Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007298
(1917 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001029579.1| complement component 1, r subcomponent [Bos ... 426 e-138
Alignment gi|XP_002687923.1| PREDICTED: complement component 1, r subcomp... 471 e-133
Alignment gi|XP_584365.5| PREDICTED: complement component 1, r subcompone... 468 e-131
Alignment gi|NP_001070436.1| mannan-binding lectin serine protease 1 [Bos... 431 e-130
Alignment gi|NP_001179001.1| mannan-binding lectin serine protease 2 [Bos... 393 e-109
Alignment gi|NP_001070018.1| complement C1s subcomponent [Bos taurus]. 325 2e-98
Alignment gi|NP_001179084.1| complement C1r subcomponent-like protein [Bo... 286 4e-77
Alignment gi|XP_002694103.1| PREDICTED: mannan-binding lectin serine pept... 286 4e-77
Alignment gi|XP_002687921.1| PREDICTED: complement component 1, r subcomp... 286 4e-77
Alignment gi|NP_001035560.1| haptoglobin precursor [Bos taurus]. 145 8e-41
>ref|NP_001029579.1| complement component 1, r subcomponent [Bos taurus].
Length = 394
Score = 426 bits (1096), Expect(2) = e-138
Identities = 194/239 (81%), Positives = 214/239 (89%)
Frame = +3
Query: 3 NKMLLTFHTDFSNEENGTIMFYKGFLAYYQAVDLDECAFQHNSGEDNAQQPRCQHLCHNY 182
NKMLLTFH+DFSNEENGTIMFYKGFLAYYQAVD+DECA Q NS E++ CQHLCHNY
Sbjct: 110 NKMLLTFHSDFSNEENGTIMFYKGFLAYYQAVDVDECALQLNSVEEDPPAG-CQHLCHNY 168
Query: 183 IGGYFCSCHLGYELQEDGHSCQAECSRELFTEPSGYISSLEYPQPYPPDLRCNYSIRVER 362
+GGYFCSC GYELQ DG SCQAECS ELFTEPSGYISSLEYP+PYPPDLRCNYSIRVER
Sbjct: 169 VGGYFCSCRPGYELQPDGRSCQAECSSELFTEPSGYISSLEYPRPYPPDLRCNYSIRVER 228
Query: 363 GLTIHLKFLEPFEIDDHQQVHCPYDQLQIYASGRNIGEFCGSQRPAPIDTNSNAVDLLFF 542
G T+HL+FLEPFEIDDHQQ+HCPYDQLQ+Y SGRNIGEFCG QRP ID SN+VDLLFF
Sbjct: 229 GHTLHLQFLEPFEIDDHQQIHCPYDQLQVYVSGRNIGEFCGKQRPERIDAQSNSVDLLFF 288
Query: 543 TDESGDSRGWKLHYTTEIIKCPQPKTLDTFTVIQDLQPQYEFRDYFIASCKQGYQLMEG 719
TDESGDSRGWKL+YT+E+IKCPQPKTLD+FT+IQDLQPQY++RDYFIA+CK+ L G
Sbjct: 289 TDESGDSRGWKLYYTSEVIKCPQPKTLDSFTIIQDLQPQYQYRDYFIATCKKATSLWRG 347
Score = 84.3 bits (207), Expect(2) = e-138
Identities = 39/55 (70%), Positives = 42/55 (76%)
Frame = +1
Query: 697 KATSSWRGSRCYCPSQLSARMMARGIAPCPGARSRTVGGPKACPMGTSITSPQRG 861
KATS WRG+R CPSQLSARMMA G PCPGA SRT G P+AC G SIT P+RG
Sbjct: 340 KATSLWRGTRHSCPSQLSARMMAHGTVPCPGAGSRTAGSPEACSTGPSITPPERG 394
>ref|XP_002687923.1| PREDICTED: complement component 1, r subcomponent-like [Bos
taurus].
Length = 978
Score = 471 bits (1213), Expect = e-133
Identities = 217/264 (82%), Positives = 235/264 (89%)
Frame = +3
Query: 3 NKMLLTFHTDFSNEENGTIMFYKGFLAYYQAVDLDECAFQHNSGEDNAQQPRCQHLCHNY 182
NKMLLTFH+DFSNEENGTIMFYKGFLAYYQAVDLDECA Q NS E++ RCQHLCHNY
Sbjct: 118 NKMLLTFHSDFSNEENGTIMFYKGFLAYYQAVDLDECALQLNSVEEDPPA-RCQHLCHNY 176
Query: 183 IGGYFCSCHLGYELQEDGHSCQAECSRELFTEPSGYISSLEYPQPYPPDLRCNYSIRVER 362
+G YFCSC GYELQ DG SCQAECS ELFTEPSGYISSLEYP+PYP DLRCNYSIRVER
Sbjct: 177 VGSYFCSCRPGYELQPDGRSCQAECSSELFTEPSGYISSLEYPRPYPADLRCNYSIRVER 236
Query: 363 GLTIHLKFLEPFEIDDHQQVHCPYDQLQIYASGRNIGEFCGSQRPAPIDTNSNAVDLLFF 542
G T+HL+FLEPFEIDDHQQ+HCPYDQLQIY SGRNIGEFCG QRP IDT SN+VDLLFF
Sbjct: 237 GHTLHLQFLEPFEIDDHQQIHCPYDQLQIYVSGRNIGEFCGKQRPERIDTQSNSVDLLFF 296
Query: 543 TDESGDSRGWKLHYTTEIIKCPQPKTLDTFTVIQDLQPQYEFRDYFIASCKQGYQLMEGK 722
TDESGDSRGWKL YT+E+I CPQPKTLD+ T+IQDLQP Y F+D F A+CK+GYQLMEG
Sbjct: 297 TDESGDSRGWKLCYTSEVITCPQPKTLDSCTIIQDLQPLYHFKDRFTATCKEGYQLMEGN 356
Query: 723 QVLLSFTAVCQDDGTWHRAMPRCK 794
+ LLSFTAVCQDDGTWHRAMPRC+
Sbjct: 357 KALLSFTAVCQDDGTWHRAMPRCR 380
>ref|XP_584365.5| PREDICTED: complement component 1, r subcomponent-like [Bos
taurus].
Length = 648
Score = 468 bits (1203), Expect = e-131
Identities = 215/264 (81%), Positives = 235/264 (89%)
Frame = +3
Query: 3 NKMLLTFHTDFSNEENGTIMFYKGFLAYYQAVDLDECAFQHNSGEDNAQQPRCQHLCHNY 182
NKMLLTFH+DFSNEENGTIMFYKGFLAYYQAVDLDECA Q NS E++ RCQHLCHNY
Sbjct: 154 NKMLLTFHSDFSNEENGTIMFYKGFLAYYQAVDLDECALQLNSVEEDPPA-RCQHLCHNY 212
Query: 183 IGGYFCSCHLGYELQEDGHSCQAECSRELFTEPSGYISSLEYPQPYPPDLRCNYSIRVER 362
+G YFCSC GYELQ DG SCQAECS ELFTEPSGYISSLEYP+PYP DLRCNYSIRVER
Sbjct: 213 VGSYFCSCRPGYELQPDGRSCQAECSSELFTEPSGYISSLEYPRPYPADLRCNYSIRVER 272
Query: 363 GLTIHLKFLEPFEIDDHQQVHCPYDQLQIYASGRNIGEFCGSQRPAPIDTNSNAVDLLFF 542
G T+HL+FLEPFEIDDHQQ+HCPYD+L+IY SGRNIGEFCG QRP IDT SN+VDLLFF
Sbjct: 273 GHTLHLQFLEPFEIDDHQQMHCPYDKLKIYVSGRNIGEFCGKQRPERIDTQSNSVDLLFF 332
Query: 543 TDESGDSRGWKLHYTTEIIKCPQPKTLDTFTVIQDLQPQYEFRDYFIASCKQGYQLMEGK 722
TDESGDSRGWKL YT+E+I CPQPKTLD+ T+IQDLQP Y F+D F A+CK+GYQLMEG
Sbjct: 333 TDESGDSRGWKLCYTSEVITCPQPKTLDSCTIIQDLQPLYHFKDRFTATCKEGYQLMEGN 392
Query: 723 QVLLSFTAVCQDDGTWHRAMPRCK 794
+ LLSFTAVCQDDGTWHRAMPRC+
Sbjct: 393 KALLSFTAVCQDDGTWHRAMPRCR 416
>ref|NP_001070436.1| mannan-binding lectin serine protease 1 [Bos taurus].
Length = 728
Score = 431 bits (1108), Expect(2) = e-130
Identities = 232/573 (40%), Positives = 324/573 (56%), Gaps = 28/573 (4%)
Frame = +3
Query: 9 MLLTFHTDFSNEENGTIMFYKGFLAYYQAVDLDECAFQHNSGEDNAQQPRCQHLCHNYIG 188
M +TF +DFS+EE T GF A+Y AVD+DEC E ++ C H CHNYIG
Sbjct: 114 MSITFRSDFSDEERFT-----GFDAHYVAVDVDECT------EREDEELSCDHYCHNYIG 162
Query: 189 GYFCSCHLGYELQEDGHSCQAECSRELFTEPSGYISSLEYPQPYPPDLRCNYSIRVERGL 368
GY+CSC GY L D +C+ ECS LFT+ +G I+S ++P PYP C Y+I +E G
Sbjct: 163 GYYCSCRFGYILHTDNRTCRVECSDNLFTQRTGVITSPDFPSPYPKSSECLYTIELEEGF 222
Query: 369 TIHLKFLEPFEIDDHQQVHCPYDQLQIYASGRNIGEFCGSQRPAPIDTNSNAVDLLFFTD 548
I L+F + F+I+DH +V CPYD ++I A + +G FCG + P PI+T S+++ +LF +D
Sbjct: 223 MISLQFEDIFDIEDHPEVSCPYDYIKIKAGPKVLGPFCGEKAPEPINTQSHSIQILFRSD 282
Query: 549 ESGDSRGWKLHYTTEIIKCPQPKTLDTFTVIQDLQPQYEFRDYFIASCKQGYQLMEGKQV 728
SG++RGW+L Y +CP+ + I+ LQ Y F+D + C GY++++
Sbjct: 283 NSGENRGWRLSYRATGNECPKLQP-PVHGKIEPLQTTYSFKDQVLIGCDTGYKVLKDNVE 341
Query: 729 LLSFTAVCQDDGTWHRAMPRCKIKDCGRPKSLPNGDFNYITTKGVNTYQARIQYYCREPY 908
+ +F C DGTW +P CKI DCG P L NG + T + TY++ I+Y C+ PY
Sbjct: 342 MDTFQMECLKDGTWSSKIPTCKIADCGAPAELENGVVTFSTRNNLTTYKSEIRYSCQRPY 401
Query: 909 YKMHTGGGSSKSERGAYTCSAQGVWMNELEGETMPRCLPVCGKPVNPVEE-KQRIIGGRK 1085
YKM + G YTCSAQGVWMNE+ G + P CLPVCG+P + +RIIGGR
Sbjct: 402 YKM------LHNTTGVYTCSAQGVWMNEVLGRSQPTCLPVCGQPSRSLPNLVKRIIGGRN 455
Query: 1086 AKPGSFPWQAF---------TNIYGHGGGALLGDRWILTAAHTLKPKEYDEQ----NNAS 1226
A+PG FPWQA N G GALL + WILTAAH L+ + D +
Sbjct: 456 AEPGLFPWQALIVVEDTSRVPNDKWFGSGALLSESWILTAAHVLRSQRRDNTVTPVSKEH 515
Query: 1227 VDVFLGHVNVDEITKLGNHPVRRFIIHPDYRQEDSHSFEGDIALLELENSVTLGPDILPI 1406
V V LG +V + + N R ++HPD+ + S+ DIAL++L V LGP ILP+
Sbjct: 516 VTVHLGLHDVRDKSGAVNSSAARVVLHPDF---NIQSYNHDIALVQLREPVPLGPHILPV 572
Query: 1407 CLPDNDTFYDW-GFMGYVSGFGITE-------------RKLSHDLRYVHLPIAKREMCQS 1544
CLP + +G V+G+GI+ R LS L+YV LP+ C++
Sbjct: 573 CLPPPEPAGPAPHVLGLVAGWGISNPNVTVDEIIGSGTRTLSDVLQYVKLPVVPHAECKT 632
Query: 1545 WLQKKNRNDVFSRNMFCAGSPTLKQDSCQGDSG 1643
+ ++ N + NMFCAG +D+C GDSG
Sbjct: 633 SYESRSGNYSVTENMFCAGYYEGGKDTCLGDSG 665
Score = 55.5 bits (132), Expect(2) = e-130
Identities = 25/54 (46%), Positives = 34/54 (62%), Gaps = 4/54 (7%)
Frame = +1
Query: 1633 GTVEGVFAMKDEKNDQWVAMGIVSWG----IGCGEGYGFYTKVLNYVDWIKKEM 1782
G G F + D+ + +WVA G+VSWG G + YG YTKV NYVDW+ ++M
Sbjct: 662 GDSGGAFVILDDASQRWVAQGLVSWGGPEECGSKQVYGVYTKVSNYVDWVWEQM 715
>ref|NP_001179001.1| mannan-binding lectin serine protease 2 [Bos taurus].
Length = 686
Score = 393 bits (1010), Expect = e-109
Identities = 219/553 (39%), Positives = 310/553 (56%), Gaps = 7/553 (1%)
Frame = +3
Query: 15 LTFHTDFSNEENGTIMFYKGFLAYYQAVDLDECAFQHNSGEDNAQQPRCQHLCHNYIGGY 194
+TF +D+SNE+ T GF A+Y A D+DEC Q GE P C H CHN++GG+
Sbjct: 115 VTFRSDYSNEKPFT-----GFEAFYSAEDIDEC--QVPPGE----APTCDHHCHNHLGGF 163
Query: 195 FCSCHLGYELQEDGHSCQAECSRELFTEPSGYISSLEYPQPYPPDLRCNYSIRVERGLTI 374
+CSC +GY L + +C A CS ++FT SG +SS EYPQPYP C YSI +E G +
Sbjct: 164 YCSCRVGYVLHRNKRTCSALCSDQVFTARSGELSSPEYPQPYPKLSSCTYSIHLEEGFHV 223
Query: 375 HLKFLEPFEIDDHQQVHCPYDQLQIYASGRNIGEFCGSQRPAPIDTNSNAVDLLFFTDES 554
L F+E F+++ H + CPYD L+I G FCG P+ I+T SN V + F TD+S
Sbjct: 224 ILDFVESFDVETHPETLCPYDSLKIRTDKAEYGPFCGKTLPSRIETKSNTVTITFTTDQS 283
Query: 555 GDSRGWKLHYTTEIIKCPQPKTLDTFTVIQDLQPQYEFRDYFIASCKQGYQLMEGKQVLL 734
GD GWK+ Y + CP P I +Q +Y +D+F C+ GY+L++G L
Sbjct: 284 GDHMGWKVRYNSTAEPCPDPLAPPNGR-ISPVQAKYILKDHFSVFCETGYELLQGNLPLK 342
Query: 735 SFTAVCQDDGTWHRAMPRCKIKDCGRPKSLPNGDFNYITTKGVNTYQARIQYYCREPYYK 914
SF AVCQ DG+W R MP C I DCG P LP+G YIT V TY+A ++Y C E +Y
Sbjct: 343 SFAAVCQKDGSWDRPMPVCSIVDCGPPDDLPSGQVEYITGPAVTTYRAVVKYRCNE-FYT 401
Query: 915 MHTGGGSSKSERGAYTCSAQGVWMNELEGETMPRCLPVCGKPVNPVEEKQRIIGGRKAKP 1094
M T G Y C A G W + +++P C PVCG E RI GG+ AK
Sbjct: 402 MTTNDGK-------YVCEADGFWTSSKREKSLPVCEPVCGISTRTTE--GRIYGGQNAKL 452
Query: 1095 GSFPWQAFTNIYGHGGGALLGDRWILTAAHTLKPKEYDE-QNNASVDVFLGHVN--VDEI 1265
G FPWQ GALL D WILTAAH + YD+ ++ AS+ + +G +
Sbjct: 453 GYFPWQVLLLGKTMAAGALLYDNWILTAAHAV----YDQREDTASLQIRMGALKRISPNY 508
Query: 1266 TKLGNHPVRRFIIHPDYRQEDSHSFEGDIALLELENSVTLGPDILPICLP--DNDTFYDW 1439
T+ + IH Y + ++ DIAL++L+N V + +I+PICLP + ++F
Sbjct: 509 TQAWAEAI---FIHESYIHD--AGYDNDIALIKLKNKVAINSNIMPICLPRKEAESFMRT 563
Query: 1440 GFMGYVSGFGITERK-LSHDLRYVHLPIAKREMCQSWLQKKNRND-VFSRNMFCAGSPTL 1613
+G SG+G+T+R L+ +L+++ +P+ + C + +KK+ + + NM CAG +
Sbjct: 564 NDIGTASGWGLTQRGFLARNLKFIDIPVVDHQKCTAAYEKKSYPEGRVTDNMLCAGLQSG 623
Query: 1614 KQDSCQGDSGRGL 1652
+DSC+GDSG L
Sbjct: 624 GKDSCRGDSGGAL 636
Score = 55.5 bits (132), Expect = 2e-07
Identities = 31/86 (36%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Frame = +1
Query: 1525 NERCARAGSRKKIGTMCFRGTCSVLGPQL*SRIPARGTVEGVFAMKDEKNDQWVAMGIVS 1704
+++C A +K G Q + RG G D + +W GIVS
Sbjct: 594 HQKCTAAYEKKSYPEGRVTDNMLCAGLQSGGKDSCRGDSGGALVFLDNETQKWFVGGIVS 653
Query: 1705 WG-IGCGEG--YGFYTKVLNYVDWIK 1773
WG I CGE YG YTKV+NY+ WIK
Sbjct: 654 WGSINCGEADQYGVYTKVINYIPWIK 679
>ref|NP_001070018.1| complement C1s subcomponent [Bos taurus].
Length = 695
Score = 325 bits (834), Expect(2) = 2e-98
Identities = 204/566 (36%), Positives = 294/566 (51%), Gaps = 19/566 (3%)
Frame = +3
Query: 3 NKMLLTFHTDFSNEENGTIMFYKGFLAYYQAVDLDEC-AFQHNSGEDNAQQPRCQHLCHN 179
+K+ + F +DFSNEE T GF AYY A D+DEC AF A P C H C+N
Sbjct: 110 SKLQVIFRSDFSNEERFT-----GFAAYYVAEDIDECTAF--------ADAP-CSHFCNN 155
Query: 180 YIGGYFCSCHLGYELQEDGHSCQAECSRELFTEPSGYISSLEYPQPYPPDLRCNYSIRVE 359
++GGYFCSC Y L ED +C CS +FT +G + S YP PYP RC+Y I++E
Sbjct: 156 FLGGYFCSCPPEYFLHEDKKNCGVNCSGNVFTTMTGEVESPNYPSPYPESSRCDYQIQLE 215
Query: 360 RGLTIHLKF-LEPFEIDD-HQQVHCPYDQLQIYASGRNIGEFCGSQRPAP--IDTNSNAV 527
G + + E F+++ + HCP D L A ++ G +CG+ P P I+T S+A+
Sbjct: 216 EGFRVVVTMRREDFDVEPADSEGHCP-DSLLFVAGDQHFGPYCGNGFPGPLTIETQSSAL 274
Query: 528 DLLFFTDESGDSRGWKLHYTTEIIKCPQPKTLDTFTVIQDLQPQYEFRDYFIASCKQGYQ 707
+++F TD S +GWK Y + I CP+ T ++F + + +Y FRD +C G++
Sbjct: 275 NIIFQTDGSEQRKGWKFRYHGDPIPCPKEVTANSFW--EPERAKYVFRDVVKITCVDGFE 332
Query: 708 LMEGKQVLLSFTAVCQDDGTWHRAMPRCKIKDCGRPKSLPNGDFNYITTKGVNTYQARIQ 887
+++G SF + CQ +G W + RC+ DCG P+ + +G + + + +
Sbjct: 333 VVQGSVGSPSFYSTCQSNGKWSNSKLRCQPVDCGAPEPIQHG---RVEDPESTLFGSITR 389
Query: 888 YYCREPYYKMHTGGGSSKSERGAYTCSAQGVWMNELEGETMPRCLPVCGKPVNPVEEKQR 1067
Y C PYY M G Y CS G W+N++ G P+C+ VCG P P QR
Sbjct: 390 YSCEMPYYSMECEGSE------VYHCSGNGSWVNKVLGIEPPKCIAVCGTPSEPFRSTQR 443
Query: 1068 IIGGRKAKPGSFPWQAFTNIYGHGGGALLGDRWILTAAHTLKPKEYDEQNNASVDVFLGH 1247
I GG AK +FPWQ F + GGAL+ + W+LTAAH + E N+ V +++G
Sbjct: 444 IFGGSIAKIENFPWQVFFS-NPWAGGALIDEYWVLTAAHVV------EGNDIPV-MYVGS 495
Query: 1248 VNV--DEITKLGNHPVRRFIIHPDYRQED----SHSFEGDIALLELENSVTLGPDILPIC 1409
+V +++ R IHP + D +F+ DIAL+ L + V +GP + PIC
Sbjct: 496 SSVVTSQLSNAQMLTAERVFIHPGWEVLDPSITRKNFDNDIALVRLRDPVKMGPKVAPIC 555
Query: 1410 LPDNDTFYD--WGFMGYVSGFGITERKLSH--DLRYVHLPIAKREMCQSWLQKKNRND-- 1571
LP + YD +G +SG+G T K SH LR LP+A C+ D
Sbjct: 556 LPGTSSEYDPPENVLGLISGWGRTNVK-SHVIKLRGAKLPVAPLSKCREMKGVNPGIDIS 614
Query: 1572 --VFSRNMFCAGSPTLKQDSCQGDSG 1643
VF+ NM CAG+ DSC GDSG
Sbjct: 615 SFVFTENMICAGNDK-GVDSCDGDSG 639
Score = 53.9 bits (128), Expect(2) = 2e-98
Identities = 26/54 (48%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Frame = +1
Query: 1633 GTVEGVFAMKDEKNDQ--WVAMGIVSWGIGCGEGYGFYTKVLNYVDWIKKEMEK 1788
G G FA++D K ++ + G+VSWG CG YG YT+V NYVDWI+K M++
Sbjct: 636 GDSGGAFAVQDPKENKPKFYVAGLVSWGPQCGT-YGIYTRVKNYVDWIRKTMQE 688
Score = 53.5 bits (127), Expect = 6e-07
Identities = 47/172 (27%), Positives = 73/172 (42%), Gaps = 19/172 (11%)
Frame = +3
Query: 267 LFTEPSGY--ISSLEYPQPYPPDLRCNYSIRVERGLTIHLKFLEPFEIDDHQQVHCPYDQ 440
++ EP+ Y I S YPQ YP ++ ++ I V G IHL F +D +C YD
Sbjct: 19 VYAEPTMYGEILSPNYPQVYPNEVEKSWDIEVPAGYGIHLYFT---HLDIELSENCSYDS 75
Query: 441 LQIYASGRNIGEFCGSQRPAPIDTNSNA------------VDLLFFTDESGDSR--GWKL 578
+QI + G G+ CG + + NSN+ + ++F +D S + R G+
Sbjct: 76 VQIMSGGHEEGKLCGRR----TNKNSNSPVVKEFHIPYSKLQVIFRSDFSNEERFTGFAA 131
Query: 579 HYTTEIIKCPQPKTLDTFTVIQDLQPQY---EFRDYFIASCKQGYQLMEGKQ 725
+Y E +D T D + F + SC Y L E K+
Sbjct: 132 YYVAE--------DIDECTAFADAPCSHFCNNFLGGYFCSCPPEYFLHEDKK 175
>ref|NP_001179084.1| complement C1r subcomponent-like protein [Bos taurus].
Length = 514
Score = 286 bits (732), Expect = 4e-77
Identities = 147/315 (46%), Positives = 195/315 (61%), Gaps = 6/315 (1%)
Frame = +3
Query: 717 GKQVLLSFTAVCQDDGT--WHR---AMPRCKIKDCGRPKSLPNGDFNYITTKGVNTYQAR 881
G + L+F+A +D T +H+ A+ + + +P + G I T G N +
Sbjct: 138 GNSLRLTFSAPASEDKTPGFHKGFLALYQAVAVNYTQPINQATGGPKAIPTPGDNPTE-- 195
Query: 882 IQYYCREPYYKMHTGGGSSKSERGAYTCSAQGVWMNELEGETMPRCLPVCGKPVNPVEEK 1061
IQ C+EPYY+ G TC+AQ W + E PRC+PVCG+PV P+ +
Sbjct: 196 IQSCCQEPYYEAKPSG--------TLTCTAQVPWKQTQKREEAPRCVPVCGRPVVPISQT 247
Query: 1062 QRIIGGRKAKPGSFPWQAFTNIYGHGGGALLGDRWILTAAHTLKPKEYDEQN-NASVDVF 1238
+ +G +A+ GSFPWQA T+IYG GGGALLGDRW+LTAAHT+ PK+ N S VF
Sbjct: 248 RESLGASRAELGSFPWQALTSIYGRGGGALLGDRWVLTAAHTIYPKDSILLGRNRSAQVF 307
Query: 1239 LGHVNVDEITKLGNHPVRRFIIHPDYRQEDSHSFEGDIALLELENSVTLGPDILPICLPD 1418
LGH + D++ +LG HPVRR ++HPDY QE+ H F GDIALLELE SV LGP +LP+CLPD
Sbjct: 308 LGHTDTDQMLELGRHPVRRVVVHPDYHQEEPHDFHGDIALLELERSVPLGPHLLPVCLPD 367
Query: 1419 NDTFYDWGFMGYVSGFGITERKLSHDLRYVHLPIAKREMCQSWLQKKNRNDVFSRNMFCA 1598
+ Y G GYVSGFG+ LS L+Y LP+A R C++WL+++ R + F+ MFCA
Sbjct: 368 REALYRPGRWGYVSGFGVEMDWLSTKLKYSRLPVAPRAACEAWLRERQRPEAFTDGMFCA 427
Query: 1599 GSPTLKQDSCQGDSG 1643
G T Q CQGDSG
Sbjct: 428 GDQTRPQSVCQGDSG 442
Score = 79.0 bits (193), Expect = 1e-14
Identities = 35/61 (57%), Positives = 43/61 (70%)
Frame = +1
Query: 1600 GPQL*SRIPARGTVEGVFAMKDEKNDQWVAMGIVSWGIGCGEGYGFYTKVLNYVDWIKKE 1779
G Q + +G G F + D++ +WVA GIVSWGIGCGEGYGFYTKVL+YVDWI+
Sbjct: 428 GDQTRPQSVCQGDSGGAFVVWDDRTQRWVATGIVSWGIGCGEGYGFYTKVLDYVDWIRGV 487
Query: 1780 M 1782
M
Sbjct: 488 M 488
>ref|XP_002694103.1| PREDICTED: mannan-binding lectin serine peptidase 2 [Bos taurus].
Length = 441
Score = 286 bits (732), Expect = 4e-77
Identities = 144/337 (42%), Positives = 192/337 (56%)
Frame = +3
Query: 15 LTFHTDFSNEENGTIMFYKGFLAYYQAVDLDECAFQHNSGEDNAQQPRCQHLCHNYIGGY 194
+TF +D+SNE+ T GF A+Y A D+DEC Q GE P C H CHN++GG+
Sbjct: 115 VTFRSDYSNEKPFT-----GFEAFYSAEDIDEC--QVPPGE----APTCDHHCHNHLGGF 163
Query: 195 FCSCHLGYELQEDGHSCQAECSRELFTEPSGYISSLEYPQPYPPDLRCNYSIRVERGLTI 374
+CSC +GY L + +C A CS ++FT SG +SS EYPQPYP C YSI +E G +
Sbjct: 164 YCSCRVGYVLHRNKRTCSALCSDQVFTARSGELSSPEYPQPYPKLSSCTYSIHLEEGFHV 223
Query: 375 HLKFLEPFEIDDHQQVHCPYDQLQIYASGRNIGEFCGSQRPAPIDTNSNAVDLLFFTDES 554
L F+E F+++ H + CPYD L+I G FCG P+ I+T SN V + F TD+S
Sbjct: 224 ILDFVESFDVETHPETLCPYDSLKIRTDKAEYGPFCGKTLPSRIETKSNTVTITFTTDQS 283
Query: 555 GDSRGWKLHYTTEIIKCPQPKTLDTFTVIQDLQPQYEFRDYFIASCKQGYQLMEGKQVLL 734
GD GWK+ Y + CP P I +Q +Y +D+F C+ GY+L++G L
Sbjct: 284 GDHMGWKVRYNSTAEPCPDPLAPPNGR-ISPVQAKYILKDHFSVFCETGYELLQGNLPLK 342
Query: 735 SFTAVCQDDGTWHRAMPRCKIKDCGRPKSLPNGDFNYITTKGVNTYQARIQYYCREPYYK 914
SF AVCQ DG+W R MP C I DCG P LP+G YIT V TY+A ++Y C E +Y
Sbjct: 343 SFAAVCQKDGSWDRPMPVCSIVDCGPPDDLPSGQVEYITGPAVTTYRAVVKYRCNE-FYT 401
Query: 915 MHTGGGSSKSERGAYTCSAQGVWMNELEGETMPRCLP 1025
M T G Y C A G W + +++P C P
Sbjct: 402 MTTNDGK-------YVCEADGFWTSSKREKSLPVCEP 431
>ref|XP_002687921.1| PREDICTED: complement component 1, r subcomponent-like [Bos taurus].
Length = 492
Score = 286 bits (732), Expect = 4e-77
Identities = 147/315 (46%), Positives = 195/315 (61%), Gaps = 6/315 (1%)
Frame = +3
Query: 717 GKQVLLSFTAVCQDDGT--WHR---AMPRCKIKDCGRPKSLPNGDFNYITTKGVNTYQAR 881
G + L+F+A +D T +H+ A+ + + +P + G I T G N +
Sbjct: 138 GNSLRLTFSAPASEDKTPGFHKGFLALYQAVAVNYTQPINQATGGPKAIPTPGDNPTE-- 195
Query: 882 IQYYCREPYYKMHTGGGSSKSERGAYTCSAQGVWMNELEGETMPRCLPVCGKPVNPVEEK 1061
IQ C+EPYY+ G TC+AQ W + E PRC+PVCG+PV P+ +
Sbjct: 196 IQSCCQEPYYEAKPSG--------TLTCTAQVPWKQTQKREEAPRCVPVCGRPVVPISQT 247
Query: 1062 QRIIGGRKAKPGSFPWQAFTNIYGHGGGALLGDRWILTAAHTLKPKEYDEQN-NASVDVF 1238
+ +G +A+ GSFPWQA T+IYG GGGALLGDRW+LTAAHT+ PK+ N S VF
Sbjct: 248 RESLGASRAELGSFPWQALTSIYGRGGGALLGDRWVLTAAHTIYPKDSILLGRNRSAQVF 307
Query: 1239 LGHVNVDEITKLGNHPVRRFIIHPDYRQEDSHSFEGDIALLELENSVTLGPDILPICLPD 1418
LGH + D++ +LG HPVRR ++HPDY QE+ H F GDIALLELE SV LGP +LP+CLPD
Sbjct: 308 LGHTDTDQMLELGRHPVRRVVVHPDYHQEEPHDFHGDIALLELERSVPLGPHLLPVCLPD 367
Query: 1419 NDTFYDWGFMGYVSGFGITERKLSHDLRYVHLPIAKREMCQSWLQKKNRNDVFSRNMFCA 1598
+ Y G GYVSGFG+ LS L+Y LP+A R C++WL+++ R + F+ MFCA
Sbjct: 368 REALYRPGRWGYVSGFGVEMDWLSTKLKYSRLPVAPRAACEAWLRERQRPEAFTDGMFCA 427
Query: 1599 GSPTLKQDSCQGDSG 1643
G T Q CQGDSG
Sbjct: 428 GDQTRPQSVCQGDSG 442
Score = 79.0 bits (193), Expect = 1e-14
Identities = 35/61 (57%), Positives = 43/61 (70%)
Frame = +1
Query: 1600 GPQL*SRIPARGTVEGVFAMKDEKNDQWVAMGIVSWGIGCGEGYGFYTKVLNYVDWIKKE 1779
G Q + +G G F + D++ +WVA GIVSWGIGCGEGYGFYTKVL+YVDWI+
Sbjct: 428 GDQTRPQSVCQGDSGGAFVVWDDRTQRWVATGIVSWGIGCGEGYGFYTKVLDYVDWIRGV 487
Query: 1780 M 1782
M
Sbjct: 488 M 488
>ref|NP_001035560.1| haptoglobin precursor [Bos taurus].
Length = 401
Score = 145 bits (365), Expect(2) = 8e-41
Identities = 95/306 (31%), Positives = 150/306 (49%), Gaps = 18/306 (5%)
Frame = +3
Query: 780 MPRCKIKD-CGRPKSLPNGDFNYITTKGVNTYQARIQYYCREPYYKMHTGGGSSKSERGA 956
+P C+ D C P + NG Y+ ++Y C+ PYY + T G G
Sbjct: 78 LPECEEDDSCPEPPKIENGYVEYL-----------VRYQCK-PYYTLRTCGD------GV 119
Query: 957 YTCSAQGVWMNELEGETMPRCLPVCGKPVNPVEEKQRIIGGRKAKPGSFPWQAFTNIYGH 1136
YT +++ W+N+ G+ +P C VCGKP +PV++ QRIIGG GSFPWQA + H
Sbjct: 120 YTFNSKKQWINKNIGQKLPECEAVCGKPKHPVDQVQRIIGGSLDAKGSFPWQA-KMVSQH 178
Query: 1137 ---GGGALLGDRWILTAAHTLKPKEYDEQNNASVDVFLG-HVNVDEITKLGNHPVRRFII 1304
G L+ +RW+LT A L ++ + L +V +++ + V + ++
Sbjct: 179 NLISGATLINERWLLTTAKNLYLGHSSDKKAKDITPTLRLYVGKNQLVE-----VEKVVL 233
Query: 1305 HPDYRQEDSHSFEGDIALLELENSVTLGPDILPICLPDNDTFYDWGFMGYVSGFGITER- 1481
HPD+ + DI L++L V + ++PICLP D + G +GYVSG+G E
Sbjct: 234 HPDHSKV-------DIGLIKLRQKVPVNDKVMPICLPSKD-YVKVGRVGYVSGWGRNENF 285
Query: 1482 KLSHDLRYVHLPIAKREMCQSWLQ----KKNR--------NDVFSRNMFCAGSPTLKQDS 1625
+ L+YV LP+A ++ C + KN+ + + N FC G + D+
Sbjct: 286 NFTEHLKYVMLPVADQDKCVKHYEGVDAPKNKTAKSPVGVQPILNENTFCVGLSKYQDDT 345
Query: 1626 CQGDSG 1643
C GD+G
Sbjct: 346 CYGDAG 351
Score = 42.4 bits (98), Expect(2) = 8e-41
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +1
Query: 1633 GTVEGVFAMKDEKNDQWVAMGIVSWGIGCGEG-YGFYTKVLNYVDWIKK 1776
G F + D+++D W A GI+S+ C YG Y KV + +DW++K
Sbjct: 348 GDAGSAFVVHDKEDDTWYAAGILSFDKSCAVAEYGVYVKVTSILDWVRK 396
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 75,465,988
Number of extensions: 2238406
Number of successful extensions: 10099
Number of sequences better than 1.0e-05: 214
Number of HSP's gapped: 9401
Number of HSP's successfully gapped: 450
Length of query: 639
Length of database: 17,681,374
Length adjustment: 109
Effective length of query: 530
Effective length of database: 14,074,782
Effective search space: 7459634460
Effective search space used: 7459634460
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007298
(1917 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_534901.2| PREDICTED: similar to Complement C1r subcompone... 991 0.0
Alignment gi|XP_867183.1| PREDICTED: similar to Complement C1r subcompone... 779 0.0
Alignment gi|XP_850273.1| PREDICTED: similar to mannan-binding lectin ser... 435 e-131
Alignment gi|XP_545245.2| PREDICTED: similar to mannan-binding lectin ser... 435 e-131
Alignment gi|XP_861032.1| PREDICTED: similar to mannan-binding lectin ser... 399 e-116
Alignment gi|XP_867216.1| PREDICTED: similar to Complement C1s subcompone... 352 e-105
Alignment gi|XP_543841.2| PREDICTED: similar to Complement C1s subcompone... 352 e-105
Alignment gi|XP_853320.1| PREDICTED: similar to Complement C1s subcompone... 352 e-105
Alignment gi|XP_543840.2| PREDICTED: similar to complement component 1, r... 290 4e-78
Alignment gi|XP_867158.1| PREDICTED: similar to complement component 1, r... 286 4e-77
>ref|XP_534901.2| PREDICTED: similar to Complement C1r subcomponent precursor
(Complement component 1, r subcomponent) isoform 1 [Canis
familiaris].
Length = 705
Score = 991 bits (2562), Expect(2) = 0.0
Identities = 451/547 (82%), Positives = 503/547 (91%)
Frame = +3
Query: 3 NKMLLTFHTDFSNEENGTIMFYKGFLAYYQAVDLDECAFQHNSGEDNAQQPRCQHLCHNY 182
NKM LTFHTDFSNEENGTIMF+KGFLAYYQAVDLDECA Q NS E+N Q P+CQHLCHNY
Sbjct: 110 NKMQLTFHTDFSNEENGTIMFHKGFLAYYQAVDLDECASQLNSLEENLQ-PQCQHLCHNY 168
Query: 183 IGGYFCSCHLGYELQEDGHSCQAECSRELFTEPSGYISSLEYPQPYPPDLRCNYSIRVER 362
+G YFC+C GYELQ+DGHSCQAECS ELFTEPSGY+SSLEYPQPYPPDLRCNYSIRVER
Sbjct: 169 VGSYFCTCRPGYELQKDGHSCQAECSNELFTEPSGYVSSLEYPQPYPPDLRCNYSIRVER 228
Query: 363 GLTIHLKFLEPFEIDDHQQVHCPYDQLQIYASGRNIGEFCGSQRPAPIDTNSNAVDLLFF 542
GLT+HLKFLEPFEIDDHQQVHCPYDQLQIYA+GRNIGEFCG +RP DT+SNAVDLLFF
Sbjct: 229 GLTLHLKFLEPFEIDDHQQVHCPYDQLQIYANGRNIGEFCGKKRPTDFDTSSNAVDLLFF 288
Query: 543 TDESGDSRGWKLHYTTEIIKCPQPKTLDTFTVIQDLQPQYEFRDYFIASCKQGYQLMEGK 722
TDESGDSRGWKLHY TE+IKCPQPKTLD FT+IQD+QPQY+FRDYFIA+C+QGYQL+EG
Sbjct: 289 TDESGDSRGWKLHYVTEVIKCPQPKTLDKFTIIQDVQPQYQFRDYFIATCQQGYQLVEGN 348
Query: 723 QVLLSFTAVCQDDGTWHRAMPRCKIKDCGRPKSLPNGDFNYITTKGVNTYQARIQYYCRE 902
QVLLSFTAVCQDDGTWHRAMPRC+IKDCG P+SL NG FNY TTKGVNTYQARIQYYC+E
Sbjct: 349 QVLLSFTAVCQDDGTWHRAMPRCRIKDCGPPRSLTNGAFNYTTTKGVNTYQARIQYYCQE 408
Query: 903 PYYKMHTGGGSSKSERGAYTCSAQGVWMNELEGETMPRCLPVCGKPVNPVEEKQRIIGGR 1082
PYYKMHT GG S+ +RGAYTC+AQG+W NE EGE +PRCLPVCGKPVNPVE+KQRIIGG+
Sbjct: 409 PYYKMHTRGGISEIQRGAYTCTAQGIWKNEWEGEKIPRCLPVCGKPVNPVEQKQRIIGGQ 468
Query: 1083 KAKPGSFPWQAFTNIYGHGGGALLGDRWILTAAHTLKPKEYDEQNNASVDVFLGHVNVDE 1262
KAK G+FPWQAFTNIYG GGGALLGDRWILTAAHTL PK++D Q+NA+VDVFLGHV+V+E
Sbjct: 469 KAKLGNFPWQAFTNIYGRGGGALLGDRWILTAAHTLYPKDHDAQSNATVDVFLGHVSVEE 528
Query: 1263 ITKLGNHPVRRFIIHPDYRQEDSHSFEGDIALLELENSVTLGPDILPICLPDNDTFYDWG 1442
ITKL NHPVRR IHPDYRQ++SH+FEGDIALLELENSVTLGP++LPICLPDN+TFYD G
Sbjct: 529 ITKLANHPVRRVSIHPDYRQDESHNFEGDIALLELENSVTLGPNLLPICLPDNETFYDRG 588
Query: 1443 FMGYVSGFGITERKLSHDLRYVHLPIAKREMCQSWLQKKNRNDVFSRNMFCAGSPTLKQD 1622
MGYVSGFGI E +LS+DL+++ LP+AKRE C+SWL+K R DVFS+NMFCAG P+LKQD
Sbjct: 589 LMGYVSGFGIMEERLSYDLKFIRLPVAKREACESWLRKNKRKDVFSQNMFCAGDPSLKQD 648
Query: 1623 SCQGDSG 1643
+CQGDSG
Sbjct: 649 ACQGDSG 655
Score = 94.0 bits (232), Expect(2) = 0.0
Identities = 41/55 (74%), Positives = 46/55 (83%)
Frame = +1
Query: 1630 RGTVEGVFAMKDEKNDQWVAMGIVSWGIGCGEGYGFYTKVLNYVDWIKKEMEKAG 1794
+G GVFA+KDE +D+WVA GIVSWGIGC GYGFYTK+LNYVDWIKKEME G
Sbjct: 651 QGDSGGVFAVKDENSDRWVATGIVSWGIGCSRGYGFYTKLLNYVDWIKKEMEGEG 705
Score = 52.4 bits (124), Expect = 2e-06
Identities = 46/172 (26%), Positives = 78/172 (45%), Gaps = 19/172 (11%)
Frame = +3
Query: 258 SRELFTEPSGYISSLEYPQPYPPDLRCNYSIRVERGLTIHLKFLEPFEIDDHQQVHCPYD 437
S++LF G ++S YP+PYP +L I V G + L F ++ D C YD
Sbjct: 22 SQKLF----GEVTSPLYPKPYPNNLDKTTVITVPTGFRVKLVF---WQFDLEPSEGCLYD 74
Query: 438 QLQIYASGRNIGEFCGSQRPAPID---------TNSNAVDLLFFTDESGDSRGWKLHYTT 590
++I A + +G FCG Q +P+ + N + L F TD S + G + +
Sbjct: 75 YVKISADKKTLGRFCG-QLGSPLGNPPEAREFVSQGNKMQLTFHTDFSNEENG-TIMFHK 132
Query: 591 EIIKCPQPKTLDTF-----TVIQDLQPQ-----YEFRDYFIASCKQGYQLME 716
+ Q LD ++ ++LQPQ + + + +C+ GY+L +
Sbjct: 133 GFLAYYQAVDLDECASQLNSLEENLQPQCQHLCHNYVGSYFCTCRPGYELQK 184
>ref|XP_867183.1| PREDICTED: similar to Complement C1r subcomponent precursor
(Complement component 1, r subcomponent) isoform 2 [Canis
familiaris].
Length = 628
Score = 779 bits (2012), Expect(2) = 0.0
Identities = 377/548 (68%), Positives = 428/548 (78%), Gaps = 1/548 (0%)
Frame = +3
Query: 3 NKMLLTFHTDFSNEENGTIMFYKGFLAYYQAVDLDECAFQHNSGEDNAQQPRCQHLCHNY 182
NKM LTFHTDFSNEENGTIMF+KGFLAYYQAVDLD
Sbjct: 110 NKMQLTFHTDFSNEENGTIMFHKGFLAYYQAVDLD------------------------- 144
Query: 183 IGGYFCSCHLGYELQEDGHSCQAECSRELFTEPSGYISSLEYP-QPYPPDLRCNYSIRVE 359
EC+ +L +SLE QP +C + IRVE
Sbjct: 145 -----------------------ECASQL--------NSLEENLQP-----QCQHLIRVE 168
Query: 360 RGLTIHLKFLEPFEIDDHQQVHCPYDQLQIYASGRNIGEFCGSQRPAPIDTNSNAVDLLF 539
RGLT+HLKFLEPFEIDDHQQVHCPYDQLQIYA+GRNIGEFCG +RP DT+
Sbjct: 169 RGLTLHLKFLEPFEIDDHQQVHCPYDQLQIYANGRNIGEFCGKKRPTDFDTS-------- 220
Query: 540 FTDESGDSRGWKLHYTTEIIKCPQPKTLDTFTVIQDLQPQYEFRDYFIASCKQGYQLMEG 719
WKLHY TE+IKCPQPKTLD FT+IQD+QPQY+FRDYFIA+C+QGYQL+EG
Sbjct: 221 ----------WKLHYVTEVIKCPQPKTLDKFTIIQDVQPQYQFRDYFIATCQQGYQLVEG 270
Query: 720 KQVLLSFTAVCQDDGTWHRAMPRCKIKDCGRPKSLPNGDFNYITTKGVNTYQARIQYYCR 899
QVLLSFTAVCQDDGTWHRAMPRC+IKDCG P+SL NG FNY TTKGVNTYQARIQYYC+
Sbjct: 271 NQVLLSFTAVCQDDGTWHRAMPRCRIKDCGPPRSLTNGAFNYTTTKGVNTYQARIQYYCQ 330
Query: 900 EPYYKMHTGGGSSKSERGAYTCSAQGVWMNELEGETMPRCLPVCGKPVNPVEEKQRIIGG 1079
EPYYKMHT GG S+ +RGAYTC+AQG+W NE EGE +PRCLPVCGKPVNPVE+KQRIIGG
Sbjct: 331 EPYYKMHTRGGISEIQRGAYTCTAQGIWKNEWEGEKIPRCLPVCGKPVNPVEQKQRIIGG 390
Query: 1080 RKAKPGSFPWQAFTNIYGHGGGALLGDRWILTAAHTLKPKEYDEQNNASVDVFLGHVNVD 1259
+KAK G+FPWQAFTNIYG GGGALLGDRWILTAAHTL PK++D Q+NA+VDVFLGHV+V+
Sbjct: 391 QKAKLGNFPWQAFTNIYGRGGGALLGDRWILTAAHTLYPKDHDAQSNATVDVFLGHVSVE 450
Query: 1260 EITKLGNHPVRRFIIHPDYRQEDSHSFEGDIALLELENSVTLGPDILPICLPDNDTFYDW 1439
EITKL NHPVRR IHPDYRQ++SH+FEGDIALLELENSVTLGP++LPICLPDN+TFYD
Sbjct: 451 EITKLANHPVRRVSIHPDYRQDESHNFEGDIALLELENSVTLGPNLLPICLPDNETFYDR 510
Query: 1440 GFMGYVSGFGITERKLSHDLRYVHLPIAKREMCQSWLQKKNRNDVFSRNMFCAGSPTLKQ 1619
G MGYVSGFGI E +LS+DL+++ LP+AKRE C+SWL+K R DVFS+NMFCAG P+LKQ
Sbjct: 511 GLMGYVSGFGIMEERLSYDLKFIRLPVAKREACESWLRKNKRKDVFSQNMFCAGDPSLKQ 570
Query: 1620 DSCQGDSG 1643
D+CQGDSG
Sbjct: 571 DACQGDSG 578
Score = 94.0 bits (232), Expect(2) = 0.0
Identities = 41/55 (74%), Positives = 46/55 (83%)
Frame = +1
Query: 1630 RGTVEGVFAMKDEKNDQWVAMGIVSWGIGCGEGYGFYTKVLNYVDWIKKEMEKAG 1794
+G GVFA+KDE +D+WVA GIVSWGIGC GYGFYTK+LNYVDWIKKEME G
Sbjct: 574 QGDSGGVFAVKDENSDRWVATGIVSWGIGCSRGYGFYTKLLNYVDWIKKEMEGEG 628
>ref|XP_850273.1| PREDICTED: similar to mannan-binding lectin serine protease 1 isoform
2 precursor isoform 2 [Canis familiaris].
Length = 728
Score = 435 bits (1118), Expect(2) = e-131
Identities = 230/573 (40%), Positives = 329/573 (57%), Gaps = 28/573 (4%)
Frame = +3
Query: 9 MLLTFHTDFSNEENGTIMFYKGFLAYYQAVDLDECAFQHNSGEDNAQQPRCQHLCHNYIG 188
M +TF +DFSNEE T GF A+Y AVD+DEC E ++ C H CHNYIG
Sbjct: 114 MSITFRSDFSNEERFT-----GFDAHYMAVDVDECT------EREDEELSCDHYCHNYIG 162
Query: 189 GYFCSCHLGYELQEDGHSCQAECSRELFTEPSGYISSLEYPQPYPPDLRCNYSIRVERGL 368
GY+CSC GY L D +C+ ECS ++T+ +G I+S ++P PYP C Y+I +E G
Sbjct: 163 GYYCSCRFGYLLHTDNRTCRVECSDNVYTQRTGVITSPDFPNPYPKSSECFYTIELEEGF 222
Query: 369 TIHLKFLEPFEIDDHQQVHCPYDQLQIYASGRNIGEFCGSQRPAPIDTNSNAVDLLFFTD 548
+ L+F + F+I+DH +V CPYD ++I A + +G FCG + P PI+T S++V +LF +D
Sbjct: 223 MVSLQFEDIFDIEDHPEVPCPYDYIKIKAGPKVLGPFCGEKAPEPINTESHSVQILFRSD 282
Query: 549 ESGDSRGWKLHYTTEIIKCPQPKTLDTFTVIQDLQPQYEFRDYFIASCKQGYQLMEGKQV 728
SG+++GW+L Y +CP P+ L I+ LQ Y F+D + SC GY++++
Sbjct: 283 NSGENQGWRLSYRATGNECPDPE-LPVHGKIEPLQATYSFKDQVLISCDTGYKVLKDNVE 341
Query: 729 LLSFTAVCQDDGTWHRAMPRCKIKDCGRPKSLPNGDFNYITTKGVNTYQARIQYYCREPY 908
+ +F C DGTW +P CKI DCG P L +G + T + TY++ IQY C++PY
Sbjct: 342 MDTFQIECLKDGTWSNRIPTCKIADCGAPAELKHGLITFSTRNNLTTYKSEIQYSCQQPY 401
Query: 909 YKMHTGGGSSKSERGAYTCSAQGVWMNELEGETMPRCLPVCGKPVNPVEE-KQRIIGGRK 1085
YKM + G YTCSAQGVWMNE+ G + P CLPVCG+P + +RIIGGR
Sbjct: 402 YKM------LHNITGVYTCSAQGVWMNEVLGRSQPTCLPVCGQPSRSLPNLVKRIIGGRN 455
Query: 1086 AKPGSFPWQAF---------TNIYGHGGGALLGDRWILTAAHTLKPKEYDEQ----NNAS 1226
A+PG FPWQA N G GALL + WILTAAH L+ + D +
Sbjct: 456 AEPGLFPWQALIVVEDTSRVPNDKWFGSGALLSESWILTAAHVLRSQRRDNTVTPVSKEH 515
Query: 1227 VDVFLGHVNVDEITKLGNHPVRRFIIHPDYRQEDSHSFEGDIALLELENSVTLGPDILPI 1406
V V+LG +V + + N + ++HPD+ + ++ DIAL++L V LGP ++PI
Sbjct: 516 VTVYLGLHDVRDKSGAVNSSAAQVVLHPDF---NIQNYNHDIALVQLREPVPLGPHVMPI 572
Query: 1407 CLPDND-TFYDWGFMGYVSGFGITE-------------RKLSHDLRYVHLPIAKREMCQS 1544
CLP + + +G V+G+GI+ R LS L+YV LP+ C++
Sbjct: 573 CLPSPEPEGPEPHMLGLVAGWGISNPNVTVDEIISSGTRTLSDVLQYVKLPVVPYAECKT 632
Query: 1545 WLQKKNRNDVFSRNMFCAGSPTLKQDSCQGDSG 1643
+ ++ N + NMFCAG +D+C GDSG
Sbjct: 633 SYESRSGNYSVTENMFCAGYYEGGKDTCLGDSG 665
Score = 54.7 bits (130), Expect(2) = e-131
Identities = 25/54 (46%), Positives = 34/54 (62%), Gaps = 4/54 (7%)
Frame = +1
Query: 1633 GTVEGVFAMKDEKNDQWVAMGIVSWG----IGCGEGYGFYTKVLNYVDWIKKEM 1782
G G F + D+ + +WVA G+VSWG G + YG YTKV NYVDW+ ++M
Sbjct: 662 GDSGGAFVILDDLSQRWVAQGLVSWGGPEECGSKQVYGVYTKVSNYVDWLWEQM 715
>ref|XP_545245.2| PREDICTED: similar to mannan-binding lectin serine protease 1 isoform
2 precursor isoform 1 [Canis familiaris].
Length = 697
Score = 435 bits (1118), Expect(2) = e-131
Identities = 230/573 (40%), Positives = 329/573 (57%), Gaps = 28/573 (4%)
Frame = +3
Query: 9 MLLTFHTDFSNEENGTIMFYKGFLAYYQAVDLDECAFQHNSGEDNAQQPRCQHLCHNYIG 188
M +TF +DFSNEE T GF A+Y AVD+DEC E ++ C H CHNYIG
Sbjct: 83 MSITFRSDFSNEERFT-----GFDAHYMAVDVDECT------EREDEELSCDHYCHNYIG 131
Query: 189 GYFCSCHLGYELQEDGHSCQAECSRELFTEPSGYISSLEYPQPYPPDLRCNYSIRVERGL 368
GY+CSC GY L D +C+ ECS ++T+ +G I+S ++P PYP C Y+I +E G
Sbjct: 132 GYYCSCRFGYLLHTDNRTCRVECSDNVYTQRTGVITSPDFPNPYPKSSECFYTIELEEGF 191
Query: 369 TIHLKFLEPFEIDDHQQVHCPYDQLQIYASGRNIGEFCGSQRPAPIDTNSNAVDLLFFTD 548
+ L+F + F+I+DH +V CPYD ++I A + +G FCG + P PI+T S++V +LF +D
Sbjct: 192 MVSLQFEDIFDIEDHPEVPCPYDYIKIKAGPKVLGPFCGEKAPEPINTESHSVQILFRSD 251
Query: 549 ESGDSRGWKLHYTTEIIKCPQPKTLDTFTVIQDLQPQYEFRDYFIASCKQGYQLMEGKQV 728
SG+++GW+L Y +CP P+ L I+ LQ Y F+D + SC GY++++
Sbjct: 252 NSGENQGWRLSYRATGNECPDPE-LPVHGKIEPLQATYSFKDQVLISCDTGYKVLKDNVE 310
Query: 729 LLSFTAVCQDDGTWHRAMPRCKIKDCGRPKSLPNGDFNYITTKGVNTYQARIQYYCREPY 908
+ +F C DGTW +P CKI DCG P L +G + T + TY++ IQY C++PY
Sbjct: 311 MDTFQIECLKDGTWSNRIPTCKIADCGAPAELKHGLITFSTRNNLTTYKSEIQYSCQQPY 370
Query: 909 YKMHTGGGSSKSERGAYTCSAQGVWMNELEGETMPRCLPVCGKPVNPVEE-KQRIIGGRK 1085
YKM + G YTCSAQGVWMNE+ G + P CLPVCG+P + +RIIGGR
Sbjct: 371 YKM------LHNITGVYTCSAQGVWMNEVLGRSQPTCLPVCGQPSRSLPNLVKRIIGGRN 424
Query: 1086 AKPGSFPWQAF---------TNIYGHGGGALLGDRWILTAAHTLKPKEYDEQ----NNAS 1226
A+PG FPWQA N G GALL + WILTAAH L+ + D +
Sbjct: 425 AEPGLFPWQALIVVEDTSRVPNDKWFGSGALLSESWILTAAHVLRSQRRDNTVTPVSKEH 484
Query: 1227 VDVFLGHVNVDEITKLGNHPVRRFIIHPDYRQEDSHSFEGDIALLELENSVTLGPDILPI 1406
V V+LG +V + + N + ++HPD+ + ++ DIAL++L V LGP ++PI
Sbjct: 485 VTVYLGLHDVRDKSGAVNSSAAQVVLHPDF---NIQNYNHDIALVQLREPVPLGPHVMPI 541
Query: 1407 CLPDND-TFYDWGFMGYVSGFGITE-------------RKLSHDLRYVHLPIAKREMCQS 1544
CLP + + +G V+G+GI+ R LS L+YV LP+ C++
Sbjct: 542 CLPSPEPEGPEPHMLGLVAGWGISNPNVTVDEIISSGTRTLSDVLQYVKLPVVPYAECKT 601
Query: 1545 WLQKKNRNDVFSRNMFCAGSPTLKQDSCQGDSG 1643
+ ++ N + NMFCAG +D+C GDSG
Sbjct: 602 SYESRSGNYSVTENMFCAGYYEGGKDTCLGDSG 634
Score = 54.7 bits (130), Expect(2) = e-131
Identities = 25/54 (46%), Positives = 34/54 (62%), Gaps = 4/54 (7%)
Frame = +1
Query: 1633 GTVEGVFAMKDEKNDQWVAMGIVSWG----IGCGEGYGFYTKVLNYVDWIKKEM 1782
G G F + D+ + +WVA G+VSWG G + YG YTKV NYVDW+ ++M
Sbjct: 631 GDSGGAFVILDDLSQRWVAQGLVSWGGPEECGSKQVYGVYTKVSNYVDWLWEQM 684
>ref|XP_861032.1| PREDICTED: similar to mannan-binding lectin serine protease 1 isoform
1 precursor isoform 3 [Canis familiaris].
Length = 699
Score = 399 bits (1026), Expect(2) = e-116
Identities = 223/564 (39%), Positives = 315/564 (55%), Gaps = 19/564 (3%)
Frame = +3
Query: 9 MLLTFHTDFSNEENGTIMFYKGFLAYYQAVDLDECAFQHNSGEDNAQQPRCQHLCHNYIG 188
M +TF +DFSNEE T GF A+Y AVD+DEC E ++ C H CHNYIG
Sbjct: 114 MSITFRSDFSNEERFT-----GFDAHYMAVDVDECT------EREDEELSCDHYCHNYIG 162
Query: 189 GYFCSCHLGYELQEDGHSCQAECSRELFTEPSGYISSLEYPQPYPPDLRCNYSIRVERGL 368
GY+CSC GY L D +C+ ECS ++T+ +G I+S ++P PYP C Y+I +E G
Sbjct: 163 GYYCSCRFGYLLHTDNRTCRVECSDNVYTQRTGVITSPDFPNPYPKSSECFYTIELEEGF 222
Query: 369 TIHLKFLEPFEIDDHQQVHCPYDQLQIYASGRNIGEFCGSQRPAPIDTNSNAVDLLFFTD 548
+ L+F + F+I+DH +V CPYD ++I A + +G FCG + P PI+T S++V +LF +D
Sbjct: 223 MVSLQFEDIFDIEDHPEVPCPYDYIKIKAGPKVLGPFCGEKAPEPINTESHSVQILFRSD 282
Query: 549 ESGDSRGWKLHYTTEIIKCPQPKTLDTFTVIQDLQPQYEFRDYFIASCKQGYQLMEGKQV 728
SG+++GW+L Y +CP P+ L I+ LQ Y F+D + SC GY++++
Sbjct: 283 NSGENQGWRLSYRATGNECPDPE-LPVHGKIEPLQATYSFKDQVLISCDTGYKVLKDNVE 341
Query: 729 LLSFTAVCQDDGTWHRAMPRCKIKDCGRPKSLPNGDFNYITTKGVNTYQARIQYYCREPY 908
+ +F C DGTW +P CKI DCG P L +G + T + TY++ IQY C++PY
Sbjct: 342 MDTFQIECLKDGTWSNRIPTCKIADCGAPAELKHGLITFSTRNNLTTYKSEIQYSCQQPY 401
Query: 909 YKMHTGGGSSKSERGAYTCSAQGVWMNELEGETMPRCLPVCGKPVNPVEEKQRIIGGRKA 1088
YKM + G YTCSAQGVWMNE+ G + P CLPVCG P + RI GR
Sbjct: 402 YKM------LHNITGVYTCSAQGVWMNEVLGRSQPTCLPVCGVPKFSRKLMARIFNGRPV 455
Query: 1089 KPGSFPWQA---FTNIYGHGGGALLGDRWILTAAHTLKPKEYDEQNNASVDVFLGHVNVD 1259
+ G+ PW A + N GG+LLG WI+TAAH L + D + A D L + D
Sbjct: 456 QKGTTPWIAMLSYPNEQPFCGGSLLGSSWIVTAAHCLH-QSLDSEYPALHDSDLLRPS-D 513
Query: 1260 EITKLGNH------------PVRRFIIHPDYRQEDSHSFEGDIALLELENSVTLGPDILP 1403
+G H V+R +HP Y D ++FE D+AL+EL S L ++P
Sbjct: 514 FKVIMGKHWRRRSDGNEQHLRVKRIFLHPLY---DPNTFENDVALVELLESPVLNDFVMP 570
Query: 1404 ICLPDNDTFYDWGFMGYVSGFGIT-ERKLSHDLRYVHLPIAKREMCQ---SWLQKKNRND 1571
ICLP+ + G + VSG+G ++ L + +PI CQ + L+KK
Sbjct: 571 ICLPEEPP--EEGAIVIVSGWGKQFLQRFPETLMEIEIPIVDHHTCQEAYAPLRKK---- 624
Query: 1572 VFSRNMFCAGSPTLKQDSCQGDSG 1643
+R+M CAG +D+C GDSG
Sbjct: 625 -VTRDMICAGEKEGGKDACAGDSG 647
Score = 40.0 bits (92), Expect(2) = e-116
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +1
Query: 1633 GTVEGVFAMKDEKNDQWVAMGIVSWGIGCG--EGYGFYTKVLNYVDWIKK 1776
G G D + QW +G VSWG CG + YG Y+ + + DWI++
Sbjct: 644 GDSGGPMVTLDRERGQWYLVGTVSWGEDCGKKDRYGVYSYIYHNKDWIQR 693
>ref|XP_867216.1| PREDICTED: similar to Complement C1s subcomponent precursor (C1
esterase) isoform 3 [Canis familiaris].
Length = 695
Score = 352 bits (904), Expect(2) = e-105
Identities = 213/564 (37%), Positives = 306/564 (54%), Gaps = 17/564 (3%)
Frame = +3
Query: 3 NKMLLTFHTDFSNEENGTIMFYKGFLAYYQAVDLDECAFQHNSGEDNAQQPRCQHLCHNY 182
N++ + F +DFSNEE T GF AYY AVD++EC D A P C H C+N+
Sbjct: 110 NRLQVIFKSDFSNEERFT-----GFAAYYVAVDINECT-------DFADVP-CSHFCNNF 156
Query: 183 IGGYFCSCHLGYELQEDGHSCQAECSRELFTEPSGYISSLEYPQPYPPDLRCNYSIRVER 362
IGGYFCSC Y L ED +C CS ++FT +G I+S YP PYP + RC+Y I++E
Sbjct: 157 IGGYFCSCPPEYFLHEDMKNCGVNCSGDVFTTLTGEITSPNYPNPYPENSRCDYQIQLED 216
Query: 363 GLTIHLKF-LEPFEIDD-HQQVHCPYDQLQIYASGRNIGEFCGSQRPAP--IDTNSNAVD 530
G + + E F+++ HCP D L A + G +CG P P I+T S+A++
Sbjct: 217 GYQVVVTVRREDFDVESADSNGHCP-DSLVFVAGDKQFGPYCGKGFPGPLNIETKSSALN 275
Query: 531 LLFFTDESGDSRGWKLHYTTEIIKCPQPKTLDTFTVIQDLQPQYEFRDYFIASCKQGYQL 710
++F TD++G +GWKL Y + I C + T + +V + + Y F+D +C +G+++
Sbjct: 276 IIFQTDQTGQKKGWKLRYRGDPIPCSKEVTAN--SVWEPEKAIYVFKDVVKITCLEGFEV 333
Query: 711 MEGKQVLLSFTAVCQDDGTWHRAMPRCKIKDCGRPKSLPNGDFNYITTKGVNTYQARIQY 890
++G SF + CQ +G W + +C+ DCG P+ + NG + + I Y
Sbjct: 334 VQGSVGSSSFYSTCQSNGKWSNSKLKCQPVDCGSPEPIQNGK---AEDPEHTLFGSVIHY 390
Query: 891 YCREPYYKMHTGGGSSKSERGAYTCSAQGVWMNELEGETMPRCLPVCGKPVNPVEEKQRI 1070
C EPYY + E G Y C+ G W+N+L G +P+C+PVCG P P KQRI
Sbjct: 391 TCEEPYYYL------EDEESGEYHCAGNGSWVNKLLGTELPKCVPVCGVPSKPFMGKQRI 444
Query: 1071 IGGRKAKPGSFPWQAFTNIYGHGGGALLGDRWILTAAHTLKPKEYDEQNNASVDVFLGHV 1250
GG A+ +FPWQ F + GGAL+ + W+LTAAH + E+N V +++G
Sbjct: 445 FGGSLAEIQNFPWQVFFS-NPRAGGALIDEYWVLTAAHVV------ERNREPV-MYVGST 496
Query: 1251 NV--DEITKLGNHPVRRFIIHPDYR----QEDSHSFEGDIALLELENSVTLGPDILPICL 1412
+V E+TK R IIHPD+ E +F DIAL++L+ V +GP++ PICL
Sbjct: 497 SVVTSELTKAQMLTAERVIIHPDWEFLDDPETRKNFNNDIALVQLKEPVKMGPNVSPICL 556
Query: 1413 PDNDTFYD--WGFMGYVSGFGITE-RKLSHDLRYVHLPIAKREMCQSWLQKKNRND---- 1571
P + YD G +G +SG+G T+ R LR LPI E C+ K + D
Sbjct: 557 PGTSSEYDPPMGALGLISGWGRTKARDHVIMLRGASLPIVPLEKCREVKGKNVKVDINTY 616
Query: 1572 VFSRNMFCAGSPTLKQDSCQGDSG 1643
VF+ NM CAG DSC+GDSG
Sbjct: 617 VFTNNMICAGGEK-GVDSCEGDSG 639
Score = 49.7 bits (117), Expect(2) = e-105
Identities = 23/54 (42%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Frame = +1
Query: 1633 GTVEGVFAMK--DEKNDQWVAMGIVSWGIGCGEGYGFYTKVLNYVDWIKKEMEK 1788
G G FA++ +E+ ++ G+VSWG CG YG YT+V NY+DWI++ M++
Sbjct: 636 GDSGGAFALRVPNEETLKFYVAGLVSWGPQCGT-YGIYTRVKNYIDWIRQTMQE 688
Score = 49.7 bits (117), Expect = 1e-05
Identities = 39/126 (30%), Positives = 63/126 (50%), Gaps = 13/126 (10%)
Frame = +3
Query: 267 LFTEPSGY--ISSLEYPQPYPPDLRCNYSIRVERGLTIHLKFLEPFEIDDHQQVHCPYDQ 440
++ EP+ Y I S YPQ YP ++ +++I V G IHL F +D +C YD
Sbjct: 19 VYAEPTMYGEILSPNYPQAYPNEIEKSWNIEVPEGYGIHLYFT---HLDIELSENCAYDS 75
Query: 441 LQIYASGRNIGEFCG---SQRP-API----DTNSNAVDLLFFTDESGDSR--GWKLHY-T 587
+QI + G+ CG S+ P +PI N + ++F +D S + R G+ +Y
Sbjct: 76 VQIMSGDFEEGKLCGQKTSKNPNSPIVEEFQIPHNRLQVIFKSDFSNEERFTGFAAYYVA 135
Query: 588 TEIIKC 605
+I +C
Sbjct: 136 VDINEC 141
>ref|XP_543841.2| PREDICTED: similar to Complement C1s subcomponent precursor (C1
esterase) isoform 1 [Canis familiaris].
Length = 695
Score = 352 bits (904), Expect(2) = e-105
Identities = 213/564 (37%), Positives = 306/564 (54%), Gaps = 17/564 (3%)
Frame = +3
Query: 3 NKMLLTFHTDFSNEENGTIMFYKGFLAYYQAVDLDECAFQHNSGEDNAQQPRCQHLCHNY 182
N++ + F +DFSNEE T GF AYY AVD++EC D A P C H C+N+
Sbjct: 110 NRLQVIFKSDFSNEERFT-----GFAAYYVAVDINECT-------DFADVP-CSHFCNNF 156
Query: 183 IGGYFCSCHLGYELQEDGHSCQAECSRELFTEPSGYISSLEYPQPYPPDLRCNYSIRVER 362
IGGYFCSC Y L ED +C CS ++FT +G I+S YP PYP + RC+Y I++E
Sbjct: 157 IGGYFCSCPPEYFLHEDMKNCGVNCSGDVFTTLTGEITSPNYPNPYPENSRCDYQIQLED 216
Query: 363 GLTIHLKF-LEPFEIDD-HQQVHCPYDQLQIYASGRNIGEFCGSQRPAP--IDTNSNAVD 530
G + + E F+++ HCP D L A + G +CG P P I+T S+A++
Sbjct: 217 GYQVVVTVRREDFDVESADSNGHCP-DSLVFVAGDKQFGPYCGKGFPGPLNIETKSSALN 275
Query: 531 LLFFTDESGDSRGWKLHYTTEIIKCPQPKTLDTFTVIQDLQPQYEFRDYFIASCKQGYQL 710
++F TD++G +GWKL Y + I C + T + +V + + Y F+D +C +G+++
Sbjct: 276 IIFQTDQTGQKKGWKLRYRGDPIPCSKEVTAN--SVWEPEKAIYVFKDVVKITCLEGFEV 333
Query: 711 MEGKQVLLSFTAVCQDDGTWHRAMPRCKIKDCGRPKSLPNGDFNYITTKGVNTYQARIQY 890
++G SF + CQ +G W + +C+ DCG P+ + NG + + I Y
Sbjct: 334 VQGSVGSSSFYSTCQSNGKWSNSKLKCQPVDCGSPEPIQNGK---AEDPEHTLFGSVIHY 390
Query: 891 YCREPYYKMHTGGGSSKSERGAYTCSAQGVWMNELEGETMPRCLPVCGKPVNPVEEKQRI 1070
C EPYY + E G Y C+ G W+N+L G +P+C+PVCG P P KQRI
Sbjct: 391 TCEEPYYYL------EDEESGEYHCAGNGSWVNKLLGTELPKCVPVCGVPSKPFMGKQRI 444
Query: 1071 IGGRKAKPGSFPWQAFTNIYGHGGGALLGDRWILTAAHTLKPKEYDEQNNASVDVFLGHV 1250
GG A+ +FPWQ F + GGAL+ + W+LTAAH + E+N V +++G
Sbjct: 445 FGGSLAEIQNFPWQVFFS-NPRAGGALIDEYWVLTAAHVV------ERNREPV-MYVGST 496
Query: 1251 NV--DEITKLGNHPVRRFIIHPDYR----QEDSHSFEGDIALLELENSVTLGPDILPICL 1412
+V E+TK R IIHPD+ E +F DIAL++L+ V +GP++ PICL
Sbjct: 497 SVVTSELTKAQMLTAERVIIHPDWEFLDDPETRKNFNNDIALVQLKEPVKMGPNVSPICL 556
Query: 1413 PDNDTFYD--WGFMGYVSGFGITE-RKLSHDLRYVHLPIAKREMCQSWLQKKNRND---- 1571
P + YD G +G +SG+G T+ R LR LPI E C+ K + D
Sbjct: 557 PGTSSEYDPPMGALGLISGWGRTKARDHVIMLRGASLPIVPLEKCREVKGKNVKVDINTY 616
Query: 1572 VFSRNMFCAGSPTLKQDSCQGDSG 1643
VF+ NM CAG DSC+GDSG
Sbjct: 617 VFTNNMICAGGEK-GVDSCEGDSG 639
Score = 49.7 bits (117), Expect(2) = e-105
Identities = 23/54 (42%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Frame = +1
Query: 1633 GTVEGVFAMK--DEKNDQWVAMGIVSWGIGCGEGYGFYTKVLNYVDWIKKEMEK 1788
G G FA++ +E+ ++ G+VSWG CG YG YT+V NY+DWI++ M++
Sbjct: 636 GDSGGAFALRVPNEETLKFYVAGLVSWGPQCGT-YGIYTRVKNYIDWIRQTMQE 688
Score = 49.7 bits (117), Expect = 1e-05
Identities = 39/126 (30%), Positives = 63/126 (50%), Gaps = 13/126 (10%)
Frame = +3
Query: 267 LFTEPSGY--ISSLEYPQPYPPDLRCNYSIRVERGLTIHLKFLEPFEIDDHQQVHCPYDQ 440
++ EP+ Y I S YPQ YP ++ +++I V G IHL F +D +C YD
Sbjct: 19 VYAEPTMYGEILSPNYPQAYPNEIEKSWNIEVPEGYGIHLYFT---HLDIELSENCAYDS 75
Query: 441 LQIYASGRNIGEFCG---SQRP-API----DTNSNAVDLLFFTDESGDSR--GWKLHY-T 587
+QI + G+ CG S+ P +PI N + ++F +D S + R G+ +Y
Sbjct: 76 VQIMSGDFEEGKLCGQKTSKNPNSPIVEEFQIPHNRLQVIFKSDFSNEERFTGFAAYYVA 135
Query: 588 TEIIKC 605
+I +C
Sbjct: 136 VDINEC 141
>ref|XP_853320.1| PREDICTED: similar to Complement C1s subcomponent precursor (C1
esterase) isoform 2 [Canis familiaris].
Length = 695
Score = 352 bits (904), Expect(2) = e-105
Identities = 213/564 (37%), Positives = 306/564 (54%), Gaps = 17/564 (3%)
Frame = +3
Query: 3 NKMLLTFHTDFSNEENGTIMFYKGFLAYYQAVDLDECAFQHNSGEDNAQQPRCQHLCHNY 182
N++ + F +DFSNEE T GF AYY AVD++EC D A P C H C+N+
Sbjct: 110 NRLQVIFKSDFSNEERFT-----GFAAYYVAVDINECT-------DFADVP-CSHFCNNF 156
Query: 183 IGGYFCSCHLGYELQEDGHSCQAECSRELFTEPSGYISSLEYPQPYPPDLRCNYSIRVER 362
IGGYFCSC Y L ED +C CS ++FT +G I+S YP PYP + RC+Y I++E
Sbjct: 157 IGGYFCSCPPEYFLHEDMKNCGVNCSGDVFTTLTGEITSPNYPNPYPENSRCDYQIQLED 216
Query: 363 GLTIHLKF-LEPFEIDD-HQQVHCPYDQLQIYASGRNIGEFCGSQRPAP--IDTNSNAVD 530
G + + E F+++ HCP D L A + G +CG P P I+T S+A++
Sbjct: 217 GYQVVVTVRREDFDVESADSNGHCP-DSLVFVAGDKQFGPYCGKGFPGPLNIETKSSALN 275
Query: 531 LLFFTDESGDSRGWKLHYTTEIIKCPQPKTLDTFTVIQDLQPQYEFRDYFIASCKQGYQL 710
++F TD++G +GWKL Y + I C + T + +V + + Y F+D +C +G+++
Sbjct: 276 IIFQTDQTGQKKGWKLRYRGDPIPCSKEVTAN--SVWEPEKAIYVFKDVVKITCLEGFEV 333
Query: 711 MEGKQVLLSFTAVCQDDGTWHRAMPRCKIKDCGRPKSLPNGDFNYITTKGVNTYQARIQY 890
++G SF + CQ +G W + +C+ DCG P+ + NG + + I Y
Sbjct: 334 VQGSVGSSSFYSTCQSNGKWSNSKLKCQPVDCGSPEPIQNGK---AEDPEHTLFGSVIHY 390
Query: 891 YCREPYYKMHTGGGSSKSERGAYTCSAQGVWMNELEGETMPRCLPVCGKPVNPVEEKQRI 1070
C EPYY + E G Y C+ G W+N+L G +P+C+PVCG P P KQRI
Sbjct: 391 TCEEPYYYL------EDEESGEYHCAGNGSWVNKLLGTELPKCVPVCGVPSKPFMGKQRI 444
Query: 1071 IGGRKAKPGSFPWQAFTNIYGHGGGALLGDRWILTAAHTLKPKEYDEQNNASVDVFLGHV 1250
GG A+ +FPWQ F + GGAL+ + W+LTAAH + E+N V +++G
Sbjct: 445 FGGSLAEIQNFPWQVFFS-NPRAGGALIDEYWVLTAAHVV------ERNREPV-MYVGST 496
Query: 1251 NV--DEITKLGNHPVRRFIIHPDYR----QEDSHSFEGDIALLELENSVTLGPDILPICL 1412
+V E+TK R IIHPD+ E +F DIAL++L+ V +GP++ PICL
Sbjct: 497 SVVTSELTKAQMLTAERVIIHPDWEFLDDPETRKNFNNDIALVQLKEPVKMGPNVSPICL 556
Query: 1413 PDNDTFYD--WGFMGYVSGFGITE-RKLSHDLRYVHLPIAKREMCQSWLQKKNRND---- 1571
P + YD G +G +SG+G T+ R LR LPI E C+ K + D
Sbjct: 557 PGTSSEYDPPMGALGLISGWGRTKARDHVIMLRGASLPIVPLEKCREVKGKNVKVDINTY 616
Query: 1572 VFSRNMFCAGSPTLKQDSCQGDSG 1643
VF+ NM CAG DSC+GDSG
Sbjct: 617 VFTNNMICAGGEK-GVDSCEGDSG 639
Score = 49.7 bits (117), Expect(2) = e-105
Identities = 23/54 (42%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Frame = +1
Query: 1633 GTVEGVFAMK--DEKNDQWVAMGIVSWGIGCGEGYGFYTKVLNYVDWIKKEMEK 1788
G G FA++ +E+ ++ G+VSWG CG YG YT+V NY+DWI++ M++
Sbjct: 636 GDSGGAFALRVPNEETLKFYVAGLVSWGPQCGT-YGIYTRVKNYIDWIRQTMQE 688
Score = 49.7 bits (117), Expect = 1e-05
Identities = 39/126 (30%), Positives = 63/126 (50%), Gaps = 13/126 (10%)
Frame = +3
Query: 267 LFTEPSGY--ISSLEYPQPYPPDLRCNYSIRVERGLTIHLKFLEPFEIDDHQQVHCPYDQ 440
++ EP+ Y I S YPQ YP ++ +++I V G IHL F +D +C YD
Sbjct: 19 VYAEPTMYGEILSPNYPQAYPNEIEKSWNIEVPEGYGIHLYFT---HLDIELSENCAYDS 75
Query: 441 LQIYASGRNIGEFCG---SQRP-API----DTNSNAVDLLFFTDESGDSR--GWKLHY-T 587
+QI + G+ CG S+ P +PI N + ++F +D S + R G+ +Y
Sbjct: 76 VQIMSGDFEEGKLCGQKTSKNPNSPIVEEFQIPHNRLQVIFKSDFSNEERFTGFAAYYVA 135
Query: 588 TEIIKC 605
+I +C
Sbjct: 136 VDINEC 141
>ref|XP_543840.2| PREDICTED: similar to complement component 1, r subcomponent-like
precursor isoform 1 [Canis familiaris].
Length = 493
Score = 290 bits (741), Expect = 4e-78
Identities = 139/279 (49%), Positives = 182/279 (65%), Gaps = 1/279 (0%)
Frame = +3
Query: 810 RPKSLPNGDFNYITTKGVNTYQARIQYYCREPYYKMHTGGGSSKSERGAYTCSAQGVWMN 989
RP S +G I+T+G + CREPYY+ G C+ Q W
Sbjct: 173 RPISQASGASKAISTRGDPDPLKIQNHCCREPYYQAVPAG--------TLNCTRQNPWKE 224
Query: 990 ELEGETMPRCLPVCGKPVNPVEEKQRIIGGRKAKPGSFPWQAFTNIYGHGGGALLGDRWI 1169
+ + +P C+PVCG+PV P+ + Q G +AK G+FPWQAFT+IYG GGGALLGDRWI
Sbjct: 225 TQDRKELPHCVPVCGRPVAPIAQSQEAAGSSRAKLGNFPWQAFTSIYGRGGGALLGDRWI 284
Query: 1170 LTAAHTLKPKE-YDEQNNASVDVFLGHVNVDEITKLGNHPVRRFIIHPDYRQEDSHSFEG 1346
LTAAHT+ PK+ N SV VFLGH ++DE+ + G+HPVRR ++HPDYRQ +S +F+G
Sbjct: 285 LTAAHTIHPKDGVLLGKNRSVHVFLGHTSIDEMLRRGSHPVRRVVVHPDYRQHESRNFDG 344
Query: 1347 DIALLELENSVTLGPDILPICLPDNDTFYDWGFMGYVSGFGITERKLSHDLRYVHLPIAK 1526
D+ALLEL+ V LGP +LP+CLP+ + Y G GYVSGFG+ L+ +L+Y LP+A
Sbjct: 345 DLALLELQRRVPLGPSLLPVCLPEREALYRSGVWGYVSGFGVDLGWLTTELKYSRLPVAP 404
Query: 1527 REMCQSWLQKKNRNDVFSRNMFCAGSPTLKQDSCQGDSG 1643
R CQ+WLQ K R++VFS NMFCAG +Q CQGDSG
Sbjct: 405 RAACQAWLQDKQRSEVFSANMFCAGDKMRQQSVCQGDSG 443
Score = 80.1 bits (196), Expect = 7e-15
Identities = 35/62 (56%), Positives = 45/62 (72%)
Frame = +1
Query: 1600 GPQL*SRIPARGTVEGVFAMKDEKNDQWVAMGIVSWGIGCGEGYGFYTKVLNYVDWIKKE 1779
G ++ + +G GV+ + DE+ WVA GIVSWGIGCG+GYGFYTKVLNY+DWIK
Sbjct: 429 GDKMRQQSVCQGDSGGVYVVWDERAHHWVATGIVSWGIGCGKGYGFYTKVLNYLDWIKGV 488
Query: 1780 ME 1785
M+
Sbjct: 489 MD 490
>ref|XP_867158.1| PREDICTED: similar to complement component 1, r subcomponent-like
precursor isoform 3 [Canis familiaris].
Length = 489
Score = 286 bits (733), Expect = 4e-77
Identities = 139/278 (50%), Positives = 181/278 (65%), Gaps = 3/278 (1%)
Frame = +3
Query: 819 SLPNGD--FNYITTKGVNTYQARIQYYCREPYYKMHTGGGSSKSERGAYTCSAQGVWMNE 992
S P GD I+T+G + CREPYY+ G C+ Q W
Sbjct: 170 STPMGDGASKAISTRGDPDPLKIQNHCCREPYYQAVPAG--------TLNCTRQNPWKET 221
Query: 993 LEGETMPRCLPVCGKPVNPVEEKQRIIGGRKAKPGSFPWQAFTNIYGHGGGALLGDRWIL 1172
+ + +P C+PVCG+PV P+ + Q G +AK G+FPWQAFT+IYG GGGALLGDRWIL
Sbjct: 222 QDRKELPHCVPVCGRPVAPIAQSQEAAGSSRAKLGNFPWQAFTSIYGRGGGALLGDRWIL 281
Query: 1173 TAAHTLKPKE-YDEQNNASVDVFLGHVNVDEITKLGNHPVRRFIIHPDYRQEDSHSFEGD 1349
TAAHT+ PK+ N SV VFLGH ++DE+ + G+HPVRR ++HPDYRQ +S +F+GD
Sbjct: 282 TAAHTIHPKDGVLLGKNRSVHVFLGHTSIDEMLRRGSHPVRRVVVHPDYRQHESRNFDGD 341
Query: 1350 IALLELENSVTLGPDILPICLPDNDTFYDWGFMGYVSGFGITERKLSHDLRYVHLPIAKR 1529
+ALLEL+ V LGP +LP+CLP+ + Y G GYVSGFG+ L+ +L+Y LP+A R
Sbjct: 342 LALLELQRRVPLGPSLLPVCLPEREALYRSGVWGYVSGFGVDLGWLTTELKYSRLPVAPR 401
Query: 1530 EMCQSWLQKKNRNDVFSRNMFCAGSPTLKQDSCQGDSG 1643
CQ+WLQ K R++VFS NMFCAG +Q CQGDSG
Sbjct: 402 AACQAWLQDKQRSEVFSANMFCAGDKMRQQSVCQGDSG 439
Score = 80.1 bits (196), Expect = 7e-15
Identities = 35/62 (56%), Positives = 45/62 (72%)
Frame = +1
Query: 1600 GPQL*SRIPARGTVEGVFAMKDEKNDQWVAMGIVSWGIGCGEGYGFYTKVLNYVDWIKKE 1779
G ++ + +G GV+ + DE+ WVA GIVSWGIGCG+GYGFYTKVLNY+DWIK
Sbjct: 425 GDKMRQQSVCQGDSGGVYVVWDERAHHWVATGIVSWGIGCGKGYGFYTKVLNYLDWIKGV 484
Query: 1780 ME 1785
M+
Sbjct: 485 MD 486
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 78,657,693
Number of extensions: 2306587
Number of successful extensions: 9902
Number of sequences better than 1.0e-05: 148
Number of HSP's gapped: 9365
Number of HSP's successfully gapped: 289
Length of query: 639
Length of database: 18,874,504
Length adjustment: 109
Effective length of query: 530
Effective length of database: 15,240,880
Effective search space: 8077666400
Effective search space used: 8077666400
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007298
(1917 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001724.3| complement C1r subcomponent precursor [Homo sap... 966 0.0
Alignment gi|NP_624302.1| mannan-binding lectin serine protease 1 isoform... 422 e-127
Alignment gi|NP_006601.2| mannan-binding lectin serine protease 2 isoform... 409 e-123
Alignment gi|NP_001870.3| mannan-binding lectin serine protease 1 isoform... 391 e-113
Alignment gi|NP_001725.1| complement C1s subcomponent precursor [Homo sap... 363 e-109
Alignment gi|NP_958850.1| complement C1s subcomponent precursor [Homo sap... 363 e-109
Alignment gi|NP_057630.2| complement C1r subcomponent-like protein precur... 314 e-100
Alignment gi|NP_001027019.1| mannan-binding lectin serine protease 1 isof... 230 4e-60
Alignment gi|NP_005134.1| haptoglobin isoform 1 preproprotein [Homo sapie... 141 3e-39
Alignment gi|NP_001119574.1| haptoglobin isoform 2 preproprotein [Homo sa... 137 5e-38
>ref|NP_001724.3| complement C1r subcomponent precursor [Homo sapiens].
Length = 705
Score = 966 bits (2498), Expect(2) = 0.0
Identities = 437/547 (79%), Positives = 496/547 (90%)
Frame = +3
Query: 3 NKMLLTFHTDFSNEENGTIMFYKGFLAYYQAVDLDECAFQHNSGEDNAQQPRCQHLCHNY 182
NKMLLTFHTDFSNEENGTIMFYKGFLAYYQAVDLDECA + GE++ Q P+CQHLCHNY
Sbjct: 110 NKMLLTFHTDFSNEENGTIMFYKGFLAYYQAVDLDECASRSKLGEEDPQ-PQCQHLCHNY 168
Query: 183 IGGYFCSCHLGYELQEDGHSCQAECSRELFTEPSGYISSLEYPQPYPPDLRCNYSIRVER 362
+GGYFCSC GYELQED HSCQAECS EL+TE SGYISSLEYP+ YPPDLRCNYSIRVER
Sbjct: 169 VGGYFCSCRPGYELQEDRHSCQAECSSELYTEASGYISSLEYPRSYPPDLRCNYSIRVER 228
Query: 363 GLTIHLKFLEPFEIDDHQQVHCPYDQLQIYASGRNIGEFCGSQRPAPIDTNSNAVDLLFF 542
GLT+HLKFLEPF+IDDHQQVHCPYDQLQIYA+G+NIGEFCG QRP +DT+SNAVDLLFF
Sbjct: 229 GLTLHLKFLEPFDIDDHQQVHCPYDQLQIYANGKNIGEFCGKQRPPDLDTSSNAVDLLFF 288
Query: 543 TDESGDSRGWKLHYTTEIIKCPQPKTLDTFTVIQDLQPQYEFRDYFIASCKQGYQLMEGK 722
TDESGDSRGWKL YTTEIIKCPQPKTLD FT+IQ+LQPQY+FRDYFIA+CKQGYQL+EG
Sbjct: 289 TDESGDSRGWKLRYTTEIIKCPQPKTLDEFTIIQNLQPQYQFRDYFIATCKQGYQLIEGN 348
Query: 723 QVLLSFTAVCQDDGTWHRAMPRCKIKDCGRPKSLPNGDFNYITTKGVNTYQARIQYYCRE 902
QVL SFTAVCQDDGTWHRAMPRCKIKDCG+P++LPNGDF Y TT GVNTY+ARIQYYC E
Sbjct: 349 QVLHSFTAVCQDDGTWHRAMPRCKIKDCGQPRNLPNGDFRYTTTMGVNTYKARIQYYCHE 408
Query: 903 PYYKMHTGGGSSKSERGAYTCSAQGVWMNELEGETMPRCLPVCGKPVNPVEEKQRIIGGR 1082
PYYKM T GS +SE+G YTC+AQG+W NE +GE +PRCLPVCGKPVNPVE++QRIIGG+
Sbjct: 409 PYYKMQTRAGSRESEQGVYTCTAQGIWKNEQKGEKIPRCLPVCGKPVNPVEQRQRIIGGQ 468
Query: 1083 KAKPGSFPWQAFTNIYGHGGGALLGDRWILTAAHTLKPKEYDEQNNASVDVFLGHVNVDE 1262
KAK G+FPWQ FTNI+G GGGALLGDRWILTAAHTL PKE++ Q+NAS+DVFLGH NV+E
Sbjct: 469 KAKMGNFPWQVFTNIHGRGGGALLGDRWILTAAHTLYPKEHEAQSNASLDVFLGHTNVEE 528
Query: 1263 ITKLGNHPVRRFIIHPDYRQEDSHSFEGDIALLELENSVTLGPDILPICLPDNDTFYDWG 1442
+ KLGNHP+RR +HPDYRQ++S++FEGDIALLELENSVTLGP++LPICLPDNDTFYD G
Sbjct: 529 LMKLGNHPIRRVSVHPDYRQDESYNFEGDIALLELENSVTLGPNLLPICLPDNDTFYDLG 588
Query: 1443 FMGYVSGFGITERKLSHDLRYVHLPIAKREMCQSWLQKKNRNDVFSRNMFCAGSPTLKQD 1622
MGYVSGFG+ E K++HDLR+V LP+A + C++WL+ KNR DVFS+NMFCAG P+LKQD
Sbjct: 589 LMGYVSGFGVMEEKIAHDLRFVRLPVANPQACENWLRGKNRMDVFSQNMFCAGHPSLKQD 648
Query: 1623 SCQGDSG 1643
+CQGDSG
Sbjct: 649 ACQGDSG 655
Score = 90.5 bits (223), Expect(2) = 0.0
Identities = 39/53 (73%), Positives = 44/53 (83%)
Frame = +1
Query: 1630 RGTVEGVFAMKDEKNDQWVAMGIVSWGIGCGEGYGFYTKVLNYVDWIKKEMEK 1788
+G GVFA++D D+WVA GIVSWGIGC GYGFYTKVLNYVDWIKKEME+
Sbjct: 651 QGDSGGVFAVRDPNTDRWVATGIVSWGIGCSRGYGFYTKVLNYVDWIKKEMEE 703
Score = 53.5 bits (127), Expect = 7e-07
Identities = 46/182 (25%), Positives = 81/182 (44%), Gaps = 22/182 (12%)
Frame = +3
Query: 243 CQAECSRELFTEPSGYISSLEYPQPYPPDLRCNYSIRVERGLTIHLKFLEPFEIDDHQQV 422
C+A S + + G ++S +P+PYP + I V G + L F + F+++ +
Sbjct: 13 CRAGGSIPIPQKLFGEVTSPLFPKPYPNNFETTTVITVPTGYRVKLVF-QQFDLEPSEG- 70
Query: 423 HCPYDQLQIYASGRNIGEFCGSQRPAPID---------TNSNAVDLLFFTDESGDSRGWK 575
C YD ++I A +++G FCG Q +P+ + N + L F TD S + G
Sbjct: 71 -CFYDYVKISADKKSLGRFCG-QLGSPLGNPPGKKEFMSQGNKMLLTFHTDFSNEENGTI 128
Query: 576 LHY--------TTEIIKCPQPKTLDTFTVIQDLQPQ-----YEFRDYFIASCKQGYQLME 716
+ Y ++ +C L +D QPQ + + + SC+ GY+L E
Sbjct: 129 MFYKGFLAYYQAVDLDECASRSKLGE----EDPQPQCQHLCHNYVGGYFCSCRPGYELQE 184
Query: 717 GK 722
+
Sbjct: 185 DR 186
>ref|NP_624302.1| mannan-binding lectin serine protease 1 isoform 2 precursor [Homo
sapiens].
Length = 728
Score = 422 bits (1086), Expect(2) = e-127
Identities = 227/573 (39%), Positives = 325/573 (56%), Gaps = 28/573 (4%)
Frame = +3
Query: 9 MLLTFHTDFSNEENGTIMFYKGFLAYYQAVDLDECAFQHNSGEDNAQQPRCQHLCHNYIG 188
M +TF +DFSNEE T GF A+Y AVD+DEC E ++ C H CHNYIG
Sbjct: 114 MSITFRSDFSNEERFT-----GFDAHYMAVDVDECK------EREDEELSCDHYCHNYIG 162
Query: 189 GYFCSCHLGYELQEDGHSCQAECSRELFTEPSGYISSLEYPQPYPPDLRCNYSIRVERGL 368
GY+CSC GY L D +C+ ECS LFT+ +G I+S ++P PYP C Y+I +E G
Sbjct: 163 GYYCSCRFGYILHTDNRTCRVECSDNLFTQRTGVITSPDFPNPYPKSSECLYTIELEEGF 222
Query: 369 TIHLKFLEPFEIDDHQQVHCPYDQLQIYASGRNIGEFCGSQRPAPIDTNSNAVDLLFFTD 548
++L+F + F+I+DH +V CPYD ++I + +G FCG + P PI T S++V +LF +D
Sbjct: 223 MVNLQFEDIFDIEDHPEVPCPYDYIKIKVGPKVLGPFCGEKAPEPISTQSHSVLILFHSD 282
Query: 549 ESGDSRGWKLHYTTEIIKCPQPKTLDTFTVIQDLQPQYEFRDYFIASCKQGYQLMEGKQV 728
SG++RGW+L Y +CP+ + I+ Q +Y F+D + SC GY++++
Sbjct: 283 NSGENRGWRLSYRAAGNECPELQP-PVHGKIEPSQAKYFFKDQVLVSCDTGYKVLKDNVE 341
Query: 729 LLSFTAVCQDDGTWHRAMPRCKIKDCGRPKSLPNGDFNYITTKGVNTYQARIQYYCREPY 908
+ +F C DGTW +P CKI DC P L +G + T + TY++ I+Y C+EPY
Sbjct: 342 MDTFQIECLKDGTWSNKIPTCKIVDCRAPGELEHGLITFSTRNNLTTYKSEIKYSCQEPY 401
Query: 909 YKMHTGGGSSKSERGAYTCSAQGVWMNELEGETMPRCLPVCGKPVNPVEE-KQRIIGGRK 1085
YKM + G YTCSAQGVWMN++ G ++P CLP CG+P + +RIIGGR
Sbjct: 402 YKM------LNNNTGIYTCSAQGVWMNKVLGRSLPTCLPECGQPSRSLPSLVKRIIGGRN 455
Query: 1086 AKPGSFPWQAF---------TNIYGHGGGALLGDRWILTAAHTLKPKEYDEQ----NNAS 1226
A+PG FPWQA N G GALL WILTAAH L+ + D +
Sbjct: 456 AEPGLFPWQALIVVEDTSRVPNDKWFGSGALLSASWILTAAHVLRSQRRDTTVIPVSKEH 515
Query: 1227 VDVFLGHVNVDEITKLGNHPVRRFIIHPDYRQEDSHSFEGDIALLELENSVTLGPDILPI 1406
V V+LG +V + + N R ++HPD+ + ++ DIAL++L+ V LGP ++P+
Sbjct: 516 VTVYLGLHDVRDKSGAVNSSAARVVLHPDF---NIQNYNHDIALVQLQEPVPLGPHVMPV 572
Query: 1407 CLPDNDTFYDWGFM-GYVSGFGITE-------------RKLSHDLRYVHLPIAKREMCQS 1544
CLP + M G V+G+GI+ R LS L+YV LP+ C++
Sbjct: 573 CLPRLEPEGPAPHMLGLVAGWGISNPNVTVDEIISSGTRTLSDVLQYVKLPVVPHAECKT 632
Query: 1545 WLQKKNRNDVFSRNMFCAGSPTLKQDSCQGDSG 1643
+ ++ N + NMFCAG +D+C GDSG
Sbjct: 633 SYESRSGNYSVTENMFCAGYYEGGKDTCLGDSG 665
Score = 53.1 bits (126), Expect(2) = e-127
Identities = 24/54 (44%), Positives = 33/54 (61%), Gaps = 4/54 (7%)
Frame = +1
Query: 1633 GTVEGVFAMKDEKNDQWVAMGIVSWG----IGCGEGYGFYTKVLNYVDWIKKEM 1782
G G F + D+ + +WV G+VSWG G + YG YTKV NYVDW+ ++M
Sbjct: 662 GDSGGAFVIFDDLSQRWVVQGLVSWGGPEECGSKQVYGVYTKVSNYVDWVWEQM 715
>ref|NP_006601.2| mannan-binding lectin serine protease 2 isoform 1 preproprotein [Homo
sapiens].
Length = 686
Score = 409 bits (1052), Expect(2) = e-123
Identities = 231/556 (41%), Positives = 316/556 (56%), Gaps = 10/556 (1%)
Frame = +3
Query: 15 LTFHTDFSNEENGTIMFYKGFLAYYQAVDLDECAFQHNSGEDNAQQPRCQHLCHNYIGGY 194
+TF +D+SNE+ T GF A+Y A D+DEC Q GE P C H CHN++GG+
Sbjct: 115 ITFRSDYSNEKPFT-----GFEAFYAAEDIDEC--QVAPGE----APTCDHHCHNHLGGF 163
Query: 195 FCSCHLGYELQEDGHSCQAECSRELFTEPSGYISSLEYPQPYPPDLRCNYSIRVERGLTI 374
+CSC GY L + +C A CS ++FT+ SG +SS EYP+PYP C YSI +E G ++
Sbjct: 164 YCSCRAGYVLHRNKRTCSALCSGQVFTQRSGELSSPEYPRPYPKLSSCTYSISLEEGFSV 223
Query: 375 HLKFLEPFEIDDHQQVHCPYDQLQIYASGRNIGEFCGSQRPAPIDTNSNAVDLLFFTDES 554
L F+E F+++ H + CPYD L+I G FCG P I+T SN V + F TDES
Sbjct: 224 ILDFVESFDVETHPETLCPYDFLKIQTDREEHGPFCGKTLPHRIETKSNTVTITFVTDES 283
Query: 555 GDSRGWKLHYTTEIIKCPQPKTLDTFTVIQDLQPQYEFRDYFIASCKQGYQLMEGKQVLL 734
GD GWK+HYT+ CP P V +Q +Y +D F C+ GY+L++G L
Sbjct: 284 GDHTGWKIHYTSTAQPCPYPMAPPNGHV-SPVQAKYILKDSFSIFCETGYELLQGHLPLK 342
Query: 735 SFTAVCQDDGTWHRAMPRCKIKDCGRPKSLPNGDFNYITTKGVNTYQARIQYYCREPYYK 914
SFTAVCQ DG+W R MP C I DCG P LP+G YIT GV TY+A IQY C E +Y
Sbjct: 343 SFTAVCQKDGSWDRPMPACSIVDCGPPDDLPSGRVEYITGPGVTTYKAVIQYSCEETFYT 402
Query: 915 MHTGGGSSKSERGAYTCSAQGVWMNELEGETMPRCLPVCGKPVNPVEEKQRIIGGRKAKP 1094
M K G Y C A G W + +++P C PVCG ++ RI GG+KAKP
Sbjct: 403 M-------KVNDGKYVCEADGFWTSSKGEKSLPVCEPVCG--LSARTTGGRIYGGQKAKP 453
Query: 1095 GSFPWQAFTNIYGHGGGALLGDRWILTAAHTLKPKEYDEQNNAS-VDVFLGHVNVDEITK 1271
G FPWQ GALL D W+LTAAH + Y+++++AS +D+ +G + +
Sbjct: 454 GDFPWQVLILGGTTAAGALLYDNWVLTAAHAV----YEQKHDASALDIRMG-----TLKR 504
Query: 1272 LGNHPVRRF----IIHPDYRQEDSHSFEGDIALLELENSVTLGPDILPICLP--DNDTFY 1433
L H + + IH Y + F+ DIAL++L N V + +I PICLP + ++F
Sbjct: 505 LSPHYTQAWSEAVFIHEGYTHD--AGFDNDIALIKLNNKVVINSNITPICLPRKEAESFM 562
Query: 1434 DWGFMGYVSGFGITERK-LSHDLRYVHLPIAKREMCQSWLQKK--NRNDVFSRNMFCAGS 1604
+G SG+G+T+R L+ +L YV +PI + C + +K R V + NM CAG
Sbjct: 563 RTDDIGTASGWGLTQRGFLARNLMYVDIPIVDHQKCTAAYEKPPYPRGSV-TANMLCAGL 621
Query: 1605 PTLKQDSCQGDSGRGL 1652
+ +DSC+GDSG L
Sbjct: 622 ESGGKDSCRGDSGGAL 637
Score = 52.4 bits (124), Expect(2) = e-123
Identities = 24/51 (47%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Frame = +1
Query: 1630 RGTVEGVFAMKDEKNDQWVAMGIVSWG-IGCGEG--YGFYTKVLNYVDWIK 1773
RG G D + ++W GIVSWG + CGE YG YTKV+NY+ WI+
Sbjct: 630 RGDSGGALVFLDSETERWFVGGIVSWGSMNCGEAGQYGVYTKVINYIPWIE 680
>ref|NP_001870.3| mannan-binding lectin serine protease 1 isoform 1 precursor [Homo
sapiens].
Length = 699
Score = 391 bits (1005), Expect(2) = e-113
Identities = 218/562 (38%), Positives = 314/562 (55%), Gaps = 17/562 (3%)
Frame = +3
Query: 9 MLLTFHTDFSNEENGTIMFYKGFLAYYQAVDLDECAFQHNSGEDNAQQPRCQHLCHNYIG 188
M +TF +DFSNEE T GF A+Y AVD+DEC E ++ C H CHNYIG
Sbjct: 114 MSITFRSDFSNEERFT-----GFDAHYMAVDVDECK------EREDEELSCDHYCHNYIG 162
Query: 189 GYFCSCHLGYELQEDGHSCQAECSRELFTEPSGYISSLEYPQPYPPDLRCNYSIRVERGL 368
GY+CSC GY L D +C+ ECS LFT+ +G I+S ++P PYP C Y+I +E G
Sbjct: 163 GYYCSCRFGYILHTDNRTCRVECSDNLFTQRTGVITSPDFPNPYPKSSECLYTIELEEGF 222
Query: 369 TIHLKFLEPFEIDDHQQVHCPYDQLQIYASGRNIGEFCGSQRPAPIDTNSNAVDLLFFTD 548
++L+F + F+I+DH +V CPYD ++I + +G FCG + P PI T S++V +LF +D
Sbjct: 223 MVNLQFEDIFDIEDHPEVPCPYDYIKIKVGPKVLGPFCGEKAPEPISTQSHSVLILFHSD 282
Query: 549 ESGDSRGWKLHYTTEIIKCPQPKTLDTFTVIQDLQPQYEFRDYFIASCKQGYQLMEGKQV 728
SG++RGW+L Y +CP+ + I+ Q +Y F+D + SC GY++++
Sbjct: 283 NSGENRGWRLSYRAAGNECPELQP-PVHGKIEPSQAKYFFKDQVLVSCDTGYKVLKDNVE 341
Query: 729 LLSFTAVCQDDGTWHRAMPRCKIKDCGRPKSLPNGDFNYITTKGVNTYQARIQYYCREPY 908
+ +F C DGTW +P CKI DC P L +G + T + TY++ I+Y C+EPY
Sbjct: 342 MDTFQIECLKDGTWSNKIPTCKIVDCRAPGELEHGLITFSTRNNLTTYKSEIKYSCQEPY 401
Query: 909 YKMHTGGGSSKSERGAYTCSAQGVWMNELEGETMPRCLPVCGKPVNPVEEKQRIIGGRKA 1088
YKM + G YTCSAQGVWMN++ G ++P CLPVCG P + RI GR A
Sbjct: 402 YKM------LNNNTGIYTCSAQGVWMNKVLGRSLPTCLPVCGLPKFSRKLMARIFNGRPA 455
Query: 1089 KPGSFPWQA-FTNIYGHG--GGALLGDRWILTAAHTLKP---------KEYDEQNNASVD 1232
+ G+ PW A +++ G GG+LLG WI+TAAH L ++ D + +
Sbjct: 456 QKGTTPWIAMLSHLNGQPFCGGSLLGSSWIVTAAHCLHQSLDPEDPTLRDSDLLSPSDFK 515
Query: 1233 VFLG-HVNVDEITKLGNHPVRRFIIHPDYRQEDSHSFEGDIALLELENSVTLGPDILPIC 1409
+ LG H + + V+ +HP Y D ++FE D+AL+EL S L ++PIC
Sbjct: 516 IILGKHWRLRSDENEQHLGVKHTTLHPQY---DPNTFENDVALVELLESPVLNAFVMPIC 572
Query: 1410 LPDNDTFYDWGFMGYVSGFGIT-ERKLSHDLRYVHLPIAKREMCQ---SWLQKKNRNDVF 1577
LP+ G M VSG+G ++ L + +PI CQ + L+KK
Sbjct: 573 LPEGP--QQEGAMVIVSGWGKQFLQRFPETLMEIEIPIVDHSTCQKAYAPLKKK-----V 625
Query: 1578 SRNMFCAGSPTLKQDSCQGDSG 1643
+R+M CAG +D+C GDSG
Sbjct: 626 TRDMICAGEKEGGKDACAGDSG 647
Score = 37.4 bits (85), Expect(2) = e-113
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +1
Query: 1633 GTVEGVFAMKDEKNDQWVAMGIVSWGIGCG--EGYGFYTKVLNYVDWIKK 1776
G G + + QW +G VSWG CG + YG Y+ + + DWI++
Sbjct: 644 GDSGGPMVTLNRERGQWYLVGTVSWGDDCGKKDRYGVYSYIHHNKDWIQR 693
>ref|NP_001725.1| complement C1s subcomponent precursor [Homo sapiens].
Length = 688
Score = 363 bits (931), Expect(2) = e-109
Identities = 212/563 (37%), Positives = 304/563 (53%), Gaps = 16/563 (2%)
Frame = +3
Query: 3 NKMLLTFHTDFSNEENGTIMFYKGFLAYYQAVDLDECAFQHNSGEDNAQQPRCQHLCHNY 182
NK+ + F +DFSNEE T GF AYY A D++EC D P C H C+N+
Sbjct: 104 NKLQVIFKSDFSNEERFT-----GFAAYYVATDINECT-------DFVDVP-CSHFCNNF 150
Query: 183 IGGYFCSCHLGYELQEDGHSCQAECSRELFTEPSGYISSLEYPQPYPPDLRCNYSIRVER 362
IGGYFCSC Y L +D +C CS ++FT G I+S YP+PYP + RC Y IR+E+
Sbjct: 151 IGGYFCSCPPEYFLHDDMKNCGVNCSGDVFTALIGEIASPNYPKPYPENSRCEYQIRLEK 210
Query: 363 GLTIHLKF-LEPFEIDDHQQVHCPYDQLQIYASGRNIGEFCGSQRPAP--IDTNSNAVDL 533
G + + E F+++ D L A R G +CG P P I+T SNA+D+
Sbjct: 211 GFQVVVTLRREDFDVEAADSAGNCLDSLVFVAGDRQFGPYCGHGFPGPLNIETKSNALDI 270
Query: 534 LFFTDESGDSRGWKLHYTTEIIKCPQPKTLDTFTVIQDLQPQYEFRDYFIASCKQGYQLM 713
+F TD +G +GWKL Y + + CP+ T + +V + + +Y FRD +C G++++
Sbjct: 271 IFQTDLTGQKKGWKLRYHGDPMPCPKEDTPN--SVWEPAKAKYVFRDVVQITCLDGFEVV 328
Query: 714 EGKQVLLSFTAVCQDDGTWHRAMPRCKIKDCGRPKSLPNGDFNYITTKGVNTYQARIQYY 893
EG+ SF + CQ +G W + +C+ DCG P+S+ NG + + + I+Y
Sbjct: 329 EGRVGATSFYSTCQSNGKWSNSKLKCQPVDCGIPESIENGK---VEDPESTLFGSVIRYT 385
Query: 894 CREPYYKMHTGGGSSKSERGAYTCSAQGVWMNELEGETMPRCLPVCGKPVNPVEEKQRII 1073
C EPYY M GGG G Y C+ G W+NE+ G +P+C+PVCG P P EEKQRII
Sbjct: 386 CEEPYYYMENGGG------GEYHCAGNGSWVNEVLGPELPKCVPVCGVPREPFEEKQRII 439
Query: 1074 GGRKAKPGSFPWQAFTNIYGHGGGALLGDRWILTAAHTLKPKEYDEQNNASVDVFLGHVN 1253
GG A +FPWQ F + GGAL+ + W+LTAAH + + N +++G +
Sbjct: 440 GGSDADIKNFPWQVFFD-NPWAGGALINEYWVLTAAHVV-------EGNREPTMYVGSTS 491
Query: 1254 V--DEITKLGNHPVRRFIIHPDYR----QEDSHSFEGDIALLELENSVTLGPDILPICLP 1415
V + K IHP ++ E +F+ DIAL+ L++ V +GP + PICLP
Sbjct: 492 VQTSRLAKSKMLTPEHVFIHPGWKLLEVPEGRTNFDNDIALVRLKDPVKMGPTVSPICLP 551
Query: 1416 DNDTFYDW--GFMGYVSGFGITE-RKLSHDLRYVHLPIAKREMCQSWLQKKNRND----V 1574
+ Y+ G +G +SG+G TE R + L+ LP+A C+ +K D V
Sbjct: 552 GTSSDYNLMDGDLGLISGWGRTEKRDRAVRLKAARLPVAPLRKCKEVKVEKPTADAEAYV 611
Query: 1575 FSRNMFCAGSPTLKQDSCQGDSG 1643
F+ NM CAG DSC+GDSG
Sbjct: 612 FTPNMICAGGEK-GMDSCKGDSG 633
Score = 53.1 bits (126), Expect(2) = e-109
Identities = 26/54 (48%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Frame = +1
Query: 1630 RGTVEGVFAMKDEKND-QWVAMGIVSWGIGCGEGYGFYTKVLNYVDWIKKEMEK 1788
+G G FA++D + ++ A G+VSWG CG YG YT+V NYVDWI K M++
Sbjct: 629 KGDSGGAFAVQDPNDKTKFYAAGLVSWGPQCGT-YGLYTRVKNYVDWIMKTMQE 681
Score = 51.2 bits (121), Expect = 3e-06
Identities = 40/126 (31%), Positives = 61/126 (48%), Gaps = 13/126 (10%)
Frame = +3
Query: 267 LFTEPSGY--ISSLEYPQPYPPDLRCNYSIRVERGLTIHLKFLEPFEIDDHQQVHCPYDQ 440
++ EP+ Y I S YPQ YP ++ ++ I V G IHL F +D +C YD
Sbjct: 13 VYAEPTMYGEILSPNYPQAYPSEVEKSWDIEVPEGYGIHLYFT---HLDIELSENCAYDS 69
Query: 441 LQIYASGRNIGEFCG---SQRP-API----DTNSNAVDLLFFTDESGDSR--GWKLHY-T 587
+QI + G CG S P +PI N + ++F +D S + R G+ +Y
Sbjct: 70 VQIISGDTEEGRLCGQRSSNNPHSPIVEEFQVPYNKLQVIFKSDFSNEERFTGFAAYYVA 129
Query: 588 TEIIKC 605
T+I +C
Sbjct: 130 TDINEC 135
>ref|NP_958850.1| complement C1s subcomponent precursor [Homo sapiens].
Length = 688
Score = 363 bits (931), Expect(2) = e-109
Identities = 212/563 (37%), Positives = 304/563 (53%), Gaps = 16/563 (2%)
Frame = +3
Query: 3 NKMLLTFHTDFSNEENGTIMFYKGFLAYYQAVDLDECAFQHNSGEDNAQQPRCQHLCHNY 182
NK+ + F +DFSNEE T GF AYY A D++EC D P C H C+N+
Sbjct: 104 NKLQVIFKSDFSNEERFT-----GFAAYYVATDINECT-------DFVDVP-CSHFCNNF 150
Query: 183 IGGYFCSCHLGYELQEDGHSCQAECSRELFTEPSGYISSLEYPQPYPPDLRCNYSIRVER 362
IGGYFCSC Y L +D +C CS ++FT G I+S YP+PYP + RC Y IR+E+
Sbjct: 151 IGGYFCSCPPEYFLHDDMKNCGVNCSGDVFTALIGEIASPNYPKPYPENSRCEYQIRLEK 210
Query: 363 GLTIHLKF-LEPFEIDDHQQVHCPYDQLQIYASGRNIGEFCGSQRPAP--IDTNSNAVDL 533
G + + E F+++ D L A R G +CG P P I+T SNA+D+
Sbjct: 211 GFQVVVTLRREDFDVEAADSAGNCLDSLVFVAGDRQFGPYCGHGFPGPLNIETKSNALDI 270
Query: 534 LFFTDESGDSRGWKLHYTTEIIKCPQPKTLDTFTVIQDLQPQYEFRDYFIASCKQGYQLM 713
+F TD +G +GWKL Y + + CP+ T + +V + + +Y FRD +C G++++
Sbjct: 271 IFQTDLTGQKKGWKLRYHGDPMPCPKEDTPN--SVWEPAKAKYVFRDVVQITCLDGFEVV 328
Query: 714 EGKQVLLSFTAVCQDDGTWHRAMPRCKIKDCGRPKSLPNGDFNYITTKGVNTYQARIQYY 893
EG+ SF + CQ +G W + +C+ DCG P+S+ NG + + + I+Y
Sbjct: 329 EGRVGATSFYSTCQSNGKWSNSKLKCQPVDCGIPESIENGK---VEDPESTLFGSVIRYT 385
Query: 894 CREPYYKMHTGGGSSKSERGAYTCSAQGVWMNELEGETMPRCLPVCGKPVNPVEEKQRII 1073
C EPYY M GGG G Y C+ G W+NE+ G +P+C+PVCG P P EEKQRII
Sbjct: 386 CEEPYYYMENGGG------GEYHCAGNGSWVNEVLGPELPKCVPVCGVPREPFEEKQRII 439
Query: 1074 GGRKAKPGSFPWQAFTNIYGHGGGALLGDRWILTAAHTLKPKEYDEQNNASVDVFLGHVN 1253
GG A +FPWQ F + GGAL+ + W+LTAAH + + N +++G +
Sbjct: 440 GGSDADIKNFPWQVFFD-NPWAGGALINEYWVLTAAHVV-------EGNREPTMYVGSTS 491
Query: 1254 V--DEITKLGNHPVRRFIIHPDYR----QEDSHSFEGDIALLELENSVTLGPDILPICLP 1415
V + K IHP ++ E +F+ DIAL+ L++ V +GP + PICLP
Sbjct: 492 VQTSRLAKSKMLTPEHVFIHPGWKLLEVPEGRTNFDNDIALVRLKDPVKMGPTVSPICLP 551
Query: 1416 DNDTFYDW--GFMGYVSGFGITE-RKLSHDLRYVHLPIAKREMCQSWLQKKNRND----V 1574
+ Y+ G +G +SG+G TE R + L+ LP+A C+ +K D V
Sbjct: 552 GTSSDYNLMDGDLGLISGWGRTEKRDRAVRLKAARLPVAPLRKCKEVKVEKPTADAEAYV 611
Query: 1575 FSRNMFCAGSPTLKQDSCQGDSG 1643
F+ NM CAG DSC+GDSG
Sbjct: 612 FTPNMICAGGEK-GMDSCKGDSG 633
Score = 53.1 bits (126), Expect(2) = e-109
Identities = 26/54 (48%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Frame = +1
Query: 1630 RGTVEGVFAMKDEKND-QWVAMGIVSWGIGCGEGYGFYTKVLNYVDWIKKEMEK 1788
+G G FA++D + ++ A G+VSWG CG YG YT+V NYVDWI K M++
Sbjct: 629 KGDSGGAFAVQDPNDKTKFYAAGLVSWGPQCGT-YGLYTRVKNYVDWIMKTMQE 681
Score = 51.2 bits (121), Expect = 3e-06
Identities = 40/126 (31%), Positives = 61/126 (48%), Gaps = 13/126 (10%)
Frame = +3
Query: 267 LFTEPSGY--ISSLEYPQPYPPDLRCNYSIRVERGLTIHLKFLEPFEIDDHQQVHCPYDQ 440
++ EP+ Y I S YPQ YP ++ ++ I V G IHL F +D +C YD
Sbjct: 13 VYAEPTMYGEILSPNYPQAYPSEVEKSWDIEVPEGYGIHLYFT---HLDIELSENCAYDS 69
Query: 441 LQIYASGRNIGEFCG---SQRP-API----DTNSNAVDLLFFTDESGDSR--GWKLHY-T 587
+QI + G CG S P +PI N + ++F +D S + R G+ +Y
Sbjct: 70 VQIISGDTEEGRLCGQRSSNNPHSPIVEEFQVPYNKLQVIFKSDFSNEERFTGFAAYYVA 129
Query: 588 TEIIKC 605
T+I +C
Sbjct: 130 TDINEC 135
>ref|NP_057630.2| complement C1r subcomponent-like protein precursor [Homo sapiens].
Length = 487
Score = 314 bits (804), Expect(2) = e-100
Identities = 141/257 (54%), Positives = 188/257 (73%), Gaps = 1/257 (0%)
Frame = +3
Query: 876 ARIQYYCREPYYKMHTGGGSSKSERGAYTCSAQGVWMNELEGETMPRCLPVCGKPVNPVE 1055
A++Q +C+EPYY+ + GA TC+ G W + +GE + +C+PVCG+PV P+
Sbjct: 189 AKVQNHCQEPYYQA--------AAAGALTCATPGTWKDRQDGEEVLQCMPVCGRPVTPIA 240
Query: 1056 EKQRIIGGRKAKPGSFPWQAFTNIYGHGGGALLGDRWILTAAHTLKPKE-YDEQNNASVD 1232
+ Q +G +AK G+FPWQAFT+I+G GGGALLGDRWILTAAHT+ PK+ + N SV+
Sbjct: 241 QNQTTLGSSRAKLGNFPWQAFTSIHGRGGGALLGDRWILTAAHTIYPKDSVSLRKNQSVN 300
Query: 1233 VFLGHVNVDEITKLGNHPVRRFIIHPDYRQEDSHSFEGDIALLELENSVTLGPDILPICL 1412
VFLGH +DE+ KLGNHPV R ++HPDYRQ +SH+F GDIALLEL++S+ LGP++LP+CL
Sbjct: 301 VFLGHTAIDEMLKLGNHPVHRVVVHPDYRQNESHNFSGDIALLELQHSIPLGPNVLPVCL 360
Query: 1413 PDNDTFYDWGFMGYVSGFGITERKLSHDLRYVHLPIAKREMCQSWLQKKNRNDVFSRNMF 1592
PDN+T Y G +GYVSGFG+ L+ +L+Y LP+A RE C +WLQK+ R +VFS NMF
Sbjct: 361 PDNETLYRSGLLGYVSGFGMEMGWLTTELKYSRLPVAPREACNAWLQKRQRPEVFSDNMF 420
Query: 1593 CAGSPTLKQDSCQGDSG 1643
C G T + CQGDSG
Sbjct: 421 CVGDETQRHSVCQGDSG 437
Score = 71.6 bits (174), Expect(2) = e-100
Identities = 32/51 (62%), Positives = 36/51 (70%)
Frame = +1
Query: 1630 RGTVEGVFAMKDEKNDQWVAMGIVSWGIGCGEGYGFYTKVLNYVDWIKKEM 1782
+G V+ + D WVA GIVSWGIGCGEGY FYTKVL+YVDWIK M
Sbjct: 433 QGDSGSVYVVWDNHAHHWVATGIVSWGIGCGEGYDFYTKVLSYVDWIKGVM 483
>ref|NP_001027019.1| mannan-binding lectin serine protease 1 isoform 3 precursor [Homo
sapiens].
Length = 380
Score = 230 bits (586), Expect = 4e-60
Identities = 109/262 (41%), Positives = 158/262 (60%)
Frame = +3
Query: 9 MLLTFHTDFSNEENGTIMFYKGFLAYYQAVDLDECAFQHNSGEDNAQQPRCQHLCHNYIG 188
M +TF +DFSNEE T GF A+Y AVD+DEC E ++ C H CHNYIG
Sbjct: 114 MSITFRSDFSNEERFT-----GFDAHYMAVDVDECK------EREDEELSCDHYCHNYIG 162
Query: 189 GYFCSCHLGYELQEDGHSCQAECSRELFTEPSGYISSLEYPQPYPPDLRCNYSIRVERGL 368
GY+CSC GY L D +C+ ECS LFT+ +G I+S ++P PYP C Y+I +E G
Sbjct: 163 GYYCSCRFGYILHTDNRTCRVECSDNLFTQRTGVITSPDFPNPYPKSSECLYTIELEEGF 222
Query: 369 TIHLKFLEPFEIDDHQQVHCPYDQLQIYASGRNIGEFCGSQRPAPIDTNSNAVDLLFFTD 548
++L+F + F+I+DH +V CPYD ++I + +G FCG + P PI T S++V +LF +D
Sbjct: 223 MVNLQFEDIFDIEDHPEVPCPYDYIKIKVGPKVLGPFCGEKAPEPISTQSHSVLILFHSD 282
Query: 549 ESGDSRGWKLHYTTEIIKCPQPKTLDTFTVIQDLQPQYEFRDYFIASCKQGYQLMEGKQV 728
SG++RGW+L Y +CP+ + I+ Q +Y F+D + SC GY++++
Sbjct: 283 NSGENRGWRLSYRAAGNECPELQP-PVHGKIEPSQAKYFFKDQVLVSCDTGYKVLKDNVE 341
Query: 729 LLSFTAVCQDDGTWHRAMPRCK 794
+ +F C DGTW +P CK
Sbjct: 342 MDTFQIECLKDGTWSNKIPTCK 363
>ref|NP_005134.1| haptoglobin isoform 1 preproprotein [Homo sapiens].
Length = 406
Score = 141 bits (356), Expect(2) = 3e-39
Identities = 96/311 (30%), Positives = 155/311 (49%), Gaps = 23/311 (7%)
Frame = +3
Query: 780 MPRCKIKD-CGRPKSLPNGDFNYITTKGVNTYQARIQYYCREPYYKMHTGGGSSKSERGA 956
+P C+ D C +P + +G Y+ + ++Y C+ YYK+ T G G
Sbjct: 83 LPECEADDGCPKPPEIAHG---YV--------EHSVRYQCKN-YYKLRTEGD------GV 124
Query: 957 YTCSAQGVWMNELEGETMPRCLPVCGKPVNPVEEKQRIIGGRKAKPGSFPWQAFTNIYGH 1136
YT + + W+N+ G+ +P C VCGKP NP QRI+GG GSFPWQA + H
Sbjct: 125 YTLNNEKQWINKAVGDKLPECEAVCGKPKNPANPVQRILGGHLDAKGSFPWQA--KMVSH 182
Query: 1137 ----GGGALLGDRWILTAAHTLKPKEYDEQNNA-----SVDVFLGHVNVDEITKLGNHPV 1289
G L+ ++W+LT A L + E A ++ +++G + EI K+
Sbjct: 183 HNLTTGATLINEQWLLTTAKNLF-LNHSENATAKDIAPTLTLYVGKKQLVEIEKV----- 236
Query: 1290 RRFIIHPDYRQEDSHSFEGDIALLELENSVTLGPDILPICLPDNDTFYDWGFMGYVSGFG 1469
++HP+Y Q DI L++L+ V++ ++PICLP D + + G +GYVSG+G
Sbjct: 237 ---VLHPNYSQV-------DIGLIKLKQKVSVNERVMPICLPSKD-YAEVGRVGYVSGWG 285
Query: 1470 ITER-KLSHDLRYVHLPIAKREMC------QSWLQKKNRND------VFSRNMFCAGSPT 1610
K + L+YV LP+A ++ C + +KK + + + FCAG
Sbjct: 286 RNANFKFTDHLKYVMLPVADQDQCIRHYEGSTVPEKKTPKSPVGVQPILNEHTFCAGMSK 345
Query: 1611 LKQDSCQGDSG 1643
++D+C GD+G
Sbjct: 346 YQEDTCYGDAG 356
Score = 40.4 bits (93), Expect(2) = 3e-39
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +1
Query: 1633 GTVEGVFAMKDEKNDQWVAMGIVSWGIGCGEG-YGFYTKVLNYVDWIKK 1776
G FA+ D + D W A GI+S+ C YG Y KV + DW++K
Sbjct: 353 GDAGSAFAVHDLEEDTWYATGILSFDKSCAVAEYGVYVKVTSIQDWVQK 401
>ref|NP_001119574.1| haptoglobin isoform 2 preproprotein [Homo sapiens].
Length = 347
Score = 137 bits (346), Expect(2) = 5e-38
Identities = 89/276 (32%), Positives = 141/276 (51%), Gaps = 22/276 (7%)
Frame = +3
Query: 882 IQYYCREPYYKMHTGGGSSKSERGAYTCSAQGVWMNELEGETMPRCLPVCGKPVNPVEEK 1061
++Y C+ YYK+ T G G YT + + W+N+ G+ +P C VCGKP NP
Sbjct: 48 VRYQCKN-YYKLRTEGD------GVYTLNNEKQWINKAVGDKLPECEAVCGKPKNPANPV 100
Query: 1062 QRIIGGRKAKPGSFPWQAFTNIYGH----GGGALLGDRWILTAAHTLKPKEYDEQNNA-- 1223
QRI+GG GSFPWQA + H G L+ ++W+LT A L + E A
Sbjct: 101 QRILGGHLDAKGSFPWQA--KMVSHHNLTTGATLINEQWLLTTAKNLF-LNHSENATAKD 157
Query: 1224 ---SVDVFLGHVNVDEITKLGNHPVRRFIIHPDYRQEDSHSFEGDIALLELENSVTLGPD 1394
++ +++G + EI K+ ++HP+Y Q DI L++L+ V++
Sbjct: 158 IAPTLTLYVGKKQLVEIEKV--------VLHPNYSQV-------DIGLIKLKQKVSVNER 202
Query: 1395 ILPICLPDNDTFYDWGFMGYVSGFGITER-KLSHDLRYVHLPIAKREMC------QSWLQ 1553
++PICLP D + + G +GYVSG+G K + L+YV LP+A ++ C + +
Sbjct: 203 VMPICLPSKD-YAEVGRVGYVSGWGRNANFKFTDHLKYVMLPVADQDQCIRHYEGSTVPE 261
Query: 1554 KKNRND------VFSRNMFCAGSPTLKQDSCQGDSG 1643
KK + + + FCAG ++D+C GD+G
Sbjct: 262 KKTPKSPVGVQPILNEHTFCAGMSKYQEDTCYGDAG 297
Score = 40.4 bits (93), Expect(2) = 5e-38
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +1
Query: 1633 GTVEGVFAMKDEKNDQWVAMGIVSWGIGCGEG-YGFYTKVLNYVDWIKK 1776
G FA+ D + D W A GI+S+ C YG Y KV + DW++K
Sbjct: 294 GDAGSAFAVHDLEEDTWYATGILSFDKSCAVAEYGVYVKVTSIQDWVQK 342
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 77,234,015
Number of extensions: 2258942
Number of successful extensions: 10043
Number of sequences better than 1.0e-05: 179
Number of HSP's gapped: 9437
Number of HSP's successfully gapped: 378
Length of query: 639
Length of database: 18,297,164
Length adjustment: 109
Effective length of query: 530
Effective length of database: 14,704,088
Effective search space: 7793166640
Effective search space used: 7793166640
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007298
(1917 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001106827.1| complement C1r-B subcomponent precursor [Mus... 921 0.0
Alignment gi|NP_075632.3| complement C1r-A subcomponent precursor [Mus mu... 934 0.0
Alignment gi|NP_001003893.1| mannan-binding lectin serine protease 2 isof... 417 e-125
Alignment gi|NP_032581.2| mannan-binding lectin serine protease 1 [Mus mu... 389 e-115
Alignment gi|NP_776289.2| complement C1s-B subcomponent precursor [Mus mu... 341 e-102
Alignment gi|NP_001091086.1| complement C1s-A subcomponent [Mus musculus]. 339 e-100
Alignment gi|NP_659187.2| complement C1s-A subcomponent [Mus musculus]. 339 e-100
Alignment gi|NP_851989.3| complement C1r subcomponent-like protein precur... 308 1e-83
Alignment gi|NP_059066.1| haptoglobin precursor [Mus musculus]. 137 3e-32
Alignment gi|NP_082178.2| transmembrane protease serine 6 [Mus musculus]. 106 2e-29
>ref|NP_001106827.1| complement C1r-B subcomponent precursor [Mus musculus].
Length = 706
Score = 921 bits (2381), Expect(2) = 0.0
Identities = 424/549 (77%), Positives = 472/549 (85%), Gaps = 2/549 (0%)
Frame = +3
Query: 3 NKMLLTFHTDFSNEENGTIMFYKGFLAYYQAVDLDECAFQHNSGEDNAQQPRCQHLCHNY 182
NKMLLTFHTDFSNEENGTIMFYKGFLAYYQAVDLDECA Q NS E+ Q PRCQHLCHNY
Sbjct: 109 NKMLLTFHTDFSNEENGTIMFYKGFLAYYQAVDLDECASQPNSVEEGLQ-PRCQHLCHNY 167
Query: 183 IGGYFCSCHLGYELQEDGHSCQAECSRELFTEPSGYISSLEYPQPYPPDLRCNYSIRVER 362
+GGYFCSCH GYELQ+DG SCQAECS EL+TEPSGY+SSLEYPQPYPPDLRCNYSIRVER
Sbjct: 168 VGGYFCSCHPGYELQKDGQSCQAECSSELYTEPSGYVSSLEYPQPYPPDLRCNYSIRVER 227
Query: 363 GLTIHLKFLEPFEIDDHQQVHCPYDQLQIYASGRNIGEFCGSQRPAPIDTNSNAVDLLFF 542
GLT+HLKFL+PFEIDDHQQVHCPYDQLQIYA+G+N+GEFCG QRP +DT+SNAVDLLFF
Sbjct: 228 GLTVHLKFLDPFEIDDHQQVHCPYDQLQIYANGKNLGEFCGKQRPPDLDTSSNAVDLLFF 287
Query: 543 TDESGDSRGWKLHYTTEIIKCPQPKTLDTFTVIQDLQPQYEFRDYFIASCKQGYQLMEGK 722
TDESGDSRGWKLHYTTE IKCPQPK LD FT+IQD QPQY+FRDYF +CKQGYQLMEG
Sbjct: 288 TDESGDSRGWKLHYTTETIKCPQPKALDEFTIIQDPQPQYQFRDYFTVTCKQGYQLMEGN 347
Query: 723 QVLLSFTAVCQDDGTWHRAMPRCKIKDCGRPKSLPNGDFNYITTKGVNTYQARIQYYCRE 902
Q LLSFTAVCQ DGTWHRAMPRCKIK+CG+P+SL NGDF YITTKGV TY+A IQY+C E
Sbjct: 348 QALLSFTAVCQHDGTWHRAMPRCKIKNCGQPQSLSNGDFRYITTKGVTTYEASIQYHCHE 407
Query: 903 PYYKMHTGGGSSKSERGAYTCSAQGVWMNELEGETMPRCLPVCGKPVNPVEEKQRIIGGR 1082
PYYKM T GSS+S RG YTC+AQG+W NE EGE MPRCLPVCGKPVNPV +K+RIIGG+
Sbjct: 408 PYYKMLTRAGSSESMRGIYTCTAQGIWKNEEEGEKMPRCLPVCGKPVNPVTQKERIIGGQ 467
Query: 1083 KAKPGSFPWQAFTNIYGHGGGALLGDRWILTAAHTLKPK--EYDEQNNASVDVFLGHVNV 1256
A+PG+FPWQAFT IYG GGGALLGDRWILTAAHT+ PK + N VFLGH N+
Sbjct: 468 PARPGNFPWQAFTTIYGPGGGALLGDRWILTAAHTIYPKYPNKGKNTNPRTLVFLGHTNM 527
Query: 1257 DEITKLGNHPVRRFIIHPDYRQEDSHSFEGDIALLELENSVTLGPDILPICLPDNDTFYD 1436
++I KLG+HPVRR IIHPDYRQE+ +FEGDIALLELENSVTLGP++LPICLPDN+TFY
Sbjct: 528 EQIQKLGHHPVRRVIIHPDYRQEEPDNFEGDIALLELENSVTLGPELLPICLPDNETFYG 587
Query: 1437 WGFMGYVSGFGITERKLSHDLRYVHLPIAKREMCQSWLQKKNRNDVFSRNMFCAGSPTLK 1616
G MGYVSGFG T ++ LR+V LP+A RE CQ WL K FS+NMFC+G P ++
Sbjct: 588 QGLMGYVSGFGTTGNRIPFHLRFVRLPVADREACQRWLWTKKDTSPFSQNMFCSGDPAVQ 647
Query: 1617 QDSCQGDSG 1643
QD+CQGDSG
Sbjct: 648 QDACQGDSG 656
Score = 91.3 bits (225), Expect(2) = 0.0
Identities = 40/51 (78%), Positives = 43/51 (84%)
Frame = +1
Query: 1630 RGTVEGVFAMKDEKNDQWVAMGIVSWGIGCGEGYGFYTKVLNYVDWIKKEM 1782
+G GVFA++D D WVA GIVSWGIGCGEGYGFYTKVLNYVDWIKKEM
Sbjct: 652 QGDSGGVFAVRDRNRDIWVATGIVSWGIGCGEGYGFYTKVLNYVDWIKKEM 702
Score = 56.2 bits (134), Expect = 9e-08
Identities = 46/170 (27%), Positives = 75/170 (44%), Gaps = 23/170 (13%)
Frame = +3
Query: 285 GYISSLEYPQPYPPDLRCNYSIRVERGLTIHLKFLEPFEIDDHQQVHCPYDQLQIYASGR 464
G ++S YP+PYP DL I V G + L F ++ D C YD ++I A +
Sbjct: 26 GEVTSPLYPKPYPSDLETTTVITVPMGYRVKLVF---WQFDVEPSEGCLYDYVKISADKQ 82
Query: 465 NIGEFCGSQRPAPID---------TNSNAVDLLFFTDESGDSRGWKLHY--------TTE 593
+G FCG Q +P+ + N + L F TD S + G + Y +
Sbjct: 83 TLGRFCG-QLDSPLGNPPGSKEFMSQGNKMLLTFHTDFSNEENGTIMFYKGFLAYYQAVD 141
Query: 594 IIKC-PQPKTLDTFTVIQDLQPQ-----YEFRDYFIASCKQGYQLMEGKQ 725
+ +C QP +++ + LQP+ + + + SC GY+L + Q
Sbjct: 142 LDECASQPNSVE-----EGLQPRCQHLCHNYVGGYFCSCHPGYELQKDGQ 186
>ref|NP_075632.3| complement C1r-A subcomponent precursor [Mus musculus].
Length = 707
Score = 934 bits (2414), Expect = 0.0
Identities = 428/550 (77%), Positives = 482/550 (87%), Gaps = 3/550 (0%)
Frame = +3
Query: 3 NKMLLTFHTDFSNEENGTIMFYKGFLAYYQAVDLDECAFQHNSGEDNAQQPRCQHLCHNY 182
NKMLLTFHTDFSNEENGTIMFYKGFLAYYQAVDLDECA Q NS E+ Q PRCQHLCHNY
Sbjct: 109 NKMLLTFHTDFSNEENGTIMFYKGFLAYYQAVDLDECASQPNSVEEGLQ-PRCQHLCHNY 167
Query: 183 IGGYFCSCHLGYELQEDGHSCQAECSRELFTEPSGYISSLEYPQPYPPDLRCNYSIRVER 362
+GGYFCSCH GYELQ+DG SCQAECS EL+TEPSGY+SSLEYPQPYPPDLRCNYSIRVER
Sbjct: 168 VGGYFCSCHPGYELQKDGQSCQAECSSELYTEPSGYVSSLEYPQPYPPDLRCNYSIRVER 227
Query: 363 GLTIHLKFLEPFEIDDHQQVHCPYDQLQIYASGRNIGEFCGSQRPAPIDTNSNAVDLLFF 542
GLT+HLKFL+PFEIDDHQQVHCPYDQLQIYA+G+N+GEFCG QRP +DT+SNAVDLLFF
Sbjct: 228 GLTVHLKFLDPFEIDDHQQVHCPYDQLQIYANGKNLGEFCGKQRPPDLDTSSNAVDLLFF 287
Query: 543 TDESGDSRGWKLHYTTEIIKCPQPKTLDTFTVIQDLQPQYEFRDYFIASCKQGYQLMEGK 722
TDESGDSRGWKLHYTTE IKCPQPK LD FT+IQD QPQY+FRDYFI +CKQGYQLMEG
Sbjct: 288 TDESGDSRGWKLHYTTETIKCPQPKALDEFTIIQDPQPQYQFRDYFIVTCKQGYQLMEGN 347
Query: 723 QVLLSFTAVCQDDGTWHRAMPRCKIKDCGRPKSLPNGDFNYITTKGVNTYQARIQYYCRE 902
Q LLSFTAVCQ+DGTWHRAMPRCKIK+CG+P+SL NGDF YITTKGV TY+A IQY+C E
Sbjct: 348 QALLSFTAVCQNDGTWHRAMPRCKIKNCGQPQSLSNGDFRYITTKGVTTYEASIQYHCHE 407
Query: 903 PYYKMHTGGGSSKSERGAYTCSAQGVWMNELEGETMPRCLPVCGKPVNPVEEKQRIIGGR 1082
PYYKM T GSS+S RG YTC+AQG+W NE EGE MPRCLPVCGKPVNPV +K+RII G+
Sbjct: 408 PYYKMLTRAGSSESMRGIYTCTAQGIWKNEEEGEKMPRCLPVCGKPVNPVTQKERIIRGQ 467
Query: 1083 KAKPGSFPWQAFTNIYGHGGGALLGDRWILTAAHTLKPKEYDEQN---NASVDVFLGHVN 1253
A+PG+FPWQAFT +G GGGALLGDRWILTAAHT+ PK ++++N N + VFLGH N
Sbjct: 468 PARPGNFPWQAFTTTHGRGGGALLGDRWILTAAHTIYPKHHNKENDNANPKMLVFLGHTN 527
Query: 1254 VDEITKLGNHPVRRFIIHPDYRQEDSHSFEGDIALLELENSVTLGPDILPICLPDNDTFY 1433
V++I KLG+HPVRR IIHPDYRQ++ ++FEGDIALLELENSVTLGP++LPICLPDN+TFY
Sbjct: 528 VEQIKKLGHHPVRRVIIHPDYRQDEPNNFEGDIALLELENSVTLGPELLPICLPDNETFY 587
Query: 1434 DWGFMGYVSGFGITERKLSHDLRYVHLPIAKREMCQSWLQKKNRNDVFSRNMFCAGSPTL 1613
G MGYVSGFGITE KL+ DLR+V LP+A E CQ WLQ K FS+NMFC+G P +
Sbjct: 588 GQGLMGYVSGFGITEDKLAFDLRFVRLPVADSEACQRWLQTKKDTSPFSQNMFCSGDPAV 647
Query: 1614 KQDSCQGDSG 1643
+QD+CQGDSG
Sbjct: 648 QQDACQGDSG 657
Score = 91.7 bits (226), Expect = 2e-18
Identities = 48/86 (55%), Positives = 53/86 (61%)
Frame = +1
Query: 1525 NERCARAGSRKKIGTMCFRGTCSVLGPQL*SRIPARGTVEGVFAMKDEKNDQWVAMGIVS 1704
+E C R KK T F G + +G GVFA++D D WVA GIVS
Sbjct: 619 SEACQRWLQTKK-DTSPFSQNMFCSGDPAVQQDACQGDSGGVFAVRDRNRDIWVATGIVS 677
Query: 1705 WGIGCGEGYGFYTKVLNYVDWIKKEM 1782
WGIGCGEGYGFYTKVLNYVDWIKKEM
Sbjct: 678 WGIGCGEGYGFYTKVLNYVDWIKKEM 703
Score = 55.8 bits (133), Expect = 1e-07
Identities = 46/170 (27%), Positives = 75/170 (44%), Gaps = 23/170 (13%)
Frame = +3
Query: 285 GYISSLEYPQPYPPDLRCNYSIRVERGLTIHLKFLEPFEIDDHQQVHCPYDQLQIYASGR 464
G ++S YP+PYP DL I V G + L F ++ D C YD ++I A +
Sbjct: 26 GEVTSPLYPKPYPSDLETTTVITVPMGYRVKLVF---WQFDVEPSEGCFYDYVKISADKQ 82
Query: 465 NIGEFCGSQRPAPID---------TNSNAVDLLFFTDESGDSRGWKLHY--------TTE 593
+G FCG Q +P+ + N + L F TD S + G + Y +
Sbjct: 83 TLGRFCG-QLDSPLGNPPGSKEFMSQGNKMLLTFHTDFSNEENGTIMFYKGFLAYYQAVD 141
Query: 594 IIKC-PQPKTLDTFTVIQDLQPQ-----YEFRDYFIASCKQGYQLMEGKQ 725
+ +C QP +++ + LQP+ + + + SC GY+L + Q
Sbjct: 142 LDECASQPNSVE-----EGLQPRCQHLCHNYVGGYFCSCHPGYELQKDGQ 186
>ref|NP_001003893.1| mannan-binding lectin serine protease 2 isoform 1 [Mus musculus].
Length = 685
Score = 417 bits (1071), Expect(2) = e-125
Identities = 229/556 (41%), Positives = 311/556 (55%), Gaps = 10/556 (1%)
Frame = +3
Query: 15 LTFHTDFSNEENGTIMFYKGFLAYYQAVDLDECAFQHNSGEDNAQQPRCQHLCHNYIGGY 194
+TFH+D+SNE+ T GF A+Y A D+DEC C H CHNY+GGY
Sbjct: 115 VTFHSDYSNEKPFT-----GFEAFYAAEDVDECRVSLGDSVP------CDHYCHNYLGGY 163
Query: 195 FCSCHLGYELQEDGHSCQAECSRELFTEPSGYISSLEYPQPYPPDLRCNYSIRVERGLTI 374
+CSC GY L ++ H+C A CS ++FT SGY+SS EYPQPYP C YSIR+E G ++
Sbjct: 164 YCSCRAGYVLHQNKHTCSALCSGQVFTGRSGYLSSPEYPQPYPKLSSCTYSIRLEDGFSV 223
Query: 375 HLKFLEPFEIDDHQQVHCPYDQLQIYASGRNIGEFCGSQRPAPIDTNSNAVDLLFFTDES 554
L F+E F+++ H + CPYD L+I G FCG P I+T+S+ V + F TDES
Sbjct: 224 ILDFVESFDVETHPEAQCPYDSLKIQTDKGEHGPFCGKTLPPRIETDSHKVTITFATDES 283
Query: 555 GDSRGWKLHYTTEIIKCPQPKTLDTFTVIQDLQPQYEFRDYFIASCKQGYQLMEGKQVLL 734
G+ GWK+HYT+ CP P T I +Q Y +D F CK G++L++G L
Sbjct: 284 GNHTGWKIHYTSTARPCPDP-TAPPNGSISPVQAIYVLKDRFSVFCKTGFELLQGSVPLK 342
Query: 735 SFTAVCQDDGTWHRAMPRCKIKDCGRPKSLPNGDFNYITTKGVNTYQARIQYYCREPYYK 914
SFTAVCQ DG+W R MP C I DCG P LPNG +YIT V TY+A IQY C E +Y
Sbjct: 343 SFTAVCQKDGSWDRPMPECSIIDCGPPDDLPNGHVDYITGPEVTTYKAVIQYSCEETFYT 402
Query: 915 MHTGGGSSKSERGAYTCSAQGVWMNELEGETMPRCLPVCGKPVNPVEEKQRIIGGRKAKP 1094
M S G Y C A G W + + P C PVCG + + RI+GG+ AKP
Sbjct: 403 M--------SSNGKYVCEADGFWTSSKGEKLPPVCEPVCGLSTHTI--GGRIVGGQPAKP 452
Query: 1095 GSFPWQAFTNIYGH---GGGALLGDRWILTAAHTLKPKEYDEQNNASVDVFLGHVNVDEI 1265
G FPWQ + G GAL+ D W+LTAAH + Y+++ AS ++ + +
Sbjct: 453 GDFPWQVL--LLGQTTAAAGALIHDNWVLTAAHAV----YEKRMAAS----SLNIRMGIL 502
Query: 1266 TKLGNHPVR----RFIIHPDYRQEDSHSFEGDIALLELENSVTLGPDILPICLPDND--T 1427
+L H + IH Y F+ DIAL++L+N VT+ I+P+CLP + +
Sbjct: 503 KRLSPHYTQAWPEEIFIHEGYTH--GAGFDNDIALIKLKNKVTINGSIMPVCLPRKEAAS 560
Query: 1428 FYDWGFMGYVSGFGITER-KLSHDLRYVHLPIAKREMCQSWLQKKNRNDVFSRNMFCAGS 1604
F G V+G+G+T++ L+ +L +V +PIA + C + +K S NM CAG
Sbjct: 561 LMRTDFTGTVAGWGLTQKGLLARNLMFVDIPIADHQKCTAVYEKLYPGVRVSANMLCAGL 620
Query: 1605 PTLKQDSCQGDSGRGL 1652
T +DSC+GDSG L
Sbjct: 621 ETGGKDSCRGDSGGAL 636
Score = 50.8 bits (120), Expect(2) = e-125
Identities = 24/51 (47%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Frame = +1
Query: 1630 RGTVEGVFAMKDEKNDQWVAMGIVSWG-IGCG--EGYGFYTKVLNYVDWIK 1773
RG G D + +W GIVSWG I CG + YG YTKV+NY+ WI+
Sbjct: 629 RGDSGGALVFLDNETQRWFVGGIVSWGSINCGAADQYGVYTKVINYIPWIE 679
>ref|NP_032581.2| mannan-binding lectin serine protease 1 [Mus musculus].
Length = 704
Score = 389 bits (999), Expect(2) = e-115
Identities = 214/564 (37%), Positives = 312/564 (55%), Gaps = 19/564 (3%)
Frame = +3
Query: 9 MLLTFHTDFSNEENGTIMFYKGFLAYYQAVDLDECAFQHNSGEDNAQQPRCQHLCHNYIG 188
M +TF +DFSNEE T GF A+Y AVD+DEC E ++ C H CHNYIG
Sbjct: 119 MSVTFRSDFSNEERFT-----GFDAHYMAVDVDECK------EREDEELSCDHYCHNYIG 167
Query: 189 GYFCSCHLGYELQEDGHSCQAECSRELFTEPSGYISSLEYPQPYPPDLRCNYSIRVERGL 368
GY+CSC GY L D +C+ ECS LFT+ +G I+S +YP PYP C+Y+I +E G
Sbjct: 168 GYYCSCRFGYILHTDNRTCRVECSGNLFTQRTGTITSPDYPNPYPKSSECSYTIDLEEGF 227
Query: 369 TIHLKFLEPFEIDDHQQVHCPYDQLQIYASGRNIGEFCGSQRPAPIDTNSNAVDLLFFTD 548
+ L+F + F+I+DH +V CPYD ++I A + G FCG + P PI T +++V +LF +D
Sbjct: 228 MVSLQFEDIFDIEDHPEVPCPYDYIKIKAGSKVWGPFCGEKSPEPISTQTHSVQILFRSD 287
Query: 549 ESGDSRGWKLHYTTEIIKCPQPKTLDTFTVIQDLQPQYEFRDYFIASCKQGYQLMEGKQV 728
SG++RGW+L Y +CP+ + + I+ Q Y F+D + SC GY++++ +V
Sbjct: 288 NSGENRGWRLSYRAAGNECPKLQP-PVYGKIEPSQAVYSFKDQVLVSCDTGYKVLKDNEV 346
Query: 729 LLSFTAVCQDDGTWHRAMPRCKIKDCGRPKSLPNGDFNYITTKGVNTYQARIQYYCREPY 908
+ +F C DG W +P CKI DCG P L +G + T + TY++ I+Y C++PY
Sbjct: 347 MDTFQIECLKDGAWSNKIPTCKIVDCGAPAGLKHGLVTFSTRNNLTTYKSEIRYSCQQPY 406
Query: 909 YKMHTGGGSSKSERGAYTCSAQGVWMNELEGETMPRCLPVCGKPVNPVEEKQRIIGGRKA 1088
YKM + G YTCSA G W NE+ ++P CLPVCG P ++ RI GR A
Sbjct: 407 YKM------LHNTTGVYTCSAHGTWTNEVLKRSLPTCLPVCGVPKFSRKQISRIFNGRPA 460
Query: 1089 KPGSFPWQA-FTNIYGHG--GGALLGDRWILTAAHTLKPKEYDEQNNASVDVFLGHVNVD 1259
+ G+ PW A +++ G GG+LLG W+LTAAH L E+ L +
Sbjct: 461 QKGTMPWIAMLSHLNGQPFCGGSLLGSNWVLTAAHCLHQSLDPEEPTLHSSYLLSPSDFK 520
Query: 1260 EITKLGNH------------PVRRFIIHPDYRQEDSHSFEGDIALLELENSVTLGPDILP 1403
I +G H V+R +HP Y + +FE D+ L+EL S L ++P
Sbjct: 521 II--MGKHWRRRSDEDEQHLHVKRTTLHPLY---NPSTFENDLGLVELSESPRLNDFVMP 575
Query: 1404 ICLPDNDTFYDWGFMGYVSGFGIT-ERKLSHDLRYVHLPIAKREMCQ---SWLQKKNRND 1571
+CLP+ + G M VSG+G ++ +L + +PI + CQ + L+KK
Sbjct: 576 VCLPEQPS--TEGTMVIVSGWGKQFLQRFPENLMEIEIPIVNSDTCQEAYTPLKKK---- 629
Query: 1572 VFSRNMFCAGSPTLKQDSCQGDSG 1643
+++M CAG +D+C GDSG
Sbjct: 630 -VTKDMICAGEKEGGKDACAGDSG 652
Score = 45.4 bits (106), Expect(2) = e-115
Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +1
Query: 1633 GTVEGVFAMKDEKNDQWVAMGIVSWGIGCG--EGYGFYTKVLNYVDWIKK 1776
G G KD + DQW +G+VSWG CG + YG Y+ + DWI++
Sbjct: 649 GDSGGPMVTKDAERDQWYLVGVVSWGEDCGKKDRYGVYSYIYPNKDWIQR 698
>ref|NP_776289.2| complement C1s-B subcomponent precursor [Mus musculus].
Length = 694
Score = 341 bits (875), Expect(2) = e-102
Identities = 199/562 (35%), Positives = 304/562 (54%), Gaps = 15/562 (2%)
Frame = +3
Query: 3 NKMLLTFHTDFSNEENGTIMFYKGFLAYYQAVDLDECAFQHNSGEDNAQQPRCQHLCHNY 182
NK+ + F +DFS EE T GF AYY A+D++EC D P C H C+N+
Sbjct: 110 NKLQVVFTSDFSIEEQFT-----GFAAYYTAIDVNECT-------DFTDVP-CSHFCNNF 156
Query: 183 IGGYFCSCHLGYELQEDGHSCQAECSRELFTEPSGYISSLEYPQPYPPDLRCNYSIRVER 362
IGGYFCSC Y L +D +C CS ++FT G ISS YP PYP + RC Y I+++
Sbjct: 157 IGGYFCSCPPEYFLHDDMRNCGVNCSGDVFTALIGEISSPNYPNPYPENSRCEYQIQLQE 216
Query: 363 GLTIHLKF-LEPFEIDD-HQQVHCPYDQLQIYASGRNIGEFCGSQRPAP--IDTNSNAVD 530
G + + E F+++ + +CP D L A + G +CG P P I T SN +
Sbjct: 217 GFQVVVTMQREDFDVEPADSEGNCP-DSLTFAAKNQQFGPYCGDGFPGPLTIRTQSNTLG 275
Query: 531 LLFFTDESGDSRGWKLHYTTEIIKCPQPKTLDTFTVIQDLQPQYEFRDYFIASCKQGYQL 710
++F TD G +GWKL Y + I CP+ T ++ + + +Y F+D +C G+++
Sbjct: 276 IVFQTDLMGQKKGWKLRYHGDPISCPKESTANSNW--EPDKAKYVFKDVVKITCVDGFEV 333
Query: 711 MEGKQVLLSFTAVCQDDGTWHRAMPRCKIKDCGRPKSLPNGDFNYITTKGVNTYQARIQY 890
+EG S+ + CQ DG W + +C+ CG P + NG + + + I Y
Sbjct: 334 VEGHVSSTSYYSTCQSDGQWSNSGLKCQPVYCGIPDPIANGK---VEEPENSVFGTVIHY 390
Query: 891 YCREPYYKMHTGGGSSKSERGAYTCSAQGVWMNELEGETMPRCLPVCGKPVNPVEEKQRI 1070
C EPYY M E G Y C+A G W+N+ G +PRC+PVCG P P + +Q+I
Sbjct: 391 TCEEPYYYM------EHEEGGEYRCAANGRWVNDQLGIELPRCIPVCGVPTEPFQVQQKI 444
Query: 1071 IGGRKAKPGSFPWQAFTNIYGHGGGALLGDRWILTAAHTLKPKEYDEQNNASVDVFLGHV 1250
GG+ AK +FPWQ F N + GGAL+ + W+LTAAH + ++ ++ S+ + +
Sbjct: 445 FGGQPAKIENFPWQVFFN-HPTAGGALINEYWVLTAAHVV-----EKNSDPSMYAGITAL 498
Query: 1251 NVDEITKLGNHPVRRFIIHPDYRQEDS----HSFEGDIALLELENSVTLGPDILPICLPD 1418
+ ++ +R IIHP ++++D +F+ DIAL++L++ V +GP PICLP
Sbjct: 499 RLADLENAQRLYTKRVIIHPGWKEDDDLNPRTNFDNDIALVQLKDPVKMGPKFSPICLPG 558
Query: 1419 NDTFYDW--GFMGYVSGFGITERKLS-HDLRYVHLPIAKREMCQSWLQK----KNRNDVF 1577
+ Y+ G MG +SG+G TE++L +LR +P+ E C+ ++ + + V
Sbjct: 559 TSSEYNLSPGDMGLISGWGRTEKRLHVINLRGAKVPVTSLETCKQVKEENPTARPEDYVI 618
Query: 1578 SRNMFCAGSPTLKQDSCQGDSG 1643
+ NM CAG + DSC+GDSG
Sbjct: 619 TDNMICAGEKGV--DSCKGDSG 638
Score = 50.1 bits (118), Expect(2) = e-102
Identities = 26/55 (47%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Frame = +1
Query: 1630 RGTVEGVFAMK--DEKNDQWVAMGIVSWGIGCGEGYGFYTKVLNYVDWIKKEMEK 1788
+G G FA + + K ++ G+VSWG CG YG YTKV NYVDWI K M++
Sbjct: 634 KGDSGGAFAFQVPNVKAPKFYVAGLVSWGKKCG-AYGVYTKVKNYVDWILKTMQE 687
>ref|NP_001091086.1| complement C1s-A subcomponent [Mus musculus].
Length = 694
Score = 339 bits (869), Expect(2) = e-100
Identities = 203/565 (35%), Positives = 302/565 (53%), Gaps = 18/565 (3%)
Frame = +3
Query: 3 NKMLLTFHTDFSNEENGTIMFYKGFLAYYQAVDLDECAFQHNSGEDNAQQPRCQHLCHNY 182
NK+ + F +DFSNEE T GF AYY A+D++EC D P C H C+N+
Sbjct: 110 NKLQVVFTSDFSNEERFT-----GFAAYYTAIDINECT-------DFTDVP-CSHFCNNF 156
Query: 183 IGGYFCSCHLGYELQEDGHSCQAECSRELFTEPSGYISSLEYPQPYPPDLRCNYSIRVER 362
IGGYFCSC Y L +D +C CS ++FT G ISS YP PYP + RC Y I+++
Sbjct: 157 IGGYFCSCPPEYFLHDDMRNCGVNCSGDVFTALIGEISSPNYPNPYPENSRCEYQIQLQE 216
Query: 363 GLTIHLKF-LEPFEIDD-HQQVHCPYDQLQIYASGRNIGEFCGSQRPAP--IDTNSNAVD 530
G + + E F+++ + +CP D L + + G +CG+ P P I T SN +
Sbjct: 217 GFQVVVTMQREDFDVEPADSEGNCP-DSLTFASKNQQFGPYCGNGFPGPLTIRTQSNTLG 275
Query: 531 LLFFTDESGDSRGWKLHYTTEIIKCPQPKTLDTFTVIQDLQPQYEFRDYFIASCKQGYQL 710
++F TD G +GWKL Y + I C K + + Q + +Y F+D +C G+++
Sbjct: 276 IVFQTDLMGQKKGWKLRYHGDPISC--AKKITANSTWQPDKAKYVFKDVVKITCVDGFEV 333
Query: 711 MEGKQVLLSFTAVCQDDGTWHRAMPRCKIKDCGRPKSLPNGDFNYITTKGVNTYQARIQY 890
+EG S+ + CQ DG W + +C+ CG P + NG + + + + Y
Sbjct: 334 VEGHVSSTSYYSTCQSDGQWSNSGLKCQPVYCGIPDPIANGK---VEEPENSVFGTVVHY 390
Query: 891 YCREPYYKMHTGGGSSKSERGAYTCSAQGVWMNELEGETMPRCLPVCGKPVNPVEEKQRI 1070
C EPYY M E G Y C+A G W+N+ G +PRC+P CG P P + QRI
Sbjct: 391 TCEEPYYYM------EHEEGGEYRCAANGRWVNDQLGIELPRCIPACGVPTEPFQVHQRI 444
Query: 1071 IGGRKAKPGSFPWQAFTNIYGHGGGALLGDRWILTAAHTLKPKEYDEQNNASVDVFLGHV 1250
GG+ AK +FPWQ F N + GAL+ + W+LTAAH L + + +++G +
Sbjct: 445 FGGQPAKIENFPWQVFFN-HPRASGALINEYWVLTAAHVL-------EKISDPLMYVGTM 496
Query: 1251 NVDEITKLGNHP---VRRFIIHPDYRQEDS----HSFEGDIALLELENSVTLGPDILPIC 1409
+V T L N +R IHP +++ED +F+ DIAL++L++ V +GP + PIC
Sbjct: 497 SV-RTTLLENAQRLYSKRVFIHPSWKKEDDPNTRTNFDNDIALVQLKDPVKMGPKVSPIC 555
Query: 1410 LPDNDTFYDW--GFMGYVSGFGITERKL-SHDLRYVHLPIAKREMCQSWLQK----KNRN 1568
LP + Y+ G MG +SG+G TE+K+ +LR +P+ E C+ ++ + +
Sbjct: 556 LPGTSSEYNVSPGDMGLISGWGSTEKKVFVINLRGAKVPVTSLETCKQVKEENPTVRPED 615
Query: 1569 DVFSRNMFCAGSPTLKQDSCQGDSG 1643
VF+ NM CAG + DSC GDSG
Sbjct: 616 YVFTDNMICAGEKGV--DSCHGDSG 638
Score = 46.6 bits (109), Expect(2) = e-100
Identities = 21/32 (65%), Positives = 24/32 (75%)
Frame = +1
Query: 1693 GIVSWGIGCGEGYGFYTKVLNYVDWIKKEMEK 1788
G+VSWG CG YG YTKV NYVDWI K M++
Sbjct: 657 GLVSWGKRCGT-YGVYTKVKNYVDWILKTMQE 687
>ref|NP_659187.2| complement C1s-A subcomponent [Mus musculus].
Length = 694
Score = 339 bits (869), Expect(2) = e-100
Identities = 203/565 (35%), Positives = 302/565 (53%), Gaps = 18/565 (3%)
Frame = +3
Query: 3 NKMLLTFHTDFSNEENGTIMFYKGFLAYYQAVDLDECAFQHNSGEDNAQQPRCQHLCHNY 182
NK+ + F +DFSNEE T GF AYY A+D++EC D P C H C+N+
Sbjct: 110 NKLQVVFTSDFSNEERFT-----GFAAYYTAIDINECT-------DFTDVP-CSHFCNNF 156
Query: 183 IGGYFCSCHLGYELQEDGHSCQAECSRELFTEPSGYISSLEYPQPYPPDLRCNYSIRVER 362
IGGYFCSC Y L +D +C CS ++FT G ISS YP PYP + RC Y I+++
Sbjct: 157 IGGYFCSCPPEYFLHDDMRNCGVNCSGDVFTALIGEISSPNYPNPYPENSRCEYQIQLQE 216
Query: 363 GLTIHLKF-LEPFEIDD-HQQVHCPYDQLQIYASGRNIGEFCGSQRPAP--IDTNSNAVD 530
G + + E F+++ + +CP D L + + G +CG+ P P I T SN +
Sbjct: 217 GFQVVVTMQREDFDVEPADSEGNCP-DSLTFASKNQQFGPYCGNGFPGPLTIRTQSNTLG 275
Query: 531 LLFFTDESGDSRGWKLHYTTEIIKCPQPKTLDTFTVIQDLQPQYEFRDYFIASCKQGYQL 710
++F TD G +GWKL Y + I C K + + Q + +Y F+D +C G+++
Sbjct: 276 IVFQTDLMGQKKGWKLRYHGDPISC--AKKITANSTWQPDKAKYVFKDVVKITCVDGFEV 333
Query: 711 MEGKQVLLSFTAVCQDDGTWHRAMPRCKIKDCGRPKSLPNGDFNYITTKGVNTYQARIQY 890
+EG S+ + CQ DG W + +C+ CG P + NG + + + + Y
Sbjct: 334 VEGHVSSTSYYSTCQSDGQWSNSGLKCQPVYCGIPDPIANGK---VEEPENSVFGTVVHY 390
Query: 891 YCREPYYKMHTGGGSSKSERGAYTCSAQGVWMNELEGETMPRCLPVCGKPVNPVEEKQRI 1070
C EPYY M E G Y C+A G W+N+ G +PRC+P CG P P + QRI
Sbjct: 391 TCEEPYYYM------EHEEGGEYRCAANGRWVNDQLGIELPRCIPACGVPTEPFQVHQRI 444
Query: 1071 IGGRKAKPGSFPWQAFTNIYGHGGGALLGDRWILTAAHTLKPKEYDEQNNASVDVFLGHV 1250
GG+ AK +FPWQ F N + GAL+ + W+LTAAH L + + +++G +
Sbjct: 445 FGGQPAKIENFPWQVFFN-HPRASGALINEYWVLTAAHVL-------EKISDPLMYVGTM 496
Query: 1251 NVDEITKLGNHP---VRRFIIHPDYRQEDS----HSFEGDIALLELENSVTLGPDILPIC 1409
+V T L N +R IHP +++ED +F+ DIAL++L++ V +GP + PIC
Sbjct: 497 SV-RTTLLENAQRLYSKRVFIHPSWKKEDDPNTRTNFDNDIALVQLKDPVKMGPKVSPIC 555
Query: 1410 LPDNDTFYDW--GFMGYVSGFGITERKL-SHDLRYVHLPIAKREMCQSWLQK----KNRN 1568
LP + Y+ G MG +SG+G TE+K+ +LR +P+ E C+ ++ + +
Sbjct: 556 LPGTSSEYNVSPGDMGLISGWGSTEKKVFVINLRGAKVPVTSLETCKQVKEENPTVRPED 615
Query: 1569 DVFSRNMFCAGSPTLKQDSCQGDSG 1643
VF+ NM CAG + DSC GDSG
Sbjct: 616 YVFTDNMICAGEKGV--DSCHGDSG 638
Score = 46.6 bits (109), Expect(2) = e-100
Identities = 21/32 (65%), Positives = 24/32 (75%)
Frame = +1
Query: 1693 GIVSWGIGCGEGYGFYTKVLNYVDWIKKEMEK 1788
G+VSWG CG YG YTKV NYVDWI K M++
Sbjct: 657 GLVSWGKRCGT-YGVYTKVKNYVDWILKTMQE 687
>ref|NP_851989.3| complement C1r subcomponent-like protein precursor [Mus musculus].
Length = 482
Score = 308 bits (788), Expect = 1e-83
Identities = 144/274 (52%), Positives = 186/274 (67%), Gaps = 1/274 (0%)
Frame = +3
Query: 825 PNGDFNYITTKGVNTYQARIQYYCREPYYKMHTGGGSSKSERGAYTCSAQGVWMNELEGE 1004
PNGD +TT G +IQ +C++PYYK + G +C + W + +G
Sbjct: 171 PNGDTEAVTTPGA----PKIQNHCQDPYYKA--------DQTGTLSCPSSWKWKDRQDGG 218
Query: 1005 TMPRCLPVCGKPVNPVEEKQRIIGGRKAKPGSFPWQAFTNIYGHGGGALLGDRWILTAAH 1184
+P C+PVCG+PV P+ E G +AK G+FPWQAFT+IYG GGGALLGDRWILTAAH
Sbjct: 219 EVPECVPVCGRPVVPLAENPNTFGSSRAKLGNFPWQAFTSIYGRGGGALLGDRWILTAAH 278
Query: 1185 TLKPKEYDE-QNNASVDVFLGHVNVDEITKLGNHPVRRFIIHPDYRQEDSHSFEGDIALL 1361
T+ PK+ + N +V+VFLGH ++DE+ KLGNHPVRR ++HPDYRQ +SH+F GDIALL
Sbjct: 279 TIYPKDSIYLRRNQNVEVFLGHTDIDELLKLGNHPVRRVVVHPDYRQHESHNFNGDIALL 338
Query: 1362 ELENSVTLGPDILPICLPDNDTFYDWGFMGYVSGFGITERKLSHDLRYVHLPIAKREMCQ 1541
ELE V LGP++LP+CLPDN+T Y G GYVSGFG+ L+ L+Y LP+A RE C+
Sbjct: 339 ELEQRVPLGPNLLPVCLPDNETLYHSGLWGYVSGFGVEMGWLTTKLKYSKLPVAPREACE 398
Query: 1542 SWLQKKNRNDVFSRNMFCAGSPTLKQDSCQGDSG 1643
+WL ++ R +VFS NMFC G CQGDSG
Sbjct: 399 AWLHQRQRTEVFSDNMFCVGEEMQVNSVCQGDSG 432
Score = 73.9 bits (180), Expect = 4e-13
Identities = 34/73 (46%), Positives = 47/73 (64%)
Frame = +1
Query: 1567 TMCFRGTCSVLGPQL*SRIPARGTVEGVFAMKDEKNDQWVAMGIVSWGIGCGEGYGFYTK 1746
T F +G ++ +G V+ + D+ +WVA GIVSWGIGCG+GYGFYTK
Sbjct: 407 TEVFSDNMFCVGEEMQVNSVCQGDSGSVYVVWDDLALRWVATGIVSWGIGCGKGYGFYTK 466
Query: 1747 VLNYVDWIKKEME 1785
VL+Y+DWIK+ +E
Sbjct: 467 VLSYMDWIKRVIE 479
>ref|NP_059066.1| haptoglobin precursor [Mus musculus].
Length = 347
Score = 137 bits (345), Expect = 3e-32
Identities = 94/300 (31%), Positives = 149/300 (49%), Gaps = 20/300 (6%)
Frame = +3
Query: 804 CGRPKSLPNGDFNYITTKGVNTYQARIQYYCREPYYKMHTGGGSSKSERGAYTCSAQGVW 983
C +P + NG ++ ++Y CR+ +Y++ G G YT + + W
Sbjct: 33 CPKPPEIANGYVEHL-----------VRYRCRQ-FYRLRAEGD------GVYTLNDEKQW 74
Query: 984 MNELEGETMPRCLPVCGKPVNPVEEKQRIIGGRKAKPGSFPWQAFTNIYGHG---GGALL 1154
+N + GE +P C VCGKP +PV++ QRIIGG GSFPWQA I HG G L+
Sbjct: 75 VNTVAGEKLPECEAVCGKPKHPVDQVQRIIGGSMDAKGSFPWQA-KMISRHGLTTGATLI 133
Query: 1155 GDRWILTAAHTLKPKEYDEQN----NASVDVFLGHVNVDEITKLGNHPVRRFIIHPDYRQ 1322
D+W+LT A L + + ++ +++G + EI K+ HP
Sbjct: 134 SDQWLLTTAKNLFLNHSETASAKDITPTLTLYVGKNQLVEIEKVVLHP------------ 181
Query: 1323 EDSHSFEGDIALLELENSVTLGPDILPICLPDNDTFYDWGFMGYVSGFGITER-KLSHDL 1499
+HS DI L++L+ V + ++PICLP D + G +GYVSG+G + + L
Sbjct: 182 --NHSVV-DIGLIKLKQRVLVTERVMPICLPSKD-YIAPGRVGYVSGWGRNANFRFTDRL 237
Query: 1500 RYVHLPIAKREMC------QSWLQKKNRND------VFSRNMFCAGSPTLKQDSCQGDSG 1643
+YV LP+A ++ C + +KKN + + + FCAG ++D+C GD+G
Sbjct: 238 KYVMLPVADQDKCVVHYENSTVPEKKNLTSPVGVQPILNEHTFCAGLTKYQEDTCYGDAG 297
>ref|NP_082178.2| transmembrane protease serine 6 [Mus musculus].
Length = 811
Score = 106 bits (264), Expect(2) = 2e-29
Identities = 73/212 (34%), Positives = 112/212 (52%), Gaps = 13/212 (6%)
Frame = +3
Query: 1065 RIIGGRKAKPGSFPWQAFTNIYGHG--GGALLGDRWILTAAHTLKPKEYDEQNNASVD-- 1232
RI+GG + G +PWQA I G GGAL+ DRW++TAAH + E + AS
Sbjct: 576 RIVGGTVSSEGEWPWQASLQIRGRHICGGALIADRWVITAAHC-----FQEDSMASPKLW 630
Query: 1233 -VFLGHVNVD-----EITKLGNHPVRRFIIHPDYRQEDSHSFEGDIALLELENSVTLGPD 1394
VFLG + + E++ V R +HP Y +EDSH + D+ALL+L++ V
Sbjct: 631 TVFLGKMRQNSRWPGEVS----FKVSRLFLHP-YHEEDSHDY--DVALLQLDHPVVYSAT 683
Query: 1395 ILPICLPDNDTFYDWGFMGYVSGFGITER--KLSHDLRYVHLPIAKREMCQSWLQKKNRN 1568
+ P+CLP F++ G +++G+G +S+ L+ V + + +++C + +
Sbjct: 684 VRPVCLPARSHFFEPGQHCWITGWGAQREGGPVSNTLQKVDVQLVPQDLCSEAYRYQ--- 740
Query: 1569 DVFSRNMFCAGSPTLKQDSCQGDSGRGL-CNE 1661
S M CAG K+D+CQGDSG L C E
Sbjct: 741 --VSPRMLCAGYRKGKKDACQGDSGGPLVCRE 770
Score = 42.7 bits (99), Expect(2) = 2e-29
Identities = 16/39 (41%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Frame = +1
Query: 1666 EKNDQWVAMGIVSWGIGCGEG--YGFYTKVLNYVDWIKK 1776
E + +W G+VSWG+GCG +G YT+V ++WI++
Sbjct: 770 EPSGRWFLAGLVSWGLGCGRPNFFGVYTRVTRVINWIQQ 808
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 65,369,210
Number of extensions: 1888294
Number of successful extensions: 8173
Number of sequences better than 1.0e-05: 192
Number of HSP's gapped: 7561
Number of HSP's successfully gapped: 397
Length of query: 639
Length of database: 15,617,559
Length adjustment: 108
Effective length of query: 531
Effective length of database: 12,373,671
Effective search space: 6570419301
Effective search space used: 6570419301
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007298
(1917 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_003126565.2| PREDICTED: LOW QUALITY PROTEIN: complement C... 1141 0.0
Alignment gi|NP_001171876.1| mannan-binding lectin serine protease 1 [Sus... 437 e-132
Alignment gi|NP_001157120.1| mannan-binding lectin serine protease 2 [Sus... 395 e-110
Alignment gi|NP_001005349.1| complement C1s subcomponent precursor [Sus s... 353 1e-97
Alignment gi|XP_003126570.2| PREDICTED: LOW QUALITY PROTEIN: complement C... 224 1e-58
Alignment gi|NP_999165.1| haptoglobin precursor [Sus scrofa]. 144 7e-40
Alignment gi|XP_003361800.1| PREDICTED: haptoglobin-like [Sus scrofa]. 144 1e-38
Alignment gi|XP_003361612.1| PREDICTED: mannan-binding lectin serine prot... 152 6e-37
Alignment gi|NP_001157475.1| coagulation factor IX [Sus scrofa]. 108 5e-29
Alignment gi|XP_003355405.1| PREDICTED: transmembrane protease serine 6-l... 105 7e-29
>ref|XP_003126565.2| PREDICTED: LOW QUALITY PROTEIN: complement C1r subcomponent [Sus
scrofa].
Length = 749
Score = 1141 bits (2952), Expect = 0.0
Identities = 534/549 (97%), Positives = 537/549 (97%), Gaps = 2/549 (0%)
Frame = +3
Query: 3 NKMLLTFHTDFSNEENGTIMFYKGFLAYYQAVDLDECAFQHNSGEDNAQQPRCQHLCHNY 182
NKMLLTFHTDFSNEENGTIMFYKGFLAYYQAVDLDECAFQHNSGEDNAQQPRCQHLCHNY
Sbjct: 151 NKMLLTFHTDFSNEENGTIMFYKGFLAYYQAVDLDECAFQHNSGEDNAQQPRCQHLCHNY 210
Query: 183 IGGYFCSCHLGYELQEDGHSCQAECSRELFTEPSGYISSLEYPQPYPPDLRCNYSIRVER 362
IGGYFCSCHLGYELQEDGHSCQAECSRELFTEPSGYISSLEYPQPYPPDLRCNYSIRVE
Sbjct: 211 IGGYFCSCHLGYELQEDGHSCQAECSRELFTEPSGYISSLEYPQPYPPDLRCNYSIRVEW 270
Query: 363 GLTIHLKFLEPFEIDDHQQVHCPYDQLQIYASGRNIGEFCGSQRPAPIDTNSNAVDLLFF 542
GLTIHLKFLEPFEIDDHQQVHCPYDQLQ+YASGRNIGEFCGSQRPAPI VDLLFF
Sbjct: 271 GLTIHLKFLEPFEIDDHQQVHCPYDQLQVYASGRNIGEFCGSQRPAPIXXXXXXVDLLFF 330
Query: 543 TDESGDSRGWKLHYTTEIIKCPQPKTLDTFTVIQDLQPQYEFRDYFIASCKQGYQLMEGK 722
TDESGDSRGWKLHYTTEIIKCPQPKTLDTFTVIQDLQPQYEFRDYFIASCKQGYQLMEGK
Sbjct: 331 TDESGDSRGWKLHYTTEIIKCPQPKTLDTFTVIQDLQPQYEFRDYFIASCKQGYQLMEGK 390
Query: 723 QVLLSFTAVCQDDGTWHRAMPRCKIKDCGRPKSLPNGDFNYITTKGVNTYQARIQYYCRE 902
QVLLSFTAVCQDDGTWHRAMPRCKIKDCGRPKSLPNGDFNYITTKGVNTYQARIQYYCRE
Sbjct: 391 QVLLSFTAVCQDDGTWHRAMPRCKIKDCGRPKSLPNGDFNYITTKGVNTYQARIQYYCRE 450
Query: 903 PYYKMHTGGGSSKS--ERGAYTCSAQGVWMNELEGETMPRCLPVCGKPVNPVEEKQRIIG 1076
PYYKMHTGGGS++ GAYTCSAQGVWMNELEGETMPRCLPVCGKPVNPVEEKQRIIG
Sbjct: 451 PYYKMHTGGGSTQPPLPSGAYTCSAQGVWMNELEGETMPRCLPVCGKPVNPVEEKQRIIG 510
Query: 1077 GRKAKPGSFPWQAFTNIYGHGGGALLGDRWILTAAHTLKPKEYDEQNNASVDVFLGHVNV 1256
GRKAKPGSFPWQAFTNIYGHGGGALLGDRWILTAAHTLKPKEYDEQNNASVDVFLGHVNV
Sbjct: 511 GRKAKPGSFPWQAFTNIYGHGGGALLGDRWILTAAHTLKPKEYDEQNNASVDVFLGHVNV 570
Query: 1257 DEITKLGNHPVRRFIIHPDYRQEDSHSFEGDIALLELENSVTLGPDILPICLPDNDTFYD 1436
DEITKLGNHPVRRFIIHPDYRQEDSHSFEGDIALLELENSVTLGPDILPICLPDNDTFYD
Sbjct: 571 DEITKLGNHPVRRFIIHPDYRQEDSHSFEGDIALLELENSVTLGPDILPICLPDNDTFYD 630
Query: 1437 WGFMGYVSGFGITERKLSHDLRYVHLPIAKREMCQSWLQKKNRNDVFSRNMFCAGSPTLK 1616
WGFMGYVSGFGITERKLSHDLRYVHLPIAKREMCQSWLQKKNRNDVFSRNMFCAGSPTLK
Sbjct: 631 WGFMGYVSGFGITERKLSHDLRYVHLPIAKREMCQSWLQKKNRNDVFSRNMFCAGSPTLK 690
Query: 1617 QDSCQGDSG 1643
QDSCQGDSG
Sbjct: 691 QDSCQGDSG 699
Score = 113 bits (282), Expect = 4e-25
Identities = 51/55 (92%), Positives = 52/55 (94%)
Frame = +1
Query: 1630 RGTVEGVFAMKDEKNDQWVAMGIVSWGIGCGEGYGFYTKVLNYVDWIKKEMEKAG 1794
+G GVFAMKDEKNDQWVAMGIVSWGIGCGEGYGFYTKVLNYVDWIKKEMEKAG
Sbjct: 695 QGDSGGVFAMKDEKNDQWVAMGIVSWGIGCGEGYGFYTKVLNYVDWIKKEMEKAG 749
>ref|NP_001171876.1| mannan-binding lectin serine protease 1 [Sus scrofa].
Length = 728
Score = 437 bits (1125), Expect(2) = e-132
Identities = 233/573 (40%), Positives = 327/573 (57%), Gaps = 28/573 (4%)
Frame = +3
Query: 9 MLLTFHTDFSNEENGTIMFYKGFLAYYQAVDLDECAFQHNSGEDNAQQPRCQHLCHNYIG 188
M +TF +DFSNEE Y GF A+Y AVD+DEC E ++ C H CHNYIG
Sbjct: 114 MSITFRSDFSNEER-----YTGFDAHYMAVDVDECT------EREDEELSCDHYCHNYIG 162
Query: 189 GYFCSCHLGYELQEDGHSCQAECSRELFTEPSGYISSLEYPQPYPPDLRCNYSIRVERGL 368
GY+CSC GY L D +C+ ECS LFT+ +G I+S +YP PYP C Y+I +E G
Sbjct: 163 GYYCSCRFGYILHTDNRTCRVECSDNLFTQRTGVITSPDYPSPYPKSSECLYTIELEEGF 222
Query: 369 TIHLKFLEPFEIDDHQQVHCPYDQLQIYASGRNIGEFCGSQRPAPIDTNSNAVDLLFFTD 548
+ L+F + F+I+DH +V CPYD ++I A + +G FCG + P PI+T S+++ + F +D
Sbjct: 223 MVSLQFEDIFDIEDHPEVSCPYDYIKIKAGPKLLGPFCGEKAPEPINTQSHSIQIQFRSD 282
Query: 549 ESGDSRGWKLHYTTEIIKCPQPKTLDTFTVIQDLQPQYEFRDYFIASCKQGYQLMEGKQV 728
SG++RGW+L Y +CP+ + I+ LQ +Y F+D + SC GY++++
Sbjct: 283 NSGENRGWRLLYRATGNECPKLQP-PVHGKIEPLQAKYSFKDQVLISCDTGYKVLKDNVE 341
Query: 729 LLSFTAVCQDDGTWHRAMPRCKIKDCGRPKSLPNGDFNYITTKGVNTYQARIQYYCREPY 908
+ F C DGTW +P CKI DCG P L NG + T + TY++ I Y C++PY
Sbjct: 342 MDVFQIECLKDGTWSNKIPTCKIADCGTPAKLENGLVTFSTRNNLTTYKSEIIYSCQQPY 401
Query: 909 YKMHTGGGSSKSERGAYTCSAQGVWMNELEGETMPRCLPVCGKPVNPVEE-KQRIIGGRK 1085
YKM S G YTCSAQGVWMNE+ G++ P CLPVCG+P + +RIIGGR
Sbjct: 402 YKM------LHSTTGVYTCSAQGVWMNEVLGKSQPTCLPVCGQPSRSLPNLVKRIIGGRN 455
Query: 1086 AKPGSFPWQAF---------TNIYGHGGGALLGDRWILTAAHTLKPKEYDEQ----NNAS 1226
A+PG FPWQA N G GALL + WILTAAH L+ + D +
Sbjct: 456 AEPGLFPWQALIVVEDTSRVPNDKWFGSGALLSESWILTAAHVLRSQRRDNTVTPVSKEH 515
Query: 1227 VDVFLGHVNVDEITKLGNHPVRRFIIHPDYRQEDSHSFEGDIALLELENSVTLGPDILPI 1406
V V+LG +V + + N R ++HPD+ D ++ DIAL++L+ V LGP ++P+
Sbjct: 516 VTVYLGLHDVRDKSGAVNSSAARVVLHPDF---DIQNYNHDIALVQLQEPVPLGPHVMPV 572
Query: 1407 CLPDNDTFYDWGFM-GYVSGFGITE-------------RKLSHDLRYVHLPIAKREMCQS 1544
CLP + M G V+G+GI+ R LS L+YV LP+ C++
Sbjct: 573 CLPRPEPEGPAPHMLGLVAGWGISNPNVTVDEIISSGTRTLSDVLQYVKLPVVPHAECKT 632
Query: 1545 WLQKKNRNDVFSRNMFCAGSPTLKQDSCQGDSG 1643
+ ++ N + NMFCAG +D+C GDSG
Sbjct: 633 SYESRSGNYSVTENMFCAGYYEGGKDTCLGDSG 665
Score = 55.1 bits (131), Expect(2) = e-132
Identities = 25/54 (46%), Positives = 34/54 (62%), Gaps = 4/54 (7%)
Frame = +1
Query: 1633 GTVEGVFAMKDEKNDQWVAMGIVSWG----IGCGEGYGFYTKVLNYVDWIKKEM 1782
G G F + D+ + +WVA G+VSWG G + YG YTKV NYVDW+ ++M
Sbjct: 662 GDSGGAFVILDDLSQRWVAQGLVSWGGPEECGSKQVYGVYTKVSNYVDWVWEQM 715
>ref|NP_001157120.1| mannan-binding lectin serine protease 2 [Sus scrofa].
Length = 685
Score = 395 bits (1015), Expect = e-110
Identities = 217/554 (39%), Positives = 308/554 (55%), Gaps = 8/554 (1%)
Frame = +3
Query: 15 LTFHTDFSNEENGTIMFYKGFLAYYQAVDLDECAFQHNSGEDNAQQPRCQHLCHNYIGGY 194
+TF +D+SNE+ T GF A+Y A D+DEC Q GE P C H CHN++GG+
Sbjct: 115 VTFCSDYSNEKPFT-----GFEAFYSAEDIDEC--QVPPGE----APACDHHCHNHLGGF 163
Query: 195 FCSCHLGYELQEDGHSCQAECSRELFTEPSGYISSLEYPQPYPPDLRCNYSIRVERGLTI 374
+CSC GY L + H+C A CS ++FT SG +SS EYPQPYP C YSIR+E G ++
Sbjct: 164 YCSCRAGYVLHRNKHTCSALCSGQVFTARSGVLSSPEYPQPYPKLSNCTYSIRLEEGFSV 223
Query: 375 HLKFLEPFEIDDHQQVHCPYDQLQIYASGRNIGEFCGSQRPAPIDTNSNAVDLLFFTDES 554
L F+E F+++ H + CPYD L+I G FCG P I+T S+ V + F TD+S
Sbjct: 224 SLDFVESFDVESHPETQCPYDSLEIQTDKEKYGPFCGRTLPPRIETKSSTVTVTFVTDQS 283
Query: 555 GDSRGWKLHYTTEIIKCPQPKTLDTFTVIQDLQPQYEFRDYFIASCKQGYQLMEGKQVLL 734
G+ GW++ Y++ CP P I +Q +Y +D F C+ GY+L++G L
Sbjct: 284 GEHTGWRIRYSSTAQPCPDP-VAPPNGHISPVQAKYILKDRFFVFCETGYELLQGDLPLK 342
Query: 735 SFTAVCQDDGTWHRAMPRCKIKDCGRPKSLPNGDFNYITTKGVNTYQARIQYYCREPYYK 914
SFT VCQ DG+W + MP C I DCG P L NG YIT V TY+A ++Y C Y
Sbjct: 343 SFTTVCQKDGSWDQPMPECSIVDCGPPDDLQNGQVEYITAPEVTTYKAEMRYRCNAFY-- 400
Query: 915 MHTGGGSSKSERGAYTCSAQGVWMNELEGETMPRCLPVCGKPVNPVEEKQRIIGGRKAKP 1094
+ + + G Y C A G WM +++P C PVCG E RI GG+KAK
Sbjct: 401 ------TMRIDHGKYVCEADGFWMRSKGDKSLPVCEPVCGLSTRTTE--GRIYGGQKAKL 452
Query: 1095 GSFPWQAFTNIYGHGGGALLGDRWILTAAHTLKPKEYDEQNNASVDVFLGHVNVDEITKL 1274
G FPWQ GAL+ D WILTAAH + ++ D +S+D+ LG + +L
Sbjct: 453 GDFPWQVLLFGETMAAGALVSDDWILTAAHAVYKQKEDA---SSLDIRLG-----VLKRL 504
Query: 1275 GNHPVRRF----IIHPDYRQEDSHSFEGDIALLELENSVTLGPDILPICLP--DNDTFYD 1436
H + + IH Y + ++ DIAL++L++ V + +++PICLP + ++F
Sbjct: 505 SPHYTQAWAEAIFIHEGYTH--NAGYDNDIALIKLKDKVVINSNVMPICLPRKEAESFMR 562
Query: 1437 WGFMGYVSGFGITERK-LSHDLRYVHLPIAKREMCQSWLQKKNRNDV-FSRNMFCAGSPT 1610
+G SG+G+T+R L+ +L LPI + C + +KK+ V + NM CAG +
Sbjct: 563 TNDIGTASGWGLTQRGFLARNLMSADLPIVDHQKCVAAFEKKSDPGVRVTDNMLCAGLES 622
Query: 1611 LKQDSCQGDSGRGL 1652
+DSC+GDSG L
Sbjct: 623 GGKDSCKGDSGGAL 636
>ref|NP_001005349.1| complement C1s subcomponent precursor [Sus scrofa].
Length = 687
Score = 353 bits (907), Expect = 1e-97
Identities = 209/562 (37%), Positives = 299/562 (53%), Gaps = 15/562 (2%)
Frame = +3
Query: 3 NKMLLTFHTDFSNEENGTIMFYKGFLAYYQAVDLDECAFQHNSGEDNAQQPRCQHLCHNY 182
NK+ + F +DFSNEE T GF AYY AVD++EC D A P C H C+NY
Sbjct: 104 NKLQVIFTSDFSNEERFT-----GFAAYYVAVDVNECT-------DFADSP-CSHFCNNY 150
Query: 183 IGGYFCSCHLGYELQEDGHSCQAECSRELFTEPSGYISSLEYPQPYPPDLRCNYSIRVER 362
IGGYFCSC Y L ED +C CS ++FT G ++S YP PYP + RC+Y I +E
Sbjct: 151 IGGYFCSCPPEYFLHEDKKNCGVNCSGDVFTTLIGEVASPNYPNPYPENSRCDYQILLEE 210
Query: 363 GLTIHLKF-LEPFEIDDHQQ-VHCPYDQLQIYASGRNIGEFCGSQRPAP--IDTNSNAVD 530
G + + E F+++ HCP D L A + G +CG+ P P I+T SNA++
Sbjct: 211 GFQVVVTMRREDFDVEPADSGGHCP-DSLIFVAGNQQFGPYCGNGFPGPLTIETKSNALN 269
Query: 531 LLFFTDESGDSRGWKLHYTTEIIKCPQPKTLDTFTVIQDLQPQYEFRDYFIASCKQGYQL 710
++F TDE+ +GWK Y + I CP+ T ++F + + +Y F+D +C G+++
Sbjct: 270 IIFQTDETEQKKGWKFRYHGDPIPCPKEVTANSFW--EPEKAKYVFKDVVKITCLDGFEV 327
Query: 711 MEGKQVLLSFTAVCQDDGTWHRAMPRCKIKDCGRPKSLPNGDFNYITTKGVNTYQARIQY 890
++G SF + CQ +G W + RC+ DCG P+ +P+G + + + +Y
Sbjct: 328 VQGTVGSTSFYSTCQSNGKWSNSKLRCQPVDCGSPEPIPHGK---VEDPEHTLFGSVTRY 384
Query: 891 YCREPYYKMHTGGGSSKSERGAYTCSAQGVWMNELEGETMPRCLPVCGKPVNPVEEKQRI 1070
C +PYY M T G Y C+ G W+NEL G +P+C+PVCG P P + QRI
Sbjct: 385 SCEQPYYYMETDGSEE------YRCAGNGSWVNELLGAELPKCVPVCGIPSEPFKGMQRI 438
Query: 1071 IGGRKAKPGSFPWQAFTNIYGHGGGALLGDRWILTAAHTLKPKEYDEQNNASVDVFLGHV 1250
GG K SFPWQ F GGAL+ ++W+LTAAH ++ S V H+
Sbjct: 439 FGGIITKIESFPWQVFFQ-NPRAGGALIDEQWVLTAAHVVEGNREPVMYVGSSSVVTSHL 497
Query: 1251 NVDEITKLGNHPVRRFIIHPDYRQEDS---HSFEGDIALLELENSVTLGPDILPICLPDN 1421
++ R IHP + ++D+ +F+ DIAL+ L++ V +GP + PICLP
Sbjct: 498 ANGQML-----TAERVFIHPGWEEQDASERKNFDNDIALVRLKDPVKMGPTVSPICLPGT 552
Query: 1422 DTFYD--WGFMGYVSGFGITERKLSH--DLRYVHLPIAKREMCQSWLQKKNR----NDVF 1577
+ YD G +G +SG+G T K H LR LP+A + CQ R + VF
Sbjct: 553 SSDYDPSVGDLGLISGWGRTNTK-DHVVKLRGAKLPVAPSDKCQEIKGTNPRIGTSSFVF 611
Query: 1578 SRNMFCAGSPTLKQDSCQGDSG 1643
+ NM CAG + DSC GDSG
Sbjct: 612 TDNMICAGGRGV--DSCNGDSG 631
Score = 53.9 bits (128), Expect = 3e-07
Identities = 30/83 (36%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
Frame = +1
Query: 1546 GSRKKIGTMCFRGTCSVLGPQL*SRIPARGTVEGVFAMK--DEKNDQWVAMGIVSWGIGC 1719
G+ +IGT F T +++ G G FAM+ +E+ ++ G+VSWG C
Sbjct: 599 GTNPRIGTSSFVFTDNMICAGGRGVDSCNGDSGGAFAMQVPNEETPKFYVAGLVSWGPQC 658
Query: 1720 GEGYGFYTKVLNYVDWIKKEMEK 1788
G YG YT+V NY+DWI++ M++
Sbjct: 659 GT-YGIYTRVKNYIDWIRETMQQ 680
Score = 51.6 bits (122), Expect = 2e-06
Identities = 35/110 (31%), Positives = 52/110 (47%), Gaps = 10/110 (9%)
Frame = +3
Query: 285 GYISSLEYPQPYPPDLRCNYSIRVERGLTIHLKFLEPFEIDDHQQVHCPYDQLQIYASGR 464
G I S YPQ YP ++ ++ I V G IHL F +D +C YD +QI + GR
Sbjct: 21 GEILSPNYPQAYPNEVEKSWDIEVPEGYGIHLYFT---HLDIELSENCAYDSVQIKSGGR 77
Query: 465 NIGEFCG---SQRP-----APIDTNSNAVDLLFFTDESGDSR--GWKLHY 584
G+ CG S+ P N + ++F +D S + R G+ +Y
Sbjct: 78 EEGKLCGQKTSKNPKSAVVEEFQVPYNKLQVIFTSDFSNEERFTGFAAYY 127
>ref|XP_003126570.2| PREDICTED: LOW QUALITY PROTEIN: complement C1r subcomponent-like
protein [Sus scrofa].
Length = 419
Score = 224 bits (572), Expect = 1e-58
Identities = 120/273 (43%), Positives = 158/273 (57%)
Frame = +3
Query: 810 RPKSLPNGDFNYITTKGVNTYQARIQYYCREPYYKMHTGGGSSKSERGAYTCSAQGVWMN 989
+P S +G I T N A+ Q +C+EPYY+ G A TC+ Q W
Sbjct: 162 QPISQASGGPEAINTPEGNP--AKAQSHCKEPYYQPMAAG--------ALTCTTQVPWKQ 211
Query: 990 ELEGETMPRCLPVCGKPVNPVEEKQRIIGGRKAKPGSFPWQAFTNIYGHGGGALLGDRWI 1169
E E +P C+PVCG+PV P+ + + +G KA GSFPWQAFT+IYG GGGALLGDRWI
Sbjct: 212 TQEKEVVPGCVPVCGRPVTPIAQNREPLGASKAALGSFPWQAFTSIYGRGGGALLGDRWI 271
Query: 1170 LTAAHTLKPKEYDEQNNASVDVFLGHVNVDEITKLGNHPVRRFIIHPDYRQEDSHSFEGD 1349
LTAAHT+ PK+ S +VFLGH ++DE F GD
Sbjct: 272 LTAAHTIYPKDGXLGRGRSAEVFLGHTDIDE-----------------------XXFHGD 308
Query: 1350 IALLELENSVTLGPDILPICLPDNDTFYDWGFMGYVSGFGITERKLSHDLRYVHLPIAKR 1529
IALLEL++ V LGP +LP+CLPD + Y G + YVSG G+ L+ +L+Y LP+A R
Sbjct: 309 IALLELQHRVPLGPSLLPVCLPDREALYRPG-LXYVSGLGVEMGWLTTELKYSRLPVAPR 367
Query: 1530 EMCQSWLQKKNRNDVFSRNMFCAGSPTLKQDSC 1628
C++WL++K R +VFS MFCAG ++Q C
Sbjct: 368 AACEAWLREKGRTEVFSAGMFCAGD-RMRQQIC 399
>ref|NP_999165.1| haptoglobin precursor [Sus scrofa].
Length = 347
Score = 144 bits (362), Expect(2) = 7e-40
Identities = 93/301 (30%), Positives = 146/301 (48%), Gaps = 21/301 (6%)
Frame = +3
Query: 804 CGRPKSLPNGDFNYITTKGVNTYQARIQYYCREPYYKMHTGGGSSKSERGAYTCSAQGVW 983
C +P +P G ++ ++Y+C + YYK+ T G G YT + W
Sbjct: 33 CPKPPEIPKGYVEHM-----------VRYHC-QTYYKLRTAGD------GVYTLDSNKQW 74
Query: 984 MNELEGETMPRCLPVCGKPVNPVEEKQRIIGGRKAKPGSFPWQAFTNIYGH----GGGAL 1151
N++ GE +P C VCGKP NPV++ QRI+GG GSFPWQA + H G L
Sbjct: 75 TNKVTGEKLPECEAVCGKPKNPVDQVQRIMGGSLDAKGSFPWQA--KMISHHNLTSGATL 132
Query: 1152 LGDRWILTAAHTLKPKEYDEQNNASV----DVFLGHVNVDEITKLGNHPVRRFIIHPDYR 1319
+ ++W+LT A L+ ++ + +++G EI K+ I HPD
Sbjct: 133 INEQWLLTTAKNLRLGHKNDTKAKDIAPTLRLYVGKKQEVEIEKV--------IFHPD-- 182
Query: 1320 QEDSHSFEGDIALLELENSVTLGPDILPICLPDNDTFYDWGFMGYVSGFGITER-KLSHD 1496
+ DI L++L+ V + ++PICLP D + + G +GYVSG+G +
Sbjct: 183 -----NSTVDIGLIKLKQKVPVNERVMPICLPSKD-YVNVGLVGYVSGWGRNANLNFTEH 236
Query: 1497 LRYVHLPIAKREMCQSWL------QKKNRND------VFSRNMFCAGSPTLKQDSCQGDS 1640
L+YV LP+A +E C + +KK + + + FCAG ++D+C GD+
Sbjct: 237 LKYVMLPVADQEKCVQYYEGSTVPEKKTPKSPVGVQPILNEHTFCAGLSKYQEDTCYGDA 296
Query: 1641 G 1643
G
Sbjct: 297 G 297
Score = 39.7 bits (91), Expect(2) = 7e-40
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +1
Query: 1633 GTVEGVFAMKDEKNDQWVAMGIVSWGIGCGEG-YGFYTKVLNYVDWIK 1773
G FA+ D+ +D W A GI+S+ C YG Y +V + +DWI+
Sbjct: 294 GDAGSAFAVHDKDDDTWYAAGILSFDKSCRTAEYGVYVRVTSILDWIQ 341
>ref|XP_003361800.1| PREDICTED: haptoglobin-like [Sus scrofa].
Length = 386
Score = 144 bits (362), Expect(2) = 1e-38
Identities = 93/301 (30%), Positives = 146/301 (48%), Gaps = 21/301 (6%)
Frame = +3
Query: 804 CGRPKSLPNGDFNYITTKGVNTYQARIQYYCREPYYKMHTGGGSSKSERGAYTCSAQGVW 983
C +P +P G ++ ++Y+C + YYK+ T G G YT + W
Sbjct: 72 CPKPPEIPKGYVEHM-----------VRYHC-QTYYKLRTAGD------GVYTLDSNKQW 113
Query: 984 MNELEGETMPRCLPVCGKPVNPVEEKQRIIGGRKAKPGSFPWQAFTNIYGH----GGGAL 1151
N++ GE +P C VCGKP NPV++ QRI+GG GSFPWQA + H G L
Sbjct: 114 TNKVTGEKLPECEAVCGKPKNPVDQVQRIMGGSLDAKGSFPWQA--KMISHHNLTSGATL 171
Query: 1152 LGDRWILTAAHTLKPKEYDEQNNASV----DVFLGHVNVDEITKLGNHPVRRFIIHPDYR 1319
+ ++W+LT A L+ ++ + +++G EI K+ I HPD
Sbjct: 172 INEQWLLTTAKNLRLGHKNDTKAKDIAPTLRLYVGKKQEVEIEKV--------IFHPD-- 221
Query: 1320 QEDSHSFEGDIALLELENSVTLGPDILPICLPDNDTFYDWGFMGYVSGFGITER-KLSHD 1496
+ DI L++L+ V + ++PICLP D + + G +GYVSG+G +
Sbjct: 222 -----NSTVDIGLIKLKQKVPVNERVMPICLPSKD-YVNVGLVGYVSGWGRNANLNFTEH 275
Query: 1497 LRYVHLPIAKREMCQSWL------QKKNRND------VFSRNMFCAGSPTLKQDSCQGDS 1640
L+YV LP+A +E C + +KK + + + FCAG ++D+C GD+
Sbjct: 276 LKYVMLPVADQEKCVQYYEGSTVPEKKTPKSPVGVQPILNEHTFCAGLSKYQEDTCYGDA 335
Query: 1641 G 1643
G
Sbjct: 336 G 336
Score = 35.4 bits (80), Expect(2) = 1e-38
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +1
Query: 1633 GTVEGVFAMKDEKNDQWVAMGIVSWGIGCGEG-YGFYTKVLNYVDWIK 1773
G FA+ D+ +D W A GI+S YG Y +V + +DWI+
Sbjct: 333 GDAGSAFAVHDKDDDTWYAAGILSXXXXXXXXEYGVYVRVTSILDWIQ 380
>ref|XP_003361612.1| PREDICTED: mannan-binding lectin serine protease 1-like [Sus
scrofa].
Length = 264
Score = 152 bits (384), Expect = 6e-37
Identities = 69/147 (46%), Positives = 93/147 (63%)
Frame = +3
Query: 9 MLLTFHTDFSNEENGTIMFYKGFLAYYQAVDLDECAFQHNSGEDNAQQPRCQHLCHNYIG 188
M +TF +DFSNEE Y GF A+Y AVD+DEC E ++ C H CHNYIG
Sbjct: 114 MSITFRSDFSNEER-----YTGFDAHYMAVDVDECT------EREDEELSCDHYCHNYIG 162
Query: 189 GYFCSCHLGYELQEDGHSCQAECSRELFTEPSGYISSLEYPQPYPPDLRCNYSIRVERGL 368
GY+CSC GY L D +C+ ECS LFT+ +G I+S +YP PYP C Y+I +E G
Sbjct: 163 GYYCSCRFGYILHTDNRTCRVECSDNLFTQRTGVITSPDYPSPYPKSSECLYTIELEEGF 222
Query: 369 TIHLKFLEPFEIDDHQQVHCPYDQLQI 449
+ L+F + F+I+DH +V CPYD +++
Sbjct: 223 MVSLQFEDIFDIEDHPEVSCPYDYIKV 249
>ref|NP_001157475.1| coagulation factor IX [Sus scrofa].
Length = 462
Score = 108 bits (271), Expect(2) = 5e-29
Identities = 72/201 (35%), Positives = 104/201 (51%), Gaps = 8/201 (3%)
Frame = +3
Query: 1065 RIIGGRKAKPGSFPWQAFTN--IYGHGGGALLGDRWILTAAHTLKPKEYDEQNNASVDVF 1238
RI+GG AKPG FPWQ N I GG+++ ++W++TAAH ++P + V
Sbjct: 227 RIVGGENAKPGQFPWQVLLNGKIDAFCGGSIINEKWVVTAAHCIEP-------GVKITVV 279
Query: 1239 LGHVNVDEITKL-GNHPVRRFIIHPDYRQEDSHSFEGDIALLELENSVTLGPDILPICLP 1415
G N +E V R I H Y + + DIALLEL+ +TL + PIC+
Sbjct: 280 AGEYNTEETEPTEQRRNVIRAIPHHSY-NATVNKYSHDIALLELDEPLTLNSYVTPICIA 338
Query: 1416 DND---TFYDWGFMGYVSGFG--ITERKLSHDLRYVHLPIAKREMCQSWLQKKNRNDVFS 1580
D + F +G GYVSG+G + + L+Y+ +P+ R C + + ++S
Sbjct: 339 DKEYTNIFLKFG-SGYVSGWGRVFNRGRSATILQYLKVPLVDRATC----LRSTKFTIYS 393
Query: 1581 RNMFCAGSPTLKQDSCQGDSG 1643
NMFCAG +DSCQGDSG
Sbjct: 394 -NMFCAGFHEGGKDSCQGDSG 413
Score = 38.1 bits (87), Expect(2) = 5e-29
Identities = 17/31 (54%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
Frame = +1
Query: 1693 GIVSWGIGCGEG--YGFYTKVLNYVDWIKKE 1779
GI+SWG C YG YTKV YV+WIK++
Sbjct: 428 GIISWGEECAVKGKYGIYTKVSRYVNWIKEK 458
>ref|XP_003355405.1| PREDICTED: transmembrane protease serine 6-like [Sus scrofa].
Length = 509
Score = 105 bits (261), Expect(2) = 7e-29
Identities = 72/205 (35%), Positives = 109/205 (53%), Gaps = 6/205 (2%)
Frame = +3
Query: 1065 RIIGGRKAKPGSFPWQAFTNIYGHG--GGALLGDRWILTAAHTLKPKEYDEQNNASVDVF 1238
RI+GG + G +PWQA + G GGAL+ DRW++TAAH + E + A V+
Sbjct: 274 RIVGGAVSSEGEWPWQASLQVRGRHICGGALIADRWVITAAHCFQ--EDSMASPALWTVY 331
Query: 1239 LGHV-NVDEITKLGNHPVRRFIIHPDYRQEDSHSFEGDIALLELENSVTLGPDILPICLP 1415
LG V + V R ++HP Y +EDSH + D+ALL+L++ V + P+CLP
Sbjct: 332 LGKVWQSSRWPGEVSFKVSRLLLHP-YHEEDSHDY--DVALLQLDHPVVRSAAVHPVCLP 388
Query: 1416 DNDTFYDWGFMGYVSGFGITER--KLSHDLRYVHLPIAKREMCQSWLQKKNRNDVFSRNM 1589
F++ G +++G+G S+ L+ V + + +++C + R V R M
Sbjct: 389 ARSHFFEPGLHCWITGWGALREGGPTSNGLQKVDVQLIPQDLC----SEAYRYQVTPR-M 443
Query: 1590 FCAGSPTLKQDSCQGDSGRGL-CNE 1661
CAG K+D+CQGDSG L C E
Sbjct: 444 LCAGYRRGKKDACQGDSGGPLVCKE 468
Score = 41.6 bits (96), Expect(2) = 7e-29
Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Frame = +1
Query: 1666 EKNDQWVAMGIVSWGIGCGEG--YGFYTKVLNYVDWIKK 1776
E + +W G+VSWG+GCG +G YT++ + WI++
Sbjct: 468 EPSGRWFLAGLVSWGLGCGRPNYFGVYTRITGVIGWIQQ 506
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 48,671,207
Number of extensions: 1439621
Number of successful extensions: 6416
Number of sequences better than 1.0e-05: 117
Number of HSP's gapped: 6044
Number of HSP's successfully gapped: 224
Length of query: 639
Length of database: 11,343,932
Length adjustment: 105
Effective length of query: 534
Effective length of database: 8,729,747
Effective search space: 4661684898
Effective search space used: 4661684898
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007298
(1917 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|GL894246.2| Sus scrofa unplaced genomic scaffold ChrUScaf2130 1631 0.0
>gb|GL894246.2| Sus scrofa unplaced genomic scaffold ChrUScaf2130
Length = 79281
Score = 1631 bits (823), Expect = 0.0
Identities = 867/883 (98%), Gaps = 1/883 (0%)
Strand = Plus / Minus
Query: 1023 ccagtgtgcgggaaaccggtcaaccctgtggaagagaagcagcgcatcatcggaggcagg 1082
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8735 ccagtgtgcgggaaaccggtcaaccctgtggaagagaagcagcgcatcatcggaggcagg 8676
Query: 1083 aaggccaagccgggcagtttcccctggcaggccttcaccaacatctacgggcacgggggc 1142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8675 aaggccaagccgggcagtttcccctggcaggccttcaccaacatctacgggcacgggggc 8616
Query: 1143 ggcgcgctgctgggcgaccgctggatcctcacggccgcgcacacgctcaagcccaaggag 1202
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 8615 ggcgcgctgctgggcgaccgctggatcctcacggctgcgcacacgctcaagcccaaggag 8556
Query: 1203 tacgatgagcagaacaacgcctccgtggacgtgttcctgggccacgtgaacgtggacgag 1262
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 8555 tacgatgagcagaacaacgcctccgtggacgtgttcctgggccacgtgaatgtggacgag 8496
Query: 1263 atcaccaagctgggcaaccacccggtgcgccggttcatcatccacccagactaccgccag 1322
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8495 atcaccaagctgggcaaccacccggtgcgccggttcatcatccacccagactaccgccag 8436
Query: 1323 gaagacagccacagcttcgagggggatatcgccctcctggagctggaaaacagcgtcacc 1382
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 8435 gaagacagccacagcttcgagggggacatcgccctcctggagctggaaaacagcgtcacc 8376
Query: 1383 ctgggccccgacatcctccctatctgcctccccgacaacgacaccttctacgactggggc 1442
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 8375 ctgggccccgacatcctccctatctgcctccctgacaacgacaccttctacgactggggc 8316
Query: 1443 ttcatgggctacgtcagtggctttgggataacagagaggaaactgtctcatgacctcagg 1502
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8315 ttcatgggctacgtcagtggctttgggataacagagaggaaactgtctcatgacctcagg 8256
Query: 1503 tatgtccatctgcccatagcgaaacgagagatgtgccagagctggctccagnnnnnnnnt 1562
|||||||||||||||||||| |||||||||||||||||||||||||||||| |
Sbjct: 8255 tatgtccatctgcccatagctaaacgagagatgtgccagagctggctccagaaaaaaaat 8196
Query: 1563 aggaacgatgtgttttcgcggaacatgttctgtgctgggtccccaactctaaagcaggat 1622
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 8195 aggaacgatgtgttttcgcggaacatgttctgtgctgggtccccgactctaaagcaggat 8136
Query: 1623 tcctgccagggggacagtggaaggggtctttgcaatgaaggatgagaaaaatgaccagtg 1682
||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 8135 tcctgccagggggacagcgg-aggggtctttgcaatgaaggatgagaaaaatgaccagtg 8077
Query: 1683 ggtggccatgggcattgtgtcctggggcatcggctgtggcgagggctacggcttctacac 1742
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8076 ggtggccatgggcattgtgtcctggggcatcggctgtggcgagggctacggcttctacac 8017
Query: 1743 caaagtgctcaactacgtcgactggatcaaaaaggagatggagaaggcgggctgaaccca 1802
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8016 caaagtgctcaactacgtcgactggatcaaaaaggagatggagaaggcgggctgaaccca 7957
Query: 1803 gaactcgctaggtcagaatccagagagtagagtgtttaataaaaaattatctgaccagtt 1862
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7956 gaactcgctaggtcagaatccagagagtagagtgtttaataaaaaattatctgaccagtt 7897
Query: 1863 gttggtaaccactaagaatccatattaaaaatcactgatgcag 1905
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7896 gttggtaaccactaagaatccatattaaaaatcactgatgcag 7854
Score = 325 bits (164), Expect = 5e-86
Identities = 190/200 (95%), Gaps = 2/200 (1%)
Strand = Plus / Minus
Query: 249 gccgagtgcagcagggagctgttcacagagccttcaggctacatctccagcctggagtac 308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15174 gccgagtgcagcagggagctgttcacagagccttcaggctacatctccagcctggagtac 15115
Query: 309 ccccagccctannnnnnngacctgcgctgcaactacagcatc--cgggtggagcggggtc 366
||||||||||| |||||||||||||||||||||||| ||||||||| ||||||
Sbjct: 15114 ccccagccctacccccccgacctgcgctgcaactacagcatcnccgggtggagtggggtc 15055
Query: 367 tcaccatccacctcaagttcctggaacccttcgaaatcgatgaccaccagcaagtacact 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15054 tcaccatccacctcaagttcctggaacccttcgaaatcgatgaccaccagcaagtacact 14995
Query: 427 gtccctacgaccagctacag 446
||||||||||||||||||||
Sbjct: 14994 gtccctacgaccagctacag 14975
Score = 299 bits (151), Expect = 3e-78
Identities = 151/151 (100%)
Strand = Plus / Minus
Query: 99 gacctggatgaatgtgcttttcagcacaactcaggggaggacaatgcccagcagccccgg 158
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15497 gacctggatgaatgtgcttttcagcacaactcaggggaggacaatgcccagcagccccgg 15438
Query: 159 tgccagcacctgtgtcacaactacatcggcggctatttctgctcctgccacctaggctat 218
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15437 tgccagcacctgtgtcacaactacatcggcggctatttctgctcctgccacctaggctat 15378
Query: 219 gagcttcaggaggatgggcattcctgccagg 249
|||||||||||||||||||||||||||||||
Sbjct: 15377 gagcttcaggaggatgggcattcctgccagg 15347
Score = 278 bits (140), Expect = 1e-71
Identities = 143/144 (99%)
Strand = Plus / Minus
Query: 796 tcaaggactgtgggcggcccaaaagcctgcccaatggggacttcaattacatcaccacaa 855
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11368 tcaaggactgtgggcggcccaaaagcctgcccaatggggacttcaattacatcaccacaa 11309
Query: 856 agggggtgaacacctaccaggcccgtatccagtactactgccgagagccgtattacaaaa 915
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 11308 agggggtgaacacctaccaggcccgtatccagtactactgccgagagccgtattacaaga 11249
Query: 916 tgcacaccggagggggcagcagca 939
||||||||||||||||||||||||
Sbjct: 11248 tgcacaccggagggggcagcagca 11225
Score = 244 bits (123), Expect = 2e-61
Identities = 123/123 (100%)
Strand = Plus / Minus
Query: 595 tcatcaagtgcccccagcccaagactctagacacattcaccgtcatccaggacctgcagc 654
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14267 tcatcaagtgcccccagcccaagactctagacacattcaccgtcatccaggacctgcagc 14208
Query: 655 ctcagtacgagttccgggactatttcatcgcctcctgcaaacaaggctaccagctcatgg 714
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14207 ctcagtacgagttccgggactatttcatcgcctcctgcaaacaaggctaccagctcatgg 14148
Query: 715 agg 717
|||
Sbjct: 14147 agg 14145
Score = 196 bits (99), Expect = 3e-47
Identities = 99/99 (100%)
Strand = Plus / Minus
Query: 1 ggaacaagatgctgctgacctttcacacagatttctccaacgaggagaatggtaccatca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16010 ggaacaagatgctgctgacctttcacacagatttctccaacgaggagaatggtaccatca 15951
Query: 61 tgttttacaagggcttcctcgcctactaccaagctgtgg 99
|||||||||||||||||||||||||||||||||||||||
Sbjct: 15950 tgttttacaagggcttcctcgcctactaccaagctgtgg 15912
Score = 161 bits (81), Expect = 2e-36
Identities = 81/81 (100%)
Strand = Plus / Minus
Query: 715 aggggaagcaggtgctactgtccttcacagctgtctgccaggatgatggcacgtggcatc 774
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11857 aggggaagcaggtgctactgtccttcacagctgtctgccaggatgatggcacgtggcatc 11798
Query: 775 gcgccatgcccaggtgcaaga 795
|||||||||||||||||||||
Sbjct: 11797 gcgccatgcccaggtgcaaga 11777
Score = 153 bits (77), Expect = 4e-34
Identities = 77/77 (100%)
Strand = Plus / Minus
Query: 950 aggggcgtatacctgctcagcccagggcgtttggatgaatgagctggaaggagagacgat 1009
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9526 aggggcgtatacctgctcagcccagggcgtttggatgaatgagctggaaggagagacgat 9467
Query: 1010 gcctcggtgtttgccag 1026
|||||||||||||||||
Sbjct: 9466 gcctcggtgtttgccag 9450
Score = 139 bits (70), Expect = 6e-30
Identities = 70/70 (100%)
Strand = Plus / Minus
Query: 525 gtggatctgctcttcttcacagacgagtcaggggacagccggggctggaagctgcactac 584
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14442 gtggatctgctcttcttcacagacgagtcaggggacagccggggctggaagctgcactac 14383
Query: 585 accacggaaa 594
||||||||||
Sbjct: 14382 accacggaaa 14373
Score = 113 bits (57), Expect = 4e-22
Identities = 57/57 (100%)
Strand = Plus / Minus
Query: 450 tatgccagcgggaggaacatcggggagttctgtgggagtcagaggccggcgcccatt 506
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14599 tatgccagcgggaggaacatcggggagttctgtgggagtcagaggccggcgcccatt 14543
Score = 97.6 bits (49), Expect = 2e-17
Identities = 82/93 (88%)
Strand = Plus / Minus
Query: 1094 gggcagtttcccctggcaggccttcaccaacatctacgggcacgggggcggcgcgctgct 1153
|||||| |||||||||||||||||||||| ||||||||| | |||||||| || |||||
Sbjct: 24005 gggcagcttcccctggcaggccttcaccagcatctacggccgtgggggcggggccctgct 23946
Query: 1154 gggcgaccgctggatcctcacggccgcgcacac 1186
||||||| | ||||||||||| ||||| |||||
Sbjct: 23945 gggcgacaggtggatcctcaccgccgcccacac 23913
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 50,165,149
Number of extensions: 263
Number of successful extensions: 263
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 260
Number of HSP's successfully gapped: 12
Length of query: 1917
Length of database: 2,808,509,378
Length adjustment: 22
Effective length of query: 1895
Effective length of database: 2,808,408,574
Effective search space: 5321934247730
Effective search space used: 5321934247730
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)