Animal-Genome cDNA 20110601C-007263


Search to RefSeqBP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-007263
         (1454 letters)

Database: RefSeq49_BP.fasta 
           33,088 sequences; 17,681,374 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001068926.1| 3-hydroxyanthranilate 3,4-dioxygenase [Bos t...   546   e-155
Alignment   gi|XP_001254361.2| PREDICTED: 3-hydroxyanthranilate 3,4-dioxyge...   437   e-122

>ref|NP_001068926.1| 3-hydroxyanthranilate 3,4-dioxygenase [Bos taurus].
          Length = 286

 Score =  546 bits (1406), Expect = e-155
 Identities = 266/286 (93%), Positives = 274/286 (95%)
 Frame = +1

Query: 67  MERPVRVKAWVEENRASFLPPVCNKLLHQKQLKIMFVGGPNTRKDYHIEEGEEVFYQLEG 246
           MERPVRVKAWVEENR SFLPPVCNKLLHQKQLKIMFVGGPNTRKDYHIEEGEEVFYQLEG
Sbjct: 1   MERPVRVKAWVEENRGSFLPPVCNKLLHQKQLKIMFVGGPNTRKDYHIEEGEEVFYQLEG 60

Query: 247 DMLLRVLERGEHRDVVIRQGEIFLLPAGVPHSPQRFANTVGLVIERRRLKTELDGLRYYI 426
           DMLLRVLERG+HRDVVIRQGEIFLLPAGVPHSPQRFANTVGLVIERRRLKTELDGLRYY+
Sbjct: 61  DMLLRVLERGKHRDVVIRQGEIFLLPAGVPHSPQRFANTVGLVIERRRLKTELDGLRYYV 120

Query: 427 GDTTDVLFEKWFYCEDLGTQLAPIIQEFFSSEQHRTGKPNPDQLLKEPPFPLSTRSVMEP 606
           GDTTDVLFEKWFYCEDLGTQLAPIIQEFFSSEQ+RTGKPNPDQLLKEPPFPLSTRSVMEP
Sbjct: 121 GDTTDVLFEKWFYCEDLGTQLAPIIQEFFSSEQYRTGKPNPDQLLKEPPFPLSTRSVMEP 180

Query: 607 MSLEAWLAGHRKELQAGTPLSLFGDTYETQVIVHGQGSSKGPRQDVDVWLWQLEGSSVVT 786
           M LEAWL GHRKELQAGTPLSLFGDTYE+QV+VHGQGSS+G R+DVDVWLWQLEGSSVVT
Sbjct: 181 MCLEAWLDGHRKELQAGTPLSLFGDTYESQVMVHGQGSSEGLRRDVDVWLWQLEGSSVVT 240

Query: 787 MEGEHLSLTPGDSLLVPAGTAYGWERGQGSAALSVTQDPTRKKPLG 924
           MEG+ LSLT  DSLLVPAGT YGWERGQGS ALSVTQDP  KK LG
Sbjct: 241 MEGQRLSLTLDDSLLVPAGTLYGWERGQGSVALSVTQDPACKKSLG 286


>ref|XP_001254361.2| PREDICTED: 3-hydroxyanthranilate 3,4-dioxygenase-like, partial [Bos
           taurus].
          Length = 233

 Score =  437 bits (1124), Expect = e-122
 Identities = 214/233 (91%), Positives = 222/233 (95%)
 Frame = +1

Query: 226 VFYQLEGDMLLRVLERGEHRDVVIRQGEIFLLPAGVPHSPQRFANTVGLVIERRRLKTEL 405
           VFYQLEGDMLLRVLERG+HRDVVIRQGEIFLLPAGVPHSPQRFANTVGLVIERRRLKTEL
Sbjct: 1   VFYQLEGDMLLRVLERGKHRDVVIRQGEIFLLPAGVPHSPQRFANTVGLVIERRRLKTEL 60

Query: 406 DGLRYYIGDTTDVLFEKWFYCEDLGTQLAPIIQEFFSSEQHRTGKPNPDQLLKEPPFPLS 585
           DGLRYY+GDTTDVLFEKWFYCEDLGTQLAPIIQEFFSSEQ+RTGKPNPDQLLKEPPFPLS
Sbjct: 61  DGLRYYVGDTTDVLFEKWFYCEDLGTQLAPIIQEFFSSEQYRTGKPNPDQLLKEPPFPLS 120

Query: 586 TRSVMEPMSLEAWLAGHRKELQAGTPLSLFGDTYETQVIVHGQGSSKGPRQDVDVWLWQL 765
           TRSVMEPM LEAWL GHRKELQAGTPLSLFGDTYE+QV+VHGQGSS+G R+DVDVWLWQL
Sbjct: 121 TRSVMEPMCLEAWLDGHRKELQAGTPLSLFGDTYESQVMVHGQGSSEGLRRDVDVWLWQL 180

Query: 766 EGSSVVTMEGEHLSLTPGDSLLVPAGTAYGWERGQGSAALSVTQDPTRKKPLG 924
           EGSSVVTMEG+ LSLT  DSLLVPAGT YGWERGQGS ALSVTQDP  KK LG
Sbjct: 181 EGSSVVTMEGQRLSLTLDDSLLVPAGTLYGWERGQGSVALSVTQDPACKKSLG 233


  Database: RefSeq49_BP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 17,681,374
  Number of sequences in database:  33,088
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 71,790,639
Number of extensions: 2620875
Number of successful extensions: 11950
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 11808
Number of HSP's successfully gapped: 2
Length of query: 484
Length of database: 17,681,374
Length adjustment: 106
Effective length of query: 378
Effective length of database: 14,174,046
Effective search space: 5357789388
Effective search space used: 5357789388
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

Search to RefSeqCP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-007263
         (1454 letters)

Database: RefSeq49_CP.fasta 
           33,336 sequences; 18,874,504 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_854526.1| PREDICTED: similar to 3-hydroxyanthranilate 3,4...   481   e-136

>ref|XP_854526.1| PREDICTED: similar to 3-hydroxyanthranilate 3,4-dioxygenase (3-HAO)
           (3-hydroxyanthranilic acid dioxygenase)
           (3-hydroxyanthranilate oxygenase) [Canis familiaris].
          Length = 421

 Score =  481 bits (1238), Expect = e-136
 Identities = 230/259 (88%), Positives = 244/259 (94%)
 Frame = +1

Query: 148 HQKQLKIMFVGGPNTRKDYHIEEGEEVFYQLEGDMLLRVLERGEHRDVVIRQGEIFLLPA 327
           HQKQLK+MF+GGPN RKDYHIEEGEEVFYQLEGDM+LRVLERG+HRDV IRQGEIFLLPA
Sbjct: 163 HQKQLKVMFIGGPNIRKDYHIEEGEEVFYQLEGDMVLRVLERGQHRDVTIRQGEIFLLPA 222

Query: 328 GVPHSPQRFANTVGLVIERRRLKTELDGLRYYIGDTTDVLFEKWFYCEDLGTQLAPIIQE 507
           GVPHSPQRFA+TVGLVIERRRL+TELDGLRYY+GDT DVLFEKWFYCEDLGTQLAPIIQE
Sbjct: 223 GVPHSPQRFADTVGLVIERRRLETELDGLRYYVGDTMDVLFEKWFYCEDLGTQLAPIIQE 282

Query: 508 FFSSEQHRTGKPNPDQLLKEPPFPLSTRSVMEPMSLEAWLAGHRKELQAGTPLSLFGDTY 687
           FFSSEQH+TGKP PDQLLKEPPFPLSTRSVMEPMSLEAWL GHR++LQAGTPLSLFGD Y
Sbjct: 283 FFSSEQHKTGKPIPDQLLKEPPFPLSTRSVMEPMSLEAWLDGHRRQLQAGTPLSLFGDNY 342

Query: 688 ETQVIVHGQGSSKGPRQDVDVWLWQLEGSSVVTMEGEHLSLTPGDSLLVPAGTAYGWERG 867
           ETQVIVHGQGSSK P QDVDVWLWQLEGSS+VTM  +HLSL P DSLLVPAG AY WERG
Sbjct: 343 ETQVIVHGQGSSKHPGQDVDVWLWQLEGSSMVTMGEQHLSLAPDDSLLVPAGNAYAWERG 402

Query: 868 QGSAALSVTQDPTRKKPLG 924
           +GS AL+VTQDPTRKKPLG
Sbjct: 403 RGSVALAVTQDPTRKKPLG 421


  Database: RefSeq49_CP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,874,504
  Number of sequences in database:  33,336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 74,589,844
Number of extensions: 2685793
Number of successful extensions: 12423
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 12220
Number of HSP's successfully gapped: 1
Length of query: 484
Length of database: 18,874,504
Length adjustment: 107
Effective length of query: 377
Effective length of database: 15,307,552
Effective search space: 5770947104
Effective search space used: 5770947104
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

Search to RefSeqHP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-007263
         (1454 letters)

Database: RefSeq49_HP.fasta 
           32,964 sequences; 18,297,164 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_036337.2| 3-hydroxyanthranilate 3,4-dioxygenase [Homo sap...   502   e-142

>ref|NP_036337.2| 3-hydroxyanthranilate 3,4-dioxygenase [Homo sapiens].
          Length = 286

 Score =  502 bits (1292), Expect = e-142
 Identities = 241/286 (84%), Positives = 263/286 (91%)
 Frame = +1

Query: 67  MERPVRVKAWVEENRASFLPPVCNKLLHQKQLKIMFVGGPNTRKDYHIEEGEEVFYQLEG 246
           MER + V+AWV+ENR SF PPVCNKL+HQ+QLK+MF+GGPNTRKDYHIEEGEEVFYQLEG
Sbjct: 1   MERRLGVRAWVKENRGSFQPPVCNKLMHQEQLKVMFIGGPNTRKDYHIEEGEEVFYQLEG 60

Query: 247 DMLLRVLERGEHRDVVIRQGEIFLLPAGVPHSPQRFANTVGLVIERRRLKTELDGLRYYI 426
           DM+LRVLE+G+HRDVVIRQGEIFLLPA VPHSPQRFANTVGLV+ERRRL+TELDGLRYY+
Sbjct: 61  DMVLRVLEQGKHRDVVIRQGEIFLLPARVPHSPQRFANTVGLVVERRRLETELDGLRYYV 120

Query: 427 GDTTDVLFEKWFYCEDLGTQLAPIIQEFFSSEQHRTGKPNPDQLLKEPPFPLSTRSVMEP 606
           GDT DVLFEKWFYC+DLGTQLAPIIQEFFSSEQ+RTGKP PDQLLKEPPFPLSTRS+MEP
Sbjct: 121 GDTMDVLFEKWFYCKDLGTQLAPIIQEFFSSEQYRTGKPIPDQLLKEPPFPLSTRSIMEP 180

Query: 607 MSLEAWLAGHRKELQAGTPLSLFGDTYETQVIVHGQGSSKGPRQDVDVWLWQLEGSSVVT 786
           MSL+AWL  H +ELQAGTPLSLFGDTYETQVI +GQGSS+G RQ+VDVWLWQLEGSSVVT
Sbjct: 181 MSLDAWLDSHHRELQAGTPLSLFGDTYETQVIAYGQGSSEGLRQNVDVWLWQLEGSSVVT 240

Query: 787 MEGEHLSLTPGDSLLVPAGTAYGWERGQGSAALSVTQDPTRKKPLG 924
           M G  LSL P DSLLV AGT+Y WER QGS ALSVTQDP  KKPLG
Sbjct: 241 MGGRRLSLAPDDSLLVLAGTSYAWERTQGSVALSVTQDPACKKPLG 286


  Database: RefSeq49_HP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,297,164
  Number of sequences in database:  32,964
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 73,029,375
Number of extensions: 2620017
Number of successful extensions: 11439
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 11294
Number of HSP's successfully gapped: 1
Length of query: 484
Length of database: 18,297,164
Length adjustment: 106
Effective length of query: 378
Effective length of database: 14,802,980
Effective search space: 5595526440
Effective search space used: 5595526440
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

Search to RefSeqMP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-007263
         (1454 letters)

Database: RefSeq49_MP.fasta 
           30,036 sequences; 15,617,559 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_079601.1| 3-hydroxyanthranilate 3,4-dioxygenase [Mus musc...   501   e-142

>ref|NP_079601.1| 3-hydroxyanthranilate 3,4-dioxygenase [Mus musculus].
          Length = 286

 Score =  501 bits (1290), Expect = e-142
 Identities = 240/284 (84%), Positives = 263/284 (92%)
 Frame = +1

Query: 67  MERPVRVKAWVEENRASFLPPVCNKLLHQKQLKIMFVGGPNTRKDYHIEEGEEVFYQLEG 246
           MER VRVK+WVEENRASF PPVCNKL+HQ+QLKIMFVGGPNTRKDYHIEEGEEVFYQLEG
Sbjct: 1   MERRVRVKSWVEENRASFQPPVCNKLMHQEQLKIMFVGGPNTRKDYHIEEGEEVFYQLEG 60

Query: 247 DMLLRVLERGEHRDVVIRQGEIFLLPAGVPHSPQRFANTVGLVIERRRLKTELDGLRYYI 426
           DM+LRVLE+G+HRDV IRQGEIFLLPA VPHSPQRFANT+GLVIERRRL++ELDGLRYY+
Sbjct: 61  DMILRVLEQGQHRDVPIRQGEIFLLPARVPHSPQRFANTMGLVIERRRLESELDGLRYYV 120

Query: 427 GDTTDVLFEKWFYCEDLGTQLAPIIQEFFSSEQHRTGKPNPDQLLKEPPFPLSTRSVMEP 606
           GDT DVLFEKWF+C+DLGTQLAPIIQEFF SEQ+RTGKPNPDQLLKE PFPL+TRS+M+P
Sbjct: 121 GDTEDVLFEKWFHCKDLGTQLAPIIQEFFHSEQYRTGKPNPDQLLKELPFPLNTRSIMKP 180

Query: 607 MSLEAWLAGHRKELQAGTPLSLFGDTYETQVIVHGQGSSKGPRQDVDVWLWQLEGSSVVT 786
           MSL+AWL GH +ELQAGT LSLFGD+YETQVI HGQGSSKGPRQDVDVWLWQ EGSS VT
Sbjct: 181 MSLKAWLDGHSRELQAGTSLSLFGDSYETQVIAHGQGSSKGPRQDVDVWLWQQEGSSKVT 240

Query: 787 MEGEHLSLTPGDSLLVPAGTAYGWERGQGSAALSVTQDPTRKKP 918
           M G+ ++L P DSLLVPAGT+Y WER QGS ALSVTQDP RKKP
Sbjct: 241 MGGQCIALAPDDSLLVPAGTSYVWERAQGSVALSVTQDPARKKP 284


  Database: RefSeq49_MP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 15,617,559
  Number of sequences in database:  30,036
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 61,240,622
Number of extensions: 2146422
Number of successful extensions: 9159
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 9048
Number of HSP's successfully gapped: 1
Length of query: 484
Length of database: 15,617,559
Length adjustment: 105
Effective length of query: 379
Effective length of database: 12,463,779
Effective search space: 4723772241
Effective search space used: 4723772241
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

Search to RefSeqSP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-007263
         (1454 letters)

Database: RefSeq49_SP.fasta 
           24,897 sequences; 11,343,932 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_003125241.1| PREDICTED: LOW QUALITY PROTEIN: 3-hydroxyant...   579   e-165

>ref|XP_003125241.1| PREDICTED: LOW QUALITY PROTEIN: 3-hydroxyanthranilate
           3,4-dioxygenase-like [Sus scrofa].
          Length = 287

 Score =  579 bits (1492), Expect = e-165
 Identities = 284/287 (98%), Positives = 284/287 (98%), Gaps = 1/287 (0%)
 Frame = +1

Query: 67  MERPVRVKAWVEENRASFLPPVCNKLLHQKQLKIMFVGGPNTRKDYHIEEGEEVFYQLEG 246
           MERPVRVKAWVEENRASFLPPVCNKLLHQKQLKIMFVGGPNTRKDYHIEEGEEVFYQLEG
Sbjct: 1   MERPVRVKAWVEENRASFLPPVCNKLLHQKQLKIMFVGGPNTRKDYHIEEGEEVFYQLEG 60

Query: 247 DMLLRVLERGEHRDVVIRQGEIFLLPAGVPHSPQRFANTVGLVIERRRLKTELDGLRYYI 426
           DMLLRVLERGEHRDVVIRQGEIFLLPAGVPHSPQRFANTVGLVIERRRLKTELDGLRYYI
Sbjct: 61  DMLLRVLERGEHRDVVIRQGEIFLLPAGVPHSPQRFANTVGLVIERRRLKTELDGLRYYI 120

Query: 427 GDTTDVLFEKWFYCEDLGTQLAPIIQE-FFSSEQHRTGKPNPDQLLKEPPFPLSTRSVME 603
           GDTTDVLFEKWFYCEDLGTQLAPIIQE FFSSEQHRTG P PDQLLKEPPFPLSTRSVME
Sbjct: 121 GDTTDVLFEKWFYCEDLGTQLAPIIQEXFFSSEQHRTGNPTPDQLLKEPPFPLSTRSVME 180

Query: 604 PMSLEAWLAGHRKELQAGTPLSLFGDTYETQVIVHGQGSSKGPRQDVDVWLWQLEGSSVV 783
           PMSLEAWLAGHRKELQAGTPLSLFGDTYETQVIVHGQGSSKGPRQDVDVWLWQLEGSSVV
Sbjct: 181 PMSLEAWLAGHRKELQAGTPLSLFGDTYETQVIVHGQGSSKGPRQDVDVWLWQLEGSSVV 240

Query: 784 TMEGEHLSLTPGDSLLVPAGTAYGWERGQGSAALSVTQDPTRKKPLG 924
           TMEGEHLSLTPGDSLLVPAGTAYGWERGQGSAALSVTQDPTRKKPLG
Sbjct: 241 TMEGEHLSLTPGDSLLVPAGTAYGWERGQGSAALSVTQDPTRKKPLG 287


  Database: RefSeq49_SP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 11,343,932
  Number of sequences in database:  24,897
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 46,463,073
Number of extensions: 1699755
Number of successful extensions: 7810
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 7722
Number of HSP's successfully gapped: 1
Length of query: 484
Length of database: 11,343,932
Length adjustment: 103
Effective length of query: 381
Effective length of database: 8,779,541
Effective search space: 3345005121
Effective search space used: 3345005121
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

Search to Sscrofa10_2

BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-007263
         (1454 letters)

Database: Sscrofa_10.2.fasta 
           4582 sequences; 2,808,509,378 total letters

Searching..................................................done

 ***** No hits found ******


  Database: Sscrofa_10.2.fasta
    Posted date:  Nov 16, 2011 10:34 AM
  Number of letters in database: 2,808,509,378
  Number of sequences in database:  4582
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 40,070,515
Number of extensions: 291
Number of successful extensions: 291
Number of sequences better than 1.0e-05: 0
Number of HSP's gapped: 291
Number of HSP's successfully gapped: 0
Length of query: 1454
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1433
Effective length of database: 2,808,413,156
Effective search space: 4024456052548
Effective search space used: 4024456052548
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)