Animal-Genome cDNA 20110601C-007303

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-007303
         (1356 letters)

Database: RefSeq49_BP.fasta 
           33,088 sequences; 17,681,374 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001008663.1| keratin, type II cytoskeletal 5 [Bos taurus].     504   e-143
Alignment   gi|NP_001076979.1| keratin 6A [Bos taurus].                          459   e-129
Alignment   gi|XP_002687297.1| PREDICTED: keratin 6C isoform 2 [Bos taurus].     456   e-128
Alignment   gi|XP_002687296.1| PREDICTED: keratin 6C isoform 1 [Bos taurus].     456   e-128
Alignment   gi|XP_872255.1| PREDICTED: keratin 6C isoform 2 [Bos taurus].        456   e-128
Alignment   gi|XP_884760.1| PREDICTED: keratin 6C isoform 3 [Bos taurus].        456   e-128
Alignment   gi|XP_002687295.1| PREDICTED: cytokeratin type II, component IV...   456   e-128
Alignment   gi|XP_002687294.1| PREDICTED: cytokeratin type II, component IV...   456   e-128
Alignment   gi|XP_001789677.1| PREDICTED: keratin 6A-like [Bos taurus].          456   e-128
Alignment   gi|XP_869322.1| PREDICTED: cytokeratin type II, component IV is...   456   e-128

>ref|NP_001008663.1| keratin, type II cytoskeletal 5 [Bos taurus].
          Length = 601

 Score =  504 bits (1298), Expect = e-143
 Identities = 258/265 (97%), Positives = 264/265 (99%)
 Frame = +1

Query: 4    ILGERGRLDSELRSMQDLVEDFKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEAK 183
            I+GERGRLDSELR+MQDLVEDFKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEAK
Sbjct: 234  IVGERGRLDSELRNMQDLVEDFKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEAK 293

Query: 184  VDALMDEINFTKMFFEAELSQMQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIANR 363
            VDALMDEINF KMFF+AELSQMQTHVSDTSVVLSMDNNR+LDLDSIIAEVKAQYEDIANR
Sbjct: 294  VDALMDEINFMKMFFDAELSQMQTHVSDTSVVLSMDNNRSLDLDSIIAEVKAQYEDIANR 353

Query: 364  SRTEAESWYQTKYEELQQTAGRHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQN 543
            SRTEAESWYQTKYEELQQTAGRHGDDLRNTKHEISEMNRMIQRLR+EIDNVKKQCANLQN
Sbjct: 354  SRTEAESWYQTKYEELQQTAGRHGDDLRNTKHEISEMNRMIQRLRSEIDNVKKQCANLQN 413

Query: 544  AIADAEQRGELALKDARNKLAELEDALQKAKQDMARLLREYQELMNTKLALDVEIATYRK 723
            AIADAEQRGELALKDAR+KLAELEDALQKAKQDMARLLREYQELMNTKLALDVEIATYRK
Sbjct: 414  AIADAEQRGELALKDARSKLAELEDALQKAKQDMARLLREYQELMNTKLALDVEIATYRK 473

Query: 724  LLEGEECRLSGEGVGPVNISVVTNT 798
            LLEGEECRLSGEGVGPVNISVVTNT
Sbjct: 474  LLEGEECRLSGEGVGPVNISVVTNT 498


>ref|NP_001076979.1| keratin 6A [Bos taurus].
          Length = 571

 Score =  459 bits (1180), Expect = e-129
 Identities = 234/266 (87%), Positives = 252/266 (94%)
 Frame = +1

Query: 1    SILGERGRLDSELRSMQDLVEDFKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEA 180
            SILGERGRLDSELR MQD VEDFKNKYEDEINKRT AENEFV LKKDVDAAYMNKVEL+A
Sbjct: 227  SILGERGRLDSELRGMQDTVEDFKNKYEDEINKRTVAENEFVNLKKDVDAAYMNKVELQA 286

Query: 181  KVDALMDEINFTKMFFEAELSQMQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIAN 360
            KVDAL DEINF + F++AEL+QMQTH+SDTSVVLSMDNNRNLDLDSIIAEVKAQYE+IA 
Sbjct: 287  KVDALTDEINFLRTFYDAELAQMQTHISDTSVVLSMDNNRNLDLDSIIAEVKAQYEEIAQ 346

Query: 361  RSRTEAESWYQTKYEELQQTAGRHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQ 540
            RSR EAESWYQ+KYEELQ TAGRHGDDLRNTK EISE+NR+IQRLR+EID+VKKQCA+LQ
Sbjct: 347  RSRAEAESWYQSKYEELQVTAGRHGDDLRNTKQEISEINRVIQRLRSEIDHVKKQCASLQ 406

Query: 541  NAIADAEQRGELALKDARNKLAELEDALQKAKQDMARLLREYQELMNTKLALDVEIATYR 720
            +AIADAEQRGELALKDAR+KLA+LEDALQKAKQDMARLL+EYQELMN KLALDVEIATYR
Sbjct: 407  SAIADAEQRGELALKDARSKLADLEDALQKAKQDMARLLKEYQELMNVKLALDVEIATYR 466

Query: 721  KLLEGEECRLSGEGVGPVNISVVTNT 798
            KLLEGEECRLSGEGVG VNISVV +T
Sbjct: 467  KLLEGEECRLSGEGVGQVNISVVQST 492


>ref|XP_002687297.1| PREDICTED: keratin 6C isoform 2 [Bos taurus].
          Length = 549

 Score =  456 bits (1173), Expect = e-128
 Identities = 233/266 (87%), Positives = 250/266 (93%)
 Frame = +1

Query: 1    SILGERGRLDSELRSMQDLVEDFKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEA 180
            SILGERGRLDSELR MQD VEDFKNKYEDEINKRT AENEFV LKKDVD AYMNKVEL+A
Sbjct: 205  SILGERGRLDSELRGMQDTVEDFKNKYEDEINKRTAAENEFVKLKKDVDIAYMNKVELQA 264

Query: 181  KVDALMDEINFTKMFFEAELSQMQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIAN 360
            KVDAL DEINF + F++AEL+QMQTH+SDTSVVLSMDNNRNLDLDSIIAEVKAQYE+IA 
Sbjct: 265  KVDALTDEINFLRTFYDAELAQMQTHISDTSVVLSMDNNRNLDLDSIIAEVKAQYEEIAQ 324

Query: 361  RSRTEAESWYQTKYEELQQTAGRHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQ 540
            RSR EAESWYQ+KYEEL+ TAGRHGDDLRNTK EISE+NR+IQRLR+EID+VKKQCA+LQ
Sbjct: 325  RSRAEAESWYQSKYEELRVTAGRHGDDLRNTKQEISEINRVIQRLRSEIDHVKKQCASLQ 384

Query: 541  NAIADAEQRGELALKDARNKLAELEDALQKAKQDMARLLREYQELMNTKLALDVEIATYR 720
            +AIADAEQRGELALKDARNKLA LEDALQKAKQDMARLL+EYQELMN KLALDVEIATYR
Sbjct: 385  SAIADAEQRGELALKDARNKLAGLEDALQKAKQDMARLLKEYQELMNVKLALDVEIATYR 444

Query: 721  KLLEGEECRLSGEGVGPVNISVVTNT 798
            KLLEGEECRLSGEGVG VNISVV +T
Sbjct: 445  KLLEGEECRLSGEGVGQVNISVVQST 470


>ref|XP_002687296.1| PREDICTED: keratin 6C isoform 1 [Bos taurus].
          Length = 571

 Score =  456 bits (1173), Expect = e-128
 Identities = 233/266 (87%), Positives = 250/266 (93%)
 Frame = +1

Query: 1    SILGERGRLDSELRSMQDLVEDFKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEA 180
            SILGERGRLDSELR MQD VEDFKNKYEDEINKRT AENEFV LKKDVD AYMNKVEL+A
Sbjct: 227  SILGERGRLDSELRGMQDTVEDFKNKYEDEINKRTAAENEFVKLKKDVDIAYMNKVELQA 286

Query: 181  KVDALMDEINFTKMFFEAELSQMQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIAN 360
            KVDAL DEINF + F++AEL+QMQTH+SDTSVVLSMDNNRNLDLDSIIAEVKAQYE+IA 
Sbjct: 287  KVDALTDEINFLRTFYDAELAQMQTHISDTSVVLSMDNNRNLDLDSIIAEVKAQYEEIAQ 346

Query: 361  RSRTEAESWYQTKYEELQQTAGRHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQ 540
            RSR EAESWYQ+KYEEL+ TAGRHGDDLRNTK EISE+NR+IQRLR+EID+VKKQCA+LQ
Sbjct: 347  RSRAEAESWYQSKYEELRVTAGRHGDDLRNTKQEISEINRVIQRLRSEIDHVKKQCASLQ 406

Query: 541  NAIADAEQRGELALKDARNKLAELEDALQKAKQDMARLLREYQELMNTKLALDVEIATYR 720
            +AIADAEQRGELALKDARNKLA LEDALQKAKQDMARLL+EYQELMN KLALDVEIATYR
Sbjct: 407  SAIADAEQRGELALKDARNKLAGLEDALQKAKQDMARLLKEYQELMNVKLALDVEIATYR 466

Query: 721  KLLEGEECRLSGEGVGPVNISVVTNT 798
            KLLEGEECRLSGEGVG VNISVV +T
Sbjct: 467  KLLEGEECRLSGEGVGQVNISVVQST 492


>ref|XP_872255.1| PREDICTED: keratin 6C isoform 2 [Bos taurus].
          Length = 549

 Score =  456 bits (1173), Expect = e-128
 Identities = 233/266 (87%), Positives = 250/266 (93%)
 Frame = +1

Query: 1    SILGERGRLDSELRSMQDLVEDFKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEA 180
            SILGERGRLDSELR MQD VEDFKNKYEDEINKRT AENEFV LKKDVD AYMNKVEL+A
Sbjct: 205  SILGERGRLDSELRGMQDTVEDFKNKYEDEINKRTAAENEFVKLKKDVDIAYMNKVELQA 264

Query: 181  KVDALMDEINFTKMFFEAELSQMQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIAN 360
            KVDAL DEINF + F++AEL+QMQTH+SDTSVVLSMDNNRNLDLDSIIAEVKAQYE+IA 
Sbjct: 265  KVDALTDEINFLRTFYDAELAQMQTHISDTSVVLSMDNNRNLDLDSIIAEVKAQYEEIAQ 324

Query: 361  RSRTEAESWYQTKYEELQQTAGRHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQ 540
            RSR EAESWYQ+KYEEL+ TAGRHGDDLRNTK EISE+NR+IQRLR+EID+VKKQCA+LQ
Sbjct: 325  RSRAEAESWYQSKYEELRVTAGRHGDDLRNTKQEISEINRVIQRLRSEIDHVKKQCASLQ 384

Query: 541  NAIADAEQRGELALKDARNKLAELEDALQKAKQDMARLLREYQELMNTKLALDVEIATYR 720
            +AIADAEQRGELALKDARNKLA LEDALQKAKQDMARLL+EYQELMN KLALDVEIATYR
Sbjct: 385  SAIADAEQRGELALKDARNKLAGLEDALQKAKQDMARLLKEYQELMNVKLALDVEIATYR 444

Query: 721  KLLEGEECRLSGEGVGPVNISVVTNT 798
            KLLEGEECRLSGEGVG VNISVV +T
Sbjct: 445  KLLEGEECRLSGEGVGQVNISVVQST 470


>ref|XP_884760.1| PREDICTED: keratin 6C isoform 3 [Bos taurus].
          Length = 571

 Score =  456 bits (1173), Expect = e-128
 Identities = 233/266 (87%), Positives = 250/266 (93%)
 Frame = +1

Query: 1    SILGERGRLDSELRSMQDLVEDFKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEA 180
            SILGERGRLDSELR MQD VEDFKNKYEDEINKRT AENEFV LKKDVD AYMNKVEL+A
Sbjct: 227  SILGERGRLDSELRGMQDTVEDFKNKYEDEINKRTAAENEFVKLKKDVDIAYMNKVELQA 286

Query: 181  KVDALMDEINFTKMFFEAELSQMQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIAN 360
            KVDAL DEINF + F++AEL+QMQTH+SDTSVVLSMDNNRNLDLDSIIAEVKAQYE+IA 
Sbjct: 287  KVDALTDEINFLRTFYDAELAQMQTHISDTSVVLSMDNNRNLDLDSIIAEVKAQYEEIAQ 346

Query: 361  RSRTEAESWYQTKYEELQQTAGRHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQ 540
            RSR EAESWYQ+KYEEL+ TAGRHGDDLRNTK EISE+NR+IQRLR+EID+VKKQCA+LQ
Sbjct: 347  RSRAEAESWYQSKYEELRVTAGRHGDDLRNTKQEISEINRVIQRLRSEIDHVKKQCASLQ 406

Query: 541  NAIADAEQRGELALKDARNKLAELEDALQKAKQDMARLLREYQELMNTKLALDVEIATYR 720
            +AIADAEQRGELALKDARNKLA LEDALQKAKQDMARLL+EYQELMN KLALDVEIATYR
Sbjct: 407  SAIADAEQRGELALKDARNKLAGLEDALQKAKQDMARLLKEYQELMNVKLALDVEIATYR 466

Query: 721  KLLEGEECRLSGEGVGPVNISVVTNT 798
            KLLEGEECRLSGEGVG VNISVV +T
Sbjct: 467  KLLEGEECRLSGEGVGQVNISVVQST 492


>ref|XP_002687295.1| PREDICTED: cytokeratin type II, component IV isoform 2 [Bos taurus].
          Length = 549

 Score =  456 bits (1172), Expect = e-128
 Identities = 232/266 (87%), Positives = 251/266 (94%)
 Frame = +1

Query: 1    SILGERGRLDSELRSMQDLVEDFKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEA 180
            SILGERGRLDSELR MQD VEDFKNKYEDEINKRT AENEFV LKKDVD AYMNKVEL+A
Sbjct: 205  SILGERGRLDSELRGMQDTVEDFKNKYEDEINKRTAAENEFVKLKKDVDIAYMNKVELQA 264

Query: 181  KVDALMDEINFTKMFFEAELSQMQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIAN 360
            KVDAL DEINF + F++AEL+QMQTH+SDTSVVLSMDNNRNLDLDSIIAEVKAQYE+IA 
Sbjct: 265  KVDALTDEINFLRTFYDAELAQMQTHISDTSVVLSMDNNRNLDLDSIIAEVKAQYEEIAQ 324

Query: 361  RSRTEAESWYQTKYEELQQTAGRHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQ 540
            RSR EAESWYQ+KYEEL+ TAGRHGDDLRNTK EISE+NR+IQRLR+EID+VKKQCA+LQ
Sbjct: 325  RSRAEAESWYQSKYEELRVTAGRHGDDLRNTKQEISEINRVIQRLRSEIDHVKKQCASLQ 384

Query: 541  NAIADAEQRGELALKDARNKLAELEDALQKAKQDMARLLREYQELMNTKLALDVEIATYR 720
            +AIADAEQRGELALKDAR+KLA+LEDALQKAKQDMARLL+EYQELMN KLALDVEIATYR
Sbjct: 385  SAIADAEQRGELALKDARSKLADLEDALQKAKQDMARLLKEYQELMNVKLALDVEIATYR 444

Query: 721  KLLEGEECRLSGEGVGPVNISVVTNT 798
            KLLEGEECRLSGEGVG VNISVV +T
Sbjct: 445  KLLEGEECRLSGEGVGQVNISVVQST 470


>ref|XP_002687294.1| PREDICTED: cytokeratin type II, component IV isoform 1 [Bos taurus].
          Length = 571

 Score =  456 bits (1172), Expect = e-128
 Identities = 232/266 (87%), Positives = 251/266 (94%)
 Frame = +1

Query: 1    SILGERGRLDSELRSMQDLVEDFKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEA 180
            SILGERGRLDSELR MQD VEDFKNKYEDEINKRT AENEFV LKKDVD AYMNKVEL+A
Sbjct: 227  SILGERGRLDSELRGMQDTVEDFKNKYEDEINKRTAAENEFVKLKKDVDIAYMNKVELQA 286

Query: 181  KVDALMDEINFTKMFFEAELSQMQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIAN 360
            KVDAL DEINF + F++AEL+QMQTH+SDTSVVLSMDNNRNLDLDSIIAEVKAQYE+IA 
Sbjct: 287  KVDALTDEINFLRTFYDAELAQMQTHISDTSVVLSMDNNRNLDLDSIIAEVKAQYEEIAQ 346

Query: 361  RSRTEAESWYQTKYEELQQTAGRHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQ 540
            RSR EAESWYQ+KYEEL+ TAGRHGDDLRNTK EISE+NR+IQRLR+EID+VKKQCA+LQ
Sbjct: 347  RSRAEAESWYQSKYEELRVTAGRHGDDLRNTKQEISEINRVIQRLRSEIDHVKKQCASLQ 406

Query: 541  NAIADAEQRGELALKDARNKLAELEDALQKAKQDMARLLREYQELMNTKLALDVEIATYR 720
            +AIADAEQRGELALKDAR+KLA+LEDALQKAKQDMARLL+EYQELMN KLALDVEIATYR
Sbjct: 407  SAIADAEQRGELALKDARSKLADLEDALQKAKQDMARLLKEYQELMNVKLALDVEIATYR 466

Query: 721  KLLEGEECRLSGEGVGPVNISVVTNT 798
            KLLEGEECRLSGEGVG VNISVV +T
Sbjct: 467  KLLEGEECRLSGEGVGQVNISVVQST 492


>ref|XP_001789677.1| PREDICTED: keratin 6A-like [Bos taurus].
          Length = 480

 Score =  456 bits (1172), Expect = e-128
 Identities = 232/266 (87%), Positives = 251/266 (94%)
 Frame = +1

Query: 1   SILGERGRLDSELRSMQDLVEDFKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEA 180
           SILGERGRLDSELR MQD VEDFKNKYEDEINKRT AENEFV LKKDVD AYMNKVEL+A
Sbjct: 136 SILGERGRLDSELRGMQDTVEDFKNKYEDEINKRTAAENEFVKLKKDVDIAYMNKVELQA 195

Query: 181 KVDALMDEINFTKMFFEAELSQMQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIAN 360
           KVDAL DEINF + F++AEL+QMQTH+SDTSVVLSMDNNRNLDLDSIIAEVKAQYE+IA 
Sbjct: 196 KVDALTDEINFLRTFYDAELAQMQTHISDTSVVLSMDNNRNLDLDSIIAEVKAQYEEIAQ 255

Query: 361 RSRTEAESWYQTKYEELQQTAGRHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQ 540
           RSR EAESWYQ+KYEEL+ TAGRHGDDLRNTK EISE+NR+IQRLR+EID+VKKQCA+LQ
Sbjct: 256 RSRAEAESWYQSKYEELRVTAGRHGDDLRNTKQEISEINRVIQRLRSEIDHVKKQCASLQ 315

Query: 541 NAIADAEQRGELALKDARNKLAELEDALQKAKQDMARLLREYQELMNTKLALDVEIATYR 720
           +AIADAEQRGELALKDAR+KLA+LEDALQKAKQDMARLL+EYQELMN KLALDVEIATYR
Sbjct: 316 SAIADAEQRGELALKDARSKLADLEDALQKAKQDMARLLKEYQELMNVKLALDVEIATYR 375

Query: 721 KLLEGEECRLSGEGVGPVNISVVTNT 798
           KLLEGEECRLSGEGVG VNISVV +T
Sbjct: 376 KLLEGEECRLSGEGVGQVNISVVQST 401


>ref|XP_869322.1| PREDICTED: cytokeratin type II, component IV isoform 3 [Bos taurus].
          Length = 549

 Score =  456 bits (1172), Expect = e-128
 Identities = 232/266 (87%), Positives = 251/266 (94%)
 Frame = +1

Query: 1    SILGERGRLDSELRSMQDLVEDFKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEA 180
            SILGERGRLDSELR MQD VEDFKNKYEDEINKRT AENEFV LKKDVD AYMNKVEL+A
Sbjct: 205  SILGERGRLDSELRGMQDTVEDFKNKYEDEINKRTAAENEFVKLKKDVDIAYMNKVELQA 264

Query: 181  KVDALMDEINFTKMFFEAELSQMQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIAN 360
            KVDAL DEINF + F++AEL+QMQTH+SDTSVVLSMDNNRNLDLDSIIAEVKAQYE+IA 
Sbjct: 265  KVDALTDEINFLRTFYDAELAQMQTHISDTSVVLSMDNNRNLDLDSIIAEVKAQYEEIAQ 324

Query: 361  RSRTEAESWYQTKYEELQQTAGRHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQ 540
            RSR EAESWYQ+KYEEL+ TAGRHGDDLRNTK EISE+NR+IQRLR+EID+VKKQCA+LQ
Sbjct: 325  RSRAEAESWYQSKYEELRVTAGRHGDDLRNTKQEISEINRVIQRLRSEIDHVKKQCASLQ 384

Query: 541  NAIADAEQRGELALKDARNKLAELEDALQKAKQDMARLLREYQELMNTKLALDVEIATYR 720
            +AIADAEQRGELALKDAR+KLA+LEDALQKAKQDMARLL+EYQELMN KLALDVEIATYR
Sbjct: 385  SAIADAEQRGELALKDARSKLADLEDALQKAKQDMARLLKEYQELMNVKLALDVEIATYR 444

Query: 721  KLLEGEECRLSGEGVGPVNISVVTNT 798
            KLLEGEECRLSGEGVG VNISVV +T
Sbjct: 445  KLLEGEECRLSGEGVGQVNISVVQST 470


  Database: RefSeq49_BP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 17,681,374
  Number of sequences in database:  33,088
  
Lambda     K      H
   0.315    0.130    0.360 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 37,319,363
Number of extensions: 927998
Number of successful extensions: 6093
Number of sequences better than 1.0e-05: 120
Number of HSP's gapped: 5848
Number of HSP's successfully gapped: 120
Length of query: 452
Length of database: 17,681,374
Length adjustment: 106
Effective length of query: 346
Effective length of database: 14,174,046
Effective search space: 4904219916
Effective search space used: 4904219916
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 35 (18.1 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-007303
         (1356 letters)

Database: RefSeq49_CP.fasta 
           33,336 sequences; 18,874,504 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_860457.1| PREDICTED: similar to Keratin, type II cytoskel...   460   e-129
Alignment   gi|XP_850008.1| PREDICTED: similar to Keratin, type II cytoskel...   460   e-129
Alignment   gi|XP_543650.2| PREDICTED: similar to cytokeratin type II [Cani...   445   e-125
Alignment   gi|XP_534795.2| PREDICTED: similar to Keratin, type II cytoskel...   383   e-106
Alignment   gi|XP_543646.2| PREDICTED: similar to keratin protein K6irs [Ca...   383   e-106
Alignment   gi|XP_850012.1| PREDICTED: similar to keratin 6 irs3 [Canis fam...   383   e-106
Alignment   gi|NP_001003392.1| keratin, type II cytoskeletal 1 [Canis lupus...   376   e-104
Alignment   gi|XP_543641.2| PREDICTED: similar to keratin 6L [Canis familia...   370   e-102
Alignment   gi|NP_001014299.1| keratin, type II cytoskeletal 2 oral [Canis ...   368   e-102
Alignment   gi|NP_001183958.1| keratin 71 [Canis lupus familiaris].              367   e-101

>ref|XP_860457.1| PREDICTED: similar to Keratin, type II cytoskeletal 6A (Cytokeratin
            6A) (CK 6A) (K6a keratin) isoform 3 [Canis familiaris].
          Length = 559

 Score =  460 bits (1183), Expect = e-129
 Identities = 234/266 (87%), Positives = 252/266 (94%)
 Frame = +1

Query: 1    SILGERGRLDSELRSMQDLVEDFKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEA 180
            SILGERGRLDSELRSMQD VEDFKNKYE+EINKRT AENEFV LKKDVDAAYMNKVEL+A
Sbjct: 216  SILGERGRLDSELRSMQDTVEDFKNKYEEEINKRTAAENEFVTLKKDVDAAYMNKVELQA 275

Query: 181  KVDALMDEINFTKMFFEAELSQMQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIAN 360
            KVDAL DEINFT+  ++AELSQMQTH+SDTSVVLSMDNNRNLDLDSIIAEVKAQYE+IA 
Sbjct: 276  KVDALTDEINFTRALYDAELSQMQTHISDTSVVLSMDNNRNLDLDSIIAEVKAQYEEIAQ 335

Query: 361  RSRTEAESWYQTKYEELQQTAGRHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQ 540
            RSR EAESWYQ+KYEELQ +AGRHGDDLRNTK EI+E+NRMIQRLR+EID+VKKQC NLQ
Sbjct: 336  RSRAEAESWYQSKYEELQVSAGRHGDDLRNTKQEIAEINRMIQRLRSEIDHVKKQCTNLQ 395

Query: 541  NAIADAEQRGELALKDARNKLAELEDALQKAKQDMARLLREYQELMNTKLALDVEIATYR 720
            +AIADAEQRGE+ALKDA+NKLA LEDALQKAKQDMARLL+EYQELMNTKLALDVEIATYR
Sbjct: 396  SAIADAEQRGEMALKDAKNKLAGLEDALQKAKQDMARLLKEYQELMNTKLALDVEIATYR 455

Query: 721  KLLEGEECRLSGEGVGPVNISVVTNT 798
            KLLEGEECRLSGEGVG VNISVV +T
Sbjct: 456  KLLEGEECRLSGEGVGQVNISVVQST 481


>ref|XP_850008.1| PREDICTED: similar to Keratin, type II cytoskeletal 6A (Cytokeratin
            6A) (CK 6A) (K6a keratin) isoform 2 [Canis familiaris].
          Length = 570

 Score =  460 bits (1183), Expect = e-129
 Identities = 234/266 (87%), Positives = 252/266 (94%)
 Frame = +1

Query: 1    SILGERGRLDSELRSMQDLVEDFKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEA 180
            SILGERGRLDSELRSMQD VEDFKNKYE+EINKRT AENEFV LKKDVDAAYMNKVEL+A
Sbjct: 227  SILGERGRLDSELRSMQDTVEDFKNKYEEEINKRTAAENEFVTLKKDVDAAYMNKVELQA 286

Query: 181  KVDALMDEINFTKMFFEAELSQMQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIAN 360
            KVDAL DEINFT+  ++AELSQMQTH+SDTSVVLSMDNNRNLDLDSIIAEVKAQYE+IA 
Sbjct: 287  KVDALTDEINFTRALYDAELSQMQTHISDTSVVLSMDNNRNLDLDSIIAEVKAQYEEIAQ 346

Query: 361  RSRTEAESWYQTKYEELQQTAGRHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQ 540
            RSR EAESWYQ+KYEELQ +AGRHGDDLRNTK EI+E+NRMIQRLR+EID+VKKQC NLQ
Sbjct: 347  RSRAEAESWYQSKYEELQVSAGRHGDDLRNTKQEIAEINRMIQRLRSEIDHVKKQCTNLQ 406

Query: 541  NAIADAEQRGELALKDARNKLAELEDALQKAKQDMARLLREYQELMNTKLALDVEIATYR 720
            +AIADAEQRGE+ALKDA+NKLA LEDALQKAKQDMARLL+EYQELMNTKLALDVEIATYR
Sbjct: 407  SAIADAEQRGEMALKDAKNKLAGLEDALQKAKQDMARLLKEYQELMNTKLALDVEIATYR 466

Query: 721  KLLEGEECRLSGEGVGPVNISVVTNT 798
            KLLEGEECRLSGEGVG VNISVV +T
Sbjct: 467  KLLEGEECRLSGEGVGQVNISVVQST 492


>ref|XP_543650.2| PREDICTED: similar to cytokeratin type II [Canis familiaris].
          Length = 975

 Score =  445 bits (1144), Expect = e-125
 Identities = 227/262 (86%), Positives = 245/262 (93%)
 Frame = +1

Query: 1   SILGERGRLDSELRSMQDLVEDFKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEA 180
           S+  ERGRLD+ELR+MQD+VEDFK +YEDEINKRT AENEFV LKKDVD+AYMNKVELEA
Sbjct: 213 SVTTERGRLDAELRNMQDVVEDFKVRYEDEINKRTAAENEFVALKKDVDSAYMNKVELEA 272

Query: 181 KVDALMDEINFTKMFFEAELSQMQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIAN 360
           KV++L DEINF +M FEAELSQMQT VSDTSVVLSMDNNR+LDLDSIIAEVKAQYEDIAN
Sbjct: 273 KVNSLTDEINFLRMLFEAELSQMQTQVSDTSVVLSMDNNRSLDLDSIIAEVKAQYEDIAN 332

Query: 361 RSRTEAESWYQTKYEELQQTAGRHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQ 540
           RSR EAESWYQTKYEELQ TAGRHGDDLRNTK EISEMNR+IQRLRAEID++KKQC++LQ
Sbjct: 333 RSRAEAESWYQTKYEELQVTAGRHGDDLRNTKQEISEMNRVIQRLRAEIDSIKKQCSSLQ 392

Query: 541 NAIADAEQRGELALKDARNKLAELEDALQKAKQDMARLLREYQELMNTKLALDVEIATYR 720
            AIADAEQRGELALKDAR KL +LE+ALQKAKQDMARLLREYQELMN KLALDVEIATYR
Sbjct: 393 TAIADAEQRGELALKDARAKLVDLEEALQKAKQDMARLLREYQELMNVKLALDVEIATYR 452

Query: 721 KLLEGEECRLSGEGVGPVNISV 786
           KLLEGEECRLSGEGV PVNIS+
Sbjct: 453 KLLEGEECRLSGEGVSPVNISI 474



 Score =  441 bits (1133), Expect = e-123
 Identities = 219/263 (83%), Positives = 250/263 (95%)
 Frame = +1

Query: 10   GERGRLDSELRSMQDLVEDFKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEAKVD 189
            GER RL+SEL++MQD+VEDFKNKYE+EIN+RT AENEFV+LKKDVDAAYMNKVELEAKVD
Sbjct: 652  GERTRLESELKNMQDVVEDFKNKYEEEINRRTVAENEFVVLKKDVDAAYMNKVELEAKVD 711

Query: 190  ALMDEINFTKMFFEAELSQMQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIANRSR 369
            ALMDEINF + F++AEL+Q+Q  +S+TSVVLSMDNNR LDLDSII+EVKAQYEDIANRSR
Sbjct: 712  ALMDEINFLRAFYDAELAQLQAQISETSVVLSMDNNRKLDLDSIISEVKAQYEDIANRSR 771

Query: 370  TEAESWYQTKYEELQQTAGRHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQNAI 549
             EAESWYQTKYEELQ++AGRHGDDLR TK EISE+NR++QRLR+EIDN+KKQCA +Q+AI
Sbjct: 772  AEAESWYQTKYEELQRSAGRHGDDLRTTKMEISELNRVMQRLRSEIDNLKKQCATMQSAI 831

Query: 550  ADAEQRGELALKDARNKLAELEDALQKAKQDMARLLREYQELMNTKLALDVEIATYRKLL 729
            ADAEQRGELALKDA++KLAELEDALQKAKQDMAR LREYQELMN KLALD+EIATYRKLL
Sbjct: 832  ADAEQRGELALKDAKHKLAELEDALQKAKQDMARQLREYQELMNVKLALDIEIATYRKLL 891

Query: 730  EGEECRLSGEGVGPVNISVVTNT 798
            EGEECRL+GEGVGPVNISVV+++
Sbjct: 892  EGEECRLTGEGVGPVNISVVSSS 914


>ref|XP_534795.2| PREDICTED: similar to Keratin, type II cytoskeletal 7 (Cytokeratin
           7) (K7) (CK 7) (Sarcolectin) [Canis familiaris].
          Length = 468

 Score =  383 bits (983), Expect = e-106
 Identities = 194/260 (74%), Positives = 229/260 (88%)
 Frame = +1

Query: 19  GRLDSELRSMQDLVEDFKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEAKVDALM 198
           GRL+ ELR+MQD++EDFKNKYEDEIN+RT AENEFV+LKKDVDAAYM+KVELEAKV+AL 
Sbjct: 163 GRLEVELRNMQDVLEDFKNKYEDEINRRTAAENEFVVLKKDVDAAYMSKVELEAKVEALN 222

Query: 199 DEINFTKMFFEAELSQMQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIANRSRTEA 378
           DEINF K  +E EL+++Q+ +SDTSVVLSMDN+R+LDLD IIAEVKAQYE++ANRSR E 
Sbjct: 223 DEINFFKTLYETELAELQSQISDTSVVLSMDNSRSLDLDGIIAEVKAQYEEMANRSRAET 282

Query: 379 ESWYQTKYEELQQTAGRHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQNAIADA 558
           E+ YQ+K+E LQ  AG+HGDDLRNT++EI+EMNR IQRL+AEIDN+K Q   L+ AIA+A
Sbjct: 283 ETMYQSKFETLQAQAGKHGDDLRNTRNEIAEMNRAIQRLQAEIDNIKNQRTKLEAAIAEA 342

Query: 559 EQRGELALKDARNKLAELEDALQKAKQDMARLLREYQELMNTKLALDVEIATYRKLLEGE 738
           E+RGELALKDA  K  ELE ALQ+AKQDMAR LREYQELMN KLALD+EIATYRKLLEGE
Sbjct: 343 EERGELALKDAHAKQEELEAALQRAKQDMARQLREYQELMNVKLALDIEIATYRKLLEGE 402

Query: 739 ECRLSGEGVGPVNISVVTNT 798
           E RL+G+GVG VNISVV +T
Sbjct: 403 ESRLAGDGVGAVNISVVNST 422


>ref|XP_543646.2| PREDICTED: similar to keratin protein K6irs [Canis familiaris].
          Length = 523

 Score =  383 bits (983), Expect = e-106
 Identities = 194/263 (73%), Positives = 232/263 (88%)
 Frame = +1

Query: 10  GERGRLDSELRSMQDLVEDFKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEAKVD 189
           G+R RLDSELRSMQDLVED+K +YE EIN+RT AENEFV+LKKDVDAAYMNKVEL+AKVD
Sbjct: 204 GDRVRLDSELRSMQDLVEDYKKRYEVEINRRTAAENEFVVLKKDVDAAYMNKVELQAKVD 263

Query: 190 ALMDEINFTKMFFEAELSQMQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIANRSR 369
           +L DEI F K  +E E++QMQ+H+SD SV+LSMDN R+LDLDSII EV+AQYE+IA +S+
Sbjct: 264 SLTDEIKFFKCLYEGEIAQMQSHISDMSVILSMDNYRDLDLDSIIDEVRAQYEEIALKSK 323

Query: 370 TEAESWYQTKYEELQQTAGRHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQNAI 549
            EAE+ YQTK +ELQ TAGRHGDDL+ TK EISE+NR+IQR+R+EI NVKKQCANL+ AI
Sbjct: 324 AEAEALYQTKIQELQVTAGRHGDDLKLTKAEISELNRLIQRIRSEIGNVKKQCANLETAI 383

Query: 550 ADAEQRGELALKDARNKLAELEDALQKAKQDMARLLREYQELMNTKLALDVEIATYRKLL 729
           ADAEQRG+ ALKDAR KL ELE AL +AK+++ARLLREYQEL++TKLALD+EIATYRKLL
Sbjct: 384 ADAEQRGDCALKDARAKLDELEAALHQAKEELARLLREYQELLSTKLALDMEIATYRKLL 443

Query: 730 EGEECRLSGEGVGPVNISVVTNT 798
           EGEECR+SGE    V+ISV++NT
Sbjct: 444 EGEECRMSGEHPSSVSISVISNT 466


>ref|XP_850012.1| PREDICTED: similar to keratin 6 irs3 [Canis familiaris].
          Length = 599

 Score =  383 bits (983), Expect = e-106
 Identities = 189/266 (71%), Positives = 240/266 (90%)
 Frame = +1

Query: 1   SILGERGRLDSELRSMQDLVEDFKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEA 180
           ++ G+R RLDSELRSM+D+VED+K +YE+EINKRTTAENEFV+LKKDVDAAYM+KVEL+A
Sbjct: 196 TLSGDRVRLDSELRSMRDVVEDYKKRYEEEINKRTTAENEFVVLKKDVDAAYMSKVELQA 255

Query: 181 KVDALMDEINFTKMFFEAELSQMQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIAN 360
           KVDAL  EI F K  +E E++Q+Q+H+SDTSV+LSMDNNR+L+LDSIIAEV+AQYE+IA 
Sbjct: 256 KVDALDGEIKFFKCLYEGEIAQIQSHISDTSVILSMDNNRDLNLDSIIAEVRAQYEEIAL 315

Query: 361 RSRTEAESWYQTKYEELQQTAGRHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQ 540
           +S+ EAE+ YQTK++ELQ  AGRHGDDL++TK+EISE+ R+IQRLR+EI++VKKQC+NL+
Sbjct: 316 KSKAEAEALYQTKFQELQLAAGRHGDDLKHTKNEISELTRLIQRLRSEIESVKKQCSNLE 375

Query: 541 NAIADAEQRGELALKDARNKLAELEDALQKAKQDMARLLREYQELMNTKLALDVEIATYR 720
            AIADAEQRG+ ALKDAR KL ELE AL +AK+++AR+LREYQELM+TKL+LD+EIATYR
Sbjct: 376 TAIADAEQRGDCALKDARAKLDELEAALHQAKEELARMLREYQELMSTKLSLDIEIATYR 435

Query: 721 KLLEGEECRLSGEGVGPVNISVVTNT 798
           KLLEGEECR+SGE    V+ISV+++T
Sbjct: 436 KLLEGEECRMSGEYTNAVSISVISST 461


>ref|NP_001003392.1| keratin, type II cytoskeletal 1 [Canis lupus familiaris].
          Length = 619

 Score =  376 bits (965), Expect = e-104
 Identities = 189/261 (72%), Positives = 233/261 (89%)
 Frame = +1

Query: 13   ERGRLDSELRSMQDLVEDFKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEAKVDA 192
            ++ R+DSEL++MQDLVED++NKYEDEINKRT AENEFV +KKDVDAA+MNKV+L+AKVD 
Sbjct: 249  DQSRMDSELKNMQDLVEDYRNKYEDEINKRTNAENEFVTIKKDVDAAFMNKVDLQAKVDN 308

Query: 193  LMDEINFTKMFFEAELSQMQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIANRSRT 372
            L  EI+F    ++AELSQMQT +S+T+V+LSMDNNR+LDLDSII+EVKAQYE+IA +S+ 
Sbjct: 309  LQQEIDFLTTLYQAELSQMQTQISETNVILSMDNNRSLDLDSIISEVKAQYEEIAQKSKA 368

Query: 373  EAESWYQTKYEELQQTAGRHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQNAIA 552
            EAE+ YQTKYEELQ TAG+HGD+L++TK EISE+NR+ QRLR+EID+VKKQ + LQ +I+
Sbjct: 369  EAEALYQTKYEELQITAGKHGDNLKSTKMEISELNRVAQRLRSEIDSVKKQISALQQSIS 428

Query: 553  DAEQRGELALKDARNKLAELEDALQKAKQDMARLLREYQELMNTKLALDVEIATYRKLLE 732
            DAEQRGE ALKDA++KLAELEDALQKAK+DMARLLR+YQELMNTKLALD+EIATYR LLE
Sbjct: 429  DAEQRGENALKDAQSKLAELEDALQKAKEDMARLLRDYQELMNTKLALDMEIATYRTLLE 488

Query: 733  GEECRLSGEGVGPVNISVVTN 795
            GEE R+SGE    V++SV T+
Sbjct: 489  GEESRMSGECAPNVSVSVNTS 509


>ref|XP_543641.2| PREDICTED: similar to keratin 6L [Canis familiaris].
          Length = 535

 Score =  370 bits (950), Expect = e-102
 Identities = 184/266 (69%), Positives = 228/266 (85%)
 Frame = +1

Query: 1    SILGERGRLDSELRSMQDLVEDFKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEA 180
            ++  +RGRLDSELR++QD++EDFK+KYEDEINKRT AENEFV+LKKDVDAAYM++++L+ 
Sbjct: 208  NLQSDRGRLDSELRNVQDVLEDFKSKYEDEINKRTAAENEFVLLKKDVDAAYMSRMDLQG 267

Query: 181  KVDALMDEINFTKMFFEAELSQMQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIAN 360
            K   L +E++F    +E ELSQ+QTHVSDT+VVLSMDNNR+LDLDSIIAEVKAQYE IA 
Sbjct: 268  KASTLTEELDFLNHLYEMELSQVQTHVSDTNVVLSMDNNRSLDLDSIIAEVKAQYELIAQ 327

Query: 361  RSRTEAESWYQTKYEELQQTAGRHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQ 540
            RSR EAE+WYQTKYEELQ TAG+HGD+LR+TK+EI+E+ R +QRL+ E+D VKKQC  LQ
Sbjct: 328  RSRAEAEAWYQTKYEELQVTAGKHGDNLRDTKNEIAELTRTVQRLQGEVDAVKKQCQQLQ 387

Query: 541  NAIADAEQRGELALKDARNKLAELEDALQKAKQDMARLLREYQELMNTKLALDVEIATYR 720
             AIA+AEQRG++ALKDA+ KL +L+ AL +AK+D+ARLLR+YQ LMN KLALDVEIATYR
Sbjct: 388  TAIAEAEQRGDMALKDAQKKLGDLDMALHQAKEDLARLLRDYQALMNVKLALDVEIATYR 447

Query: 721  KLLEGEECRLSGEGVGPVNISVVTNT 798
            KLLE EE R+SGE    V+ISV  N+
Sbjct: 448  KLLESEESRMSGECPSAVSISVTGNS 473


>ref|NP_001014299.1| keratin, type II cytoskeletal 2 oral [Canis lupus familiaris].
          Length = 653

 Score =  368 bits (945), Expect = e-102
 Identities = 196/264 (74%), Positives = 219/264 (82%)
 Frame = +1

Query: 7    LGERGRLDSELRSMQDLVEDFKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEAKV 186
            LGERG L+ EL++MQDLVEDFK KYEDEINKR  AENEFV LKKDVD AYM K EL+AKV
Sbjct: 268  LGERGNLEGELKNMQDLVEDFKKKYEDEINKRNAAENEFVGLKKDVDVAYMTKTELQAKV 327

Query: 187  DALMDEINFTKMFFEAELSQMQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIANRS 366
            D+L DE+NF +  +E       +HVSDTSVVLSMDNNR LDLDSIIAEVKAQYE+IA RS
Sbjct: 328  DSLTDELNFLRTLYE------MSHVSDTSVVLSMDNNRCLDLDSIIAEVKAQYEEIAQRS 381

Query: 367  RTEAESWYQTKYEELQQTAGRHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQNA 546
            + EAE+ YQTK  ELQ TAGRHGDDL+NTK EI E+NRMIQRLRAEI+NVKKQ ANLQ A
Sbjct: 382  KAEAEALYQTKLGELQTTAGRHGDDLKNTKSEIMELNRMIQRLRAEIENVKKQNANLQAA 441

Query: 547  IADAEQRGELALKDARNKLAELEDALQKAKQDMARLLREYQELMNTKLALDVEIATYRKL 726
            IA+AEQRGE+ALKDA  KL  L+ ALQKAK D+ARLL+EYQELMN KLALDVEIATYRKL
Sbjct: 442  IAEAEQRGEMALKDANAKLQGLQTALQKAKDDLARLLKEYQELMNVKLALDVEIATYRKL 501

Query: 727  LEGEECRLSGEGVGPVNISVVTNT 798
            LEGEECR+SGE      +S VT+T
Sbjct: 502  LEGEECRMSGECHECSVVSNVTST 525


>ref|NP_001183958.1| keratin 71 [Canis lupus familiaris].
          Length = 525

 Score =  367 bits (943), Expect = e-101
 Identities = 180/266 (67%), Positives = 235/266 (88%)
 Frame = +1

Query: 1   SILGERGRLDSELRSMQDLVEDFKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEA 180
           ++ G+R RLDSELRS++D+VED+K +YE+EIN+RT AENEFV+LKKDVDAAY NKVEL+A
Sbjct: 196 TLSGDRVRLDSELRSVRDVVEDYKKRYEEEINRRTAAENEFVLLKKDVDAAYANKVELQA 255

Query: 181 KVDALMDEINFTKMFFEAELSQMQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIAN 360
           KVD++  EI F K  +EAE++Q+Q+H+SD SV+LSMDNNR+L+LDSII EV+AQYE+IA 
Sbjct: 256 KVDSMDQEIKFFKCLYEAEIAQIQSHISDMSVILSMDNNRDLNLDSIIDEVRAQYEEIAL 315

Query: 361 RSRTEAESWYQTKYEELQQTAGRHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQ 540
           +S+ EAE+ YQTK++ELQ  AGRHGDDL+NTK+EISE+ R+IQR+R+EI+NVKKQ +NL+
Sbjct: 316 KSKAEAEALYQTKFQELQLAAGRHGDDLKNTKNEISELTRLIQRIRSEIENVKKQASNLE 375

Query: 541 NAIADAEQRGELALKDARNKLAELEDALQKAKQDMARLLREYQELMNTKLALDVEIATYR 720
            AIADAEQRG+ ALKDAR KL ELE AL +AK+++AR+LREYQEL++ KLALD+EIATYR
Sbjct: 376 TAIADAEQRGDNALKDARAKLDELEAALHQAKEELARMLREYQELLSLKLALDMEIATYR 435

Query: 721 KLLEGEECRLSGEGVGPVNISVVTNT 798
           KLLE EECR+SGE   PV+IS+++++
Sbjct: 436 KLLESEECRMSGEFPSPVSISIISSS 461


  Database: RefSeq49_CP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,874,504
  Number of sequences in database:  33,336
  
Lambda     K      H
   0.315    0.130    0.360 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 38,945,968
Number of extensions: 950365
Number of successful extensions: 7036
Number of sequences better than 1.0e-05: 130
Number of HSP's gapped: 6606
Number of HSP's successfully gapped: 140
Length of query: 452
Length of database: 18,874,504
Length adjustment: 106
Effective length of query: 346
Effective length of database: 15,340,888
Effective search space: 5307947248
Effective search space used: 5307947248
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 36 (18.5 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-007303
         (1356 letters)

Database: RefSeq49_HP.fasta 
           32,964 sequences; 18,297,164 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_000415.2| keratin, type II cytoskeletal 5 [Homo sapiens].      504   e-143
Alignment   gi|NP_005545.1| keratin, type II cytoskeletal 6A [Homo sapiens].     452   e-127
Alignment   gi|NP_005546.2| keratin, type II cytoskeletal 6B [Homo sapiens].     449   e-126
Alignment   gi|NP_775109.2| keratin, type II cytoskeletal 6C [Homo sapiens].     448   e-126
Alignment   gi|NP_004684.2| keratin, type II cytoskeletal 75 [Homo sapiens].     444   e-125
Alignment   gi|NP_476429.2| keratin, type II cytoskeletal 3 [Homo sapiens].      400   e-111
Alignment   gi|NP_056932.2| keratin, type II cytoskeletal 2 oral [Homo sapi...   397   e-110
Alignment   gi|NP_005547.3| keratin, type II cytoskeletal 7 [Homo sapiens].      386   e-107
Alignment   gi|NP_002263.3| keratin, type II cytoskeletal 4 [Homo sapiens].      381   e-106
Alignment   gi|NP_778238.1| keratin, type II cytoskeletal 73 [Homo sapiens].     379   e-105

>ref|NP_000415.2| keratin, type II cytoskeletal 5 [Homo sapiens].
          Length = 590

 Score =  504 bits (1298), Expect = e-143
 Identities = 258/266 (96%), Positives = 265/266 (99%)
 Frame = +1

Query: 1    SILGERGRLDSELRSMQDLVEDFKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEA 180
            SI+GERGRLDSELR+MQDLVEDFKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEA
Sbjct: 232  SIVGERGRLDSELRNMQDLVEDFKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEA 291

Query: 181  KVDALMDEINFTKMFFEAELSQMQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIAN 360
            KVDALMDEINF KMFF+AELSQMQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYE+IAN
Sbjct: 292  KVDALMDEINFMKMFFDAELSQMQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEEIAN 351

Query: 361  RSRTEAESWYQTKYEELQQTAGRHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQ 540
            RSRTEAESWYQTKYEELQQTAGRHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQ
Sbjct: 352  RSRTEAESWYQTKYEELQQTAGRHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQ 411

Query: 541  NAIADAEQRGELALKDARNKLAELEDALQKAKQDMARLLREYQELMNTKLALDVEIATYR 720
            NAIADAEQRGELALKDARNKLAELE+ALQKAKQDMARLLREYQELMNTKLALDVEIATYR
Sbjct: 412  NAIADAEQRGELALKDARNKLAELEEALQKAKQDMARLLREYQELMNTKLALDVEIATYR 471

Query: 721  KLLEGEECRLSGEGVGPVNISVVTNT 798
            KLLEGEECRLSGEGVGPVNISVVT++
Sbjct: 472  KLLEGEECRLSGEGVGPVNISVVTSS 497


>ref|NP_005545.1| keratin, type II cytoskeletal 6A [Homo sapiens].
          Length = 564

 Score =  452 bits (1164), Expect = e-127
 Identities = 230/266 (86%), Positives = 247/266 (92%)
 Frame = +1

Query: 1    SILGERGRLDSELRSMQDLVEDFKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEA 180
            SI+GERGRLDSELR MQDLVEDFKNKYEDEINKRT AENEFV LKKDVDAAYMNKVEL+A
Sbjct: 227  SIVGERGRLDSELRGMQDLVEDFKNKYEDEINKRTAAENEFVTLKKDVDAAYMNKVELQA 286

Query: 181  KVDALMDEINFTKMFFEAELSQMQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIAN 360
            K D L DEINF +  ++AELSQMQTH+SDTSVVLSMDNNRNLDLDSIIAEVKAQYE+IA 
Sbjct: 287  KADTLTDEINFLRALYDAELSQMQTHISDTSVVLSMDNNRNLDLDSIIAEVKAQYEEIAQ 346

Query: 361  RSRTEAESWYQTKYEELQQTAGRHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQ 540
            RSR EAESWYQTKYEELQ TAGRHGDDLRNTK EI+E+NRMIQRLR+EID+VKKQCANLQ
Sbjct: 347  RSRAEAESWYQTKYEELQVTAGRHGDDLRNTKQEIAEINRMIQRLRSEIDHVKKQCANLQ 406

Query: 541  NAIADAEQRGELALKDARNKLAELEDALQKAKQDMARLLREYQELMNTKLALDVEIATYR 720
             AIADAEQRGE+ALKDA+NKL  LEDALQKAKQD+ARLL+EYQELMN KLALDVEIATYR
Sbjct: 407  AAIADAEQRGEMALKDAKNKLEGLEDALQKAKQDLARLLKEYQELMNVKLALDVEIATYR 466

Query: 721  KLLEGEECRLSGEGVGPVNISVVTNT 798
            KLLEGEECRL+GEGVG VNISVV +T
Sbjct: 467  KLLEGEECRLNGEGVGQVNISVVQST 492


>ref|NP_005546.2| keratin, type II cytoskeletal 6B [Homo sapiens].
          Length = 564

 Score =  449 bits (1155), Expect = e-126
 Identities = 228/266 (85%), Positives = 247/266 (92%)
 Frame = +1

Query: 1    SILGERGRLDSELRSMQDLVEDFKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEA 180
            +I+GERGRLDSELR+MQDLVED KNKYEDEINKRT AENEFV LKKDVDAAYMNKVEL+A
Sbjct: 227  NIVGERGRLDSELRNMQDLVEDLKNKYEDEINKRTAAENEFVTLKKDVDAAYMNKVELQA 286

Query: 181  KVDALMDEINFTKMFFEAELSQMQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIAN 360
            K D L DEINF +  ++AELSQMQTH+SDTSVVLSMDNNRNLDLDSIIAEVKAQYE+IA 
Sbjct: 287  KADTLTDEINFLRALYDAELSQMQTHISDTSVVLSMDNNRNLDLDSIIAEVKAQYEEIAQ 346

Query: 361  RSRTEAESWYQTKYEELQQTAGRHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQ 540
            RSR EAESWYQTKYEELQ TAGRHGDDLRNTK EI+E+NRMIQRLR+EID+VKKQCANLQ
Sbjct: 347  RSRAEAESWYQTKYEELQITAGRHGDDLRNTKQEIAEINRMIQRLRSEIDHVKKQCANLQ 406

Query: 541  NAIADAEQRGELALKDARNKLAELEDALQKAKQDMARLLREYQELMNTKLALDVEIATYR 720
             AIADAEQRGE+ALKDA+NKL  LEDALQKAKQD+ARLL+EYQELMN KLALDVEIATYR
Sbjct: 407  AAIADAEQRGEMALKDAKNKLEGLEDALQKAKQDLARLLKEYQELMNVKLALDVEIATYR 466

Query: 721  KLLEGEECRLSGEGVGPVNISVVTNT 798
            KLLEGEECRL+GEGVG VNISVV +T
Sbjct: 467  KLLEGEECRLNGEGVGQVNISVVQST 492


>ref|NP_775109.2| keratin, type II cytoskeletal 6C [Homo sapiens].
          Length = 564

 Score =  448 bits (1153), Expect = e-126
 Identities = 227/266 (85%), Positives = 247/266 (92%)
 Frame = +1

Query: 1    SILGERGRLDSELRSMQDLVEDFKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEA 180
            SI+GERGRLDSELR+MQDLVED KNKYEDEINKRT AENEFV LKKDVDAAYMNKVEL+A
Sbjct: 227  SIVGERGRLDSELRNMQDLVEDLKNKYEDEINKRTAAENEFVTLKKDVDAAYMNKVELQA 286

Query: 181  KVDALMDEINFTKMFFEAELSQMQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIAN 360
            K D L DEINF +  ++AELSQMQTH+SDTSVVLSMDNNRNLDLDSIIAEVKAQYE+IA 
Sbjct: 287  KADTLTDEINFLRALYDAELSQMQTHISDTSVVLSMDNNRNLDLDSIIAEVKAQYEEIAQ 346

Query: 361  RSRTEAESWYQTKYEELQQTAGRHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQ 540
            RSR EAESWYQTKYEELQ TAGRHGDDLRNTK EI+E+NRMIQRLR+EID+VKKQCA+LQ
Sbjct: 347  RSRAEAESWYQTKYEELQVTAGRHGDDLRNTKQEIAEINRMIQRLRSEIDHVKKQCASLQ 406

Query: 541  NAIADAEQRGELALKDARNKLAELEDALQKAKQDMARLLREYQELMNTKLALDVEIATYR 720
             AIADAEQRGE+ALKDA+NKL  LEDALQKAKQD+ARLL+EYQELMN KLALDVEIATYR
Sbjct: 407  AAIADAEQRGEMALKDAKNKLEGLEDALQKAKQDLARLLKEYQELMNVKLALDVEIATYR 466

Query: 721  KLLEGEECRLSGEGVGPVNISVVTNT 798
            KLLEGEECRL+GEGVG VN+SVV +T
Sbjct: 467  KLLEGEECRLNGEGVGQVNVSVVQST 492


>ref|NP_004684.2| keratin, type II cytoskeletal 75 [Homo sapiens].
          Length = 551

 Score =  444 bits (1142), Expect = e-125
 Identities = 230/266 (86%), Positives = 245/266 (92%)
 Frame = +1

Query: 1    SILGERGRLDSELRSMQDLVEDFKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEA 180
            SI  ERGRL++ELR+MQD+VEDFK +YEDEINKRT AENEFV LKKDVDAAYMNKVELEA
Sbjct: 213  SITTERGRLEAELRNMQDVVEDFKVRYEDEINKRTAAENEFVALKKDVDAAYMNKVELEA 272

Query: 181  KVDALMDEINFTKMFFEAELSQMQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIAN 360
            KV +L +EINF    F+AELSQ+QT V DTSVVLSMDNNRNLDLDSIIAEVKAQYEDIAN
Sbjct: 273  KVKSLPEEINFIHSVFDAELSQLQTQVGDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIAN 332

Query: 361  RSRTEAESWYQTKYEELQQTAGRHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQ 540
            RSR EAESWYQTKYEELQ TAGRHGDDLRNTK EISEMNRMIQRLRAEID+VKKQC++LQ
Sbjct: 333  RSRAEAESWYQTKYEELQVTAGRHGDDLRNTKQEISEMNRMIQRLRAEIDSVKKQCSSLQ 392

Query: 541  NAIADAEQRGELALKDARNKLAELEDALQKAKQDMARLLREYQELMNTKLALDVEIATYR 720
             AIADAEQRGELALKDAR KL +LE+ALQKAKQDMARLLREYQELMN KLALDVEIATYR
Sbjct: 393  TAIADAEQRGELALKDARAKLVDLEEALQKAKQDMARLLREYQELMNIKLALDVEIATYR 452

Query: 721  KLLEGEECRLSGEGVGPVNISVVTNT 798
            KLLEGEECRLSGEGV PVNISVVT+T
Sbjct: 453  KLLEGEECRLSGEGVSPVNISVVTST 478


>ref|NP_476429.2| keratin, type II cytoskeletal 3 [Homo sapiens].
          Length = 628

 Score =  400 bits (1029), Expect = e-111
 Identities = 207/266 (77%), Positives = 237/266 (89%)
 Frame = +1

Query: 1    SILGERGRLDSELRSMQDLVEDFKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEA 180
            +ILGERGRLDSEL++M+DLVEDFK KYEDEINKRT AENEFV LKKDVD+AYMNKVEL+A
Sbjct: 264  NILGERGRLDSELKNMEDLVEDFKKKYEDEINKRTAAENEFVTLKKDVDSAYMNKVELQA 323

Query: 181  KVDALMDEINFTKMFFEAELSQMQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIAN 360
            KVDAL+DEI+F +  ++AELSQMQ+H+SDTSVVLSMDNNR+LDLDSIIAEV+AQYEDIA 
Sbjct: 324  KVDALIDEIDFLRTLYDAELSQMQSHISDTSVVLSMDNNRSLDLDSIIAEVRAQYEDIAQ 383

Query: 361  RSRTEAESWYQTKYEELQQTAGRHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQ 540
            RS+ EAE+ YQTK  ELQ TAGRHGDDLRNTK EI E+NRMIQRLRAEI+ VKKQ ANLQ
Sbjct: 384  RSKAEAEALYQTKLGELQTTAGRHGDDLRNTKSEIIELNRMIQRLRAEIEGVKKQNANLQ 443

Query: 541  NAIADAEQRGELALKDARNKLAELEDALQKAKQDMARLLREYQELMNTKLALDVEIATYR 720
             AIA+AEQ GE+ALKDA  KL EL+ ALQ+AK D+ARLLR+YQELMN KLALDVEIATYR
Sbjct: 444  TAIAEAEQHGEMALKDANAKLQELQAALQQAKDDLARLLRDYQELMNVKLALDVEIATYR 503

Query: 721  KLLEGEECRLSGEGVGPVNISVVTNT 798
            KLLEGEE R+SGE    V+ISVV+++
Sbjct: 504  KLLEGEEYRMSGECPSAVSISVVSSS 529


>ref|NP_056932.2| keratin, type II cytoskeletal 2 oral [Homo sapiens].
          Length = 638

 Score =  397 bits (1020), Expect = e-110
 Identities = 206/265 (77%), Positives = 232/265 (87%)
 Frame = +1

Query: 1    SILGERGRLDSELRSMQDLVEDFKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEA 180
            S+LGERG L+ EL+SMQDLVEDFK KYEDEINKRT AENEFV LKKDVDAA+MNKVEL+A
Sbjct: 247  SLLGERGNLEGELKSMQDLVEDFKKKYEDEINKRTAAENEFVGLKKDVDAAFMNKVELQA 306

Query: 181  KVDALMDEINFTKMFFEAELSQMQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIAN 360
            KVD+L DE++F +  +E ELSQMQ+H SDTSVVLSMDNNR LDL SIIAEV+AQYE+IA 
Sbjct: 307  KVDSLTDEVSFLRTLYEMELSQMQSHASDTSVVLSMDNNRCLDLGSIIAEVRAQYEEIAQ 366

Query: 361  RSRTEAESWYQTKYEELQQTAGRHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQ 540
            RS++EAE+ YQTK  ELQ TAGRHGDDLRNTK EI E+NRMIQRLRAEI+NVKKQ ANLQ
Sbjct: 367  RSKSEAEALYQTKLGELQTTAGRHGDDLRNTKSEIMELNRMIQRLRAEIENVKKQNANLQ 426

Query: 541  NAIADAEQRGELALKDARNKLAELEDALQKAKQDMARLLREYQELMNTKLALDVEIATYR 720
             AIA+AEQRGE+ALKDA  KL +L+ ALQKAK D+ARLLR+YQELMN KLALDVEIATYR
Sbjct: 427  TAIAEAEQRGEMALKDANAKLQDLQTALQKAKDDLARLLRDYQELMNVKLALDVEIATYR 486

Query: 721  KLLEGEECRLSGEGVGPVNISVVTN 795
            KLLEGEECR+SGE    V ISVV+N
Sbjct: 487  KLLEGEECRMSGECQSAVCISVVSN 511


>ref|NP_005547.3| keratin, type II cytoskeletal 7 [Homo sapiens].
          Length = 469

 Score =  386 bits (991), Expect = e-107
 Identities = 197/260 (75%), Positives = 229/260 (88%)
 Frame = +1

Query: 19  GRLDSELRSMQDLVEDFKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEAKVDALM 198
           GRL++ELRSMQD+VEDFKNKYEDEIN RT AENEFV+LKKDVDAAYM+KVELEAKVDAL 
Sbjct: 160 GRLEAELRSMQDVVEDFKNKYEDEINHRTAAENEFVVLKKDVDAAYMSKVELEAKVDALN 219

Query: 199 DEINFTKMFFEAELSQMQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIANRSRTEA 378
           DEINF +   E EL+++Q+ +SDTSVVLSMDN+R+LDLD IIAEVKAQYE++A  SR EA
Sbjct: 220 DEINFLRTLNETELTELQSQISDTSVVLSMDNSRSLDLDGIIAEVKAQYEEMAKCSRAEA 279

Query: 379 ESWYQTKYEELQQTAGRHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQNAIADA 558
           E+WYQTK+E LQ  AG+HGDDLRNT++EISEMNR IQRL+AEIDN+K Q A L+ AIA+A
Sbjct: 280 EAWYQTKFETLQAQAGKHGDDLRNTRNEISEMNRAIQRLQAEIDNIKNQRAKLEAAIAEA 339

Query: 559 EQRGELALKDARNKLAELEDALQKAKQDMARLLREYQELMNTKLALDVEIATYRKLLEGE 738
           E+RGELALKDAR K  ELE ALQ+ KQDMAR LREYQELM+ KLALD+EIATYRKLLEGE
Sbjct: 340 EERGELALKDARAKQEELEAALQRGKQDMARQLREYQELMSVKLALDIEIATYRKLLEGE 399

Query: 739 ECRLSGEGVGPVNISVVTNT 798
           E RL+G+GVG VNISV+ +T
Sbjct: 400 ESRLAGDGVGAVNISVMNST 419


>ref|NP_002263.3| keratin, type II cytoskeletal 4 [Homo sapiens].
          Length = 520

 Score =  381 bits (978), Expect = e-106
 Identities = 192/262 (73%), Positives = 232/262 (88%)
 Frame = +1

Query: 13  ERGRLDSELRSMQDLVEDFKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEAKVDA 192
           ++GRL SEL++MQD VEDFK KYE+EINKRT AEN+FV+LKKDVDAAY+NKVELEAKVD+
Sbjct: 205 DKGRLQSELKTMQDSVEDFKTKYEEEINKRTAAENDFVVLKKDVDAAYLNKVELEAKVDS 264

Query: 193 LMDEINFTKMFFEAELSQMQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIANRSRT 372
           L DEINF K+ ++AELSQMQTHVSDTSVVLSMDNNRNLDLDSIIAEV+AQYE+IA RS+ 
Sbjct: 265 LNDEINFLKVLYDAELSQMQTHVSDTSVVLSMDNNRNLDLDSIIAEVRAQYEEIAQRSKA 324

Query: 373 EAESWYQTKYEELQQTAGRHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQNAIA 552
           EAE+ YQTK ++LQ +  +HGD+L+NTK EI+E+NRMIQRLRAEI+N+KKQC  LQ ++A
Sbjct: 325 EAEALYQTKVQQLQISVDQHGDNLKNTKSEIAELNRMIQRLRAEIENIKKQCQTLQVSVA 384

Query: 553 DAEQRGELALKDARNKLAELEDALQKAKQDMARLLREYQELMNTKLALDVEIATYRKLLE 732
           DAEQRGE ALKDA +K  ELE ALQ+AK+++AR+LREYQELM+ KLALD+EIATYRKLLE
Sbjct: 385 DAEQRGENALKDAHSKRVELEAALQQAKEELARMLREYQELMSVKLALDIEIATYRKLLE 444

Query: 733 GEECRLSGEGVGPVNISVVTNT 798
           GEE R+SGE    V+ISVV+ +
Sbjct: 445 GEEYRMSGECQSAVSISVVSGS 466


>ref|NP_778238.1| keratin, type II cytoskeletal 73 [Homo sapiens].
          Length = 540

 Score =  379 bits (974), Expect = e-105
 Identities = 186/266 (69%), Positives = 237/266 (89%)
 Frame = +1

Query: 1   SILGERGRLDSELRSMQDLVEDFKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEA 180
           ++ G+R RLDSELRS++++VED+K +YE+EINKRTTAENEFV+LKKDVDAAY +KVEL+A
Sbjct: 196 TLSGDRVRLDSELRSVREVVEDYKKRYEEEINKRTTAENEFVVLKKDVDAAYTSKVELQA 255

Query: 181 KVDALMDEINFTKMFFEAELSQMQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIAN 360
           KVDAL  EI F K  +E E +Q+Q+H+SDTS++LSMDNNRNLDLDSIIAEV+AQYE+IA 
Sbjct: 256 KVDALDGEIKFFKCLYEGETAQIQSHISDTSIILSMDNNRNLDLDSIIAEVRAQYEEIAR 315

Query: 361 RSRTEAESWYQTKYEELQQTAGRHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQ 540
           +S+ EAE+ YQTK++ELQ  AGRHGDDL++TK+EISE+ R+IQRLR+EI++VKKQCANL+
Sbjct: 316 KSKAEAEALYQTKFQELQLAAGRHGDDLKHTKNEISELTRLIQRLRSEIESVKKQCANLE 375

Query: 541 NAIADAEQRGELALKDARNKLAELEDALQKAKQDMARLLREYQELMNTKLALDVEIATYR 720
            AIADAEQRG+ ALKDAR KL ELE ALQ+AK+++AR+LREYQEL++ KL+LD+EIATYR
Sbjct: 376 TAIADAEQRGDCALKDARAKLDELEGALQQAKEELARMLREYQELLSVKLSLDIEIATYR 435

Query: 721 KLLEGEECRLSGEGVGPVNISVVTNT 798
           KLLEGEECR+SGE    V+ISV+ ++
Sbjct: 436 KLLEGEECRMSGEYTNSVSISVINSS 461


  Database: RefSeq49_HP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,297,164
  Number of sequences in database:  32,964
  
Lambda     K      H
   0.315    0.130    0.360 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 38,151,950
Number of extensions: 928825
Number of successful extensions: 5955
Number of sequences better than 1.0e-05: 95
Number of HSP's gapped: 5725
Number of HSP's successfully gapped: 98
Length of query: 452
Length of database: 18,297,164
Length adjustment: 106
Effective length of query: 346
Effective length of database: 14,802,980
Effective search space: 5121831080
Effective search space used: 5121831080
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 35 (18.1 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-007303
         (1356 letters)

Database: RefSeq49_MP.fasta 
           30,036 sequences; 15,617,559 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_081287.1| keratin, type II cytoskeletal 5 [Mus musculus].      498   e-141
Alignment   gi|NP_032502.3| keratin, type II cytoskeletal 6A [Mus musculus].     451   e-127
Alignment   gi|NP_034799.2| keratin, type II cytoskeletal 6B [Mus musculus].     448   e-126
Alignment   gi|NP_579935.1| keratin, type II cytoskeletal 75 [Mus musculus].     444   e-125
Alignment   gi|NP_808385.2| hypothetical protein LOC239673 [Mus musculus].       432   e-121
Alignment   gi|NP_001028349.1| keratin, type II cytoskeletal 2 oral [Mus mu...   388   e-108
Alignment   gi|NP_032501.2| keratin, type II cytoskeletal 4 [Mus musculus].      387   e-107
Alignment   gi|NP_149064.1| keratin, type II cytoskeletal 7 [Mus musculus].      385   e-107
Alignment   gi|NP_997650.1| keratin, type II cytoskeletal 73 [Mus musculus].     381   e-106
Alignment   gi|NP_001003670.1| type II keratin Kb14 [Mus musculus].              376   e-104

>ref|NP_081287.1| keratin, type II cytoskeletal 5 [Mus musculus].
          Length = 580

 Score =  498 bits (1283), Expect = e-141
 Identities = 253/265 (95%), Positives = 263/265 (99%)
 Frame = +1

Query: 4    ILGERGRLDSELRSMQDLVEDFKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEAK 183
            +LGERGRLDSELR+MQDLVED+KNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEA+
Sbjct: 227  VLGERGRLDSELRNMQDLVEDYKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEAR 286

Query: 184  VDALMDEINFTKMFFEAELSQMQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIANR 363
            VDALMDEINF KMFF+AELSQMQTHVSDTSVVLSMDNNR+LDLDSIIAEVKAQYEDIANR
Sbjct: 287  VDALMDEINFMKMFFDAELSQMQTHVSDTSVVLSMDNNRSLDLDSIIAEVKAQYEDIANR 346

Query: 364  SRTEAESWYQTKYEELQQTAGRHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQN 543
            SRTEAESWYQTKYEELQQTAGRHGDDLRNTKHEISEMNRMIQRLR+EIDNVKKQCANLQN
Sbjct: 347  SRTEAESWYQTKYEELQQTAGRHGDDLRNTKHEISEMNRMIQRLRSEIDNVKKQCANLQN 406

Query: 544  AIADAEQRGELALKDARNKLAELEDALQKAKQDMARLLREYQELMNTKLALDVEIATYRK 723
            AIA+AEQRGELALKDARNKL ELE+ALQKAKQDMARLLREYQELMNTKLALDVEIATYRK
Sbjct: 407  AIAEAEQRGELALKDARNKLTELEEALQKAKQDMARLLREYQELMNTKLALDVEIATYRK 466

Query: 724  LLEGEECRLSGEGVGPVNISVVTNT 798
            LLEGEECRLSGEGVGPVNISVVTN+
Sbjct: 467  LLEGEECRLSGEGVGPVNISVVTNS 491


>ref|NP_032502.3| keratin, type II cytoskeletal 6A [Mus musculus].
          Length = 553

 Score =  451 bits (1161), Expect = e-127
 Identities = 229/266 (86%), Positives = 248/266 (93%)
 Frame = +1

Query: 1    SILGERGRLDSELRSMQDLVEDFKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEA 180
            SI+GERGRLDSELR+MQD VED+K+KYEDEINKRT AENEFV LKKDVDAAYMNKVEL+A
Sbjct: 216  SIIGERGRLDSELRNMQDTVEDYKSKYEDEINKRTAAENEFVTLKKDVDAAYMNKVELQA 275

Query: 181  KVDALMDEINFTKMFFEAELSQMQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIAN 360
            K D+L D+INF +  +EAELSQMQTH+SDTSVVLSMDNNR+LDLDSIIAEVKAQYEDIA 
Sbjct: 276  KADSLTDDINFLRALYEAELSQMQTHISDTSVVLSMDNNRSLDLDSIIAEVKAQYEDIAQ 335

Query: 361  RSRTEAESWYQTKYEELQQTAGRHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQ 540
            RSR EAESWYQTKYEELQ TAGRHGDDLRNTK EI+E+NRMIQRLR+EID+VKKQCANLQ
Sbjct: 336  RSRAEAESWYQTKYEELQVTAGRHGDDLRNTKQEIAEINRMIQRLRSEIDHVKKQCANLQ 395

Query: 541  NAIADAEQRGELALKDARNKLAELEDALQKAKQDMARLLREYQELMNTKLALDVEIATYR 720
             AIADAEQRGE+ALKDAR KL  LEDALQKAKQDMARLL+EYQELMN KLALDVEIATYR
Sbjct: 396  AAIADAEQRGEMALKDARGKLEGLEDALQKAKQDMARLLKEYQELMNVKLALDVEIATYR 455

Query: 721  KLLEGEECRLSGEGVGPVNISVVTNT 798
            KLLEGEECRL+GEGVGPVNISVV +T
Sbjct: 456  KLLEGEECRLNGEGVGPVNISVVQST 481


>ref|NP_034799.2| keratin, type II cytoskeletal 6B [Mus musculus].
          Length = 554

 Score =  448 bits (1152), Expect = e-126
 Identities = 227/266 (85%), Positives = 248/266 (93%)
 Frame = +1

Query: 1    SILGERGRLDSELRSMQDLVEDFKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEA 180
            SI+GERGRLDSELR+MQD VED+K+KYEDEINKRT AENEFV +KKDVDAAYM KVEL+A
Sbjct: 216  SIIGERGRLDSELRNMQDTVEDYKSKYEDEINKRTKAENEFVTVKKDVDAAYMTKVELQA 275

Query: 181  KVDALMDEINFTKMFFEAELSQMQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIAN 360
            K D+L DEINF ++ +EAELSQMQTH+SDTSVVLSMDNNR+LDLDSIIAEVKAQYEDIA 
Sbjct: 276  KADSLADEINFLRVIYEAELSQMQTHISDTSVVLSMDNNRSLDLDSIIAEVKAQYEDIAQ 335

Query: 361  RSRTEAESWYQTKYEELQQTAGRHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQ 540
            RSR EAESWYQTKYEELQ TAGRHGDDLRNTK EI+E+NRMIQRLR+EID+VKKQCANLQ
Sbjct: 336  RSRAEAESWYQTKYEELQVTAGRHGDDLRNTKQEIAEINRMIQRLRSEIDHVKKQCANLQ 395

Query: 541  NAIADAEQRGELALKDARNKLAELEDALQKAKQDMARLLREYQELMNTKLALDVEIATYR 720
             AIADAEQRGE+ALKDAR KL  LEDALQKAKQ+MARLL+EYQELMN KLALDVEIATYR
Sbjct: 396  AAIADAEQRGEMALKDARGKLEGLEDALQKAKQEMARLLKEYQELMNVKLALDVEIATYR 455

Query: 721  KLLEGEECRLSGEGVGPVNISVVTNT 798
            KLLEGEECRL+GEGVGPVNISVV +T
Sbjct: 456  KLLEGEECRLNGEGVGPVNISVVQST 481


>ref|NP_579935.1| keratin, type II cytoskeletal 75 [Mus musculus].
          Length = 551

 Score =  444 bits (1143), Expect = e-125
 Identities = 229/265 (86%), Positives = 245/265 (92%)
 Frame = +1

Query: 4    ILGERGRLDSELRSMQDLVEDFKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEAK 183
            I  ERGRLD+ELR+MQ++VEDFK +YEDEINKR  AENEFV LKKDVD+AYMNKVELEAK
Sbjct: 215  ITAERGRLDAELRNMQEVVEDFKVRYEDEINKRAAAENEFVGLKKDVDSAYMNKVELEAK 274

Query: 184  VDALMDEINFTKMFFEAELSQMQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIANR 363
            VD+L D+INF +M +EAELSQMQ  VSDTSVVLSMDNNR+LDLDSIIAEVKAQYEDIANR
Sbjct: 275  VDSLTDQINFYRMIYEAELSQMQNQVSDTSVVLSMDNNRSLDLDSIIAEVKAQYEDIANR 334

Query: 364  SRTEAESWYQTKYEELQQTAGRHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQN 543
            SR EAESWYQTKYEELQ TAGRHGDDLRNTK EISEMNRMIQRLR+EID VKKQC++LQ 
Sbjct: 335  SRAEAESWYQTKYEELQVTAGRHGDDLRNTKQEISEMNRMIQRLRSEIDAVKKQCSSLQT 394

Query: 544  AIADAEQRGELALKDARNKLAELEDALQKAKQDMARLLREYQELMNTKLALDVEIATYRK 723
            AI+DAEQRGELALKDAR KL ELEDALQKAKQDMARLLREYQELMN KLALDVEIATYRK
Sbjct: 395  AISDAEQRGELALKDARAKLMELEDALQKAKQDMARLLREYQELMNVKLALDVEIATYRK 454

Query: 724  LLEGEECRLSGEGVGPVNISVVTNT 798
            LLEGEECRLSGEGV PVNISVVT+T
Sbjct: 455  LLEGEECRLSGEGVSPVNISVVTST 479


>ref|NP_808385.2| hypothetical protein LOC239673 [Mus musculus].
          Length = 538

 Score =  432 bits (1110), Expect = e-121
 Identities = 217/263 (82%), Positives = 247/263 (93%)
 Frame = +1

Query: 10  GERGRLDSELRSMQDLVEDFKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEAKVD 189
           GER RL++EL+SMQD+VEDFKNKYE+EI++RT AENEFV+LKKDVDAAYMNKVELEAKV+
Sbjct: 208 GERSRLETELKSMQDVVEDFKNKYEEEIHRRTAAENEFVVLKKDVDAAYMNKVELEAKVE 267

Query: 190 ALMDEINFTKMFFEAELSQMQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIANRSR 369
           ALMDEINF + FFEAEL+Q+Q  +S+TSVVLSMDNNR+L+LDSIIAEVKAQYEDIANRSR
Sbjct: 268 ALMDEINFLRAFFEAELAQLQAQISETSVVLSMDNNRSLNLDSIIAEVKAQYEDIANRSR 327

Query: 370 TEAESWYQTKYEELQQTAGRHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQNAI 549
            EAESWYQTKYEELQ++AG+ GDDLR TK EISE+NR +QRLR+EIDN+KKQCA LQ +I
Sbjct: 328 AEAESWYQTKYEELQRSAGQRGDDLRTTKMEISELNRAMQRLRSEIDNLKKQCATLQASI 387

Query: 550 ADAEQRGELALKDARNKLAELEDALQKAKQDMARLLREYQELMNTKLALDVEIATYRKLL 729
           ADAEQRGELALKDA+NKLAELEDALQKAKQDMAR LREYQELMN KLALD+EIATYRKLL
Sbjct: 388 ADAEQRGELALKDAKNKLAELEDALQKAKQDMARQLREYQELMNVKLALDIEIATYRKLL 447

Query: 730 EGEECRLSGEGVGPVNISVVTNT 798
           EGEECRL+GEGVG VNISVV+++
Sbjct: 448 EGEECRLTGEGVGAVNISVVSSS 470


>ref|NP_001028349.1| keratin, type II cytoskeletal 2 oral [Mus musculus].
          Length = 594

 Score =  388 bits (996), Expect = e-108
 Identities = 200/265 (75%), Positives = 230/265 (86%)
 Frame = +1

Query: 1    SILGERGRLDSELRSMQDLVEDFKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEA 180
            S+LG +G L+ EL+SMQDLVEDFK KYE+EIN+RT AENEFV LKKDVD A+MNKVEL+A
Sbjct: 231  SLLGAKGSLEGELKSMQDLVEDFKKKYEEEINRRTAAENEFVGLKKDVDGAFMNKVELQA 290

Query: 181  KVDALMDEINFTKMFFEAELSQMQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIAN 360
            KVD+L DEINF +  ++ ELSQ+Q+HVSDTSVVLSMDNNR LDLDSIIAEVKAQYEDIA 
Sbjct: 291  KVDSLTDEINFLRTLYDMELSQIQSHVSDTSVVLSMDNNRCLDLDSIIAEVKAQYEDIAQ 350

Query: 361  RSRTEAESWYQTKYEELQQTAGRHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQ 540
            +S+ EAE+ YQTK  ELQ TAGRHGDDLR+TK EI ++NRMIQRLRAEI+NVKKQ  N+Q
Sbjct: 351  KSKAEAEALYQTKLGELQTTAGRHGDDLRSTKSEIMDLNRMIQRLRAEIENVKKQNTNMQ 410

Query: 541  NAIADAEQRGELALKDARNKLAELEDALQKAKQDMARLLREYQELMNTKLALDVEIATYR 720
             +IA+AEQRGE ALKDA  K  +L+ ALQKAK+DMARLL+EYQELMN KLALDVEIATYR
Sbjct: 411  TSIAEAEQRGERALKDADTKFQDLQVALQKAKEDMARLLKEYQELMNVKLALDVEIATYR 470

Query: 721  KLLEGEECRLSGEGVGPVNISVVTN 795
            KLLEGEECRLSGE    V+ISVV+N
Sbjct: 471  KLLEGEECRLSGEFQNAVSISVVSN 495


>ref|NP_032501.2| keratin, type II cytoskeletal 4 [Mus musculus].
          Length = 525

 Score =  387 bits (993), Expect = e-107
 Identities = 195/263 (74%), Positives = 230/263 (87%)
 Frame = +1

Query: 1   SILGERGRLDSELRSMQDLVEDFKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEA 180
           ++  ++GRL SEL+ MQD VEDFK KYE+EINKRT AEN+FV+LKKDVDAAYM KVELEA
Sbjct: 210 TLSNDKGRLQSELKMMQDSVEDFKTKYEEEINKRTAAENDFVVLKKDVDAAYMIKVELEA 269

Query: 181 KVDALMDEINFTKMFFEAELSQMQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIAN 360
           K+++L DEINFT++ +EAEL+QMQTHVSDTSVVLSMDNNRNLDLD IIAEV+AQYEDIA 
Sbjct: 270 KMESLKDEINFTRVLYEAELAQMQTHVSDTSVVLSMDNNRNLDLDGIIAEVRAQYEDIAR 329

Query: 361 RSRTEAESWYQTKYEELQQTAGRHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQ 540
           +S+ E ESWYQ K ++LQ +A +HGD L+ TK+EISE+NRMIQRLRAEI+N+KKQ   LQ
Sbjct: 330 KSKAEVESWYQIKVQQLQMSADQHGDSLKTTKNEISELNRMIQRLRAEIENIKKQSQTLQ 389

Query: 541 NAIADAEQRGELALKDARNKLAELEDALQKAKQDMARLLREYQELMNTKLALDVEIATYR 720
            ++ADAEQRGELALKDA +K AELE ALQKAK+D+ARLLR+YQ LMN KLALDVEIATYR
Sbjct: 390 ASVADAEQRGELALKDAYSKRAELETALQKAKEDLARLLRDYQALMNVKLALDVEIATYR 449

Query: 721 KLLEGEECRLSGEGVGPVNISVV 789
           KLLEGEECR+SGE    V+ISVV
Sbjct: 450 KLLEGEECRMSGECKSAVSISVV 472


>ref|NP_149064.1| keratin, type II cytoskeletal 7 [Mus musculus].
          Length = 457

 Score =  385 bits (990), Expect = e-107
 Identities = 192/260 (73%), Positives = 230/260 (88%)
 Frame = +1

Query: 19  GRLDSELRSMQDLVEDFKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEAKVDALM 198
           GRL+ ELR+MQD+VEDFKNKYE+EIN+RT AENEFV+LKKDVDAAY NKVELEAK D+L 
Sbjct: 154 GRLEVELRNMQDVVEDFKNKYEEEINRRTAAENEFVLLKKDVDAAYTNKVELEAKADSLQ 213

Query: 199 DEINFTKMFFEAELSQMQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIANRSRTEA 378
           DEINF K   E EL+++Q+ +SDTSVVLSMDN+R+LDLD IIA+VKAQYE++AN SR EA
Sbjct: 214 DEINFLKTLHETELAELQSQISDTSVVLSMDNSRSLDLDGIIADVKAQYEEMANHSRAEA 273

Query: 379 ESWYQTKYEELQQTAGRHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQNAIADA 558
           E+WYQTK+E LQ  AG+HGDDLRNT++EI+EMNR IQRL+AEID +K Q A L+++IA+A
Sbjct: 274 EAWYQTKFETLQAQAGKHGDDLRNTRNEIAEMNRSIQRLQAEIDTLKNQRAKLESSIAEA 333

Query: 559 EQRGELALKDARNKLAELEDALQKAKQDMARLLREYQELMNTKLALDVEIATYRKLLEGE 738
           E++GELA+KDA  K  ELE ALQKAKQD+AR LREYQEL+NTKLALD+EIATYRKLLEGE
Sbjct: 334 EEQGELAIKDAHAKQGELEAALQKAKQDVARQLREYQELLNTKLALDIEIATYRKLLEGE 393

Query: 739 ECRLSGEGVGPVNISVVTNT 798
           E RLSG+G+GPVNISVV +T
Sbjct: 394 ESRLSGDGMGPVNISVVNST 413


>ref|NP_997650.1| keratin, type II cytoskeletal 73 [Mus musculus].
          Length = 539

 Score =  381 bits (978), Expect = e-106
 Identities = 191/266 (71%), Positives = 235/266 (88%)
 Frame = +1

Query: 1   SILGERGRLDSELRSMQDLVEDFKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEA 180
           S+ G+R RLDSELR M+D VED K +YE+EINKRTTAENEFV+LKKDVDAAYM+KVEL+A
Sbjct: 195 SLSGDRVRLDSELRGMRDAVEDCKKRYEEEINKRTTAENEFVVLKKDVDAAYMSKVELQA 254

Query: 181 KVDALMDEINFTKMFFEAELSQMQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIAN 360
           KVDAL  EI F K  +E E++QMQ+H+SDTSVVLSMDNNRNLDLDSIIAEV+AQYEDIA 
Sbjct: 255 KVDALDGEIKFLKCLYEGEITQMQSHISDTSVVLSMDNNRNLDLDSIIAEVRAQYEDIAL 314

Query: 361 RSRTEAESWYQTKYEELQQTAGRHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQ 540
           +S+ EAE  YQTK++ELQ  AGRHGDDL++T++EISE+ R+IQRLR+EI++VKKQC+NL+
Sbjct: 315 KSKAEAEMVYQTKFQELQLAAGRHGDDLKHTRNEISELTRLIQRLRSEIESVKKQCSNLE 374

Query: 541 NAIADAEQRGELALKDARNKLAELEDALQKAKQDMARLLREYQELMNTKLALDVEIATYR 720
            AIADAEQRG+ ALKDAR KL ELE AL +AK+++AR+LRE+QELM+ KLALD+EIATYR
Sbjct: 375 TAIADAEQRGDCALKDARAKLDELERALHQAKEELARMLREHQELMSMKLALDIEIATYR 434

Query: 721 KLLEGEECRLSGEGVGPVNISVVTNT 798
           KLLEGEECR+SGE    V+ISV++++
Sbjct: 435 KLLEGEECRMSGEHTSAVSISVISSS 460


>ref|NP_001003670.1| type II keratin Kb14 [Mus musculus].
          Length = 552

 Score =  376 bits (966), Expect = e-104
 Identities = 189/264 (71%), Positives = 226/264 (85%)
 Frame = +1

Query: 7    LGERGRLDSELRSMQDLVEDFKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEAKV 186
            + E+G LD+ELR  Q ++ED+K KYEDEI+KRT AENEF+ LKKD DAA+M + EL AKV
Sbjct: 218  VAEKGHLDAELRRSQGVLEDYKYKYEDEISKRTAAENEFLTLKKDADAAFMIENELTAKV 277

Query: 187  DALMDEINFTKMFFEAELSQMQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIANRS 366
             +L+DEINF +  F+AE+SQMQT +SDTSV++SMDNN +LD++SIIAEVK QYE+IA +S
Sbjct: 278  HSLIDEINFLRTLFDAEMSQMQTPLSDTSVIISMDNNHSLDMESIIAEVKTQYENIAKKS 337

Query: 367  RTEAESWYQTKYEELQQTAGRHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQNA 546
            + EAESWYQTKYEELQ TAGRHGDDLRNTK EI+E+NRMIQRLR+EID+VKKQCANLQ A
Sbjct: 338  QAEAESWYQTKYEELQVTAGRHGDDLRNTKQEIAEINRMIQRLRSEIDHVKKQCANLQAA 397

Query: 547  IADAEQRGELALKDARNKLAELEDALQKAKQDMARLLREYQELMNTKLALDVEIATYRKL 726
            IADAEQRGE+ALKDAR KL  L+DA QKAKQD  RL +EYQEL++  + LDVEI TYRKL
Sbjct: 398  IADAEQRGEMALKDARGKLEGLKDAPQKAKQDRTRLQKEYQELLSVNIYLDVEITTYRKL 457

Query: 727  LEGEECRLSGEGVGPVNISVVTNT 798
            LEGEE R +GEG+GPVNISVV +T
Sbjct: 458  LEGEENRFNGEGIGPVNISVVPST 481


  Database: RefSeq49_MP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 15,617,559
  Number of sequences in database:  30,036
  
Lambda     K      H
   0.315    0.130    0.360 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 32,188,939
Number of extensions: 770823
Number of successful extensions: 5057
Number of sequences better than 1.0e-05: 98
Number of HSP's gapped: 4807
Number of HSP's successfully gapped: 99
Length of query: 452
Length of database: 15,617,559
Length adjustment: 105
Effective length of query: 347
Effective length of database: 12,463,779
Effective search space: 4324931313
Effective search space used: 4324931313
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 35 (18.1 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-007303
         (1356 letters)

Database: RefSeq49_SP.fasta 
           24,897 sequences; 11,343,932 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_003126221.1| PREDICTED: keratin, type II cytoskeletal 5 [...   515   e-146
Alignment   gi|XP_003355441.1| PREDICTED: keratin, type II cytoskeletal 75-...   437   e-123
Alignment   gi|XP_003126216.2| PREDICTED: keratin, type II cytoskeletal 75-...   410   e-115
Alignment   gi|XP_001929315.3| PREDICTED: keratin, type II cytoskeletal 71-...   385   e-107
Alignment   gi|XP_001927240.2| PREDICTED: keratin, type II cytoskeletal 79 ...   384   e-107
Alignment   gi|XP_001927253.2| PREDICTED: LOW QUALITY PROTEIN: keratin, typ...   377   e-105
Alignment   gi|XP_001927280.1| PREDICTED: keratin, type II cytoskeletal 3-l...   372   e-103
Alignment   gi|XP_003126223.2| PREDICTED: keratin, type II cytoskeletal 73 ...   365   e-101
Alignment   gi|NP_001230743.1| keratin 74 [Sus scrofa].                          365   e-101
Alignment   gi|NP_001092053.1| keratin, type II cytoskeletal 2 epidermal [S...   352   3e-97

>ref|XP_003126221.1| PREDICTED: keratin, type II cytoskeletal 5 [Sus scrofa].
          Length = 602

 Score =  515 bits (1327), Expect = e-146
 Identities = 265/266 (99%), Positives = 266/266 (100%)
 Frame = +1

Query: 1    SILGERGRLDSELRSMQDLVEDFKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEA 180
            SILGERGRLDSELR+MQDLVEDFKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEA
Sbjct: 237  SILGERGRLDSELRNMQDLVEDFKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEA 296

Query: 181  KVDALMDEINFTKMFFEAELSQMQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIAN 360
            KVDALMDEINFTKMFFEAELSQMQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIAN
Sbjct: 297  KVDALMDEINFTKMFFEAELSQMQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIAN 356

Query: 361  RSRTEAESWYQTKYEELQQTAGRHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQ 540
            RSRTEAESWYQTKYEELQQTAGRHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQ
Sbjct: 357  RSRTEAESWYQTKYEELQQTAGRHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQ 416

Query: 541  NAIADAEQRGELALKDARNKLAELEDALQKAKQDMARLLREYQELMNTKLALDVEIATYR 720
            NAIADAEQRGELALKDARNKLAELEDALQKAKQDMARLLREYQELMNTKLALDVEIATYR
Sbjct: 417  NAIADAEQRGELALKDARNKLAELEDALQKAKQDMARLLREYQELMNTKLALDVEIATYR 476

Query: 721  KLLEGEECRLSGEGVGPVNISVVTNT 798
            KLLEGEECRLSGEGVGPVNISVVTNT
Sbjct: 477  KLLEGEECRLSGEGVGPVNISVVTNT 502


>ref|XP_003355441.1| PREDICTED: keratin, type II cytoskeletal 75-like [Sus scrofa].
          Length = 526

 Score =  437 bits (1124), Expect = e-123
 Identities = 218/266 (81%), Positives = 251/266 (94%)
 Frame = +1

Query: 1    SILGERGRLDSELRSMQDLVEDFKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEA 180
            S+ GER RL+ EL+SMQD+VEDFKNKYE+EIN+RT AENEFV+LKKDVDAAYM+KVELEA
Sbjct: 205  SLGGERSRLEVELKSMQDVVEDFKNKYEEEINRRTVAENEFVVLKKDVDAAYMSKVELEA 264

Query: 181  KVDALMDEINFTKMFFEAELSQMQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIAN 360
            KV+ALMDEINF + F++AEL+Q+Q  +S+TSV+LSMDNNR LDLDSII+EVKAQYEDIAN
Sbjct: 265  KVEALMDEINFLRAFYDAELAQLQAQISETSVILSMDNNRKLDLDSIISEVKAQYEDIAN 324

Query: 361  RSRTEAESWYQTKYEELQQTAGRHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQ 540
            RSR EAESWYQ KYEELQ++AGRHGDDLR+TK EISE+NR+IQRLR+EIDN+KKQCA LQ
Sbjct: 325  RSRAEAESWYQIKYEELQRSAGRHGDDLRSTKMEISELNRVIQRLRSEIDNLKKQCATLQ 384

Query: 541  NAIADAEQRGELALKDARNKLAELEDALQKAKQDMARLLREYQELMNTKLALDVEIATYR 720
            +AIADAEQRGELALKDA++KLAELEDALQKAKQDMAR LREYQELMN KLALD+EIATYR
Sbjct: 385  SAIADAEQRGELALKDAKHKLAELEDALQKAKQDMARQLREYQELMNVKLALDIEIATYR 444

Query: 721  KLLEGEECRLSGEGVGPVNISVVTNT 798
            KLLEGEECRL+GEGVGPVNISVV+++
Sbjct: 445  KLLEGEECRLTGEGVGPVNISVVSSS 470


>ref|XP_003126216.2| PREDICTED: keratin, type II cytoskeletal 75-like [Sus scrofa].
          Length = 587

 Score =  410 bits (1054), Expect = e-115
 Identities = 211/235 (89%), Positives = 220/235 (93%)
 Frame = +1

Query: 76  KYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEAKVDALMDEINFTKMFFEAELSQMQT 255
           +YEDEINKRT AENEFV LKKDVDAAYMNK+ELEAKV++L DEINF +M FEAELSQMQT
Sbjct: 236 RYEDEINKRTAAENEFVALKKDVDAAYMNKMELEAKVNSLTDEINFLRMLFEAELSQMQT 295

Query: 256 HVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIANRSRTEAESWYQTKYEELQQTAGRHG 435
           HVSDTSVVLSMDNNR+LDLDSIIAEVKAQYEDIANRSR EAESWYQTKYEELQ TAGRHG
Sbjct: 296 HVSDTSVVLSMDNNRSLDLDSIIAEVKAQYEDIANRSRAEAESWYQTKYEELQVTAGRHG 355

Query: 436 DDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQNAIADAEQRGELALKDARNKLAELE 615
           DDLRNTK EISE NRMIQRLRAEID+VKKQCA+LQ AIADAEQRGELALKDAR KL +LE
Sbjct: 356 DDLRNTKQEISETNRMIQRLRAEIDSVKKQCASLQTAIADAEQRGELALKDARAKLVDLE 415

Query: 616 DALQKAKQDMARLLREYQELMNTKLALDVEIATYRKLLEGEECRLSGEGVGPVNI 780
           DALQKAKQDMARLL EYQELMN KLALDVEIATYRKLLEGEECRLSGEGV PVNI
Sbjct: 416 DALQKAKQDMARLLHEYQELMNIKLALDVEIATYRKLLEGEECRLSGEGVSPVNI 470


>ref|XP_001929315.3| PREDICTED: keratin, type II cytoskeletal 71-like [Sus scrofa].
          Length = 519

 Score =  385 bits (988), Expect = e-107
 Identities = 192/266 (72%), Positives = 235/266 (88%)
 Frame = +1

Query: 1   SILGERGRLDSELRSMQDLVEDFKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEA 180
           SILGE+GRLDSELR+MQDLVEDFK KYEDEINKRT AENEFV LKKDVDAAY NKVEL+A
Sbjct: 190 SILGEKGRLDSELRNMQDLVEDFKKKYEDEINKRTAAENEFVTLKKDVDAAYANKVELQA 249

Query: 181 KVDALMDEINFTKMFFEAELSQMQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIAN 360
           KVD++  EI F K  +EAE++Q+Q+H+SD SV+LSMDNNR+L+LDSII EV+AQYE+IA 
Sbjct: 250 KVDSMDQEIKFFKCLYEAEIAQIQSHISDMSVILSMDNNRDLNLDSIIDEVRAQYEEIAL 309

Query: 361 RSRTEAESWYQTKYEELQQTAGRHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQ 540
           +S+ EAE+ YQTK++ELQ  AGRHGDDL+NTK+EISE+ R+IQR+R+EI+NVKKQ +NL+
Sbjct: 310 KSKAEAEALYQTKFQELQLAAGRHGDDLKNTKNEISELTRLIQRIRSEIENVKKQASNLE 369

Query: 541 NAIADAEQRGELALKDARNKLAELEDALQKAKQDMARLLREYQELMNTKLALDVEIATYR 720
            AIADAEQRG+ ALKDAR KL ELE AL +AK+++AR+LREYQELM+ KLALD+EIATYR
Sbjct: 370 TAIADAEQRGDNALKDARAKLDELEGALHQAKEELARMLREYQELMSLKLALDMEIATYR 429

Query: 721 KLLEGEECRLSGEGVGPVNISVVTNT 798
           KLLE EECR+SGE   PV+IS+++ T
Sbjct: 430 KLLESEECRMSGEFPSPVSISIISTT 455


>ref|XP_001927240.2| PREDICTED: keratin, type II cytoskeletal 79 [Sus scrofa].
          Length = 535

 Score =  384 bits (987), Expect = e-107
 Identities = 193/266 (72%), Positives = 228/266 (85%)
 Frame = +1

Query: 1    SILGERGRLDSELRSMQDLVEDFKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEA 180
            S+  ERGRLDSELR+MQDLVEDFKNKYEDEINKR  AENEFV+LKKDVDAA+M +++L  
Sbjct: 208  SLQSERGRLDSELRNMQDLVEDFKNKYEDEINKRNAAENEFVVLKKDVDAAFMGRMDLHG 267

Query: 181  KVDALMDEINFTKMFFEAELSQMQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIAN 360
            KVD L DEINF +  +E ELSQMQTHVSDT+V+LSMDNNRNLDLDSIIAEVKAQYE IA 
Sbjct: 268  KVDGLTDEINFLRHLYEEELSQMQTHVSDTNVILSMDNNRNLDLDSIIAEVKAQYEQIAQ 327

Query: 361  RSRTEAESWYQTKYEELQQTAGRHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQ 540
            RSR EAE+WYQ+KYEELQ TAG+HGD+LR+TK+EISE+ R +QRL+ E+D  KKQC +LQ
Sbjct: 328  RSRAEAEAWYQSKYEELQVTAGKHGDNLRDTKNEISELTRTVQRLQGEVDAAKKQCQHLQ 387

Query: 541  NAIADAEQRGELALKDARNKLAELEDALQKAKQDMARLLREYQELMNTKLALDVEIATYR 720
            +AI +AEQRG+LALKDA+ KL +L+ AL +AK+D+ARLLR+YQ LMN KLALDVEIATYR
Sbjct: 388  SAIEEAEQRGDLALKDAQKKLGDLDMALHQAKEDLARLLRDYQALMNVKLALDVEIATYR 447

Query: 721  KLLEGEECRLSGEGVGPVNISVVTNT 798
            KLLE EE R+SGE    V+ISV  N+
Sbjct: 448  KLLESEESRMSGECPSAVSISVTGNS 473


>ref|XP_001927253.2| PREDICTED: LOW QUALITY PROTEIN: keratin, type II cytoskeletal 4 [Sus
            scrofa].
          Length = 611

 Score =  377 bits (969), Expect = e-105
 Identities = 191/263 (72%), Positives = 228/263 (86%)
 Frame = +1

Query: 1    SILGERGRLDSELRSMQDLVEDFKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEA 180
            ++  ++G L SEL+ MQD VEDFK KYE+EINKRT AEN+FV+LKKDVDAAYMNKVELEA
Sbjct: 286  TLTNDKGYLQSELKIMQDSVEDFKAKYEEEINKRTAAENDFVVLKKDVDAAYMNKVELEA 345

Query: 181  KVDALMDEINFTKMFFEAELSQMQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIAN 360
            KVD L DEINF ++ + AELSQMQTHVSDTSVVLSMDNNR+LDLDSIIAEV+AQYE+I  
Sbjct: 346  KVDGLNDEINFLRILYAAELSQMQTHVSDTSVVLSMDNNRDLDLDSIIAEVRAQYEEITQ 405

Query: 361  RSRTEAESWYQTKYEELQQTAGRHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQ 540
            RS+ EAE+ YQ K ++LQ +  +HGD L+NTK+EISE+NRMIQRLRAEI+N+KKQC  LQ
Sbjct: 406  RSKAEAEALYQIKIQQLQISVDQHGDSLKNTKNEISELNRMIQRLRAEIENIKKQCQTLQ 465

Query: 541  NAIADAEQRGELALKDARNKLAELEDALQKAKQDMARLLREYQELMNTKLALDVEIATYR 720
             ++ADAEQRGE ALKDA +K AELE AL+KAK+++AR+LREYQELM+ KLALD+EIATYR
Sbjct: 466  GSVADAEQRGEAALKDAYSKRAELEAALKKAKEELARMLREYQELMSVKLALDIEIATYR 525

Query: 721  KLLEGEECRLSGEGVGPVNISVV 789
            KLLEGEECR+SGE    V+ISVV
Sbjct: 526  KLLEGEECRMSGECQSAVSISVV 548


>ref|XP_001927280.1| PREDICTED: keratin, type II cytoskeletal 3-like [Sus scrofa].
          Length = 655

 Score =  372 bits (954), Expect = e-103
 Identities = 188/262 (71%), Positives = 227/262 (86%)
 Frame = +1

Query: 13   ERGRLDSELRSMQDLVEDFKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEAKVDA 192
            E+ +L  ELRSM+++VEDFK KYE+EINKRT AEN+FV+LKKD+DAAYM KVELEAKVD+
Sbjct: 268  EKDKLQEELRSMEEMVEDFKKKYEEEINKRTAAENDFVVLKKDIDAAYMTKVELEAKVDS 327

Query: 193  LMDEINFTKMFFEAELSQMQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIANRSRT 372
            + DEINF K  ++AELSQ+Q+  SDTSVVLSMDNNR+LDLDSIIAEV+AQYE IA RS+ 
Sbjct: 328  VTDEINFLKALYDAELSQLQSDTSDTSVVLSMDNNRDLDLDSIIAEVRAQYEAIAQRSKA 387

Query: 373  EAESWYQTKYEELQQTAGRHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQNAIA 552
            EAE+ YQTK  EL+ TAGRHGDDL++T+ EISE+NR+IQRL+AEI+++KKQ  NLQ A+A
Sbjct: 388  EAEALYQTKLGELETTAGRHGDDLKSTRSEISELNRLIQRLQAEIESIKKQNTNLQTAVA 447

Query: 553  DAEQRGELALKDARNKLAELEDALQKAKQDMARLLREYQELMNTKLALDVEIATYRKLLE 732
            DAEQRGE+ALKDA  KL EL+ ALQ+AK+D+ARLL+EYQELMN KLALDVEIATYR LLE
Sbjct: 448  DAEQRGEVALKDADTKLQELKVALQQAKEDLARLLKEYQELMNVKLALDVEIATYRTLLE 507

Query: 733  GEECRLSGEGVGPVNISVVTNT 798
            GEECR+SGE    V+I +V NT
Sbjct: 508  GEECRMSGECQSAVSIEMVHNT 529


>ref|XP_003126223.2| PREDICTED: keratin, type II cytoskeletal 73 [Sus scrofa].
          Length = 518

 Score =  365 bits (938), Expect = e-101
 Identities = 182/266 (68%), Positives = 231/266 (86%)
 Frame = +1

Query: 1   SILGERGRLDSELRSMQDLVEDFKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEA 180
           ++ G+R RLDSELRS++D+VED+K +YE EIN+RT AENEFV LKKDVD AYMNKVEL+A
Sbjct: 196 ALSGDRVRLDSELRSVRDVVEDYKKRYEVEINRRTAAENEFVELKKDVDTAYMNKVELQA 255

Query: 181 KVDALMDEINFTKMFFEAELSQMQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIAN 360
           KVD+L DEI F K  +E E++Q+Q+H+SDTSV+LSMDNNR+LDLDSIIAEV+AQYEDI+ 
Sbjct: 256 KVDSLTDEIKFFKYLYEGEIAQIQSHISDTSVILSMDNNRDLDLDSIIAEVRAQYEDISL 315

Query: 361 RSRTEAESWYQTKYEELQQTAGRHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQ 540
           +S+ EAE+ YQ+K +ELQ TAG+HGDDL+ TK EIS++NR+IQR+ AEI +VKKQC+NL+
Sbjct: 316 KSKAEAEALYQSKIQELQVTAGQHGDDLKLTKAEISDLNRLIQRICAEIGSVKKQCSNLE 375

Query: 541 NAIADAEQRGELALKDARNKLAELEDALQKAKQDMARLLREYQELMNTKLALDVEIATYR 720
            AI DAEQRG+  LKDA+ KL ELE AL +AK+++AR+LREYQELM+TKLALDVEIATYR
Sbjct: 376 TAITDAEQRGDCTLKDAQAKLDELEGALYQAKEELARMLREYQELMSTKLALDVEIATYR 435

Query: 721 KLLEGEECRLSGEGVGPVNISVVTNT 798
           KLLEGEECR+ G+    ++ISV++NT
Sbjct: 436 KLLEGEECRMYGDYPNSMSISVISNT 461


>ref|NP_001230743.1| keratin 74 [Sus scrofa].
          Length = 531

 Score =  365 bits (936), Expect = e-101
 Identities = 182/266 (68%), Positives = 231/266 (86%)
 Frame = +1

Query: 1    SILGERGRLDSELRSMQDLVEDFKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEA 180
            ++ G+R RLDSEL+ MQDLVED+K +YE EIN+RT AENEFV+LKKD DAAY  KVEL+A
Sbjct: 204  ALSGDRMRLDSELKIMQDLVEDYKKRYEVEINRRTAAENEFVVLKKDADAAYTVKVELQA 263

Query: 181  KVDALMDEINFTKMFFEAELSQMQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIAN 360
            KVD+L  +I F K  ++AE++Q+QTH S+TSV+LSMDNNR+LDLDSIIAEV+AQYEDIA 
Sbjct: 264  KVDSLDKDIKFLKCLYDAEIAQVQTHASETSVILSMDNNRDLDLDSIIAEVRAQYEDIAL 323

Query: 361  RSRTEAESWYQTKYEELQQTAGRHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQ 540
            +S+ EAE+ YQ+K +ELQ  AG+HGDDL++T+++ISE+NR+IQR+R EI NVKKQC+NL+
Sbjct: 324  KSKAEAEALYQSKIQELQLAAGQHGDDLKHTRNDISELNRLIQRIRCEIANVKKQCSNLE 383

Query: 541  NAIADAEQRGELALKDARNKLAELEDALQKAKQDMARLLREYQELMNTKLALDVEIATYR 720
             AIADAEQRGE ALKDAR KL ELE AL +AK+++AR+LREYQELM+ KLALD+EIATYR
Sbjct: 384  TAIADAEQRGENALKDARAKLDELEGALHQAKEELARMLREYQELMSLKLALDMEIATYR 443

Query: 721  KLLEGEECRLSGEGVGPVNISVVTNT 798
            KLLEGEECR+SGE    V+ISV++++
Sbjct: 444  KLLEGEECRMSGENPSSVSISVISSS 469


>ref|NP_001092053.1| keratin, type II cytoskeletal 2 epidermal [Sus scrofa].
          Length = 642

 Score =  352 bits (903), Expect = 3e-97
 Identities = 176/265 (66%), Positives = 223/265 (84%)
 Frame = +1

Query: 4    ILGERGRLDSELRSMQDLVEDFKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEAK 183
            +  E+   D+EL + QDLVE+F+ KYEDEINKRT AEN+FV LKKDVD AY+NK +L+AK
Sbjct: 254  LCAEKTSQDTELNNQQDLVEEFRKKYEDEINKRTAAENDFVTLKKDVDNAYINKADLQAK 313

Query: 184  VDALMDEINFTKMFFEAELSQMQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIANR 363
            VD L  E+ F K+ F+AELSQMQ +V++T+V+LSMDN+RNLDL+ II+EV++QYE+IA+R
Sbjct: 314  VDVLSQELAFLKILFDAELSQMQQNVTETNVILSMDNSRNLDLNDIISEVQSQYEEIAHR 373

Query: 364  SRTEAESWYQTKYEELQQTAGRHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQN 543
            S+ EAE+ Y +KYEELQ TAG+HGD L+  K EI E+NRMIQRL+AEI  V+KQC N+Q+
Sbjct: 374  SKAEAEALYHSKYEELQITAGKHGDSLKEVKMEICELNRMIQRLQAEISQVRKQCKNVQD 433

Query: 544  AIADAEQRGELALKDARNKLAELEDALQKAKQDMARLLREYQELMNTKLALDVEIATYRK 723
            +IADAEQRGE ALKDA+NKL ELE+ALQKAK+++A LLR+YQELMN KLALDVEIATYRK
Sbjct: 434  SIADAEQRGENALKDAQNKLKELEEALQKAKENLACLLRDYQELMNVKLALDVEIATYRK 493

Query: 724  LLEGEECRLSGEGVGPVNISVVTNT 798
            LLEGEECR+SG+    V +SV ++T
Sbjct: 494  LLEGEECRMSGDLSSNVTMSVTSST 518


  Database: RefSeq49_SP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 11,343,932
  Number of sequences in database:  24,897
  
Lambda     K      H
   0.315    0.130    0.360 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 24,071,459
Number of extensions: 598172
Number of successful extensions: 4116
Number of sequences better than 1.0e-05: 69
Number of HSP's gapped: 3884
Number of HSP's successfully gapped: 71
Length of query: 452
Length of database: 11,343,932
Length adjustment: 102
Effective length of query: 350
Effective length of database: 8,804,438
Effective search space: 3081553300
Effective search space used: 3081553300
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 35 (18.1 bits)

BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-007303
         (1356 letters)

Database: Sscrofa_10.2.fasta 
           4582 sequences; 2,808,509,378 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Sscrofa_Chr05                                                         825   0.0  
Sscrofa_Chr12                                                         100   4e-18
Sscrofa_Chr15                                                          84   2e-13
Sscrofa_Chr04                                                          74   2e-10

>Sscrofa_Chr05 
||          Length = 111506441

 Score =  825 bits (416), Expect = 0.0
 Identities = 450/459 (98%), Gaps = 2/459 (0%)
 Strand = Plus / Plus

                                                                            
Query: 900      aattggtggaggtggtggcagcagctactactccagcagcagcagcgggggtgtaggcct 959
                ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 18371582 aattggtggaggtggtggcagcagctactactccagcagcagcagcgggggcgtaggcct 18371641

                                                                            
Query: 960      tggcggtgggctcagcgtggggggcgctggcttcagttcaagcagtggccgaagcctggg 1019
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18371642 tggcggtgggctcagcgtggggggcgctggcttcagttcaagcagtggccgaagcctggg 18371701

                                                                            
Query: 1020     ctttggcagtggcggaggcagcagctccagtgtcaaatttgtctccaccacctcctcctc 1079
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18371702 ctttggcagtggcggaggcagcagctccagtgtcaaatttgtctccaccacctcctcctc 18371761

                                                                            
Query: 1080     ccggaagagcttcaagagctaagagcctccagcaagtcactgtctcccagctgcagcagc 1139
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18371762 ccggaagagcttcaagagctaagagcctccagcaagtcactgtctcccagctgcagcagc 18371821

                                                                            
Query: 1140     ggctggctatggcgctccctcttctcggtggttgccccaggccagttttctcttttttct 1199
                ||||||||||||||||||||||||||||||||||||| || | |||||||||||||||||
Sbjct: 18371822 ggctggctatggcgctccctcttctcggtggttgcccaagccaagttttctcttttttct 18371881

                                                                            
Query: 1200     gaagcgtagtcaatcaagcctattgcagacccacgttcttgggntcctgg-aggtgcagc 1258
                |||||||||||||||||||||||||||||||||||||||| || |||||| |||||||||
Sbjct: 18371882 gaagcgtagtcaatcaagcctattgcagacccacgttctttggttcctggaaggtgcagc 18371941

                                                                            
Query: 1259     ccccactttctagtcttctgtgtcccgattccacgctctgcttc-aatcagcctttgggt 1317
                ||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||
Sbjct: 18371942 ccccactttctagtcttctgtgtcccgattctacgctctgcttcaaatcagcctttgggt 18372001

                                                       
Query: 1318     ctctacagcctgctctttggagatgaatccaaagttttc 1356
                |||||||||||||||||||||||||||||||||||||||
Sbjct: 18372002 ctctacagcctgctctttggagatgaatccaaagttttc 18372040



 Score =  442 bits (223), Expect = e-121
 Identities = 223/223 (100%)
 Strand = Plus / Plus

                                                                            
Query: 524      agtgcgccaacctgcagaatgccattgctgatgctgagcagcgtggggagctggccctca 583
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18369973 agtgcgccaacctgcagaatgccattgctgatgctgagcagcgtggggagctggccctca 18370032

                                                                            
Query: 584      aggacgccaggaacaagctggccgagctggaggatgccctgcagaaggccaagcaggaca 643
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18370033 aggacgccaggaacaagctggccgagctggaggatgccctgcagaaggccaagcaggaca 18370092

                                                                            
Query: 644      tggcccggctgctgagggagtaccaggagctcatgaacaccaagctggccctggacgtgg 703
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18370093 tggcccggctgctgagggagtaccaggagctcatgaacaccaagctggccctggacgtgg 18370152

                                                           
Query: 704      agatcgccacctacaggaagctgctggagggcgaggagtgcag 746
                |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18370153 agatcgccacctacaggaagctgctggagggcgaggagtgcag 18370195



 Score =  355 bits (179), Expect = 4e-95
 Identities = 212/223 (95%)
 Strand = Plus / Plus

                                                                            
Query: 524      agtgcgccaacctgcagaatgccattgctgatgctgagcagcgtggggagctggccctca 583
                ||||||||| |||||||  |||||| |||||||| ||||||||||||||| |||||||||
Sbjct: 18204570 agtgcgccagcctgcagtctgccatcgctgatgccgagcagcgtggggagatggccctca 18204629

                                                                            
Query: 584      aggacgccaggaacaagctggccgagctggaggatgccctgcagaaggccaagcaggaca 643
                |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18204630 aggatgccaggaacaagctggccgagctggaggatgccctgcagaaggccaagcaggaca 18204689

                                                                            
Query: 644      tggcccggctgctgagggagtaccaggagctcatgaacaccaagctggccctggacgtgg 703
                ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18204690 tggccaggctgctgaaggagtaccaggagctcatgaacaccaagctggccctggacgtgg 18204749

                                                           
Query: 704      agatcgccacctacaggaagctgctggagggcgaggagtgcag 746
                |||| ||||||||||||||||||||||| ||||||||||||||
Sbjct: 18204750 agattgccacctacaggaagctgctggaaggcgaggagtgcag 18204792



 Score =  331 bits (167), Expect = 6e-88
 Identities = 209/223 (93%)
 Strand = Plus / Plus

                                                                            
Query: 524      agtgcgccaacctgcagaatgccattgctgatgctgagcagcgtggggagctggccctca 583
                ||||||||| |||||||  |||||| |||||||| ||||||||||||||| |||||||||
Sbjct: 18186836 agtgcgccagcctgcagtctgccatcgctgatgccgagcagcgtggggagatggccctca 18186895

                                                                            
Query: 584      aggacgccaggaacaagctggccgagctggaggatgccctgcagaaggccaagcaggaca 643
                |||| |||||||||||||||||||||||||||||||||||||  ||||||||||||||||
Sbjct: 18186896 aggatgccaggaacaagctggccgagctggaggatgccctgcttaaggccaagcaggaca 18186955

                                                                            
Query: 644      tggcccggctgctgagggagtaccaggagctcatgaacaccaagctggccctggacgtgg 703
                ||||| ||||||||| |||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 18186956 tggccaggctgctgaaggagtaccaggagctcatgaacgccaagctggccctggacgtgg 18187015

                                                           
Query: 704      agatcgccacctacaggaagctgctggagggcgaggagtgcag 746
                |||| ||||||||||||||||||||||| ||||||||||||||
Sbjct: 18187016 agattgccacctacaggaagctgctggaaggcgaggagtgcag 18187058



 Score =  321 bits (162), Expect = 6e-85
 Identities = 165/166 (99%)
 Strand = Plus / Plus

                                                                            
Query: 234      ggagctgtcccagatgcagacacatgtctcagacacgtctgtggtcctctctatggacaa 293
                |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 18369121 ggagctgtcccagatgcagacacatgtctcagacacatctgtggtcctctctatggacaa 18369180

                                                                            
Query: 294      caaccgcaacctggacctggacagcatcatcgccgaggtcaaggcccagtacgaggacat 353
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18369181 caaccgcaacctggacctggacagcatcatcgccgaggtcaaggcccagtacgaggacat 18369240

                                                              
Query: 354      cgccaaccgcagccgcacggaagccgagtcctggtaccagaccaag 399
                ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18369241 cgccaaccgcagccgcacggaagccgagtcctggtaccagaccaag 18369286



 Score =  270 bits (136), Expect = 2e-69
 Identities = 187/204 (91%)
 Strand = Plus / Plus

                                                                            
Query: 543      tgccattgctgatgctgagcagcgtggggagctggccctcaaggacgccaggaacaagct 602
                |||||||||||| || |||||||||||||||||||||||||||||||||| | |||||||
Sbjct: 18157226 tgccattgctgacgcagagcagcgtggggagctggccctcaaggacgccaagcacaagct 18157285

                                                                            
Query: 603      ggccgagctggaggatgccctgcagaaggccaagcaggacatggcccggctgctgaggga 662
                ||||||||||||||| ||||||||||||||||||||||||||||| || | |||| | ||
Sbjct: 18157286 ggccgagctggaggacgccctgcagaaggccaagcaggacatggcgcgacagctgcgtga 18157345

                                                                            
Query: 663      gtaccaggagctcatgaacaccaagctggccctggacgtggagatcgccacctacaggaa 722
                |||||||||||| ||||||  |||||||||||||||| | ||||||||||||||| | ||
Sbjct: 18157346 gtaccaggagctgatgaacgtcaagctggccctggacatcgagatcgccacctaccgcaa 18157405

                                        
Query: 723      gctgctggagggcgaggagtgcag 746
                ||||||||||||||||||||||||
Sbjct: 18157406 gctgctggagggcgaggagtgcag 18157429



 Score =  270 bits (136), Expect = 2e-69
 Identities = 187/204 (91%)
 Strand = Plus / Minus

                                                                            
Query: 543      tgccattgctgatgctgagcagcgtggggagctggccctcaaggacgccaggaacaagct 602
                |||||||||||| || |||||||||||||||||||||||||||||||||| | |||||||
Sbjct: 18263593 tgccattgctgacgcagagcagcgtggggagctggccctcaaggacgccaagcacaagct 18263534

                                                                            
Query: 603      ggccgagctggaggatgccctgcagaaggccaagcaggacatggcccggctgctgaggga 662
                ||||||||||||||| ||||||||||||||||||||||||||||| || | |||| | ||
Sbjct: 18263533 ggccgagctggaggacgccctgcagaaggccaagcaggacatggcgcgacagctgcgtga 18263474

                                                                            
Query: 663      gtaccaggagctcatgaacaccaagctggccctggacgtggagatcgccacctacaggaa 722
                |||||||||||| ||||||  |||||||||||||||| | ||||||||||||||| | ||
Sbjct: 18263473 gtaccaggagctgatgaacgtcaagctggccctggacatcgagatcgccacctaccgcaa 18263414

                                        
Query: 723      gctgctggagggcgaggagtgcag 746
                ||||||||||||||||||||||||
Sbjct: 18263413 gctgctggagggcgaggagtgcag 18263390



 Score =  254 bits (128), Expect = 1e-64
 Identities = 128/128 (100%)
 Strand = Plus / Plus

                                                                            
Query: 398      agtacgaagagctgcagcagacagctggccggcatggtgatgatctccgcaacaccaagc 457
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18369613 agtacgaagagctgcagcagacagctggccggcatggtgatgatctccgcaacaccaagc 18369672

                                                                            
Query: 458      atgagatctctgaaatgaacaggatgatccagaggctgagagctgagatcgacaacgtca 517
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18369673 atgagatctctgaaatgaacaggatgatccagaggctgagagctgagatcgacaacgtca 18369732

                        
Query: 518      agaagcag 525
                ||||||||
Sbjct: 18369733 agaagcag 18369740



 Score =  230 bits (116), Expect = 2e-57
 Identities = 197/224 (87%)
 Strand = Plus / Minus

                                                                            
Query: 523      cagtgcgccaacctgcagaatgccattgctgatgctgagcagcgtggggagctggccctc 582
                |||||||||| |||||| |  ||||| || || || || |||||||| || |||||||||
Sbjct: 18100184 cagtgcgccagcctgcaaacagccatcgccgacgcagaacagcgtggagaactggccctc 18100125

                                                                            
Query: 583      aaggacgccaggaacaagctggccgagctggaggatgccctgcagaaggccaagcaggac 642
                ||||| ||  ||  ||||||||  || |||||||||||||||||||||||||||||||||
Sbjct: 18100124 aaggatgcacgggccaagctggtggacctggaggatgccctgcagaaggccaagcaggac 18100065

                                                                            
Query: 643      atggcccggctgctgagggagtaccaggagctcatgaacaccaagctggccctggacgtg 702
                ||||| |||||||||   |||||||||||||||||||||| ||||||||| |||||||||
Sbjct: 18100064 atggcacggctgctgcacgagtaccaggagctcatgaacatcaagctggctctggacgtg 18100005

                                                            
Query: 703      gagatcgccacctacaggaagctgctggagggcgaggagtgcag 746
                |||||||||||||||||||||||||| ||||| |||||||||||
Sbjct: 18100004 gagatcgccacctacaggaagctgctagagggagaggagtgcag 18099961



 Score =  230 bits (116), Expect = 2e-57
 Identities = 197/224 (87%)
 Strand = Plus / Minus

                                                                            
Query: 523      cagtgcgccaacctgcagaatgccattgctgatgctgagcagcgtggggagctggccctc 582
                |||||||||| |||||| |  ||||| || || || || |||||||| || |||||||||
Sbjct: 18279154 cagtgcgccagcctgcaaacagccatcgccgacgcagaacagcgtggagaactggccctc 18279095

                                                                            
Query: 583      aaggacgccaggaacaagctggccgagctggaggatgccctgcagaaggccaagcaggac 642
                ||||| ||  ||  ||||||||  || |||||||||||||||||||||||||||||||||
Sbjct: 18279094 aaggatgcacgggccaagctggtggacctggaggatgccctgcagaaggccaagcaggac 18279035

                                                                            
Query: 643      atggcccggctgctgagggagtaccaggagctcatgaacaccaagctggccctggacgtg 702
                ||||| |||||||||   |||||||||||||||||||||| ||||||||| |||||||||
Sbjct: 18279034 atggcacggctgctgcacgagtaccaggagctcatgaacatcaagctggctctggacgtg 18278975

                                                            
Query: 703      gagatcgccacctacaggaagctgctggagggcgaggagtgcag 746
                |||||||||||||||||||||||||| ||||| |||||||||||
Sbjct: 18278974 gagatcgccacctacaggaagctgctagagggagaggagtgcag 18278931



 Score =  194 bits (98), Expect = 9e-47
 Identities = 149/166 (89%)
 Strand = Plus / Minus

                                                                            
Query: 234      ggagctgtcccagatgcagacacatgtctcagacacgtctgtggtcctctctatggacaa 293
                |||||||||||| |||||||||||||||   ||||| || |||||||| || ||||||||
Sbjct: 18281909 ggagctgtcccaaatgcagacacatgtcagcgacacatcggtggtcctgtccatggacaa 18281850

                                                                            
Query: 294      caaccgcaacctggacctggacagcatcatcgccgaggtcaaggcccagtacgaggacat 353
                |||||||| ||||||||||||||||||||||||||||||||| || ||||| ||||||||
Sbjct: 18281849 caaccgcagcctggacctggacagcatcatcgccgaggtcaaagcacagtatgaggacat 18281790

                                                              
Query: 354      cgccaaccgcagccgcacggaagccgagtcctggtaccagaccaag 399
                |||||||||||||||  | || || |||||||||||||||||||||
Sbjct: 18281789 cgccaaccgcagccgggccgaggctgagtcctggtaccagaccaag 18281744



 Score =  188 bits (95), Expect = 5e-45
 Identities = 98/99 (98%)
 Strand = Plus / Plus

                                                                            
Query: 137      aggatgtggacgccgcctacatgaacaaggtggagttggaagccaaggtcgatgcactga 196
                ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 18368423 aggatgtggacgccgcctacatgaacaaggtggagctggaagccaaggtcgatgcactga 18368482

                                                       
Query: 197      tggatgagatcaacttcacgaagatgttctttgaggcgg 235
                |||||||||||||||||||||||||||||||||||||||
Sbjct: 18368483 tggatgagatcaacttcacgaagatgttctttgaggcgg 18368521



 Score =  178 bits (90), Expect = 5e-42
 Identities = 181/206 (87%), Gaps = 4/206 (1%)
 Strand = Plus / Minus

                                                                            
Query: 543      tgccattgctgatgctgagcagcgtggggagctggccctcaaggacgc-caggaacaagc 601
                ||||||||||||||| ||||||||||||||||||||  ||||||| || ||||  |||||
Sbjct: 18664395 tgccattgctgatgccgagcagcgtggggagctggctgtcaaggatgctcaggc-caagc 18664337

                                                                            
Query: 602      tggccgagctggaggatgccctgcagaag-gccaagcaggacatggcccggctgctgagg 660
                |||||||||||||||  |||||| ||||  ||||||||||||||||| |||| |||| | 
Sbjct: 18664336 tggccgagctggaggccgccctg-agaaccgccaagcaggacatggcgcggcagctgcgt 18664278

                                                                            
Query: 661      gagtaccaggagctcatgaacaccaagctggccctggacgtggagatcgccacctacagg 720
                ||||||||||| || |||||   |||||||||||||||||||||||||||||||||| | 
Sbjct: 18664277 gagtaccaggaactgatgaatgtcaagctggccctggacgtggagatcgccacctaccgc 18664218

                                          
Query: 721      aagctgctggagggcgaggagtgcag 746
                |||||||||||||| |||||| ||||
Sbjct: 18664217 aagctgctggagggagaggagagcag 18664192



 Score =  167 bits (84), Expect = 2e-38
 Identities = 132/148 (89%)
 Strand = Plus / Minus

                                                                            
Query: 597      caagctggccgagctggaggatgccctgcagaaggccaagcaggacatggcccggctgct 656
                |||||||| ||||||||||| |||||||||  |||||||| ||||  |||||||| ||||
Sbjct: 18443034 caagctggacgagctggagggtgccctgcaccaggccaaggaggagctggcccggatgct 18442975

                                                                            
Query: 657      gagggagtaccaggagctcatgaacaccaagctggccctggacgtggagatcgccaccta 716
                | | ||||||||||||||||||| ||| ||||||||||||||| | ||||||||||||||
Sbjct: 18442974 gcgcgagtaccaggagctcatgagcacaaagctggccctggacatcgagatcgccaccta 18442915

                                            
Query: 717      caggaagctgctggagggcgaggagtgc 744
                | | ||||||||||||||||||||||||
Sbjct: 18442914 ccgcaagctgctggagggcgaggagtgc 18442887



 Score =  167 bits (84), Expect = 2e-38
 Identities = 180/212 (84%)
 Strand = Plus / Minus

                                                                            
Query: 535      ctgcagaatgccattgctgatgctgagcagcgtggggagctggccctcaaggacgccagg 594
                ||||||| |||| |||||||||||||||||||||||||| ||||||||||||| ||||  
Sbjct: 18571305 ctgcagactgccgttgctgatgctgagcagcgtggggagatggccctcaaggatgccaat 18571246

                                                                            
Query: 595      aacaagctggccgagctggaggatgccctgcagaaggccaagcaggacatggcccggctg 654
                  ||||||    ||||||  || |||||| ||| |||||||| | ||| | |||||||||
Sbjct: 18571245 gccaagctccaagagctgcgggctgccctacagcaggccaaggatgaccttgcccggctg 18571186

                                                                            
Query: 655      ctgagggagtaccaggagctcatgaacaccaagctggccctggacgtggagatcgccacc 714
                ||| | || ||||||||||| |||||   ||||||||||||||| |||||||||||||||
Sbjct: 18571185 ctgcgtgactaccaggagctgatgaatgtcaagctggccctggatgtggagatcgccacc 18571126

                                                
Query: 715      tacaggaagctgctggagggcgaggagtgcag 746
                ||| | ||||| ||||||||||||||||||||
Sbjct: 18571125 taccgcaagctcctggagggcgaggagtgcag 18571094



 Score =  161 bits (81), Expect = 1e-36
 Identities = 168/197 (85%)
 Strand = Plus / Plus

                                                                            
Query: 545      ccattgctgatgctgagcagcgtggggagctggccctcaaggacgccaggaacaagctgg 604
                |||| ||||| ||||||||||  || |||  ||||||||| || |||| |  ||||||||
Sbjct: 18176700 ccatagctgaggctgagcagcagggtgaggcggccctcaacgatgccaagtgcaagctgg 18176759

                                                                            
Query: 605      ccgagctggaggatgccctgcagaaggccaagcaggacatggcccggctgctgagggagt 664
                | | ||||||||| |||||||||||||||||||||||||||||| | ||||| | |||||
Sbjct: 18176760 cagggctggaggaggccctgcagaaggccaagcaggacatggcctgcctgctcaaggagt 18176819

                                                                            
Query: 665      accaggagctcatgaacaccaagctggccctggacgtggagatcgccacctacaggaagc 724
                |||||||| | |||||| ||||||||| ||||||| | ||||||||||||||| ||   |
Sbjct: 18176820 accaggaggtgatgaactccaagctgggcctggacatcgagatcgccacctaccggcgcc 18176879

                                 
Query: 725      tgctggagggcgaggag 741
                |||||||||||||||||
Sbjct: 18176880 tgctggagggcgaggag 18176896



 Score =  161 bits (81), Expect = 1e-36
 Identities = 168/197 (85%)
 Strand = Plus / Minus

                                                                            
Query: 545      ccattgctgatgctgagcagcgtggggagctggccctcaaggacgccaggaacaagctgg 604
                |||| ||||| ||||||||||  || |||  ||||||||| || |||| |  ||||||||
Sbjct: 18245156 ccatagctgaggctgagcagcagggtgaggcggccctcaacgatgccaagtgcaagctgg 18245097

                                                                            
Query: 605      ccgagctggaggatgccctgcagaaggccaagcaggacatggcccggctgctgagggagt 664
                | | ||||||||| |||||||||||||||||||||||||||||| | ||||| | |||||
Sbjct: 18245096 cagggctggaggaggccctgcagaaggccaagcaggacatggcctgcctgctcaaggagt 18245037

                                                                            
Query: 665      accaggagctcatgaacaccaagctggccctggacgtggagatcgccacctacaggaagc 724
                |||||||| | |||||| ||||||||| ||||||| | ||||||||||||||| ||   |
Sbjct: 18245036 accaggaggtgatgaactccaagctgggcctggacatcgagatcgccacctaccggcgcc 18244977

                                 
Query: 725      tgctggagggcgaggag 741
                |||||||||||||||||
Sbjct: 18244976 tgctggagggcgaggag 18244960



 Score =  157 bits (79), Expect = 2e-35
 Identities = 79/79 (100%)
 Strand = Plus / Plus

                                                                            
Query: 1        agcatcctgggggagagaggccgcctggactcagagctgaggagcatgcaggacctggtg 60
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18202193 agcatcctgggggagagaggccgcctggactcagagctgaggagcatgcaggacctggtg 18202252

                                   
Query: 61       gaggacttcaagaacaagt 79
                |||||||||||||||||||
Sbjct: 18202253 gaggacttcaagaacaagt 18202271



 Score =  155 bits (78), Expect = 8e-35
 Identities = 186/222 (83%)
 Strand = Plus / Minus

                                                                            
Query: 523      cagtgcgccaacctgcagaatgccattgctgatgctgagcagcgtggggagctggccctc 582
                |||||| |||||||| |||  |||||||| || || |||||||| |||||    ||||| 
Sbjct: 18409920 cagtgctccaacctggagacagccattgccgacgccgagcagcggggggaaaatgccctg 18409861

                                                                            
Query: 583      aaggacgccaggaacaagctggccgagctggaggatgccctgcagaaggccaagcaggac 642
                ||||| ||| ||  |||||||| ||| ||||||| |||||| ||  |||||||| |||| 
Sbjct: 18409860 aaggatgcccgggccaagctggacgaactggagggtgccctacaccaggccaaggaggag 18409801

                                                                            
Query: 643      atggcccggctgctgagggagtaccaggagctcatgaacaccaagctggccctggacgtg 702
                 |||||||| ||||| ||||||||||||||||||||| |   ||||||||| ||||| ||
Sbjct: 18409800 ctggcccggatgctgcgggagtaccaggagctcatgagcctgaagctggccttggacatg 18409741

                                                          
Query: 703      gagatcgccacctacaggaagctgctggagggcgaggagtgc 744
                ||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 18409740 gagatcgccacctaccgcaagctgctggagggcgaggagtgc 18409699



 Score =  151 bits (76), Expect = 1e-33
 Identities = 163/192 (84%)
 Strand = Plus / Minus

                                                                            
Query: 550      gctgatgctgagcagcgtggggagctggccctcaaggacgccaggaacaagctggccgag 609
                ||||| ||||||||||  || ||| |||||||||| || |||| |  ||||||||| |||
Sbjct: 18088249 gctgaagctgagcagcagggcgaggtggccctcaacgatgccaagtgcaagctggcggag 18088190

                                                                            
Query: 610      ctggaggatgccctgcagaaggccaagcaggacatggcccggctgctgagggagtaccag 669
                |||||||  |||||||||||||||||||||||||||||| | ||| | | ||||||||||
Sbjct: 18088189 ctggaggccgccctgcagaaggccaagcaggacatggcctgcctgatcaaggagtaccag 18088130

                                                                            
Query: 670      gagctcatgaacaccaagctggccctggacgtggagatcgccacctacaggaagctgctg 729
                ||| |  ||||| ||||||||| ||||||| | ||||||||||||||| ||   ||||||
Sbjct: 18088129 gaggtgctgaactccaagctgggcctggacatcgagatcgccacctaccggcgcctgctg 18088070

                            
Query: 730      gagggcgaggag 741
                ||||||||||||
Sbjct: 18088069 gagggcgaggag 18088058



 Score =  151 bits (76), Expect = 1e-33
 Identities = 163/192 (84%)
 Strand = Plus / Plus

                                                                            
Query: 550      gctgatgctgagcagcgtggggagctggccctcaaggacgccaggaacaagctggccgag 609
                ||||| ||||||||||  || ||| |||||||||| || |||| |  ||||||||| |||
Sbjct: 18112857 gctgaagctgagcagcagggcgaggtggccctcaacgatgccaagtgcaagctggcggag 18112916

                                                                            
Query: 610      ctggaggatgccctgcagaaggccaagcaggacatggcccggctgctgagggagtaccag 669
                |||||||  |||||||||||||||||||||||||||||| | ||| | | ||||||||||
Sbjct: 18112917 ctggaggccgccctgcagaaggccaagcaggacatggcctgcctgatcaaggagtaccag 18112976

                                                                            
Query: 670      gagctcatgaacaccaagctggccctggacgtggagatcgccacctacaggaagctgctg 729
                ||| |  ||||| ||||||||| ||||||| | ||||||||||||||| ||   ||||||
Sbjct: 18112977 gaggtgctgaactccaagctgggcctggacatcgagatcgccacctaccggcgcctgctg 18113036

                            
Query: 730      gagggcgaggag 741
                ||||||||||||
Sbjct: 18113037 gagggcgaggag 18113048



 Score =  147 bits (74), Expect = 2e-32
 Identities = 107/118 (90%)
 Strand = Plus / Minus

                                                                            
Query: 629      aggccaagcaggacatggcccggctgctgagggagtaccaggagctcatgaacaccaagc 688
                |||||||| ||||  |||||||  ||||| ||||||||||||||||||||| ||| ||||
Sbjct: 18385610 aggccaaggaggagctggcccgaatgctgcgggagtaccaggagctcatgagcacaaagc 18385551

                                                                          
Query: 689      tggccctggacgtggagatcgccacctacaggaagctgctggagggcgaggagtgcag 746
                ||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||
Sbjct: 18385550 tggccctggacgtggagatcgccacctaccgcaagctgctagagggcgaggagtgcag 18385493



 Score =  145 bits (73), Expect = 7e-32
 Identities = 145/169 (85%)
 Strand = Plus / Minus

                                                                            
Query: 553      gatgctgagcagcgtggggagctggccctcaaggacgccaggaacaagctggccgagctg 612
                ||||| ||||||||||| |||   |||||||| || |||  ||||||||||   ||||||
Sbjct: 18507816 gatgcagagcagcgtggtgagaatgccctcaaagatgcccagaacaagctgaatgagctg 18507757

                                                                            
Query: 613      gaggatgccctgcagaaggccaagcaggacatggcccggctgctgagggagtaccaggag 672
                ||||| |||||||||||||||||| ||||| ||||||| |||||| | || |||||||| 
Sbjct: 18507756 gaggaggccctgcagaaggccaaggaggacctggcccgcctgctgcgtgactaccaggaa 18507697

                                                                 
Query: 673      ctcatgaacaccaagctggccctggacgtggagatcgccacctacagga 721
                || ||||||||||| |||||||||||||||||||| |||||||| ||||
Sbjct: 18507696 ctgatgaacaccaaactggccctggacgtggagattgccacctatagga 18507648



 Score =  145 bits (73), Expect = 7e-32
 Identities = 181/217 (83%)
 Strand = Plus / Minus

                                                                            
Query: 530      ccaacctgcagaatgccattgctgatgctgagcagcgtggggagctggccctcaaggacg 589
                ||||||||||||  ||| | |||||||| |||||||| |||||| |||| |||||||| |
Sbjct: 18542584 ccaacctgcagacggccgtcgctgatgcagagcagcggggggaggtggctctcaaggatg 18542525

                                                                            
Query: 590      ccaggaacaagctggccgagctggaggatgccctgcagaaggccaagcaggacatggccc 649
                |    | ||||||    |||||  ||| |||||||||| | |||||| ||||| ||||||
Sbjct: 18542524 ctgacaccaagcttcaggagctcaaggttgccctgcagcaagccaaggaggacctggccc 18542465

                                                                            
Query: 650      ggctgctgagggagtaccaggagctcatgaacaccaagctggccctggacgtggagatcg 709
                ||||||||| ||||||||||||| | |||||   |||||||||||||||||| |||||||
Sbjct: 18542464 ggctgctgaaggagtaccaggagttgatgaatgtcaagctggccctggacgttgagatcg 18542405

                                                     
Query: 710      ccacctacaggaagctgctggagggcgaggagtgcag 746
                ||||||||||||  || ||||| ||||||||||||||
Sbjct: 18542404 ccacctacaggaccctcctggaaggcgaggagtgcag 18542368



 Score =  143 bits (72), Expect = 3e-31
 Identities = 162/192 (84%)
 Strand = Plus / Plus

                                                                            
Query: 550      gctgatgctgagcagcgtggggagctggccctcaaggacgccaggaacaagctggccgag 609
                ||||| ||||||||||  || ||| |||||||||| || |||| |  ||||||||| |||
Sbjct: 18078912 gctgaagctgagcagcagggcgaggtggccctcaacgatgccaagtgcaagctggcggag 18078971

                                                                            
Query: 610      ctggaggatgccctgcagaaggccaagcaggacatggcccggctgctgagggagtaccag 669
                |||||||  |||||||||||||||||||||||||||||| | ||| | | ||||||||||
Sbjct: 18078972 ctggaggccgccctgcagaaggccaagcaggacatggcctgcctgatcaaggagtaccag 18079031

                                                                            
Query: 670      gagctcatgaacaccaagctggccctggacgtggagatcgccacctacaggaagctgctg 729
                ||| |  ||||| |||||||||  |||||| | ||||||||||||||| ||   ||||||
Sbjct: 18079032 gaggtgctgaactccaagctgggtctggacatcgagatcgccacctaccggcgcctgctg 18079091

                            
Query: 730      gagggcgaggag 741
                ||||||||||||
Sbjct: 18079092 gagggcgaggag 18079103



 Score =  143 bits (72), Expect = 3e-31
 Identities = 120/136 (88%)
 Strand = Plus / Minus

                                                                            
Query: 611      tggaggatgccctgcagaaggccaagcaggacatggcccggctgctgagggagtaccagg 670
                ||||||| ||||||||| |||||||  |||||||||||||||||||| | || |||||||
Sbjct: 18523797 tggaggacgccctgcagcaggccaaagaggacatggcccggctgctgcgcgactaccagg 18523738

                                                                            
Query: 671      agctcatgaacaccaagctggccctggacgtggagatcgccacctacaggaagctgctgg 730
                ||||  ||   ||||||||| || ||||||||||||||||||||||| | ||||||||||
Sbjct: 18523737 agctgctgggaaccaagctgtccttggacgtggagatcgccacctaccgcaagctgctgg 18523678

                                
Query: 731      agggcgaggagtgcag 746
                ||||||||||||||||
Sbjct: 18523677 agggcgaggagtgcag 18523662



 Score =  143 bits (72), Expect = 3e-31
 Identities = 96/104 (92%)
 Strand = Plus / Minus

                                                                            
Query: 265      gacacgtctgtggtcctctctatggacaacaaccgcaacctggacctggacagcatcatc 324
                ||||| || ||||||||||| |||||||||| ||||  ||||||||||||| ||||||||
Sbjct: 18665506 gacacctccgtggtcctctccatggacaacagccgctccctggacctggacggcatcatc 18665447

                                                            
Query: 325      gccgaggtcaaggcccagtacgaggacatcgccaaccgcagccg 368
                |||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 18665446 gccgaggtcaaggcccagtacgaggagatcgccaaccgcagccg 18665403



 Score =  141 bits (71), Expect = 1e-30
 Identities = 77/79 (97%)
 Strand = Plus / Plus

                                                                            
Query: 1        agcatcctgggggagagaggccgcctggactcagagctgaggagcatgcaggacctggtg 60
                ||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 18367201 agcatcctgggagagagaggccgcctggactcagagctgaggaacatgcaggacctggtg 18367260

                                   
Query: 61       gaggacttcaagaacaagt 79
                |||||||||||||||||||
Sbjct: 18367261 gaggacttcaagaacaagt 18367279



 Score =  141 bits (71), Expect = 1e-30
 Identities = 179/215 (83%)
 Strand = Plus / Minus

                                                                            
Query: 530      ccaacctgcagaatgccattgctgatgctgagcagcgtggggagctggccctcaaggacg 589
                |||||||| |||  ||||| |||||||| |||||||| || ||    ||||| ||||| |
Sbjct: 18480165 ccaacctggagacggccatcgctgatgccgagcagcggggagacaacgccctgaaggatg 18480106

                                                                            
Query: 590      ccaggaacaagctggccgagctggaggatgccctgcagaaggccaagcaggacatggccc 649
                || ||  |||||||| ||||||||||| |||||||||  |||||||| | ||  ||||||
Sbjct: 18480105 cccgggccaagctggacgagctggagggtgccctgcaccaggccaaggaagagctggccc 18480046

                                                                            
Query: 650      ggctgctgagggagtaccaggagctcatgaacaccaagctggccctggacgtggagatcg 709
                || ||||| ||||||||||||| ||||||| |   ||||||||| ||||| |||||||||
Sbjct: 18480045 ggatgctgcgggagtaccaggaactcatgagcctgaagctggccttggacatggagatcg 18479986

                                                   
Query: 710      ccacctacaggaagctgctggagggcgaggagtgc 744
                |||||||| | |||||||||||| |||||||||||
Sbjct: 18479985 ccacctaccgcaagctgctggagagcgaggagtgc 18479951



 Score =  139 bits (70), Expect = 4e-30
 Identities = 88/94 (93%)
 Strand = Plus / Plus

                                                                            
Query: 260      tctcagacacgtctgtggtcctctctatggacaacaaccgcaacctggacctggacagca 319
                ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 18203077 tctcagacacgtctgtggtcctctccatggacaacaaccgcaacctggacctggacagca 18203136

                                                  
Query: 320      tcatcgccgaggtcaaggcccagtacgaggacat 353
                ||||||| || ||||| ||||| || ||||||||
Sbjct: 18203137 tcatcgctgaagtcaaagcccaatatgaggacat 18203170



 Score =  139 bits (70), Expect = 4e-30
 Identities = 164/190 (86%), Gaps = 4/190 (2%)
 Strand = Plus / Minus

                                                                            
Query: 553      gatgctgagcagcgtggggagctggccctcaaggacgc-caggaacaagctggccgagct 611
                ||||| ||||| ||||| |||||||||||||||||||| ||||  |||||||| ||||||
Sbjct: 18619009 gatgccgagcatcgtggtgagctggccctcaaggacgctcaggc-caagctggtcgagct 18618951

                                                                            
Query: 612      ggaggatgccctgcagaag-gccaagcaggacatggcccggctgctgagggagtaccagg 670
                |||||  || ||| ||||  |||||||||||| |||| ||||||||| | ||||||||||
Sbjct: 18618950 ggaggccgctctg-agaactgccaagcaggacctggcacggctgctgcgcgagtaccagg 18618892

                                                                            
Query: 671      agctcatgaacaccaagctggccctggacgtggagatcgccacctacaggaagctgctgg 730
                |||| |||| |   |||||||||||||| |||||||||||||||||| | | ||||||||
Sbjct: 18618891 agctgatgagcttgaagctggccctggatgtggagatcgccacctaccgcaggctgctgg 18618832

                          
Query: 731      agggcgagga 740
                ||||||||||
Sbjct: 18618831 agggcgagga 18618822



 Score =  137 bits (69), Expect = 2e-29
 Identities = 126/145 (86%)
 Strand = Plus / Plus

                                                                            
Query: 597      caagctggccgagctggaggatgccctgcagaaggccaagcaggacatggcccggctgct 656
                ||||||||| ||||||||||  |||||||||||||||||||||||||||||| | ||| |
Sbjct: 18033954 caagctggcggagctggaggccgccctgcagaaggccaagcaggacatggcctgcctggt 18034013

                                                                            
Query: 657      gagggagtaccaggagctcatgaacaccaagctggccctggacgtggagatcgccaccta 716
                 | ||||||||||||| |  ||||| ||||||||| ||||||| | ||||||||||||||
Sbjct: 18034014 caaggagtaccaggaggtgctgaactccaagctgggcctggacatcgagatcgccaccta 18034073

                                         
Query: 717      caggaagctgctggagggcgaggag 741
                | ||   ||||||||||||||||||
Sbjct: 18034074 ccggcgcctgctggagggcgaggag 18034098



 Score =  135 bits (68), Expect = 7e-29
 Identities = 161/192 (83%)
 Strand = Plus / Minus

                                                                            
Query: 553      gatgctgagcagcgtggggagctggccctcaaggacgccaggaacaagctggccgagctg 612
                ||||| |||||||||||||||  |||||| ||||| |||   | |||||  || ||||||
Sbjct: 18586433 gatgcagagcagcgtggggaggcggccctaaaggatgcctacagcaagcgtgcagagctg 18586374

                                                                            
Query: 613      gaggatgccctgcagaaggccaagcaggacatggcccggctgctgagggagtaccaggag 672
                |||| ||||||| ||||||||||| ||||  |||||||| ||||| | || |||||||||
Sbjct: 18586373 gaggctgccctgaagaaggccaaggaggagctggcccggatgctgcgtgaataccaggag 18586314

                                                                            
Query: 673      ctcatgaacaccaagctggccctggacgtggagatcgccacctacaggaagctgctggag 732
                || |||| |   ||||||||| ||||| | ||||||||||||||| | ||||||||||||
Sbjct: 18586313 ctgatgagcgtgaagctggccttggacattgagatcgccacctaccgcaagctgctggag 18586254

                            
Query: 733      ggcgaggagtgc 744
                ||||||||||||
Sbjct: 18586253 ggcgaggagtgc 18586242



 Score =  127 bits (64), Expect = 2e-26
 Identities = 112/128 (87%)
 Strand = Plus / Minus

                                                                            
Query: 619      gccctgcagaaggccaagcaggacatggcccggctgctgagggagtaccaggagctcatg 678
                ||||||||  |||||||| ||||| |||||||||||||| | || |||||||  ||||||
Sbjct: 18603928 gccctgcaccaggccaaggaggacctggcccggctgctgcgtgactaccaggccctcatg 18603869

                                                                            
Query: 679      aacaccaagctggccctggacgtggagatcgccacctacaggaagctgctggagggcgag 738
                |||  |||||||||||||||||||||||||||||||||| | |||||||||||| | |||
Sbjct: 18603868 aacgtcaagctggccctggacgtggagatcgccacctaccgaaagctgctggagagtgag 18603809

                        
Query: 739      gagtgcag 746
                ||| ||||
Sbjct: 18603808 gagagcag 18603801



 Score =  125 bits (63), Expect = 7e-26
 Identities = 75/79 (94%)
 Strand = Plus / Minus

                                                                            
Query: 1        agcatcctgggggagagaggccgcctggactcagagctgaggagcatgcaggacctggtg 60
                |||||||||||||||| |||||||||||||||||||||||||| |||||| |||||||||
Sbjct: 18573745 agcatcctgggggagaaaggccgcctggactcagagctgaggaacatgcaagacctggtg 18573686

                                   
Query: 61       gaggacttcaagaacaagt 79
                |||||||||||||| ||||
Sbjct: 18573685 gaggacttcaagaagaagt 18573667



 Score =  123 bits (62), Expect = 3e-25
 Identities = 62/62 (100%)
 Strand = Plus / Plus

                                                                            
Query: 78       gtatgaagatgaaatcaacaagcgtaccacagccgagaatgaatttgtgatgctgaagaa 137
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18368254 gtatgaagatgaaatcaacaagcgtaccacagccgagaatgaatttgtgatgctgaagaa 18368313

                  
Query: 138      gg 139
                ||
Sbjct: 18368314 gg 18368315



 Score =  121 bits (61), Expect = 1e-24
 Identities = 112/129 (86%)
 Strand = Plus / Plus

                                                                            
Query: 271      tctgtggtcctctctatggacaacaaccgcaacctggacctggacagcatcatcgccgag 330
                |||||| |||| || ||||||||||||||||| |||||||| |||||||||||| |||||
Sbjct: 18155540 tctgtgatcctgtccatggacaacaaccgcaagctggacctagacagcatcatctccgag 18155599

                                                                            
Query: 331      gtcaaggcccagtacgaggacatcgccaaccgcagccgcacggaagccgagtcctggtac 390
                |||||||||||||| |||||||| |||||||| || ||  | || || ||||| ||||||
Sbjct: 18155600 gtcaaggcccagtatgaggacattgccaaccgtagtcgggctgaggctgagtcttggtac 18155659

                         
Query: 391      cagaccaag 399
                |||| ||||
Sbjct: 18155660 cagatcaag 18155668



 Score =  121 bits (61), Expect = 1e-24
 Identities = 112/129 (86%)
 Strand = Plus / Minus

                                                                            
Query: 271      tctgtggtcctctctatggacaacaaccgcaacctggacctggacagcatcatcgccgag 330
                |||||| |||| || ||||||||||||||||| |||||||| |||||||||||| |||||
Sbjct: 18265451 tctgtgatcctgtccatggacaacaaccgcaagctggacctagacagcatcatctccgag 18265392

                                                                            
Query: 331      gtcaaggcccagtacgaggacatcgccaaccgcagccgcacggaagccgagtcctggtac 390
                |||||||||||||| |||||||| |||||||| || ||  | || || ||||| ||||||
Sbjct: 18265391 gtcaaggcccagtatgaggacattgccaaccgtagtcgggctgaggctgagtcttggtac 18265332

                         
Query: 391      cagaccaag 399
                |||| ||||
Sbjct: 18265331 cagatcaag 18265323



 Score =  121 bits (61), Expect = 1e-24
 Identities = 103/117 (88%)
 Strand = Plus / Minus

                                                                            
Query: 234      ggagctgtcccagatgcagacacatgtctcagacacgtctgtggtcctctctatggacaa 293
                ||||||||||||||||||||| || |||   ||||||||||||||||| || ||||||||
Sbjct: 18587562 ggagctgtcccagatgcagacccacgtcagtgacacgtctgtggtcctgtccatggacaa 18587503

                                                                         
Query: 294      caaccgcaacctggacctggacagcatcatcgccgaggtcaaggcccagtacgagga 350
                ||||||  ||||||||||||||||||||||||| ||||||   |||||||| |||||
Sbjct: 18587502 caaccgggacctggacctggacagcatcatcgctgaggtccgcgcccagtatgagga 18587446



 Score =  119 bits (60), Expect = 4e-24
 Identities = 120/140 (85%)
 Strand = Plus / Minus

                                                                            
Query: 607      gagctggaggatgccctgcagaaggccaagcaggacatggcccggctgctgagggagtac 666
                ||||||||||| || ||||||||||||||  || || ||||| | |||||| | || |||
Sbjct: 18428310 gagctggaggaagctctgcagaaggccaaagagaacctggcctgcctgctgcgtgactac 18428251

                                                                            
Query: 667      caggagctcatgaacaccaagctggccctggacgtggagatcgccacctacaggaagctg 726
                |||||||| ||||||  |||||||||  |||| |||||||| ||||||||| | ||||||
Sbjct: 18428250 caggagctgatgaacgtcaagctggctttggatgtggagattgccacctaccgcaagctg 18428191

                                    
Query: 727      ctggagggcgaggagtgcag 746
                ||||||||||||||||||||
Sbjct: 18428190 ctggagggcgaggagtgcag 18428171



 Score =  115 bits (58), Expect = 7e-23
 Identities = 124/146 (84%)
 Strand = Plus / Minus

                                                                            
Query: 596      acaagctggccgagctggaggatgccctgcagaaggccaagcaggacatggcccggctgc 655
                |||||||| | ||||||||||  ||||||||||||||||||||||||||||||   ||||
Sbjct: 18133451 acaagctgactgagctggaggcggccctgcagaaggccaagcaggacatggccttcctgc 18133392

                                                                            
Query: 656      tgagggagtaccaggagctcatgaacaccaagctggccctggacgtggagatcgccacct 715
                | | ||||||||||||| | ||||   |||||||||| |||||| | ||||| |||||||
Sbjct: 18133391 tcaaggagtaccaggaggtgatgagttccaagctggctctggacatcgagattgccacct 18133332

                                          
Query: 716      acaggaagctgctggagggcgaggag 741
                || ||   ||||||||||||||||||
Sbjct: 18133331 accggcgcctgctggagggcgaggag 18133306



 Score =  113 bits (57), Expect = 3e-22
 Identities = 102/117 (87%)
 Strand = Plus / Minus

                                                                            
Query: 234      ggagctgtcccagatgcagacacatgtctcagacacgtctgtggtcctctctatggacaa 293
                ||||||||||||||||||||  ||||||   ||||| || || || ||||| ||||||||
Sbjct: 18572346 ggagctgtcccagatgcagagccatgtcagtgacacatccgtcgttctctccatggacaa 18572287

                                                                         
Query: 294      caaccgcaacctggacctggacagcatcatcgccgaggtcaaggcccagtacgagga 350
                ||| |||  |||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 18572286 caatcgcttcctggacctggatagcatcattgccgaggtcaaggcccagtacgagga 18572230



 Score =  111 bits (56), Expect = 1e-21
 Identities = 110/128 (85%)
 Strand = Plus / Minus

                                                                            
Query: 398      agtacgaagagctgcagcagacagctggccggcatggtgatgatctccgcaacaccaagc 457
                |||| ||||||||||||   ||||| || ||||| || || |||||||| |||||||| |
Sbjct: 18100437 agtatgaagagctgcaggtcacagccgggcggcacggcgacgatctccgaaacaccaaac 18100378

                                                                            
Query: 458      atgagatctctgaaatgaacaggatgatccagaggctgagagctgagatcgacaacgtca 517
                | ||||||||||| |  ||| |||||||||||||||||||||| |||||||||| |||||
Sbjct: 18100377 aagagatctctgagacaaaccggatgatccagaggctgagagccgagatcgacagcgtca 18100318

                        
Query: 518      agaagcag 525
                ||||||||
Sbjct: 18100317 agaagcag 18100310



 Score =  111 bits (56), Expect = 1e-21
 Identities = 110/128 (85%)
 Strand = Plus / Minus

                                                                            
Query: 398      agtacgaagagctgcagcagacagctggccggcatggtgatgatctccgcaacaccaagc 457
                |||| ||||||||||||   ||||| || ||||| || || |||||||| |||||||| |
Sbjct: 18279407 agtatgaagagctgcaggtcacagccgggcggcacggcgacgatctccgaaacaccaaac 18279348

                                                                            
Query: 458      atgagatctctgaaatgaacaggatgatccagaggctgagagctgagatcgacaacgtca 517
                | ||||||||||| |  ||| |||||||||||||||||||||| |||||||||| |||||
Sbjct: 18279347 aagagatctctgagacaaaccggatgatccagaggctgagagccgagatcgacagcgtca 18279288

                        
Query: 518      agaagcag 525
                ||||||||
Sbjct: 18279287 agaagcag 18279280



 Score =  107 bits (54), Expect = 2e-20
 Identities = 138/166 (83%)
 Strand = Plus / Plus

                                                                            
Query: 576      ggccctcaaggacgccaggaacaagctggccgagctggaggatgccctgcagaaggccaa 635
                ||||||||| || |||| || ||||||||| || || ||||  ||||| ||| |||||||
Sbjct: 18013640 ggccctcaatgatgccaagagcaagctggcagatctagagggcgcccttcagcaggccaa 18013699

                                                                            
Query: 636      gcaggacatggcccggctgctgagggagtaccaggagctcatgaacaccaagctggccct 695
                |||||||||||| || | |||| | |||||||||||||| |||||   |||| |||||||
Sbjct: 18013700 gcaggacatggcgcgccagctgcgtgagtaccaggagctgatgaatgtcaagttggccct 18013759

                                                              
Query: 696      ggacgtggagatcgccacctacaggaagctgctggagggcgaggag 741
                |||| | ||||||||||||||||||   ||||| || |||||||||
Sbjct: 18013760 ggacatcgagatcgccacctacaggcgcctgctagaaggcgaggag 18013805



 Score =  101 bits (51), Expect = 1e-18
 Identities = 63/67 (94%)
 Strand = Plus / Minus

                                                                            
Query: 278      tcctctctatggacaacaaccgcaacctggacctggacagcatcatcgccgaggtcaagg 337
                ||||||| |||||||||||||||||||| |||||||||||||||||||| ||||| ||||
Sbjct: 18605640 tcctctccatggacaacaaccgcaaccttgacctggacagcatcatcgctgaggttaagg 18605581

                       
Query: 338      cccagta 344
                |||||||
Sbjct: 18605580 cccagta 18605574



 Score = 97.6 bits (49), Expect = 2e-17
 Identities = 73/81 (90%)
 Strand = Plus / Plus

                                                                            
Query: 661      gagtaccaggagctcatgaacaccaagctggccctggacgtggagatcgccacctacagg 720
                ||||||||||||||| | |||  |||| ||||||||||| | ||||||||||||||| ||
Sbjct: 15694018 gagtaccaggagctcctcaacgtcaagatggccctggacatcgagatcgccacctaccgg 15694077

                                     
Query: 721      aagctgctggagggcgaggag 741
                |||||||||||||||||||||
Sbjct: 15694078 aagctgctggagggcgaggag 15694098



 Score = 97.6 bits (49), Expect = 2e-17
 Identities = 121/145 (83%)
 Strand = Plus / Minus

                                                                            
Query: 597      caagctggccgagctggaggatgccctgcagaaggccaagcaggacatggcccggctgct 656
                ||||||||| || |||||||  |||||||||||||||| ||||||||||||| | ||| |
Sbjct: 18047609 caagctggcggacctggaggccgccctgcagaaggccaggcaggacatggcctgcctggt 18047550

                                                                            
Query: 657      gagggagtaccaggagctcatgaacaccaagctggccctggacgtggagatcgccaccta 716
                 | ||||||||||||| |  ||||| ||||||||| |||| | ||||||||||| || ||
Sbjct: 18047549 caaggagtaccaggaggtgctgaactccaagctgggcctgcatgtggagatcgctactta 18047490

                                         
Query: 717      caggaagctgctggagggcgaggag 741
                | | || || |||||||| ||||||
Sbjct: 18047489 ccgcaaactcctggagggtgaggag 18047465



 Score = 91.7 bits (46), Expect = 9e-16
 Identities = 124/150 (82%)
 Strand = Plus / Minus

                                                                            
Query: 597      caagctggccgagctggaggatgccctgcagaaggccaagcaggacatggcccggctgct 656
                ||||||||||  ||||||||  ||| |||||  |||||||||||||||||  |||| |||
Sbjct: 18124095 caagctggcctggctggaggccgccttgcagcgggccaagcaggacatggtgcggcagct 18124036

                                                                            
Query: 657      gagggagtaccaggagctcatgaacaccaagctggccctggacgtggagatcgccaccta 716
                | | |||||||||||||||||||    || ||||| ||||||  | ||||||||||| ||
Sbjct: 18124035 gcgtgagtaccaggagctcatgattgtcaggctgggcctggattttgagatcgccactta 18123976

                                              
Query: 717      caggaagctgctggagggcgaggagtgcag 746
                | | |||||||||||| |||||||| ||||
Sbjct: 18123975 ccgcaagctgctggagagcgaggagagcag 18123946



 Score = 87.7 bits (44), Expect = 1e-14
 Identities = 92/108 (85%)
 Strand = Plus / Plus

                                                                            
Query: 418      acagctggccggcatggtgatgatctccgcaacaccaagcatgagatctctgaaatgaac 477
                ||||| ||| |||| || ||||| || |||||||||||||| |||||||| || || |||
Sbjct: 18185973 acagcgggcaggcacggagatgacctgcgcaacaccaagcaggagatctccgagatcaac 18186032

                                                                
Query: 478      aggatgatccagaggctgagagctgagatcgacaacgtcaagaagcag 525
                 | ||||||||||||||| |  ||||||||||| ||||||||||||||
Sbjct: 18186033 cgcatgatccagaggctgcggtctgagatcgaccacgtcaagaagcag 18186080



 Score = 87.7 bits (44), Expect = 1e-14
 Identities = 92/108 (85%)
 Strand = Plus / Plus

                                                                            
Query: 418      acagctggccggcatggtgatgatctccgcaacaccaagcatgagatctctgaaatgaac 477
                ||||| ||| |||| || ||||| || |||||||||||||| |||||||| || || |||
Sbjct: 18203707 acagcgggcaggcacggagatgacctgcgcaacaccaagcaggagatctccgagatcaac 18203766

                                                                
Query: 478      aggatgatccagaggctgagagctgagatcgacaacgtcaagaagcag 525
                 | ||||||||||||||| |  ||||||||||| ||||||||||||||
Sbjct: 18203767 cgcatgatccagaggctgcggtctgagatcgaccacgtcaagaagcag 18203814



 Score = 87.7 bits (44), Expect = 1e-14
 Identities = 65/72 (90%)
 Strand = Plus / Minus

                                                                            
Query: 286      atggacaacaaccgcaacctggacctggacagcatcatcgccgaggtcaaggcccagtac 345
                ||||||||||||||  |||||||||||||||||||||| |||||||||   |||||||| 
Sbjct: 18413361 atggacaacaaccgggacctggacctggacagcatcattgccgaggtccgcgcccagtat 18413302

                            
Query: 346      gaggacatcgcc 357
                ||||||||||||
Sbjct: 18413301 gaggacatcgcc 18413290



 Score = 87.7 bits (44), Expect = 1e-14
 Identities = 71/80 (88%)
 Strand = Plus / Minus

                                                                            
Query: 278      tcctctctatggacaacaaccgcaacctggacctggacagcatcatcgccgaggtcaagg 337
                ||||||| ||||||||||| || | ||||||||||||||||||||| || |||||| | |
Sbjct: 18446552 tcctctccatggacaacaatcggagcctggacctggacagcatcattgcggaggtccaag 18446493

                                    
Query: 338      cccagtacgaggacatcgcc 357
                ||||||||||||| ||||||
Sbjct: 18446492 cccagtacgaggagatcgcc 18446473



 Score = 83.8 bits (42), Expect = 2e-13
 Identities = 78/90 (86%)
 Strand = Plus / Minus

                                                                            
Query: 265      gacacgtctgtggtcctctctatggacaacaaccgcaacctggacctggacagcatcatc 324
                |||||||| ||  |||| || ||||||||||||||  |||||||||||||||||||||||
Sbjct: 18389396 gacacgtccgtcatcctgtccatggacaacaaccgggacctggacctggacagcatcatc 18389337

                                              
Query: 325      gccgaggtcaaggcccagtacgaggacatc 354
                || ||||||   |||||||| |||||||||
Sbjct: 18389336 gctgaggtccgtgcccagtatgaggacatc 18389307



 Score = 81.8 bits (41), Expect = 9e-13
 Identities = 68/77 (88%)
 Strand = Plus / Minus

                                                                            
Query: 137      aggatgtggacgccgcctacatgaacaaggtggagttggaagccaaggtcgatgcactga 196
                |||||||||| || |||||||||||||||||||||||||| |||||||| ||||  || |
Sbjct: 18588213 aggatgtggatgctgcctacatgaacaaggtggagttggaggccaaggtggatggcctta 18588154

                                 
Query: 197      tggatgagatcaacttc 213
                  |||||||||||||||
Sbjct: 18588153 atgatgagatcaacttc 18588137



 Score = 79.8 bits (40), Expect = 4e-12
 Identities = 58/64 (90%)
 Strand = Plus / Minus

                                                                            
Query: 278      tcctctctatggacaacaaccgcaacctggacctggacagcatcatcgccgaggtcaagg 337
                ||||||| ||||||||||||||| ||||||||||| |||||||||||| ||| ||||| |
Sbjct: 18508825 tcctctccatggacaacaaccgccacctggacctgaacagcatcatcgacgaagtcaaag 18508766

                    
Query: 338      ccca 341
                ||||
Sbjct: 18508765 ccca 18508762



 Score = 77.8 bits (39), Expect = 1e-11
 Identities = 45/47 (95%)
 Strand = Plus / Minus

                                                               
Query: 33       agagctgaggagcatgcaggacctggtggaggacttcaagaacaagt 79
                |||||||| ||||||||||||| ||||||||||||||||||||||||
Sbjct: 18090931 agagctgaagagcatgcaggacgtggtggaggacttcaagaacaagt 18090885



 Score = 77.8 bits (39), Expect = 1e-11
 Identities = 45/47 (95%)
 Strand = Plus / Minus

                                                               
Query: 33       agagctgaggagcatgcaggacctggtggaggacttcaagaacaagt 79
                |||||||| ||||||||||||| ||||||||||||||||||||||||
Sbjct: 18270256 agagctgaagagcatgcaggacgtggtggaggacttcaagaacaagt 18270210



 Score = 75.8 bits (38), Expect = 6e-11
 Identities = 38/38 (100%)
 Strand = Plus / Plus

                                                      
Query: 744      cagattgagtggagaaggtgttggaccagtcaatatct 781
                ||||||||||||||||||||||||||||||||||||||
Sbjct: 18370971 cagattgagtggagaaggtgttggaccagtcaatatct 18371008



 Score = 75.8 bits (38), Expect = 6e-11
 Identities = 59/66 (89%)
 Strand = Plus / Minus

                                                                            
Query: 268      acgtctgtggtcctctctatggacaacaaccgcaacctggacctggacagcatcatcgcc 327
                ||||| || ||||| || ||||||||||||||  ||||||||||||||||||||||||| 
Sbjct: 18544557 acgtccgtagtcctgtccatggacaacaaccgggacctggacctggacagcatcatcgct 18544498

                      
Query: 328      gaggtc 333
                ||||||
Sbjct: 18544497 gaggtc 18544492



 Score = 71.9 bits (36), Expect = 9e-10
 Identities = 63/72 (87%)
 Strand = Plus / Minus

                                                                            
Query: 286      atggacaacaaccgcaacctggacctggacagcatcatcgccgaggtcaaggcccagtac 345
                ||||||||||||||  ||||| || ||||||||||||||| |||||||   |||||||||
Sbjct: 18482219 atggacaacaaccgtgacctgaacttggacagcatcatcgacgaggtccgtgcccagtac 18482160

                            
Query: 346      gaggacatcgcc 357
                ||||| ||||||
Sbjct: 18482159 gaggagatcgcc 18482148



 Score = 69.9 bits (35), Expect = 3e-09
 Identities = 50/55 (90%)
 Strand = Plus / Minus

                                                                       
Query: 25       ctggactcagagctgaggagcatgcaggacctggtggaggacttcaagaacaagt 79
                |||||||| || ||||||| |||||||||||| || |||||||||||||||||||
Sbjct: 18610643 ctggactctgaactgaggaacatgcaggacctcgttgaggacttcaagaacaagt 18610589



 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 76/90 (84%)
 Strand = Plus / Plus

                                                                            
Query: 304      ctggacctggacagcatcatcgccgaggtcaaggcccagtacgaggacatcgccaaccgc 363
                |||||| ||||  ||||||| |||||| |||||||||||||||| || ||||||| ||||
Sbjct: 18171488 ctggacgtggatggcatcattgccgagatcaaggcccagtacgacgaaatcgccagccgc 18171547

                                              
Query: 364      agccgcacggaagccgagtcctggtaccag 393
                |||    ||||||| ||| |||||||||||
Sbjct: 18171548 agcaaagcggaagcagaggcctggtaccag 18171577



 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 76/90 (84%)
 Strand = Plus / Minus

                                                                            
Query: 304      ctggacctggacagcatcatcgccgaggtcaaggcccagtacgaggacatcgccaaccgc 363
                |||||| ||||  ||||||| |||||| |||||||||||||||| || ||||||| ||||
Sbjct: 18250360 ctggacgtggatggcatcattgccgagatcaaggcccagtacgacgaaatcgccagccgc 18250301

                                              
Query: 364      agccgcacggaagccgagtcctggtaccag 393
                |||    ||||||| ||| |||||||||||
Sbjct: 18250300 agcaaagcggaagcagaggcctggtaccag 18250271



 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 46/50 (92%)
 Strand = Plus / Minus

                                                                  
Query: 25       ctggactcagagctgaggagcatgcaggacctggtggaggacttcaagaa 74
                |||||||||||||||||||||| || |||| |||||||||||| ||||||
Sbjct: 18449019 ctggactcagagctgaggagcacgcgggacatggtggaggactacaagaa 18448970



 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 67/78 (85%)
 Strand = Plus / Minus

                                                                            
Query: 448      aacaccaagcatgagatctctgaaatgaacaggatgatccagaggctgagagctgagatc 507
                ||||||||| ||||||| || ||  | ||||||||||||||||||||| | |||||||| 
Sbjct: 18586951 aacaccaagaatgagatttcagagcttaacaggatgatccagaggctgcgggctgagatt 18586892

                                  
Query: 508      gacaacgtcaagaagcag 525
                || ||| |||||||||||
Sbjct: 18586891 gaaaacatcaagaagcag 18586874



 Score = 65.9 bits (33), Expect = 5e-08
 Identities = 45/49 (91%)
 Strand = Plus / Plus

                                                                 
Query: 137      aggatgtggacgccgcctacatgaacaaggtggagttggaagccaaggt 185
                |||| ||||| ||||||||||||| ||||||||||||||| ||||||||
Sbjct: 18154011 aggacgtggatgccgcctacatgagcaaggtggagttggaggccaaggt 18154059



 Score = 65.9 bits (33), Expect = 5e-08
 Identities = 45/49 (91%)
 Strand = Plus / Minus

                                                                 
Query: 137      aggatgtggacgccgcctacatgaacaaggtggagttggaagccaaggt 185
                |||| ||||| ||||||||||||| ||||||||||||||| ||||||||
Sbjct: 18266980 aggacgtggatgccgcctacatgagcaaggtggagttggaggccaaggt 18266932



 Score = 65.9 bits (33), Expect = 5e-08
 Identities = 66/77 (85%)
 Strand = Plus / Minus

                                                                            
Query: 137      aggatgtggacgccgcctacatgaacaaggtggagttggaagccaaggtcgatgcactga 196
                |||||||||| || ||||||||||||||| ||||| |||| ||||||||| |  | ||||
Sbjct: 18282822 aggatgtggatgctgcctacatgaacaagatggagctggaggccaaggtcaactctctga 18282763

                                 
Query: 197      tggatgagatcaacttc 213
                  |||||||||||||||
Sbjct: 18282762 ctgatgagatcaacttc 18282746



 Score = 61.9 bits (31), Expect = 8e-07
 Identities = 34/35 (97%)
 Strand = Plus / Minus

                                                   
Query: 45       catgcaggacctggtggaggacttcaagaacaagt 79
                |||||||| ||||||||||||||||||||||||||
Sbjct: 18667872 catgcagggcctggtggaggacttcaagaacaagt 18667838



 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 54/62 (87%)
 Strand = Plus / Plus

                                                                            
Query: 78       gtatgaagatgaaatcaacaagcgtaccacagccgagaatgaatttgtgatgctgaagaa 137
                ||||||||| || ||||||||||| ||  | |||||||||||||||||||  ||||||||
Sbjct: 18202612 gtatgaagacgagatcaacaagcgcacagcggccgagaatgaatttgtgaatctgaagaa 18202671

                  
Query: 138      gg 139
                ||
Sbjct: 18202672 gg 18202673



 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 45/50 (90%)
 Strand = Plus / Minus

                                                                  
Query: 25       ctggactcagagctgaggagcatgcaggacctggtggaggacttcaagaa 74
                ||||||||||||||||||||| |||  ||| |||||||||||| ||||||
Sbjct: 18394954 ctggactcagagctgaggagcgtgcgagacgtggtggaggactacaagaa 18394905



 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 45/50 (90%)
 Strand = Plus / Minus

                                                                  
Query: 25       ctggactcagagctgaggagcatgcaggacctggtggaggacttcaagaa 74
                |||||||| |||||||  | ||||||||||||||||||||||| ||||||
Sbjct: 18415258 ctggactcggagctgaaaatcatgcaggacctggtggaggactacaagaa 18415209


>Sscrofa_Chr12 
||          Length = 63588571

 Score = 99.6 bits (50), Expect = 4e-18
 Identities = 74/82 (90%)
 Strand = Plus / Plus

                                                                            
Query: 660      ggagtaccaggagctcatgaacaccaagctggccctggacgtggagatcgccacctacag 719
                |||||||||||||||  | |||   ||||||||||||||| | |||||||||||||||||
Sbjct: 18705893 ggagtaccaggagctgctcaacgttaagctggccctggacatcgagatcgccacctacag 18705952

                                      
Query: 720      gaagctgctggagggcgaggag 741
                ||||||||||||||||||||||
Sbjct: 18705953 gaagctgctggagggcgaggag 18705974


>Sscrofa_Chr15 
||          Length = 157681621

 Score = 83.8 bits (42), Expect = 2e-13
 Identities = 54/58 (93%)
 Strand = Plus / Plus

                                                                           
Query: 684       caagctggccctggacgtggagatcgccacctacaggaagctgctggagggcgaggag 741
                 |||| |||||||||| |||||||| ||||||||| |||||||||||||||||||||||
Sbjct: 134563417 caagatggccctggatgtggagattgccacctaccggaagctgctggagggcgaggag 134563474


>Sscrofa_Chr04 
||          Length = 143465943

 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 70/81 (86%)
 Strand = Plus / Minus

                                                                             
Query: 661       gagtaccaggagctcatgaacaccaagctggccctggacgtggagatcgccacctacagg 720
                 ||||||||||||||  || ||| |||||||||||||||| ||||||||  | ||||| | 
Sbjct: 102645419 gagtaccaggagctgctggacatcaagctggccctggacatggagatccacgcctaccgc 102645360

                                      
Query: 721       aagctgctggagggcgaggag 741
                 ||||| |||||||||||||||
Sbjct: 102645359 aagctcctggagggcgaggag 102645339


  Database: Sscrofa_10.2.fasta
    Posted date:  Nov 16, 2011 10:34 AM
  Number of letters in database: 2,808,509,378
  Number of sequences in database:  4582
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 35,008,857
Number of extensions: 378
Number of successful extensions: 378
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 371
Number of HSP's successfully gapped: 77
Length of query: 1356
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1335
Effective length of database: 2,808,413,156
Effective search space: 3749231563260
Effective search space used: 3749231563260
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)