquaporin-7 (AQP-7) (Aquaporin-7-like)
(Aquaporin adipose) (AQPap) [Canis familiaris].
Length = 341
Score = 254 bits (650), Expect = 8e-68
Identities = 125/261 (47%), Positives = 169/261 (64%)
Frame = +2
Query: 119 LLRQALAECLGTLILVMFGCGSVAQVVLSRGTHGGFLTINLAFGFAVTLGILVAGQVSGA 298
++R+ LAE + T ++++FG GSVA +VL G +L +NL FGF VT+G+ VAG +SGA
Sbjct: 33 MVREFLAEFMSTYVMMVFGLGSVAHMVLGN-RFGSYLGVNLGFGFGVTMGVHVAGNISGA 91
Query: 299 HLNPAVTFAMCFLAREPWIKLPVYTLAQTLGAFLGAGIIFGLYYDAIWAFANNQLIVSGP 478
H+N AVTF C L R W K PVY L Q LG+FL A I+ L+Y AI F+ L V+GP
Sbjct: 92 HMNAAVTFTNCALGRMSWKKFPVYILGQFLGSFLAAATIYLLFYSAIIEFSGGHLAVTGP 151
Query: 479 NGTAGIFATYPSGHLDMVNGFFDQFIGTASLIVCVLAIVDPNNNPVPRGLEAFTVGLVVL 658
TA IFATY L + GF D+ I T L +C+ AI D NNP +G +A +G++++
Sbjct: 152 TATANIFATYLPDRLTLWMGFLDEVIVTGILQLCLFAITDKENNPALQGTQALVIGVLII 211
Query: 659 VIGTSMGFNSGYAVNPARDFGPRLFTAIAGWGSEVFTTGRHWWWVPIVSPLLGSIAGVFV 838
VIG S+G N+GYA+NP+RD PR FT IAGWG +VF R WWWVP+V+PLLG+ G +
Sbjct: 212 VIGVSLGMNTGYAMNPSRDLPPRFFTYIAGWGIQVFRV-RDWWWVPVVAPLLGAYLGGII 270
Query: 839 YQLMIGCHLEPPPPSTDEENV 901
Y + IG + P + + V
Sbjct: 271 YLVFIGSSITQRPQTLENSMV 291
>ref|XP_855456.1| PREDICTED: similar to Aquaporin 4 (WCH4) (Mercurial-insensitive
water channel) (MIWC) [Canis familiaris].
Length = 398
Score = 84.7 bits (208), Expect = 1e-16
Identities = 70/241 (29%), Positives = 106/241 (43%), Gaps = 5/241 (2%)
Frame = +2
Query: 137 AECLGTLILVMFGCGSVAQVVLSRGTHG----GFLTINLAFGFAVTLGILVAGQVSGAHL 304
AE L LI V+ GS + GT + I+L FG ++ + G +SG H+
Sbjct: 115 AEFLAMLIFVLLSLGST---INWGGTEKPLPVDMVLISLCFGLSIATMVQCFGHISGGHI 171
Query: 305 NPAVTFAMCFLAREPWIKLPVYTLAQTLGAFLGAGIIFGLYYDAIWAFANNQLIVSGPNG 484
NPAVT AM + K Y AQ LGA +GAGI++ +V+ P+
Sbjct: 172 NPAVTVAMVCTRKISIAKSVFYVAAQCLGAIIGAGILY---------------LVTPPSV 216
Query: 485 TAGIFATYPSGHLDMVNGFFDQFIGTASLIVCVLAIVDPNNNPVPRGLEAFTVGLVVLVI 664
G+ T G+L +G + I T L+ + A D V G A +G V I
Sbjct: 217 VGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDV-TGSVALAIGFSV-AI 274
Query: 665 GTSMGFN-SGYAVNPARDFGPRLFTAIAGWGSEVFTTGRHWWWVPIVSPLLGSIAGVFVY 841
G N +G ++NPAR FGP + + W + W+ V P++G++ +Y
Sbjct: 275 GHLFAINYTGASMNPARSFGPAVI--MGNWENH---------WIYWVGPIIGAVLAGGLY 323
Query: 842 Q 844
+
Sbjct: 324 E 324
>ref|XP_850126.1| PREDICTED: similar to aquaporin 8 isoform 1 [Canis familiaris].
Length = 263
Score = 82.8 bits (203), Expect = 5e-16
Identities = 74/252 (29%), Positives = 106/252 (42%), Gaps = 5/252 (1%)
Frame = +2
Query: 116 RLLRQALAECLGTLILVMFGCGSVAQVVLSRGTHGGFLTINLAFGFAVTLGILVAGQVSG 295
R L+ L E LG+ + + GC SV + GT G L LA G A+ L I G +SG
Sbjct: 35 RFLQPCLVELLGSALFIFIGCLSV----IENGTDTGRLQPALAHGLALGLIIATLGNISG 90
Query: 296 AHLNPAVTFAMCFLAREPWIKLPVYTLAQTLGAFLGAGIIFGLY-YDAIWAFANNQLIVS 472
H NPAV+ A + + L Y +AQ G +GA + + + W
Sbjct: 91 GHFNPAVSLAATLIGGLNLVMLLPYWIAQLCGGLIGAALAKAVSPEERFW---------- 140
Query: 473 GPNGTAGIFATYPSGHLDMVNGFFDQFIGTA--SLIVCVLAIVDPNNNPVPRGLEAFTVG 646
+G A + P +V + I T +L VC+ AI + P L F++G
Sbjct: 141 NASGAAFVTVQEPG---QVVGAVVAELILTTLLALAVCMGAINEKTQGP----LAPFSIG 193
Query: 647 LVVLVIGTSMGFNSGYAVNPARDFGPRLFTAIAGWGSEVFTTGRHW--WWVPIVSPLLGS 820
V V + G SG +NPAR FGP + HW W+ + PLL S
Sbjct: 194 FAVTVDILAGGAVSGACMNPARAFGPAV-------------VANHWDFHWIYWLGPLLAS 240
Query: 821 IAGVFVYQLMIG 856
+ + +L IG
Sbjct: 241 LLVGLLIRLFIG 252
>ref|NP_001074369.1| lens fiber major intrinsic protein [Canis lupus familiaris].
Length = 263
Score = 79.3 bits (194), Expect = 6e-15
Identities = 74/247 (29%), Positives = 105/247 (42%), Gaps = 4/247 (1%)
Frame = +2
Query: 125 RQALAECLGTLILVMFGCGSVAQVVLSRGTHGGF--LTINLAFGFAVTLGILVAGQVSGA 298
R AE TL V FG G+ R T G L + LAFG A+ + G +SGA
Sbjct: 11 RAIFAEFFATLFYVFFGLGASL-----RWTPGPLHVLQVALAFGLALATLVQAVGHISGA 65
Query: 299 HLNPAVTFAMCFLAREPWIKLPVYTLAQTLGAFLGAGIIFGLYYDAIWAFANNQLIVSGP 478
H+NPAVTFA ++ ++ Y AQ LGA GA +++ + A+ N L P
Sbjct: 66 HVNPAVTFAFLVGSQMSLLRAFCYMAAQLLGAVAGAAVLYSVTPPAV--RGNLALNTLHP 123
Query: 479 NGTAGIFATYPSGHLDMVNGFFDQFIGTASLIVCVLAIVDPNNNPVPRGLEAFTVGLVVL 658
+ G T + T ++C+ A D N G A VG L
Sbjct: 124 GVSVGQATTV-------------EIFLTLQFVLCIFATYDERRNG-RLGSVALAVGF-SL 168
Query: 659 VIGTSMG-FNSGYAVNPARDFGPRLFTAIAGWGSEVFTTGRHW-WWVPIVSPLLGSIAGV 832
+G G + +G +NPAR F P + T FT HW +W V P++G G
Sbjct: 169 TLGHLFGMYYTGAGMNPARSFAPAILT-------RNFT--NHWVYW---VGPIIGGGLGS 216
Query: 833 FVYQLMI 853
+Y ++
Sbjct: 217 LLYDFLL 223
>ref|XP_543678.2| PREDICTED: similar to aquaporin 2 [Canis familiaris].
Length = 271
Score = 77.4 bits (189), Expect = 2e-14
Identities = 75/260 (28%), Positives = 109/260 (41%), Gaps = 4/260 (1%)
Frame = +2
Query: 125 RQALAECLGTLILVMFGCGSVAQVVLSRGTHGGFLTINLAFGFAVTLGILVAGQVSGAHL 304
R AE L TL+ V FG GS + + L I +AFG + + G VSGAH+
Sbjct: 11 RAVFAEFLATLLFVFFGLGSALNWPQALPS---VLQIAMAFGLGIGTLVQALGHVSGAHI 67
Query: 305 NPAVTFAMCFLAREPWIKLPVYTLAQTLGAFLGAGIIFGLYYDAIWAFANNQLIVS--GP 478
NPAVT A +++ Y AQ LGA GA ++ ++ L V+
Sbjct: 68 NPAVTVACLVGCHVSFLRAAFYVAAQLLGAVAGAALL----HEITPPHVRGDLAVNALSN 123
Query: 479 NGTAGIFATYPSGHLDMVNGFFDQFIGTASLIVCVLAIVDPNNNPVPRGLEAFTVGLVVL 658
N TAG T + T L++C+ A D G A ++G V
Sbjct: 124 NTTAGQAVTV-------------ELFLTLQLVLCIFASTDERRGD-NLGTPALSIGFSV- 168
Query: 659 VIGTSMGFN-SGYAVNPARDFGPRLFTAIAGWGSEVFTTGRHW-WWVPIVSPLLGSIAGV 832
+G +G + +G ++NPAR P + T HW +W + PL+G+I G
Sbjct: 169 ALGHLLGIHYTGCSMNPARSLAPAVVTG---------KFDDHWVFW---IGPLVGAILGS 216
Query: 833 FVYQLMIGCHLEPPPPSTDE 892
+Y + L PP S E
Sbjct: 217 LLYNYV----LFPPAKSLAE 232
>ref|XP_855567.1| PREDICTED: aquaporin 1 [Canis familiaris].
Length = 271
Score = 76.3 bits (186), Expect = 5e-14
Identities = 67/250 (26%), Positives = 106/250 (42%), Gaps = 7/250 (2%)
Frame = +2
Query: 125 RQALAECLGTLILVMFGCGSVAQV---VLSRGTHGGF---LTINLAFGFAVTLGILVAGQ 286
R +AE L ++ V GS V + T G + ++LAFG ++ G
Sbjct: 12 RAVVAEFLAMILFVFISIGSALGFNYPVRNNQTAGAAQDNVKVSLAFGLSIATLAQSVGH 71
Query: 287 VSGAHLNPAVTFAMCFLAREPWIKLPVYTLAQTLGAFLGAGIIFGLYYDAIWAFANNQLI 466
+SGAHLNPAVT + + ++ +Y +AQ +GA + I+ G +
Sbjct: 72 ISGAHLNPAVTLGLLLSCQISILRAVMYIIAQCVGAIVATAILSG-------------IT 118
Query: 467 VSGPNGTAGIFATYPSGHLDMVNGFFDQFIGTASLIVCVLAIVDPNNNPVPRGLEAFTVG 646
S P+ + G P ++ G + IGT L++CVLA D + G +G
Sbjct: 119 SSLPDNSLGRNELAPG--VNSGQGLGIEIIGTLQLVLCVLATTDRRRRDL-GGSGPLAIG 175
Query: 647 LVVLVIGTSMGFN-SGYAVNPARDFGPRLFTAIAGWGSEVFTTGRHWWWVPIVSPLLGSI 823
L V +G + + +G +NPAR F GS V T W+ V P +G
Sbjct: 176 LSV-ALGHLLAIDYTGCGINPARSF-----------GSSVITHNFKDHWIFWVGPFIGGA 223
Query: 824 AGVFVYQLMI 853
V +Y ++
Sbjct: 224 LAVLIYDFIL 233
>ref|NP_001003130.1| aquaporin-1 [Canis lupus familiaris].
Length = 271
Score = 76.3 bits (186), Expect = 5e-14
Identities = 67/250 (26%), Positives = 106/250 (42%), Gaps = 7/250 (2%)
Frame = +2
Query: 125 RQALAECLGTLILVMFGCGSVAQV---VLSRGTHGGF---LTINLAFGFAVTLGILVAGQ 286
R +AE L ++ V GS V + T G + ++LAFG ++ G
Sbjct: 12 RAVVAEFLAMILFVFISIGSALGFNYPVRNNQTAGAAQDNVKVSLAFGLSIATLAQSVGH 71
Query: 287 VSGAHLNPAVTFAMCFLAREPWIKLPVYTLAQTLGAFLGAGIIFGLYYDAIWAFANNQLI 466
+SGAHLNPAVT + + ++ +Y +AQ +GA + I+ G +
Sbjct: 72 ISGAHLNPAVTLGLLLSCQISILRAVMYIIAQCVGAIVATAILSG-------------IT 118
Query: 467 VSGPNGTAGIFATYPSGHLDMVNGFFDQFIGTASLIVCVLAIVDPNNNPVPRGLEAFTVG 646
S P+ + G P ++ G + IGT L++CVLA D + G +G
Sbjct: 119 SSLPDNSLGRNELAPG--VNSGQGLGIEIIGTLQLVLCVLATTDRRRRDL-GGSGPLAIG 175
Query: 647 LVVLVIGTSMGFN-SGYAVNPARDFGPRLFTAIAGWGSEVFTTGRHWWWVPIVSPLLGSI 823
L V +G + + +G +NPAR F GS V T W+ V P +G
Sbjct: 176 LSV-ALGHLLAIDYTGCGINPARSF-----------GSSVITHNFKDHWIFWVGPFIGGA 223
Query: 824 AGVFVYQLMI 853
V +Y ++
Sbjct: 224 LAVLIYDFIL 233
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 49,268,603
Number of extensions: 1594908
Number of successful extensions: 6447
Number of sequences better than 1.0e-05: 13
Number of HSP's gapped: 6414
Number of HSP's successfully gapped: 13
Length of query: 365
Length of database: 18,874,504
Length adjustment: 104
Effective length of query: 261
Effective length of database: 15,407,560
Effective search space: 4021373160
Effective search space used: 4021373160
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007253
(1096 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_004916.1| aquaporin-3 [Homo sapiens]. 567 e-162
Alignment gi|NP_066190.2| aquaporin-9 [Homo sapiens]. 288 6e-78
Alignment gi|NP_536354.2| aquaporin-10 [Homo sapiens]. 279 4e-75
Alignment gi|NP_001161.1| aquaporin-7 [Homo sapiens]. 275 5e-74
Alignment gi|XP_003403433.1| PREDICTED: aquaporin-7-like isoform 1 [Homo ... 256 3e-68
Alignment gi|XP_003403803.1| PREDICTED: aquaporin-7-like isoform 2 [Homo ... 256 3e-68
Alignment gi|XP_003403434.1| PREDICTED: aquaporin-7-like isoform 2 [Homo ... 202 4e-52
Alignment gi|XP_003119910.1| PREDICTED: aquaporin-7-like isoform 1 [Homo ... 202 4e-52
Alignment gi|NP_001642.1| aquaporin-5 [Homo sapiens]. 86 8e-17
Alignment gi|NP_004019.1| aquaporin-4 isoform b [Homo sapiens]. 84 2e-16
>ref|NP_004916.1| aquaporin-3 [Homo sapiens].
Length = 292
Score = 567 bits (1462), Expect = e-162
Identities = 273/290 (94%), Positives = 283/290 (97%)
Frame = +2
Query: 59 MGRQKELVTRCGEMLHIRYRLLRQALAECLGTLILVMFGCGSVAQVVLSRGTHGGFLTIN 238
MGRQKELV+RCGEMLHIRYRLLRQALAECLGTLILVMFGCGSVAQVVLSRGTHGGFLTIN
Sbjct: 1 MGRQKELVSRCGEMLHIRYRLLRQALAECLGTLILVMFGCGSVAQVVLSRGTHGGFLTIN 60
Query: 239 LAFGFAVTLGILVAGQVSGAHLNPAVTFAMCFLAREPWIKLPVYTLAQTLGAFLGAGIIF 418
LAFGFAVTLGIL+AGQVSGAHLNPAVTFAMCFLAREPWIKLP+YTLAQTLGAFLGAGI+F
Sbjct: 61 LAFGFAVTLGILIAGQVSGAHLNPAVTFAMCFLAREPWIKLPIYTLAQTLGAFLGAGIVF 120
Query: 419 GLYYDAIWAFANNQLIVSGPNGTAGIFATYPSGHLDMVNGFFDQFIGTASLIVCVLAIVD 598
GLYYDAIW FA+NQL VSGPNGTAGIFATYPSGHLDM+NGFFDQFIGTASLIVCVLAIVD
Sbjct: 121 GLYYDAIWHFADNQLFVSGPNGTAGIFATYPSGHLDMINGFFDQFIGTASLIVCVLAIVD 180
Query: 599 PNNNPVPRGLEAFTVGLVVLVIGTSMGFNSGYAVNPARDFGPRLFTAIAGWGSEVFTTGR 778
P NNPVPRGLEAFTVGLVVLVIGTSMGFNSGYAVNPARDFGPRLFTA+AGWGS VFTTG+
Sbjct: 181 PYNNPVPRGLEAFTVGLVVLVIGTSMGFNSGYAVNPARDFGPRLFTALAGWGSAVFTTGQ 240
Query: 779 HWWWVPIVSPLLGSIAGVFVYQLMIGCHLEPPPPSTDEENVKLSQVKHKE 928
HWWWVPIVSPLLGSIAGVFVYQLMIGCHLE PPPS +EENVKL+ VKHKE
Sbjct: 241 HWWWVPIVSPLLGSIAGVFVYQLMIGCHLEQPPPSNEEENVKLAHVKHKE 290
>ref|NP_066190.2| aquaporin-9 [Homo sapiens].
Length = 295
Score = 288 bits (737), Expect = 6e-78
Identities = 135/263 (51%), Positives = 180/263 (68%)
Frame = +2
Query: 95 EMLHIRYRLLRQALAECLGTLILVMFGCGSVAQVVLSRGTHGGFLTINLAFGFAVTLGIL 274
+ L ++ L ++ L+E LGT IL++ GCG VAQ +LSRG GG +TIN+ F AV + I
Sbjct: 14 QRLVLKSSLAKETLSEFLGTFILIVLGCGCVAQAILSRGRFGGVITINVGFSMAVAMAIY 73
Query: 275 VAGQVSGAHLNPAVTFAMCFLAREPWIKLPVYTLAQTLGAFLGAGIIFGLYYDAIWAFAN 454
VAG VSG H+NPAV+ AMC R W KLP Y AQ LGAF+GA +FG+YYD + +FA
Sbjct: 74 VAGGVSGGHINPAVSLAMCLFGRMKWFKLPFYVGAQFLGAFVGAATVFGIYYDGLMSFAG 133
Query: 455 NQLIVSGPNGTAGIFATYPSGHLDMVNGFFDQFIGTASLIVCVLAIVDPNNNPVPRGLEA 634
+L++ G N TA IFATYP+ +L + N F DQ + T L++ V AI D N PRGLE
Sbjct: 134 GKLLIVGENATAHIFATYPAPYLSLANAFADQVVATMILLIIVFAIFDSRNLGAPRGLEP 193
Query: 635 FTVGLVVLVIGTSMGFNSGYAVNPARDFGPRLFTAIAGWGSEVFTTGRHWWWVPIVSPLL 814
+GL+++VI +S+G NSG A+NPARD PRLFTA+AGWG EVF G ++WW+P+V PL+
Sbjct: 194 IAIGLLIIVIASSLGLNSGCAMNPARDLSPRLFTALAGWGFEVFRAGNNFWWIPVVGPLV 253
Query: 815 GSIAGVFVYQLMIGCHLEPPPPS 883
G++ G +Y L+I H P P S
Sbjct: 254 GAVIGGLIYVLVIEIH-HPEPDS 275
>ref|NP_536354.2| aquaporin-10 [Homo sapiens].
Length = 301
Score = 279 bits (713), Expect = 4e-75
Identities = 138/264 (52%), Positives = 174/264 (65%), Gaps = 1/264 (0%)
Frame = +2
Query: 101 LHIRYRLLRQALAECLGTLILVMFGCGSVAQVVLSRGTHGGFLTINLAFGFAVTLGILVA 280
L IR L RQ LAE LG +L++ G+VAQ V S T G F T+ LA AVT+ I V
Sbjct: 14 LRIRSLLARQCLAEFLGVFVLMLLTQGAVAQAVTSGETKGNFFTMFLAGSLAVTIAIYVG 73
Query: 281 GQVSGAHLNPAVTFAMCFLAREPWIKLPVYTLAQTLGAFLGAGIIFGLYYDAIWAFANNQ 460
G VSGAHLNPA + AMC + R PW+KLP+Y L Q L AF +G + LY+DA+ +
Sbjct: 74 GNVSGAHLNPAFSLAMCIVGRLPWVKLPIYILVQLLSAFCASGATYVLYHDALQNYTGGN 133
Query: 461 LIVSGPNGTAGIFATYPSGHLDMVNGFFDQFIGTASLIVCVLAIVDPNNNPVPRGLEAFT 640
L V+GP TA IFATYP+ +L + NGF DQ +GT LIV +LAI+D N VP GLE
Sbjct: 134 LTVTGPKETASIFATYPAPYLSLNNGFLDQVLGTGMLIVGLLAILDRRNKGVPAGLEPVV 193
Query: 641 VGLVVLVIGTSMGFNSGYAVNPARDFGPRLFTAIAGWGSEVFTTGRHWWWVPIVSPLLGS 820
VG+++L +G SMG N G +NPARD GPRLFT +AGWG EVF+ G WWWVP+V+PL+G+
Sbjct: 194 VGMLILALGLSMGANCGIPLNPARDLGPRLFTYVAGWGPEVFSAGNGWWWVPVVAPLVGA 253
Query: 821 IAGVFVYQLMIGC-HLEPPPPSTD 889
G YQL++ H E P P+ D
Sbjct: 254 TVGTATYQLLVALHHPEGPEPAQD 277
>ref|NP_001161.1| aquaporin-7 [Homo sapiens].
Length = 342
Score = 275 bits (703), Expect = 5e-74
Identities = 134/287 (46%), Positives = 190/287 (66%)
Frame = +2
Query: 107 IRYRLLRQALAECLGTLILVMFGCGSVAQVVLSRGTHGGFLTINLAFGFAVTLGILVAGQ 286
++ +++R+ LAE + T ++++FG GSVA +VL++ +G +L +NL FGF VT+G+ VAG+
Sbjct: 29 LQRKMVREFLAEFMSTYVMMVFGLGSVAHMVLNK-KYGSYLGVNLGFGFGVTMGVHVAGR 87
Query: 287 VSGAHLNPAVTFAMCFLAREPWIKLPVYTLAQTLGAFLGAGIIFGLYYDAIWAFANNQLI 466
+SGAH+N AVTFA C L R PW K PVY L Q LG+FL A I+ L+Y AI F+ QL+
Sbjct: 88 ISGAHMNAAVTFANCALGRVPWRKFPVYVLGQFLGSFLAAATIYSLFYTAILHFSGGQLM 147
Query: 467 VSGPNGTAGIFATYPSGHLDMVNGFFDQFIGTASLIVCVLAIVDPNNNPVPRGLEAFTVG 646
V+GP TAGIFATY H+ + GF ++ T L +C+ AI D NNP G EA +G
Sbjct: 148 VTGPVATAGIFATYLPDHMTLWRGFLNEAWLTGMLQLCLFAITDQENNPALPGTEALVIG 207
Query: 647 LVVLVIGTSMGFNSGYAVNPARDFGPRLFTAIAGWGSEVFTTGRHWWWVPIVSPLLGSIA 826
++V++IG S+G N+GYA+NP+RD PR+FT IAGWG +VF+ G +WWWVP+V+PLLG+
Sbjct: 208 ILVVIIGVSLGMNTGYAINPSRDLPPRIFTFIAGWGKQVFSNGENWWWVPVVAPLLGAYL 267
Query: 827 GVFVYQLMIGCHLEPPPPSTDEENVKLSQVKHKE*MRMGRRHPPHCP 967
G +Y + IG + P P E++V +MG P P
Sbjct: 268 GGIIYLVFIGSTI-PREPLKLEDSVAYEDHGITVLPKMGSHEPTISP 313
>ref|XP_003403433.1| PREDICTED: aquaporin-7-like isoform 1 [Homo sapiens].
Length = 346
Score = 256 bits (654), Expect = 3e-68
Identities = 127/284 (44%), Positives = 182/284 (64%)
Frame = +2
Query: 116 RLLRQALAECLGTLILVMFGCGSVAQVVLSRGTHGGFLTINLAFGFAVTLGILVAGQVSG 295
+++R+ LAE + T ++++FG GSVA +VL++ T+G +L +NL FGF VT+G+ VAG++SG
Sbjct: 36 KMVREFLAEFMSTYVMMVFGLGSVAHMVLNK-TYGSYLGVNLGFGFGVTMGVHVAGRISG 94
Query: 296 AHLNPAVTFAMCFLAREPWIKLPVYTLAQTLGAFLGAGIIFGLYYDAIWAFANNQLIVSG 475
AH+N AVTF C L R PW K PV+ L Q LG+FL A I+ L+Y AI F+ +L+V+G
Sbjct: 95 AHMNAAVTFTNCALGRVPWRKFPVHVLGQFLGSFLAAATIYSLFYTAILHFSGGELMVTG 154
Query: 476 PNGTAGIFATYPSGHLDMVNGFFDQFIGTASLIVCVLAIVDPNNNPVPRGLEAFTVGLVV 655
P TAGIFATY H+ + GF ++ T L +C+ I D NNP G A + ++V
Sbjct: 155 PFATAGIFATYLPDHMTLWRGFLNEEWLTRMLQLCLFTITDQENNPALPGTHALVISILV 214
Query: 656 LVIGTSMGFNSGYAVNPARDFGPRLFTAIAGWGSEVFTTGRHWWWVPIVSPLLGSIAGVF 835
++I S G N+GYA+NP+RD P +FT IAGWG +VF+ G +WWWVP+V+PLLG+ G
Sbjct: 215 VIIRVSHGINTGYAINPSRDPPPSIFTFIAGWGKQVFSDGENWWWVPVVAPLLGASLGGI 274
Query: 836 VYQLMIGCHLEPPPPSTDEENVKLSQVKHKE*MRMGRRHPPHCP 967
+Y + IG + P P E++V +MG P P
Sbjct: 275 IYLVFIGSTI-PREPLKLEDSVAYEDHGITVLPKMGSHEPMISP 317
>ref|XP_003403803.1| PREDICTED: aquaporin-7-like isoform 2 [Homo sapiens].
Length = 346
Score = 256 bits (654), Expect = 3e-68
Identities = 127/284 (44%), Positives = 182/284 (64%)
Frame = +2
Query: 116 RLLRQALAECLGTLILVMFGCGSVAQVVLSRGTHGGFLTINLAFGFAVTLGILVAGQVSG 295
+++R+ LAE + T ++++FG GSVA +VL++ T+G +L +NL FGF VT+G+ VAG++SG
Sbjct: 36 KMVREFLAEFMSTYVMMVFGLGSVAHMVLNK-TYGSYLGVNLGFGFGVTMGVHVAGRISG 94
Query: 296 AHLNPAVTFAMCFLAREPWIKLPVYTLAQTLGAFLGAGIIFGLYYDAIWAFANNQLIVSG 475
AH+N AVTF C L R PW K PV+ L Q LG+FL A I+ L+Y AI F+ +L+V+G
Sbjct: 95 AHMNAAVTFTNCALGRVPWRKFPVHVLGQFLGSFLAAATIYSLFYTAILHFSGGELMVTG 154
Query: 476 PNGTAGIFATYPSGHLDMVNGFFDQFIGTASLIVCVLAIVDPNNNPVPRGLEAFTVGLVV 655
P TAGIFATY H+ + GF ++ T L +C+ I D NNP G A + ++V
Sbjct: 155 PFATAGIFATYLPDHMTLWRGFLNEEWLTRMLQLCLFTITDQENNPALPGTHALVISILV 214
Query: 656 LVIGTSMGFNSGYAVNPARDFGPRLFTAIAGWGSEVFTTGRHWWWVPIVSPLLGSIAGVF 835
++I S G N+GYA+NP+RD P +FT IAGWG +VF+ G +WWWVP+V+PLLG+ G
Sbjct: 215 VIIRVSHGINTGYAINPSRDPPPSIFTFIAGWGKQVFSDGENWWWVPVVAPLLGASLGGI 274
Query: 836 VYQLMIGCHLEPPPPSTDEENVKLSQVKHKE*MRMGRRHPPHCP 967
+Y + IG + P P E++V +MG P P
Sbjct: 275 IYLVFIGSTI-PREPLKLEDSVAYEDHGITVLPKMGSHEPMISP 317
>ref|XP_003403434.1| PREDICTED: aquaporin-7-like isoform 2 [Homo sapiens].
Length = 216
Score = 202 bits (514), Expect = 4e-52
Identities = 99/211 (46%), Positives = 134/211 (63%), Gaps = 4/211 (1%)
Frame = +2
Query: 212 THGGFLTINLAFGFAVTLGILVAGQVSGAHLNPAVTFAMCFLAREPWIKLPVYTLAQTLG 391
T+G +L +NL FGF VT+G+ VAG++SGAH+N AVTF C L R PW K PV+ L Q LG
Sbjct: 6 TYGSYLGVNLGFGFGVTMGVHVAGRISGAHMNAAVTFTNCALGRVPWRKFPVHVLGQFLG 65
Query: 392 AFLGAGIIFGLYYDAIWAFANNQLIVSGPNGTAGIFATYPSGHLDMVNGFFDQFIGTASL 571
+FL A I+ L+Y AI F+ +L+V+GP TAGIFATY H+ + GF ++ T L
Sbjct: 66 SFLAAATIYSLFYTAILHFSGGELMVTGPFATAGIFATYLPDHMTLWRGFLNEEWLTRML 125
Query: 572 IVCVLAIVDPNNNPVPRGLEAFTVGLVVLVIGTSMGFNSGYAVNPARDFGPRLFTAIAGW 751
+C+ I D NNP G A + ++V++I S G N+GYA+NP+RD P +FT IAGW
Sbjct: 126 QLCLFTITDQENNPALPGTHALVISILVVIIRVSHGINTGYAINPSRDPPPSIFTFIAGW 185
Query: 752 GSEVF----TTGRHWWWVPIVSPLLGSIAGV 832
G +VF G HW P +P +G + GV
Sbjct: 186 GKQVFRWHHLPGLHWLHHPTGAPEIGGLCGV 216
>ref|XP_003119910.1| PREDICTED: aquaporin-7-like isoform 1 [Homo sapiens].
Length = 216
Score = 202 bits (514), Expect = 4e-52
Identities = 99/211 (46%), Positives = 134/211 (63%), Gaps = 4/211 (1%)
Frame = +2
Query: 212 THGGFLTINLAFGFAVTLGILVAGQVSGAHLNPAVTFAMCFLAREPWIKLPVYTLAQTLG 391
T+G +L +NL FGF VT+G+ VAG++SGAH+N AVTF C L R PW K PV+ L Q LG
Sbjct: 6 TYGSYLGVNLGFGFGVTMGVHVAGRISGAHMNAAVTFTNCALGRVPWRKFPVHVLGQFLG 65
Query: 392 AFLGAGIIFGLYYDAIWAFANNQLIVSGPNGTAGIFATYPSGHLDMVNGFFDQFIGTASL 571
+FL A I+ L+Y AI F+ +L+V+GP TAGIFATY H+ + GF ++ T L
Sbjct: 66 SFLAAATIYSLFYTAILHFSGGELMVTGPFATAGIFATYLPDHMTLWRGFLNEEWLTRML 125
Query: 572 IVCVLAIVDPNNNPVPRGLEAFTVGLVVLVIGTSMGFNSGYAVNPARDFGPRLFTAIAGW 751
+C+ I D NNP G A + ++V++I S G N+GYA+NP+RD P +FT IAGW
Sbjct: 126 QLCLFTITDQENNPALPGTHALVISILVVIIRVSHGINTGYAINPSRDPPPSIFTFIAGW 185
Query: 752 GSEVF----TTGRHWWWVPIVSPLLGSIAGV 832
G +VF G HW P +P +G + GV
Sbjct: 186 GKQVFRWHHLPGLHWLHHPTGAPEIGGLCGV 216
>ref|NP_001642.1| aquaporin-5 [Homo sapiens].
Length = 265
Score = 85.5 bits (210), Expect = 8e-17
Identities = 71/241 (29%), Positives = 106/241 (43%), Gaps = 1/241 (0%)
Frame = +2
Query: 122 LRQALAECLGTLILVMFGCGSVAQVVLSRGTHGGFLTINLAFGFAVTLGILVAGQVSGAH 301
L+ AE L TLI V FG GS + + T L I LAFG A+ G VSG H
Sbjct: 11 LKAVFAEFLATLIFVFFGLGSALKWPSALPT---ILQIALAFGLAIGTLAQALGPVSGGH 67
Query: 302 LNPAVTFAMCFLAREPWIKLPVYTLAQTLGAFLGAGIIFGLYYDAIWAFANNQLIVSGPN 481
+NPA+T A+ + ++ Y AQ +GA GAGI++G V+ N
Sbjct: 68 INPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYG---------------VAPLN 112
Query: 482 GTAGIFATYPSGHLDMVNGFFDQFIGTASLIVCVLAIVDPNNNPVPRGLEAFTVGLVVLV 661
+ + + + I T L +C+ A D + P G A ++GL V
Sbjct: 113 ARGNLAVNALNNNTTQGQAMVVELILTFQLALCIFASTD-SRRTSPVGSPALSIGLSV-T 170
Query: 662 IGTSMG-FNSGYAVNPARDFGPRLFTAIAGWGSEVFTTGRHWWWVPIVSPLLGSIAGVFV 838
+G +G + +G ++NPAR FGP + V WV V P++G++ +
Sbjct: 171 LGHLVGIYFTGCSMNPARSFGPAV----------VMNRFSPAHWVFWVGPIVGAVLAAIL 220
Query: 839 Y 841
Y
Sbjct: 221 Y 221
>ref|NP_004019.1| aquaporin-4 isoform b [Homo sapiens].
Length = 301
Score = 84.3 bits (207), Expect = 2e-16
Identities = 70/241 (29%), Positives = 106/241 (43%), Gaps = 5/241 (2%)
Frame = +2
Query: 137 AECLGTLILVMFGCGSVAQVVLSRGTHG----GFLTINLAFGFAVTLGILVAGQVSGAHL 304
AE L LI V+ GS + GT + I+L FG ++ + G +SG H+
Sbjct: 18 AEFLAMLIFVLLSLGST---INWGGTEKPLPVDMVLISLCFGLSIATMVQCFGHISGGHI 74
Query: 305 NPAVTFAMCFLAREPWIKLPVYTLAQTLGAFLGAGIIFGLYYDAIWAFANNQLIVSGPNG 484
NPAVT AM + K Y AQ LGA +GAGI++ +V+ P+
Sbjct: 75 NPAVTVAMVCTRKISIAKSVFYIAAQCLGAIIGAGILY---------------LVTPPSV 119
Query: 485 TAGIFATYPSGHLDMVNGFFDQFIGTASLIVCVLAIVDPNNNPVPRGLEAFTVGLVVLVI 664
G+ T G+L +G + I T L+ + A D V G A +G V I
Sbjct: 120 VGGLGVTMVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDV-TGSIALAIGFSV-AI 177
Query: 665 GTSMGFN-SGYAVNPARDFGPRLFTAIAGWGSEVFTTGRHWWWVPIVSPLLGSIAGVFVY 841
G N +G ++NPAR FGP + + W + W+ V P++G++ +Y
Sbjct: 178 GHLFAINYTGASMNPARSFGPAVI--MGNWENH---------WIYWVGPIIGAVLAGGLY 226
Query: 842 Q 844
+
Sbjct: 227 E 227
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 48,123,843
Number of extensions: 1554651
Number of successful extensions: 6208
Number of sequences better than 1.0e-05: 16
Number of HSP's gapped: 6161
Number of HSP's successfully gapped: 16
Length of query: 365
Length of database: 18,297,164
Length adjustment: 104
Effective length of query: 261
Effective length of database: 14,868,908
Effective search space: 3880784988
Effective search space used: 3880784988
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007253
(1096 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_057898.2| aquaporin-3 [Mus musculus]. 571 e-163
Alignment gi|NP_071309.1| aquaporin-9 [Mus musculus]. 284 7e-77
Alignment gi|NP_031499.1| aquaporin-7 [Mus musculus]. 249 3e-66
Alignment gi|NP_033830.2| aquaporin-4 [Mus musculus]. 91 2e-18
Alignment gi|NP_033829.3| aquaporin-2 [Mus musculus]. 82 6e-16
Alignment gi|NP_033831.1| aquaporin-5 [Mus musculus]. 81 1e-15
Alignment gi|NP_032626.2| lens fiber major intrinsic protein [Mus musculu... 78 1e-14
Alignment gi|NP_031498.1| aquaporin-1 [Mus musculus]. 74 2e-13
Alignment gi|NP_001102515.1| aquaporin-8 isoform 2 [Mus musculus]. 68 1e-11
Alignment gi|NP_031500.1| aquaporin-8 isoform 1 [Mus musculus]. 68 1e-11
>ref|NP_057898.2| aquaporin-3 [Mus musculus].
Length = 292
Score = 571 bits (1472), Expect = e-163
Identities = 275/290 (94%), Positives = 284/290 (97%)
Frame = +2
Query: 59 MGRQKELVTRCGEMLHIRYRLLRQALAECLGTLILVMFGCGSVAQVVLSRGTHGGFLTIN 238
MGRQKEL+ RCGEMLHIRYRLLRQALAECLGTLILVMFGCGSVAQVVLSRGTHGGFLTIN
Sbjct: 1 MGRQKELMNRCGEMLHIRYRLLRQALAECLGTLILVMFGCGSVAQVVLSRGTHGGFLTIN 60
Query: 239 LAFGFAVTLGILVAGQVSGAHLNPAVTFAMCFLAREPWIKLPVYTLAQTLGAFLGAGIIF 418
LAFGFAVTLGILVAGQVSGAHLNPAVTFAMCFLAREPWIKLP+Y LAQTLGAFLGAGI+F
Sbjct: 61 LAFGFAVTLGILVAGQVSGAHLNPAVTFAMCFLAREPWIKLPIYALAQTLGAFLGAGIVF 120
Query: 419 GLYYDAIWAFANNQLIVSGPNGTAGIFATYPSGHLDMVNGFFDQFIGTASLIVCVLAIVD 598
GLYYDAIWAFANN+L VSGPNGTAGIFATYPSGHLDMVNGFFDQFIGTA+LIVCVLAIVD
Sbjct: 121 GLYYDAIWAFANNELFVSGPNGTAGIFATYPSGHLDMVNGFFDQFIGTAALIVCVLAIVD 180
Query: 599 PNNNPVPRGLEAFTVGLVVLVIGTSMGFNSGYAVNPARDFGPRLFTAIAGWGSEVFTTGR 778
P NNPVPRGLEAFTVGLVVLVIGTSMGFNSGYAVNPARDFGPRLFTA+AGWGSEVFTTGR
Sbjct: 181 PYNNPVPRGLEAFTVGLVVLVIGTSMGFNSGYAVNPARDFGPRLFTALAGWGSEVFTTGR 240
Query: 779 HWWWVPIVSPLLGSIAGVFVYQLMIGCHLEPPPPSTDEENVKLSQVKHKE 928
HWWWVPIVSPLLGSIAGVFVYQLMIGCHLE PPPST+EENVKL+ +KHKE
Sbjct: 241 HWWWVPIVSPLLGSIAGVFVYQLMIGCHLEQPPPSTEEENVKLAHMKHKE 290
>ref|NP_071309.1| aquaporin-9 [Mus musculus].
Length = 295
Score = 284 bits (727), Expect = 7e-77
Identities = 137/286 (47%), Positives = 186/286 (65%)
Frame = +2
Query: 68 QKELVTRCGEMLHIRYRLLRQALAECLGTLILVMFGCGSVAQVVLSRGTHGGFLTINLAF 247
+K LV R L ++ L ++ L+E LGT I+++ GCGS+AQ VLSR GG +TIN+ F
Sbjct: 9 KKNLVQR----LALKSCLAKETLSEFLGTFIMIVLGCGSIAQAVLSREKAGGIITINIGF 64
Query: 248 GFAVTLGILVAGQVSGAHLNPAVTFAMCFLAREPWIKLPVYTLAQTLGAFLGAGIIFGLY 427
AV + + VSG H+NPAV+FAMC R W K P Y AQ LGAF+GA +FG+Y
Sbjct: 65 ATAVVMALYATFGVSGGHINPAVSFAMCTFGRMEWFKFPFYVGAQLLGAFVGAATVFGIY 124
Query: 428 YDAIWAFANNQLIVSGPNGTAGIFATYPSGHLDMVNGFFDQFIGTASLIVCVLAIVDPNN 607
YD + AFA+ +L+++G NGTA IFATYP + + F DQ + T L++ V AI D N
Sbjct: 125 YDGLMAFADGKLLITGENGTAFIFATYPKPFVSVPGAFVDQVVSTMFLLLIVFAIFDSRN 184
Query: 608 NPVPRGLEAFTVGLVVLVIGTSMGFNSGYAVNPARDFGPRLFTAIAGWGSEVFTTGRHWW 787
VPRGLE +GL+++VI S+G NSG A+NPARD PRLFTA+AGWG EVFT G ++W
Sbjct: 185 LGVPRGLEPIVIGLLIIVISCSLGLNSGCAMNPARDLSPRLFTALAGWGFEVFTFGNNFW 244
Query: 788 WVPIVSPLLGSIAGVFVYQLMIGCHLEPPPPSTDEENVKLSQVKHK 925
W+P+V P++G++ G +Y L I H P P E + + KH+
Sbjct: 245 WIPVVGPMIGAVLGGLIYVLFIQMHHSNPDPEVKAEPAENNLEKHE 290
>ref|NP_031499.1| aquaporin-7 [Mus musculus].
Length = 303
Score = 249 bits (636), Expect = 3e-66
Identities = 119/245 (48%), Positives = 162/245 (66%)
Frame = +2
Query: 107 IRYRLLRQALAECLGTLILVMFGCGSVAQVVLSRGTHGGFLTINLAFGFAVTLGILVAGQ 286
++ ++R+ LAE L T ++++FG GSVA +VL + G +L +NL FGF VT+G+ VAG
Sbjct: 14 LQKNMVREFLAEFLSTYVMMVFGLGSVAHMVLGENS-GSYLGVNLGFGFGVTMGVHVAGG 72
Query: 287 VSGAHLNPAVTFAMCFLAREPWIKLPVYTLAQTLGAFLGAGIIFGLYYDAIWAFANNQLI 466
+SGAH+N AVTF C L R W K PVY L Q LG+F A + ++Y AI FA L+
Sbjct: 73 ISGAHMNAAVTFTNCALGRMTWKKFPVYVLGQFLGSFSAAATTYLIFYGAINHFAGGDLL 132
Query: 467 VSGPNGTAGIFATYPSGHLDMVNGFFDQFIGTASLIVCVLAIVDPNNNPVPRGLEAFTVG 646
V+G TA IFATY ++ + GF D+ T L +C+ AI D N+P +G E +G
Sbjct: 133 VTGSKATANIFATYLPEYMTLWRGFLDEAFVTGMLQLCLFAITDKKNSPALQGTEPLVIG 192
Query: 647 LVVLVIGTSMGFNSGYAVNPARDFGPRLFTAIAGWGSEVFTTGRHWWWVPIVSPLLGSIA 826
++V V+G S+G NSGYA+NP+RD PRLFT IAGWG +VF G +WWWVP+V+PLLG+
Sbjct: 193 ILVTVLGVSLGMNSGYAINPSRDLPPRLFTFIAGWGKQVFRAGNNWWWVPVVAPLLGAYL 252
Query: 827 GVFVY 841
G VY
Sbjct: 253 GGIVY 257
>ref|NP_033830.2| aquaporin-4 [Mus musculus].
Length = 323
Score = 90.9 bits (224), Expect = 2e-18
Identities = 71/238 (29%), Positives = 107/238 (44%), Gaps = 2/238 (0%)
Frame = +2
Query: 137 AECLGTLILVMFGCGSVAQVVLSRGTHG-GFLTINLAFGFAVTLGILVAGQVSGAHLNPA 313
AE L TLI V+ G GS S + I+L FG ++ + G +SG H+NPA
Sbjct: 40 AEFLATLIFVLLGVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPA 99
Query: 314 VTFAMCFLAREPWIKLPVYTLAQTLGAFLGAGIIFGLYYDAIWAFANNQLIVSGPNGTAG 493
VT AM + K Y +AQ LGA +GAGI++ +V+ P+ G
Sbjct: 100 VTVAMVCTRKISIAKSVFYIIAQCLGAIIGAGILY---------------LVTPPSVVGG 144
Query: 494 IFATYPSGHLDMVNGFFDQFIGTASLIVCVLAIVDPNNNPVPRGLEAFTVGLVVLVIGTS 673
+ T G+L +G + I T L+ + A D V G A +G V IG
Sbjct: 145 LGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDV-TGSIALAIGFSV-AIGHL 202
Query: 674 MGFN-SGYAVNPARDFGPRLFTAIAGWGSEVFTTGRHWWWVPIVSPLLGSIAGVFVYQ 844
N +G ++NPAR FGP + + W + W+ V P++G++ +Y+
Sbjct: 203 FAINYTGASMNPARSFGPAVI--MGNWANH---------WIYWVGPIMGAVLAGALYE 249
>ref|NP_033829.3| aquaporin-2 [Mus musculus].
Length = 271
Score = 82.4 bits (202), Expect = 6e-16
Identities = 79/272 (29%), Positives = 117/272 (43%), Gaps = 4/272 (1%)
Frame = +2
Query: 125 RQALAECLGTLILVMFGCGSVAQVVLSRGTHGGFLTINLAFGFAVTLGILVAGQVSGAHL 304
R LAE L TL+ V FG GS Q S + L I +AFG + + G VSGAH+
Sbjct: 11 RAVLAEFLATLLFVFFGLGSALQWASSPPS---VLQIAVAFGLGIGTLVQALGHVSGAHI 67
Query: 305 NPAVTFAMCFLAREPWIKLPVYTLAQTLGAFLGAGIIFGLYYDAIWAFANNQLIVSG--P 478
NPAVT A +++ Y AQ LGA GA I+ ++ L V+
Sbjct: 68 NPAVTVACLVGCHVSFLRAAFYVAAQLLGAVAGAAIL----HEITPVEIRGDLAVNALHN 123
Query: 479 NGTAGIFATYPSGHLDMVNGFFDQFIGTASLIVCVLAIVDPNNNPVPRGLEAFTVGLVVL 658
N TAG T + T L++C+ A D + G A ++G V
Sbjct: 124 NATAGQAVTV-------------ELFLTMQLVLCIFASTDERRSD-NLGSPALSIGFSV- 168
Query: 659 VIGTSMG-FNSGYAVNPARDFGPRLFTAIAGWGSEVFTTGRHW-WWVPIVSPLLGSIAGV 832
+G +G + +G ++NPAR P + T HW +W + PL+G++ G
Sbjct: 169 TLGHLLGIYFTGCSMNPARSLAPAVVTG---------KFDDHWVFW---IGPLVGAVIGS 216
Query: 833 FVYQLMIGCHLEPPPPSTDEENVKLSQVKHKE 928
+Y ++ PST +L+ +K E
Sbjct: 217 LLYNYLLF-------PSTKSLQERLAVLKGLE 241
>ref|NP_033831.1| aquaporin-5 [Mus musculus].
Length = 265
Score = 81.3 bits (199), Expect = 1e-15
Identities = 68/240 (28%), Positives = 105/240 (43%), Gaps = 1/240 (0%)
Frame = +2
Query: 125 RQALAECLGTLILVMFGCGSVAQVVLSRGTHGGFLTINLAFGFAVTLGILVAGQVSGAHL 304
+ AE L TLI V FG GS + + T L I++AFG A+ G VSG H+
Sbjct: 12 KAVFAEFLATLIFVFFGLGSALKWPSALPT---ILQISIAFGLAIGTLAQALGPVSGGHI 68
Query: 305 NPAVTFAMCFLAREPWIKLPVYTLAQTLGAFLGAGIIFGLYYDAIWAFANNQLIVSGPNG 484
NPA+T A+ + ++ Y AQ +GA GAGI++ L + N
Sbjct: 69 NPAITLALLIGNQISLLRAIFYVAAQLVGAIAGAGILYWL---------------APGNA 113
Query: 485 TAGIFATYPSGHLDMVNGFFDQFIGTASLIVCVLAIVDPNNNPVPRGLEAFTVGLVVLVI 664
+ S + + I T L +C+ + D + P G A ++GL V +
Sbjct: 114 RGNLAVNALSNNTTPGKAVVVELILTFQLALCIFSSTD-SRRTSPVGSPALSIGLSV-TL 171
Query: 665 GTSMG-FNSGYAVNPARDFGPRLFTAIAGWGSEVFTTGRHWWWVPIVSPLLGSIAGVFVY 841
G +G + +G ++NPAR FGP + V WV V P++G++ +Y
Sbjct: 172 GHLVGIYFTGCSMNPARSFGPAV----------VMNRFSPSHWVFWVGPIVGAVLAAILY 221
>ref|NP_032626.2| lens fiber major intrinsic protein [Mus musculus].
Length = 263
Score = 77.8 bits (190), Expect = 1e-14
Identities = 72/247 (29%), Positives = 101/247 (40%), Gaps = 4/247 (1%)
Frame = +2
Query: 125 RQALAECLGTLILVMFGCGSVAQVVLSRGTHGGF--LTINLAFGFAVTLGILVAGQVSGA 298
R AE TL V FG G+ R G L + LAFG A+ + G +SGA
Sbjct: 11 RAIFAEFFATLFYVFFGLGASL-----RWAPGPLHVLQVALAFGLALATLVQTVGHISGA 65
Query: 299 HLNPAVTFAMCFLAREPWIKLPVYTLAQTLGAFLGAGIIFGLYYDAIWAFANNQLIVSGP 478
H+NPAVTFA ++ ++ Y AQ LGA GA +++ + A V G
Sbjct: 66 HVNPAVTFAFLVGSQMSLLRAFCYIAAQLLGAVAGAAVLYSVTPPA----------VRGN 115
Query: 479 NGTAGIFATYPSGHLDMVNGFFDQFIGTASLIVCVLAIVDPNNNPVPRGLEAFTVGLVVL 658
+ A G V F T ++C+ A D N G A VG L
Sbjct: 116 LALNTLHAGVSVGQATTVEIFL-----TLQFVLCIFATYDERRNG-RMGSVALAVGF-SL 168
Query: 659 VIGTSMG-FNSGYAVNPARDFGPRLFTAIAGWGSEVFTTGRHW-WWVPIVSPLLGSIAGV 832
+G G + +G +NPAR F P + T HW +W V P++G G
Sbjct: 169 TLGHLFGMYYTGAGMNPARSFAPAILTR---------NFSNHWVYW---VGPIIGGGLGS 216
Query: 833 FVYQLMI 853
+Y ++
Sbjct: 217 LLYDFLL 223
>ref|NP_031498.1| aquaporin-1 [Mus musculus].
Length = 269
Score = 74.3 bits (181), Expect = 2e-13
Identities = 55/208 (26%), Positives = 88/208 (42%), Gaps = 1/208 (0%)
Frame = +2
Query: 233 INLAFGFAVTLGILVAGQVSGAHLNPAVTFAMCFLAREPWIKLPVYTLAQTLGAFLGAGI 412
++LAFG ++ G +SGAHLNPAVT + + ++ +Y +AQ +GA + I
Sbjct: 52 VSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAVMYIIAQCVGAIVATAI 111
Query: 413 IFGLYYDAIWAFANNQLIVSGPNGTAGIFATYPSGHLDMVNGFFDQFIGTASLIVCVLAI 592
+ G+ + + G N G+ + IGT L++CVLA
Sbjct: 112 LSGITSSLVDNSLGRNDLAHGVNSGQGLGI---------------EIIGTLQLVLCVLAT 156
Query: 593 VDPNNNPVPRGLEAFTVGLVVLVIGTSMGFN-SGYAVNPARDFGPRLFTAIAGWGSEVFT 769
D + G +GL V +G + + +G +NPAR F GS V T
Sbjct: 157 TDRRRRDL-GGSAPLAIGLSV-ALGHLLAIDYTGCGINPARSF-----------GSAVLT 203
Query: 770 TGRHWWWVPIVSPLLGSIAGVFVYQLMI 853
W+ V P +G V +Y ++
Sbjct: 204 RNFSNHWIFWVGPFIGGALAVLIYDFIL 231
>ref|NP_001102515.1| aquaporin-8 isoform 2 [Mus musculus].
Length = 260
Score = 67.8 bits (164), Expect = 1e-11
Identities = 67/260 (25%), Positives = 111/260 (42%), Gaps = 3/260 (1%)
Frame = +2
Query: 86 RCGEMLHIRYRLLRQALAECLGTLILVMFGCGSVAQVVLSRGTHGGFLTINLAFGFAVTL 265
RC + +Y ++ + E +G+ + + GC SV + + G L LA G A+ L
Sbjct: 24 RCRVFWYEQY--VQPCIVELVGSALFIFIGCLSV----IENSPNTGLLQPALAHGLALGL 77
Query: 266 GILVAGQVSGAHLNPAVTFAMCFLAREPWIKLPVYTLAQTLGAFLGAGIIFGLY-YDAIW 442
I G +SG H NPAV+ A+ + + L Y ++Q G +GA + + + W
Sbjct: 78 IIATLGNISGGHFNPAVSLAVTVIGGLKTMLLIPYWISQLFGGLIGAALAKVVSPEERFW 137
Query: 443 AFANNQLIVSGPNGTAGIFATYPSGHLDMVNGFFDQFIGTASLI--VCVLAIVDPNNNPV 616
N + FA + + I T L+ VC+ A+ + P
Sbjct: 138 ------------NASGAAFAIVQEQE-QVAEALGIEIILTMLLVLAVCMGAVNEKTMGP- 183
Query: 617 PRGLEAFTVGLVVLVIGTSMGFNSGYAVNPARDFGPRLFTAIAGWGSEVFTTGRHWWWVP 796
L F++G V+V + G SG +NPAR FGP +AG+ + W+
Sbjct: 184 ---LAPFSIGFSVIVDILAGGSISGACMNPARAFGP---AVMAGYWD--------FHWIY 229
Query: 797 IVSPLLGSIAGVFVYQLMIG 856
+ PLL + + +L+IG
Sbjct: 230 WLGPLLAGLFVGLLIRLLIG 249
>ref|NP_031500.1| aquaporin-8 isoform 1 [Mus musculus].
Length = 261
Score = 67.8 bits (164), Expect = 1e-11
Identities = 67/260 (25%), Positives = 111/260 (42%), Gaps = 3/260 (1%)
Frame = +2
Query: 86 RCGEMLHIRYRLLRQALAECLGTLILVMFGCGSVAQVVLSRGTHGGFLTINLAFGFAVTL 265
RC + +Y ++ + E +G+ + + GC SV + + G L LA G A+ L
Sbjct: 25 RCRVFWYEQY--VQPCIVELVGSALFIFIGCLSV----IENSPNTGLLQPALAHGLALGL 78
Query: 266 GILVAGQVSGAHLNPAVTFAMCFLAREPWIKLPVYTLAQTLGAFLGAGIIFGLY-YDAIW 442
I G +SG H NPAV+ A+ + + L Y ++Q G +GA + + + W
Sbjct: 79 IIATLGNISGGHFNPAVSLAVTVIGGLKTMLLIPYWISQLFGGLIGAALAKVVSPEERFW 138
Query: 443 AFANNQLIVSGPNGTAGIFATYPSGHLDMVNGFFDQFIGTASLI--VCVLAIVDPNNNPV 616
N + FA + + I T L+ VC+ A+ + P
Sbjct: 139 ------------NASGAAFAIVQEQE-QVAEALGIEIILTMLLVLAVCMGAVNEKTMGP- 184
Query: 617 PRGLEAFTVGLVVLVIGTSMGFNSGYAVNPARDFGPRLFTAIAGWGSEVFTTGRHWWWVP 796
L F++G V+V + G SG +NPAR FGP +AG+ + W+
Sbjct: 185 ---LAPFSIGFSVIVDILAGGSISGACMNPARAFGP---AVMAGYWD--------FHWIY 230
Query: 797 IVSPLLGSIAGVFVYQLMIG 856
+ PLL + + +L+IG
Sbjct: 231 WLGPLLAGLFVGLLIRLLIG 250
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 40,331,067
Number of extensions: 1274880
Number of successful extensions: 5020
Number of sequences better than 1.0e-05: 11
Number of HSP's gapped: 4984
Number of HSP's successfully gapped: 11
Length of query: 365
Length of database: 15,617,559
Length adjustment: 103
Effective length of query: 262
Effective length of database: 12,523,851
Effective search space: 3281248962
Effective search space used: 3281248962
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007253
(1096 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_003357769.1| PREDICTED: aquaporin-3-like [Sus scrofa]. 593 e-170
Alignment gi|NP_001103642.1| aquaporin-3 [Sus scrofa]. 593 e-170
Alignment gi|NP_001106154.1| aquaporin-9 [Sus scrofa]. 291 4e-79
Alignment gi|NP_001121926.1| aquaporin-10 [Sus scrofa]. 278 3e-75
Alignment gi|NP_001106909.1| aquaporin-7 [Sus scrofa]. 263 2e-70
Alignment gi|XP_003360797.1| PREDICTED: aquaporin-10-like, partial [Sus s... 243 1e-64
Alignment gi|NP_001103893.1| aquaporin-4 [Sus scrofa]. 84 1e-16
Alignment gi|NP_001103894.1| aquaporin-5 [Sus scrofa]. 83 2e-16
Alignment gi|XP_003126321.1| PREDICTED: lens fiber major intrinsic protei... 80 2e-15
Alignment gi|NP_999619.1| aquaporin-1 [Sus scrofa]. 79 6e-15
>ref|XP_003357769.1| PREDICTED: aquaporin-3-like [Sus scrofa].
Length = 290
Score = 593 bits (1530), Expect = e-170
Identities = 290/290 (100%), Positives = 290/290 (100%)
Frame = +2
Query: 59 MGRQKELVTRCGEMLHIRYRLLRQALAECLGTLILVMFGCGSVAQVVLSRGTHGGFLTIN 238
MGRQKELVTRCGEMLHIRYRLLRQALAECLGTLILVMFGCGSVAQVVLSRGTHGGFLTIN
Sbjct: 1 MGRQKELVTRCGEMLHIRYRLLRQALAECLGTLILVMFGCGSVAQVVLSRGTHGGFLTIN 60
Query: 239 LAFGFAVTLGILVAGQVSGAHLNPAVTFAMCFLAREPWIKLPVYTLAQTLGAFLGAGIIF 418
LAFGFAVTLGILVAGQVSGAHLNPAVTFAMCFLAREPWIKLPVYTLAQTLGAFLGAGIIF
Sbjct: 61 LAFGFAVTLGILVAGQVSGAHLNPAVTFAMCFLAREPWIKLPVYTLAQTLGAFLGAGIIF 120
Query: 419 GLYYDAIWAFANNQLIVSGPNGTAGIFATYPSGHLDMVNGFFDQFIGTASLIVCVLAIVD 598
GLYYDAIWAFANNQLIVSGPNGTAGIFATYPSGHLDMVNGFFDQFIGTASLIVCVLAIVD
Sbjct: 121 GLYYDAIWAFANNQLIVSGPNGTAGIFATYPSGHLDMVNGFFDQFIGTASLIVCVLAIVD 180
Query: 599 PNNNPVPRGLEAFTVGLVVLVIGTSMGFNSGYAVNPARDFGPRLFTAIAGWGSEVFTTGR 778
PNNNPVPRGLEAFTVGLVVLVIGTSMGFNSGYAVNPARDFGPRLFTAIAGWGSEVFTTGR
Sbjct: 181 PNNNPVPRGLEAFTVGLVVLVIGTSMGFNSGYAVNPARDFGPRLFTAIAGWGSEVFTTGR 240
Query: 779 HWWWVPIVSPLLGSIAGVFVYQLMIGCHLEPPPPSTDEENVKLSQVKHKE 928
HWWWVPIVSPLLGSIAGVFVYQLMIGCHLEPPPPSTDEENVKLSQVKHKE
Sbjct: 241 HWWWVPIVSPLLGSIAGVFVYQLMIGCHLEPPPPSTDEENVKLSQVKHKE 290
>ref|NP_001103642.1| aquaporin-3 [Sus scrofa].
Length = 290
Score = 593 bits (1530), Expect = e-170
Identities = 290/290 (100%), Positives = 290/290 (100%)
Frame = +2
Query: 59 MGRQKELVTRCGEMLHIRYRLLRQALAECLGTLILVMFGCGSVAQVVLSRGTHGGFLTIN 238
MGRQKELVTRCGEMLHIRYRLLRQALAECLGTLILVMFGCGSVAQVVLSRGTHGGFLTIN
Sbjct: 1 MGRQKELVTRCGEMLHIRYRLLRQALAECLGTLILVMFGCGSVAQVVLSRGTHGGFLTIN 60
Query: 239 LAFGFAVTLGILVAGQVSGAHLNPAVTFAMCFLAREPWIKLPVYTLAQTLGAFLGAGIIF 418
LAFGFAVTLGILVAGQVSGAHLNPAVTFAMCFLAREPWIKLPVYTLAQTLGAFLGAGIIF
Sbjct: 61 LAFGFAVTLGILVAGQVSGAHLNPAVTFAMCFLAREPWIKLPVYTLAQTLGAFLGAGIIF 120
Query: 419 GLYYDAIWAFANNQLIVSGPNGTAGIFATYPSGHLDMVNGFFDQFIGTASLIVCVLAIVD 598
GLYYDAIWAFANNQLIVSGPNGTAGIFATYPSGHLDMVNGFFDQFIGTASLIVCVLAIVD
Sbjct: 121 GLYYDAIWAFANNQLIVSGPNGTAGIFATYPSGHLDMVNGFFDQFIGTASLIVCVLAIVD 180
Query: 599 PNNNPVPRGLEAFTVGLVVLVIGTSMGFNSGYAVNPARDFGPRLFTAIAGWGSEVFTTGR 778
PNNNPVPRGLEAFTVGLVVLVIGTSMGFNSGYAVNPARDFGPRLFTAIAGWGSEVFTTGR
Sbjct: 181 PNNNPVPRGLEAFTVGLVVLVIGTSMGFNSGYAVNPARDFGPRLFTAIAGWGSEVFTTGR 240
Query: 779 HWWWVPIVSPLLGSIAGVFVYQLMIGCHLEPPPPSTDEENVKLSQVKHKE 928
HWWWVPIVSPLLGSIAGVFVYQLMIGCHLEPPPPSTDEENVKLSQVKHKE
Sbjct: 241 HWWWVPIVSPLLGSIAGVFVYQLMIGCHLEPPPPSTDEENVKLSQVKHKE 290
>ref|NP_001106154.1| aquaporin-9 [Sus scrofa].
Length = 295
Score = 291 bits (745), Expect = 4e-79
Identities = 137/267 (51%), Positives = 183/267 (68%)
Frame = +2
Query: 95 EMLHIRYRLLRQALAECLGTLILVMFGCGSVAQVVLSRGTHGGFLTINLAFGFAVTLGIL 274
+ L ++ L ++ L+E LGT I+++ GCGSVAQ VLSRG GG LTIN+ F AV + I
Sbjct: 14 QRLVLKNSLAKEMLSEFLGTFIMIVLGCGSVAQAVLSRGHFGGILTINIGFPMAVVMAIY 73
Query: 275 VAGQVSGAHLNPAVTFAMCFLAREPWIKLPVYTLAQTLGAFLGAGIIFGLYYDAIWAFAN 454
G VSG H+NPAV+FA+C R W KLP Y AQ LGAF GA +FG+YYDA+ +FA+
Sbjct: 74 ATGGVSGGHINPAVSFALCLFGRMKWSKLPFYMGAQFLGAFAGAATLFGIYYDALMSFAD 133
Query: 455 NQLIVSGPNGTAGIFATYPSGHLDMVNGFFDQFIGTASLIVCVLAIVDPNNNPVPRGLEA 634
+L+++G N TA IFATYP+ +L ++N F DQ + T L++ V A+ D N VPRGL+
Sbjct: 134 GKLLITGENATAQIFATYPAPYLSLINAFADQVVATMFLLIIVFAVFDSRNLGVPRGLQP 193
Query: 635 FTVGLVVLVIGTSMGFNSGYAVNPARDFGPRLFTAIAGWGSEVFTTGRHWWWVPIVSPLL 814
+GL+++VI +S+G NSG A+NPARD PRLFTA+AGWG EVFT G ++WW+P+V PL+
Sbjct: 194 IVIGLLIVVIASSLGMNSGCAMNPARDLSPRLFTALAGWGFEVFTAGNNFWWIPVVGPLV 253
Query: 815 GSIAGVFVYQLMIGCHLEPPPPSTDEE 895
G G VY L I H P P + E
Sbjct: 254 GGAIGGLVYVLFIEIHHSYPNPHFEVE 280
>ref|NP_001121926.1| aquaporin-10 [Sus scrofa].
Length = 301
Score = 278 bits (712), Expect = 3e-75
Identities = 138/278 (49%), Positives = 173/278 (62%)
Frame = +2
Query: 95 EMLHIRYRLLRQALAECLGTLILVMFGCGSVAQVVLSRGTHGGFLTINLAFGFAVTLGIL 274
E L IR L+RQ LAE LG +L++F GSVAQ V S T G F T+ LA V L I
Sbjct: 12 ERLRIRNLLVRQCLAEFLGVFVLMLFTQGSVAQAVTSGETKGNFFTMFLAGALGVILAIY 71
Query: 275 VAGQVSGAHLNPAVTFAMCFLAREPWIKLPVYTLAQTLGAFLGAGIIFGLYYDAIWAFAN 454
V G VSG HLNPA + AMC L R PW K P+Y+L Q + AF + + + LYYDA+ +
Sbjct: 72 VGGNVSGGHLNPAFSLAMCLLGRFPWAKFPIYSLVQLVSAFCASAVTYALYYDALQNYTG 131
Query: 455 NQLIVSGPNGTAGIFATYPSGHLDMVNGFFDQFIGTASLIVCVLAIVDPNNNPVPRGLEA 634
L V+GP TA IFATYP+ +L + NG DQ +GT L+V + AI+D N VP GLE
Sbjct: 132 GNLTVTGPKETASIFATYPAPYLSLSNGILDQVLGTWLLMVGISAILDTRNKGVPAGLEP 191
Query: 635 FTVGLVVLVIGTSMGFNSGYAVNPARDFGPRLFTAIAGWGSEVFTTGRHWWWVPIVSPLL 814
VGL++L IG SMG N GY +NPARD GPRLFT +AGWG EVF+ G WWWVP+V PL+
Sbjct: 192 VVVGLLILAIGLSMGVNCGYPMNPARDLGPRLFTYVAGWGPEVFSAGNGWWWVPVVCPLV 251
Query: 815 GSIAGVFVYQLMIGCHLEPPPPSTDEENVKLSQVKHKE 928
G+ G YQL++ H + E N +V +E
Sbjct: 252 GAALGTATYQLLVALHHTEDSETAQEVNCAQPEVSARE 289
>ref|NP_001106909.1| aquaporin-7 [Sus scrofa].
Length = 328
Score = 263 bits (671), Expect = 2e-70
Identities = 125/257 (48%), Positives = 171/257 (66%)
Frame = +2
Query: 107 IRYRLLRQALAECLGTLILVMFGCGSVAQVVLSRGTHGGFLTINLAFGFAVTLGILVAGQ 286
+R ++R+ LAE + T ++++FG GSVA +VL G +L +NL FGF VT+G+ VAG
Sbjct: 32 MRKEMVREFLAEFMSTFVMMVFGLGSVAHMVLG-DKMGSYLGVNLGFGFGVTMGVHVAGN 90
Query: 287 VSGAHLNPAVTFAMCFLAREPWIKLPVYTLAQTLGAFLGAGIIFGLYYDAIWAFANNQLI 466
+SGAH+N AVTF C + R W K PVY L Q LG+FL A ++ L+Y AI F+ +L
Sbjct: 91 ISGAHMNAAVTFTNCAIGRMSWKKFPVYVLGQFLGSFLAAATVYCLFYGAIMEFSEGKLT 150
Query: 467 VSGPNGTAGIFATYPSGHLDMVNGFFDQFIGTASLIVCVLAIVDPNNNPVPRGLEAFTVG 646
V+GP TA IFATY H+ + GF D+ I T L +C+LAI D NNP +G +A +G
Sbjct: 151 VTGPTATANIFATYLPQHMTLWRGFLDEVIVTGMLQLCLLAITDKENNPALQGTQAVVIG 210
Query: 647 LVVLVIGTSMGFNSGYAVNPARDFGPRLFTAIAGWGSEVFTTGRHWWWVPIVSPLLGSIA 826
++V++IG SMG NSGYA+NP+RD PR FT IAGWG++VF+ G WWWVP+V+P LG+
Sbjct: 211 ILVVIIGASMGMNSGYAINPSRDLPPRFFTFIAGWGTQVFSAG-DWWWVPVVAPPLGAYL 269
Query: 827 GVFVYQLMIGCHLEPPP 877
G +Y + IG P
Sbjct: 270 GAIIYLVFIGSSTRQEP 286
>ref|XP_003360797.1| PREDICTED: aquaporin-10-like, partial [Sus scrofa].
Length = 266
Score = 243 bits (621), Expect = 1e-64
Identities = 117/221 (52%), Positives = 144/221 (65%)
Frame = +2
Query: 167 MFGCGSVAQVVLSRGTHGGFLTINLAFGFAVTLGILVAGQVSGAHLNPAVTFAMCFLARE 346
+F GSVAQ V S T G F T+ LA V L I V G VSG HLNPA + AMC L R
Sbjct: 1 LFTQGSVAQAVTSGETKGNFFTMFLAGALGVILAIYVGGNVSGGHLNPAFSLAMCLLGRF 60
Query: 347 PWIKLPVYTLAQTLGAFLGAGIIFGLYYDAIWAFANNQLIVSGPNGTAGIFATYPSGHLD 526
PW K P+Y+L Q + AF + + + LYYDA+ + L V+GP TA IFATYP+ +L
Sbjct: 61 PWAKFPIYSLVQLVSAFCASAVTYALYYDALQNYTGGNLTVTGPKETASIFATYPAPYLS 120
Query: 527 MVNGFFDQFIGTASLIVCVLAIVDPNNNPVPRGLEAFTVGLVVLVIGTSMGFNSGYAVNP 706
+ NG DQ +GT L+V + AI+D N VP GLE VGL++L IG SMG N GY +NP
Sbjct: 121 LSNGILDQVLGTWLLMVGISAILDTRNKGVPAGLEPVVVGLLILAIGLSMGVNCGYPMNP 180
Query: 707 ARDFGPRLFTAIAGWGSEVFTTGRHWWWVPIVSPLLGSIAG 829
ARD GPRLFT +AGWG EVF+ G WWWVP+V PL+G+ G
Sbjct: 181 ARDLGPRLFTYVAGWGPEVFSAGNGWWWVPVVCPLVGAALG 221
>ref|NP_001103893.1| aquaporin-4 [Sus scrofa].
Length = 301
Score = 84.0 bits (206), Expect = 1e-16
Identities = 68/238 (28%), Positives = 104/238 (43%), Gaps = 2/238 (0%)
Frame = +2
Query: 137 AECLGTLILVMFGCGSVAQVV-LSRGTHGGFLTINLAFGFAVTLGILVAGQVSGAHLNPA 313
AE L LI V+ GS + + I+L FG ++ + G +SG H+NPA
Sbjct: 18 AEFLAMLIFVLLSLGSTINWGGAEKPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPA 77
Query: 314 VTFAMCFLAREPWIKLPVYTLAQTLGAFLGAGIIFGLYYDAIWAFANNQLIVSGPNGTAG 493
VT AM + K Y AQ LGA +GAGI++ +V+ P+ G
Sbjct: 78 VTVAMVCTRKISIAKSVFYIAAQCLGAIIGAGILY---------------LVTPPSVVGG 122
Query: 494 IFATYPSGHLDMVNGFFDQFIGTASLIVCVLAIVDPNNNPVPRGLEAFTVGLVVLVIGTS 673
+ T G+L +G + I T L+ + A D V G A +G V IG
Sbjct: 123 LGVTTVHGNLSAGHGLLVELIITFQLVFTIFASCDSKRTDV-TGSIALAIGFSV-AIGHL 180
Query: 674 MGFN-SGYAVNPARDFGPRLFTAIAGWGSEVFTTGRHWWWVPIVSPLLGSIAGVFVYQ 844
N +G ++NPAR FGP + + W + W+ V P++G++ +Y+
Sbjct: 181 FAINYTGASMNPARSFGPAVI--MGNWENH---------WIYWVGPIIGAVLAGGLYE 227
>ref|NP_001103894.1| aquaporin-5 [Sus scrofa].
Length = 265
Score = 83.2 bits (204), Expect = 2e-16
Identities = 76/241 (31%), Positives = 110/241 (45%), Gaps = 1/241 (0%)
Frame = +2
Query: 122 LRQALAECLGTLILVMFGCGSVAQVVLSRGTHGGFLTINLAFGFAVTLGILVAGQVSGAH 301
L+ AE L TLI V FG S + + T L I LAFG A+ G VSG H
Sbjct: 11 LKAVFAEFLATLIFVFFGLASALKWPSALPT---ILQIALAFGLAIGTLAQALGPVSGGH 67
Query: 302 LNPAVTFAMCFLAREPWIKLPVYTLAQTLGAFLGAGIIFGLYYDAIWAFANNQLIVSGPN 481
+NPA+T A+ + ++ Y +AQ +GA GAGI++GL A L V+ N
Sbjct: 68 INPAITLALLVGNQISLLRAVFYVVAQLVGAIAGAGILYGL----APGNARGNLAVNSLN 123
Query: 482 GTAGIFATYPSGHLDMVNGFFDQFIGTASLIVCVLAIVDPNNNPVPRGLEAFTVGLVVLV 661
T P G +V + I T L +C+ + D + P G A ++GL V
Sbjct: 124 NN-----TTP-GQAVVV-----EMILTFQLALCIFSSTD-SRRTSPVGSPALSIGLSV-T 170
Query: 662 IGTSMG-FNSGYAVNPARDFGPRLFTAIAGWGSEVFTTGRHWWWVPIVSPLLGSIAGVFV 838
+G +G + +G ++NPAR FGP + V WV V P++G+ +
Sbjct: 171 LGHLVGIYFTGCSMNPARSFGPAV----------VMNRFSPSHWVFWVGPIVGAAVAAIL 220
Query: 839 Y 841
Y
Sbjct: 221 Y 221
>ref|XP_003126321.1| PREDICTED: lens fiber major intrinsic protein-like [Sus scrofa].
Length = 263
Score = 80.1 bits (196), Expect = 2e-15
Identities = 74/250 (29%), Positives = 106/250 (42%), Gaps = 7/250 (2%)
Frame = +2
Query: 125 RQALAECLGTLILVMFGCGSVAQVVLSRGTHGGF--LTINLAFGFAVTLGILVAGQVSGA 298
R AE TL V FG G+ R T G L + LAFG A+ + G +SGA
Sbjct: 11 RAIFAEFFATLFYVFFGLGASL-----RWTPGPLHVLQVALAFGLALATLVQAVGHISGA 65
Query: 299 HLNPAVTFAMCFLAREPWIKLPVYTLAQTLGAFLGAGIIFGLYYDAIWAFANNQLIVSGP 478
H+NPAVTFA ++ + Y AQ LGA GA +++ + A+
Sbjct: 66 HVNPAVTFAFLVGSQMSLFRAFCYMAAQLLGAVAGAAVLYSVTPPAV------------- 112
Query: 479 NGTAGIFATYPS---GHLDMVNGFFDQFIGTASLIVCVLAIVDPNNNPVPRGLEAFTVGL 649
G + +P G +V F T ++C+ A D N G A VG
Sbjct: 113 RGNLALNTLHPGVSVGQATIVEIFL-----TLQFVLCIFATYDERRNG-RLGSVALAVGF 166
Query: 650 VVLVIGTSMG-FNSGYAVNPARDFGPRLFTAIAGWGSEVFTTGRHW-WWVPIVSPLLGSI 823
L +G G + +G +NPAR F P + T FT HW +W V P++G+
Sbjct: 167 -SLTLGHLFGMYYTGAGMNPARSFAPAILT-------RSFT--NHWVYW---VGPIIGAG 213
Query: 824 AGVFVYQLMI 853
G +Y ++
Sbjct: 214 LGSLLYDFLL 223
>ref|NP_999619.1| aquaporin-1 [Sus scrofa].
Length = 271
Score = 78.6 bits (192), Expect = 6e-15
Identities = 67/250 (26%), Positives = 105/250 (42%), Gaps = 7/250 (2%)
Frame = +2
Query: 125 RQALAECLGTLILVMFGCGSVAQV---VLSRGTHGGF---LTINLAFGFAVTLGILVAGQ 286
R +AE L + + GS V + T G + ++LAFG ++ G
Sbjct: 12 RAVVAEFLAMTLFIFISIGSALGFQYPVRNNQTSGAAQDNVKVSLAFGLSIATLAQSVGH 71
Query: 287 VSGAHLNPAVTFAMCFLAREPWIKLPVYTLAQTLGAFLGAGIIFGLYYDAIWAFANNQLI 466
+SGAHLNPAVT + + ++ +Y +AQ +GA + I+ G +
Sbjct: 72 ISGAHLNPAVTLGLLLSCQISVLRAVMYIIAQCVGAIVATAILSG-------------IT 118
Query: 467 VSGPNGTAGIFATYPSGHLDMVNGFFDQFIGTASLIVCVLAIVDPNNNPVPRGLEAFTVG 646
S P + G+ + P +D G + IGT L++CVLA D + G +G
Sbjct: 119 SSLPGNSLGLNSLAPG--VDSGQGLGIEIIGTLQLVLCVLATTDRRRRDL-GGSAPLAIG 175
Query: 647 LVVLVIGTSMGFN-SGYAVNPARDFGPRLFTAIAGWGSEVFTTGRHWWWVPIVSPLLGSI 823
V +G + + +G +NPAR F GS V T WV V P +G
Sbjct: 176 FSV-ALGHLLAIDYTGCGINPARSF-----------GSAVITHNFQDHWVFWVGPFIGGA 223
Query: 824 AGVFVYQLMI 853
V +Y ++
Sbjct: 224 LAVLIYDFIL 233
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 30,578,312
Number of extensions: 1005959
Number of successful extensions: 4163
Number of sequences better than 1.0e-05: 14
Number of HSP's gapped: 4121
Number of HSP's successfully gapped: 14
Length of query: 365
Length of database: 11,343,932
Length adjustment: 100
Effective length of query: 265
Effective length of database: 8,854,232
Effective search space: 2346371480
Effective search space used: 2346371480
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007253
(1096 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr10 525 e-146
>Sscrofa_Chr10
|| Length = 79102373
Score = 525 bits (265), Expect = e-146
Identities = 315/330 (95%), Gaps = 3/330 (0%)
Strand = Plus / Plus
Query: 769 gaccggccgccactggtggtgggtgcccattgtctctccgctcctgggttccatcgccgg 828
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37312365 gaccggccgccactggtggtgggtgcccattgtctctccgctcctgggttccatcgccgg 37312424
Query: 829 tgtcttcgtgtaccagctcatgatcggctgccacctggagccaccgccaccctccactga 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37312425 tgtcttcgtgtaccagctcatgatcggctgccacctggagccaccgccaccctccactga 37312484
Query: 889 cgaggagaatgtgaagctgtcccaagtaaagcacaaggagtagatgcgaatgggcaggag 948
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37312485 cgaggagaatgtgaagctgtcccaagtaaagcacaaggagtagatgcgaatgggcaggag 37312544
Query: 949 gcannnnnnnnactg-ccccttccttgagcatccattgactgtgcgggggctgctccctt 1007
||| |||| ||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 37312545 gca-cccccccactgccccctcccttgagcatccattgactgtgcgggggctgctccctt 37312603
Query: 1008 gaaccccccttgaa-cccccttgctgactcctctcccgggttaagaaactcctaccggca 1066
||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 37312604 gaagcccccttgaagcccccttgctgactcctctcccgggttaagaaactcctaccgcca 37312663
Query: 1067 ccccctcagacaggccccttggagattttc 1096
|||| ||||||||||||||||||||||||
Sbjct: 37312664 cccctccagacaggccccttggagattttc 37312693
Score = 442 bits (223), Expect = e-121
Identities = 223/223 (100%)
Strand = Plus / Plus
Query: 547 ccagttcatcggcacagcctccctcatcgtgtgcgtgctggccattgtggaccccaacaa 606
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37312057 ccagttcatcggcacagcctccctcatcgtgtgcgtgctggccattgtggaccccaacaa 37312116
Query: 607 caaccccgtgccccgtggcctggaggccttcactgtgggcctggtggtcctggtcattgg 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37312117 caaccccgtgccccgtggcctggaggccttcactgtgggcctggtggtcctggtcattgg 37312176
Query: 667 cacctccatgggcttcaactctggctatgccgtcaaccctgcccgggacttcggccctcg 726
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37312177 cacctccatgggcttcaactctggctatgccgtcaaccctgcccgggacttcggccctcg 37312236
Query: 727 cctcttcactgccattgctggctggggctcagaagtcttcacg 769
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37312237 cctcttcactgccattgctggctggggctcagaagtcttcacg 37312279
Score = 327 bits (165), Expect = 7e-87
Identities = 165/165 (100%)
Strand = Plus / Plus
Query: 2 actgctgccgcgcctgacgccacccgccttctgacagcgccgccgcctgcccctgccatg 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37307576 actgctgccgcgcctgacgccacccgccttctgacagcgccgccgcctgcccctgccatg 37307635
Query: 62 ggtcgacagaaggagctggtgacccgctgcggggagatgctccatatccgctaccggctg 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37307636 ggtcgacagaaggagctggtgacccgctgcggggagatgctccatatccgctaccggctg 37307695
Query: 122 cttcgccaggcactggctgagtgcctggggacccttatcctcgtg 166
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37307696 cttcgccaggcactggctgagtgcctggggacccttatcctcgtg 37307740
Score = 276 bits (139), Expect = 2e-71
Identities = 139/139 (100%)
Strand = Plus / Plus
Query: 293 ggggcccacctgaaccctgctgtgaccttcgctatgtgcttcctggcccgtgaaccctgg 352
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37311274 ggggcccacctgaaccctgctgtgaccttcgctatgtgcttcctggcccgtgaaccctgg 37311333
Query: 353 atcaagctgcccgtctataccctggctcagactctgggagccttcctgggtgctgggatc 412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37311334 atcaagctgcccgtctataccctggctcagactctgggagccttcctgggtgctgggatc 37311393
Query: 413 atttttgggctgtattatg 431
|||||||||||||||||||
Sbjct: 37311394 atttttgggctgtattatg 37311412
Score = 256 bits (129), Expect = 2e-65
Identities = 129/129 (100%)
Strand = Plus / Plus
Query: 166 gatgtttggctgtggctccgtggcacaggtcgtgctcagccggggcactcatggtggttt 225
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37310781 gatgtttggctgtggctccgtggcacaggtcgtgctcagccggggcactcatggtggttt 37310840
Query: 226 cctcaccatcaacctggcctttggcttcgctgtcaccctgggtatccttgttgccggcca 285
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37310841 cctcaccatcaacctggcctttggcttcgctgtcaccctgggtatccttgttgccggcca 37310900
Query: 286 ggtctctgg 294
|||||||||
Sbjct: 37310901 ggtctctgg 37310909
Score = 238 bits (120), Expect = 5e-60
Identities = 120/120 (100%)
Strand = Plus / Plus
Query: 431 gatgcaatctgggccttcgccaacaaccagcttatagtctcaggccccaatggcacagct 490
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37311740 gatgcaatctgggccttcgccaacaaccagcttatagtctcaggccccaatggcacagct 37311799
Query: 491 ggcatctttgccacctacccctctggacacttggacatggtcaatggcttcttcgaccag 550
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37311800 ggcatctttgccacctacccctctggacacttggacatggtcaatggcttcttcgaccag 37311859
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 27,224,093
Number of extensions: 118
Number of successful extensions: 118
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 117
Number of HSP's successfully gapped: 7
Length of query: 1096
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1075
Effective length of database: 2,808,413,156
Effective search space: 3019044142700
Effective search space used: 3019044142700
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)