Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007283
(1681 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001029892.1| plastin-2 [Bos taurus]. 712 0.0
Alignment gi|NP_001039388.1| plastin-3 [Bos taurus]. 561 e-160
Alignment gi|NP_001096769.1| plastin-1 [Bos taurus]. 520 e-147
Alignment gi|XP_002697238.1| PREDICTED: dystonin [Bos taurus]. 66 8e-11
Alignment gi|XP_615341.3| PREDICTED: dystonin isoform 2 [Bos taurus]. 66 8e-11
Alignment gi|XP_002702867.1| PREDICTED: dystonin [Bos taurus]. 66 8e-11
Alignment gi|NP_001137332.1| microtubule-actin cross-linking factor 1 [Bo... 63 7e-10
Alignment gi|NP_001179205.1| spectrin beta chain, brain 1 [Bos taurus]. 56 8e-08
Alignment gi|XP_002699440.1| PREDICTED: spectrin, beta, non-erythrocytic ... 56 8e-08
Alignment gi|XP_002691372.1| PREDICTED: spectrin, beta, non-erythrocytic ... 56 8e-08
>ref|NP_001029892.1| plastin-2 [Bos taurus].
Length = 627
Score = 712 bits (1837), Expect = 0.0
Identities = 359/391 (91%), Positives = 367/391 (93%), Gaps = 1/391 (0%)
Frame = +2
Query: 446 MARGSVSDEEMMELREAFAKVDTDGNGYISCNELNDLFKAACLPLPGYRVREITENLMAT 625
MARGSVSDEEM+ELREAFAKVDTDGNGYISC+ELNDLFKAACLPLPGYRVREITENLM T
Sbjct: 1 MARGSVSDEEMLELREAFAKVDTDGNGYISCSELNDLFKAACLPLPGYRVREITENLMTT 60
Query: 626 GDLDRDGRISFDEFIKVFHGLKSTEVAKTFRKAINKKEGICAIGGTSEQSSVGTQHSYSE 805
GDLD+DG+ISFDEFIKVFHGLKSTEVAKTFRKAINKKEGICAIGGTSEQSSVGTQHSYSE
Sbjct: 61 GDLDQDGKISFDEFIKVFHGLKSTEVAKTFRKAINKKEGICAIGGTSEQSSVGTQHSYSE 120
Query: 806 EEKYAFVNWINKALENDPDCRHVIPMDPNTNDLFSAVGDGIVLCKMINLSVPDTIDERTI 985
EEKYAFVNWINKALENDPDCRHVIPMDPNTNDLFSAVG GIVLCKMINLSVPDTIDERTI
Sbjct: 121 EEKYAFVNWINKALENDPDCRHVIPMDPNTNDLFSAVGGGIVLCKMINLSVPDTIDERTI 180
Query: 986 NKKKLTPFTIQENLNLALNSASAIGCHVVNIGAEDLKEGKPYLVLGLLWQVIKIGLFADI 1165
NKKKLTPFTIQENLNLALNSASAIGCHVVNIGAEDLKEGKPYLVLGLLWQVIKIGLFADI
Sbjct: 181 NKKKLTPFTIQENLNLALNSASAIGCHVVNIGAEDLKEGKPYLVLGLLWQVIKIGLFADI 240
Query: 1166 ELSRNEALAALLREGESLEDLMKLSPEELLLRWANYHLENAGCNKINNFSSDIKDSKAYY 1345
ELSRNEALAALLREGESLEDLMKLSPEELLLRWANYHLENAGCNKINNFSSDIKDSKAYY
Sbjct: 241 ELSRNEALAALLREGESLEDLMKLSPEELLLRWANYHLENAGCNKINNFSSDIKDSKAYY 300
Query: 1346 HLLEQVAPKGDEEGIPAVVIDMSGLREKDDIQRAECMLQQAERLGCRQFVTAPMWSEGTP 1525
HLLEQVAPKGDEEGIPAVVIDMSGLREKDDIQRAECMLQQAERLGCRQFVTA G P
Sbjct: 301 HLLEQVAPKGDEEGIPAVVIDMSGLREKDDIQRAECMLQQAERLGCRQFVTATDVVRGNP 360
Query: 1526 R*TW-XXXXXXHRYPALHKPETQTSTGGLLK 1615
+ ++YPALHKPE Q G L+
Sbjct: 361 KLNLAFIANLFNKYPALHKPENQDIDWGALE 391
Score = 81.3 bits (199), Expect = 2e-15
Identities = 41/62 (66%), Positives = 47/62 (75%), Gaps = 1/62 (1%)
Frame = +1
Query: 1498 STDVVRGNPKVNLAFIATS-SQIPRPAQTRDPDIDWGALESETREERTFRNWMNSLXCXX 1674
+TDVVRGNPK+NLAFIA ++ P + + DIDWGALE ETREERTFRNWMNSL
Sbjct: 352 ATDVVRGNPKLNLAFIANLFNKYPALHKPENQDIDWGALEGETREERTFRNWMNSLGVNP 411
Query: 1675 RV 1680
RV
Sbjct: 412 RV 413
>ref|NP_001039388.1| plastin-3 [Bos taurus].
Length = 639
Score = 561 bits (1446), Expect = e-160
Identities = 283/401 (70%), Positives = 330/401 (82%), Gaps = 10/401 (2%)
Frame = +2
Query: 443 KMARGSVSDEEMMELREAFAKVDTDGNGYISCNELNDLFKAACLPLPGYRVREITENLMA 622
+MA +S +E+ EL+EAFAKVD + NG+I EL++LFK A +PLPGY+VREI + LM
Sbjct: 3 EMATTQISKDELDELKEAFAKVDLNSNGFICDYELHELFKEANMPLPGYKVREIIQKLML 62
Query: 623 TGDLDRDGRISFDEFIKVFHGLKSTEVAKTFRKAINKKEGICAIGGTSEQSSVGTQHSYS 802
GD ++DG+ISFDEF+ +F +KS+++AKTFRKAIN+KEGICA+GGTSE SS GTQHSYS
Sbjct: 63 DGDRNKDGKISFDEFVYIFQEVKSSDIAKTFRKAINRKEGICALGGTSELSSEGTQHSYS 122
Query: 803 EEEKYAFVNWINKALENDPDCRHVIPMDPNTNDLFSAVGDGIVLCKMINLSVPDTIDERT 982
EEEKYAFVNWINKALENDPDCRHVIPM+PNT+DLF AVGDGIV CKMINLSVPDTIDER
Sbjct: 123 EEEKYAFVNWINKALENDPDCRHVIPMNPNTDDLFKAVGDGIVFCKMINLSVPDTIDERA 182
Query: 983 INKKKLTPFTIQENLNLALNSASAIGCHVVNIGAEDLKEGKPYLVLGLLWQVIKIGLFAD 1162
INKKKLTPF IQENLNLALNSASAIGCHVVNIGAEDL+ GKP+LVLGLLWQ+IKIGLFAD
Sbjct: 183 INKKKLTPFIIQENLNLALNSASAIGCHVVNIGAEDLRAGKPHLVLGLLWQIIKIGLFAD 242
Query: 1163 IELSRNEALAALLREGESLEDLMKLSPEELLLRWANYHLENAGCNKINNFSSDI------ 1324
IELSRNEALAALLR+GE+LE+LMKLSPEELLLRWAN+HLEN+G KINNFS+DI
Sbjct: 243 IELSRNEALAALLRDGETLEELMKLSPEELLLRWANFHLENSGWQKINNFSADIKLIDFS 302
Query: 1325 ---KDSKAYYHLLEQVAPKGDEEGIPAVVIDMSGLREKDDIQRAECMLQQAERLGCRQFV 1495
KDSKAY+HLL Q+APKG +EG P + I+MSG E DD++RAE MLQQA++LGCRQFV
Sbjct: 303 NSVKDSKAYFHLLNQIAPKGQKEGEPRIDINMSGFNETDDLKRAESMLQQADKLGCRQFV 362
Query: 1496 TAPMWSEGTPR*TW-XXXXXXHRYPALHKPETQTSTGGLLK 1615
T G P+ ++YPAL KPE Q LL+
Sbjct: 363 TPADVVSGNPKLNLAFVANLFNKYPALTKPENQDIDWTLLE 403
Score = 70.1 bits (170), Expect = 6e-12
Identities = 34/54 (62%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Frame = +1
Query: 1504 DVVRGNPKVNLAFIATS-SQIPRPAQTRDPDIDWGALESETREERTFRNWMNSL 1662
DVV GNPK+NLAF+A ++ P + + DIDW LE ETREERTFRNWMNSL
Sbjct: 366 DVVSGNPKLNLAFVANLFNKYPALTKPENQDIDWTLLEGETREERTFRNWMNSL 419
Score = 52.4 bits (124), Expect = 1e-06
Identities = 59/236 (25%), Positives = 96/236 (40%), Gaps = 8/236 (3%)
Frame = +2
Query: 809 EKYAFVNWINKALENDPDCRHVIPMDPNTNDLFSAVGDGIVLCKMIN-LSVPDTIDERTI 985
E+ F NW+N + ++P+ N L++ + D +V+ ++ + VP +D +
Sbjct: 408 EERTFRNWMNS-----------LGVNPHVNHLYADLQDALVILQLYERIKVP--VDWSKV 454
Query: 986 NKKKLTPFTIQENLNLALNSASAIGCH-----VVNIGAEDLKEGKPYLVLGLLWQVIKIG 1150
NK N A +G H +V IG +DL +G L L L+WQ
Sbjct: 455 NKPPYPKLGANMKKLENCNYAVELGKHPAKFSLVGIGGQDLNDGNQTLTLALVWQ----- 509
Query: 1151 LFADIELSRNEALAALLREGESLEDLMKLSPEELLLRWANYHLENAG-CNKINNF-SSDI 1324
L R L L E L D K + +++++ W N L AG I +F I
Sbjct: 510 ------LMRRYTLNVL----EDLGDGQKAN-DDIIVSWVNRTLNEAGKSTSIQSFKDKTI 558
Query: 1325 KDSKAYYHLLEQVAPKGDEEGIPAVVIDMSGLREKDDIQRAECMLQQAERLGCRQF 1492
S A L++ + P I ++ L E D A+ + A R+G R +
Sbjct: 559 SSSLAVVDLIDAIQP----GCINYDLVKSGTLTEDDKHNNAKYAVSMARRIGARVY 610
>ref|NP_001096769.1| plastin-1 [Bos taurus].
Length = 630
Score = 520 bits (1338), Expect = e-147
Identities = 256/387 (66%), Positives = 309/387 (79%), Gaps = 1/387 (0%)
Frame = +2
Query: 458 SVSDEEMMELREAFAKVDTDGNGYISCNELNDLFKAACLPLPGYRVREITENLMATGDLD 637
++S EE+ EL+EAF K+D D +GY+S EL DLFK A LPLPGY+VREI E ++A D +
Sbjct: 7 TISREELEELQEAFNKIDIDNSGYVSDYELQDLFKEASLPLPGYKVREIVEKILAVADNN 66
Query: 638 RDGRISFDEFIKVFHGLKSTEVAKTFRKAINKKEGICAIGGTSEQSSVGTQHSYSEEEKY 817
+D RISF+EF+ + LKS +++KTFRK INK+EGI AIGGTS SS GTQHSYSEEEK
Sbjct: 67 KDSRISFEEFVSLMQELKSKDISKTFRKIINKREGITAIGGTSSISSEGTQHSYSEEEKV 126
Query: 818 AFVNWINKALENDPDCRHVIPMDPNTNDLFSAVGDGIVLCKMINLSVPDTIDERTINKKK 997
AFVNWINKALENDPDC+H+IPM+PN + LF ++ DGI+LCKMINLS PDTIDER INKKK
Sbjct: 127 AFVNWINKALENDPDCKHLIPMNPNDDSLFKSLADGILLCKMINLSEPDTIDERAINKKK 186
Query: 998 LTPFTIQENLNLALNSASAIGCHVVNIGAEDLKEGKPYLVLGLLWQVIKIGLFADIELSR 1177
LTPFTI ENLNLALNSASAIGC VVNIGA+DL EGKP+LVLGLLWQ+IK+GLFADIE+SR
Sbjct: 187 LTPFTISENLNLALNSASAIGCTVVNIGAQDLTEGKPHLVLGLLWQIIKVGLFADIEISR 246
Query: 1178 NEALAALLREGESLEDLMKLSPEELLLRWANYHLENAGCNKINNFSSDIKDSKAYYHLLE 1357
NEAL ALL+EGE LE+LM+LSPEELLL+W NYHL NAG I+NFS DIKDS+AY+HLL
Sbjct: 247 NEALIALLKEGEDLEELMRLSPEELLLQWVNYHLTNAGWPTISNFSHDIKDSRAYFHLLN 306
Query: 1358 QVAPKGDEEGIPAVVIDMSGLREKDDIQRAECMLQQAERLGCRQFVTAPMWSEGTPR*TW 1537
Q+APKGD + PA+ ID++G EK+D++RAE MLQ+A++LGCRQFVT G P+
Sbjct: 307 QIAPKGDRDDGPAIAIDLTGFSEKNDLKRAEFMLQEADKLGCRQFVTPADVVSGNPKLNL 366
Query: 1538 -XXXXXXHRYPALHKPETQTSTGGLLK 1615
+ YP LHKP+ LL+
Sbjct: 367 AFVANLFNTYPGLHKPDNNDIDVNLLE 393
Score = 59.7 bits (143), Expect = 8e-09
Identities = 31/54 (57%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Frame = +1
Query: 1504 DVVRGNPKVNLAFIATS-SQIPRPAQTRDPDIDWGALESETREERTFRNWMNSL 1662
DVV GNPK+NLAF+A + P + + DID LE E++EERTFRNWMNSL
Sbjct: 356 DVVSGNPKLNLAFVANLFNTYPGLHKPDNNDIDVNLLEGESKEERTFRNWMNSL 409
Score = 53.9 bits (128), Expect = 4e-07
Identities = 57/240 (23%), Positives = 102/240 (42%), Gaps = 13/240 (5%)
Frame = +2
Query: 806 EEKYAFVNWINKALENDPDCRHVIPMDPNTNDLFSAVGDGIVLCKMINLSVPDTIDERTI 985
+E+ F NW+N + ++P N L+S + D +V+ ++ + + +D +
Sbjct: 397 KEERTFRNWMNS-----------LGVNPYINHLYSDLADALVIFQLYEM-IRVPVDWSHV 444
Query: 986 NKKKLTPFTIQ----ENLNLALN-SASAIGCHVVNIGAEDLKEGKPYLVLGLLWQVIK-- 1144
NK EN N A+ + +V I +DL EG L L L+WQ+++
Sbjct: 445 NKPPYPALGGNMKKIENCNYAVELGKNKAKFSLVGIAGQDLNEGNSTLTLALVWQLMRRY 504
Query: 1145 -IGLFADIELSRNEALAALLREGESLEDLMKLSPEELLLRWANYHLENAGCNKINNFSSD 1321
+ + +D L EGE + D +++ W N L++A NK N F S
Sbjct: 505 TLNVLSD------------LGEGEKVND-------AIIIEWVNQTLKSA--NK-NTFISS 542
Query: 1322 IKD-----SKAYYHLLEQVAPKGDEEGIPAVVIDMSGLREKDDIQRAECMLQQAERLGCR 1486
KD S L++ +AP + +I L ++D + A+ + A ++G R
Sbjct: 543 FKDKSISTSLPVLDLIDAIAP----NAVRQEMIKREDLSDEDKLNNAKYAISVARKIGAR 598
>ref|XP_002697238.1| PREDICTED: dystonin [Bos taurus].
Length = 5653
Score = 66.2 bits (160), Expect = 8e-11
Identities = 56/224 (25%), Positives = 100/224 (44%)
Frame = +2
Query: 809 EKYAFVNWINKALENDPDCRHVIPMDPNTNDLFSAVGDGIVLCKMINLSVPDTIDERTIN 988
+K F WIN+ H++ + + NDL+ + DG L ++ + DT+
Sbjct: 213 QKKTFTKWINQ---------HLMKVRKHVNDLYEDLRDGHNLISLLEVLSGDTLPR---- 259
Query: 989 KKKLTPFTIQENLNLALNSASAIGCHVVNIGAEDLKEGKPYLVLGLLWQVIKIGLFADIE 1168
+K F +N+ +AL+ +VNI +D+ +G P L LGL+W +I +DI
Sbjct: 260 EKGRMRFHRLQNVQIALDYLKRRQVKLVNIRNDDITDGNPKLTLGLIWTIILHFQISDIH 319
Query: 1169 LSRNEALAALLREGESLEDLMKLSPEELLLRWANYHLENAGCNKINNFSSDIKDSKAYYH 1348
++ GES ED +S +E LL W E + NF++ +D K +
Sbjct: 320 VT-----------GES-ED---MSAKERLLLWTQQATEGYAGIRCENFTTCWRDGKLFNA 364
Query: 1349 LLEQVAPKGDEEGIPAVVIDMSGLREKDDIQRAECMLQQAERLG 1480
++ + P +IDM+ + + ++ E AE++G
Sbjct: 365 IIHKYRPD---------LIDMNTVAVQSNLANLEHAFYVAEKIG 399
>ref|XP_615341.3| PREDICTED: dystonin isoform 2 [Bos taurus].
Length = 5503
Score = 66.2 bits (160), Expect = 8e-11
Identities = 56/224 (25%), Positives = 100/224 (44%)
Frame = +2
Query: 809 EKYAFVNWINKALENDPDCRHVIPMDPNTNDLFSAVGDGIVLCKMINLSVPDTIDERTIN 988
+K F WIN+ H++ + + NDL+ + DG L ++ + DT+
Sbjct: 37 QKKTFTKWINQ---------HLMKVRKHVNDLYEDLRDGHNLISLLEVLSGDTLPR---- 83
Query: 989 KKKLTPFTIQENLNLALNSASAIGCHVVNIGAEDLKEGKPYLVLGLLWQVIKIGLFADIE 1168
+K F +N+ +AL+ +VNI +D+ +G P L LGL+W +I +DI
Sbjct: 84 EKGRMRFHRLQNVQIALDYLKRRQVKLVNIRNDDITDGNPKLTLGLIWTIILHFQISDIH 143
Query: 1169 LSRNEALAALLREGESLEDLMKLSPEELLLRWANYHLENAGCNKINNFSSDIKDSKAYYH 1348
++ GES ED +S +E LL W E + NF++ +D K +
Sbjct: 144 VT-----------GES-ED---MSAKERLLLWTQQATEGYAGIRCENFTTCWRDGKLFNA 188
Query: 1349 LLEQVAPKGDEEGIPAVVIDMSGLREKDDIQRAECMLQQAERLG 1480
++ + P +IDM+ + + ++ E AE++G
Sbjct: 189 IIHKYRPD---------LIDMNTVAVQSNLANLEHAFYVAEKIG 223
>ref|XP_002702867.1| PREDICTED: dystonin [Bos taurus].
Length = 5679
Score = 66.2 bits (160), Expect = 8e-11
Identities = 56/224 (25%), Positives = 100/224 (44%)
Frame = +2
Query: 809 EKYAFVNWINKALENDPDCRHVIPMDPNTNDLFSAVGDGIVLCKMINLSVPDTIDERTIN 988
+K F WIN+ H++ + + NDL+ + DG L ++ + DT+
Sbjct: 213 QKKTFTKWINQ---------HLMKVRKHVNDLYEDLRDGHNLISLLEVLSGDTLPR---- 259
Query: 989 KKKLTPFTIQENLNLALNSASAIGCHVVNIGAEDLKEGKPYLVLGLLWQVIKIGLFADIE 1168
+K F +N+ +AL+ +VNI +D+ +G P L LGL+W +I +DI
Sbjct: 260 EKGRMRFHRLQNVQIALDYLKRRQVKLVNIRNDDITDGNPKLTLGLIWTIILHFQISDIH 319
Query: 1169 LSRNEALAALLREGESLEDLMKLSPEELLLRWANYHLENAGCNKINNFSSDIKDSKAYYH 1348
++ GES ED +S +E LL W E + NF++ +D K +
Sbjct: 320 VT-----------GES-ED---MSAKERLLLWTQQATEGYAGIRCENFTTCWRDGKLFNA 364
Query: 1349 LLEQVAPKGDEEGIPAVVIDMSGLREKDDIQRAECMLQQAERLG 1480
++ + P +IDM+ + + ++ E AE++G
Sbjct: 365 IIHKYRPD---------LIDMNTVAVQSNLANLEHAFYVAEKIG 399
>ref|NP_001137332.1| microtubule-actin cross-linking factor 1 [Bos taurus].
Length = 5422
Score = 63.2 bits (152), Expect = 7e-10
Identities = 60/246 (24%), Positives = 103/246 (41%)
Frame = +2
Query: 764 SEQSSVGTQHSYSEEEKYAFVNWINKALENDPDCRHVIPMDPNTNDLFSAVGDGIVLCKM 943
+E++ V +K F W NK H++ + + NDL+ + DG L +
Sbjct: 65 AERAVVRVADERDRVQKKTFTKWANK---------HLMKVRKHINDLYEDLRDGHNLISL 115
Query: 944 INLSVPDTIDERTINKKKLTPFTIQENLNLALNSASAIGCHVVNIGAEDLKEGKPYLVLG 1123
+ + + +K F +N+ +AL+ +VNI +D+ +G P L LG
Sbjct: 116 LEVLSGIKLPR----EKGRMRFHRLQNVQIALDFLKQRQVKLVNIRNDDITDGNPKLTLG 171
Query: 1124 LLWQVIKIGLFADIELSRNEALAALLREGESLEDLMKLSPEELLLRWANYHLENAGCNKI 1303
L+W +I +DI +S GES + +S +E LL W K
Sbjct: 172 LIWTIILHFQISDIYIS-----------GESGD----MSAKEKLLLWTQKVTAGYTGIKC 216
Query: 1304 NNFSSDIKDSKAYYHLLEQVAPKGDEEGIPAVVIDMSGLREKDDIQRAECMLQQAERLGC 1483
NFSS D K + L+ + P ++DM ++ + + + E + AERLG
Sbjct: 217 TNFSSCWSDGKMFNALIHRYRPD---------LVDMERVQIQSNRENLEQAFEVAERLGV 267
Query: 1484 RQFVTA 1501
+ + A
Sbjct: 268 TRLLDA 273
>ref|NP_001179205.1| spectrin beta chain, brain 1 [Bos taurus].
Length = 2363
Score = 56.2 bits (134), Expect = 8e-08
Identities = 44/189 (23%), Positives = 85/189 (44%), Gaps = 2/189 (1%)
Frame = +2
Query: 809 EKYAFVNWINKALENDPDCRHVIPMDPNTNDLFSAVGDGIVLCKMINLSVPDTIDERTIN 988
+K F W+N H+ + DL++ + DG +L K++ + + + + T
Sbjct: 56 QKKTFTKWVNS---------HLARVSCRITDLYTDLRDGRMLIKLLEVLSGERLPKPTKG 106
Query: 989 KKKLTPFTIQENLNLALNSASAIGCHVVNIGAEDLKEGKPYLVLGLLWQVIKIGLFADIE 1168
+ ++ EN++ AL H+ N+G+ D+ +G L LGL+W +I DI
Sbjct: 107 RMRIHCL---ENVDKALQFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDIS 163
Query: 1169 LSRNEALAALLREGESLEDLMKLSPEELLLRWANYHLENAGCNKIN--NFSSDIKDSKAY 1342
+ E+ ++ K S ++ LL W ++ AG +N NF++ +D A+
Sbjct: 164 V-------------ETEDNKEKKSAKDALLLWC--QMKTAGYPNVNIHNFTTSWRDGMAF 208
Query: 1343 YHLLEQVAP 1369
L+ + P
Sbjct: 209 NALIHKHRP 217
>ref|XP_002699440.1| PREDICTED: spectrin, beta, non-erythrocytic 2-like [Bos taurus].
Length = 1068
Score = 56.2 bits (134), Expect = 8e-08
Identities = 42/187 (22%), Positives = 81/187 (43%)
Frame = +2
Query: 809 EKYAFVNWINKALENDPDCRHVIPMDPNTNDLFSAVGDGIVLCKMINLSVPDTIDERTIN 988
+K F W+N H+ + DL+S + DG L +++ + +T+ + T
Sbjct: 66 QKKTFTKWVNS---------HLARVTCRVGDLYSDLRDGRNLLRLLEVLSGETLPKPTKG 116
Query: 989 KKKLTPFTIQENLNLALNSASAIGCHVVNIGAEDLKEGKPYLVLGLLWQVIKIGLFADIE 1168
+ ++ EN++ AL H+ N+G+ D+ +G L LGL+W +I DI
Sbjct: 117 RMRIHCL---ENVDKALQFLKEQKVHLENMGSHDIVDGNHRLTLGLVWTIILRFQIQDIS 173
Query: 1169 LSRNEALAALLREGESLEDLMKLSPEELLLRWANYHLENAGCNKINNFSSDIKDSKAYYH 1348
+ E+ ++ K S ++ LL W +NNF++ +D A+
Sbjct: 174 V-------------ETEDNKEKKSAKDALLLWCQMKTAGYPNVNVNNFTTSWRDGLAFNA 220
Query: 1349 LLEQVAP 1369
++ + P
Sbjct: 221 IVHKHRP 227
>ref|XP_002691372.1| PREDICTED: spectrin, beta, non-erythrocytic 1 [Bos taurus].
Length = 2363
Score = 56.2 bits (134), Expect = 8e-08
Identities = 44/189 (23%), Positives = 85/189 (44%), Gaps = 2/189 (1%)
Frame = +2
Query: 809 EKYAFVNWINKALENDPDCRHVIPMDPNTNDLFSAVGDGIVLCKMINLSVPDTIDERTIN 988
+K F W+N H+ + DL++ + DG +L K++ + + + + T
Sbjct: 56 QKKTFTKWVNS---------HLARVSCRITDLYTDLRDGRMLIKLLEVLSGERLPKPTKG 106
Query: 989 KKKLTPFTIQENLNLALNSASAIGCHVVNIGAEDLKEGKPYLVLGLLWQVIKIGLFADIE 1168
+ ++ EN++ AL H+ N+G+ D+ +G L LGL+W +I DI
Sbjct: 107 RMRIHCL---ENVDKALQFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDIS 163
Query: 1169 LSRNEALAALLREGESLEDLMKLSPEELLLRWANYHLENAGCNKIN--NFSSDIKDSKAY 1342
+ E+ ++ K S ++ LL W ++ AG +N NF++ +D A+
Sbjct: 164 V-------------ETEDNKEKKSAKDALLLWC--QMKTAGYPNVNIHNFTTSWRDGMAF 208
Query: 1343 YHLLEQVAP 1369
L+ + P
Sbjct: 209 NALIHKHRP 217
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 63,753,855
Number of extensions: 1716995
Number of successful extensions: 5493
Number of sequences better than 1.0e-05: 15
Number of HSP's gapped: 5389
Number of HSP's successfully gapped: 20
Length of query: 560
Length of database: 17,681,374
Length adjustment: 107
Effective length of query: 453
Effective length of database: 14,140,958
Effective search space: 6405853974
Effective search space used: 6405853974
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007283
(1681 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_534124.2| PREDICTED: similar to L-plastin (Lymphocyte cyt... 714 0.0
Alignment gi|XP_848404.1| PREDICTED: similar to L-plastin (Lymphocyte cyt... 714 0.0
Alignment gi|XP_863975.1| PREDICTED: similar to plastin 3 isoform 7 [Cani... 570 e-162
Alignment gi|XP_538147.2| PREDICTED: similar to plastin 3 isoform 1 [Cani... 570 e-162
Alignment gi|XP_863953.1| PREDICTED: similar to plastin 3 isoform 6 [Cani... 556 e-158
Alignment gi|XP_863865.1| PREDICTED: similar to plastin 3 isoform 2 [Cani... 555 e-158
Alignment gi|XP_863890.1| PREDICTED: similar to plastin 3 isoform 3 [Cani... 552 e-157
Alignment gi|XP_863933.1| PREDICTED: similar to plastin 3 isoform 5 [Cani... 551 e-157
Alignment gi|XP_863912.1| PREDICTED: similar to plastin 3 isoform 4 [Cani... 541 e-154
Alignment gi|XP_542817.2| PREDICTED: similar to I-plastin (Intestine-spec... 517 e-146
>ref|XP_534124.2| PREDICTED: similar to L-plastin (Lymphocyte cytosolic protein 1)
(LCP-1) (LC64P) isoform 1 [Canis familiaris].
Length = 601
Score = 714 bits (1844), Expect = 0.0
Identities = 361/391 (92%), Positives = 367/391 (93%), Gaps = 1/391 (0%)
Frame = +2
Query: 446 MARGSVSDEEMMELREAFAKVDTDGNGYISCNELNDLFKAACLPLPGYRVREITENLMAT 625
MARGSVSDEEMMELREAFAKVDTDGNGYISCNELNDLFKAACLPLPGYRVREI ENLMAT
Sbjct: 1 MARGSVSDEEMMELREAFAKVDTDGNGYISCNELNDLFKAACLPLPGYRVREIAENLMAT 60
Query: 626 GDLDRDGRISFDEFIKVFHGLKSTEVAKTFRKAINKKEGICAIGGTSEQSSVGTQHSYSE 805
GDLD+DGRISFDEFIKVFHGLKSTEVAKTFRKAINKKEGICAIGGTSEQSSVGTQHSYSE
Sbjct: 61 GDLDQDGRISFDEFIKVFHGLKSTEVAKTFRKAINKKEGICAIGGTSEQSSVGTQHSYSE 120
Query: 806 EEKYAFVNWINKALENDPDCRHVIPMDPNTNDLFSAVGDGIVLCKMINLSVPDTIDERTI 985
EEKYAFVNWINKALENDPDCRHVIPM+PNTNDLFSAVGDGIVLCKMINLSVPDTIDERTI
Sbjct: 121 EEKYAFVNWINKALENDPDCRHVIPMNPNTNDLFSAVGDGIVLCKMINLSVPDTIDERTI 180
Query: 986 NKKKLTPFTIQENLNLALNSASAIGCHVVNIGAEDLKEGKPYLVLGLLWQVIKIGLFADI 1165
NKKKLTPFTIQENLNLALNSASAIGCHVVNIGAEDLKEGKPYLVLGLLWQVIKIGLFADI
Sbjct: 181 NKKKLTPFTIQENLNLALNSASAIGCHVVNIGAEDLKEGKPYLVLGLLWQVIKIGLFADI 240
Query: 1166 ELSRNEALAALLREGESLEDLMKLSPEELLLRWANYHLENAGCNKINNFSSDIKDSKAYY 1345
ELSRNEAL ALLREGESLEDLMKLSPEELLLRWANYHLENAGCNKINNFS+DIKDSKAYY
Sbjct: 241 ELSRNEALIALLREGESLEDLMKLSPEELLLRWANYHLENAGCNKINNFSTDIKDSKAYY 300
Query: 1346 HLLEQVAPKGDEEGIPAVVIDMSGLREKDDIQRAECMLQQAERLGCRQFVTAPMWSEGTP 1525
HLLEQVAPKGDEEGIPAVVIDMSGLREKDDIQRAECMLQQAERLGCRQFVTA G P
Sbjct: 301 HLLEQVAPKGDEEGIPAVVIDMSGLREKDDIQRAECMLQQAERLGCRQFVTATDVVRGNP 360
Query: 1526 R*TW-XXXXXXHRYPALHKPETQTSTGGLLK 1615
+ +RYPALHKPE Q G L+
Sbjct: 361 KLNLAFIANLFNRYPALHKPENQDIDWGALE 391
Score = 81.3 bits (199), Expect = 3e-15
Identities = 41/62 (66%), Positives = 47/62 (75%), Gaps = 1/62 (1%)
Frame = +1
Query: 1498 STDVVRGNPKVNLAFIATS-SQIPRPAQTRDPDIDWGALESETREERTFRNWMNSLXCXX 1674
+TDVVRGNPK+NLAFIA ++ P + + DIDWGALE ETREERTFRNWMNSL
Sbjct: 352 ATDVVRGNPKLNLAFIANLFNRYPALHKPENQDIDWGALEGETREERTFRNWMNSLGVNP 411
Query: 1675 RV 1680
RV
Sbjct: 412 RV 413
>ref|XP_848404.1| PREDICTED: similar to L-plastin (Lymphocyte cytosolic protein 1)
(LCP-1) (LC64P) isoform 2 [Canis familiaris].
Length = 601
Score = 714 bits (1844), Expect = 0.0
Identities = 361/391 (92%), Positives = 367/391 (93%), Gaps = 1/391 (0%)
Frame = +2
Query: 446 MARGSVSDEEMMELREAFAKVDTDGNGYISCNELNDLFKAACLPLPGYRVREITENLMAT 625
MARGSVSDEEMMELREAFAKVDTDGNGYISCNELNDLFKAACLPLPGYRVREI ENLMAT
Sbjct: 1 MARGSVSDEEMMELREAFAKVDTDGNGYISCNELNDLFKAACLPLPGYRVREIAENLMAT 60
Query: 626 GDLDRDGRISFDEFIKVFHGLKSTEVAKTFRKAINKKEGICAIGGTSEQSSVGTQHSYSE 805
GDLD+DGRISFDEFIKVFHGLKSTEVAKTFRKAINKKEGICAIGGTSEQSSVGTQHSYSE
Sbjct: 61 GDLDQDGRISFDEFIKVFHGLKSTEVAKTFRKAINKKEGICAIGGTSEQSSVGTQHSYSE 120
Query: 806 EEKYAFVNWINKALENDPDCRHVIPMDPNTNDLFSAVGDGIVLCKMINLSVPDTIDERTI 985
EEKYAFVNWINKALENDPDCRHVIPM+PNTNDLFSAVGDGIVLCKMINLSVPDTIDERTI
Sbjct: 121 EEKYAFVNWINKALENDPDCRHVIPMNPNTNDLFSAVGDGIVLCKMINLSVPDTIDERTI 180
Query: 986 NKKKLTPFTIQENLNLALNSASAIGCHVVNIGAEDLKEGKPYLVLGLLWQVIKIGLFADI 1165
NKKKLTPFTIQENLNLALNSASAIGCHVVNIGAEDLKEGKPYLVLGLLWQVIKIGLFADI
Sbjct: 181 NKKKLTPFTIQENLNLALNSASAIGCHVVNIGAEDLKEGKPYLVLGLLWQVIKIGLFADI 240
Query: 1166 ELSRNEALAALLREGESLEDLMKLSPEELLLRWANYHLENAGCNKINNFSSDIKDSKAYY 1345
ELSRNEAL ALLREGESLEDLMKLSPEELLLRWANYHLENAGCNKINNFS+DIKDSKAYY
Sbjct: 241 ELSRNEALIALLREGESLEDLMKLSPEELLLRWANYHLENAGCNKINNFSTDIKDSKAYY 300
Query: 1346 HLLEQVAPKGDEEGIPAVVIDMSGLREKDDIQRAECMLQQAERLGCRQFVTAPMWSEGTP 1525
HLLEQVAPKGDEEGIPAVVIDMSGLREKDDIQRAECMLQQAERLGCRQFVTA G P
Sbjct: 301 HLLEQVAPKGDEEGIPAVVIDMSGLREKDDIQRAECMLQQAERLGCRQFVTATDVVRGNP 360
Query: 1526 R*TW-XXXXXXHRYPALHKPETQTSTGGLLK 1615
+ +RYPALHKPE Q G L+
Sbjct: 361 KLNLAFIANLFNRYPALHKPENQDIDWGALE 391
Score = 81.3 bits (199), Expect = 3e-15
Identities = 41/62 (66%), Positives = 47/62 (75%), Gaps = 1/62 (1%)
Frame = +1
Query: 1498 STDVVRGNPKVNLAFIATS-SQIPRPAQTRDPDIDWGALESETREERTFRNWMNSLXCXX 1674
+TDVVRGNPK+NLAFIA ++ P + + DIDWGALE ETREERTFRNWMNSL
Sbjct: 352 ATDVVRGNPKLNLAFIANLFNRYPALHKPENQDIDWGALEGETREERTFRNWMNSLGVNP 411
Query: 1675 RV 1680
RV
Sbjct: 412 RV 413
>ref|XP_863975.1| PREDICTED: similar to plastin 3 isoform 7 [Canis familiaris].
Length = 630
Score = 570 bits (1470), Expect = e-162
Identities = 284/392 (72%), Positives = 331/392 (84%), Gaps = 1/392 (0%)
Frame = +2
Query: 443 KMARGSVSDEEMMELREAFAKVDTDGNGYISCNELNDLFKAACLPLPGYRVREITENLMA 622
+MA +S +E+ EL+EAFAKVD + NG+I EL++LFK A +PLPGY+VREI + LM
Sbjct: 3 EMATTQISKDELDELKEAFAKVDLNSNGFICDYELHELFKEANMPLPGYKVREIIQKLML 62
Query: 623 TGDLDRDGRISFDEFIKVFHGLKSTEVAKTFRKAINKKEGICAIGGTSEQSSVGTQHSYS 802
GD ++DG+ISFDEF+ +F +KS+++AKTFRKAIN+KEGICA+GGTSE SS GTQHSYS
Sbjct: 63 DGDRNKDGKISFDEFVYIFQEVKSSDIAKTFRKAINRKEGICALGGTSELSSEGTQHSYS 122
Query: 803 EEEKYAFVNWINKALENDPDCRHVIPMDPNTNDLFSAVGDGIVLCKMINLSVPDTIDERT 982
EEEKYAFVNWINKALENDPDCRHVIPM+PNT+DLF AVGDGIVLCKMINLSVPDTIDER
Sbjct: 123 EEEKYAFVNWINKALENDPDCRHVIPMNPNTDDLFKAVGDGIVLCKMINLSVPDTIDERA 182
Query: 983 INKKKLTPFTIQENLNLALNSASAIGCHVVNIGAEDLKEGKPYLVLGLLWQVIKIGLFAD 1162
INKKKLTPF IQENLNLALNSASAIGCHVVNIGAEDL+ GKP+LVLGLLWQ+IKIGLFAD
Sbjct: 183 INKKKLTPFIIQENLNLALNSASAIGCHVVNIGAEDLRAGKPHLVLGLLWQIIKIGLFAD 242
Query: 1163 IELSRNEALAALLREGESLEDLMKLSPEELLLRWANYHLENAGCNKINNFSSDIKDSKAY 1342
IELSRNEALAALLR+GE+LE+LMKLSPEELLLRWAN+HLEN+G KINNFS+DIKDSKAY
Sbjct: 243 IELSRNEALAALLRDGETLEELMKLSPEELLLRWANFHLENSGWQKINNFSADIKDSKAY 302
Query: 1343 YHLLEQVAPKGDEEGIPAVVIDMSGLREKDDIQRAECMLQQAERLGCRQFVTAPMWSEGT 1522
+HLL Q+APKG +EG P + I+MSG E DD++RAE MLQQA++LGCRQFVT G
Sbjct: 303 FHLLNQIAPKGQKEGEPRIDINMSGFNETDDLKRAESMLQQADKLGCRQFVTPADVVSGN 362
Query: 1523 PR*TW-XXXXXXHRYPALHKPETQTSTGGLLK 1615
P+ ++YPAL KPE Q LL+
Sbjct: 363 PKLNLAFVANLFNKYPALTKPENQDIDWTLLE 394
Score = 70.1 bits (170), Expect = 6e-12
Identities = 34/54 (62%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Frame = +1
Query: 1504 DVVRGNPKVNLAFIATS-SQIPRPAQTRDPDIDWGALESETREERTFRNWMNSL 1662
DVV GNPK+NLAF+A ++ P + + DIDW LE ETREERTFRNWMNSL
Sbjct: 357 DVVSGNPKLNLAFVANLFNKYPALTKPENQDIDWTLLEGETREERTFRNWMNSL 410
Score = 52.8 bits (125), Expect = 1e-06
Identities = 59/236 (25%), Positives = 96/236 (40%), Gaps = 8/236 (3%)
Frame = +2
Query: 809 EKYAFVNWINKALENDPDCRHVIPMDPNTNDLFSAVGDGIVLCKMIN-LSVPDTIDERTI 985
E+ F NW+N + ++P+ N L++ + D +V+ ++ + VP +D +
Sbjct: 399 EERTFRNWMNS-----------LGVNPHVNHLYADLQDALVILQLYERIKVP--VDWSKV 445
Query: 986 NKKKLTPFTIQENLNLALNSASAIGCH-----VVNIGAEDLKEGKPYLVLGLLWQVIKIG 1150
NK N A +G H +V IG +DL +G L L L+WQ
Sbjct: 446 NKPPYPKLGANMKKLENCNYAVELGKHPAKFSLVGIGGQDLNDGNQTLTLALVWQ----- 500
Query: 1151 LFADIELSRNEALAALLREGESLEDLMKLSPEELLLRWANYHLENAG-CNKINNF-SSDI 1324
L R L L E L D K + +++++ W N L AG I +F I
Sbjct: 501 ------LMRRYTLNVL----EDLGDGQKAN-DDIIVSWVNRTLAEAGKSTSIQSFKDKTI 549
Query: 1325 KDSKAYYHLLEQVAPKGDEEGIPAVVIDMSGLREKDDIQRAECMLQQAERLGCRQF 1492
S A L++ + P I ++ L E D A+ + A R+G R +
Sbjct: 550 SSSLAVVDLIDAIQP----GCINYDLVKSGNLTEDDKHNNAKYAVSMARRIGARVY 601
>ref|XP_538147.2| PREDICTED: similar to plastin 3 isoform 1 [Canis familiaris].
Length = 630
Score = 570 bits (1470), Expect = e-162
Identities = 284/392 (72%), Positives = 331/392 (84%), Gaps = 1/392 (0%)
Frame = +2
Query: 443 KMARGSVSDEEMMELREAFAKVDTDGNGYISCNELNDLFKAACLPLPGYRVREITENLMA 622
+MA +S +E+ EL+EAFAKVD + NG+I EL++LFK A +PLPGY+VREI + LM
Sbjct: 3 EMATTQISKDELDELKEAFAKVDLNSNGFICDYELHELFKEANMPLPGYKVREIIQKLML 62
Query: 623 TGDLDRDGRISFDEFIKVFHGLKSTEVAKTFRKAINKKEGICAIGGTSEQSSVGTQHSYS 802
GD ++DG+ISFDEF+ +F +KS+++AKTFRKAIN+KEGICA+GGTSE SS GTQHSYS
Sbjct: 63 DGDRNKDGKISFDEFVYIFQEVKSSDIAKTFRKAINRKEGICALGGTSELSSEGTQHSYS 122
Query: 803 EEEKYAFVNWINKALENDPDCRHVIPMDPNTNDLFSAVGDGIVLCKMINLSVPDTIDERT 982
EEEKYAFVNWINKALENDPDCRHVIPM+PNT+DLF AVGDGIVLCKMINLSVPDTIDER
Sbjct: 123 EEEKYAFVNWINKALENDPDCRHVIPMNPNTDDLFKAVGDGIVLCKMINLSVPDTIDERA 182
Query: 983 INKKKLTPFTIQENLNLALNSASAIGCHVVNIGAEDLKEGKPYLVLGLLWQVIKIGLFAD 1162
INKKKLTPF IQENLNLALNSASAIGCHVVNIGAEDL+ GKP+LVLGLLWQ+IKIGLFAD
Sbjct: 183 INKKKLTPFIIQENLNLALNSASAIGCHVVNIGAEDLRAGKPHLVLGLLWQIIKIGLFAD 242
Query: 1163 IELSRNEALAALLREGESLEDLMKLSPEELLLRWANYHLENAGCNKINNFSSDIKDSKAY 1342
IELSRNEALAALLR+GE+LE+LMKLSPEELLLRWAN+HLEN+G KINNFS+DIKDSKAY
Sbjct: 243 IELSRNEALAALLRDGETLEELMKLSPEELLLRWANFHLENSGWQKINNFSADIKDSKAY 302
Query: 1343 YHLLEQVAPKGDEEGIPAVVIDMSGLREKDDIQRAECMLQQAERLGCRQFVTAPMWSEGT 1522
+HLL Q+APKG +EG P + I+MSG E DD++RAE MLQQA++LGCRQFVT G
Sbjct: 303 FHLLNQIAPKGQKEGEPRIDINMSGFNETDDLKRAESMLQQADKLGCRQFVTPADVVSGN 362
Query: 1523 PR*TW-XXXXXXHRYPALHKPETQTSTGGLLK 1615
P+ ++YPAL KPE Q LL+
Sbjct: 363 PKLNLAFVANLFNKYPALTKPENQDIDWTLLE 394
Score = 70.1 bits (170), Expect = 6e-12
Identities = 34/54 (62%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Frame = +1
Query: 1504 DVVRGNPKVNLAFIATS-SQIPRPAQTRDPDIDWGALESETREERTFRNWMNSL 1662
DVV GNPK+NLAF+A ++ P + + DIDW LE ETREERTFRNWMNSL
Sbjct: 357 DVVSGNPKLNLAFVANLFNKYPALTKPENQDIDWTLLEGETREERTFRNWMNSL 410
Score = 52.8 bits (125), Expect = 1e-06
Identities = 59/236 (25%), Positives = 96/236 (40%), Gaps = 8/236 (3%)
Frame = +2
Query: 809 EKYAFVNWINKALENDPDCRHVIPMDPNTNDLFSAVGDGIVLCKMIN-LSVPDTIDERTI 985
E+ F NW+N + ++P+ N L++ + D +V+ ++ + VP +D +
Sbjct: 399 EERTFRNWMNS-----------LGVNPHVNHLYADLQDALVILQLYERIKVP--VDWSKV 445
Query: 986 NKKKLTPFTIQENLNLALNSASAIGCH-----VVNIGAEDLKEGKPYLVLGLLWQVIKIG 1150
NK N A +G H +V IG +DL +G L L L+WQ
Sbjct: 446 NKPPYPKLGANMKKLENCNYAVELGKHPAKFSLVGIGGQDLNDGNQTLTLALVWQ----- 500
Query: 1151 LFADIELSRNEALAALLREGESLEDLMKLSPEELLLRWANYHLENAG-CNKINNF-SSDI 1324
L R L L E L D K + +++++ W N L AG I +F I
Sbjct: 501 ------LMRRYTLNVL----EDLGDGQKAN-DDIIVSWVNRTLAEAGKSTSIQSFKDKTI 549
Query: 1325 KDSKAYYHLLEQVAPKGDEEGIPAVVIDMSGLREKDDIQRAECMLQQAERLGCRQF 1492
S A L++ + P I ++ L E D A+ + A R+G R +
Sbjct: 550 SSSLAVVDLIDAIQP----GCINYDLVKSGNLTEDDKHNNAKYAVSMARRIGARVY 601
>ref|XP_863953.1| PREDICTED: similar to plastin 3 isoform 6 [Canis familiaris].
Length = 634
Score = 556 bits (1433), Expect = e-158
Identities = 281/396 (70%), Positives = 327/396 (82%), Gaps = 5/396 (1%)
Frame = +2
Query: 443 KMARGSVSDEEMMELREAFAKVDTDGNGYISCNELNDLFKAACLPLPGYRVREITENLMA 622
+MA +S +E+ EL+EAFAKVD + NG+I EL++LFK A +PLPGY+VREI + LM
Sbjct: 3 EMATTQISKDELDELKEAFAKVDLNSNGFICDYELHELFKEANMPLPGYKVREIIQKLML 62
Query: 623 TGDLDRDGRISFDEFIKVFHGLKSTEVAKTFRKAINKKEGICAIGGTSEQSSVGTQHSYS 802
GD ++DG+ISFDEF+ +F +KS+++AKTFRKAIN+KEGICA+GGTSE SS GTQHSYS
Sbjct: 63 DGDRNKDGKISFDEFVYIFQEVKSSDIAKTFRKAINRKEGICALGGTSELSSEGTQHSYS 122
Query: 803 EEEKYAFVNWINKALENDPDCRHVIPMDPNTNDLFSAVGDGIVLCKMINLSVPDTIDERT 982
EEEKYAFVNWINKALENDPDCRHVIPM+PNT+DLF AVGDGIVLCKMINLSVPDTIDER
Sbjct: 123 EEEKYAFVNWINKALENDPDCRHVIPMNPNTDDLFKAVGDGIVLCKMINLSVPDTIDERA 182
Query: 983 INKKKLTPFTIQENLNLALNSASAIGCHVVNIGAEDLKEGKPYLVLGLLWQVIKIGLFAD 1162
INKKKLTPF IQENLNLALNSASAIGCHVVNIGAEDL+ GKP+LVLGLLWQ+IKIGLFAD
Sbjct: 183 INKKKLTPFIIQENLNLALNSASAIGCHVVNIGAEDLRAGKPHLVLGLLWQIIKIGLFAD 242
Query: 1163 IELSRNEALAALLREGESLEDLMKLSPEELLLRWANYHLENAGCNKINNFSSDIKDSKAY 1342
IELSRNEALAALLR+GE+LE+LMKLSPEELLLRWAN+HLEN+G KINNFS+DIKDSKAY
Sbjct: 243 IELSRNEALAALLRDGETLEELMKLSPEELLLRWANFHLENSGWQKINNFSADIKDSKAY 302
Query: 1343 YHLLEQVAPKGDEEGIPAVVIDMSGLREKDDIQ----RAECMLQQAERLGCRQFVTAPMW 1510
+HLL Q+APKG +EG P + I+MSG + RAE MLQQA++LGCRQFVT
Sbjct: 303 FHLLNQIAPKGQKEGEPRIDINMSGFNVSIGVHLNSTRAESMLQQADKLGCRQFVTPADV 362
Query: 1511 SEGTPR*TW-XXXXXXHRYPALHKPETQTSTGGLLK 1615
G P+ ++YPAL KPE Q LL+
Sbjct: 363 VSGNPKLNLAFVANLFNKYPALTKPENQDIDWTLLE 398
Score = 70.1 bits (170), Expect = 6e-12
Identities = 34/54 (62%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Frame = +1
Query: 1504 DVVRGNPKVNLAFIATS-SQIPRPAQTRDPDIDWGALESETREERTFRNWMNSL 1662
DVV GNPK+NLAF+A ++ P + + DIDW LE ETREERTFRNWMNSL
Sbjct: 361 DVVSGNPKLNLAFVANLFNKYPALTKPENQDIDWTLLEGETREERTFRNWMNSL 414
Score = 52.8 bits (125), Expect = 1e-06
Identities = 59/236 (25%), Positives = 96/236 (40%), Gaps = 8/236 (3%)
Frame = +2
Query: 809 EKYAFVNWINKALENDPDCRHVIPMDPNTNDLFSAVGDGIVLCKMIN-LSVPDTIDERTI 985
E+ F NW+N + ++P+ N L++ + D +V+ ++ + VP +D +
Sbjct: 403 EERTFRNWMNS-----------LGVNPHVNHLYADLQDALVILQLYERIKVP--VDWSKV 449
Query: 986 NKKKLTPFTIQENLNLALNSASAIGCH-----VVNIGAEDLKEGKPYLVLGLLWQVIKIG 1150
NK N A +G H +V IG +DL +G L L L+WQ
Sbjct: 450 NKPPYPKLGANMKKLENCNYAVELGKHPAKFSLVGIGGQDLNDGNQTLTLALVWQ----- 504
Query: 1151 LFADIELSRNEALAALLREGESLEDLMKLSPEELLLRWANYHLENAG-CNKINNF-SSDI 1324
L R L L E L D K + +++++ W N L AG I +F I
Sbjct: 505 ------LMRRYTLNVL----EDLGDGQKAN-DDIIVSWVNRTLAEAGKSTSIQSFKDKTI 553
Query: 1325 KDSKAYYHLLEQVAPKGDEEGIPAVVIDMSGLREKDDIQRAECMLQQAERLGCRQF 1492
S A L++ + P I ++ L E D A+ + A R+G R +
Sbjct: 554 SSSLAVVDLIDAIQP----GCINYDLVKSGNLTEDDKHNNAKYAVSMARRIGARVY 605
>ref|XP_863865.1| PREDICTED: similar to plastin 3 isoform 2 [Canis familiaris].
Length = 624
Score = 555 bits (1431), Expect = e-158
Identities = 280/392 (71%), Positives = 327/392 (83%), Gaps = 1/392 (0%)
Frame = +2
Query: 443 KMARGSVSDEEMMELREAFAKVDTDGNGYISCNELNDLFKAACLPLPGYRVREITENLMA 622
+MA +S +E+ EL+EAFAKVD + NG+I EL++LFK A +PLPGY+VREI + LM
Sbjct: 3 EMATTQISKDELDELKEAFAKVDLNSNGFICDYELHELFKEANMPLPGYKVREIIQKLML 62
Query: 623 TGDLDRDGRISFDEFIKVFHGLKSTEVAKTFRKAINKKEGICAIGGTSEQSSVGTQHSYS 802
GD ++DG+ISFDEF+ +F +KS+++AKTFRKAIN+KEGICA+GGTSE SS GTQHSYS
Sbjct: 63 DGDRNKDGKISFDEFVYIFQEVKSSDIAKTFRKAINRKEGICALGGTSELSSEGTQHSYS 122
Query: 803 EEEKYAFVNWINKALENDPDCRHVIPMDPNTNDLFSAVGDGIVLCKMINLSVPDTIDERT 982
EEEKYAFVNWINKALENDPDCRHVIPM+PNT+DLF AVGDGIVLCKMINLSVPDTIDER
Sbjct: 123 EEEKYAFVNWINKALENDPDCRHVIPMNPNTDDLFKAVGDGIVLCKMINLSVPDTIDERA 182
Query: 983 INKKKLTPFTIQENLNLALNSASAIGCHVVNIGAEDLKEGKPYLVLGLLWQVIKIGLFAD 1162
INKKKLTPF IQENLNLALNSASAIGCHVVNIGAEDL+ GKP+LVLGLLWQ+IKIGLFAD
Sbjct: 183 INKKKLTPFIIQENLNLALNSASAIGCHVVNIGAEDLRAGKPHLVLGLLWQIIKIGLFAD 242
Query: 1163 IELSRNEALAALLREGESLEDLMKLSPEELLLRWANYHLENAGCNKINNFSSDIKDSKAY 1342
IELSRNEALAALLR+GE+LE+LMKLSPEELLLRWAN+HLEN+G KINNFS+DIKDSKAY
Sbjct: 243 IELSRNEALAALLRDGETLEELMKLSPEELLLRWANFHLENSGWQKINNFSADIKDSKAY 302
Query: 1343 YHLLEQVAPKGDEEGIPAVVIDMSGLREKDDIQRAECMLQQAERLGCRQFVTAPMWSEGT 1522
+HLL Q+APKG +EG P + I+++ L QRAE MLQQA++LGCRQFVT G
Sbjct: 303 FHLLNQIAPKGQKEGEPRIDINITNL-----FQRAESMLQQADKLGCRQFVTPADVVSGN 357
Query: 1523 PR*TW-XXXXXXHRYPALHKPETQTSTGGLLK 1615
P+ ++YPAL KPE Q LL+
Sbjct: 358 PKLNLAFVANLFNKYPALTKPENQDIDWTLLE 389
Score = 65.5 bits (158), Expect = 2e-10
Identities = 34/54 (62%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Frame = +1
Query: 1504 DVVRGNPKVNLAFIATS-SQIPRPAQTRDPDIDWGALESETREERTFRNWMNSL 1662
DVV GNPK+NLAF+A ++ P + + DIDW LE ETREERTFRNWMNSL
Sbjct: 352 DVVSGNPKLNLAFVANLFNKYPALTKPENQDIDWTLLE-ETREERTFRNWMNSL 404
Score = 52.8 bits (125), Expect = 1e-06
Identities = 59/236 (25%), Positives = 96/236 (40%), Gaps = 8/236 (3%)
Frame = +2
Query: 809 EKYAFVNWINKALENDPDCRHVIPMDPNTNDLFSAVGDGIVLCKMIN-LSVPDTIDERTI 985
E+ F NW+N + ++P+ N L++ + D +V+ ++ + VP +D +
Sbjct: 393 EERTFRNWMNS-----------LGVNPHVNHLYADLQDALVILQLYERIKVP--VDWSKV 439
Query: 986 NKKKLTPFTIQENLNLALNSASAIGCH-----VVNIGAEDLKEGKPYLVLGLLWQVIKIG 1150
NK N A +G H +V IG +DL +G L L L+WQ
Sbjct: 440 NKPPYPKLGANMKKLENCNYAVELGKHPAKFSLVGIGGQDLNDGNQTLTLALVWQ----- 494
Query: 1151 LFADIELSRNEALAALLREGESLEDLMKLSPEELLLRWANYHLENAG-CNKINNF-SSDI 1324
L R L L E L D K + +++++ W N L AG I +F I
Sbjct: 495 ------LMRRYTLNVL----EDLGDGQKAN-DDIIVSWVNRTLAEAGKSTSIQSFKDKTI 543
Query: 1325 KDSKAYYHLLEQVAPKGDEEGIPAVVIDMSGLREKDDIQRAECMLQQAERLGCRQF 1492
S A L++ + P I ++ L E D A+ + A R+G R +
Sbjct: 544 SSSLAVVDLIDAIQP----GCINYDLVKSGNLTEDDKHNNAKYAVSMARRIGARVY 595
>ref|XP_863890.1| PREDICTED: similar to plastin 3 isoform 3 [Canis familiaris].
Length = 624
Score = 552 bits (1423), Expect = e-157
Identities = 278/392 (70%), Positives = 326/392 (83%), Gaps = 1/392 (0%)
Frame = +2
Query: 443 KMARGSVSDEEMMELREAFAKVDTDGNGYISCNELNDLFKAACLPLPGYRVREITENLMA 622
+MA +S +E+ EL+EAFAKVD + NG+I EL++LFK A +PLPGY+VREI + LM
Sbjct: 3 EMATTQISKDELDELKEAFAKVDLNSNGFICDYELHELFKEANMPLPGYKVREIIQKLML 62
Query: 623 TGDLDRDGRISFDEFIKVFHGLKSTEVAKTFRKAINKKEGICAIGGTSEQSSVGTQHSYS 802
GD ++DG+ISFDEF+ +F +KS+++AKTFRKAIN+KEGICA+GGTSE SS GTQHSYS
Sbjct: 63 DGDRNKDGKISFDEFVYIFQEVKSSDIAKTFRKAINRKEGICALGGTSELSSEGTQHSYS 122
Query: 803 EEEKYAFVNWINKALENDPDCRHVIPMDPNTNDLFSAVGDGIVLCKMINLSVPDTIDERT 982
EEEKYAFVNWINKALENDPDCRHVIPM+PNT+DLF AVGDGIVLCKMINLSVPDTIDER
Sbjct: 123 EEEKYAFVNWINKALENDPDCRHVIPMNPNTDDLFKAVGDGIVLCKMINLSVPDTIDERA 182
Query: 983 INKKKLTPFTIQENLNLALNSASAIGCHVVNIGAEDLKEGKPYLVLGLLWQVIKIGLFAD 1162
INKKKLTPF IQENLNLALNSASAIGCHVVNIGAEDL+ GKP+LVLGLLWQ+IKIGLFAD
Sbjct: 183 INKKKLTPFIIQENLNLALNSASAIGCHVVNIGAEDLRAGKPHLVLGLLWQIIKIGLFAD 242
Query: 1163 IELSRNEALAALLREGESLEDLMKLSPEELLLRWANYHLENAGCNKINNFSSDIKDSKAY 1342
IELSRNEALAALLR+GE+LE+LMKLSPEELLLRWAN+HLEN+G KINNFS+DIKDSKAY
Sbjct: 243 IELSRNEALAALLRDGETLEELMKLSPEELLLRWANFHLENSGWQKINNFSADIKDSKAY 302
Query: 1343 YHLLEQVAPKGDEEGIPAVVIDMSGLREKDDIQRAECMLQQAERLGCRQFVTAPMWSEGT 1522
+HLL Q+APKG +EG P + I++ ++ RAE MLQQA++LGCRQFVT G
Sbjct: 303 FHLLNQIAPKGQKEGEPRIDINIC-----SNVPRAESMLQQADKLGCRQFVTPADVVSGN 357
Query: 1523 PR*TW-XXXXXXHRYPALHKPETQTSTGGLLK 1615
P+ ++YPAL KPE Q LL+
Sbjct: 358 PKLNLAFVANLFNKYPALTKPENQDIDWTLLE 389
Score = 65.5 bits (158), Expect = 2e-10
Identities = 34/54 (62%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Frame = +1
Query: 1504 DVVRGNPKVNLAFIATS-SQIPRPAQTRDPDIDWGALESETREERTFRNWMNSL 1662
DVV GNPK+NLAF+A ++ P + + DIDW LE ETREERTFRNWMNSL
Sbjct: 352 DVVSGNPKLNLAFVANLFNKYPALTKPENQDIDWTLLE-ETREERTFRNWMNSL 404
Score = 52.8 bits (125), Expect = 1e-06
Identities = 59/236 (25%), Positives = 96/236 (40%), Gaps = 8/236 (3%)
Frame = +2
Query: 809 EKYAFVNWINKALENDPDCRHVIPMDPNTNDLFSAVGDGIVLCKMIN-LSVPDTIDERTI 985
E+ F NW+N + ++P+ N L++ + D +V+ ++ + VP +D +
Sbjct: 393 EERTFRNWMNS-----------LGVNPHVNHLYADLQDALVILQLYERIKVP--VDWSKV 439
Query: 986 NKKKLTPFTIQENLNLALNSASAIGCH-----VVNIGAEDLKEGKPYLVLGLLWQVIKIG 1150
NK N A +G H +V IG +DL +G L L L+WQ
Sbjct: 440 NKPPYPKLGANMKKLENCNYAVELGKHPAKFSLVGIGGQDLNDGNQTLTLALVWQ----- 494
Query: 1151 LFADIELSRNEALAALLREGESLEDLMKLSPEELLLRWANYHLENAG-CNKINNF-SSDI 1324
L R L L E L D K + +++++ W N L AG I +F I
Sbjct: 495 ------LMRRYTLNVL----EDLGDGQKAN-DDIIVSWVNRTLAEAGKSTSIQSFKDKTI 543
Query: 1325 KDSKAYYHLLEQVAPKGDEEGIPAVVIDMSGLREKDDIQRAECMLQQAERLGCRQF 1492
S A L++ + P I ++ L E D A+ + A R+G R +
Sbjct: 544 SSSLAVVDLIDAIQP----GCINYDLVKSGNLTEDDKHNNAKYAVSMARRIGARVY 595
>ref|XP_863933.1| PREDICTED: similar to plastin 3 isoform 5 [Canis familiaris].
Length = 666
Score = 551 bits (1420), Expect = e-157
Identities = 283/428 (66%), Positives = 331/428 (77%), Gaps = 37/428 (8%)
Frame = +2
Query: 443 KMARGSVSDEEMMELREAFAKVDTDGNGYISCNELNDLFKAACLPLPGYRVREITENLMA 622
+MA +S +E+ EL+EAFAKVD + NG+I EL++LFK A +PLPGY+VREI + LM
Sbjct: 3 EMATTQISKDELDELKEAFAKVDLNSNGFICDYELHELFKEANMPLPGYKVREIIQKLML 62
Query: 623 TGDLDRDGRISFDEFIKVFHGLKSTEVAKTFRKAINKKEGICAIGGTSEQSSVGTQHSYS 802
GD ++DG+ISFDEF+ +F +KS+++AKTFRKAIN+KEGICA+GGTSE SS GTQHSYS
Sbjct: 63 DGDRNKDGKISFDEFVYIFQEVKSSDIAKTFRKAINRKEGICALGGTSELSSEGTQHSYS 122
Query: 803 EEEKYAFVNWINKALENDPDCRHVIPMDPNTNDLFSAVGDGIVLCKMINLSVPDTIDERT 982
EEEKYAFVNWINKALENDPDCRHVIPM+PNT+DLF AVGDGIVLCKMINLSVPDTIDER
Sbjct: 123 EEEKYAFVNWINKALENDPDCRHVIPMNPNTDDLFKAVGDGIVLCKMINLSVPDTIDERA 182
Query: 983 INKKKLTPFTIQENLNLALNSASAIGCHVVNIGAEDLKEGKPYLVLGLLWQVIKIGLFAD 1162
INKKKLTPF IQENLNLALNSASAIGCHVVNIGAEDL+ GKP+LVLGLLWQ+IKIGLFAD
Sbjct: 183 INKKKLTPFIIQENLNLALNSASAIGCHVVNIGAEDLRAGKPHLVLGLLWQIIKIGLFAD 242
Query: 1163 IELSRNE------------------------------------ALAALLREGESLEDLMK 1234
IELSRNE +LAALLR+GE+LE+LMK
Sbjct: 243 IELSRNEGNGTHPTLGSLHGACFSLCVSASLSLSLSVCVCVCVSLAALLRDGETLEELMK 302
Query: 1235 LSPEELLLRWANYHLENAGCNKINNFSSDIKDSKAYYHLLEQVAPKGDEEGIPAVVIDMS 1414
LSPEELLLRWAN+HLEN+G KINNFS+DIKDSKAY+HLL Q+APKG +EG P + I+MS
Sbjct: 303 LSPEELLLRWANFHLENSGWQKINNFSADIKDSKAYFHLLNQIAPKGQKEGEPRIDINMS 362
Query: 1415 GLREKDDIQRAECMLQQAERLGCRQFVTAPMWSEGTPR*TW-XXXXXXHRYPALHKPETQ 1591
G E DD++RAE MLQQA++LGCRQFVT G P+ ++YPAL KPE Q
Sbjct: 363 GFNETDDLKRAESMLQQADKLGCRQFVTPADVVSGNPKLNLAFVANLFNKYPALTKPENQ 422
Query: 1592 TSTGGLLK 1615
LL+
Sbjct: 423 DIDWTLLE 430
Score = 70.1 bits (170), Expect = 6e-12
Identities = 34/54 (62%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Frame = +1
Query: 1504 DVVRGNPKVNLAFIATS-SQIPRPAQTRDPDIDWGALESETREERTFRNWMNSL 1662
DVV GNPK+NLAF+A ++ P + + DIDW LE ETREERTFRNWMNSL
Sbjct: 393 DVVSGNPKLNLAFVANLFNKYPALTKPENQDIDWTLLEGETREERTFRNWMNSL 446
Score = 52.8 bits (125), Expect = 1e-06
Identities = 59/236 (25%), Positives = 96/236 (40%), Gaps = 8/236 (3%)
Frame = +2
Query: 809 EKYAFVNWINKALENDPDCRHVIPMDPNTNDLFSAVGDGIVLCKMIN-LSVPDTIDERTI 985
E+ F NW+N + ++P+ N L++ + D +V+ ++ + VP +D +
Sbjct: 435 EERTFRNWMNS-----------LGVNPHVNHLYADLQDALVILQLYERIKVP--VDWSKV 481
Query: 986 NKKKLTPFTIQENLNLALNSASAIGCH-----VVNIGAEDLKEGKPYLVLGLLWQVIKIG 1150
NK N A +G H +V IG +DL +G L L L+WQ
Sbjct: 482 NKPPYPKLGANMKKLENCNYAVELGKHPAKFSLVGIGGQDLNDGNQTLTLALVWQ----- 536
Query: 1151 LFADIELSRNEALAALLREGESLEDLMKLSPEELLLRWANYHLENAG-CNKINNF-SSDI 1324
L R L L E L D K + +++++ W N L AG I +F I
Sbjct: 537 ------LMRRYTLNVL----EDLGDGQKAN-DDIIVSWVNRTLAEAGKSTSIQSFKDKTI 585
Query: 1325 KDSKAYYHLLEQVAPKGDEEGIPAVVIDMSGLREKDDIQRAECMLQQAERLGCRQF 1492
S A L++ + P I ++ L E D A+ + A R+G R +
Sbjct: 586 SSSLAVVDLIDAIQP----GCINYDLVKSGNLTEDDKHNNAKYAVSMARRIGARVY 637
>ref|XP_863912.1| PREDICTED: similar to plastin 3 isoform 4 [Canis familiaris].
Length = 620
Score = 541 bits (1394), Expect = e-154
Identities = 276/392 (70%), Positives = 322/392 (82%), Gaps = 1/392 (0%)
Frame = +2
Query: 443 KMARGSVSDEEMMELREAFAKVDTDGNGYISCNELNDLFKAACLPLPGYRVREITENLMA 622
+MA +S +E+ EL+EAFAKVD + NG+I EL++LFK A +PLPGY+VREI + LM
Sbjct: 3 EMATTQISKDELDELKEAFAKVDLNSNGFICDYELHELFKEANMPLPGYKVREIIQKLML 62
Query: 623 TGDLDRDGRISFDEFIKVFHGLKSTEVAKTFRKAINKKEGICAIGGTSEQSSVGTQHSYS 802
GD ++DG+ISFDEF+ +F +KS+++AKTFRKAIN+KEGICA+GGTSE SS GTQHSYS
Sbjct: 63 DGDRNKDGKISFDEFVYIFQEVKSSDIAKTFRKAINRKEGICALGGTSELSSEGTQHSYS 122
Query: 803 EEEKYAFVNWINKALENDPDCRHVIPMDPNTNDLFSAVGDGIVLCKMINLSVPDTIDERT 982
EEEKYAFVNWINKALENDPDCRHVIPM+PNT+DLF AVGDGIVLCKMINLSVPDTIDER
Sbjct: 123 EEEKYAFVNWINKALENDPDCRHVIPMNPNTDDLFKAVGDGIVLCKMINLSVPDTIDERA 182
Query: 983 INKKKLTPFTIQENLNLALNSASAIGCHVVNIGAEDLKEGKPYLVLGLLWQVIKIGLFAD 1162
INKKKLTPF IQENLNLALNSASAIGCHVVNIGAEDL+ GKP+LVLGLLWQ+IKIGLFAD
Sbjct: 183 INKKKLTPFIIQENLNLALNSASAIGCHVVNIGAEDLRAGKPHLVLGLLWQIIKIGLFAD 242
Query: 1163 IELSRNEALAALLREGESLEDLMKLSPEELLLRWANYHLENAGCNKINNFSSDIKDSKAY 1342
IELSRNEALAALLR+GE+LE+LMKLSPEELLLRWAN+HLEN+G KINNFS+DIKDSKAY
Sbjct: 243 IELSRNEALAALLRDGETLEELMKLSPEELLLRWANFHLENSGWQKINNFSADIKDSKAY 302
Query: 1343 YHLLEQVAPKGDEEGIPAVVIDMSGLREKDDIQRAECMLQQAERLGCRQFVTAPMWSEGT 1522
+HLL Q+ P +V + L E DD++RAE MLQQA++LGCRQFVT G
Sbjct: 303 FHLLNQIDP---------LVCSLDPL-ETDDLKRAESMLQQADKLGCRQFVTPADVVSGN 352
Query: 1523 PR*TW-XXXXXXHRYPALHKPETQTSTGGLLK 1615
P+ ++YPAL KPE Q LL+
Sbjct: 353 PKLNLAFVANLFNKYPALTKPENQDIDWTLLE 384
Score = 70.1 bits (170), Expect = 6e-12
Identities = 34/54 (62%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Frame = +1
Query: 1504 DVVRGNPKVNLAFIATS-SQIPRPAQTRDPDIDWGALESETREERTFRNWMNSL 1662
DVV GNPK+NLAF+A ++ P + + DIDW LE ETREERTFRNWMNSL
Sbjct: 347 DVVSGNPKLNLAFVANLFNKYPALTKPENQDIDWTLLEGETREERTFRNWMNSL 400
Score = 52.8 bits (125), Expect = 1e-06
Identities = 59/236 (25%), Positives = 96/236 (40%), Gaps = 8/236 (3%)
Frame = +2
Query: 809 EKYAFVNWINKALENDPDCRHVIPMDPNTNDLFSAVGDGIVLCKMIN-LSVPDTIDERTI 985
E+ F NW+N + ++P+ N L++ + D +V+ ++ + VP +D +
Sbjct: 389 EERTFRNWMNS-----------LGVNPHVNHLYADLQDALVILQLYERIKVP--VDWSKV 435
Query: 986 NKKKLTPFTIQENLNLALNSASAIGCH-----VVNIGAEDLKEGKPYLVLGLLWQVIKIG 1150
NK N A +G H +V IG +DL +G L L L+WQ
Sbjct: 436 NKPPYPKLGANMKKLENCNYAVELGKHPAKFSLVGIGGQDLNDGNQTLTLALVWQ----- 490
Query: 1151 LFADIELSRNEALAALLREGESLEDLMKLSPEELLLRWANYHLENAG-CNKINNF-SSDI 1324
L R L L E L D K + +++++ W N L AG I +F I
Sbjct: 491 ------LMRRYTLNVL----EDLGDGQKAN-DDIIVSWVNRTLAEAGKSTSIQSFKDKTI 539
Query: 1325 KDSKAYYHLLEQVAPKGDEEGIPAVVIDMSGLREKDDIQRAECMLQQAERLGCRQF 1492
S A L++ + P I ++ L E D A+ + A R+G R +
Sbjct: 540 SSSLAVVDLIDAIQP----GCINYDLVKSGNLTEDDKHNNAKYAVSMARRIGARVY 591
>ref|XP_542817.2| PREDICTED: similar to I-plastin (Intestine-specific plastin)
(Plastin-1) [Canis familiaris].
Length = 767
Score = 517 bits (1332), Expect = e-146
Identities = 253/376 (67%), Positives = 304/376 (80%), Gaps = 1/376 (0%)
Frame = +2
Query: 461 VSDEEMMELREAFAKVDTDGNGYISCNELNDLFKAACLPLPGYRVREITENLMATGDLDR 640
+S EE+ EL+EAF K+D D +GY+S EL DLFK A LPLPGY+VREI E ++A D ++
Sbjct: 146 ISREELEELQEAFNKIDIDNSGYVSDYELQDLFKEASLPLPGYKVREIVEKILAVADNNK 205
Query: 641 DGRISFDEFIKVFHGLKSTEVAKTFRKAINKKEGICAIGGTSEQSSVGTQHSYSEEEKYA 820
DG+I+F+EF+ + LKS +++KTFRK INK+EGI AIGGTS SS GTQHSYSEEEK A
Sbjct: 206 DGKITFEEFVSLMQELKSKDISKTFRKIINKREGITAIGGTSSISSEGTQHSYSEEEKVA 265
Query: 821 FVNWINKALENDPDCRHVIPMDPNTNDLFSAVGDGIVLCKMINLSVPDTIDERTINKKKL 1000
FVNWINKALE+DPDC+H++PM+P+ LF ++ DGI+LCKMINLS PDTIDER INKKKL
Sbjct: 266 FVNWINKALEDDPDCKHLLPMNPSDGSLFKSLADGILLCKMINLSEPDTIDERAINKKKL 325
Query: 1001 TPFTIQENLNLALNSASAIGCHVVNIGAEDLKEGKPYLVLGLLWQVIKIGLFADIELSRN 1180
TPFTI ENLNLALNSASAIGC VVNIGA+DLKEGKP+LVLGLLWQ+IK+GL ADIE+SRN
Sbjct: 326 TPFTISENLNLALNSASAIGCTVVNIGAQDLKEGKPHLVLGLLWQIIKVGLLADIEISRN 385
Query: 1181 EALAALLREGESLEDLMKLSPEELLLRWANYHLENAGCNKINNFSSDIKDSKAYYHLLEQ 1360
EAL ALL+EGE LE+LMKLSPEELLLRW NYHL NAG INNFS DIKDS+AY+HLL Q
Sbjct: 386 EALIALLKEGEDLEELMKLSPEELLLRWVNYHLTNAGWPNINNFSQDIKDSRAYFHLLNQ 445
Query: 1361 VAPKGDEEGIPAVVIDMSGLREKDDIQRAECMLQQAERLGCRQFVTAPMWSEGTPR*TW- 1537
+APKGD+ PA+ ID+SG EK+D++RA MLQ+A++LGCRQFVT G P+
Sbjct: 446 IAPKGDQGDEPAITIDLSGFNEKNDLKRAGFMLQEADKLGCRQFVTPADVVSGNPKLNLA 505
Query: 1538 XXXXXXHRYPALHKPE 1585
+ YP LHKP+
Sbjct: 506 FVANLFNTYPCLHKPD 521
Score = 61.6 bits (148), Expect = 2e-09
Identities = 31/53 (58%), Positives = 35/53 (66%)
Frame = +1
Query: 1504 DVVRGNPKVNLAFIATSSQIPRPAQTRDPDIDWGALESETREERTFRNWMNSL 1662
DVV GNPK+NLAF+A D DID LE E++EERTFRNWMNSL
Sbjct: 494 DVVSGNPKLNLAFVANLFNTYPCLHKPDNDIDINLLEGESKEERTFRNWMNSL 546
Score = 52.0 bits (123), Expect = 2e-06
Identities = 54/237 (22%), Positives = 101/237 (42%), Gaps = 10/237 (4%)
Frame = +2
Query: 806 EEKYAFVNWINKALENDPDCRHVIPMDPNTNDLFSAVGDGIVLCKMINLSVPDTIDERTI 985
+E+ F NW+N + ++P N L+S + D +V+ ++ + + + +
Sbjct: 534 KEERTFRNWMNS-----------LGVNPYINHLYSDLADALVIFQLYEM-IRVPVKWSRV 581
Query: 986 NKKKLTPFTIQ----ENLNLALN-SASAIGCHVVNIGAEDLKEGKPYLVLGLLWQVIK-- 1144
NK EN N A+ + +V I +DL EG L L L+WQ+++
Sbjct: 582 NKPPYPALGGNMKKIENCNYAVELGKTEAKFSLVGIAGQDLNEGNSTLTLALVWQLMRRY 641
Query: 1145 -IGLFADIELSRNEALAALLREGESLEDLMKLSPEELLLRWANYHLENA-GCNKINNF-S 1315
+ + +D L EGE + D E++++W N L++A I++F
Sbjct: 642 TLNVLSD------------LGEGEKVND-------EIIIKWVNETLKSAQKPTSISSFKD 682
Query: 1316 SDIKDSKAYYHLLEQVAPKGDEEGIPAVVIDMSGLREKDDIQRAECMLQQAERLGCR 1486
I S L++ +AP + +I L E+D + A+ + A ++G R
Sbjct: 683 KTISTSLPVLDLIDAIAP----NAVRQEMIKRENLSEEDKLNNAKYAISVARKIGAR 735
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 66,516,794
Number of extensions: 1767271
Number of successful extensions: 5617
Number of sequences better than 1.0e-05: 44
Number of HSP's gapped: 5495
Number of HSP's successfully gapped: 63
Length of query: 560
Length of database: 18,874,504
Length adjustment: 108
Effective length of query: 452
Effective length of database: 15,274,216
Effective search space: 6903945632
Effective search space used: 6903945632
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007283
(1681 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_002289.2| plastin-2 [Homo sapiens]. 707 0.0
Alignment gi|NP_001129497.1| plastin-3 isoform 1 [Homo sapiens]. 570 e-162
Alignment gi|NP_005023.2| plastin-3 isoform 1 [Homo sapiens]. 570 e-162
Alignment gi|NP_001165806.1| plastin-3 isoform 2 [Homo sapiens]. 524 e-149
Alignment gi|NP_001165783.1| plastin-1 [Homo sapiens]. 519 e-147
Alignment gi|NP_001138791.1| plastin-1 [Homo sapiens]. 519 e-147
Alignment gi|NP_002661.2| plastin-1 [Homo sapiens]. 519 e-147
Alignment gi|NP_958786.1| plectin isoform 1a [Homo sapiens]. 65 2e-10
Alignment gi|NP_036222.3| microtubule-actin cross-linking factor 1 isofor... 65 2e-10
Alignment gi|NP_000436.2| plectin isoform 1c [Homo sapiens]. 63 7e-10
>ref|NP_002289.2| plastin-2 [Homo sapiens].
Length = 627
Score = 707 bits (1824), Expect = 0.0
Identities = 356/391 (91%), Positives = 366/391 (93%), Gaps = 1/391 (0%)
Frame = +2
Query: 446 MARGSVSDEEMMELREAFAKVDTDGNGYISCNELNDLFKAACLPLPGYRVREITENLMAT 625
MARGSVSDEEMMELREAFAKVDTDGNGYIS NELNDLFKAACLPLPGYRVREITENLMAT
Sbjct: 1 MARGSVSDEEMMELREAFAKVDTDGNGYISFNELNDLFKAACLPLPGYRVREITENLMAT 60
Query: 626 GDLDRDGRISFDEFIKVFHGLKSTEVAKTFRKAINKKEGICAIGGTSEQSSVGTQHSYSE 805
GDLD+DGRISFDEFIK+FHGLKST+VAKTFRKAINKKEGICAIGGTSEQSSVGTQHSYSE
Sbjct: 61 GDLDQDGRISFDEFIKIFHGLKSTDVAKTFRKAINKKEGICAIGGTSEQSSVGTQHSYSE 120
Query: 806 EEKYAFVNWINKALENDPDCRHVIPMDPNTNDLFSAVGDGIVLCKMINLSVPDTIDERTI 985
EEKYAFVNWINKALENDPDCRHVIPM+PNTNDLF+AVGDGIVLCKMINLSVPDTIDERTI
Sbjct: 121 EEKYAFVNWINKALENDPDCRHVIPMNPNTNDLFNAVGDGIVLCKMINLSVPDTIDERTI 180
Query: 986 NKKKLTPFTIQENLNLALNSASAIGCHVVNIGAEDLKEGKPYLVLGLLWQVIKIGLFADI 1165
NKKKLTPFTIQENLNLALNSASAIGCHVVNIGAEDLKEGKPYLVLGLLWQVIKIGLFADI
Sbjct: 181 NKKKLTPFTIQENLNLALNSASAIGCHVVNIGAEDLKEGKPYLVLGLLWQVIKIGLFADI 240
Query: 1166 ELSRNEALAALLREGESLEDLMKLSPEELLLRWANYHLENAGCNKINNFSSDIKDSKAYY 1345
ELSRNEAL ALLREGESLEDLMKLSPEELLLRWANYHLENAGCNKI NFS+DIKDSKAYY
Sbjct: 241 ELSRNEALIALLREGESLEDLMKLSPEELLLRWANYHLENAGCNKIGNFSTDIKDSKAYY 300
Query: 1346 HLLEQVAPKGDEEGIPAVVIDMSGLREKDDIQRAECMLQQAERLGCRQFVTAPMWSEGTP 1525
HLLEQVAPKGDEEG+PAVVIDMSGLREKDDIQRAECMLQQAERLGCRQFVTA G P
Sbjct: 301 HLLEQVAPKGDEEGVPAVVIDMSGLREKDDIQRAECMLQQAERLGCRQFVTATDVVRGNP 360
Query: 1526 R*TW-XXXXXXHRYPALHKPETQTSTGGLLK 1615
+ +RYPALHKPE Q G L+
Sbjct: 361 KLNLAFIANLFNRYPALHKPENQDIDWGALE 391
Score = 81.3 bits (199), Expect = 3e-15
Identities = 41/62 (66%), Positives = 47/62 (75%), Gaps = 1/62 (1%)
Frame = +1
Query: 1498 STDVVRGNPKVNLAFIATS-SQIPRPAQTRDPDIDWGALESETREERTFRNWMNSLXCXX 1674
+TDVVRGNPK+NLAFIA ++ P + + DIDWGALE ETREERTFRNWMNSL
Sbjct: 352 ATDVVRGNPKLNLAFIANLFNRYPALHKPENQDIDWGALEGETREERTFRNWMNSLGVNP 411
Query: 1675 RV 1680
RV
Sbjct: 412 RV 413
>ref|NP_001129497.1| plastin-3 isoform 1 [Homo sapiens].
Length = 630
Score = 570 bits (1470), Expect = e-162
Identities = 284/392 (72%), Positives = 331/392 (84%), Gaps = 1/392 (0%)
Frame = +2
Query: 443 KMARGSVSDEEMMELREAFAKVDTDGNGYISCNELNDLFKAACLPLPGYRVREITENLMA 622
+MA +S +E+ EL+EAFAKVD + NG+I EL++LFK A +PLPGY+VREI + LM
Sbjct: 3 EMATTQISKDELDELKEAFAKVDLNSNGFICDYELHELFKEANMPLPGYKVREIIQKLML 62
Query: 623 TGDLDRDGRISFDEFIKVFHGLKSTEVAKTFRKAINKKEGICAIGGTSEQSSVGTQHSYS 802
GD ++DG+ISFDEF+ +F +KS+++AKTFRKAIN+KEGICA+GGTSE SS GTQHSYS
Sbjct: 63 DGDRNKDGKISFDEFVYIFQEVKSSDIAKTFRKAINRKEGICALGGTSELSSEGTQHSYS 122
Query: 803 EEEKYAFVNWINKALENDPDCRHVIPMDPNTNDLFSAVGDGIVLCKMINLSVPDTIDERT 982
EEEKYAFVNWINKALENDPDCRHVIPM+PNT+DLF AVGDGIVLCKMINLSVPDTIDER
Sbjct: 123 EEEKYAFVNWINKALENDPDCRHVIPMNPNTDDLFKAVGDGIVLCKMINLSVPDTIDERA 182
Query: 983 INKKKLTPFTIQENLNLALNSASAIGCHVVNIGAEDLKEGKPYLVLGLLWQVIKIGLFAD 1162
INKKKLTPF IQENLNLALNSASAIGCHVVNIGAEDL+ GKP+LVLGLLWQ+IKIGLFAD
Sbjct: 183 INKKKLTPFIIQENLNLALNSASAIGCHVVNIGAEDLRAGKPHLVLGLLWQIIKIGLFAD 242
Query: 1163 IELSRNEALAALLREGESLEDLMKLSPEELLLRWANYHLENAGCNKINNFSSDIKDSKAY 1342
IELSRNEALAALLR+GE+LE+LMKLSPEELLLRWAN+HLEN+G KINNFS+DIKDSKAY
Sbjct: 243 IELSRNEALAALLRDGETLEELMKLSPEELLLRWANFHLENSGWQKINNFSADIKDSKAY 302
Query: 1343 YHLLEQVAPKGDEEGIPAVVIDMSGLREKDDIQRAECMLQQAERLGCRQFVTAPMWSEGT 1522
+HLL Q+APKG +EG P + I+MSG E DD++RAE MLQQA++LGCRQFVT G
Sbjct: 303 FHLLNQIAPKGQKEGEPRIDINMSGFNETDDLKRAESMLQQADKLGCRQFVTPADVVSGN 362
Query: 1523 PR*TW-XXXXXXHRYPALHKPETQTSTGGLLK 1615
P+ ++YPAL KPE Q LL+
Sbjct: 363 PKLNLAFVANLFNKYPALTKPENQDIDWTLLE 394
Score = 70.1 bits (170), Expect = 6e-12
Identities = 34/54 (62%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Frame = +1
Query: 1504 DVVRGNPKVNLAFIATS-SQIPRPAQTRDPDIDWGALESETREERTFRNWMNSL 1662
DVV GNPK+NLAF+A ++ P + + DIDW LE ETREERTFRNWMNSL
Sbjct: 357 DVVSGNPKLNLAFVANLFNKYPALTKPENQDIDWTLLEGETREERTFRNWMNSL 410
Score = 53.5 bits (127), Expect = 6e-07
Identities = 59/236 (25%), Positives = 96/236 (40%), Gaps = 8/236 (3%)
Frame = +2
Query: 809 EKYAFVNWINKALENDPDCRHVIPMDPNTNDLFSAVGDGIVLCKMIN-LSVPDTIDERTI 985
E+ F NW+N + ++P+ N L++ + D +V+ ++ + VP +D +
Sbjct: 399 EERTFRNWMNS-----------LGVNPHVNHLYADLQDALVILQLYERIKVP--VDWSKV 445
Query: 986 NKKKLTPFTIQENLNLALNSASAIGCH-----VVNIGAEDLKEGKPYLVLGLLWQVIKIG 1150
NK N A +G H +V IG +DL +G L L L+WQ
Sbjct: 446 NKPPYPKLGANMKKLENCNYAVELGKHPAKFSLVGIGGQDLNDGNQTLTLALVWQ----- 500
Query: 1151 LFADIELSRNEALAALLREGESLEDLMKLSPEELLLRWANYHLENAG-CNKINNF-SSDI 1324
L R L L E L D K + +++++ W N L AG I +F I
Sbjct: 501 ------LMRRYTLNVL----EDLGDGQKAN-DDIIVNWVNRTLSEAGKSTSIQSFKDKTI 549
Query: 1325 KDSKAYYHLLEQVAPKGDEEGIPAVVIDMSGLREKDDIQRAECMLQQAERLGCRQF 1492
S A L++ + P I ++ L E D A+ + A R+G R +
Sbjct: 550 SSSLAVVDLIDAIQP----GCINYDLVKSGNLTEDDKHNNAKYAVSMARRIGARVY 601
>ref|NP_005023.2| plastin-3 isoform 1 [Homo sapiens].
Length = 630
Score = 570 bits (1470), Expect = e-162
Identities = 284/392 (72%), Positives = 331/392 (84%), Gaps = 1/392 (0%)
Frame = +2
Query: 443 KMARGSVSDEEMMELREAFAKVDTDGNGYISCNELNDLFKAACLPLPGYRVREITENLMA 622
+MA +S +E+ EL+EAFAKVD + NG+I EL++LFK A +PLPGY+VREI + LM
Sbjct: 3 EMATTQISKDELDELKEAFAKVDLNSNGFICDYELHELFKEANMPLPGYKVREIIQKLML 62
Query: 623 TGDLDRDGRISFDEFIKVFHGLKSTEVAKTFRKAINKKEGICAIGGTSEQSSVGTQHSYS 802
GD ++DG+ISFDEF+ +F +KS+++AKTFRKAIN+KEGICA+GGTSE SS GTQHSYS
Sbjct: 63 DGDRNKDGKISFDEFVYIFQEVKSSDIAKTFRKAINRKEGICALGGTSELSSEGTQHSYS 122
Query: 803 EEEKYAFVNWINKALENDPDCRHVIPMDPNTNDLFSAVGDGIVLCKMINLSVPDTIDERT 982
EEEKYAFVNWINKALENDPDCRHVIPM+PNT+DLF AVGDGIVLCKMINLSVPDTIDER
Sbjct: 123 EEEKYAFVNWINKALENDPDCRHVIPMNPNTDDLFKAVGDGIVLCKMINLSVPDTIDERA 182
Query: 983 INKKKLTPFTIQENLNLALNSASAIGCHVVNIGAEDLKEGKPYLVLGLLWQVIKIGLFAD 1162
INKKKLTPF IQENLNLALNSASAIGCHVVNIGAEDL+ GKP+LVLGLLWQ+IKIGLFAD
Sbjct: 183 INKKKLTPFIIQENLNLALNSASAIGCHVVNIGAEDLRAGKPHLVLGLLWQIIKIGLFAD 242
Query: 1163 IELSRNEALAALLREGESLEDLMKLSPEELLLRWANYHLENAGCNKINNFSSDIKDSKAY 1342
IELSRNEALAALLR+GE+LE+LMKLSPEELLLRWAN+HLEN+G KINNFS+DIKDSKAY
Sbjct: 243 IELSRNEALAALLRDGETLEELMKLSPEELLLRWANFHLENSGWQKINNFSADIKDSKAY 302
Query: 1343 YHLLEQVAPKGDEEGIPAVVIDMSGLREKDDIQRAECMLQQAERLGCRQFVTAPMWSEGT 1522
+HLL Q+APKG +EG P + I+MSG E DD++RAE MLQQA++LGCRQFVT G
Sbjct: 303 FHLLNQIAPKGQKEGEPRIDINMSGFNETDDLKRAESMLQQADKLGCRQFVTPADVVSGN 362
Query: 1523 PR*TW-XXXXXXHRYPALHKPETQTSTGGLLK 1615
P+ ++YPAL KPE Q LL+
Sbjct: 363 PKLNLAFVANLFNKYPALTKPENQDIDWTLLE 394
Score = 70.1 bits (170), Expect = 6e-12
Identities = 34/54 (62%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Frame = +1
Query: 1504 DVVRGNPKVNLAFIATS-SQIPRPAQTRDPDIDWGALESETREERTFRNWMNSL 1662
DVV GNPK+NLAF+A ++ P + + DIDW LE ETREERTFRNWMNSL
Sbjct: 357 DVVSGNPKLNLAFVANLFNKYPALTKPENQDIDWTLLEGETREERTFRNWMNSL 410
Score = 53.5 bits (127), Expect = 6e-07
Identities = 59/236 (25%), Positives = 96/236 (40%), Gaps = 8/236 (3%)
Frame = +2
Query: 809 EKYAFVNWINKALENDPDCRHVIPMDPNTNDLFSAVGDGIVLCKMIN-LSVPDTIDERTI 985
E+ F NW+N + ++P+ N L++ + D +V+ ++ + VP +D +
Sbjct: 399 EERTFRNWMNS-----------LGVNPHVNHLYADLQDALVILQLYERIKVP--VDWSKV 445
Query: 986 NKKKLTPFTIQENLNLALNSASAIGCH-----VVNIGAEDLKEGKPYLVLGLLWQVIKIG 1150
NK N A +G H +V IG +DL +G L L L+WQ
Sbjct: 446 NKPPYPKLGANMKKLENCNYAVELGKHPAKFSLVGIGGQDLNDGNQTLTLALVWQ----- 500
Query: 1151 LFADIELSRNEALAALLREGESLEDLMKLSPEELLLRWANYHLENAG-CNKINNF-SSDI 1324
L R L L E L D K + +++++ W N L AG I +F I
Sbjct: 501 ------LMRRYTLNVL----EDLGDGQKAN-DDIIVNWVNRTLSEAGKSTSIQSFKDKTI 549
Query: 1325 KDSKAYYHLLEQVAPKGDEEGIPAVVIDMSGLREKDDIQRAECMLQQAERLGCRQF 1492
S A L++ + P I ++ L E D A+ + A R+G R +
Sbjct: 550 SSSLAVVDLIDAIQP----GCINYDLVKSGNLTEDDKHNNAKYAVSMARRIGARVY 601
>ref|NP_001165806.1| plastin-3 isoform 2 [Homo sapiens].
Length = 603
Score = 524 bits (1350), Expect = e-149
Identities = 269/392 (68%), Positives = 310/392 (79%), Gaps = 1/392 (0%)
Frame = +2
Query: 443 KMARGSVSDEEMMELREAFAKVDTDGNGYISCNELNDLFKAACLPLPGYRVREITENLMA 622
+MA +S +E+ EL+EAFAKVD + NG+I EL++LFK A +PLPGY
Sbjct: 3 EMATTQISKDELDELKEAFAKVDLNSNGFICDYELHELFKEANMPLPGY----------- 51
Query: 623 TGDLDRDGRISFDEFIKVFHGLKSTEVAKTFRKAINKKEGICAIGGTSEQSSVGTQHSYS 802
K+F +KS+++AKTFRKAIN+KEGICA+GGTSE SS GTQHSYS
Sbjct: 52 ----------------KIFQEVKSSDIAKTFRKAINRKEGICALGGTSELSSEGTQHSYS 95
Query: 803 EEEKYAFVNWINKALENDPDCRHVIPMDPNTNDLFSAVGDGIVLCKMINLSVPDTIDERT 982
EEEKYAFVNWINKALENDPDCRHVIPM+PNT+DLF AVGDGIVLCKMINLSVPDTIDER
Sbjct: 96 EEEKYAFVNWINKALENDPDCRHVIPMNPNTDDLFKAVGDGIVLCKMINLSVPDTIDERA 155
Query: 983 INKKKLTPFTIQENLNLALNSASAIGCHVVNIGAEDLKEGKPYLVLGLLWQVIKIGLFAD 1162
INKKKLTPF IQENLNLALNSASAIGCHVVNIGAEDL+ GKP+LVLGLLWQ+IKIGLFAD
Sbjct: 156 INKKKLTPFIIQENLNLALNSASAIGCHVVNIGAEDLRAGKPHLVLGLLWQIIKIGLFAD 215
Query: 1163 IELSRNEALAALLREGESLEDLMKLSPEELLLRWANYHLENAGCNKINNFSSDIKDSKAY 1342
IELSRNEALAALLR+GE+LE+LMKLSPEELLLRWAN+HLEN+G KINNFS+DIKDSKAY
Sbjct: 216 IELSRNEALAALLRDGETLEELMKLSPEELLLRWANFHLENSGWQKINNFSADIKDSKAY 275
Query: 1343 YHLLEQVAPKGDEEGIPAVVIDMSGLREKDDIQRAECMLQQAERLGCRQFVTAPMWSEGT 1522
+HLL Q+APKG +EG P + I+MSG E DD++RAE MLQQA++LGCRQFVT G
Sbjct: 276 FHLLNQIAPKGQKEGEPRIDINMSGFNETDDLKRAESMLQQADKLGCRQFVTPADVVSGN 335
Query: 1523 PR*TW-XXXXXXHRYPALHKPETQTSTGGLLK 1615
P+ ++YPAL KPE Q LL+
Sbjct: 336 PKLNLAFVANLFNKYPALTKPENQDIDWTLLE 367
Score = 70.1 bits (170), Expect = 6e-12
Identities = 34/54 (62%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Frame = +1
Query: 1504 DVVRGNPKVNLAFIATS-SQIPRPAQTRDPDIDWGALESETREERTFRNWMNSL 1662
DVV GNPK+NLAF+A ++ P + + DIDW LE ETREERTFRNWMNSL
Sbjct: 330 DVVSGNPKLNLAFVANLFNKYPALTKPENQDIDWTLLEGETREERTFRNWMNSL 383
Score = 53.5 bits (127), Expect = 6e-07
Identities = 59/236 (25%), Positives = 96/236 (40%), Gaps = 8/236 (3%)
Frame = +2
Query: 809 EKYAFVNWINKALENDPDCRHVIPMDPNTNDLFSAVGDGIVLCKMIN-LSVPDTIDERTI 985
E+ F NW+N + ++P+ N L++ + D +V+ ++ + VP +D +
Sbjct: 372 EERTFRNWMNS-----------LGVNPHVNHLYADLQDALVILQLYERIKVP--VDWSKV 418
Query: 986 NKKKLTPFTIQENLNLALNSASAIGCH-----VVNIGAEDLKEGKPYLVLGLLWQVIKIG 1150
NK N A +G H +V IG +DL +G L L L+WQ
Sbjct: 419 NKPPYPKLGANMKKLENCNYAVELGKHPAKFSLVGIGGQDLNDGNQTLTLALVWQ----- 473
Query: 1151 LFADIELSRNEALAALLREGESLEDLMKLSPEELLLRWANYHLENAG-CNKINNF-SSDI 1324
L R L L E L D K + +++++ W N L AG I +F I
Sbjct: 474 ------LMRRYTLNVL----EDLGDGQKAN-DDIIVNWVNRTLSEAGKSTSIQSFKDKTI 522
Query: 1325 KDSKAYYHLLEQVAPKGDEEGIPAVVIDMSGLREKDDIQRAECMLQQAERLGCRQF 1492
S A L++ + P I ++ L E D A+ + A R+G R +
Sbjct: 523 SSSLAVVDLIDAIQP----GCINYDLVKSGNLTEDDKHNNAKYAVSMARRIGARVY 574
>ref|NP_001165783.1| plastin-1 [Homo sapiens].
Length = 629
Score = 519 bits (1337), Expect = e-147
Identities = 257/387 (66%), Positives = 309/387 (79%), Gaps = 1/387 (0%)
Frame = +2
Query: 458 SVSDEEMMELREAFAKVDTDGNGYISCNELNDLFKAACLPLPGYRVREITENLMATGDLD 637
++S EE+ EL+EAF K+D D +GY+S EL DLFK A LPLPGY+VREI E +++ D +
Sbjct: 7 TISREELEELQEAFNKIDIDNSGYVSDYELQDLFKEASLPLPGYKVREIVEKILSVADSN 66
Query: 638 RDGRISFDEFIKVFHGLKSTEVAKTFRKAINKKEGICAIGGTSEQSSVGTQHSYSEEEKY 817
+DG+ISF+EF+ + LKS +++KTFRK INK+EGI AIGGTS SS GTQHSYSEEEK
Sbjct: 67 KDGKISFEEFVSLMQELKSKDISKTFRKIINKREGITAIGGTSTISSEGTQHSYSEEEKV 126
Query: 818 AFVNWINKALENDPDCRHVIPMDPNTNDLFSAVGDGIVLCKMINLSVPDTIDERTINKKK 997
AFVNWINKALENDPDC+H+IPM+PN + LF ++ DGI+LCKMINLS PDTIDER INKKK
Sbjct: 127 AFVNWINKALENDPDCKHLIPMNPNDDSLFKSLADGILLCKMINLSEPDTIDERAINKKK 186
Query: 998 LTPFTIQENLNLALNSASAIGCHVVNIGAEDLKEGKPYLVLGLLWQVIKIGLFADIELSR 1177
LTPFTI ENLNLALNSASAIGC VVNIGA DLKEGKP+LVLGLLWQ+IK+GLFADIE+SR
Sbjct: 187 LTPFTISENLNLALNSASAIGCTVVNIGASDLKEGKPHLVLGLLWQIIKVGLFADIEISR 246
Query: 1178 NEALAALLREGESLEDLMKLSPEELLLRWANYHLENAGCNKINNFSSDIKDSKAYYHLLE 1357
NEAL ALL EGE LE+LMKLSPEELLLRW NYHL NAG + I+NFS DIKDS+AY+HLL
Sbjct: 247 NEALIALLNEGEELEELMKLSPEELLLRWVNYHLTNAGWHTISNFSQDIKDSRAYFHLLN 306
Query: 1358 QVAPKGDEEGIPAVVIDMSGLREKDDIQRAECMLQQAERLGCRQFVTAPMWSEGTPR*TW 1537
Q+APKG E+G PA+ ID+SG+ E +D++RA MLQ+A++LGC+QFVT G P+
Sbjct: 307 QIAPKGGEDG-PAIAIDLSGINETNDLKRAGLMLQEADKLGCKQFVTPADVVSGNPKLNL 365
Query: 1538 -XXXXXXHRYPALHKPETQTSTGGLLK 1615
+ YP LHKP LL+
Sbjct: 366 AFVANLFNTYPCLHKPNNNDIDMNLLE 392
Score = 60.8 bits (146), Expect = 4e-09
Identities = 31/54 (57%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Frame = +1
Query: 1504 DVVRGNPKVNLAFIATS-SQIPRPAQTRDPDIDWGALESETREERTFRNWMNSL 1662
DVV GNPK+NLAF+A + P + + DID LE E++EERTFRNWMNSL
Sbjct: 355 DVVSGNPKLNLAFVANLFNTYPCLHKPNNNDIDMNLLEGESKEERTFRNWMNSL 408
Score = 53.9 bits (128), Expect = 4e-07
Identities = 55/239 (23%), Positives = 103/239 (43%), Gaps = 12/239 (5%)
Frame = +2
Query: 806 EEKYAFVNWINKALENDPDCRHVIPMDPNTNDLFSAVGDGIVLCKMINLSVPDTIDERTI 985
+E+ F NW+N + ++P N L+S + D +V+ ++ + + ++ +
Sbjct: 396 KEERTFRNWMNS-----------LGVNPYINHLYSDLADALVIFQLYEM-IRVPVNWSHV 443
Query: 986 NKKKLTPFTIQ----ENLNLALN-SASAIGCHVVNIGAEDLKEGKPYLVLGLLWQVIK-- 1144
NK EN N A+ + +V I +DL EG L L L+WQ+++
Sbjct: 444 NKPPYPALGGNMKKIENCNYAVELGKNKAKFSLVGIAGQDLNEGNSTLTLALVWQLMRRY 503
Query: 1145 -IGLFADIELSRNEALAALLREGESLEDLMKLSPEELLLRWANYHLENAGCNKINNFSS- 1318
+ + +D L EGE + D E++++W N L++A NK + SS
Sbjct: 504 TLNVLSD------------LGEGEKVND-------EIIIKWVNQTLKSA--NKKTSISSF 542
Query: 1319 ---DIKDSKAYYHLLEQVAPKGDEEGIPAVVIDMSGLREKDDIQRAECMLQQAERLGCR 1486
I S L++ +AP + +I L ++D + A+ + A ++G R
Sbjct: 543 KDKSISTSLPVLDLIDAIAP----NAVRQEMIRRENLSDEDKLNNAKYAISVARKIGAR 597
>ref|NP_001138791.1| plastin-1 [Homo sapiens].
Length = 629
Score = 519 bits (1337), Expect = e-147
Identities = 257/387 (66%), Positives = 309/387 (79%), Gaps = 1/387 (0%)
Frame = +2
Query: 458 SVSDEEMMELREAFAKVDTDGNGYISCNELNDLFKAACLPLPGYRVREITENLMATGDLD 637
++S EE+ EL+EAF K+D D +GY+S EL DLFK A LPLPGY+VREI E +++ D +
Sbjct: 7 TISREELEELQEAFNKIDIDNSGYVSDYELQDLFKEASLPLPGYKVREIVEKILSVADSN 66
Query: 638 RDGRISFDEFIKVFHGLKSTEVAKTFRKAINKKEGICAIGGTSEQSSVGTQHSYSEEEKY 817
+DG+ISF+EF+ + LKS +++KTFRK INK+EGI AIGGTS SS GTQHSYSEEEK
Sbjct: 67 KDGKISFEEFVSLMQELKSKDISKTFRKIINKREGITAIGGTSTISSEGTQHSYSEEEKV 126
Query: 818 AFVNWINKALENDPDCRHVIPMDPNTNDLFSAVGDGIVLCKMINLSVPDTIDERTINKKK 997
AFVNWINKALENDPDC+H+IPM+PN + LF ++ DGI+LCKMINLS PDTIDER INKKK
Sbjct: 127 AFVNWINKALENDPDCKHLIPMNPNDDSLFKSLADGILLCKMINLSEPDTIDERAINKKK 186
Query: 998 LTPFTIQENLNLALNSASAIGCHVVNIGAEDLKEGKPYLVLGLLWQVIKIGLFADIELSR 1177
LTPFTI ENLNLALNSASAIGC VVNIGA DLKEGKP+LVLGLLWQ+IK+GLFADIE+SR
Sbjct: 187 LTPFTISENLNLALNSASAIGCTVVNIGASDLKEGKPHLVLGLLWQIIKVGLFADIEISR 246
Query: 1178 NEALAALLREGESLEDLMKLSPEELLLRWANYHLENAGCNKINNFSSDIKDSKAYYHLLE 1357
NEAL ALL EGE LE+LMKLSPEELLLRW NYHL NAG + I+NFS DIKDS+AY+HLL
Sbjct: 247 NEALIALLNEGEELEELMKLSPEELLLRWVNYHLTNAGWHTISNFSQDIKDSRAYFHLLN 306
Query: 1358 QVAPKGDEEGIPAVVIDMSGLREKDDIQRAECMLQQAERLGCRQFVTAPMWSEGTPR*TW 1537
Q+APKG E+G PA+ ID+SG+ E +D++RA MLQ+A++LGC+QFVT G P+
Sbjct: 307 QIAPKGGEDG-PAIAIDLSGINETNDLKRAGLMLQEADKLGCKQFVTPADVVSGNPKLNL 365
Query: 1538 -XXXXXXHRYPALHKPETQTSTGGLLK 1615
+ YP LHKP LL+
Sbjct: 366 AFVANLFNTYPCLHKPNNNDIDMNLLE 392
Score = 60.8 bits (146), Expect = 4e-09
Identities = 31/54 (57%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Frame = +1
Query: 1504 DVVRGNPKVNLAFIATS-SQIPRPAQTRDPDIDWGALESETREERTFRNWMNSL 1662
DVV GNPK+NLAF+A + P + + DID LE E++EERTFRNWMNSL
Sbjct: 355 DVVSGNPKLNLAFVANLFNTYPCLHKPNNNDIDMNLLEGESKEERTFRNWMNSL 408
Score = 53.9 bits (128), Expect = 4e-07
Identities = 55/239 (23%), Positives = 103/239 (43%), Gaps = 12/239 (5%)
Frame = +2
Query: 806 EEKYAFVNWINKALENDPDCRHVIPMDPNTNDLFSAVGDGIVLCKMINLSVPDTIDERTI 985
+E+ F NW+N + ++P N L+S + D +V+ ++ + + ++ +
Sbjct: 396 KEERTFRNWMNS-----------LGVNPYINHLYSDLADALVIFQLYEM-IRVPVNWSHV 443
Query: 986 NKKKLTPFTIQ----ENLNLALN-SASAIGCHVVNIGAEDLKEGKPYLVLGLLWQVIK-- 1144
NK EN N A+ + +V I +DL EG L L L+WQ+++
Sbjct: 444 NKPPYPALGGNMKKIENCNYAVELGKNKAKFSLVGIAGQDLNEGNSTLTLALVWQLMRRY 503
Query: 1145 -IGLFADIELSRNEALAALLREGESLEDLMKLSPEELLLRWANYHLENAGCNKINNFSS- 1318
+ + +D L EGE + D E++++W N L++A NK + SS
Sbjct: 504 TLNVLSD------------LGEGEKVND-------EIIIKWVNQTLKSA--NKKTSISSF 542
Query: 1319 ---DIKDSKAYYHLLEQVAPKGDEEGIPAVVIDMSGLREKDDIQRAECMLQQAERLGCR 1486
I S L++ +AP + +I L ++D + A+ + A ++G R
Sbjct: 543 KDKSISTSLPVLDLIDAIAP----NAVRQEMIRRENLSDEDKLNNAKYAISVARKIGAR 597
>ref|NP_002661.2| plastin-1 [Homo sapiens].
Length = 629
Score = 519 bits (1337), Expect = e-147
Identities = 257/387 (66%), Positives = 309/387 (79%), Gaps = 1/387 (0%)
Frame = +2
Query: 458 SVSDEEMMELREAFAKVDTDGNGYISCNELNDLFKAACLPLPGYRVREITENLMATGDLD 637
++S EE+ EL+EAF K+D D +GY+S EL DLFK A LPLPGY+VREI E +++ D +
Sbjct: 7 TISREELEELQEAFNKIDIDNSGYVSDYELQDLFKEASLPLPGYKVREIVEKILSVADSN 66
Query: 638 RDGRISFDEFIKVFHGLKSTEVAKTFRKAINKKEGICAIGGTSEQSSVGTQHSYSEEEKY 817
+DG+ISF+EF+ + LKS +++KTFRK INK+EGI AIGGTS SS GTQHSYSEEEK
Sbjct: 67 KDGKISFEEFVSLMQELKSKDISKTFRKIINKREGITAIGGTSTISSEGTQHSYSEEEKV 126
Query: 818 AFVNWINKALENDPDCRHVIPMDPNTNDLFSAVGDGIVLCKMINLSVPDTIDERTINKKK 997
AFVNWINKALENDPDC+H+IPM+PN + LF ++ DGI+LCKMINLS PDTIDER INKKK
Sbjct: 127 AFVNWINKALENDPDCKHLIPMNPNDDSLFKSLADGILLCKMINLSEPDTIDERAINKKK 186
Query: 998 LTPFTIQENLNLALNSASAIGCHVVNIGAEDLKEGKPYLVLGLLWQVIKIGLFADIELSR 1177
LTPFTI ENLNLALNSASAIGC VVNIGA DLKEGKP+LVLGLLWQ+IK+GLFADIE+SR
Sbjct: 187 LTPFTISENLNLALNSASAIGCTVVNIGASDLKEGKPHLVLGLLWQIIKVGLFADIEISR 246
Query: 1178 NEALAALLREGESLEDLMKLSPEELLLRWANYHLENAGCNKINNFSSDIKDSKAYYHLLE 1357
NEAL ALL EGE LE+LMKLSPEELLLRW NYHL NAG + I+NFS DIKDS+AY+HLL
Sbjct: 247 NEALIALLNEGEELEELMKLSPEELLLRWVNYHLTNAGWHTISNFSQDIKDSRAYFHLLN 306
Query: 1358 QVAPKGDEEGIPAVVIDMSGLREKDDIQRAECMLQQAERLGCRQFVTAPMWSEGTPR*TW 1537
Q+APKG E+G PA+ ID+SG+ E +D++RA MLQ+A++LGC+QFVT G P+
Sbjct: 307 QIAPKGGEDG-PAIAIDLSGINETNDLKRAGLMLQEADKLGCKQFVTPADVVSGNPKLNL 365
Query: 1538 -XXXXXXHRYPALHKPETQTSTGGLLK 1615
+ YP LHKP LL+
Sbjct: 366 AFVANLFNTYPCLHKPNNNDIDMNLLE 392
Score = 60.8 bits (146), Expect = 4e-09
Identities = 31/54 (57%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Frame = +1
Query: 1504 DVVRGNPKVNLAFIATS-SQIPRPAQTRDPDIDWGALESETREERTFRNWMNSL 1662
DVV GNPK+NLAF+A + P + + DID LE E++EERTFRNWMNSL
Sbjct: 355 DVVSGNPKLNLAFVANLFNTYPCLHKPNNNDIDMNLLEGESKEERTFRNWMNSL 408
Score = 53.9 bits (128), Expect = 4e-07
Identities = 55/239 (23%), Positives = 103/239 (43%), Gaps = 12/239 (5%)
Frame = +2
Query: 806 EEKYAFVNWINKALENDPDCRHVIPMDPNTNDLFSAVGDGIVLCKMINLSVPDTIDERTI 985
+E+ F NW+N + ++P N L+S + D +V+ ++ + + ++ +
Sbjct: 396 KEERTFRNWMNS-----------LGVNPYINHLYSDLADALVIFQLYEM-IRVPVNWSHV 443
Query: 986 NKKKLTPFTIQ----ENLNLALN-SASAIGCHVVNIGAEDLKEGKPYLVLGLLWQVIK-- 1144
NK EN N A+ + +V I +DL EG L L L+WQ+++
Sbjct: 444 NKPPYPALGGNMKKIENCNYAVELGKNKAKFSLVGIAGQDLNEGNSTLTLALVWQLMRRY 503
Query: 1145 -IGLFADIELSRNEALAALLREGESLEDLMKLSPEELLLRWANYHLENAGCNKINNFSS- 1318
+ + +D L EGE + D E++++W N L++A NK + SS
Sbjct: 504 TLNVLSD------------LGEGEKVND-------EIIIKWVNQTLKSA--NKKTSISSF 542
Query: 1319 ---DIKDSKAYYHLLEQVAPKGDEEGIPAVVIDMSGLREKDDIQRAECMLQQAERLGCR 1486
I S L++ +AP + +I L ++D + A+ + A ++G R
Sbjct: 543 KDKSISTSLPVLDLIDAIAP----NAVRQEMIRRENLSDEDKLNNAKYAISVARKIGAR 597
>ref|NP_958786.1| plectin isoform 1a [Homo sapiens].
Length = 4547
Score = 65.1 bits (157), Expect = 2e-10
Identities = 55/235 (23%), Positives = 108/235 (45%)
Frame = +2
Query: 770 QSSVGTQHSYSEEEKYAFVNWINKALENDPDCRHVIPMDPNTNDLFSAVGDGIVLCKMIN 949
++S G + +K F W+NK H+I + +DL+ + DG L ++
Sbjct: 31 RASEGKKDERDRVQKKTFTKWVNK---------HLIKAQRHISDLYEDLRDGHNLISLLE 81
Query: 950 LSVPDTIDERTINKKKLTPFTIQENLNLALNSASAIGCHVVNIGAEDLKEGKPYLVLGLL 1129
+ D++ +K F +N+ +AL+ +VNI +D+ +G P L LGL+
Sbjct: 82 VLSGDSLPR----EKGRMRFHKLQNVQIALDYLRHRQVKLVNIRNDDIADGNPKLTLGLI 137
Query: 1130 WQVIKIGLFADIELSRNEALAALLREGESLEDLMKLSPEELLLRWANYHLENAGCNKINN 1309
W +I +DI++S G+S ED ++ +E LL W+ +E + +N
Sbjct: 138 WTIILHFQISDIQVS-----------GQS-ED---MTAKEKLLLWSQRMVEGYQGLRCDN 182
Query: 1310 FSSDIKDSKAYYHLLEQVAPKGDEEGIPAVVIDMSGLREKDDIQRAECMLQQAER 1474
F+S +D + + ++ + P ++IDM+ + + +++ + AER
Sbjct: 183 FTSSWRDGRLFNAIIHRHKP---------LLIDMNKVYRQTNLENLDQAFSVAER 228
>ref|NP_036222.3| microtubule-actin cross-linking factor 1 isoform a [Homo sapiens].
Length = 5430
Score = 64.7 bits (156), Expect = 2e-10
Identities = 60/246 (24%), Positives = 104/246 (42%)
Frame = +2
Query: 764 SEQSSVGTQHSYSEEEKYAFVNWINKALENDPDCRHVIPMDPNTNDLFSAVGDGIVLCKM 943
+E++ V +K F W+NK H++ + + NDL+ + DG L +
Sbjct: 65 AERAVVRVADERDRVQKKTFTKWVNK---------HLMKVRKHINDLYEDLRDGHNLISL 115
Query: 944 INLSVPDTIDERTINKKKLTPFTIQENLNLALNSASAIGCHVVNIGAEDLKEGKPYLVLG 1123
+ + + +K F +N+ +AL+ +VNI +D+ +G P L LG
Sbjct: 116 LEVLSGIKLPR----EKGRMRFHRLQNVQIALDFLKQRQVKLVNIRNDDITDGNPKLTLG 171
Query: 1124 LLWQVIKIGLFADIELSRNEALAALLREGESLEDLMKLSPEELLLRWANYHLENAGCNKI 1303
L+W +I +DI +S GES + +S +E LL W K
Sbjct: 172 LIWTIILHFQISDIYIS-----------GESGD----MSAKEKLLLWTQKVTAGYTGIKC 216
Query: 1304 NNFSSDIKDSKAYYHLLEQVAPKGDEEGIPAVVIDMSGLREKDDIQRAECMLQQAERLGC 1483
NFSS D K + L+ + P ++DM ++ + + + E + AERLG
Sbjct: 217 TNFSSCWSDGKMFNALIHRYRPD---------LVDMERVQIQSNRENLEQAFEVAERLGV 267
Query: 1484 RQFVTA 1501
+ + A
Sbjct: 268 TRLLDA 273
>ref|NP_000436.2| plectin isoform 1c [Homo sapiens].
Length = 4574
Score = 63.2 bits (152), Expect = 7e-10
Identities = 53/222 (23%), Positives = 103/222 (46%)
Frame = +2
Query: 809 EKYAFVNWINKALENDPDCRHVIPMDPNTNDLFSAVGDGIVLCKMINLSVPDTIDERTIN 988
+K F W+NK H+I + +DL+ + DG L ++ + D++
Sbjct: 71 QKKTFTKWVNK---------HLIKAQRHISDLYEDLRDGHNLISLLEVLSGDSLPR---- 117
Query: 989 KKKLTPFTIQENLNLALNSASAIGCHVVNIGAEDLKEGKPYLVLGLLWQVIKIGLFADIE 1168
+K F +N+ +AL+ +VNI +D+ +G P L LGL+W +I +DI+
Sbjct: 118 EKGRMRFHKLQNVQIALDYLRHRQVKLVNIRNDDIADGNPKLTLGLIWTIILHFQISDIQ 177
Query: 1169 LSRNEALAALLREGESLEDLMKLSPEELLLRWANYHLENAGCNKINNFSSDIKDSKAYYH 1348
+S G+S ED ++ +E LL W+ +E + +NF+S +D + +
Sbjct: 178 VS-----------GQS-ED---MTAKEKLLLWSQRMVEGYQGLRCDNFTSSWRDGRLFNA 222
Query: 1349 LLEQVAPKGDEEGIPAVVIDMSGLREKDDIQRAECMLQQAER 1474
++ + P ++IDM+ + + +++ + AER
Sbjct: 223 IIHRHKP---------LLIDMNKVYRQTNLENLDQAFSVAER 255
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 65,366,063
Number of extensions: 1743401
Number of successful extensions: 5829
Number of sequences better than 1.0e-05: 30
Number of HSP's gapped: 5692
Number of HSP's successfully gapped: 43
Length of query: 560
Length of database: 18,297,164
Length adjustment: 108
Effective length of query: 452
Effective length of database: 14,737,052
Effective search space: 6661147504
Effective search space used: 6661147504
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007283
(1681 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_032905.2| plastin-2 [Mus musculus]. 706 0.0
Alignment gi|NP_001159926.1| plastin-3 [Mus musculus]. 569 e-162
Alignment gi|NP_001159925.1| plastin-3 [Mus musculus]. 569 e-162
Alignment gi|NP_663604.1| plastin-3 [Mus musculus]. 569 e-162
Alignment gi|NP_001028382.1| plastin-1 [Mus musculus]. 520 e-147
Alignment gi|NP_598594.2| dystonin isoform a [Mus musculus]. 66 7e-11
Alignment gi|NP_604443.2| dystonin isoform b [Mus musculus]. 66 7e-11
Alignment gi|NP_001186066.1| microtubule-actin cross-linking factor 1 iso... 65 2e-10
Alignment gi|NP_001186065.1| microtubule-actin cross-linking factor 1 iso... 65 2e-10
Alignment gi|NP_958796.2| plectin isoform 1a [Mus musculus]. 64 4e-10
>ref|NP_032905.2| plastin-2 [Mus musculus].
Length = 627
Score = 706 bits (1823), Expect = 0.0
Identities = 356/391 (91%), Positives = 366/391 (93%), Gaps = 1/391 (0%)
Frame = +2
Query: 446 MARGSVSDEEMMELREAFAKVDTDGNGYISCNELNDLFKAACLPLPGYRVREITENLMAT 625
MARGSVSDEEMMELREAFAKVDTDGNGYISCNELNDLFKAACLPLPGYRVREITENLMAT
Sbjct: 1 MARGSVSDEEMMELREAFAKVDTDGNGYISCNELNDLFKAACLPLPGYRVREITENLMAT 60
Query: 626 GDLDRDGRISFDEFIKVFHGLKSTEVAKTFRKAINKKEGICAIGGTSEQSSVGTQHSYSE 805
GDLD+DG+ISFDEFIKVFHGLKSTEVAKTFRKAINKKEGICAIGGTSEQSSVGTQHSYSE
Sbjct: 61 GDLDQDGKISFDEFIKVFHGLKSTEVAKTFRKAINKKEGICAIGGTSEQSSVGTQHSYSE 120
Query: 806 EEKYAFVNWINKALENDPDCRHVIPMDPNTNDLFSAVGDGIVLCKMINLSVPDTIDERTI 985
EEKYAFVNWINKALENDPDCRHVIPM+PNT+DLF+AVGDGIVLCKMINLSVPDTIDERTI
Sbjct: 121 EEKYAFVNWINKALENDPDCRHVIPMNPNTDDLFNAVGDGIVLCKMINLSVPDTIDERTI 180
Query: 986 NKKKLTPFTIQENLNLALNSASAIGCHVVNIGAEDLKEGKPYLVLGLLWQVIKIGLFADI 1165
NKKKLTPFTIQENLNLALNSASAIGCHVVNIGAEDLKEGKPYLVLGLLWQVIKIGLFADI
Sbjct: 181 NKKKLTPFTIQENLNLALNSASAIGCHVVNIGAEDLKEGKPYLVLGLLWQVIKIGLFADI 240
Query: 1166 ELSRNEALAALLREGESLEDLMKLSPEELLLRWANYHLENAGCNKINNFSSDIKDSKAYY 1345
ELSRNEAL ALLREGESLEDLMKLSPEELLLRWANYHLENAGC KI NFS+DIKDSKAYY
Sbjct: 241 ELSRNEALIALLREGESLEDLMKLSPEELLLRWANYHLENAGCTKITNFSTDIKDSKAYY 300
Query: 1346 HLLEQVAPKGDEEGIPAVVIDMSGLREKDDIQRAECMLQQAERLGCRQFVTAPMWSEGTP 1525
HLLEQVAPKGDEEGIPAVVIDMSGLREKDDIQRAECMLQQAERLGCRQFVTA G P
Sbjct: 301 HLLEQVAPKGDEEGIPAVVIDMSGLREKDDIQRAECMLQQAERLGCRQFVTATDVVRGNP 360
Query: 1526 R*TW-XXXXXXHRYPALHKPETQTSTGGLLK 1615
+ ++YPALHKPE Q G L+
Sbjct: 361 KLNLAFIANLFNKYPALHKPENQDIDWGALE 391
Score = 81.3 bits (199), Expect = 2e-15
Identities = 41/62 (66%), Positives = 47/62 (75%), Gaps = 1/62 (1%)
Frame = +1
Query: 1498 STDVVRGNPKVNLAFIATS-SQIPRPAQTRDPDIDWGALESETREERTFRNWMNSLXCXX 1674
+TDVVRGNPK+NLAFIA ++ P + + DIDWGALE ETREERTFRNWMNSL
Sbjct: 352 ATDVVRGNPKLNLAFIANLFNKYPALHKPENQDIDWGALEGETREERTFRNWMNSLGVNP 411
Query: 1675 RV 1680
RV
Sbjct: 412 RV 413
>ref|NP_001159926.1| plastin-3 [Mus musculus].
Length = 630
Score = 569 bits (1466), Expect = e-162
Identities = 283/392 (72%), Positives = 331/392 (84%), Gaps = 1/392 (0%)
Frame = +2
Query: 443 KMARGSVSDEEMMELREAFAKVDTDGNGYISCNELNDLFKAACLPLPGYRVREITENLMA 622
+MA +S +E+ EL+EAFAKVD + NG+I EL++LFK A +PLPGY+VREI + LM
Sbjct: 3 EMATTQISKDELDELKEAFAKVDLNSNGFICDYELHELFKEANMPLPGYKVREIIQKLMV 62
Query: 623 TGDLDRDGRISFDEFIKVFHGLKSTEVAKTFRKAINKKEGICAIGGTSEQSSVGTQHSYS 802
GD ++DG+ISF+EF+ +F +KS+++AKTFRKAIN+KEGICA+GGTSE SS GTQHSYS
Sbjct: 63 DGDRNKDGKISFNEFVYIFQEVKSSDIAKTFRKAINRKEGICALGGTSELSSEGTQHSYS 122
Query: 803 EEEKYAFVNWINKALENDPDCRHVIPMDPNTNDLFSAVGDGIVLCKMINLSVPDTIDERT 982
EEEKYAFVNWINKALENDPDCRHVIPM+PNT+DLF AVGDGIVLCKMINLSVPDTIDER
Sbjct: 123 EEEKYAFVNWINKALENDPDCRHVIPMNPNTDDLFKAVGDGIVLCKMINLSVPDTIDERA 182
Query: 983 INKKKLTPFTIQENLNLALNSASAIGCHVVNIGAEDLKEGKPYLVLGLLWQVIKIGLFAD 1162
INKKKLTPF IQENLNLALNSASAIGCHVVNIGAEDL+ GKP+LVLGLLWQ+IKIGLFAD
Sbjct: 183 INKKKLTPFIIQENLNLALNSASAIGCHVVNIGAEDLRAGKPHLVLGLLWQIIKIGLFAD 242
Query: 1163 IELSRNEALAALLREGESLEDLMKLSPEELLLRWANYHLENAGCNKINNFSSDIKDSKAY 1342
IELSRNEALAALLR+GE+LE+LMKLSPEELLLRWAN+HLEN+G KINNFS+DIKDSKAY
Sbjct: 243 IELSRNEALAALLRDGETLEELMKLSPEELLLRWANFHLENSGWQKINNFSADIKDSKAY 302
Query: 1343 YHLLEQVAPKGDEEGIPAVVIDMSGLREKDDIQRAECMLQQAERLGCRQFVTAPMWSEGT 1522
+HLL Q+APKG +EG P + I+MSG E DD++RAE MLQQA++LGCRQFVT G
Sbjct: 303 FHLLNQIAPKGQKEGEPRIDINMSGFNETDDLKRAESMLQQADKLGCRQFVTPADVVSGN 362
Query: 1523 PR*TW-XXXXXXHRYPALHKPETQTSTGGLLK 1615
P+ ++YPAL KPE Q LL+
Sbjct: 363 PKLNLAFVANLFNKYPALTKPENQDIDWTLLE 394
Score = 70.1 bits (170), Expect = 5e-12
Identities = 34/54 (62%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Frame = +1
Query: 1504 DVVRGNPKVNLAFIATS-SQIPRPAQTRDPDIDWGALESETREERTFRNWMNSL 1662
DVV GNPK+NLAF+A ++ P + + DIDW LE ETREERTFRNWMNSL
Sbjct: 357 DVVSGNPKLNLAFVANLFNKYPALTKPENQDIDWTLLEGETREERTFRNWMNSL 410
Score = 54.3 bits (129), Expect = 3e-07
Identities = 59/238 (24%), Positives = 97/238 (40%), Gaps = 10/238 (4%)
Frame = +2
Query: 809 EKYAFVNWINKALENDPDCRHVIPMDPNTNDLFSAVGDGIVLCKMIN-LSVPDTIDERTI 985
E+ F NW+N + ++P+ N L++ + D +V+ ++ + VP +D +
Sbjct: 399 EERTFRNWMNS-----------LGVNPHVNHLYADLQDALVILQLYERIKVP--VDWSKV 445
Query: 986 NKKKLTPFTIQ----ENLNLALN-SASAIGCHVVNIGAEDLKEGKPYLVLGLLWQVIKIG 1150
NK EN N A+ + +V IG +DL +G P L L ++WQ
Sbjct: 446 NKPPYPKLGANMKKLENCNYAVELGKNPAKFSLVGIGGQDLNDGNPTLTLAVVWQ----- 500
Query: 1151 LFADIELSRNEALAAL--LREGESLEDLMKLSPEELLLRWANYHLENAG-CNKINNF-SS 1318
L R L L L EG+ D ++++ W N L AG I +F
Sbjct: 501 ------LMRRYTLNVLEDLGEGQKAND-------DIIVNWVNRTLSEAGKSTSIQSFKDK 547
Query: 1319 DIKDSKAYYHLLEQVAPKGDEEGIPAVVIDMSGLREKDDIQRAECMLQQAERLGCRQF 1492
I S A L++ + P I ++ L E D A+ + A R+G R +
Sbjct: 548 TISSSLAVVDLIDAIQP----GCINYDLVKSGNLTEDDKHNNAKYAVSMARRIGARVY 601
>ref|NP_001159925.1| plastin-3 [Mus musculus].
Length = 630
Score = 569 bits (1466), Expect = e-162
Identities = 283/392 (72%), Positives = 331/392 (84%), Gaps = 1/392 (0%)
Frame = +2
Query: 443 KMARGSVSDEEMMELREAFAKVDTDGNGYISCNELNDLFKAACLPLPGYRVREITENLMA 622
+MA +S +E+ EL+EAFAKVD + NG+I EL++LFK A +PLPGY+VREI + LM
Sbjct: 3 EMATTQISKDELDELKEAFAKVDLNSNGFICDYELHELFKEANMPLPGYKVREIIQKLMV 62
Query: 623 TGDLDRDGRISFDEFIKVFHGLKSTEVAKTFRKAINKKEGICAIGGTSEQSSVGTQHSYS 802
GD ++DG+ISF+EF+ +F +KS+++AKTFRKAIN+KEGICA+GGTSE SS GTQHSYS
Sbjct: 63 DGDRNKDGKISFNEFVYIFQEVKSSDIAKTFRKAINRKEGICALGGTSELSSEGTQHSYS 122
Query: 803 EEEKYAFVNWINKALENDPDCRHVIPMDPNTNDLFSAVGDGIVLCKMINLSVPDTIDERT 982
EEEKYAFVNWINKALENDPDCRHVIPM+PNT+DLF AVGDGIVLCKMINLSVPDTIDER
Sbjct: 123 EEEKYAFVNWINKALENDPDCRHVIPMNPNTDDLFKAVGDGIVLCKMINLSVPDTIDERA 182
Query: 983 INKKKLTPFTIQENLNLALNSASAIGCHVVNIGAEDLKEGKPYLVLGLLWQVIKIGLFAD 1162
INKKKLTPF IQENLNLALNSASAIGCHVVNIGAEDL+ GKP+LVLGLLWQ+IKIGLFAD
Sbjct: 183 INKKKLTPFIIQENLNLALNSASAIGCHVVNIGAEDLRAGKPHLVLGLLWQIIKIGLFAD 242
Query: 1163 IELSRNEALAALLREGESLEDLMKLSPEELLLRWANYHLENAGCNKINNFSSDIKDSKAY 1342
IELSRNEALAALLR+GE+LE+LMKLSPEELLLRWAN+HLEN+G KINNFS+DIKDSKAY
Sbjct: 243 IELSRNEALAALLRDGETLEELMKLSPEELLLRWANFHLENSGWQKINNFSADIKDSKAY 302
Query: 1343 YHLLEQVAPKGDEEGIPAVVIDMSGLREKDDIQRAECMLQQAERLGCRQFVTAPMWSEGT 1522
+HLL Q+APKG +EG P + I+MSG E DD++RAE MLQQA++LGCRQFVT G
Sbjct: 303 FHLLNQIAPKGQKEGEPRIDINMSGFNETDDLKRAESMLQQADKLGCRQFVTPADVVSGN 362
Query: 1523 PR*TW-XXXXXXHRYPALHKPETQTSTGGLLK 1615
P+ ++YPAL KPE Q LL+
Sbjct: 363 PKLNLAFVANLFNKYPALTKPENQDIDWTLLE 394
Score = 70.1 bits (170), Expect = 5e-12
Identities = 34/54 (62%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Frame = +1
Query: 1504 DVVRGNPKVNLAFIATS-SQIPRPAQTRDPDIDWGALESETREERTFRNWMNSL 1662
DVV GNPK+NLAF+A ++ P + + DIDW LE ETREERTFRNWMNSL
Sbjct: 357 DVVSGNPKLNLAFVANLFNKYPALTKPENQDIDWTLLEGETREERTFRNWMNSL 410
Score = 54.3 bits (129), Expect = 3e-07
Identities = 59/238 (24%), Positives = 97/238 (40%), Gaps = 10/238 (4%)
Frame = +2
Query: 809 EKYAFVNWINKALENDPDCRHVIPMDPNTNDLFSAVGDGIVLCKMIN-LSVPDTIDERTI 985
E+ F NW+N + ++P+ N L++ + D +V+ ++ + VP +D +
Sbjct: 399 EERTFRNWMNS-----------LGVNPHVNHLYADLQDALVILQLYERIKVP--VDWSKV 445
Query: 986 NKKKLTPFTIQ----ENLNLALN-SASAIGCHVVNIGAEDLKEGKPYLVLGLLWQVIKIG 1150
NK EN N A+ + +V IG +DL +G P L L ++WQ
Sbjct: 446 NKPPYPKLGANMKKLENCNYAVELGKNPAKFSLVGIGGQDLNDGNPTLTLAVVWQ----- 500
Query: 1151 LFADIELSRNEALAAL--LREGESLEDLMKLSPEELLLRWANYHLENAG-CNKINNF-SS 1318
L R L L L EG+ D ++++ W N L AG I +F
Sbjct: 501 ------LMRRYTLNVLEDLGEGQKAND-------DIIVNWVNRTLSEAGKSTSIQSFKDK 547
Query: 1319 DIKDSKAYYHLLEQVAPKGDEEGIPAVVIDMSGLREKDDIQRAECMLQQAERLGCRQF 1492
I S A L++ + P I ++ L E D A+ + A R+G R +
Sbjct: 548 TISSSLAVVDLIDAIQP----GCINYDLVKSGNLTEDDKHNNAKYAVSMARRIGARVY 601
>ref|NP_663604.1| plastin-3 [Mus musculus].
Length = 630
Score = 569 bits (1466), Expect = e-162
Identities = 283/392 (72%), Positives = 331/392 (84%), Gaps = 1/392 (0%)
Frame = +2
Query: 443 KMARGSVSDEEMMELREAFAKVDTDGNGYISCNELNDLFKAACLPLPGYRVREITENLMA 622
+MA +S +E+ EL+EAFAKVD + NG+I EL++LFK A +PLPGY+VREI + LM
Sbjct: 3 EMATTQISKDELDELKEAFAKVDLNSNGFICDYELHELFKEANMPLPGYKVREIIQKLMV 62
Query: 623 TGDLDRDGRISFDEFIKVFHGLKSTEVAKTFRKAINKKEGICAIGGTSEQSSVGTQHSYS 802
GD ++DG+ISF+EF+ +F +KS+++AKTFRKAIN+KEGICA+GGTSE SS GTQHSYS
Sbjct: 63 DGDRNKDGKISFNEFVYIFQEVKSSDIAKTFRKAINRKEGICALGGTSELSSEGTQHSYS 122
Query: 803 EEEKYAFVNWINKALENDPDCRHVIPMDPNTNDLFSAVGDGIVLCKMINLSVPDTIDERT 982
EEEKYAFVNWINKALENDPDCRHVIPM+PNT+DLF AVGDGIVLCKMINLSVPDTIDER
Sbjct: 123 EEEKYAFVNWINKALENDPDCRHVIPMNPNTDDLFKAVGDGIVLCKMINLSVPDTIDERA 182
Query: 983 INKKKLTPFTIQENLNLALNSASAIGCHVVNIGAEDLKEGKPYLVLGLLWQVIKIGLFAD 1162
INKKKLTPF IQENLNLALNSASAIGCHVVNIGAEDL+ GKP+LVLGLLWQ+IKIGLFAD
Sbjct: 183 INKKKLTPFIIQENLNLALNSASAIGCHVVNIGAEDLRAGKPHLVLGLLWQIIKIGLFAD 242
Query: 1163 IELSRNEALAALLREGESLEDLMKLSPEELLLRWANYHLENAGCNKINNFSSDIKDSKAY 1342
IELSRNEALAALLR+GE+LE+LMKLSPEELLLRWAN+HLEN+G KINNFS+DIKDSKAY
Sbjct: 243 IELSRNEALAALLRDGETLEELMKLSPEELLLRWANFHLENSGWQKINNFSADIKDSKAY 302
Query: 1343 YHLLEQVAPKGDEEGIPAVVIDMSGLREKDDIQRAECMLQQAERLGCRQFVTAPMWSEGT 1522
+HLL Q+APKG +EG P + I+MSG E DD++RAE MLQQA++LGCRQFVT G
Sbjct: 303 FHLLNQIAPKGQKEGEPRIDINMSGFNETDDLKRAESMLQQADKLGCRQFVTPADVVSGN 362
Query: 1523 PR*TW-XXXXXXHRYPALHKPETQTSTGGLLK 1615
P+ ++YPAL KPE Q LL+
Sbjct: 363 PKLNLAFVANLFNKYPALTKPENQDIDWTLLE 394
Score = 70.1 bits (170), Expect = 5e-12
Identities = 34/54 (62%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Frame = +1
Query: 1504 DVVRGNPKVNLAFIATS-SQIPRPAQTRDPDIDWGALESETREERTFRNWMNSL 1662
DVV GNPK+NLAF+A ++ P + + DIDW LE ETREERTFRNWMNSL
Sbjct: 357 DVVSGNPKLNLAFVANLFNKYPALTKPENQDIDWTLLEGETREERTFRNWMNSL 410
Score = 54.3 bits (129), Expect = 3e-07
Identities = 59/238 (24%), Positives = 97/238 (40%), Gaps = 10/238 (4%)
Frame = +2
Query: 809 EKYAFVNWINKALENDPDCRHVIPMDPNTNDLFSAVGDGIVLCKMIN-LSVPDTIDERTI 985
E+ F NW+N + ++P+ N L++ + D +V+ ++ + VP +D +
Sbjct: 399 EERTFRNWMNS-----------LGVNPHVNHLYADLQDALVILQLYERIKVP--VDWSKV 445
Query: 986 NKKKLTPFTIQ----ENLNLALN-SASAIGCHVVNIGAEDLKEGKPYLVLGLLWQVIKIG 1150
NK EN N A+ + +V IG +DL +G P L L ++WQ
Sbjct: 446 NKPPYPKLGANMKKLENCNYAVELGKNPAKFSLVGIGGQDLNDGNPTLTLAVVWQ----- 500
Query: 1151 LFADIELSRNEALAAL--LREGESLEDLMKLSPEELLLRWANYHLENAG-CNKINNF-SS 1318
L R L L L EG+ D ++++ W N L AG I +F
Sbjct: 501 ------LMRRYTLNVLEDLGEGQKAND-------DIIVNWVNRTLSEAGKSTSIQSFKDK 547
Query: 1319 DIKDSKAYYHLLEQVAPKGDEEGIPAVVIDMSGLREKDDIQRAECMLQQAERLGCRQF 1492
I S A L++ + P I ++ L E D A+ + A R+G R +
Sbjct: 548 TISSSLAVVDLIDAIQP----GCINYDLVKSGNLTEDDKHNNAKYAVSMARRIGARVY 601
>ref|NP_001028382.1| plastin-1 [Mus musculus].
Length = 630
Score = 520 bits (1340), Expect = e-147
Identities = 257/387 (66%), Positives = 306/387 (79%), Gaps = 1/387 (0%)
Frame = +2
Query: 458 SVSDEEMMELREAFAKVDTDGNGYISCNELNDLFKAACLPLPGYRVREITENLMATGDLD 637
++S EE+ EL+EAF K+D D +GY+S EL DLFK A LPLPGY+VREI E ++ D +
Sbjct: 7 TISREELEELQEAFNKIDIDNSGYVSDYELQDLFKEASLPLPGYKVREIVEKILVVADNN 66
Query: 638 RDGRISFDEFIKVFHGLKSTEVAKTFRKAINKKEGICAIGGTSEQSSVGTQHSYSEEEKY 817
+DG+ISF+EF+ + LKS +++KTFRK INK+EGI AIGGTS SS GTQHSYSEEEK
Sbjct: 67 KDGKISFEEFVSLMQELKSKDISKTFRKIINKREGITAIGGTSSISSEGTQHSYSEEEKV 126
Query: 818 AFVNWINKALENDPDCRHVIPMDPNTNDLFSAVGDGIVLCKMINLSVPDTIDERTINKKK 997
AFVNWINKALEND DC H++PM+PN LF ++ DGI+LCKMINLS PDTIDER INKKK
Sbjct: 127 AFVNWINKALENDADCSHLLPMNPNDGSLFKSLADGILLCKMINLSEPDTIDERAINKKK 186
Query: 998 LTPFTIQENLNLALNSASAIGCHVVNIGAEDLKEGKPYLVLGLLWQVIKIGLFADIELSR 1177
LTPFT+ ENLNLALNSASAIGC VVNIGA+DLKEGKP+LVLGLLWQ+IK+GLFADIE+SR
Sbjct: 187 LTPFTVSENLNLALNSASAIGCTVVNIGAQDLKEGKPHLVLGLLWQIIKVGLFADIEISR 246
Query: 1178 NEALAALLREGESLEDLMKLSPEELLLRWANYHLENAGCNKINNFSSDIKDSKAYYHLLE 1357
NEAL ALL++GE LE+LMKLSPEELLLRW NYHL NAG INNFS DIKDSKAY+HLL
Sbjct: 247 NEALIALLKDGEDLEELMKLSPEELLLRWVNYHLTNAGWRTINNFSQDIKDSKAYFHLLN 306
Query: 1358 QVAPKGDEEGIPAVVIDMSGLREKDDIQRAECMLQQAERLGCRQFVTAPMWSEGTPR*TW 1537
Q+APKGD + PAV ID+SG EK+D++RA MLQ+A++LGCRQFVT G P+
Sbjct: 307 QIAPKGDRDDGPAVAIDLSGFNEKNDLKRAGFMLQEADKLGCRQFVTPADVVSGNPKLNL 366
Query: 1538 -XXXXXXHRYPALHKPETQTSTGGLLK 1615
+ YP LHKP+ LL+
Sbjct: 367 AFVANLFNTYPCLHKPDNNDIDLNLLE 393
Score = 59.7 bits (143), Expect = 7e-09
Identities = 31/54 (57%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Frame = +1
Query: 1504 DVVRGNPKVNLAFIATS-SQIPRPAQTRDPDIDWGALESETREERTFRNWMNSL 1662
DVV GNPK+NLAF+A + P + + DID LE E++EERTFRNWMNSL
Sbjct: 356 DVVSGNPKLNLAFVANLFNTYPCLHKPDNNDIDLNLLEGESKEERTFRNWMNSL 409
Score = 53.1 bits (126), Expect = 6e-07
Identities = 57/238 (23%), Positives = 100/238 (42%), Gaps = 11/238 (4%)
Frame = +2
Query: 806 EEKYAFVNWINKALENDPDCRHVIPMDPNTNDLFSAVGDGIVLCKMINLSVPDTIDERTI 985
+E+ F NW+N + ++P N L+S + D +V+ ++ + + ++ +
Sbjct: 397 KEERTFRNWMNS-----------LGVNPYINHLYSDLADALVIFQLYEM-IRVPVNWSQV 444
Query: 986 NKKKLTPFTIQ----ENLNLALN-SASAIGCHVVNIGAEDLKEGKPYLVLGLLWQVIKIG 1150
NK EN N A+ + +V I +DL EG L L L+WQ
Sbjct: 445 NKPPYPALGGNMKKIENCNYAVELGKNEAKFSLVGIAGQDLNEGNATLTLALVWQ----- 499
Query: 1151 LFADIELSRNEALAAL--LREGESLEDLMKLSPEELLLRWANYHLENAGCNKINNFSS-- 1318
L R L L L EGE + D +++++W N L++A NK + SS
Sbjct: 500 ------LMRRYTLKVLSDLGEGEKVTD-------DIIIKWVNQTLKSA--NKSTSISSFK 544
Query: 1319 --DIKDSKAYYHLLEQVAPKGDEEGIPAVVIDMSGLREKDDIQRAECMLQQAERLGCR 1486
I S L++ +AP + +I L ++D + A+ + A ++G R
Sbjct: 545 DKSISTSLPVLDLIDAIAP----NAVRQEMIKREHLTDEDKLNNAKYAISVARKIGAR 598
>ref|NP_598594.2| dystonin isoform a [Mus musculus].
Length = 5379
Score = 66.2 bits (160), Expect = 7e-11
Identities = 56/224 (25%), Positives = 100/224 (44%)
Frame = +2
Query: 809 EKYAFVNWINKALENDPDCRHVIPMDPNTNDLFSAVGDGIVLCKMINLSVPDTIDERTIN 988
+K F WIN+ H++ + + NDL+ + DG L ++ + DT+
Sbjct: 37 QKKTFTKWINQ---------HLMKVRKHVNDLYEDLRDGHNLISLLEVLSGDTLPR---- 83
Query: 989 KKKLTPFTIQENLNLALNSASAIGCHVVNIGAEDLKEGKPYLVLGLLWQVIKIGLFADIE 1168
+K F +N+ +AL+ +VNI +D+ +G P L LGL+W +I +DI
Sbjct: 84 EKGRMRFHRLQNVQIALDYLKRRQVKLVNIRNDDITDGNPKLTLGLIWTIILHFQISDIH 143
Query: 1169 LSRNEALAALLREGESLEDLMKLSPEELLLRWANYHLENAGCNKINNFSSDIKDSKAYYH 1348
++ GES ED +S +E LL W E + NF++ +D K +
Sbjct: 144 VT-----------GES-ED---MSAKERLLLWTQQATEGYAGVRCENFTTCWRDGKLFNA 188
Query: 1349 LLEQVAPKGDEEGIPAVVIDMSGLREKDDIQRAECMLQQAERLG 1480
++ + P +IDM+ + + ++ E AE++G
Sbjct: 189 IIHKYRPD---------LIDMNTVAVQSNLANLEHAFYVAEKIG 223
>ref|NP_604443.2| dystonin isoform b [Mus musculus].
Length = 7393
Score = 66.2 bits (160), Expect = 7e-11
Identities = 56/224 (25%), Positives = 100/224 (44%)
Frame = +2
Query: 809 EKYAFVNWINKALENDPDCRHVIPMDPNTNDLFSAVGDGIVLCKMINLSVPDTIDERTIN 988
+K F WIN+ H++ + + NDL+ + DG L ++ + DT+
Sbjct: 37 QKKTFTKWINQ---------HLMKVRKHVNDLYEDLRDGHNLISLLEVLSGDTLPR---- 83
Query: 989 KKKLTPFTIQENLNLALNSASAIGCHVVNIGAEDLKEGKPYLVLGLLWQVIKIGLFADIE 1168
+K F +N+ +AL+ +VNI +D+ +G P L LGL+W +I +DI
Sbjct: 84 EKGRMRFHRLQNVQIALDYLKRRQVKLVNIRNDDITDGNPKLTLGLIWTIILHFQISDIH 143
Query: 1169 LSRNEALAALLREGESLEDLMKLSPEELLLRWANYHLENAGCNKINNFSSDIKDSKAYYH 1348
++ GES ED +S +E LL W E + NF++ +D K +
Sbjct: 144 VT-----------GES-ED---MSAKERLLLWTQQATEGYAGVRCENFTTCWRDGKLFNA 188
Query: 1349 LLEQVAPKGDEEGIPAVVIDMSGLREKDDIQRAECMLQQAERLG 1480
++ + P +IDM+ + + ++ E AE++G
Sbjct: 189 IIHKYRPD---------LIDMNTVAVQSNLANLEHAFYVAEKIG 223
>ref|NP_001186066.1| microtubule-actin cross-linking factor 1 isoform 2 [Mus musculus].
Length = 5328
Score = 65.1 bits (157), Expect = 2e-10
Identities = 60/246 (24%), Positives = 104/246 (42%)
Frame = +2
Query: 764 SEQSSVGTQHSYSEEEKYAFVNWINKALENDPDCRHVIPMDPNTNDLFSAVGDGIVLCKM 943
+E++ V +K F W+NK H++ + + NDL+ + DG L +
Sbjct: 65 AERAVVRVADERDRVQKKTFTKWVNK---------HLMKVRKHINDLYEDLRDGHNLISL 115
Query: 944 INLSVPDTIDERTINKKKLTPFTIQENLNLALNSASAIGCHVVNIGAEDLKEGKPYLVLG 1123
+ + + +K F +N+ +AL+ +VNI +D+ +G P L LG
Sbjct: 116 LEVLSGIKLPR----EKGRMRFHRLQNVQIALDFLKQRQVKLVNIRNDDITDGNPKLTLG 171
Query: 1124 LLWQVIKIGLFADIELSRNEALAALLREGESLEDLMKLSPEELLLRWANYHLENAGCNKI 1303
L+W +I +DI +S GES + +S +E LL W K
Sbjct: 172 LIWTIILHFQISDIYIS-----------GESGD----MSAKEKLLLWTQKVTAGYTGVKC 216
Query: 1304 NNFSSDIKDSKAYYHLLEQVAPKGDEEGIPAVVIDMSGLREKDDIQRAECMLQQAERLGC 1483
NFSS D K + L+ + P ++DM ++ + + + E + AERLG
Sbjct: 217 TNFSSCWSDGKMFNALIHRYRPD---------LVDMERVQVQSNRENLEQAFEVAERLGV 267
Query: 1484 RQFVTA 1501
+ + A
Sbjct: 268 TRLLDA 273
>ref|NP_001186065.1| microtubule-actin cross-linking factor 1 isoform 1 [Mus musculus].
Length = 7355
Score = 65.1 bits (157), Expect = 2e-10
Identities = 60/246 (24%), Positives = 104/246 (42%)
Frame = +2
Query: 764 SEQSSVGTQHSYSEEEKYAFVNWINKALENDPDCRHVIPMDPNTNDLFSAVGDGIVLCKM 943
+E++ V +K F W+NK H++ + + NDL+ + DG L +
Sbjct: 65 AERAVVRVADERDRVQKKTFTKWVNK---------HLMKVRKHINDLYEDLRDGHNLISL 115
Query: 944 INLSVPDTIDERTINKKKLTPFTIQENLNLALNSASAIGCHVVNIGAEDLKEGKPYLVLG 1123
+ + + +K F +N+ +AL+ +VNI +D+ +G P L LG
Sbjct: 116 LEVLSGIKLPR----EKGRMRFHRLQNVQIALDFLKQRQVKLVNIRNDDITDGNPKLTLG 171
Query: 1124 LLWQVIKIGLFADIELSRNEALAALLREGESLEDLMKLSPEELLLRWANYHLENAGCNKI 1303
L+W +I +DI +S GES + +S +E LL W K
Sbjct: 172 LIWTIILHFQISDIYIS-----------GESGD----MSAKEKLLLWTQKVTAGYTGVKC 216
Query: 1304 NNFSSDIKDSKAYYHLLEQVAPKGDEEGIPAVVIDMSGLREKDDIQRAECMLQQAERLGC 1483
NFSS D K + L+ + P ++DM ++ + + + E + AERLG
Sbjct: 217 TNFSSCWSDGKMFNALIHRYRPD---------LVDMERVQVQSNRENLEQAFEVAERLGV 267
Query: 1484 RQFVTA 1501
+ + A
Sbjct: 268 TRLLDA 273
>ref|NP_958796.2| plectin isoform 1a [Mus musculus].
Length = 4543
Score = 63.9 bits (154), Expect = 4e-10
Identities = 54/235 (22%), Positives = 108/235 (45%)
Frame = +2
Query: 770 QSSVGTQHSYSEEEKYAFVNWINKALENDPDCRHVIPMDPNTNDLFSAVGDGIVLCKMIN 949
++S G + +K F W+NK H+I + +DL+ + DG L ++
Sbjct: 31 RASEGKKDERDRVQKKTFTKWVNK---------HLIKAQRHISDLYEDLRDGHNLISLLE 81
Query: 950 LSVPDTIDERTINKKKLTPFTIQENLNLALNSASAIGCHVVNIGAEDLKEGKPYLVLGLL 1129
+ D++ +K F +N+ +AL+ +VNI +D+ +G P L LGL+
Sbjct: 82 VLSGDSLPR----EKGRMRFHKLQNVQIALDYLRHRQVKLVNIRNDDIADGNPKLTLGLI 137
Query: 1130 WQVIKIGLFADIELSRNEALAALLREGESLEDLMKLSPEELLLRWANYHLENAGCNKINN 1309
W +I +DI++S G+S ED ++ +E LL W+ +E + +N
Sbjct: 138 WTIILHFQISDIQVS-----------GQS-ED---MTAKEKLLLWSQRMVEGYQGLRCDN 182
Query: 1310 FSSDIKDSKAYYHLLEQVAPKGDEEGIPAVVIDMSGLREKDDIQRAECMLQQAER 1474
F++ +D + + ++ + P ++IDM+ + + +++ + AER
Sbjct: 183 FTTSWRDGRLFNAIIHRHKP---------MLIDMNKVYRQTNLENLDQAFSVAER 228
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 55,478,246
Number of extensions: 1467236
Number of successful extensions: 4745
Number of sequences better than 1.0e-05: 30
Number of HSP's gapped: 4665
Number of HSP's successfully gapped: 39
Length of query: 560
Length of database: 15,617,559
Length adjustment: 107
Effective length of query: 453
Effective length of database: 12,403,707
Effective search space: 5618879271
Effective search space used: 5618879271
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007283
(1681 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_001929173.1| PREDICTED: plastin-2 isoform 1 [Sus scrofa]. 723 0.0
Alignment gi|XP_003360471.1| PREDICTED: plastin-3 [Sus scrofa]. 570 e-163
Alignment gi|XP_001925971.3| PREDICTED: plastin-3 isoform 1 [Sus scrofa]. 570 e-163
Alignment gi|XP_003360472.1| PREDICTED: plastin-3 [Sus scrofa]. 541 e-154
Alignment gi|XP_003135372.1| PREDICTED: plastin-3 isoform 2 [Sus scrofa]. 524 e-149
Alignment gi|XP_003357898.1| PREDICTED: hypothetical protein LOC100623452... 496 e-140
Alignment gi|XP_003358642.1| PREDICTED: hypothetical protein LOC100516400... 308 6e-84
Alignment gi|XP_003127855.2| PREDICTED: microtubule-actin cross-linking f... 64 3e-10
Alignment gi|XP_001927057.3| PREDICTED: spectrin beta chain, erythrocyte ... 61 2e-09
Alignment gi|XP_003354869.1| PREDICTED: spectrin beta chain, brain 1 isof... 56 5e-08
>ref|XP_001929173.1| PREDICTED: plastin-2 isoform 1 [Sus scrofa].
Length = 627
Score = 723 bits (1866), Expect = 0.0
Identities = 366/391 (93%), Positives = 369/391 (94%), Gaps = 1/391 (0%)
Frame = +2
Query: 446 MARGSVSDEEMMELREAFAKVDTDGNGYISCNELNDLFKAACLPLPGYRVREITENLMAT 625
MARGSVSDEEMMELREAFAKVDTDGNGYISCNELNDLFKAACLPLPGYRVREITENLMAT
Sbjct: 1 MARGSVSDEEMMELREAFAKVDTDGNGYISCNELNDLFKAACLPLPGYRVREITENLMAT 60
Query: 626 GDLDRDGRISFDEFIKVFHGLKSTEVAKTFRKAINKKEGICAIGGTSEQSSVGTQHSYSE 805
GDLDRDGRISFDEFIKVFHGLKSTEVAKTFRKAINKKEGICAIGGTSEQSSVGTQHSYSE
Sbjct: 61 GDLDRDGRISFDEFIKVFHGLKSTEVAKTFRKAINKKEGICAIGGTSEQSSVGTQHSYSE 120
Query: 806 EEKYAFVNWINKALENDPDCRHVIPMDPNTNDLFSAVGDGIVLCKMINLSVPDTIDERTI 985
EEKYAFVNWINKALENDPDCRHVIPMDPNTNDLFSAVGDGIVLCKMINLSVPDTIDERTI
Sbjct: 121 EEKYAFVNWINKALENDPDCRHVIPMDPNTNDLFSAVGDGIVLCKMINLSVPDTIDERTI 180
Query: 986 NKKKLTPFTIQENLNLALNSASAIGCHVVNIGAEDLKEGKPYLVLGLLWQVIKIGLFADI 1165
NKKKLTPFTIQENLNLALNSASAIGCHVVNIGAEDLKEGKPYLVLGLLWQVIKIGLFADI
Sbjct: 181 NKKKLTPFTIQENLNLALNSASAIGCHVVNIGAEDLKEGKPYLVLGLLWQVIKIGLFADI 240
Query: 1166 ELSRNEALAALLREGESLEDLMKLSPEELLLRWANYHLENAGCNKINNFSSDIKDSKAYY 1345
ELSRNEALAALLREGESLEDLMKLSPEELLLRWANYHLENAGCNKINNFSSDIKDSKAYY
Sbjct: 241 ELSRNEALAALLREGESLEDLMKLSPEELLLRWANYHLENAGCNKINNFSSDIKDSKAYY 300
Query: 1346 HLLEQVAPKGDEEGIPAVVIDMSGLREKDDIQRAECMLQQAERLGCRQFVTAPMWSEGTP 1525
HLLEQVAPKGDEEGIPAVVIDMSGLREKDDIQRAECMLQQAERLGCRQFVTA G P
Sbjct: 301 HLLEQVAPKGDEEGIPAVVIDMSGLREKDDIQRAECMLQQAERLGCRQFVTATDVVRGNP 360
Query: 1526 R*TW-XXXXXXHRYPALHKPETQTSTGGLLK 1615
+ +RYPALHKPE Q G L+
Sbjct: 361 KLNLAFIANLFNRYPALHKPENQDIDWGALE 391
Score = 81.3 bits (199), Expect = 2e-15
Identities = 41/62 (66%), Positives = 47/62 (75%), Gaps = 1/62 (1%)
Frame = +1
Query: 1498 STDVVRGNPKVNLAFIATS-SQIPRPAQTRDPDIDWGALESETREERTFRNWMNSLXCXX 1674
+TDVVRGNPK+NLAFIA ++ P + + DIDWGALE ETREERTFRNWMNSL
Sbjct: 352 ATDVVRGNPKLNLAFIANLFNRYPALHKPENQDIDWGALEGETREERTFRNWMNSLGVNP 411
Query: 1675 RV 1680
RV
Sbjct: 412 RV 413
Score = 50.4 bits (119), Expect = 3e-06
Identities = 60/254 (23%), Positives = 105/254 (41%), Gaps = 14/254 (5%)
Frame = +2
Query: 809 EKYAFVNWINKALENDPDCRHVIPMDPNTNDLFSAVGDGIVLCKMIN-LSVPDTIDERTI 985
E+ F NW+N + ++P N L+S + D +V+ ++ + VP +D +
Sbjct: 396 EERTFRNWMNS-----------LGVNPRVNHLYSDLSDALVIFQLYEKIKVP--VDWNRV 442
Query: 986 NK----------KKLTPFTIQENLNLALN-SASAIGCHVVNIGAEDLKEGKPYLVLGLLW 1132
NK KKL EN N A+ + +V IG +DL EG L L L+W
Sbjct: 443 NKPPYPKLGGNMKKL------ENCNYAVELGKNQAKFSLVGIGGQDLNEGNRTLTLALVW 496
Query: 1133 QVIKIGLFADIELSRNEALAALLREGESLEDLMKLSPEELLLRWANYHLENAG-CNKINN 1309
Q L R L L E + K++ +++++ W N L+ AG I++
Sbjct: 497 Q-----------LMRRYTLNIL----EEIGGGQKVN-DDIIVNWVNETLKEAGKSTSISS 540
Query: 1310 FSS-DIKDSKAYYHLLEQVAPKGDEEGIPAVVIDMSGLREKDDIQRAECMLQQAERLGCR 1486
F I S L++ + P I ++ L +++ + A+ + A ++G R
Sbjct: 541 FKDPKISTSLPVLDLIDAIQP----GSINYDLLKTENLNDEEKLNNAKYAISMARKIGAR 596
Query: 1487 QFVTAPMWSEGTPR 1528
+ E P+
Sbjct: 597 VYALPEDLVEVNPK 610
>ref|XP_003360471.1| PREDICTED: plastin-3 [Sus scrofa].
Length = 630
Score = 570 bits (1470), Expect = e-163
Identities = 284/392 (72%), Positives = 331/392 (84%), Gaps = 1/392 (0%)
Frame = +2
Query: 443 KMARGSVSDEEMMELREAFAKVDTDGNGYISCNELNDLFKAACLPLPGYRVREITENLMA 622
+MA +S +E+ EL+EAFAKVD + NG+I EL++LFK A +PLPGY+VREI + LM
Sbjct: 3 EMATTQISKDELDELKEAFAKVDLNSNGFICDYELHELFKEANMPLPGYKVREIIQKLML 62
Query: 623 TGDLDRDGRISFDEFIKVFHGLKSTEVAKTFRKAINKKEGICAIGGTSEQSSVGTQHSYS 802
GD ++DG+ISFDEF+ +F +KS+++AKTFRKAIN+KEGICA+GGTSE SS GTQHSYS
Sbjct: 63 DGDRNKDGKISFDEFVYIFQEVKSSDIAKTFRKAINRKEGICALGGTSELSSEGTQHSYS 122
Query: 803 EEEKYAFVNWINKALENDPDCRHVIPMDPNTNDLFSAVGDGIVLCKMINLSVPDTIDERT 982
EEEKYAFVNWINKALENDPDCRHVIPM+PNT+DLF AVGDGIVLCKMINLSVPDTIDER
Sbjct: 123 EEEKYAFVNWINKALENDPDCRHVIPMNPNTDDLFKAVGDGIVLCKMINLSVPDTIDERA 182
Query: 983 INKKKLTPFTIQENLNLALNSASAIGCHVVNIGAEDLKEGKPYLVLGLLWQVIKIGLFAD 1162
INKKKLTPF IQENLNLALNSASAIGCHVVNIGAEDL+ GKP+LVLGLLWQ+IKIGLFAD
Sbjct: 183 INKKKLTPFIIQENLNLALNSASAIGCHVVNIGAEDLRAGKPHLVLGLLWQIIKIGLFAD 242
Query: 1163 IELSRNEALAALLREGESLEDLMKLSPEELLLRWANYHLENAGCNKINNFSSDIKDSKAY 1342
IELSRNEALAALLR+GE+LE+LMKLSPEELLLRWAN+HLEN+G KINNFS+DIKDSKAY
Sbjct: 243 IELSRNEALAALLRDGETLEELMKLSPEELLLRWANFHLENSGWQKINNFSADIKDSKAY 302
Query: 1343 YHLLEQVAPKGDEEGIPAVVIDMSGLREKDDIQRAECMLQQAERLGCRQFVTAPMWSEGT 1522
+HLL Q+APKG +EG P + I+MSG E DD++RAE MLQQA++LGCRQFVT G
Sbjct: 303 FHLLNQIAPKGQKEGEPRIDINMSGFNETDDLKRAESMLQQADKLGCRQFVTPADVVSGN 362
Query: 1523 PR*TW-XXXXXXHRYPALHKPETQTSTGGLLK 1615
P+ ++YPAL KPE Q LL+
Sbjct: 363 PKLNLAFVANLFNKYPALTKPENQDIDWTLLE 394
Score = 70.1 bits (170), Expect = 4e-12
Identities = 34/54 (62%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Frame = +1
Query: 1504 DVVRGNPKVNLAFIATS-SQIPRPAQTRDPDIDWGALESETREERTFRNWMNSL 1662
DVV GNPK+NLAF+A ++ P + + DIDW LE ETREERTFRNWMNSL
Sbjct: 357 DVVSGNPKLNLAFVANLFNKYPALTKPENQDIDWTLLEGETREERTFRNWMNSL 410
Score = 53.5 bits (127), Expect = 3e-07
Identities = 59/236 (25%), Positives = 96/236 (40%), Gaps = 8/236 (3%)
Frame = +2
Query: 809 EKYAFVNWINKALENDPDCRHVIPMDPNTNDLFSAVGDGIVLCKMIN-LSVPDTIDERTI 985
E+ F NW+N + ++P+ N L++ + D +V+ ++ + VP +D +
Sbjct: 399 EERTFRNWMNS-----------LGVNPHVNHLYADLQDALVILQLYERIKVP--VDWSKV 445
Query: 986 NKKKLTPFTIQENLNLALNSASAIGCH-----VVNIGAEDLKEGKPYLVLGLLWQVIKIG 1150
NK N A +G H +V IG +DL +G L L L+WQ
Sbjct: 446 NKPPYPKLGANMKKLENCNYAVELGKHPAKFSLVGIGGQDLNDGNQTLTLALVWQ----- 500
Query: 1151 LFADIELSRNEALAALLREGESLEDLMKLSPEELLLRWANYHLENAG-CNKINNF-SSDI 1324
L R L L E L D K + +++++ W N L AG I +F I
Sbjct: 501 ------LMRRYTLNVL----EDLGDGQKAN-DDIIVNWVNRTLSEAGKSTSIQSFKDKTI 549
Query: 1325 KDSKAYYHLLEQVAPKGDEEGIPAVVIDMSGLREKDDIQRAECMLQQAERLGCRQF 1492
S A L++ + P I ++ L E D A+ + A R+G R +
Sbjct: 550 SSSLAVVDLIDAIQP----GCINYDLVKSGNLSEDDKHNNAKYAVSMARRIGARVY 601
>ref|XP_001925971.3| PREDICTED: plastin-3 isoform 1 [Sus scrofa].
Length = 630
Score = 570 bits (1470), Expect = e-163
Identities = 284/392 (72%), Positives = 331/392 (84%), Gaps = 1/392 (0%)
Frame = +2
Query: 443 KMARGSVSDEEMMELREAFAKVDTDGNGYISCNELNDLFKAACLPLPGYRVREITENLMA 622
+MA +S +E+ EL+EAFAKVD + NG+I EL++LFK A +PLPGY+VREI + LM
Sbjct: 3 EMATTQISKDELDELKEAFAKVDLNSNGFICDYELHELFKEANMPLPGYKVREIIQKLML 62
Query: 623 TGDLDRDGRISFDEFIKVFHGLKSTEVAKTFRKAINKKEGICAIGGTSEQSSVGTQHSYS 802
GD ++DG+ISFDEF+ +F +KS+++AKTFRKAIN+KEGICA+GGTSE SS GTQHSYS
Sbjct: 63 DGDRNKDGKISFDEFVYIFQEVKSSDIAKTFRKAINRKEGICALGGTSELSSEGTQHSYS 122
Query: 803 EEEKYAFVNWINKALENDPDCRHVIPMDPNTNDLFSAVGDGIVLCKMINLSVPDTIDERT 982
EEEKYAFVNWINKALENDPDCRHVIPM+PNT+DLF AVGDGIVLCKMINLSVPDTIDER
Sbjct: 123 EEEKYAFVNWINKALENDPDCRHVIPMNPNTDDLFKAVGDGIVLCKMINLSVPDTIDERA 182
Query: 983 INKKKLTPFTIQENLNLALNSASAIGCHVVNIGAEDLKEGKPYLVLGLLWQVIKIGLFAD 1162
INKKKLTPF IQENLNLALNSASAIGCHVVNIGAEDL+ GKP+LVLGLLWQ+IKIGLFAD
Sbjct: 183 INKKKLTPFIIQENLNLALNSASAIGCHVVNIGAEDLRAGKPHLVLGLLWQIIKIGLFAD 242
Query: 1163 IELSRNEALAALLREGESLEDLMKLSPEELLLRWANYHLENAGCNKINNFSSDIKDSKAY 1342
IELSRNEALAALLR+GE+LE+LMKLSPEELLLRWAN+HLEN+G KINNFS+DIKDSKAY
Sbjct: 243 IELSRNEALAALLRDGETLEELMKLSPEELLLRWANFHLENSGWQKINNFSADIKDSKAY 302
Query: 1343 YHLLEQVAPKGDEEGIPAVVIDMSGLREKDDIQRAECMLQQAERLGCRQFVTAPMWSEGT 1522
+HLL Q+APKG +EG P + I+MSG E DD++RAE MLQQA++LGCRQFVT G
Sbjct: 303 FHLLNQIAPKGQKEGEPRIDINMSGFNETDDLKRAESMLQQADKLGCRQFVTPADVVSGN 362
Query: 1523 PR*TW-XXXXXXHRYPALHKPETQTSTGGLLK 1615
P+ ++YPAL KPE Q LL+
Sbjct: 363 PKLNLAFVANLFNKYPALTKPENQDIDWTLLE 394
Score = 70.1 bits (170), Expect = 4e-12
Identities = 34/54 (62%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Frame = +1
Query: 1504 DVVRGNPKVNLAFIATS-SQIPRPAQTRDPDIDWGALESETREERTFRNWMNSL 1662
DVV GNPK+NLAF+A ++ P + + DIDW LE ETREERTFRNWMNSL
Sbjct: 357 DVVSGNPKLNLAFVANLFNKYPALTKPENQDIDWTLLEGETREERTFRNWMNSL 410
Score = 53.5 bits (127), Expect = 3e-07
Identities = 59/236 (25%), Positives = 96/236 (40%), Gaps = 8/236 (3%)
Frame = +2
Query: 809 EKYAFVNWINKALENDPDCRHVIPMDPNTNDLFSAVGDGIVLCKMIN-LSVPDTIDERTI 985
E+ F NW+N + ++P+ N L++ + D +V+ ++ + VP +D +
Sbjct: 399 EERTFRNWMNS-----------LGVNPHVNHLYADLQDALVILQLYERIKVP--VDWSKV 445
Query: 986 NKKKLTPFTIQENLNLALNSASAIGCH-----VVNIGAEDLKEGKPYLVLGLLWQVIKIG 1150
NK N A +G H +V IG +DL +G L L L+WQ
Sbjct: 446 NKPPYPKLGANMKKLENCNYAVELGKHPAKFSLVGIGGQDLNDGNQTLTLALVWQ----- 500
Query: 1151 LFADIELSRNEALAALLREGESLEDLMKLSPEELLLRWANYHLENAG-CNKINNF-SSDI 1324
L R L L E L D K + +++++ W N L AG I +F I
Sbjct: 501 ------LMRRYTLNVL----EDLGDGQKAN-DDIIVNWVNRTLSEAGKSTSIQSFKDKTI 549
Query: 1325 KDSKAYYHLLEQVAPKGDEEGIPAVVIDMSGLREKDDIQRAECMLQQAERLGCRQF 1492
S A L++ + P I ++ L E D A+ + A R+G R +
Sbjct: 550 SSSLAVVDLIDAIQP----GCINYDLVKSGNLSEDDKHNNAKYAVSMARRIGARVY 601
>ref|XP_003360472.1| PREDICTED: plastin-3 [Sus scrofa].
Length = 624
Score = 541 bits (1393), Expect = e-154
Identities = 273/382 (71%), Positives = 315/382 (82%), Gaps = 10/382 (2%)
Frame = +2
Query: 500 AKVDTDGNGYISCNELNDLFKAACLPLPGYRVREITENLMATGDLDRDGRISFDEFIKVF 679
A D + NG+I EL++LFK A +PLPGY+VREI + LM GD ++DG+ISFDEF+ +F
Sbjct: 7 AMEDLNSNGFICDYELHELFKEANMPLPGYKVREIIQKLMLDGDRNKDGKISFDEFVYIF 66
Query: 680 HGLKSTEVAKTFRKAINKKEGICAIGGTSEQSSVGTQHSYSEEEKYAFVNWINKALENDP 859
+KS+++AKTFRKAIN+KEGICA+GGTSE SS GTQHSYSEEEKYAFVNWINKALENDP
Sbjct: 67 QEVKSSDIAKTFRKAINRKEGICALGGTSELSSEGTQHSYSEEEKYAFVNWINKALENDP 126
Query: 860 DCRHVIPMDPNTNDLFSAVGDGIVLCKMINLSVPDTIDERTINKKKLTPFTIQENLNLAL 1039
DCRHVIPM+PNT+DLF AVGDGIVLCKMINLSVPDTIDER INKKKLTPF IQENLNLAL
Sbjct: 127 DCRHVIPMNPNTDDLFKAVGDGIVLCKMINLSVPDTIDERAINKKKLTPFIIQENLNLAL 186
Query: 1040 NSASAIGCHVVNIGAEDLKEGKPYLVLGLLWQVIKIGLFADIELSRNEALAALLREGESL 1219
NSASAIGCHVVNIGAEDL+ GKP+LVLGLLWQ+IKIGLFADIELSRNEALAALLR+GE+L
Sbjct: 187 NSASAIGCHVVNIGAEDLRAGKPHLVLGLLWQIIKIGLFADIELSRNEALAALLRDGETL 246
Query: 1220 EDLMKLSPEELLLRWANYHLENAGCNKINNFSSDI---------KDSKAYYHLLEQVAPK 1372
E+LMKLSPEELLLRWAN+HLEN+G KINNFS+DI KDSKAY+HLL Q+APK
Sbjct: 247 EELMKLSPEELLLRWANFHLENSGWQKINNFSADIKLIDFSNSVKDSKAYFHLLNQIAPK 306
Query: 1373 GDEEGIPAVVIDMSGLREKDDIQRAECMLQQAERLGCRQFVTAPMWSEGTPR*TW-XXXX 1549
G +EG P + I+MSG E DD++RAE MLQQA++LGCRQFVT G P+
Sbjct: 307 GQKEGEPRIDINMSGFNETDDLKRAESMLQQADKLGCRQFVTPADVVSGNPKLNLAFVAN 366
Query: 1550 XXHRYPALHKPETQTSTGGLLK 1615
++YPAL KPE Q LL+
Sbjct: 367 LFNKYPALTKPENQDIDWTLLE 388
Score = 70.1 bits (170), Expect = 4e-12
Identities = 34/54 (62%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Frame = +1
Query: 1504 DVVRGNPKVNLAFIATS-SQIPRPAQTRDPDIDWGALESETREERTFRNWMNSL 1662
DVV GNPK+NLAF+A ++ P + + DIDW LE ETREERTFRNWMNSL
Sbjct: 351 DVVSGNPKLNLAFVANLFNKYPALTKPENQDIDWTLLEGETREERTFRNWMNSL 404
Score = 53.5 bits (127), Expect = 3e-07
Identities = 59/236 (25%), Positives = 96/236 (40%), Gaps = 8/236 (3%)
Frame = +2
Query: 809 EKYAFVNWINKALENDPDCRHVIPMDPNTNDLFSAVGDGIVLCKMIN-LSVPDTIDERTI 985
E+ F NW+N + ++P+ N L++ + D +V+ ++ + VP +D +
Sbjct: 393 EERTFRNWMNS-----------LGVNPHVNHLYADLQDALVILQLYERIKVP--VDWSKV 439
Query: 986 NKKKLTPFTIQENLNLALNSASAIGCH-----VVNIGAEDLKEGKPYLVLGLLWQVIKIG 1150
NK N A +G H +V IG +DL +G L L L+WQ
Sbjct: 440 NKPPYPKLGANMKKLENCNYAVELGKHPAKFSLVGIGGQDLNDGNQTLTLALVWQ----- 494
Query: 1151 LFADIELSRNEALAALLREGESLEDLMKLSPEELLLRWANYHLENAG-CNKINNF-SSDI 1324
L R L L E L D K + +++++ W N L AG I +F I
Sbjct: 495 ------LMRRYTLNVL----EDLGDGQKAN-DDIIVNWVNRTLSEAGKSTSIQSFKDKTI 543
Query: 1325 KDSKAYYHLLEQVAPKGDEEGIPAVVIDMSGLREKDDIQRAECMLQQAERLGCRQF 1492
S A L++ + P I ++ L E D A+ + A R+G R +
Sbjct: 544 SSSLAVVDLIDAIQP----GCINYDLVKSGNLSEDDKHNNAKYAVSMARRIGARVY 595
>ref|XP_003135372.1| PREDICTED: plastin-3 isoform 2 [Sus scrofa].
Length = 603
Score = 524 bits (1350), Expect = e-149
Identities = 269/392 (68%), Positives = 310/392 (79%), Gaps = 1/392 (0%)
Frame = +2
Query: 443 KMARGSVSDEEMMELREAFAKVDTDGNGYISCNELNDLFKAACLPLPGYRVREITENLMA 622
+MA +S +E+ EL+EAFAKVD + NG+I EL++LFK A +PLPGY
Sbjct: 3 EMATTQISKDELDELKEAFAKVDLNSNGFICDYELHELFKEANMPLPGY----------- 51
Query: 623 TGDLDRDGRISFDEFIKVFHGLKSTEVAKTFRKAINKKEGICAIGGTSEQSSVGTQHSYS 802
K+F +KS+++AKTFRKAIN+KEGICA+GGTSE SS GTQHSYS
Sbjct: 52 ----------------KIFQEVKSSDIAKTFRKAINRKEGICALGGTSELSSEGTQHSYS 95
Query: 803 EEEKYAFVNWINKALENDPDCRHVIPMDPNTNDLFSAVGDGIVLCKMINLSVPDTIDERT 982
EEEKYAFVNWINKALENDPDCRHVIPM+PNT+DLF AVGDGIVLCKMINLSVPDTIDER
Sbjct: 96 EEEKYAFVNWINKALENDPDCRHVIPMNPNTDDLFKAVGDGIVLCKMINLSVPDTIDERA 155
Query: 983 INKKKLTPFTIQENLNLALNSASAIGCHVVNIGAEDLKEGKPYLVLGLLWQVIKIGLFAD 1162
INKKKLTPF IQENLNLALNSASAIGCHVVNIGAEDL+ GKP+LVLGLLWQ+IKIGLFAD
Sbjct: 156 INKKKLTPFIIQENLNLALNSASAIGCHVVNIGAEDLRAGKPHLVLGLLWQIIKIGLFAD 215
Query: 1163 IELSRNEALAALLREGESLEDLMKLSPEELLLRWANYHLENAGCNKINNFSSDIKDSKAY 1342
IELSRNEALAALLR+GE+LE+LMKLSPEELLLRWAN+HLEN+G KINNFS+DIKDSKAY
Sbjct: 216 IELSRNEALAALLRDGETLEELMKLSPEELLLRWANFHLENSGWQKINNFSADIKDSKAY 275
Query: 1343 YHLLEQVAPKGDEEGIPAVVIDMSGLREKDDIQRAECMLQQAERLGCRQFVTAPMWSEGT 1522
+HLL Q+APKG +EG P + I+MSG E DD++RAE MLQQA++LGCRQFVT G
Sbjct: 276 FHLLNQIAPKGQKEGEPRIDINMSGFNETDDLKRAESMLQQADKLGCRQFVTPADVVSGN 335
Query: 1523 PR*TW-XXXXXXHRYPALHKPETQTSTGGLLK 1615
P+ ++YPAL KPE Q LL+
Sbjct: 336 PKLNLAFVANLFNKYPALTKPENQDIDWTLLE 367
Score = 70.1 bits (170), Expect = 4e-12
Identities = 34/54 (62%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Frame = +1
Query: 1504 DVVRGNPKVNLAFIATS-SQIPRPAQTRDPDIDWGALESETREERTFRNWMNSL 1662
DVV GNPK+NLAF+A ++ P + + DIDW LE ETREERTFRNWMNSL
Sbjct: 330 DVVSGNPKLNLAFVANLFNKYPALTKPENQDIDWTLLEGETREERTFRNWMNSL 383
Score = 53.5 bits (127), Expect = 3e-07
Identities = 59/236 (25%), Positives = 96/236 (40%), Gaps = 8/236 (3%)
Frame = +2
Query: 809 EKYAFVNWINKALENDPDCRHVIPMDPNTNDLFSAVGDGIVLCKMIN-LSVPDTIDERTI 985
E+ F NW+N + ++P+ N L++ + D +V+ ++ + VP +D +
Sbjct: 372 EERTFRNWMNS-----------LGVNPHVNHLYADLQDALVILQLYERIKVP--VDWSKV 418
Query: 986 NKKKLTPFTIQENLNLALNSASAIGCH-----VVNIGAEDLKEGKPYLVLGLLWQVIKIG 1150
NK N A +G H +V IG +DL +G L L L+WQ
Sbjct: 419 NKPPYPKLGANMKKLENCNYAVELGKHPAKFSLVGIGGQDLNDGNQTLTLALVWQ----- 473
Query: 1151 LFADIELSRNEALAALLREGESLEDLMKLSPEELLLRWANYHLENAG-CNKINNF-SSDI 1324
L R L L E L D K + +++++ W N L AG I +F I
Sbjct: 474 ------LMRRYTLNVL----EDLGDGQKAN-DDIIVNWVNRTLSEAGKSTSIQSFKDKTI 522
Query: 1325 KDSKAYYHLLEQVAPKGDEEGIPAVVIDMSGLREKDDIQRAECMLQQAERLGCRQF 1492
S A L++ + P I ++ L E D A+ + A R+G R +
Sbjct: 523 SSSLAVVDLIDAIQP----GCINYDLVKSGNLSEDDKHNNAKYAVSMARRIGARVY 574
>ref|XP_003357898.1| PREDICTED: hypothetical protein LOC100623452 [Sus scrofa].
Length = 513
Score = 496 bits (1277), Expect = e-140
Identities = 246/246 (100%), Positives = 246/246 (100%)
Frame = +2
Query: 446 MARGSVSDEEMMELREAFAKVDTDGNGYISCNELNDLFKAACLPLPGYRVREITENLMAT 625
MARGSVSDEEMMELREAFAKVDTDGNGYISCNELNDLFKAACLPLPGYRVREITENLMAT
Sbjct: 1 MARGSVSDEEMMELREAFAKVDTDGNGYISCNELNDLFKAACLPLPGYRVREITENLMAT 60
Query: 626 GDLDRDGRISFDEFIKVFHGLKSTEVAKTFRKAINKKEGICAIGGTSEQSSVGTQHSYSE 805
GDLDRDGRISFDEFIKVFHGLKSTEVAKTFRKAINKKEGICAIGGTSEQSSVGTQHSYSE
Sbjct: 61 GDLDRDGRISFDEFIKVFHGLKSTEVAKTFRKAINKKEGICAIGGTSEQSSVGTQHSYSE 120
Query: 806 EEKYAFVNWINKALENDPDCRHVIPMDPNTNDLFSAVGDGIVLCKMINLSVPDTIDERTI 985
EEKYAFVNWINKALENDPDCRHVIPMDPNTNDLFSAVGDGIVLCKMINLSVPDTIDERTI
Sbjct: 121 EEKYAFVNWINKALENDPDCRHVIPMDPNTNDLFSAVGDGIVLCKMINLSVPDTIDERTI 180
Query: 986 NKKKLTPFTIQENLNLALNSASAIGCHVVNIGAEDLKEGKPYLVLGLLWQVIKIGLFADI 1165
NKKKLTPFTIQENLNLALNSASAIGCHVVNIGAEDLKEGKPYLVLGLLWQVIKIGLFADI
Sbjct: 181 NKKKLTPFTIQENLNLALNSASAIGCHVVNIGAEDLKEGKPYLVLGLLWQVIKIGLFADI 240
Query: 1166 ELSRNE 1183
ELSRNE
Sbjct: 241 ELSRNE 246
>ref|XP_003358642.1| PREDICTED: hypothetical protein LOC100516400 [Sus scrofa].
Length = 1388
Score = 308 bits (789), Expect = 6e-84
Identities = 155/230 (67%), Positives = 184/230 (80%), Gaps = 1/230 (0%)
Frame = +2
Query: 929 VLCKMINLSVPDTIDERTINKKKLTPFTIQENLNLALNSASAIGCHVVNIGAEDLKEGKP 1108
+L KMINLS PDTIDER INKKKLTPFTI ENLNLALNSASAIGC VVNIGA+DLKEGKP
Sbjct: 16 LLSKMINLSEPDTIDERAINKKKLTPFTISENLNLALNSASAIGCTVVNIGAQDLKEGKP 75
Query: 1109 YLVLGLLWQVIKIGLFADIELSRNEALAALLREGESLEDLMKLSPEELLLRWANYHLENA 1288
+LVLGLLWQ+IK+GLFADIE+SRNEAL ALL+EGE LE+L+KLSPEELLLRW NYHL NA
Sbjct: 76 HLVLGLLWQIIKVGLFADIEISRNEALIALLKEGEDLEELLKLSPEELLLRWVNYHLTNA 135
Query: 1289 GCNKINNFSSDIKDSKAYYHLLEQVAPKGDEEGIPAVVIDMSGLREKDDIQRAECMLQQA 1468
G I+NFS DIKDS+AY+HLL Q+APKGD + PA+ ID+SG E++D++RAE ML++A
Sbjct: 136 GWRTISNFSQDIKDSRAYFHLLNQIAPKGDRDDGPAIDIDLSGFNEQNDLKRAEFMLREA 195
Query: 1469 ERLGCRQFVTAPMWSEGTPR*TW-XXXXXXHRYPALHKPETQTSTGGLLK 1615
++LGCRQFVT G P+ + YP+LHKP+ LL+
Sbjct: 196 DKLGCRQFVTPADVVSGNPKLNLAFVANLFNTYPSLHKPDNNNIDINLLE 245
Score = 58.2 bits (139), Expect = 1e-08
Identities = 30/54 (55%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Frame = +1
Query: 1504 DVVRGNPKVNLAFIATS-SQIPRPAQTRDPDIDWGALESETREERTFRNWMNSL 1662
DVV GNPK+NLAF+A + P + + +ID LE E++EERTFRNWMNSL
Sbjct: 208 DVVSGNPKLNLAFVANLFNTYPSLHKPDNNNIDINLLEGESKEERTFRNWMNSL 261
>ref|XP_003127855.2| PREDICTED: microtubule-actin cross-linking factor 1, isoforms 1/2/3/5
isoform 1, partial [Sus scrofa].
Length = 2018
Score = 63.9 bits (154), Expect = 3e-10
Identities = 58/231 (25%), Positives = 99/231 (42%)
Frame = +2
Query: 809 EKYAFVNWINKALENDPDCRHVIPMDPNTNDLFSAVGDGIVLCKMINLSVPDTIDERTIN 988
+K F W+NK H++ + + NDL+ + DG L ++ + +
Sbjct: 6 QKKTFTKWVNK---------HLMKVRKHINDLYEDLRDGHNLISLLEVLSGIKLPR---- 52
Query: 989 KKKLTPFTIQENLNLALNSASAIGCHVVNIGAEDLKEGKPYLVLGLLWQVIKIGLFADIE 1168
+K F +N+ +AL+ +VNI +D+ +G P L LGL+W +I +DI
Sbjct: 53 EKGRMRFHRLQNVQIALDFLKQRQVKLVNIRNDDITDGNPKLTLGLIWTIILHFQISDIY 112
Query: 1169 LSRNEALAALLREGESLEDLMKLSPEELLLRWANYHLENAGCNKINNFSSDIKDSKAYYH 1348
+S GES + +S +E LL W K NFSS D K +
Sbjct: 113 IS-----------GESGD----MSAKEKLLLWTQKVTAGYTGIKCTNFSSCWSDGKMFNA 157
Query: 1349 LLEQVAPKGDEEGIPAVVIDMSGLREKDDIQRAECMLQQAERLGCRQFVTA 1501
L+ + P ++DM ++ + + + E + AERLG + + A
Sbjct: 158 LIHRYRPD---------LVDMERVQIQSNRENLEQAFEVAERLGVTRLLDA 199
>ref|XP_001927057.3| PREDICTED: spectrin beta chain, erythrocyte [Sus scrofa].
Length = 2138
Score = 61.2 bits (147), Expect = 2e-09
Identities = 57/224 (25%), Positives = 94/224 (41%), Gaps = 2/224 (0%)
Frame = +2
Query: 809 EKYAFVNWINKALENDPDCRHVIPMDPNTNDLFSAVGDGIVLCKMINLSVPDTIDERTIN 988
+K F W+N H+ + DL+ + DG +L K++ + + + + T
Sbjct: 56 QKKTFTKWVNS---------HLARVSCRITDLYKDLRDGRMLIKLLEVLSGEMLPKPTKG 106
Query: 989 KKKLTPFTIQENLNLALNSASAIGCHVVNIGAEDLKEGKPYLVLGLLWQVIKIGLFADIE 1168
K ++ EN++ AL H+ N+G+ D+ +G LVLGL+W +I DI
Sbjct: 107 KMRIHCL---ENVDKALQFLKEQRVHLENMGSHDIVDGNHRLVLGLIWTIILRFQIQDIV 163
Query: 1169 LSRNEALAALLREGESLEDLMKLSPEELLLRWANYHLENAGCNKIN--NFSSDIKDSKAY 1342
+ E RE S +D LL W ++ AG +N NF+S KD A+
Sbjct: 164 VQTQEG-----RETRSAKD--------ALLLWC--QMKTAGYPNVNVTNFTSSWKDGLAF 208
Query: 1343 YHLLEQVAPKGDEEGIPAVVIDMSGLREKDDIQRAECMLQQAER 1474
L+ + P +ID L++ + E AER
Sbjct: 209 NALIHKHRPD---------LIDFDKLKDSNARHNLEHAFDVAER 243
>ref|XP_003354869.1| PREDICTED: spectrin beta chain, brain 1 isoform 2 [Sus scrofa].
Length = 2155
Score = 56.2 bits (134), Expect = 5e-08
Identities = 44/189 (23%), Positives = 85/189 (44%), Gaps = 2/189 (1%)
Frame = +2
Query: 809 EKYAFVNWINKALENDPDCRHVIPMDPNTNDLFSAVGDGIVLCKMINLSVPDTIDERTIN 988
+K F W+N H+ + DL++ + DG +L K++ + + + + T
Sbjct: 43 QKKTFTKWVNS---------HLARVSCRITDLYTDLRDGRMLIKLLEVLSGERLPKPTKG 93
Query: 989 KKKLTPFTIQENLNLALNSASAIGCHVVNIGAEDLKEGKPYLVLGLLWQVIKIGLFADIE 1168
+ ++ EN++ AL H+ N+G+ D+ +G L LGL+W +I DI
Sbjct: 94 RMRIHCL---ENVDKALQFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDIS 150
Query: 1169 LSRNEALAALLREGESLEDLMKLSPEELLLRWANYHLENAGCNKIN--NFSSDIKDSKAY 1342
+ E+ ++ K S ++ LL W ++ AG +N NF++ +D A+
Sbjct: 151 V-------------ETEDNKEKKSAKDALLLWC--QMKTAGYPNVNIHNFTTSWRDGMAF 195
Query: 1343 YHLLEQVAP 1369
L+ + P
Sbjct: 196 NALIHKHRP 204
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 41,075,221
Number of extensions: 1101684
Number of successful extensions: 3596
Number of sequences better than 1.0e-05: 12
Number of HSP's gapped: 3534
Number of HSP's successfully gapped: 23
Length of query: 560
Length of database: 11,343,932
Length adjustment: 104
Effective length of query: 456
Effective length of database: 8,754,644
Effective search space: 3992117664
Effective search space used: 3992117664
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007283
(1681 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr11 422 e-115
Sscrofa_Chr13 68 2e-08
>Sscrofa_Chr11
|| Length = 87690581
Score = 422 bits (213), Expect = e-115
Identities = 223/225 (99%), Gaps = 1/225 (0%)
Strand = Plus / Plus
Query: 1 caaggagatggcgtt-agcttgttgcaggggtgcaccccctctctcctaggctctttcct 59
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21569933 caaggagatggcgtttagcttgttgcaggggtgcaccccctctctcctaggctctttcct 21569992
Query: 60 taaaagtgaatcatttgttcgtcctcgctgtcagtagctaggcaccgggacattgcgtgg 119
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 21569993 taaaagtgaatcatttgttcgtcctcgctgtcagtagctaggcaccgggacattgcatgg 21570052
Query: 120 gcaactaggggcagagctagaagggcaggtagcaaggctgaccttggccttgttatctga 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21570053 gcaactaggggcagagctagaagggcaggtagcaaggctgaccttggccttgttatctga 21570112
Query: 180 aatcagacaggtttcagtagcccagtgcctgcctgcgagacagct 224
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21570113 aatcagacaggtttcagtagcccagtgcctgcctgcgagacagct 21570157
Score = 335 bits (169), Expect = 5e-89
Identities = 169/169 (100%)
Strand = Plus / Plus
Query: 1016 caggagaatttgaacttggctctgaactctgcttcagccatcgggtgccacgtggttaat 1075
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21658292 caggagaatttgaacttggctctgaactctgcttcagccatcgggtgccacgtggttaat 21658351
Query: 1076 atcggggctgaagacctaaaggaagggaagccttacctggtcctgggactgttgtggcag 1135
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21658352 atcggggctgaagacctaaaggaagggaagccttacctggtcctgggactgttgtggcag 21658411
Query: 1136 gtcatcaagattgggttgttcgccgacattgagctcagcagaaatgaag 1184
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21658412 gtcatcaagattgggttgttcgccgacattgagctcagcagaaatgaag 21658460
Score = 331 bits (167), Expect = 7e-88
Identities = 167/167 (100%)
Strand = Plus / Plus
Query: 509 gacaccgatggcaatggatacatcagctgtaatgagctgaatgacttgttcaaggctgcc 568
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21650597 gacaccgatggcaatggatacatcagctgtaatgagctgaatgacttgttcaaggctgcc 21650656
Query: 569 tgcttgcctctgcctgggtacagggtgagagaaatcacagaaaatctgatggctacaggt 628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21650657 tgcttgcctctgcctgggtacagggtgagagaaatcacagaaaatctgatggctacaggt 21650716
Query: 629 gacctggaccgggatgggaggatcagctttgacgagtttatcaaggt 675
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21650717 gacctggaccgggatgggaggatcagctttgacgagtttatcaaggt 21650763
Score = 309 bits (156), Expect = 3e-81
Identities = 190/196 (96%), Gaps = 4/196 (2%)
Strand = Plus / Plus
Query: 1423 ggagaaggatgacatccagagggcagagtgcatgctgcagcaggcagagaggctgggttg 1482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21666328 ggagaaggatgacatccagagggcagagtgcatgctgcagcaggcagagaggctgggttg 21666387
Query: 1483 ccggcagtttgtcacag-caccgatgtggtccgagggaaccccaaggtgaacttggcttt 1541
||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||
Sbjct: 21666388 ccggcagtttgtcacagccaccgatgtggtccgagggaaccccaagttgaacttggcttt 21666447
Query: 1542 tattgcc-acctcttc-acagataccccgccctgcacaaaccagag-acccagacatcga 1598
||||||| |||||||| ||||||||||||||||||||||||||||| ||| |||||||||
Sbjct: 21666448 tattgccaacctcttcaacagataccccgccctgcacaaaccagagaaccaagacatcga 21666507
Query: 1599 ctggggggctcttgaa 1614
||||||||||||||||
Sbjct: 21666508 ctggggggctcttgaa 21666523
Score = 289 bits (146), Expect = 2e-75
Identities = 146/146 (100%)
Strand = Plus / Plus
Query: 1183 agctctggctgctcttttgagagaaggggagagcctggaggatttgatgaaactctcccc 1242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21660885 agctctggctgctcttttgagagaaggggagagcctggaggatttgatgaaactctcccc 21660944
Query: 1243 cgaggagctcctgctgagatgggctaattaccacctggaaaacgcaggctgcaacaaaat 1302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21660945 cgaggagctcctgctgagatgggctaattaccacctggaaaacgcaggctgcaacaaaat 21661004
Query: 1303 caacaacttcagcagcgacatcaagg 1328
||||||||||||||||||||||||||
Sbjct: 21661005 caacaacttcagcagcgacatcaagg 21661030
Score = 270 bits (136), Expect = 2e-69
Identities = 136/136 (100%)
Strand = Plus / Plus
Query: 801 cagaggaagagaagtatgccttcgtcaactggataaacaaagccctggaaaatgaccccg 860
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21654431 cagaggaagagaagtatgccttcgtcaactggataaacaaagccctggaaaatgaccccg 21654490
Query: 861 actgtcggcacgtcatccccatggatccaaacaccaacgatctcttcagtgccgttggag 920
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21654491 actgtcggcacgtcatccccatggatccaaacaccaacgatctcttcagtgccgttggag 21654550
Query: 921 acggcatcgtcctttg 936
||||||||||||||||
Sbjct: 21654551 acggcatcgtcctttg 21654566
Score = 262 bits (132), Expect = 6e-67
Identities = 132/132 (100%)
Strand = Plus / Plus
Query: 672 aggtttttcatggcctgaaaagcacagaagttgccaagacctttagaaaagcaatcaaca 731
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21651196 aggtttttcatggcctgaaaagcacagaagttgccaagacctttagaaaagcaatcaaca 21651255
Query: 732 agaaggaagggatttgtgccatcgggggcacttcagagcagtctagtgttggcacccaac 791
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21651256 agaaggaagggatttgtgccatcgggggcacttcagagcagtctagtgttggcacccaac 21651315
Query: 792 actcctactcag 803
||||||||||||
Sbjct: 21651316 actcctactcag 21651327
Score = 224 bits (113), Expect = 1e-55
Identities = 113/113 (100%)
Strand = Plus / Plus
Query: 309 agtcacttcctgccttgtgaccacacacccggggttgacagagttgttctgcagatcaga 368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21570343 agtcacttcctgccttgtgaccacacacccggggttgacagagttgttctgcagatcaga 21570402
Query: 369 aagaaggggttctgggcacacgccagtaccgctgaggacagtttggctaccag 421
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21570403 aagaaggggttctgggcacacgccagtaccgctgaggacagtttggctaccag 21570455
Score = 196 bits (99), Expect = 3e-47
Identities = 99/99 (100%)
Strand = Plus / Plus
Query: 1326 aggactcgaaagcttattaccacctgcttgagcaggtggctcccaaaggcgacgaagaag 1385
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21663713 aggactcgaaagcttattaccacctgcttgagcaggtggctcccaaaggcgacgaagaag 21663772
Query: 1386 gcattcctgctgttgtgattgacatgtcaggactgaggg 1424
|||||||||||||||||||||||||||||||||||||||
Sbjct: 21663773 gcattcctgctgttgtgattgacatgtcaggactgaggg 21663811
Score = 180 bits (91), Expect = 2e-42
Identities = 91/91 (100%)
Strand = Plus / Plus
Query: 419 cagatctgttgccgaaagcaataaaaaatggccagaggatccgtatccgatgaagaaatg 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21649867 cagatctgttgccgaaagcaataaaaaatggccagaggatccgtatccgatgaagaaatg 21649926
Query: 479 atggagctcagagaagcttttgccaaagttg 509
|||||||||||||||||||||||||||||||
Sbjct: 21649927 atggagctcagagaagcttttgccaaagttg 21649957
Score = 167 bits (84), Expect = 2e-38
Identities = 84/84 (100%)
Strand = Plus / Plus
Query: 936 gtaaaatgatcaacttatcagtgccagacacaattgacgaaagaaccatcaacaagaaga 995
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21656159 gtaaaatgatcaacttatcagtgccagacacaattgacgaaagaaccatcaacaagaaga 21656218
Query: 996 aactcacccctttcaccatccagg 1019
||||||||||||||||||||||||
Sbjct: 21656219 aactcacccctttcaccatccagg 21656242
Score = 93.7 bits (47), Expect = 3e-16
Identities = 47/47 (100%)
Strand = Plus / Plus
Query: 1616 gtgagacgagagaggagcggacgttcagaaactggatgaactccttg 1662
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21669309 gtgagacgagagaggagcggacgttcagaaactggatgaactccttg 21669355
>Sscrofa_Chr13
|| Length = 218635234
Score = 67.9 bits (34), Expect = 2e-08
Identities = 64/74 (86%)
Strand = Plus / Plus
Query: 938 aaaatgatcaacttatcagtgccagacacaattgacgaaagaaccatcaacaagaagaaa 997
||||||||||||||||| | ||||| |||||||| |||||| |||| || ||||| ||
Sbjct: 91168739 aaaatgatcaacttatctgaaccagatacaattgatgaaagagccattaataagaaaaag 91168798
Query: 998 ctcacccctttcac 1011
||||||||||||||
Sbjct: 91168799 ctcacccctttcac 91168812
Score = 63.9 bits (32), Expect = 3e-07
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 818 gccttcgtcaactggataaacaaagccctggaaaatgaccccgactgt 865
||||| || ||||||||||||||||||||||| |||||||| ||||||
Sbjct: 91167233 gcctttgttaactggataaacaaagccctggagaatgaccctgactgt 91167280
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 46,905,023
Number of extensions: 368
Number of successful extensions: 368
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 365
Number of HSP's successfully gapped: 14
Length of query: 1681
Length of database: 2,808,509,378
Length adjustment: 22
Effective length of query: 1659
Effective length of database: 2,808,408,574
Effective search space: 4659149824266
Effective search space used: 4659149824266
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)