Animal-Genome cDNA 20110601C-007305

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-007305
         (1830 letters)

Database: RefSeq49_BP.fasta 
           33,088 sequences; 17,681,374 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001008663.1| keratin, type II cytoskeletal 5 [Bos taurus].     697   0.0  
Alignment   gi|NP_001076979.1| keratin 6A [Bos taurus].                          651   0.0  
Alignment   gi|XP_002687297.1| PREDICTED: keratin 6C isoform 2 [Bos taurus].     650   0.0  
Alignment   gi|XP_002687296.1| PREDICTED: keratin 6C isoform 1 [Bos taurus].     650   0.0  
Alignment   gi|XP_872255.1| PREDICTED: keratin 6C isoform 2 [Bos taurus].        650   0.0  
Alignment   gi|XP_884760.1| PREDICTED: keratin 6C isoform 3 [Bos taurus].        650   0.0  
Alignment   gi|XP_002687295.1| PREDICTED: cytokeratin type II, component IV...   649   0.0  
Alignment   gi|XP_002687294.1| PREDICTED: cytokeratin type II, component IV...   649   0.0  
Alignment   gi|XP_001789677.1| PREDICTED: keratin 6A-like [Bos taurus].          649   0.0  
Alignment   gi|XP_869322.1| PREDICTED: cytokeratin type II, component IV is...   649   0.0  

>ref|NP_001008663.1| keratin, type II cytoskeletal 5 [Bos taurus].
          Length = 601

 Score =  697 bits (1798), Expect = 0.0
 Identities = 355/365 (97%), Positives = 361/365 (98%)
 Frame = +2

Query: 572  PVCPPGGIQEVTVNQSLLTPLNLQIDPTIQRVRTEEREQIKTLNNKFASFIDKVRFLEQQ 751
            PVCPPGGIQEVTVNQSLLTPLNLQIDPTIQRVRTEEREQIKTLNNKFASFIDKVRFLEQQ
Sbjct: 134  PVCPPGGIQEVTVNQSLLTPLNLQIDPTIQRVRTEEREQIKTLNNKFASFIDKVRFLEQQ 193

Query: 752  NKVLDTKWTLLQEQGTKTVRQNLEPLFEQYINNLRRQLDSILGERGRLDSELRNMQDLVE 931
            NKVLDTKW LLQEQGTKTVRQNLEPL EQYINNLRRQLD I+GERGRLDSELRNMQDLVE
Sbjct: 194  NKVLDTKWALLQEQGTKTVRQNLEPLLEQYINNLRRQLDGIVGERGRLDSELRNMQDLVE 253

Query: 932  DFKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEAKVDALMDEINFTKMFFEAELS 1111
            DFKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEAKVDALMDEINF KMFF+AELS
Sbjct: 254  DFKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEAKVDALMDEINFMKMFFDAELS 313

Query: 1112 QMQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIANRSRTEAESWYQTKYEELQQTA 1291
            QMQTHVSDTSVVLSMDNNR+LDLDSIIAEVKAQYEDIANRSRTEAESWYQTKYEELQQTA
Sbjct: 314  QMQTHVSDTSVVLSMDNNRSLDLDSIIAEVKAQYEDIANRSRTEAESWYQTKYEELQQTA 373

Query: 1292 GRHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQNAIADAEQRGELALKDARNKL 1471
            GRHGDDLRNTKHEISEMNRMIQRLR+EIDNVKKQCANLQNAIADAEQRGELALKDAR+KL
Sbjct: 374  GRHGDDLRNTKHEISEMNRMIQRLRSEIDNVKKQCANLQNAIADAEQRGELALKDARSKL 433

Query: 1472 AELEDALQKAKQDMARLLREYQELMNTKLALDVEIATYRKLLEGEECKLSGEGVGPVNIS 1651
            AELEDALQKAKQDMARLLREYQELMNTKLALDVEIATYRKLLEGEEC+LSGEGVGPVNIS
Sbjct: 434  AELEDALQKAKQDMARLLREYQELMNTKLALDVEIATYRKLLEGEECRLSGEGVGPVNIS 493

Query: 1652 VVTNT 1666
            VVTNT
Sbjct: 494  VVTNT 498



 Score = 65.9 bits (159), Expect = 1e-10
 Identities = 40/76 (52%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
 Frame = +2

Query: 161 MSRQSSVSLRTGGSRSFSAASAITPXXXXXXXXXXXXXXXXXXXXXXXXXXX-ACGVGGY 337
           MSRQS+VS R+GG RSFS ASAITP                            A G GG+
Sbjct: 1   MSRQSTVSFRSGGGRSFSTASAITPSVSRTSFTSVSRSGGGGGGGFGRVSLGGAYGAGGF 60

Query: 338 GSRSLYNLGGSKRISI 385
           GSRSLYNLGGSKRISI
Sbjct: 61  GSRSLYNLGGSKRISI 76


>ref|NP_001076979.1| keratin 6A [Bos taurus].
          Length = 571

 Score =  651 bits (1679), Expect = 0.0
 Identities = 331/364 (90%), Positives = 350/364 (96%)
 Frame = +2

Query: 575  VCPPGGIQEVTVNQSLLTPLNLQIDPTIQRVRTEEREQIKTLNNKFASFIDKVRFLEQQN 754
            VCPPGGIQEVTVNQSLLTPLNLQIDPTIQRVRTEEREQIKTLNNKFASFIDKVRFLEQQN
Sbjct: 129  VCPPGGIQEVTVNQSLLTPLNLQIDPTIQRVRTEEREQIKTLNNKFASFIDKVRFLEQQN 188

Query: 755  KVLDTKWTLLQEQGTKTVRQNLEPLFEQYINNLRRQLDSILGERGRLDSELRNMQDLVED 934
            KVLDTKWTLLQEQGTKTVRQNLEPLFEQYINNLRRQLDSILGERGRLDSELR MQD VED
Sbjct: 189  KVLDTKWTLLQEQGTKTVRQNLEPLFEQYINNLRRQLDSILGERGRLDSELRGMQDTVED 248

Query: 935  FKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEAKVDALMDEINFTKMFFEAELSQ 1114
            FKNKYEDEINKRT AENEFV LKKDVDAAYMNKVEL+AKVDAL DEINF + F++AEL+Q
Sbjct: 249  FKNKYEDEINKRTVAENEFVNLKKDVDAAYMNKVELQAKVDALTDEINFLRTFYDAELAQ 308

Query: 1115 MQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIANRSRTEAESWYQTKYEELQQTAG 1294
            MQTH+SDTSVVLSMDNNRNLDLDSIIAEVKAQYE+IA RSR EAESWYQ+KYEELQ TAG
Sbjct: 309  MQTHISDTSVVLSMDNNRNLDLDSIIAEVKAQYEEIAQRSRAEAESWYQSKYEELQVTAG 368

Query: 1295 RHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQNAIADAEQRGELALKDARNKLA 1474
            RHGDDLRNTK EISE+NR+IQRLR+EID+VKKQCA+LQ+AIADAEQRGELALKDAR+KLA
Sbjct: 369  RHGDDLRNTKQEISEINRVIQRLRSEIDHVKKQCASLQSAIADAEQRGELALKDARSKLA 428

Query: 1475 ELEDALQKAKQDMARLLREYQELMNTKLALDVEIATYRKLLEGEECKLSGEGVGPVNISV 1654
            +LEDALQKAKQDMARLL+EYQELMN KLALDVEIATYRKLLEGEEC+LSGEGVG VNISV
Sbjct: 429  DLEDALQKAKQDMARLLKEYQELMNVKLALDVEIATYRKLLEGEECRLSGEGVGQVNISV 488

Query: 1655 VTNT 1666
            V +T
Sbjct: 489  VQST 492


>ref|XP_002687297.1| PREDICTED: keratin 6C isoform 2 [Bos taurus].
          Length = 549

 Score =  650 bits (1676), Expect = 0.0
 Identities = 330/365 (90%), Positives = 349/365 (95%)
 Frame = +2

Query: 572  PVCPPGGIQEVTVNQSLLTPLNLQIDPTIQRVRTEEREQIKTLNNKFASFIDKVRFLEQQ 751
            PVCPPGGIQEVTVNQSLLTPLNLQIDPTIQRVRTEEREQIKTLNNKFASFIDKVRFLEQQ
Sbjct: 106  PVCPPGGIQEVTVNQSLLTPLNLQIDPTIQRVRTEEREQIKTLNNKFASFIDKVRFLEQQ 165

Query: 752  NKVLDTKWTLLQEQGTKTVRQNLEPLFEQYINNLRRQLDSILGERGRLDSELRNMQDLVE 931
            NKVLDTKWTLLQEQGT+TVRQNLEPLFEQYINNLRRQLDSILGERGRLDSELR MQD VE
Sbjct: 166  NKVLDTKWTLLQEQGTRTVRQNLEPLFEQYINNLRRQLDSILGERGRLDSELRGMQDTVE 225

Query: 932  DFKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEAKVDALMDEINFTKMFFEAELS 1111
            DFKNKYEDEINKRT AENEFV LKKDVD AYMNKVEL+AKVDAL DEINF + F++AEL+
Sbjct: 226  DFKNKYEDEINKRTAAENEFVKLKKDVDIAYMNKVELQAKVDALTDEINFLRTFYDAELA 285

Query: 1112 QMQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIANRSRTEAESWYQTKYEELQQTA 1291
            QMQTH+SDTSVVLSMDNNRNLDLDSIIAEVKAQYE+IA RSR EAESWYQ+KYEEL+ TA
Sbjct: 286  QMQTHISDTSVVLSMDNNRNLDLDSIIAEVKAQYEEIAQRSRAEAESWYQSKYEELRVTA 345

Query: 1292 GRHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQNAIADAEQRGELALKDARNKL 1471
            GRHGDDLRNTK EISE+NR+IQRLR+EID+VKKQCA+LQ+AIADAEQRGELALKDARNKL
Sbjct: 346  GRHGDDLRNTKQEISEINRVIQRLRSEIDHVKKQCASLQSAIADAEQRGELALKDARNKL 405

Query: 1472 AELEDALQKAKQDMARLLREYQELMNTKLALDVEIATYRKLLEGEECKLSGEGVGPVNIS 1651
            A LEDALQKAKQDMARLL+EYQELMN KLALDVEIATYRKLLEGEEC+LSGEGVG VNIS
Sbjct: 406  AGLEDALQKAKQDMARLLKEYQELMNVKLALDVEIATYRKLLEGEECRLSGEGVGQVNIS 465

Query: 1652 VVTNT 1666
            VV +T
Sbjct: 466  VVQST 470


>ref|XP_002687296.1| PREDICTED: keratin 6C isoform 1 [Bos taurus].
          Length = 571

 Score =  650 bits (1676), Expect = 0.0
 Identities = 330/365 (90%), Positives = 349/365 (95%)
 Frame = +2

Query: 572  PVCPPGGIQEVTVNQSLLTPLNLQIDPTIQRVRTEEREQIKTLNNKFASFIDKVRFLEQQ 751
            PVCPPGGIQEVTVNQSLLTPLNLQIDPTIQRVRTEEREQIKTLNNKFASFIDKVRFLEQQ
Sbjct: 128  PVCPPGGIQEVTVNQSLLTPLNLQIDPTIQRVRTEEREQIKTLNNKFASFIDKVRFLEQQ 187

Query: 752  NKVLDTKWTLLQEQGTKTVRQNLEPLFEQYINNLRRQLDSILGERGRLDSELRNMQDLVE 931
            NKVLDTKWTLLQEQGT+TVRQNLEPLFEQYINNLRRQLDSILGERGRLDSELR MQD VE
Sbjct: 188  NKVLDTKWTLLQEQGTRTVRQNLEPLFEQYINNLRRQLDSILGERGRLDSELRGMQDTVE 247

Query: 932  DFKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEAKVDALMDEINFTKMFFEAELS 1111
            DFKNKYEDEINKRT AENEFV LKKDVD AYMNKVEL+AKVDAL DEINF + F++AEL+
Sbjct: 248  DFKNKYEDEINKRTAAENEFVKLKKDVDIAYMNKVELQAKVDALTDEINFLRTFYDAELA 307

Query: 1112 QMQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIANRSRTEAESWYQTKYEELQQTA 1291
            QMQTH+SDTSVVLSMDNNRNLDLDSIIAEVKAQYE+IA RSR EAESWYQ+KYEEL+ TA
Sbjct: 308  QMQTHISDTSVVLSMDNNRNLDLDSIIAEVKAQYEEIAQRSRAEAESWYQSKYEELRVTA 367

Query: 1292 GRHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQNAIADAEQRGELALKDARNKL 1471
            GRHGDDLRNTK EISE+NR+IQRLR+EID+VKKQCA+LQ+AIADAEQRGELALKDARNKL
Sbjct: 368  GRHGDDLRNTKQEISEINRVIQRLRSEIDHVKKQCASLQSAIADAEQRGELALKDARNKL 427

Query: 1472 AELEDALQKAKQDMARLLREYQELMNTKLALDVEIATYRKLLEGEECKLSGEGVGPVNIS 1651
            A LEDALQKAKQDMARLL+EYQELMN KLALDVEIATYRKLLEGEEC+LSGEGVG VNIS
Sbjct: 428  AGLEDALQKAKQDMARLLKEYQELMNVKLALDVEIATYRKLLEGEECRLSGEGVGQVNIS 487

Query: 1652 VVTNT 1666
            VV +T
Sbjct: 488  VVQST 492


>ref|XP_872255.1| PREDICTED: keratin 6C isoform 2 [Bos taurus].
          Length = 549

 Score =  650 bits (1676), Expect = 0.0
 Identities = 330/365 (90%), Positives = 349/365 (95%)
 Frame = +2

Query: 572  PVCPPGGIQEVTVNQSLLTPLNLQIDPTIQRVRTEEREQIKTLNNKFASFIDKVRFLEQQ 751
            PVCPPGGIQEVTVNQSLLTPLNLQIDPTIQRVRTEEREQIKTLNNKFASFIDKVRFLEQQ
Sbjct: 106  PVCPPGGIQEVTVNQSLLTPLNLQIDPTIQRVRTEEREQIKTLNNKFASFIDKVRFLEQQ 165

Query: 752  NKVLDTKWTLLQEQGTKTVRQNLEPLFEQYINNLRRQLDSILGERGRLDSELRNMQDLVE 931
            NKVLDTKWTLLQEQGT+TVRQNLEPLFEQYINNLRRQLDSILGERGRLDSELR MQD VE
Sbjct: 166  NKVLDTKWTLLQEQGTRTVRQNLEPLFEQYINNLRRQLDSILGERGRLDSELRGMQDTVE 225

Query: 932  DFKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEAKVDALMDEINFTKMFFEAELS 1111
            DFKNKYEDEINKRT AENEFV LKKDVD AYMNKVEL+AKVDAL DEINF + F++AEL+
Sbjct: 226  DFKNKYEDEINKRTAAENEFVKLKKDVDIAYMNKVELQAKVDALTDEINFLRTFYDAELA 285

Query: 1112 QMQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIANRSRTEAESWYQTKYEELQQTA 1291
            QMQTH+SDTSVVLSMDNNRNLDLDSIIAEVKAQYE+IA RSR EAESWYQ+KYEEL+ TA
Sbjct: 286  QMQTHISDTSVVLSMDNNRNLDLDSIIAEVKAQYEEIAQRSRAEAESWYQSKYEELRVTA 345

Query: 1292 GRHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQNAIADAEQRGELALKDARNKL 1471
            GRHGDDLRNTK EISE+NR+IQRLR+EID+VKKQCA+LQ+AIADAEQRGELALKDARNKL
Sbjct: 346  GRHGDDLRNTKQEISEINRVIQRLRSEIDHVKKQCASLQSAIADAEQRGELALKDARNKL 405

Query: 1472 AELEDALQKAKQDMARLLREYQELMNTKLALDVEIATYRKLLEGEECKLSGEGVGPVNIS 1651
            A LEDALQKAKQDMARLL+EYQELMN KLALDVEIATYRKLLEGEEC+LSGEGVG VNIS
Sbjct: 406  AGLEDALQKAKQDMARLLKEYQELMNVKLALDVEIATYRKLLEGEECRLSGEGVGQVNIS 465

Query: 1652 VVTNT 1666
            VV +T
Sbjct: 466  VVQST 470


>ref|XP_884760.1| PREDICTED: keratin 6C isoform 3 [Bos taurus].
          Length = 571

 Score =  650 bits (1676), Expect = 0.0
 Identities = 330/365 (90%), Positives = 349/365 (95%)
 Frame = +2

Query: 572  PVCPPGGIQEVTVNQSLLTPLNLQIDPTIQRVRTEEREQIKTLNNKFASFIDKVRFLEQQ 751
            PVCPPGGIQEVTVNQSLLTPLNLQIDPTIQRVRTEEREQIKTLNNKFASFIDKVRFLEQQ
Sbjct: 128  PVCPPGGIQEVTVNQSLLTPLNLQIDPTIQRVRTEEREQIKTLNNKFASFIDKVRFLEQQ 187

Query: 752  NKVLDTKWTLLQEQGTKTVRQNLEPLFEQYINNLRRQLDSILGERGRLDSELRNMQDLVE 931
            NKVLDTKWTLLQEQGT+TVRQNLEPLFEQYINNLRRQLDSILGERGRLDSELR MQD VE
Sbjct: 188  NKVLDTKWTLLQEQGTRTVRQNLEPLFEQYINNLRRQLDSILGERGRLDSELRGMQDTVE 247

Query: 932  DFKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEAKVDALMDEINFTKMFFEAELS 1111
            DFKNKYEDEINKRT AENEFV LKKDVD AYMNKVEL+AKVDAL DEINF + F++AEL+
Sbjct: 248  DFKNKYEDEINKRTAAENEFVKLKKDVDIAYMNKVELQAKVDALTDEINFLRTFYDAELA 307

Query: 1112 QMQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIANRSRTEAESWYQTKYEELQQTA 1291
            QMQTH+SDTSVVLSMDNNRNLDLDSIIAEVKAQYE+IA RSR EAESWYQ+KYEEL+ TA
Sbjct: 308  QMQTHISDTSVVLSMDNNRNLDLDSIIAEVKAQYEEIAQRSRAEAESWYQSKYEELRVTA 367

Query: 1292 GRHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQNAIADAEQRGELALKDARNKL 1471
            GRHGDDLRNTK EISE+NR+IQRLR+EID+VKKQCA+LQ+AIADAEQRGELALKDARNKL
Sbjct: 368  GRHGDDLRNTKQEISEINRVIQRLRSEIDHVKKQCASLQSAIADAEQRGELALKDARNKL 427

Query: 1472 AELEDALQKAKQDMARLLREYQELMNTKLALDVEIATYRKLLEGEECKLSGEGVGPVNIS 1651
            A LEDALQKAKQDMARLL+EYQELMN KLALDVEIATYRKLLEGEEC+LSGEGVG VNIS
Sbjct: 428  AGLEDALQKAKQDMARLLKEYQELMNVKLALDVEIATYRKLLEGEECRLSGEGVGQVNIS 487

Query: 1652 VVTNT 1666
            VV +T
Sbjct: 488  VVQST 492


>ref|XP_002687295.1| PREDICTED: cytokeratin type II, component IV isoform 2 [Bos taurus].
          Length = 549

 Score =  649 bits (1675), Expect = 0.0
 Identities = 329/365 (90%), Positives = 350/365 (95%)
 Frame = +2

Query: 572  PVCPPGGIQEVTVNQSLLTPLNLQIDPTIQRVRTEEREQIKTLNNKFASFIDKVRFLEQQ 751
            PVCPPGGIQEVTVNQSLLTPLNLQIDPTIQRVRTEEREQIKTLNNKFASFIDKVRFLEQQ
Sbjct: 106  PVCPPGGIQEVTVNQSLLTPLNLQIDPTIQRVRTEEREQIKTLNNKFASFIDKVRFLEQQ 165

Query: 752  NKVLDTKWTLLQEQGTKTVRQNLEPLFEQYINNLRRQLDSILGERGRLDSELRNMQDLVE 931
            NKVLDTKWTLLQEQGT+TVRQNLEPLFEQYINNLRRQLDSILGERGRLDSELR MQD VE
Sbjct: 166  NKVLDTKWTLLQEQGTRTVRQNLEPLFEQYINNLRRQLDSILGERGRLDSELRGMQDTVE 225

Query: 932  DFKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEAKVDALMDEINFTKMFFEAELS 1111
            DFKNKYEDEINKRT AENEFV LKKDVD AYMNKVEL+AKVDAL DEINF + F++AEL+
Sbjct: 226  DFKNKYEDEINKRTAAENEFVKLKKDVDIAYMNKVELQAKVDALTDEINFLRTFYDAELA 285

Query: 1112 QMQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIANRSRTEAESWYQTKYEELQQTA 1291
            QMQTH+SDTSVVLSMDNNRNLDLDSIIAEVKAQYE+IA RSR EAESWYQ+KYEEL+ TA
Sbjct: 286  QMQTHISDTSVVLSMDNNRNLDLDSIIAEVKAQYEEIAQRSRAEAESWYQSKYEELRVTA 345

Query: 1292 GRHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQNAIADAEQRGELALKDARNKL 1471
            GRHGDDLRNTK EISE+NR+IQRLR+EID+VKKQCA+LQ+AIADAEQRGELALKDAR+KL
Sbjct: 346  GRHGDDLRNTKQEISEINRVIQRLRSEIDHVKKQCASLQSAIADAEQRGELALKDARSKL 405

Query: 1472 AELEDALQKAKQDMARLLREYQELMNTKLALDVEIATYRKLLEGEECKLSGEGVGPVNIS 1651
            A+LEDALQKAKQDMARLL+EYQELMN KLALDVEIATYRKLLEGEEC+LSGEGVG VNIS
Sbjct: 406  ADLEDALQKAKQDMARLLKEYQELMNVKLALDVEIATYRKLLEGEECRLSGEGVGQVNIS 465

Query: 1652 VVTNT 1666
            VV +T
Sbjct: 466  VVQST 470


>ref|XP_002687294.1| PREDICTED: cytokeratin type II, component IV isoform 1 [Bos taurus].
          Length = 571

 Score =  649 bits (1675), Expect = 0.0
 Identities = 329/365 (90%), Positives = 350/365 (95%)
 Frame = +2

Query: 572  PVCPPGGIQEVTVNQSLLTPLNLQIDPTIQRVRTEEREQIKTLNNKFASFIDKVRFLEQQ 751
            PVCPPGGIQEVTVNQSLLTPLNLQIDPTIQRVRTEEREQIKTLNNKFASFIDKVRFLEQQ
Sbjct: 128  PVCPPGGIQEVTVNQSLLTPLNLQIDPTIQRVRTEEREQIKTLNNKFASFIDKVRFLEQQ 187

Query: 752  NKVLDTKWTLLQEQGTKTVRQNLEPLFEQYINNLRRQLDSILGERGRLDSELRNMQDLVE 931
            NKVLDTKWTLLQEQGT+TVRQNLEPLFEQYINNLRRQLDSILGERGRLDSELR MQD VE
Sbjct: 188  NKVLDTKWTLLQEQGTRTVRQNLEPLFEQYINNLRRQLDSILGERGRLDSELRGMQDTVE 247

Query: 932  DFKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEAKVDALMDEINFTKMFFEAELS 1111
            DFKNKYEDEINKRT AENEFV LKKDVD AYMNKVEL+AKVDAL DEINF + F++AEL+
Sbjct: 248  DFKNKYEDEINKRTAAENEFVKLKKDVDIAYMNKVELQAKVDALTDEINFLRTFYDAELA 307

Query: 1112 QMQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIANRSRTEAESWYQTKYEELQQTA 1291
            QMQTH+SDTSVVLSMDNNRNLDLDSIIAEVKAQYE+IA RSR EAESWYQ+KYEEL+ TA
Sbjct: 308  QMQTHISDTSVVLSMDNNRNLDLDSIIAEVKAQYEEIAQRSRAEAESWYQSKYEELRVTA 367

Query: 1292 GRHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQNAIADAEQRGELALKDARNKL 1471
            GRHGDDLRNTK EISE+NR+IQRLR+EID+VKKQCA+LQ+AIADAEQRGELALKDAR+KL
Sbjct: 368  GRHGDDLRNTKQEISEINRVIQRLRSEIDHVKKQCASLQSAIADAEQRGELALKDARSKL 427

Query: 1472 AELEDALQKAKQDMARLLREYQELMNTKLALDVEIATYRKLLEGEECKLSGEGVGPVNIS 1651
            A+LEDALQKAKQDMARLL+EYQELMN KLALDVEIATYRKLLEGEEC+LSGEGVG VNIS
Sbjct: 428  ADLEDALQKAKQDMARLLKEYQELMNVKLALDVEIATYRKLLEGEECRLSGEGVGQVNIS 487

Query: 1652 VVTNT 1666
            VV +T
Sbjct: 488  VVQST 492


>ref|XP_001789677.1| PREDICTED: keratin 6A-like [Bos taurus].
          Length = 480

 Score =  649 bits (1675), Expect = 0.0
 Identities = 329/365 (90%), Positives = 350/365 (95%)
 Frame = +2

Query: 572  PVCPPGGIQEVTVNQSLLTPLNLQIDPTIQRVRTEEREQIKTLNNKFASFIDKVRFLEQQ 751
            PVCPPGGIQEVTVNQSLLTPLNLQIDPTIQRVRTEEREQIKTLNNKFASFIDKVRFLEQQ
Sbjct: 37   PVCPPGGIQEVTVNQSLLTPLNLQIDPTIQRVRTEEREQIKTLNNKFASFIDKVRFLEQQ 96

Query: 752  NKVLDTKWTLLQEQGTKTVRQNLEPLFEQYINNLRRQLDSILGERGRLDSELRNMQDLVE 931
            NKVLDTKWTLLQEQGT+TVRQNLEPLFEQYINNLRRQLDSILGERGRLDSELR MQD VE
Sbjct: 97   NKVLDTKWTLLQEQGTRTVRQNLEPLFEQYINNLRRQLDSILGERGRLDSELRGMQDTVE 156

Query: 932  DFKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEAKVDALMDEINFTKMFFEAELS 1111
            DFKNKYEDEINKRT AENEFV LKKDVD AYMNKVEL+AKVDAL DEINF + F++AEL+
Sbjct: 157  DFKNKYEDEINKRTAAENEFVKLKKDVDIAYMNKVELQAKVDALTDEINFLRTFYDAELA 216

Query: 1112 QMQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIANRSRTEAESWYQTKYEELQQTA 1291
            QMQTH+SDTSVVLSMDNNRNLDLDSIIAEVKAQYE+IA RSR EAESWYQ+KYEEL+ TA
Sbjct: 217  QMQTHISDTSVVLSMDNNRNLDLDSIIAEVKAQYEEIAQRSRAEAESWYQSKYEELRVTA 276

Query: 1292 GRHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQNAIADAEQRGELALKDARNKL 1471
            GRHGDDLRNTK EISE+NR+IQRLR+EID+VKKQCA+LQ+AIADAEQRGELALKDAR+KL
Sbjct: 277  GRHGDDLRNTKQEISEINRVIQRLRSEIDHVKKQCASLQSAIADAEQRGELALKDARSKL 336

Query: 1472 AELEDALQKAKQDMARLLREYQELMNTKLALDVEIATYRKLLEGEECKLSGEGVGPVNIS 1651
            A+LEDALQKAKQDMARLL+EYQELMN KLALDVEIATYRKLLEGEEC+LSGEGVG VNIS
Sbjct: 337  ADLEDALQKAKQDMARLLKEYQELMNVKLALDVEIATYRKLLEGEECRLSGEGVGQVNIS 396

Query: 1652 VVTNT 1666
            VV +T
Sbjct: 397  VVQST 401


>ref|XP_869322.1| PREDICTED: cytokeratin type II, component IV isoform 3 [Bos taurus].
          Length = 549

 Score =  649 bits (1675), Expect = 0.0
 Identities = 329/365 (90%), Positives = 350/365 (95%)
 Frame = +2

Query: 572  PVCPPGGIQEVTVNQSLLTPLNLQIDPTIQRVRTEEREQIKTLNNKFASFIDKVRFLEQQ 751
            PVCPPGGIQEVTVNQSLLTPLNLQIDPTIQRVRTEEREQIKTLNNKFASFIDKVRFLEQQ
Sbjct: 106  PVCPPGGIQEVTVNQSLLTPLNLQIDPTIQRVRTEEREQIKTLNNKFASFIDKVRFLEQQ 165

Query: 752  NKVLDTKWTLLQEQGTKTVRQNLEPLFEQYINNLRRQLDSILGERGRLDSELRNMQDLVE 931
            NKVLDTKWTLLQEQGT+TVRQNLEPLFEQYINNLRRQLDSILGERGRLDSELR MQD VE
Sbjct: 166  NKVLDTKWTLLQEQGTRTVRQNLEPLFEQYINNLRRQLDSILGERGRLDSELRGMQDTVE 225

Query: 932  DFKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEAKVDALMDEINFTKMFFEAELS 1111
            DFKNKYEDEINKRT AENEFV LKKDVD AYMNKVEL+AKVDAL DEINF + F++AEL+
Sbjct: 226  DFKNKYEDEINKRTAAENEFVKLKKDVDIAYMNKVELQAKVDALTDEINFLRTFYDAELA 285

Query: 1112 QMQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIANRSRTEAESWYQTKYEELQQTA 1291
            QMQTH+SDTSVVLSMDNNRNLDLDSIIAEVKAQYE+IA RSR EAESWYQ+KYEEL+ TA
Sbjct: 286  QMQTHISDTSVVLSMDNNRNLDLDSIIAEVKAQYEEIAQRSRAEAESWYQSKYEELRVTA 345

Query: 1292 GRHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQNAIADAEQRGELALKDARNKL 1471
            GRHGDDLRNTK EISE+NR+IQRLR+EID+VKKQCA+LQ+AIADAEQRGELALKDAR+KL
Sbjct: 346  GRHGDDLRNTKQEISEINRVIQRLRSEIDHVKKQCASLQSAIADAEQRGELALKDARSKL 405

Query: 1472 AELEDALQKAKQDMARLLREYQELMNTKLALDVEIATYRKLLEGEECKLSGEGVGPVNIS 1651
            A+LEDALQKAKQDMARLL+EYQELMN KLALDVEIATYRKLLEGEEC+LSGEGVG VNIS
Sbjct: 406  ADLEDALQKAKQDMARLLKEYQELMNVKLALDVEIATYRKLLEGEECRLSGEGVGQVNIS 465

Query: 1652 VVTNT 1666
            VV +T
Sbjct: 466  VVQST 470


  Database: RefSeq49_BP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 17,681,374
  Number of sequences in database:  33,088
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 51,462,915
Number of extensions: 1346809
Number of successful extensions: 9475
Number of sequences better than 1.0e-05: 151
Number of HSP's gapped: 9063
Number of HSP's successfully gapped: 164
Length of query: 610
Length of database: 17,681,374
Length adjustment: 108
Effective length of query: 502
Effective length of database: 14,107,870
Effective search space: 7082150740
Effective search space used: 7082150740
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-007305
         (1830 letters)

Database: RefSeq49_CP.fasta 
           33,336 sequences; 18,874,504 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_860457.1| PREDICTED: similar to Keratin, type II cytoskel...   652   0.0  
Alignment   gi|XP_850008.1| PREDICTED: similar to Keratin, type II cytoskel...   652   0.0  
Alignment   gi|XP_543650.2| PREDICTED: similar to cytokeratin type II [Cani...   625   e-179
Alignment   gi|XP_543641.2| PREDICTED: similar to keratin 6L [Canis familia...   537   e-152
Alignment   gi|NP_001003392.1| keratin, type II cytoskeletal 1 [Canis lupus...   526   e-149
Alignment   gi|XP_543646.2| PREDICTED: similar to keratin protein K6irs [Ca...   524   e-148
Alignment   gi|XP_850012.1| PREDICTED: similar to keratin 6 irs3 [Canis fam...   523   e-148
Alignment   gi|NP_001014299.1| keratin, type II cytoskeletal 2 oral [Canis ...   508   e-143
Alignment   gi|NP_001183958.1| keratin 71 [Canis lupus familiaris].              506   e-143
Alignment   gi|XP_543647.2| PREDICTED: similar to keratin 6 irs4 [Canis fam...   502   e-142

>ref|XP_860457.1| PREDICTED: similar to Keratin, type II cytoskeletal 6A (Cytokeratin
            6A) (CK 6A) (K6a keratin) isoform 3 [Canis familiaris].
          Length = 559

 Score =  652 bits (1683), Expect = 0.0
 Identities = 330/365 (90%), Positives = 351/365 (96%)
 Frame = +2

Query: 572  PVCPPGGIQEVTVNQSLLTPLNLQIDPTIQRVRTEEREQIKTLNNKFASFIDKVRFLEQQ 751
            PVCPPGGIQEVTVNQ+LLTPLNLQIDPTIQRVRTEEREQIKTLNNKFASFIDKVRFLEQQ
Sbjct: 117  PVCPPGGIQEVTVNQNLLTPLNLQIDPTIQRVRTEEREQIKTLNNKFASFIDKVRFLEQQ 176

Query: 752  NKVLDTKWTLLQEQGTKTVRQNLEPLFEQYINNLRRQLDSILGERGRLDSELRNMQDLVE 931
            NKVLDTKWTLLQEQGTKTVRQNLEPLFEQYINNLRRQLDSILGERGRLDSELR+MQD VE
Sbjct: 177  NKVLDTKWTLLQEQGTKTVRQNLEPLFEQYINNLRRQLDSILGERGRLDSELRSMQDTVE 236

Query: 932  DFKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEAKVDALMDEINFTKMFFEAELS 1111
            DFKNKYE+EINKRT AENEFV LKKDVDAAYMNKVEL+AKVDAL DEINFT+  ++AELS
Sbjct: 237  DFKNKYEEEINKRTAAENEFVTLKKDVDAAYMNKVELQAKVDALTDEINFTRALYDAELS 296

Query: 1112 QMQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIANRSRTEAESWYQTKYEELQQTA 1291
            QMQTH+SDTSVVLSMDNNRNLDLDSIIAEVKAQYE+IA RSR EAESWYQ+KYEELQ +A
Sbjct: 297  QMQTHISDTSVVLSMDNNRNLDLDSIIAEVKAQYEEIAQRSRAEAESWYQSKYEELQVSA 356

Query: 1292 GRHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQNAIADAEQRGELALKDARNKL 1471
            GRHGDDLRNTK EI+E+NRMIQRLR+EID+VKKQC NLQ+AIADAEQRGE+ALKDA+NKL
Sbjct: 357  GRHGDDLRNTKQEIAEINRMIQRLRSEIDHVKKQCTNLQSAIADAEQRGEMALKDAKNKL 416

Query: 1472 AELEDALQKAKQDMARLLREYQELMNTKLALDVEIATYRKLLEGEECKLSGEGVGPVNIS 1651
            A LEDALQKAKQDMARLL+EYQELMNTKLALDVEIATYRKLLEGEEC+LSGEGVG VNIS
Sbjct: 417  AGLEDALQKAKQDMARLLKEYQELMNTKLALDVEIATYRKLLEGEECRLSGEGVGQVNIS 476

Query: 1652 VVTNT 1666
            VV +T
Sbjct: 477  VVQST 481


>ref|XP_850008.1| PREDICTED: similar to Keratin, type II cytoskeletal 6A (Cytokeratin
            6A) (CK 6A) (K6a keratin) isoform 2 [Canis familiaris].
          Length = 570

 Score =  652 bits (1683), Expect = 0.0
 Identities = 330/365 (90%), Positives = 351/365 (96%)
 Frame = +2

Query: 572  PVCPPGGIQEVTVNQSLLTPLNLQIDPTIQRVRTEEREQIKTLNNKFASFIDKVRFLEQQ 751
            PVCPPGGIQEVTVNQ+LLTPLNLQIDPTIQRVRTEEREQIKTLNNKFASFIDKVRFLEQQ
Sbjct: 128  PVCPPGGIQEVTVNQNLLTPLNLQIDPTIQRVRTEEREQIKTLNNKFASFIDKVRFLEQQ 187

Query: 752  NKVLDTKWTLLQEQGTKTVRQNLEPLFEQYINNLRRQLDSILGERGRLDSELRNMQDLVE 931
            NKVLDTKWTLLQEQGTKTVRQNLEPLFEQYINNLRRQLDSILGERGRLDSELR+MQD VE
Sbjct: 188  NKVLDTKWTLLQEQGTKTVRQNLEPLFEQYINNLRRQLDSILGERGRLDSELRSMQDTVE 247

Query: 932  DFKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEAKVDALMDEINFTKMFFEAELS 1111
            DFKNKYE+EINKRT AENEFV LKKDVDAAYMNKVEL+AKVDAL DEINFT+  ++AELS
Sbjct: 248  DFKNKYEEEINKRTAAENEFVTLKKDVDAAYMNKVELQAKVDALTDEINFTRALYDAELS 307

Query: 1112 QMQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIANRSRTEAESWYQTKYEELQQTA 1291
            QMQTH+SDTSVVLSMDNNRNLDLDSIIAEVKAQYE+IA RSR EAESWYQ+KYEELQ +A
Sbjct: 308  QMQTHISDTSVVLSMDNNRNLDLDSIIAEVKAQYEEIAQRSRAEAESWYQSKYEELQVSA 367

Query: 1292 GRHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQNAIADAEQRGELALKDARNKL 1471
            GRHGDDLRNTK EI+E+NRMIQRLR+EID+VKKQC NLQ+AIADAEQRGE+ALKDA+NKL
Sbjct: 368  GRHGDDLRNTKQEIAEINRMIQRLRSEIDHVKKQCTNLQSAIADAEQRGEMALKDAKNKL 427

Query: 1472 AELEDALQKAKQDMARLLREYQELMNTKLALDVEIATYRKLLEGEECKLSGEGVGPVNIS 1651
            A LEDALQKAKQDMARLL+EYQELMNTKLALDVEIATYRKLLEGEEC+LSGEGVG VNIS
Sbjct: 428  AGLEDALQKAKQDMARLLKEYQELMNTKLALDVEIATYRKLLEGEECRLSGEGVGQVNIS 487

Query: 1652 VVTNT 1666
            VV +T
Sbjct: 488  VVQST 492


>ref|XP_543650.2| PREDICTED: similar to cytokeratin type II [Canis familiaris].
          Length = 975

 Score =  625 bits (1612), Expect = e-179
 Identities = 317/361 (87%), Positives = 339/361 (93%)
 Frame = +2

Query: 572  PVCPPGGIQEVTVNQSLLTPLNLQIDPTIQRVRTEEREQIKTLNNKFASFIDKVRFLEQQ 751
            PVCPPGGIQEVTVNQSLLTPLNLQIDP IQRVR EEREQIKTLNNKFASFIDKVRFLEQQ
Sbjct: 114  PVCPPGGIQEVTVNQSLLTPLNLQIDPAIQRVRKEEREQIKTLNNKFASFIDKVRFLEQQ 173

Query: 752  NKVLDTKWTLLQEQGTKTVRQNLEPLFEQYINNLRRQLDSILGERGRLDSELRNMQDLVE 931
            NKVL+TKW LLQEQG+KTVRQNLEP F+ YIN+LRRQLDS+  ERGRLD+ELRNMQD+VE
Sbjct: 174  NKVLETKWELLQEQGSKTVRQNLEPFFDTYINDLRRQLDSVTTERGRLDAELRNMQDVVE 233

Query: 932  DFKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEAKVDALMDEINFTKMFFEAELS 1111
            DFK +YEDEINKRT AENEFV LKKDVD+AYMNKVELEAKV++L DEINF +M FEAELS
Sbjct: 234  DFKVRYEDEINKRTAAENEFVALKKDVDSAYMNKVELEAKVNSLTDEINFLRMLFEAELS 293

Query: 1112 QMQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIANRSRTEAESWYQTKYEELQQTA 1291
            QMQT VSDTSVVLSMDNNR+LDLDSIIAEVKAQYEDIANRSR EAESWYQTKYEELQ TA
Sbjct: 294  QMQTQVSDTSVVLSMDNNRSLDLDSIIAEVKAQYEDIANRSRAEAESWYQTKYEELQVTA 353

Query: 1292 GRHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQNAIADAEQRGELALKDARNKL 1471
            GRHGDDLRNTK EISEMNR+IQRLRAEID++KKQC++LQ AIADAEQRGELALKDAR KL
Sbjct: 354  GRHGDDLRNTKQEISEMNRVIQRLRAEIDSIKKQCSSLQTAIADAEQRGELALKDARAKL 413

Query: 1472 AELEDALQKAKQDMARLLREYQELMNTKLALDVEIATYRKLLEGEECKLSGEGVGPVNIS 1651
             +LE+ALQKAKQDMARLLREYQELMN KLALDVEIATYRKLLEGEEC+LSGEGV PVNIS
Sbjct: 414  VDLEEALQKAKQDMARLLREYQELMNVKLALDVEIATYRKLLEGEECRLSGEGVSPVNIS 473

Query: 1652 V 1654
            +
Sbjct: 474  I 474



 Score =  587 bits (1512), Expect = e-167
 Identities = 294/359 (81%), Positives = 337/359 (93%)
 Frame = +2

Query: 590  GIQEVTVNQSLLTPLNLQIDPTIQRVRTEEREQIKTLNNKFASFIDKVRFLEQQNKVLDT 769
            GIQEVTVNQSLLTPL+L+IDP++QRVR EE+EQIKTLNNKFASFIDKVRFLEQQNKVL+T
Sbjct: 558  GIQEVTVNQSLLTPLHLEIDPSLQRVRKEEKEQIKTLNNKFASFIDKVRFLEQQNKVLET 617

Query: 770  KWTLLQEQGTKTVRQNLEPLFEQYINNLRRQLDSILGERGRLDSELRNMQDLVEDFKNKY 949
            KW+LLQE   KT R N+EP+FE YI+NLRRQL+ + GER RL+SEL+NMQD+VEDFKNKY
Sbjct: 618  KWSLLQEH--KTTRANIEPMFEAYISNLRRQLECLGGERTRLESELKNMQDVVEDFKNKY 675

Query: 950  EDEINKRTTAENEFVMLKKDVDAAYMNKVELEAKVDALMDEINFTKMFFEAELSQMQTHV 1129
            E+EIN+RT AENEFV+LKKDVDAAYMNKVELEAKVDALMDEINF + F++AEL+Q+Q  +
Sbjct: 676  EEEINRRTVAENEFVVLKKDVDAAYMNKVELEAKVDALMDEINFLRAFYDAELAQLQAQI 735

Query: 1130 SDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIANRSRTEAESWYQTKYEELQQTAGRHGDD 1309
            S+TSVVLSMDNNR LDLDSII+EVKAQYEDIANRSR EAESWYQTKYEELQ++AGRHGDD
Sbjct: 736  SETSVVLSMDNNRKLDLDSIISEVKAQYEDIANRSRAEAESWYQTKYEELQRSAGRHGDD 795

Query: 1310 LRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQNAIADAEQRGELALKDARNKLAELEDA 1489
            LR TK EISE+NR++QRLR+EIDN+KKQCA +Q+AIADAEQRGELALKDA++KLAELEDA
Sbjct: 796  LRTTKMEISELNRVMQRLRSEIDNLKKQCATMQSAIADAEQRGELALKDAKHKLAELEDA 855

Query: 1490 LQKAKQDMARLLREYQELMNTKLALDVEIATYRKLLEGEECKLSGEGVGPVNISVVTNT 1666
            LQKAKQDMAR LREYQELMN KLALD+EIATYRKLLEGEEC+L+GEGVGPVNISVV+++
Sbjct: 856  LQKAKQDMARQLREYQELMNVKLALDIEIATYRKLLEGEECRLTGEGVGPVNISVVSSS 914


>ref|XP_543641.2| PREDICTED: similar to keratin 6L [Canis familiaris].
          Length = 535

 Score =  537 bits (1383), Expect = e-152
 Identities = 268/367 (73%), Positives = 318/367 (86%), Gaps = 2/367 (0%)
 Frame = +2

Query: 572  PVCPPGGIQEVTVNQSLLTPLNLQIDPTIQRVRTEEREQIKTLNNKFASFIDKVRFLEQQ 751
            P CPPGGIQEVTVNQSLLTPLN++IDP IQRVRT+EREQIKTLNNKFASFIDKVRFLEQQ
Sbjct: 107  PACPPGGIQEVTVNQSLLTPLNVEIDPEIQRVRTQEREQIKTLNNKFASFIDKVRFLEQQ 166

Query: 752  NKVLDTKWTLLQEQGTKT--VRQNLEPLFEQYINNLRRQLDSILGERGRLDSELRNMQDL 925
            NKVL+TKW LLQEQG  +   R NLEPLFE Y+ NLRRQLD++  +RGRLDSELRN+QD+
Sbjct: 167  NKVLETKWALLQEQGQNSGVTRNNLEPLFENYLGNLRRQLDNLQSDRGRLDSELRNVQDV 226

Query: 926  VEDFKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEAKVDALMDEINFTKMFFEAE 1105
            +EDFK+KYEDEINKRT AENEFV+LKKDVDAAYM++++L+ K   L +E++F    +E E
Sbjct: 227  LEDFKSKYEDEINKRTAAENEFVLLKKDVDAAYMSRMDLQGKASTLTEELDFLNHLYEME 286

Query: 1106 LSQMQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIANRSRTEAESWYQTKYEELQQ 1285
            LSQ+QTHVSDT+VVLSMDNNR+LDLDSIIAEVKAQYE IA RSR EAE+WYQTKYEELQ 
Sbjct: 287  LSQVQTHVSDTNVVLSMDNNRSLDLDSIIAEVKAQYELIAQRSRAEAEAWYQTKYEELQV 346

Query: 1286 TAGRHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQNAIADAEQRGELALKDARN 1465
            TAG+HGD+LR+TK+EI+E+ R +QRL+ E+D VKKQC  LQ AIA+AEQRG++ALKDA+ 
Sbjct: 347  TAGKHGDNLRDTKNEIAELTRTVQRLQGEVDAVKKQCQQLQTAIAEAEQRGDMALKDAQK 406

Query: 1466 KLAELEDALQKAKQDMARLLREYQELMNTKLALDVEIATYRKLLEGEECKLSGEGVGPVN 1645
            KL +L+ AL +AK+D+ARLLR+YQ LMN KLALDVEIATYRKLLE EE ++SGE    V+
Sbjct: 407  KLGDLDMALHQAKEDLARLLRDYQALMNVKLALDVEIATYRKLLESEESRMSGECPSAVS 466

Query: 1646 ISVVTNT 1666
            ISV  N+
Sbjct: 467  ISVTGNS 473


>ref|NP_001003392.1| keratin, type II cytoskeletal 1 [Canis lupus familiaris].
          Length = 619

 Score =  526 bits (1355), Expect = e-149
 Identities = 262/364 (71%), Positives = 320/364 (87%)
 Frame = +2

Query: 572  PVCPPGGIQEVTVNQSLLTPLNLQIDPTIQRVRTEEREQIKTLNNKFASFIDKVRFLEQQ 751
            PVCPPGGIQEVT+NQSLL PLN++IDP IQ+V+T EREQIK+LNN+FASFIDKVRFLEQQ
Sbjct: 146  PVCPPGGIQEVTINQSLLQPLNVEIDPEIQKVKTREREQIKSLNNQFASFIDKVRFLEQQ 205

Query: 752  NKVLDTKWTLLQEQGTKTVRQNLEPLFEQYINNLRRQLDSILGERGRLDSELRNMQDLVE 931
            N+VL TKW LLQ+  T T   +LEP FE YI+NLRR++D +  ++ R+DSEL+NMQDLVE
Sbjct: 206  NQVLQTKWELLQQVDTSTRTHSLEPYFENYISNLRRRVDQLKSDQSRMDSELKNMQDLVE 265

Query: 932  DFKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEAKVDALMDEINFTKMFFEAELS 1111
            D++NKYEDEINKRT AENEFV +KKDVDAA+MNKV+L+AKVD L  EI+F    ++AELS
Sbjct: 266  DYRNKYEDEINKRTNAENEFVTIKKDVDAAFMNKVDLQAKVDNLQQEIDFLTTLYQAELS 325

Query: 1112 QMQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIANRSRTEAESWYQTKYEELQQTA 1291
            QMQT +S+T+V+LSMDNNR+LDLDSII+EVKAQYE+IA +S+ EAE+ YQTKYEELQ TA
Sbjct: 326  QMQTQISETNVILSMDNNRSLDLDSIISEVKAQYEEIAQKSKAEAEALYQTKYEELQITA 385

Query: 1292 GRHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQNAIADAEQRGELALKDARNKL 1471
            G+HGD+L++TK EISE+NR+ QRLR+EID+VKKQ + LQ +I+DAEQRGE ALKDA++KL
Sbjct: 386  GKHGDNLKSTKMEISELNRVAQRLRSEIDSVKKQISALQQSISDAEQRGENALKDAQSKL 445

Query: 1472 AELEDALQKAKQDMARLLREYQELMNTKLALDVEIATYRKLLEGEECKLSGEGVGPVNIS 1651
            AELEDALQKAK+DMARLLR+YQELMNTKLALD+EIATYR LLEGEE ++SGE    V++S
Sbjct: 446  AELEDALQKAKEDMARLLRDYQELMNTKLALDMEIATYRTLLEGEESRMSGECAPNVSVS 505

Query: 1652 VVTN 1663
            V T+
Sbjct: 506  VNTS 509


>ref|XP_543646.2| PREDICTED: similar to keratin protein K6irs [Canis familiaris].
          Length = 523

 Score =  524 bits (1349), Expect = e-148
 Identities = 261/364 (71%), Positives = 318/364 (87%)
 Frame = +2

Query: 575  VCPPGGIQEVTVNQSLLTPLNLQIDPTIQRVRTEEREQIKTLNNKFASFIDKVRFLEQQN 754
            VCPPGGI +VTVN+SLL PLN+++DP IQ+VR +EREQIK LNNKFASFIDKVRFLEQQN
Sbjct: 103  VCPPGGIPQVTVNRSLLAPLNVELDPEIQKVRAQEREQIKALNNKFASFIDKVRFLEQQN 162

Query: 755  KVLDTKWTLLQEQGTKTVRQNLEPLFEQYINNLRRQLDSILGERGRLDSELRNMQDLVED 934
            +VL+TKW LLQ+      R+NLEP++E YI+NLR+QL++  G+R RLDSELR+MQDLVED
Sbjct: 163  QVLETKWNLLQQLDLNNCRKNLEPIYEGYISNLRKQLETQTGDRVRLDSELRSMQDLVED 222

Query: 935  FKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEAKVDALMDEINFTKMFFEAELSQ 1114
            +K +YE EIN+RT AENEFV+LKKDVDAAYMNKVEL+AKVD+L DEI F K  +E E++Q
Sbjct: 223  YKKRYEVEINRRTAAENEFVVLKKDVDAAYMNKVELQAKVDSLTDEIKFFKCLYEGEIAQ 282

Query: 1115 MQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIANRSRTEAESWYQTKYEELQQTAG 1294
            MQ+H+SD SV+LSMDN R+LDLDSII EV+AQYE+IA +S+ EAE+ YQTK +ELQ TAG
Sbjct: 283  MQSHISDMSVILSMDNYRDLDLDSIIDEVRAQYEEIALKSKAEAEALYQTKIQELQVTAG 342

Query: 1295 RHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQNAIADAEQRGELALKDARNKLA 1474
            RHGDDL+ TK EISE+NR+IQR+R+EI NVKKQCANL+ AIADAEQRG+ ALKDAR KL 
Sbjct: 343  RHGDDLKLTKAEISELNRLIQRIRSEIGNVKKQCANLETAIADAEQRGDCALKDARAKLD 402

Query: 1475 ELEDALQKAKQDMARLLREYQELMNTKLALDVEIATYRKLLEGEECKLSGEGVGPVNISV 1654
            ELE AL +AK+++ARLLREYQEL++TKLALD+EIATYRKLLEGEEC++SGE    V+ISV
Sbjct: 403  ELEAALHQAKEELARLLREYQELLSTKLALDMEIATYRKLLEGEECRMSGEHPSSVSISV 462

Query: 1655 VTNT 1666
            ++NT
Sbjct: 463  ISNT 466


>ref|XP_850012.1| PREDICTED: similar to keratin 6 irs3 [Canis familiaris].
          Length = 599

 Score =  523 bits (1348), Expect = e-148
 Identities = 255/364 (70%), Positives = 324/364 (89%)
 Frame = +2

Query: 575  VCPPGGIQEVTVNQSLLTPLNLQIDPTIQRVRTEEREQIKTLNNKFASFIDKVRFLEQQN 754
            VCPPGGI +VTVN++LL PLN+++DP IQ+VRT+EREQIK LNNKFASFIDKVRFLEQQN
Sbjct: 98   VCPPGGIHQVTVNKNLLAPLNVELDPEIQKVRTQEREQIKALNNKFASFIDKVRFLEQQN 157

Query: 755  KVLDTKWTLLQEQGTKTVRQNLEPLFEQYINNLRRQLDSILGERGRLDSELRNMQDLVED 934
            +VL+TKW LLQ+      + NLEP+ E YI+NLR+QL+++ G+R RLDSELR+M+D+VED
Sbjct: 158  QVLETKWELLQQLDVNNCKNNLEPILEGYISNLRKQLETLSGDRVRLDSELRSMRDVVED 217

Query: 935  FKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEAKVDALMDEINFTKMFFEAELSQ 1114
            +K +YE+EINKRTTAENEFV+LKKDVDAAYM+KVEL+AKVDAL  EI F K  +E E++Q
Sbjct: 218  YKKRYEEEINKRTTAENEFVVLKKDVDAAYMSKVELQAKVDALDGEIKFFKCLYEGEIAQ 277

Query: 1115 MQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIANRSRTEAESWYQTKYEELQQTAG 1294
            +Q+H+SDTSV+LSMDNNR+L+LDSIIAEV+AQYE+IA +S+ EAE+ YQTK++ELQ  AG
Sbjct: 278  IQSHISDTSVILSMDNNRDLNLDSIIAEVRAQYEEIALKSKAEAEALYQTKFQELQLAAG 337

Query: 1295 RHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQNAIADAEQRGELALKDARNKLA 1474
            RHGDDL++TK+EISE+ R+IQRLR+EI++VKKQC+NL+ AIADAEQRG+ ALKDAR KL 
Sbjct: 338  RHGDDLKHTKNEISELTRLIQRLRSEIESVKKQCSNLETAIADAEQRGDCALKDARAKLD 397

Query: 1475 ELEDALQKAKQDMARLLREYQELMNTKLALDVEIATYRKLLEGEECKLSGEGVGPVNISV 1654
            ELE AL +AK+++AR+LREYQELM+TKL+LD+EIATYRKLLEGEEC++SGE    V+ISV
Sbjct: 398  ELEAALHQAKEELARMLREYQELMSTKLSLDIEIATYRKLLEGEECRMSGEYTNAVSISV 457

Query: 1655 VTNT 1666
            +++T
Sbjct: 458  ISST 461


>ref|NP_001014299.1| keratin, type II cytoskeletal 2 oral [Canis lupus familiaris].
          Length = 653

 Score =  508 bits (1307), Expect = e-143
 Identities = 270/363 (74%), Positives = 302/363 (83%), Gaps = 2/363 (0%)
 Frame = +2

Query: 584  PGGIQEVTVNQSLLTPLNLQIDPTIQRVRTEEREQIKTLNNKFASFIDKVRFLEQQNKVL 763
            PGGIQEVTVNQSLL PLN++IDP I +V+T+EREQIKTLNNKFASFIDKVRFLEQQNKVL
Sbjct: 169  PGGIQEVTVNQSLLQPLNVEIDPQIGQVKTQEREQIKTLNNKFASFIDKVRFLEQQNKVL 228

Query: 764  DTKWTLLQEQ--GTKTVRQNLEPLFEQYINNLRRQLDSILGERGRLDSELRNMQDLVEDF 937
            +TKW LLQ+Q  G  +   NLEP FE YI+ LRRQLD  LGERG L+ EL+NMQDLVEDF
Sbjct: 229  ETKWELLQQQTTGAGSGPNNLEPFFESYISFLRRQLDLALGERGNLEGELKNMQDLVEDF 288

Query: 938  KNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEAKVDALMDEINFTKMFFEAELSQM 1117
            K KYEDEINKR  AENEFV LKKDVD AYM K EL+AKVD+L DE+NF +  +E      
Sbjct: 289  KKKYEDEINKRNAAENEFVGLKKDVDVAYMTKTELQAKVDSLTDELNFLRTLYE------ 342

Query: 1118 QTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIANRSRTEAESWYQTKYEELQQTAGR 1297
             +HVSDTSVVLSMDNNR LDLDSIIAEVKAQYE+IA RS+ EAE+ YQTK  ELQ TAGR
Sbjct: 343  MSHVSDTSVVLSMDNNRCLDLDSIIAEVKAQYEEIAQRSKAEAEALYQTKLGELQTTAGR 402

Query: 1298 HGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQNAIADAEQRGELALKDARNKLAE 1477
            HGDDL+NTK EI E+NRMIQRLRAEI+NVKKQ ANLQ AIA+AEQRGE+ALKDA  KL  
Sbjct: 403  HGDDLKNTKSEIMELNRMIQRLRAEIENVKKQNANLQAAIAEAEQRGEMALKDANAKLQG 462

Query: 1478 LEDALQKAKQDMARLLREYQELMNTKLALDVEIATYRKLLEGEECKLSGEGVGPVNISVV 1657
            L+ ALQKAK D+ARLL+EYQELMN KLALDVEIATYRKLLEGEEC++SGE      +S V
Sbjct: 463  LQTALQKAKDDLARLLKEYQELMNVKLALDVEIATYRKLLEGEECRMSGECHECSVVSNV 522

Query: 1658 TNT 1666
            T+T
Sbjct: 523  TST 525


>ref|NP_001183958.1| keratin 71 [Canis lupus familiaris].
          Length = 525

 Score =  506 bits (1302), Expect = e-143
 Identities = 245/364 (67%), Positives = 318/364 (87%)
 Frame = +2

Query: 575  VCPPGGIQEVTVNQSLLTPLNLQIDPTIQRVRTEEREQIKTLNNKFASFIDKVRFLEQQN 754
            VCPPGGI +VTVN++LL PLN+++DP IQ+VR +EREQIK LNNKFASFIDKVRFLEQQN
Sbjct: 98   VCPPGGIHQVTVNKNLLAPLNVELDPEIQKVRAQEREQIKALNNKFASFIDKVRFLEQQN 157

Query: 755  KVLDTKWTLLQEQGTKTVRQNLEPLFEQYINNLRRQLDSILGERGRLDSELRNMQDLVED 934
            +VL+TKW LLQ+      + NLEP+ E YI+NLR+QL+++ G+R RLDSELR+++D+VED
Sbjct: 158  QVLETKWELLQQLDLNNCKNNLEPILEGYISNLRKQLETLSGDRVRLDSELRSVRDVVED 217

Query: 935  FKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEAKVDALMDEINFTKMFFEAELSQ 1114
            +K +YE+EIN+RT AENEFV+LKKDVDAAY NKVEL+AKVD++  EI F K  +EAE++Q
Sbjct: 218  YKKRYEEEINRRTAAENEFVLLKKDVDAAYANKVELQAKVDSMDQEIKFFKCLYEAEIAQ 277

Query: 1115 MQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIANRSRTEAESWYQTKYEELQQTAG 1294
            +Q+H+SD SV+LSMDNNR+L+LDSII EV+AQYE+IA +S+ EAE+ YQTK++ELQ  AG
Sbjct: 278  IQSHISDMSVILSMDNNRDLNLDSIIDEVRAQYEEIALKSKAEAEALYQTKFQELQLAAG 337

Query: 1295 RHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQNAIADAEQRGELALKDARNKLA 1474
            RHGDDL+NTK+EISE+ R+IQR+R+EI+NVKKQ +NL+ AIADAEQRG+ ALKDAR KL 
Sbjct: 338  RHGDDLKNTKNEISELTRLIQRIRSEIENVKKQASNLETAIADAEQRGDNALKDARAKLD 397

Query: 1475 ELEDALQKAKQDMARLLREYQELMNTKLALDVEIATYRKLLEGEECKLSGEGVGPVNISV 1654
            ELE AL +AK+++AR+LREYQEL++ KLALD+EIATYRKLLE EEC++SGE   PV+IS+
Sbjct: 398  ELEAALHQAKEELARMLREYQELLSLKLALDMEIATYRKLLESEECRMSGEFPSPVSISI 457

Query: 1655 VTNT 1666
            ++++
Sbjct: 458  ISSS 461


>ref|XP_543647.2| PREDICTED: similar to keratin 6 irs4 [Canis familiaris].
          Length = 619

 Score =  502 bits (1292), Expect = e-142
 Identities = 245/362 (67%), Positives = 313/362 (86%)
 Frame = +2

Query: 578  CPPGGIQEVTVNQSLLTPLNLQIDPTIQRVRTEEREQIKTLNNKFASFIDKVRFLEQQNK 757
            CPPGGI +VTVN+SLL PLN+++DP IQRVRT+EREQIK LNNKFASFIDKVRFLEQQN+
Sbjct: 193  CPPGGIHQVTVNRSLLAPLNVELDPEIQRVRTQEREQIKALNNKFASFIDKVRFLEQQNQ 252

Query: 758  VLDTKWTLLQEQGTKTVRQNLEPLFEQYINNLRRQLDSILGERGRLDSELRNMQDLVEDF 937
            VL+TKW LLQ+      R+NLEP+ E YI NLR+QL+++ G+R RLDSELR+++D+VED+
Sbjct: 253  VLETKWELLQQLDLNNCRKNLEPILEGYIGNLRKQLETLSGDRVRLDSELRSVRDVVEDY 312

Query: 938  KNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEAKVDALMDEINFTKMFFEAELSQM 1117
            K +YE EIN+RT AENEFV+LKKD DAAY  KVEL+AKVD+L  ++ F K  ++AE++Q+
Sbjct: 313  KKRYEVEINRRTAAENEFVVLKKDADAAYTVKVELQAKVDSLDKDLKFLKCLYDAEIAQI 372

Query: 1118 QTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIANRSRTEAESWYQTKYEELQQTAGR 1297
            QTH S+TSV+LSMDNNR+LDLDSII +++AQYE+IA +S+ EAE+ YQ+K +ELQ  AGR
Sbjct: 373  QTHASETSVILSMDNNRDLDLDSIITKIRAQYEEIALKSKAEAEALYQSKIQELQLAAGR 432

Query: 1298 HGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQNAIADAEQRGELALKDARNKLAE 1477
            HGDDL++TK+E+SE+NR+IQR+R EI NVKKQCANL+ AIADAEQRG+ ALKDAR KL E
Sbjct: 433  HGDDLKHTKNEMSELNRLIQRIRCEIANVKKQCANLETAIADAEQRGDCALKDARAKLDE 492

Query: 1478 LEDALQKAKQDMARLLREYQELMNTKLALDVEIATYRKLLEGEECKLSGEGVGPVNISVV 1657
            LE AL +AK+++AR+LREYQEL++ KLALD+EIATYRKLLEGEEC++SGE    V+ISV+
Sbjct: 493  LEAALHQAKEELARMLREYQELLSLKLALDMEIATYRKLLEGEECRMSGENPSSVSISVI 552

Query: 1658 TN 1663
            ++
Sbjct: 553  SS 554


  Database: RefSeq49_CP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,874,504
  Number of sequences in database:  33,336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 53,803,926
Number of extensions: 1388677
Number of successful extensions: 10422
Number of sequences better than 1.0e-05: 199
Number of HSP's gapped: 9766
Number of HSP's successfully gapped: 255
Length of query: 610
Length of database: 18,874,504
Length adjustment: 109
Effective length of query: 501
Effective length of database: 15,240,880
Effective search space: 7635680880
Effective search space used: 7635680880
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-007305
         (1830 letters)

Database: RefSeq49_HP.fasta 
           32,964 sequences; 18,297,164 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_000415.2| keratin, type II cytoskeletal 5 [Homo sapiens].      699   0.0  
Alignment   gi|NP_005545.1| keratin, type II cytoskeletal 6A [Homo sapiens].     644   0.0  
Alignment   gi|NP_005546.2| keratin, type II cytoskeletal 6B [Homo sapiens].     642   0.0  
Alignment   gi|NP_775109.2| keratin, type II cytoskeletal 6C [Homo sapiens].     641   0.0  
Alignment   gi|NP_004684.2| keratin, type II cytoskeletal 75 [Homo sapiens].     620   e-177
Alignment   gi|NP_476429.2| keratin, type II cytoskeletal 3 [Homo sapiens].      542   e-154
Alignment   gi|NP_002263.3| keratin, type II cytoskeletal 4 [Homo sapiens].      534   e-152
Alignment   gi|NP_787028.1| keratin, type II cytoskeletal 79 [Homo sapiens].     530   e-150
Alignment   gi|NP_006112.3| keratin, type II cytoskeletal 1 [Homo sapiens].      530   e-150
Alignment   gi|NP_056932.2| keratin, type II cytoskeletal 2 oral [Homo sapi...   528   e-150

>ref|NP_000415.2| keratin, type II cytoskeletal 5 [Homo sapiens].
          Length = 590

 Score =  699 bits (1805), Expect = 0.0
 Identities = 356/365 (97%), Positives = 364/365 (99%)
 Frame = +2

Query: 572  PVCPPGGIQEVTVNQSLLTPLNLQIDPTIQRVRTEEREQIKTLNNKFASFIDKVRFLEQQ 751
            PVCPPGGIQEVTVNQSLLTPLNLQIDP+IQRVRTEEREQIKTLNNKFASFIDKVRFLEQQ
Sbjct: 133  PVCPPGGIQEVTVNQSLLTPLNLQIDPSIQRVRTEEREQIKTLNNKFASFIDKVRFLEQQ 192

Query: 752  NKVLDTKWTLLQEQGTKTVRQNLEPLFEQYINNLRRQLDSILGERGRLDSELRNMQDLVE 931
            NKVLDTKWTLLQEQGTKTVRQNLEPLFEQYINNLRRQLDSI+GERGRLDSELRNMQDLVE
Sbjct: 193  NKVLDTKWTLLQEQGTKTVRQNLEPLFEQYINNLRRQLDSIVGERGRLDSELRNMQDLVE 252

Query: 932  DFKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEAKVDALMDEINFTKMFFEAELS 1111
            DFKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEAKVDALMDEINF KMFF+AELS
Sbjct: 253  DFKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEAKVDALMDEINFMKMFFDAELS 312

Query: 1112 QMQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIANRSRTEAESWYQTKYEELQQTA 1291
            QMQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYE+IANRSRTEAESWYQTKYEELQQTA
Sbjct: 313  QMQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEEIANRSRTEAESWYQTKYEELQQTA 372

Query: 1292 GRHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQNAIADAEQRGELALKDARNKL 1471
            GRHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQNAIADAEQRGELALKDARNKL
Sbjct: 373  GRHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQNAIADAEQRGELALKDARNKL 432

Query: 1472 AELEDALQKAKQDMARLLREYQELMNTKLALDVEIATYRKLLEGEECKLSGEGVGPVNIS 1651
            AELE+ALQKAKQDMARLLREYQELMNTKLALDVEIATYRKLLEGEEC+LSGEGVGPVNIS
Sbjct: 433  AELEEALQKAKQDMARLLREYQELMNTKLALDVEIATYRKLLEGEECRLSGEGVGPVNIS 492

Query: 1652 VVTNT 1666
            VVT++
Sbjct: 493  VVTSS 497



 Score = 75.9 bits (185), Expect = 1e-13
 Identities = 45/76 (59%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
 Frame = +2

Query: 161 MSRQSSVSLRTGGSRSFSAASAITPXXXXXXXXXXXXXXXXXXXXXXXXXXX-ACGVGGY 337
           MSRQSSVS R+GGSRSFS ASAITP                            ACGVGGY
Sbjct: 1   MSRQSSVSFRSGGSRSFSTASAITPSVSRTSFTSVSRSGGGGGGGFGRVSLAGACGVGGY 60

Query: 338 GSRSLYNLGGSKRISI 385
           GSRSLYNLGGSKRISI
Sbjct: 61  GSRSLYNLGGSKRISI 76


>ref|NP_005545.1| keratin, type II cytoskeletal 6A [Homo sapiens].
          Length = 564

 Score =  644 bits (1661), Expect = 0.0
 Identities = 326/365 (89%), Positives = 345/365 (94%)
 Frame = +2

Query: 572  PVCPPGGIQEVTVNQSLLTPLNLQIDPTIQRVRTEEREQIKTLNNKFASFIDKVRFLEQQ 751
            PVCPPGGIQEVTVNQSLLTPLNLQIDPTIQRVR EEREQIKTLNNKFASFIDKVRFLEQQ
Sbjct: 128  PVCPPGGIQEVTVNQSLLTPLNLQIDPTIQRVRAEEREQIKTLNNKFASFIDKVRFLEQQ 187

Query: 752  NKVLDTKWTLLQEQGTKTVRQNLEPLFEQYINNLRRQLDSILGERGRLDSELRNMQDLVE 931
            NKVL+TKWTLLQEQGTKTVRQNLEPLFEQYINNLRRQLDSI+GERGRLDSELR MQDLVE
Sbjct: 188  NKVLETKWTLLQEQGTKTVRQNLEPLFEQYINNLRRQLDSIVGERGRLDSELRGMQDLVE 247

Query: 932  DFKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEAKVDALMDEINFTKMFFEAELS 1111
            DFKNKYEDEINKRT AENEFV LKKDVDAAYMNKVEL+AK D L DEINF +  ++AELS
Sbjct: 248  DFKNKYEDEINKRTAAENEFVTLKKDVDAAYMNKVELQAKADTLTDEINFLRALYDAELS 307

Query: 1112 QMQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIANRSRTEAESWYQTKYEELQQTA 1291
            QMQTH+SDTSVVLSMDNNRNLDLDSIIAEVKAQYE+IA RSR EAESWYQTKYEELQ TA
Sbjct: 308  QMQTHISDTSVVLSMDNNRNLDLDSIIAEVKAQYEEIAQRSRAEAESWYQTKYEELQVTA 367

Query: 1292 GRHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQNAIADAEQRGELALKDARNKL 1471
            GRHGDDLRNTK EI+E+NRMIQRLR+EID+VKKQCANLQ AIADAEQRGE+ALKDA+NKL
Sbjct: 368  GRHGDDLRNTKQEIAEINRMIQRLRSEIDHVKKQCANLQAAIADAEQRGEMALKDAKNKL 427

Query: 1472 AELEDALQKAKQDMARLLREYQELMNTKLALDVEIATYRKLLEGEECKLSGEGVGPVNIS 1651
              LEDALQKAKQD+ARLL+EYQELMN KLALDVEIATYRKLLEGEEC+L+GEGVG VNIS
Sbjct: 428  EGLEDALQKAKQDLARLLKEYQELMNVKLALDVEIATYRKLLEGEECRLNGEGVGQVNIS 487

Query: 1652 VVTNT 1666
            VV +T
Sbjct: 488  VVQST 492


>ref|NP_005546.2| keratin, type II cytoskeletal 6B [Homo sapiens].
          Length = 564

 Score =  642 bits (1656), Expect = 0.0
 Identities = 325/365 (89%), Positives = 344/365 (94%)
 Frame = +2

Query: 572  PVCPPGGIQEVTVNQSLLTPLNLQIDPTIQRVRTEEREQIKTLNNKFASFIDKVRFLEQQ 751
            PVCPPGGIQEVTVNQSLLTPLNLQIDP IQRVR EEREQIKTLNNKFASFIDKVRFLEQQ
Sbjct: 128  PVCPPGGIQEVTVNQSLLTPLNLQIDPAIQRVRAEEREQIKTLNNKFASFIDKVRFLEQQ 187

Query: 752  NKVLDTKWTLLQEQGTKTVRQNLEPLFEQYINNLRRQLDSILGERGRLDSELRNMQDLVE 931
            NKVLDTKWTLLQEQGTKTVRQNLEPLFEQYINNLRRQLD+I+GERGRLDSELRNMQDLVE
Sbjct: 188  NKVLDTKWTLLQEQGTKTVRQNLEPLFEQYINNLRRQLDNIVGERGRLDSELRNMQDLVE 247

Query: 932  DFKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEAKVDALMDEINFTKMFFEAELS 1111
            D KNKYEDEINKRT AENEFV LKKDVDAAYMNKVEL+AK D L DEINF +  ++AELS
Sbjct: 248  DLKNKYEDEINKRTAAENEFVTLKKDVDAAYMNKVELQAKADTLTDEINFLRALYDAELS 307

Query: 1112 QMQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIANRSRTEAESWYQTKYEELQQTA 1291
            QMQTH+SDTSVVLSMDNNRNLDLDSIIAEVKAQYE+IA RSR EAESWYQTKYEELQ TA
Sbjct: 308  QMQTHISDTSVVLSMDNNRNLDLDSIIAEVKAQYEEIAQRSRAEAESWYQTKYEELQITA 367

Query: 1292 GRHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQNAIADAEQRGELALKDARNKL 1471
            GRHGDDLRNTK EI+E+NRMIQRLR+EID+VKKQCANLQ AIADAEQRGE+ALKDA+NKL
Sbjct: 368  GRHGDDLRNTKQEIAEINRMIQRLRSEIDHVKKQCANLQAAIADAEQRGEMALKDAKNKL 427

Query: 1472 AELEDALQKAKQDMARLLREYQELMNTKLALDVEIATYRKLLEGEECKLSGEGVGPVNIS 1651
              LEDALQKAKQD+ARLL+EYQELMN KLALDVEIATYRKLLEGEEC+L+GEGVG VNIS
Sbjct: 428  EGLEDALQKAKQDLARLLKEYQELMNVKLALDVEIATYRKLLEGEECRLNGEGVGQVNIS 487

Query: 1652 VVTNT 1666
            VV +T
Sbjct: 488  VVQST 492


>ref|NP_775109.2| keratin, type II cytoskeletal 6C [Homo sapiens].
          Length = 564

 Score =  641 bits (1654), Expect = 0.0
 Identities = 324/365 (88%), Positives = 344/365 (94%)
 Frame = +2

Query: 572  PVCPPGGIQEVTVNQSLLTPLNLQIDPTIQRVRTEEREQIKTLNNKFASFIDKVRFLEQQ 751
            PVCPPGGIQEVTVNQSLLTPLNLQIDP IQRVR EEREQIKTLNNKFASFIDKVRFLEQQ
Sbjct: 128  PVCPPGGIQEVTVNQSLLTPLNLQIDPAIQRVRAEEREQIKTLNNKFASFIDKVRFLEQQ 187

Query: 752  NKVLDTKWTLLQEQGTKTVRQNLEPLFEQYINNLRRQLDSILGERGRLDSELRNMQDLVE 931
            NKVLDTKWTLLQEQGTKTVRQNLEPLFEQYINNLRRQLDSI+GERGRLDSELRNMQDLVE
Sbjct: 188  NKVLDTKWTLLQEQGTKTVRQNLEPLFEQYINNLRRQLDSIVGERGRLDSELRNMQDLVE 247

Query: 932  DFKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEAKVDALMDEINFTKMFFEAELS 1111
            D KNKYEDEINKRT AENEFV LKKDVDAAYMNKVEL+AK D L DEINF +  ++AELS
Sbjct: 248  DLKNKYEDEINKRTAAENEFVTLKKDVDAAYMNKVELQAKADTLTDEINFLRALYDAELS 307

Query: 1112 QMQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIANRSRTEAESWYQTKYEELQQTA 1291
            QMQTH+SDTSVVLSMDNNRNLDLDSIIAEVKAQYE+IA RSR EAESWYQTKYEELQ TA
Sbjct: 308  QMQTHISDTSVVLSMDNNRNLDLDSIIAEVKAQYEEIAQRSRAEAESWYQTKYEELQVTA 367

Query: 1292 GRHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQNAIADAEQRGELALKDARNKL 1471
            GRHGDDLRNTK EI+E+NRMIQRLR+EID+VKKQCA+LQ AIADAEQRGE+ALKDA+NKL
Sbjct: 368  GRHGDDLRNTKQEIAEINRMIQRLRSEIDHVKKQCASLQAAIADAEQRGEMALKDAKNKL 427

Query: 1472 AELEDALQKAKQDMARLLREYQELMNTKLALDVEIATYRKLLEGEECKLSGEGVGPVNIS 1651
              LEDALQKAKQD+ARLL+EYQELMN KLALDVEIATYRKLLEGEEC+L+GEGVG VN+S
Sbjct: 428  EGLEDALQKAKQDLARLLKEYQELMNVKLALDVEIATYRKLLEGEECRLNGEGVGQVNVS 487

Query: 1652 VVTNT 1666
            VV +T
Sbjct: 488  VVQST 492


>ref|NP_004684.2| keratin, type II cytoskeletal 75 [Homo sapiens].
          Length = 551

 Score =  620 bits (1599), Expect = e-177
 Identities = 317/365 (86%), Positives = 339/365 (92%)
 Frame = +2

Query: 572  PVCPPGGIQEVTVNQSLLTPLNLQIDPTIQRVRTEEREQIKTLNNKFASFIDKVRFLEQQ 751
            PVCPPGGIQEVTVNQSLLTPL+LQIDPTIQRVR EEREQIKTLNNKFASFIDKVRFLEQQ
Sbjct: 114  PVCPPGGIQEVTVNQSLLTPLHLQIDPTIQRVRAEEREQIKTLNNKFASFIDKVRFLEQQ 173

Query: 752  NKVLDTKWTLLQEQGTKTVRQNLEPLFEQYINNLRRQLDSILGERGRLDSELRNMQDLVE 931
            NKVL+TKW LLQEQG++TVRQNLEPLF+ Y + LRRQL+SI  ERGRL++ELRNMQD+VE
Sbjct: 174  NKVLETKWALLQEQGSRTVRQNLEPLFDSYTSELRRQLESITTERGRLEAELRNMQDVVE 233

Query: 932  DFKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEAKVDALMDEINFTKMFFEAELS 1111
            DFK +YEDEINKRT AENEFV LKKDVDAAYMNKVELEAKV +L +EINF    F+AELS
Sbjct: 234  DFKVRYEDEINKRTAAENEFVALKKDVDAAYMNKVELEAKVKSLPEEINFIHSVFDAELS 293

Query: 1112 QMQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIANRSRTEAESWYQTKYEELQQTA 1291
            Q+QT V DTSVVLSMDNNRNLDLDSIIAEVKAQYEDIANRSR EAESWYQTKYEELQ TA
Sbjct: 294  QLQTQVGDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIANRSRAEAESWYQTKYEELQVTA 353

Query: 1292 GRHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQNAIADAEQRGELALKDARNKL 1471
            GRHGDDLRNTK EISEMNRMIQRLRAEID+VKKQC++LQ AIADAEQRGELALKDAR KL
Sbjct: 354  GRHGDDLRNTKQEISEMNRMIQRLRAEIDSVKKQCSSLQTAIADAEQRGELALKDARAKL 413

Query: 1472 AELEDALQKAKQDMARLLREYQELMNTKLALDVEIATYRKLLEGEECKLSGEGVGPVNIS 1651
             +LE+ALQKAKQDMARLLREYQELMN KLALDVEIATYRKLLEGEEC+LSGEGV PVNIS
Sbjct: 414  VDLEEALQKAKQDMARLLREYQELMNIKLALDVEIATYRKLLEGEECRLSGEGVSPVNIS 473

Query: 1652 VVTNT 1666
            VVT+T
Sbjct: 474  VVTST 478


>ref|NP_476429.2| keratin, type II cytoskeletal 3 [Homo sapiens].
          Length = 628

 Score =  542 bits (1396), Expect = e-154
 Identities = 279/363 (76%), Positives = 320/363 (88%), Gaps = 2/363 (0%)
 Frame = +2

Query: 584  PGGIQEVTVNQSLLTPLNLQIDPTIQRVRTEEREQIKTLNNKFASFIDKVRFLEQQNKVL 763
            PGGIQEVT+NQSLL PLN++IDP I +V+ +EREQIKTLNNKFASFIDKVRFLEQQNKVL
Sbjct: 167  PGGIQEVTINQSLLQPLNVEIDPQIGQVKAQEREQIKTLNNKFASFIDKVRFLEQQNKVL 226

Query: 764  DTKWTLLQEQGTKTVR--QNLEPLFEQYINNLRRQLDSILGERGRLDSELRNMQDLVEDF 937
            +TKW LLQ+QGT ++    NLEPLFE +IN LR  LD+ILGERGRLDSEL+NM+DLVEDF
Sbjct: 227  ETKWNLLQQQGTSSISGTNNLEPLFENHINYLRSYLDNILGERGRLDSELKNMEDLVEDF 286

Query: 938  KNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEAKVDALMDEINFTKMFFEAELSQM 1117
            K KYEDEINKRT AENEFV LKKDVD+AYMNKVEL+AKVDAL+DEI+F +  ++AELSQM
Sbjct: 287  KKKYEDEINKRTAAENEFVTLKKDVDSAYMNKVELQAKVDALIDEIDFLRTLYDAELSQM 346

Query: 1118 QTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIANRSRTEAESWYQTKYEELQQTAGR 1297
            Q+H+SDTSVVLSMDNNR+LDLDSIIAEV+AQYEDIA RS+ EAE+ YQTK  ELQ TAGR
Sbjct: 347  QSHISDTSVVLSMDNNRSLDLDSIIAEVRAQYEDIAQRSKAEAEALYQTKLGELQTTAGR 406

Query: 1298 HGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQNAIADAEQRGELALKDARNKLAE 1477
            HGDDLRNTK EI E+NRMIQRLRAEI+ VKKQ ANLQ AIA+AEQ GE+ALKDA  KL E
Sbjct: 407  HGDDLRNTKSEIIELNRMIQRLRAEIEGVKKQNANLQTAIAEAEQHGEMALKDANAKLQE 466

Query: 1478 LEDALQKAKQDMARLLREYQELMNTKLALDVEIATYRKLLEGEECKLSGEGVGPVNISVV 1657
            L+ ALQ+AK D+ARLLR+YQELMN KLALDVEIATYRKLLEGEE ++SGE    V+ISVV
Sbjct: 467  LQAALQQAKDDLARLLRDYQELMNVKLALDVEIATYRKLLEGEEYRMSGECPSAVSISVV 526

Query: 1658 TNT 1666
            +++
Sbjct: 527  SSS 529


>ref|NP_002263.3| keratin, type II cytoskeletal 4 [Homo sapiens].
          Length = 520

 Score =  534 bits (1376), Expect = e-152
 Identities = 268/365 (73%), Positives = 322/365 (88%)
 Frame = +2

Query: 572  PVCPPGGIQEVTVNQSLLTPLNLQIDPTIQRVRTEEREQIKTLNNKFASFIDKVRFLEQQ 751
            PVCP GGIQEVT+NQSLLTPL+++IDP IQ+VRTEEREQIK LNNKFASFIDKV+FLEQQ
Sbjct: 102  PVCPAGGIQEVTINQSLLTPLHVEIDPEIQKVRTEEREQIKLLNNKFASFIDKVQFLEQQ 161

Query: 752  NKVLDTKWTLLQEQGTKTVRQNLEPLFEQYINNLRRQLDSILGERGRLDSELRNMQDLVE 931
            NKVL+TKW LLQ+Q T T  +NLEPLFE Y++ LR+QLD++  ++GRL SEL+ MQD VE
Sbjct: 162  NKVLETKWNLLQQQTTTTSSKNLEPLFETYLSVLRKQLDTLGNDKGRLQSELKTMQDSVE 221

Query: 932  DFKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEAKVDALMDEINFTKMFFEAELS 1111
            DFK KYE+EINKRT AEN+FV+LKKDVDAAY+NKVELEAKVD+L DEINF K+ ++AELS
Sbjct: 222  DFKTKYEEEINKRTAAENDFVVLKKDVDAAYLNKVELEAKVDSLNDEINFLKVLYDAELS 281

Query: 1112 QMQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIANRSRTEAESWYQTKYEELQQTA 1291
            QMQTHVSDTSVVLSMDNNRNLDLDSIIAEV+AQYE+IA RS+ EAE+ YQTK ++LQ + 
Sbjct: 282  QMQTHVSDTSVVLSMDNNRNLDLDSIIAEVRAQYEEIAQRSKAEAEALYQTKVQQLQISV 341

Query: 1292 GRHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQNAIADAEQRGELALKDARNKL 1471
             +HGD+L+NTK EI+E+NRMIQRLRAEI+N+KKQC  LQ ++ADAEQRGE ALKDA +K 
Sbjct: 342  DQHGDNLKNTKSEIAELNRMIQRLRAEIENIKKQCQTLQVSVADAEQRGENALKDAHSKR 401

Query: 1472 AELEDALQKAKQDMARLLREYQELMNTKLALDVEIATYRKLLEGEECKLSGEGVGPVNIS 1651
             ELE ALQ+AK+++AR+LREYQELM+ KLALD+EIATYRKLLEGEE ++SGE    V+IS
Sbjct: 402  VELEAALQQAKEELARMLREYQELMSVKLALDIEIATYRKLLEGEEYRMSGECQSAVSIS 461

Query: 1652 VVTNT 1666
            VV+ +
Sbjct: 462  VVSGS 466


>ref|NP_787028.1| keratin, type II cytoskeletal 79 [Homo sapiens].
          Length = 535

 Score =  530 bits (1366), Expect = e-150
 Identities = 270/367 (73%), Positives = 310/367 (84%), Gaps = 2/367 (0%)
 Frame = +2

Query: 572  PVCPPGGIQEVTVNQSLLTPLNLQIDPTIQRVRTEEREQIKTLNNKFASFIDKVRFLEQQ 751
            P CPPGGIQEVTVNQSLLTPL+++IDP IQRVRT+EREQIKTLNNKFASFIDKVRFLEQQ
Sbjct: 107  PACPPGGIQEVTVNQSLLTPLHVEIDPEIQRVRTQEREQIKTLNNKFASFIDKVRFLEQQ 166

Query: 752  NKVLDTKWTLLQEQGTK--TVRQNLEPLFEQYINNLRRQLDSILGERGRLDSELRNMQDL 925
            NKVL+TKW LLQEQG      R NLEPLFE Y+ ++R  LD +  ERGRLDSELRN+QDL
Sbjct: 167  NKVLETKWALLQEQGQNLGVTRNNLEPLFEAYLGSMRSTLDRLQSERGRLDSELRNVQDL 226

Query: 926  VEDFKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEAKVDALMDEINFTKMFFEAE 1105
            VEDFKNKYEDEINK T AENEFV+LKKDVDAAYM +++L  KV  L  EI+F +  +E E
Sbjct: 227  VEDFKNKYEDEINKHTAAENEFVVLKKDVDAAYMGRMDLHGKVGTLTQEIDFLQQLYEME 286

Query: 1106 LSQMQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIANRSRTEAESWYQTKYEELQQ 1285
            LSQ+QTHVS+T+VVLSMDNNRNLDLDSIIAEVKAQYE IA RSR EAE+WYQTKYEELQ 
Sbjct: 287  LSQVQTHVSNTNVVLSMDNNRNLDLDSIIAEVKAQYELIAQRSRAEAEAWYQTKYEELQV 346

Query: 1286 TAGRHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQNAIADAEQRGELALKDARN 1465
            TAG+HGD+LR+TK+EI+E+ R IQRL+ E D  KKQC  LQ AIA+AEQRGELALKDA+ 
Sbjct: 347  TAGKHGDNLRDTKNEIAELTRTIQRLQGEADAAKKQCQQLQTAIAEAEQRGELALKDAQK 406

Query: 1466 KLAELEDALQKAKQDMARLLREYQELMNTKLALDVEIATYRKLLEGEECKLSGEGVGPVN 1645
            KL +L+ AL +AK+D+ RLLR+YQELMN KLALDVEIATYRKLLE EE ++SGE    V+
Sbjct: 407  KLGDLDVALHQAKEDLTRLLRDYQELMNVKLALDVEIATYRKLLESEESRMSGECPSAVS 466

Query: 1646 ISVVTNT 1666
            ISV  N+
Sbjct: 467  ISVTGNS 473


>ref|NP_006112.3| keratin, type II cytoskeletal 1 [Homo sapiens].
          Length = 644

 Score =  530 bits (1365), Expect = e-150
 Identities = 263/364 (72%), Positives = 318/364 (87%)
 Frame = +2

Query: 572  PVCPPGGIQEVTVNQSLLTPLNLQIDPTIQRVRTEEREQIKTLNNKFASFIDKVRFLEQQ 751
            PVCPPGGIQEVT+NQSLL PLN++IDP IQ+V++ EREQIK+LNN+FASFIDKVRFLEQQ
Sbjct: 145  PVCPPGGIQEVTINQSLLQPLNVEIDPEIQKVKSREREQIKSLNNQFASFIDKVRFLEQQ 204

Query: 752  NKVLDTKWTLLQEQGTKTVRQNLEPLFEQYINNLRRQLDSILGERGRLDSELRNMQDLVE 931
            N+VL TKW LLQ+  T T   NLEP FE +INNLRR++D +  ++ RLDSEL+NMQD+VE
Sbjct: 205  NQVLQTKWELLQQVDTSTRTHNLEPYFESFINNLRRRVDQLKSDQSRLDSELKNMQDMVE 264

Query: 932  DFKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEAKVDALMDEINFTKMFFEAELS 1111
            D++NKYEDEINKRT AENEFV +KKDVD AYM KV+L+AK+D L  EI+F    ++AELS
Sbjct: 265  DYRNKYEDEINKRTNAENEFVTIKKDVDGAYMTKVDLQAKLDNLQQEIDFLTALYQAELS 324

Query: 1112 QMQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIANRSRTEAESWYQTKYEELQQTA 1291
            QMQT +S+T+V+LSMDNNR+LDLDSIIAEVKAQYEDIA +S+ EAES YQ+KYEELQ TA
Sbjct: 325  QMQTQISETNVILSMDNNRSLDLDSIIAEVKAQYEDIAQKSKAEAESLYQSKYEELQITA 384

Query: 1292 GRHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQNAIADAEQRGELALKDARNKL 1471
            GRHGD +RN+K EISE+NR+IQRLR+EIDNVKKQ +NLQ +I+DAEQRGE ALKDA+NKL
Sbjct: 385  GRHGDSVRNSKIEISELNRVIQRLRSEIDNVKKQISNLQQSISDAEQRGENALKDAKNKL 444

Query: 1472 AELEDALQKAKQDMARLLREYQELMNTKLALDVEIATYRKLLEGEECKLSGEGVGPVNIS 1651
             +LEDALQ+AK+D+ARLLR+YQELMNTKLALD+EIATYR LLEGEE ++SGE    V++S
Sbjct: 445  NDLEDALQQAKEDLARLLRDYQELMNTKLALDLEIATYRTLLEGEESRMSGECAPNVSVS 504

Query: 1652 VVTN 1663
            V T+
Sbjct: 505  VSTS 508


>ref|NP_056932.2| keratin, type II cytoskeletal 2 oral [Homo sapiens].
          Length = 638

 Score =  528 bits (1359), Expect = e-150
 Identities = 273/360 (75%), Positives = 312/360 (86%)
 Frame = +2

Query: 584  PGGIQEVTVNQSLLTPLNLQIDPTIQRVRTEEREQIKTLNNKFASFIDKVRFLEQQNKVL 763
            PGGIQEV VNQSLL PLN++IDP I +V+ +EREQIKTLNNKFASFIDKVRFLEQQNKVL
Sbjct: 152  PGGIQEVIVNQSLLQPLNVEIDPQIGQVKAQEREQIKTLNNKFASFIDKVRFLEQQNKVL 211

Query: 764  DTKWTLLQEQGTKTVRQNLEPLFEQYINNLRRQLDSILGERGRLDSELRNMQDLVEDFKN 943
            +TKW LLQ+Q T +   +LEP FE YI+ L +QLDS+LGERG L+ EL++MQDLVEDFK 
Sbjct: 212  ETKWELLQQQTTGSGPSSLEPCFESYISFLCKQLDSLLGERGNLEGELKSMQDLVEDFKK 271

Query: 944  KYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEAKVDALMDEINFTKMFFEAELSQMQT 1123
            KYEDEINKRT AENEFV LKKDVDAA+MNKVEL+AKVD+L DE++F +  +E ELSQMQ+
Sbjct: 272  KYEDEINKRTAAENEFVGLKKDVDAAFMNKVELQAKVDSLTDEVSFLRTLYEMELSQMQS 331

Query: 1124 HVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIANRSRTEAESWYQTKYEELQQTAGRHG 1303
            H SDTSVVLSMDNNR LDL SIIAEV+AQYE+IA RS++EAE+ YQTK  ELQ TAGRHG
Sbjct: 332  HASDTSVVLSMDNNRCLDLGSIIAEVRAQYEEIAQRSKSEAEALYQTKLGELQTTAGRHG 391

Query: 1304 DDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQNAIADAEQRGELALKDARNKLAELE 1483
            DDLRNTK EI E+NRMIQRLRAEI+NVKKQ ANLQ AIA+AEQRGE+ALKDA  KL +L+
Sbjct: 392  DDLRNTKSEIMELNRMIQRLRAEIENVKKQNANLQTAIAEAEQRGEMALKDANAKLQDLQ 451

Query: 1484 DALQKAKQDMARLLREYQELMNTKLALDVEIATYRKLLEGEECKLSGEGVGPVNISVVTN 1663
             ALQKAK D+ARLLR+YQELMN KLALDVEIATYRKLLEGEEC++SGE    V ISVV+N
Sbjct: 452  TALQKAKDDLARLLRDYQELMNVKLALDVEIATYRKLLEGEECRMSGECQSAVCISVVSN 511


  Database: RefSeq49_HP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,297,164
  Number of sequences in database:  32,964
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 52,637,465
Number of extensions: 1349146
Number of successful extensions: 9057
Number of sequences better than 1.0e-05: 119
Number of HSP's gapped: 8689
Number of HSP's successfully gapped: 134
Length of query: 610
Length of database: 18,297,164
Length adjustment: 108
Effective length of query: 502
Effective length of database: 14,737,052
Effective search space: 7398000104
Effective search space used: 7398000104
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-007305
         (1830 letters)

Database: RefSeq49_MP.fasta 
           30,036 sequences; 15,617,559 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_081287.1| keratin, type II cytoskeletal 5 [Mus musculus].      689   0.0  
Alignment   gi|NP_032502.3| keratin, type II cytoskeletal 6A [Mus musculus].     643   0.0  
Alignment   gi|NP_034799.2| keratin, type II cytoskeletal 6B [Mus musculus].     637   0.0  
Alignment   gi|NP_579935.1| keratin, type II cytoskeletal 75 [Mus musculus].     620   e-177
Alignment   gi|NP_808385.2| hypothetical protein LOC239673 [Mus musculus].       575   e-164
Alignment   gi|NP_032501.2| keratin, type II cytoskeletal 4 [Mus musculus].      537   e-153
Alignment   gi|NP_001003670.1| type II keratin Kb14 [Mus musculus].              529   e-150
Alignment   gi|NP_666175.1| keratin, type II cytoskeletal 79 [Mus musculus].     525   e-149
Alignment   gi|NP_001028349.1| keratin, type II cytoskeletal 2 oral [Mus mu...   522   e-148
Alignment   gi|NP_997650.1| keratin, type II cytoskeletal 73 [Mus musculus].     514   e-146

>ref|NP_081287.1| keratin, type II cytoskeletal 5 [Mus musculus].
          Length = 580

 Score =  689 bits (1779), Expect = 0.0
 Identities = 347/365 (95%), Positives = 361/365 (98%)
 Frame = +2

Query: 572  PVCPPGGIQEVTVNQSLLTPLNLQIDPTIQRVRTEEREQIKTLNNKFASFIDKVRFLEQQ 751
            PVCPPGGIQEVTVNQ+LLTPLNLQIDPTIQRVRTEEREQIKTLNNKFASFIDKVRFLEQQ
Sbjct: 127  PVCPPGGIQEVTVNQNLLTPLNLQIDPTIQRVRTEEREQIKTLNNKFASFIDKVRFLEQQ 186

Query: 752  NKVLDTKWTLLQEQGTKTVRQNLEPLFEQYINNLRRQLDSILGERGRLDSELRNMQDLVE 931
            NKVLDTKW LLQEQGTKT++QNL+PLFEQYINNLRRQLD +LGERGRLDSELRNMQDLVE
Sbjct: 187  NKVLDTKWALLQEQGTKTIKQNLDPLFEQYINNLRRQLDGVLGERGRLDSELRNMQDLVE 246

Query: 932  DFKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEAKVDALMDEINFTKMFFEAELS 1111
            D+KNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEA+VDALMDEINF KMFF+AELS
Sbjct: 247  DYKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEARVDALMDEINFMKMFFDAELS 306

Query: 1112 QMQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIANRSRTEAESWYQTKYEELQQTA 1291
            QMQTHVSDTSVVLSMDNNR+LDLDSIIAEVKAQYEDIANRSRTEAESWYQTKYEELQQTA
Sbjct: 307  QMQTHVSDTSVVLSMDNNRSLDLDSIIAEVKAQYEDIANRSRTEAESWYQTKYEELQQTA 366

Query: 1292 GRHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQNAIADAEQRGELALKDARNKL 1471
            GRHGDDLRNTKHEISEMNRMIQRLR+EIDNVKKQCANLQNAIA+AEQRGELALKDARNKL
Sbjct: 367  GRHGDDLRNTKHEISEMNRMIQRLRSEIDNVKKQCANLQNAIAEAEQRGELALKDARNKL 426

Query: 1472 AELEDALQKAKQDMARLLREYQELMNTKLALDVEIATYRKLLEGEECKLSGEGVGPVNIS 1651
             ELE+ALQKAKQDMARLLREYQELMNTKLALDVEIATYRKLLEGEEC+LSGEGVGPVNIS
Sbjct: 427  TELEEALQKAKQDMARLLREYQELMNTKLALDVEIATYRKLLEGEECRLSGEGVGPVNIS 486

Query: 1652 VVTNT 1666
            VVTN+
Sbjct: 487  VVTNS 491



 Score = 73.6 bits (179), Expect = 5e-13
 Identities = 43/74 (58%), Positives = 45/74 (60%)
 Frame = +2

Query: 161 MSRQSSVSLRTGGSRSFSAASAITPXXXXXXXXXXXXXXXXXXXXXXXXXXXACGVGGYG 340
           MSRQSSVS R+GGSRSFSAASAITP                           ACG GGYG
Sbjct: 1   MSRQSSVSFRSGGSRSFSAASAITPSVSRTSFSSVSRSGGGGGGRISLGG--ACGAGGYG 58

Query: 341 SRSLYNLGGSKRIS 382
           SRSLYN+GGSKRIS
Sbjct: 59  SRSLYNVGGSKRIS 72


>ref|NP_032502.3| keratin, type II cytoskeletal 6A [Mus musculus].
          Length = 553

 Score =  643 bits (1659), Expect = 0.0
 Identities = 324/365 (88%), Positives = 346/365 (94%)
 Frame = +2

Query: 572  PVCPPGGIQEVTVNQSLLTPLNLQIDPTIQRVRTEEREQIKTLNNKFASFIDKVRFLEQQ 751
            PVCPPGGIQEVT+NQSLLTPLNLQIDPTIQRVRTEEREQIKTLNNKFASFIDKVRFLEQQ
Sbjct: 117  PVCPPGGIQEVTINQSLLTPLNLQIDPTIQRVRTEEREQIKTLNNKFASFIDKVRFLEQQ 176

Query: 752  NKVLDTKWTLLQEQGTKTVRQNLEPLFEQYINNLRRQLDSILGERGRLDSELRNMQDLVE 931
            NKVLDTKW LLQEQGTKTVRQNLEP+FEQYI+NLRRQLDSI+GERGRLDSELRNMQD VE
Sbjct: 177  NKVLDTKWALLQEQGTKTVRQNLEPMFEQYISNLRRQLDSIIGERGRLDSELRNMQDTVE 236

Query: 932  DFKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEAKVDALMDEINFTKMFFEAELS 1111
            D+K+KYEDEINKRT AENEFV LKKDVDAAYMNKVEL+AK D+L D+INF +  +EAELS
Sbjct: 237  DYKSKYEDEINKRTAAENEFVTLKKDVDAAYMNKVELQAKADSLTDDINFLRALYEAELS 296

Query: 1112 QMQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIANRSRTEAESWYQTKYEELQQTA 1291
            QMQTH+SDTSVVLSMDNNR+LDLDSIIAEVKAQYEDIA RSR EAESWYQTKYEELQ TA
Sbjct: 297  QMQTHISDTSVVLSMDNNRSLDLDSIIAEVKAQYEDIAQRSRAEAESWYQTKYEELQVTA 356

Query: 1292 GRHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQNAIADAEQRGELALKDARNKL 1471
            GRHGDDLRNTK EI+E+NRMIQRLR+EID+VKKQCANLQ AIADAEQRGE+ALKDAR KL
Sbjct: 357  GRHGDDLRNTKQEIAEINRMIQRLRSEIDHVKKQCANLQAAIADAEQRGEMALKDARGKL 416

Query: 1472 AELEDALQKAKQDMARLLREYQELMNTKLALDVEIATYRKLLEGEECKLSGEGVGPVNIS 1651
              LEDALQKAKQDMARLL+EYQELMN KLALDVEIATYRKLLEGEEC+L+GEGVGPVNIS
Sbjct: 417  EGLEDALQKAKQDMARLLKEYQELMNVKLALDVEIATYRKLLEGEECRLNGEGVGPVNIS 476

Query: 1652 VVTNT 1666
            VV +T
Sbjct: 477  VVQST 481


>ref|NP_034799.2| keratin, type II cytoskeletal 6B [Mus musculus].
          Length = 554

 Score =  637 bits (1644), Expect = 0.0
 Identities = 320/365 (87%), Positives = 346/365 (94%)
 Frame = +2

Query: 572  PVCPPGGIQEVTVNQSLLTPLNLQIDPTIQRVRTEEREQIKTLNNKFASFIDKVRFLEQQ 751
            PVCPPGGIQEVT+NQ+LLTPLN+QIDPTIQRVRTEEREQIKTLNNKFASFIDKVRFLEQQ
Sbjct: 117  PVCPPGGIQEVTINQNLLTPLNVQIDPTIQRVRTEEREQIKTLNNKFASFIDKVRFLEQQ 176

Query: 752  NKVLDTKWTLLQEQGTKTVRQNLEPLFEQYINNLRRQLDSILGERGRLDSELRNMQDLVE 931
            NKVLDTKW LLQEQGTKTVRQNLEP+FEQYI+NLRRQLDSI+GERGRLDSELRNMQD VE
Sbjct: 177  NKVLDTKWALLQEQGTKTVRQNLEPMFEQYISNLRRQLDSIIGERGRLDSELRNMQDTVE 236

Query: 932  DFKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEAKVDALMDEINFTKMFFEAELS 1111
            D+K+KYEDEINKRT AENEFV +KKDVDAAYM KVEL+AK D+L DEINF ++ +EAELS
Sbjct: 237  DYKSKYEDEINKRTKAENEFVTVKKDVDAAYMTKVELQAKADSLADEINFLRVIYEAELS 296

Query: 1112 QMQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIANRSRTEAESWYQTKYEELQQTA 1291
            QMQTH+SDTSVVLSMDNNR+LDLDSIIAEVKAQYEDIA RSR EAESWYQTKYEELQ TA
Sbjct: 297  QMQTHISDTSVVLSMDNNRSLDLDSIIAEVKAQYEDIAQRSRAEAESWYQTKYEELQVTA 356

Query: 1292 GRHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQNAIADAEQRGELALKDARNKL 1471
            GRHGDDLRNTK EI+E+NRMIQRLR+EID+VKKQCANLQ AIADAEQRGE+ALKDAR KL
Sbjct: 357  GRHGDDLRNTKQEIAEINRMIQRLRSEIDHVKKQCANLQAAIADAEQRGEMALKDARGKL 416

Query: 1472 AELEDALQKAKQDMARLLREYQELMNTKLALDVEIATYRKLLEGEECKLSGEGVGPVNIS 1651
              LEDALQKAKQ+MARLL+EYQELMN KLALDVEIATYRKLLEGEEC+L+GEGVGPVNIS
Sbjct: 417  EGLEDALQKAKQEMARLLKEYQELMNVKLALDVEIATYRKLLEGEECRLNGEGVGPVNIS 476

Query: 1652 VVTNT 1666
            VV +T
Sbjct: 477  VVQST 481


>ref|NP_579935.1| keratin, type II cytoskeletal 75 [Mus musculus].
          Length = 551

 Score =  620 bits (1598), Expect = e-177
 Identities = 316/364 (86%), Positives = 338/364 (92%)
 Frame = +2

Query: 575  VCPPGGIQEVTVNQSLLTPLNLQIDPTIQRVRTEEREQIKTLNNKFASFIDKVRFLEQQN 754
            VCP GGIQEVTVNQSLLTPLNLQIDPTIQRVR EEREQIKTLNNKFASFIDKVRFLEQQN
Sbjct: 116  VCPSGGIQEVTVNQSLLTPLNLQIDPTIQRVRKEEREQIKTLNNKFASFIDKVRFLEQQN 175

Query: 755  KVLDTKWTLLQEQGTKTVRQNLEPLFEQYINNLRRQLDSILGERGRLDSELRNMQDLVED 934
            KVL+TKW LLQEQG++TVRQNLEP F+ Y+N+LRRQLD I  ERGRLD+ELRNMQ++VED
Sbjct: 176  KVLETKWNLLQEQGSRTVRQNLEPFFDTYVNDLRRQLDGITAERGRLDAELRNMQEVVED 235

Query: 935  FKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEAKVDALMDEINFTKMFFEAELSQ 1114
            FK +YEDEINKR  AENEFV LKKDVD+AYMNKVELEAKVD+L D+INF +M +EAELSQ
Sbjct: 236  FKVRYEDEINKRAAAENEFVGLKKDVDSAYMNKVELEAKVDSLTDQINFYRMIYEAELSQ 295

Query: 1115 MQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIANRSRTEAESWYQTKYEELQQTAG 1294
            MQ  VSDTSVVLSMDNNR+LDLDSIIAEVKAQYEDIANRSR EAESWYQTKYEELQ TAG
Sbjct: 296  MQNQVSDTSVVLSMDNNRSLDLDSIIAEVKAQYEDIANRSRAEAESWYQTKYEELQVTAG 355

Query: 1295 RHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQNAIADAEQRGELALKDARNKLA 1474
            RHGDDLRNTK EISEMNRMIQRLR+EID VKKQC++LQ AI+DAEQRGELALKDAR KL 
Sbjct: 356  RHGDDLRNTKQEISEMNRMIQRLRSEIDAVKKQCSSLQTAISDAEQRGELALKDARAKLM 415

Query: 1475 ELEDALQKAKQDMARLLREYQELMNTKLALDVEIATYRKLLEGEECKLSGEGVGPVNISV 1654
            ELEDALQKAKQDMARLLREYQELMN KLALDVEIATYRKLLEGEEC+LSGEGV PVNISV
Sbjct: 416  ELEDALQKAKQDMARLLREYQELMNVKLALDVEIATYRKLLEGEECRLSGEGVSPVNISV 475

Query: 1655 VTNT 1666
            VT+T
Sbjct: 476  VTST 479


>ref|NP_808385.2| hypothetical protein LOC239673 [Mus musculus].
          Length = 538

 Score =  575 bits (1483), Expect = e-164
 Identities = 291/360 (80%), Positives = 333/360 (92%)
 Frame = +2

Query: 587  GGIQEVTVNQSLLTPLNLQIDPTIQRVRTEEREQIKTLNNKFASFIDKVRFLEQQNKVLD 766
            GGI EVTVNQSLLTPL+L+IDP++QRVR EE+EQIKTLNNKFASFIDKVRFLEQQNKVL+
Sbjct: 113  GGIHEVTVNQSLLTPLHLEIDPSLQRVRKEEKEQIKTLNNKFASFIDKVRFLEQQNKVLE 172

Query: 767  TKWTLLQEQGTKTVRQNLEPLFEQYINNLRRQLDSILGERGRLDSELRNMQDLVEDFKNK 946
            TKW+LLQE   KT R NLEP+FE YI NLRRQL+ + GER RL++EL++MQD+VEDFKNK
Sbjct: 173  TKWSLLQEH--KTTRTNLEPMFEAYITNLRRQLECLGGERSRLETELKSMQDVVEDFKNK 230

Query: 947  YEDEINKRTTAENEFVMLKKDVDAAYMNKVELEAKVDALMDEINFTKMFFEAELSQMQTH 1126
            YE+EI++RT AENEFV+LKKDVDAAYMNKVELEAKV+ALMDEINF + FFEAEL+Q+Q  
Sbjct: 231  YEEEIHRRTAAENEFVVLKKDVDAAYMNKVELEAKVEALMDEINFLRAFFEAELAQLQAQ 290

Query: 1127 VSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIANRSRTEAESWYQTKYEELQQTAGRHGD 1306
            +S+TSVVLSMDNNR+L+LDSIIAEVKAQYEDIANRSR EAESWYQTKYEELQ++AG+ GD
Sbjct: 291  ISETSVVLSMDNNRSLNLDSIIAEVKAQYEDIANRSRAEAESWYQTKYEELQRSAGQRGD 350

Query: 1307 DLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQNAIADAEQRGELALKDARNKLAELED 1486
            DLR TK EISE+NR +QRLR+EIDN+KKQCA LQ +IADAEQRGELALKDA+NKLAELED
Sbjct: 351  DLRTTKMEISELNRAMQRLRSEIDNLKKQCATLQASIADAEQRGELALKDAKNKLAELED 410

Query: 1487 ALQKAKQDMARLLREYQELMNTKLALDVEIATYRKLLEGEECKLSGEGVGPVNISVVTNT 1666
            ALQKAKQDMAR LREYQELMN KLALD+EIATYRKLLEGEEC+L+GEGVG VNISVV+++
Sbjct: 411  ALQKAKQDMARQLREYQELMNVKLALDIEIATYRKLLEGEECRLTGEGVGAVNISVVSSS 470


>ref|NP_032501.2| keratin, type II cytoskeletal 4 [Mus musculus].
          Length = 525

 Score =  537 bits (1384), Expect = e-153
 Identities = 269/362 (74%), Positives = 316/362 (87%)
 Frame = +2

Query: 572  PVCPPGGIQEVTVNQSLLTPLNLQIDPTIQRVRTEEREQIKTLNNKFASFIDKVRFLEQQ 751
            PVCP GGIQEVT+NQSLLTPL ++IDP IQ++RT EREQIKTLNNKFASFIDKVRFLEQQ
Sbjct: 111  PVCPAGGIQEVTINQSLLTPLQVEIDPEIQKIRTAEREQIKTLNNKFASFIDKVRFLEQQ 170

Query: 752  NKVLDTKWTLLQEQGTKTVRQNLEPLFEQYINNLRRQLDSILGERGRLDSELRNMQDLVE 931
            NKVL+TKW LLQ+Q T T  ++L+P FE YIN LR+ LD++  ++GRL SEL+ MQD VE
Sbjct: 171  NKVLETKWNLLQQQTTTTSPKSLDPFFETYINALRKNLDTLSNDKGRLQSELKMMQDSVE 230

Query: 932  DFKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEAKVDALMDEINFTKMFFEAELS 1111
            DFK KYE+EINKRT AEN+FV+LKKDVDAAYM KVELEAK+++L DEINFT++ +EAEL+
Sbjct: 231  DFKTKYEEEINKRTAAENDFVVLKKDVDAAYMIKVELEAKMESLKDEINFTRVLYEAELA 290

Query: 1112 QMQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIANRSRTEAESWYQTKYEELQQTA 1291
            QMQTHVSDTSVVLSMDNNRNLDLD IIAEV+AQYEDIA +S+ E ESWYQ K ++LQ +A
Sbjct: 291  QMQTHVSDTSVVLSMDNNRNLDLDGIIAEVRAQYEDIARKSKAEVESWYQIKVQQLQMSA 350

Query: 1292 GRHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQNAIADAEQRGELALKDARNKL 1471
             +HGD L+ TK+EISE+NRMIQRLRAEI+N+KKQ   LQ ++ADAEQRGELALKDA +K 
Sbjct: 351  DQHGDSLKTTKNEISELNRMIQRLRAEIENIKKQSQTLQASVADAEQRGELALKDAYSKR 410

Query: 1472 AELEDALQKAKQDMARLLREYQELMNTKLALDVEIATYRKLLEGEECKLSGEGVGPVNIS 1651
            AELE ALQKAK+D+ARLLR+YQ LMN KLALDVEIATYRKLLEGEEC++SGE    V+IS
Sbjct: 411  AELETALQKAKEDLARLLRDYQALMNVKLALDVEIATYRKLLEGEECRMSGECKSAVSIS 470

Query: 1652 VV 1657
            VV
Sbjct: 471  VV 472


>ref|NP_001003670.1| type II keratin Kb14 [Mus musculus].
          Length = 552

 Score =  529 bits (1363), Expect = e-150
 Identities = 268/365 (73%), Positives = 313/365 (85%)
 Frame = +2

Query: 572  PVCPPGGIQEVTVNQSLLTPLNLQIDPTIQRVRTEEREQIKTLNNKFASFIDKVRFLEQQ 751
            P  P GGIQEVT++QSLL PLNLQIDPTIQRVRTEEREQIKTLNN+FASFIDKV+FLEQQ
Sbjct: 117  PGYPSGGIQEVTISQSLLIPLNLQIDPTIQRVRTEEREQIKTLNNRFASFIDKVQFLEQQ 176

Query: 752  NKVLDTKWTLLQEQGTKTVRQNLEPLFEQYINNLRRQLDSILGERGRLDSELRNMQDLVE 931
            NKVLDTKW LLQEQGTKTV+  +E LFE YIN L R+L   + E+G LD+ELR  Q ++E
Sbjct: 177  NKVLDTKWALLQEQGTKTVKPEVETLFEDYINILSRRLGFTVAEKGHLDAELRRSQGVLE 236

Query: 932  DFKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEAKVDALMDEINFTKMFFEAELS 1111
            D+K KYEDEI+KRT AENEF+ LKKD DAA+M + EL AKV +L+DEINF +  F+AE+S
Sbjct: 237  DYKYKYEDEISKRTAAENEFLTLKKDADAAFMIENELTAKVHSLIDEINFLRTLFDAEMS 296

Query: 1112 QMQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIANRSRTEAESWYQTKYEELQQTA 1291
            QMQT +SDTSV++SMDNN +LD++SIIAEVK QYE+IA +S+ EAESWYQTKYEELQ TA
Sbjct: 297  QMQTPLSDTSVIISMDNNHSLDMESIIAEVKTQYENIAKKSQAEAESWYQTKYEELQVTA 356

Query: 1292 GRHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQNAIADAEQRGELALKDARNKL 1471
            GRHGDDLRNTK EI+E+NRMIQRLR+EID+VKKQCANLQ AIADAEQRGE+ALKDAR KL
Sbjct: 357  GRHGDDLRNTKQEIAEINRMIQRLRSEIDHVKKQCANLQAAIADAEQRGEMALKDARGKL 416

Query: 1472 AELEDALQKAKQDMARLLREYQELMNTKLALDVEIATYRKLLEGEECKLSGEGVGPVNIS 1651
              L+DA QKAKQD  RL +EYQEL++  + LDVEI TYRKLLEGEE + +GEG+GPVNIS
Sbjct: 417  EGLKDAPQKAKQDRTRLQKEYQELLSVNIYLDVEITTYRKLLEGEENRFNGEGIGPVNIS 476

Query: 1652 VVTNT 1666
            VV +T
Sbjct: 477  VVPST 481


>ref|NP_666175.1| keratin, type II cytoskeletal 79 [Mus musculus].
          Length = 531

 Score =  525 bits (1351), Expect = e-149
 Identities = 263/366 (71%), Positives = 312/366 (85%), Gaps = 1/366 (0%)
 Frame = +2

Query: 572  PVCPPGGIQEVTVNQSLLTPLNLQIDPTIQRVRTEEREQIKTLNNKFASFIDKVRFLEQQ 751
            PVCPPGGIQEVTVNQSLLTPLN++IDP IQRVRT+EREQIKTLNNKFASFIDKVRFLEQQ
Sbjct: 104  PVCPPGGIQEVTVNQSLLTPLNVEIDPEIQRVRTQEREQIKTLNNKFASFIDKVRFLEQQ 163

Query: 752  NKVLDTKWTLLQEQGTKT-VRQNLEPLFEQYINNLRRQLDSILGERGRLDSELRNMQDLV 928
            NKVL+TKW LLQEQ   T V ++LEP FE Y++ LRRQLD+   ERGRLD ELRN+QD +
Sbjct: 164  NKVLETKWALLQEQSQNTGVARSLEPFFENYLSTLRRQLDTKQSERGRLDMELRNVQDNL 223

Query: 929  EDFKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEAKVDALMDEINFTKMFFEAEL 1108
            EDFKNKYEDEINKRT  ENEFV+LKKDVDAAYM +++L  KVD+L  EI+F +  FE EL
Sbjct: 224  EDFKNKYEDEINKRTALENEFVLLKKDVDAAYMGRMDLHGKVDSLTQEIDFLQQLFEMEL 283

Query: 1109 SQMQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIANRSRTEAESWYQTKYEELQQT 1288
            SQ+QT+VSDT+V+LSMDNNRNLDLDSIIAEVKAQYE IA +SR EAESWYQTKYEELQ T
Sbjct: 284  SQVQTNVSDTNVILSMDNNRNLDLDSIIAEVKAQYELIAQKSRAEAESWYQTKYEELQVT 343

Query: 1289 AGRHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQNAIADAEQRGELALKDARNK 1468
            AG+HGD LR+TK+EI+E+ R  QRL+ E+D  KKQC  LQ AIA+AEQ GE+ALKDA+ K
Sbjct: 344  AGKHGDSLRDTKNEIAELTRTTQRLQGEVDAAKKQCQQLQTAIAEAEQNGEMALKDAKKK 403

Query: 1469 LAELEDALQKAKQDMARLLREYQELMNTKLALDVEIATYRKLLEGEECKLSGEGVGPVNI 1648
            L +L+ AL +AK+D+AR+LREYQ+L++ KLALD+EIATYRKLLE EE ++SG+    ++I
Sbjct: 404  LGDLDTALHQAKEDLARMLREYQDLVSVKLALDMEIATYRKLLESEESRMSGDCPSAISI 463

Query: 1649 SVVTNT 1666
            SV  N+
Sbjct: 464  SVTGNS 469


>ref|NP_001028349.1| keratin, type II cytoskeletal 2 oral [Mus musculus].
          Length = 594

 Score =  522 bits (1345), Expect = e-148
 Identities = 269/362 (74%), Positives = 313/362 (86%), Gaps = 2/362 (0%)
 Frame = +2

Query: 584  PGGIQEVTVNQSLLTPLNLQIDPTIQRVRTEEREQIKTLNNKFASFIDKVRFLEQQNKVL 763
            PGGIQEVT+NQSLL PLN++IDP I +V+ +EREQIKTLNNKFASFIDKVRFLEQQNKVL
Sbjct: 134  PGGIQEVTINQSLLQPLNVEIDPQIGQVKAQEREQIKTLNNKFASFIDKVRFLEQQNKVL 193

Query: 764  DTKWTLLQEQGTKTVR--QNLEPLFEQYINNLRRQLDSILGERGRLDSELRNMQDLVEDF 937
            +TKW LLQ+Q  ++    QNLEP FE YI+ LR+QLDS+LG +G L+ EL++MQDLVEDF
Sbjct: 194  ETKWELLQQQTIRSGSGPQNLEPFFESYISCLRKQLDSLLGAKGSLEGELKSMQDLVEDF 253

Query: 938  KNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEAKVDALMDEINFTKMFFEAELSQM 1117
            K KYE+EIN+RT AENEFV LKKDVD A+MNKVEL+AKVD+L DEINF +  ++ ELSQ+
Sbjct: 254  KKKYEEEINRRTAAENEFVGLKKDVDGAFMNKVELQAKVDSLTDEINFLRTLYDMELSQI 313

Query: 1118 QTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIANRSRTEAESWYQTKYEELQQTAGR 1297
            Q+HVSDTSVVLSMDNNR LDLDSIIAEVKAQYEDIA +S+ EAE+ YQTK  ELQ TAGR
Sbjct: 314  QSHVSDTSVVLSMDNNRCLDLDSIIAEVKAQYEDIAQKSKAEAEALYQTKLGELQTTAGR 373

Query: 1298 HGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQNAIADAEQRGELALKDARNKLAE 1477
            HGDDLR+TK EI ++NRMIQRLRAEI+NVKKQ  N+Q +IA+AEQRGE ALKDA  K  +
Sbjct: 374  HGDDLRSTKSEIMDLNRMIQRLRAEIENVKKQNTNMQTSIAEAEQRGERALKDADTKFQD 433

Query: 1478 LEDALQKAKQDMARLLREYQELMNTKLALDVEIATYRKLLEGEECKLSGEGVGPVNISVV 1657
            L+ ALQKAK+DMARLL+EYQELMN KLALDVEIATYRKLLEGEEC+LSGE    V+ISVV
Sbjct: 434  LQVALQKAKEDMARLLKEYQELMNVKLALDVEIATYRKLLEGEECRLSGEFQNAVSISVV 493

Query: 1658 TN 1663
            +N
Sbjct: 494  SN 495


>ref|NP_997650.1| keratin, type II cytoskeletal 73 [Mus musculus].
          Length = 539

 Score =  514 bits (1325), Expect = e-146
 Identities = 255/364 (70%), Positives = 318/364 (87%)
 Frame = +2

Query: 575  VCPPGGIQEVTVNQSLLTPLNLQIDPTIQRVRTEEREQIKTLNNKFASFIDKVRFLEQQN 754
            +C PGGI +VTVN+SLL PLN+++DP IQ+VR +EREQIK LNNKFASFIDKVRFLEQQN
Sbjct: 97   LCLPGGIHQVTVNKSLLAPLNVELDPEIQKVRAQEREQIKALNNKFASFIDKVRFLEQQN 156

Query: 755  KVLDTKWTLLQEQGTKTVRQNLEPLFEQYINNLRRQLDSILGERGRLDSELRNMQDLVED 934
            +VL TKW LLQ+      R+NLEP++E +I++L++QLDS+ G+R RLDSELR M+D VED
Sbjct: 157  QVLQTKWELLQQLDLSNCRRNLEPVYEAHISSLQKQLDSLSGDRVRLDSELRGMRDAVED 216

Query: 935  FKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEAKVDALMDEINFTKMFFEAELSQ 1114
             K +YE+EINKRTTAENEFV+LKKDVDAAYM+KVEL+AKVDAL  EI F K  +E E++Q
Sbjct: 217  CKKRYEEEINKRTTAENEFVVLKKDVDAAYMSKVELQAKVDALDGEIKFLKCLYEGEITQ 276

Query: 1115 MQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIANRSRTEAESWYQTKYEELQQTAG 1294
            MQ+H+SDTSVVLSMDNNRNLDLDSIIAEV+AQYEDIA +S+ EAE  YQTK++ELQ  AG
Sbjct: 277  MQSHISDTSVVLSMDNNRNLDLDSIIAEVRAQYEDIALKSKAEAEMVYQTKFQELQLAAG 336

Query: 1295 RHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQNAIADAEQRGELALKDARNKLA 1474
            RHGDDL++T++EISE+ R+IQRLR+EI++VKKQC+NL+ AIADAEQRG+ ALKDAR KL 
Sbjct: 337  RHGDDLKHTRNEISELTRLIQRLRSEIESVKKQCSNLETAIADAEQRGDCALKDARAKLD 396

Query: 1475 ELEDALQKAKQDMARLLREYQELMNTKLALDVEIATYRKLLEGEECKLSGEGVGPVNISV 1654
            ELE AL +AK+++AR+LRE+QELM+ KLALD+EIATYRKLLEGEEC++SGE    V+ISV
Sbjct: 397  ELERALHQAKEELARMLREHQELMSMKLALDIEIATYRKLLEGEECRMSGEHTSAVSISV 456

Query: 1655 VTNT 1666
            ++++
Sbjct: 457  ISSS 460


  Database: RefSeq49_MP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 15,617,559
  Number of sequences in database:  30,036
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 44,295,609
Number of extensions: 1114586
Number of successful extensions: 7635
Number of sequences better than 1.0e-05: 120
Number of HSP's gapped: 7188
Number of HSP's successfully gapped: 139
Length of query: 610
Length of database: 15,617,559
Length adjustment: 107
Effective length of query: 503
Effective length of database: 12,403,707
Effective search space: 6239064621
Effective search space used: 6239064621
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-007305
         (1830 letters)

Database: RefSeq49_SP.fasta 
           24,897 sequences; 11,343,932 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_003126221.1| PREDICTED: keratin, type II cytoskeletal 5 [...   769   0.0  
Alignment   gi|XP_003355441.1| PREDICTED: keratin, type II cytoskeletal 75-...   586   e-167
Alignment   gi|XP_003126216.2| PREDICTED: keratin, type II cytoskeletal 75-...   582   e-166
Alignment   gi|XP_001927240.2| PREDICTED: keratin, type II cytoskeletal 79 ...   543   e-155
Alignment   gi|XP_001929315.3| PREDICTED: keratin, type II cytoskeletal 71-...   527   e-150
Alignment   gi|XP_001927253.2| PREDICTED: LOW QUALITY PROTEIN: keratin, typ...   524   e-149
Alignment   gi|XP_003126223.2| PREDICTED: keratin, type II cytoskeletal 73 ...   503   e-142
Alignment   gi|NP_001230743.1| keratin 74 [Sus scrofa].                          502   e-142
Alignment   gi|XP_001927280.1| PREDICTED: keratin, type II cytoskeletal 3-l...   501   e-142
Alignment   gi|NP_001153087.1| keratin, type II cytoskeletal 8 [Sus scrofa].     488   e-138

>ref|XP_003126221.1| PREDICTED: keratin, type II cytoskeletal 5 [Sus scrofa].
          Length = 602

 Score =  769 bits (1985), Expect = 0.0
 Identities = 412/502 (82%), Positives = 413/502 (82%)
 Frame = +2

Query: 161  MSRQSSVSLRTGGSRSFSAASAITPXXXXXXXXXXXXXXXXXXXXXXXXXXXACGVGGYG 340
            MSRQSSVSLRTGGSRSFSAASAITP                           ACGVGGYG
Sbjct: 1    MSRQSSVSLRTGGSRSFSAASAITPSVSRTSFTTVSRSGGGGGGFGRVSLGGACGVGGYG 60

Query: 341  SRSLYNLGGSKRISIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 520
            SRSLYNLGGSKRISI                                             
Sbjct: 61   SRSLYNLGGSKRISISASGGGFRNRFGAGAGGGYGFGGGASSGFGFGGGAGGGFGLGGGA 120

Query: 521  XXXXXXXXXXXXXXXXXPVCPPGGIQEVTVNQSLLTPLNLQIDPTIQRVRTEEREQIKTL 700
                             PVCPPGGIQEVTVNQSLLTPLNLQIDPTIQRVRTEEREQIKTL
Sbjct: 121  GFGGGAGFGGGFGGPGFPVCPPGGIQEVTVNQSLLTPLNLQIDPTIQRVRTEEREQIKTL 180

Query: 701  NNKFASFIDKVRFLEQQNKVLDTKWTLLQEQGTKTVRQNLEPLFEQYINNLRRQLDSILG 880
            NNKFASFIDKVRFLEQQNKVLDTKWTLLQEQGTKTVRQNLEPLFEQYINNLRRQLDSILG
Sbjct: 181  NNKFASFIDKVRFLEQQNKVLDTKWTLLQEQGTKTVRQNLEPLFEQYINNLRRQLDSILG 240

Query: 881  ERGRLDSELRNMQDLVEDFKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEAKVDA 1060
            ERGRLDSELRNMQDLVEDFKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEAKVDA
Sbjct: 241  ERGRLDSELRNMQDLVEDFKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEAKVDA 300

Query: 1061 LMDEINFTKMFFEAELSQMQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIANRSRT 1240
            LMDEINFTKMFFEAELSQMQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIANRSRT
Sbjct: 301  LMDEINFTKMFFEAELSQMQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIANRSRT 360

Query: 1241 EAESWYQTKYEELQQTAGRHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQNAIA 1420
            EAESWYQTKYEELQQTAGRHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQNAIA
Sbjct: 361  EAESWYQTKYEELQQTAGRHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQNAIA 420

Query: 1421 DAEQRGELALKDARNKLAELEDALQKAKQDMARLLREYQELMNTKLALDVEIATYRKLLE 1600
            DAEQRGELALKDARNKLAELEDALQKAKQDMARLLREYQELMNTKLALDVEIATYRKLLE
Sbjct: 421  DAEQRGELALKDARNKLAELEDALQKAKQDMARLLREYQELMNTKLALDVEIATYRKLLE 480

Query: 1601 GEECKLSGEGVGPVNISVVTNT 1666
            GEEC+LSGEGVGPVNISVVTNT
Sbjct: 481  GEECRLSGEGVGPVNISVVTNT 502


>ref|XP_003355441.1| PREDICTED: keratin, type II cytoskeletal 75-like [Sus scrofa].
          Length = 526

 Score =  586 bits (1511), Expect = e-167
 Identities = 294/360 (81%), Positives = 338/360 (93%)
 Frame = +2

Query: 587  GGIQEVTVNQSLLTPLNLQIDPTIQRVRTEEREQIKTLNNKFASFIDKVRFLEQQNKVLD 766
            GGIQEVTVNQSLLTPL+L+IDP++QRVR EEREQIKTLNNKFASFIDKVRFLEQQNKVL+
Sbjct: 113  GGIQEVTVNQSLLTPLHLEIDPSLQRVRKEEREQIKTLNNKFASFIDKVRFLEQQNKVLE 172

Query: 767  TKWTLLQEQGTKTVRQNLEPLFEQYINNLRRQLDSILGERGRLDSELRNMQDLVEDFKNK 946
            TKW+LLQE   KT R N+EP+FE YI+NLRRQLDS+ GER RL+ EL++MQD+VEDFKNK
Sbjct: 173  TKWSLLQEH--KTTRANIEPMFEAYISNLRRQLDSLGGERSRLEVELKSMQDVVEDFKNK 230

Query: 947  YEDEINKRTTAENEFVMLKKDVDAAYMNKVELEAKVDALMDEINFTKMFFEAELSQMQTH 1126
            YE+EIN+RT AENEFV+LKKDVDAAYM+KVELEAKV+ALMDEINF + F++AEL+Q+Q  
Sbjct: 231  YEEEINRRTVAENEFVVLKKDVDAAYMSKVELEAKVEALMDEINFLRAFYDAELAQLQAQ 290

Query: 1127 VSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIANRSRTEAESWYQTKYEELQQTAGRHGD 1306
            +S+TSV+LSMDNNR LDLDSII+EVKAQYEDIANRSR EAESWYQ KYEELQ++AGRHGD
Sbjct: 291  ISETSVILSMDNNRKLDLDSIISEVKAQYEDIANRSRAEAESWYQIKYEELQRSAGRHGD 350

Query: 1307 DLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQNAIADAEQRGELALKDARNKLAELED 1486
            DLR+TK EISE+NR+IQRLR+EIDN+KKQCA LQ+AIADAEQRGELALKDA++KLAELED
Sbjct: 351  DLRSTKMEISELNRVIQRLRSEIDNLKKQCATLQSAIADAEQRGELALKDAKHKLAELED 410

Query: 1487 ALQKAKQDMARLLREYQELMNTKLALDVEIATYRKLLEGEECKLSGEGVGPVNISVVTNT 1666
            ALQKAKQDMAR LREYQELMN KLALD+EIATYRKLLEGEEC+L+GEGVGPVNISVV+++
Sbjct: 411  ALQKAKQDMARQLREYQELMNVKLALDIEIATYRKLLEGEECRLTGEGVGPVNISVVSSS 470


>ref|XP_003126216.2| PREDICTED: keratin, type II cytoskeletal 75-like [Sus scrofa].
          Length = 587

 Score =  582 bits (1501), Expect = e-166
 Identities = 302/358 (84%), Positives = 323/358 (90%)
 Frame = +2

Query: 575  VCPPGGIQEVTVNQSLLTPLNLQIDPTIQRVRTEEREQIKTLNNKFASFIDKVRFLEQQN 754
            VCPPGGIQEVTVNQSLLTPLNLQIDPTIQRVR EEREQIKTLNNKFASFIDKVRFLEQQN
Sbjct: 115  VCPPGGIQEVTVNQSLLTPLNLQIDPTIQRVRKEEREQIKTLNNKFASFIDKVRFLEQQN 174

Query: 755  KVLDTKWTLLQEQGTKTVRQNLEPLFEQYINNLRRQLDSILGERGRLDSELRNMQDLVED 934
            KVL+TKW+LLQEQGT+TVRQNLEPLF+ Y+N+LRRQLD     +  +   L +   L+  
Sbjct: 175  KVLETKWSLLQEQGTRTVRQNLEPLFDAYVNDLRRQLDXXQPGKSSIKPLLNSPPPLLCA 234

Query: 935  FKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEAKVDALMDEINFTKMFFEAELSQ 1114
            ++  YEDEINKRT AENEFV LKKDVDAAYMNK+ELEAKV++L DEINF +M FEAELSQ
Sbjct: 235  YR--YEDEINKRTAAENEFVALKKDVDAAYMNKMELEAKVNSLTDEINFLRMLFEAELSQ 292

Query: 1115 MQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIANRSRTEAESWYQTKYEELQQTAG 1294
            MQTHVSDTSVVLSMDNNR+LDLDSIIAEVKAQYEDIANRSR EAESWYQTKYEELQ TAG
Sbjct: 293  MQTHVSDTSVVLSMDNNRSLDLDSIIAEVKAQYEDIANRSRAEAESWYQTKYEELQVTAG 352

Query: 1295 RHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQNAIADAEQRGELALKDARNKLA 1474
            RHGDDLRNTK EISE NRMIQRLRAEID+VKKQCA+LQ AIADAEQRGELALKDAR KL 
Sbjct: 353  RHGDDLRNTKQEISETNRMIQRLRAEIDSVKKQCASLQTAIADAEQRGELALKDARAKLV 412

Query: 1475 ELEDALQKAKQDMARLLREYQELMNTKLALDVEIATYRKLLEGEECKLSGEGVGPVNI 1648
            +LEDALQKAKQDMARLL EYQELMN KLALDVEIATYRKLLEGEEC+LSGEGV PVNI
Sbjct: 413  DLEDALQKAKQDMARLLHEYQELMNIKLALDVEIATYRKLLEGEECRLSGEGVSPVNI 470


>ref|XP_001927240.2| PREDICTED: keratin, type II cytoskeletal 79 [Sus scrofa].
          Length = 535

 Score =  543 bits (1400), Expect = e-155
 Identities = 273/365 (74%), Positives = 319/365 (87%), Gaps = 2/365 (0%)
 Frame = +2

Query: 578  CPPGGIQEVTVNQSLLTPLNLQIDPTIQRVRTEEREQIKTLNNKFASFIDKVRFLEQQNK 757
            CPPGGIQ+VTVNQSLLTPLN++IDP I++VRT+EREQIKTLN+KFASFIDKVRFLEQQNK
Sbjct: 109  CPPGGIQQVTVNQSLLTPLNVEIDPEIRQVRTQEREQIKTLNDKFASFIDKVRFLEQQNK 168

Query: 758  VLDTKWTLLQEQGTKT--VRQNLEPLFEQYINNLRRQLDSILGERGRLDSELRNMQDLVE 931
            VL+TKW LLQEQG K+   R+NLEPLFE YI+NLR QLDS+  ERGRLDSELRNMQDLVE
Sbjct: 169  VLETKWVLLQEQGQKSGVTRKNLEPLFENYISNLRMQLDSLQSERGRLDSELRNMQDLVE 228

Query: 932  DFKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEAKVDALMDEINFTKMFFEAELS 1111
            DFKNKYEDEINKR  AENEFV+LKKDVDAA+M +++L  KVD L DEINF +  +E ELS
Sbjct: 229  DFKNKYEDEINKRNAAENEFVVLKKDVDAAFMGRMDLHGKVDGLTDEINFLRHLYEEELS 288

Query: 1112 QMQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIANRSRTEAESWYQTKYEELQQTA 1291
            QMQTHVSDT+V+LSMDNNRNLDLDSIIAEVKAQYE IA RSR EAE+WYQ+KYEELQ TA
Sbjct: 289  QMQTHVSDTNVILSMDNNRNLDLDSIIAEVKAQYEQIAQRSRAEAEAWYQSKYEELQVTA 348

Query: 1292 GRHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQNAIADAEQRGELALKDARNKL 1471
            G+HGD+LR+TK+EISE+ R +QRL+ E+D  KKQC +LQ+AI +AEQRG+LALKDA+ KL
Sbjct: 349  GKHGDNLRDTKNEISELTRTVQRLQGEVDAAKKQCQHLQSAIEEAEQRGDLALKDAQKKL 408

Query: 1472 AELEDALQKAKQDMARLLREYQELMNTKLALDVEIATYRKLLEGEECKLSGEGVGPVNIS 1651
             +L+ AL +AK+D+ARLLR+YQ LMN KLALDVEIATYRKLLE EE ++SGE    V+IS
Sbjct: 409  GDLDMALHQAKEDLARLLRDYQALMNVKLALDVEIATYRKLLESEESRMSGECPSAVSIS 468

Query: 1652 VVTNT 1666
            V  N+
Sbjct: 469  VTGNS 473


>ref|XP_001929315.3| PREDICTED: keratin, type II cytoskeletal 71-like [Sus scrofa].
          Length = 519

 Score =  527 bits (1358), Expect = e-150
 Identities = 265/363 (73%), Positives = 318/363 (87%), Gaps = 2/363 (0%)
 Frame = +2

Query: 584  PGGIQEVTVNQSLLTPLNLQIDPTIQRVRTEEREQIKTLNNKFASFIDKVRFLEQQNKVL 763
            PGGIQEVTVNQSLL PLN++IDP I +V+ +EREQIKTLNNKFASFIDKVRFLEQQNKVL
Sbjct: 93   PGGIQEVTVNQSLLQPLNVEIDPQIGQVKAQEREQIKTLNNKFASFIDKVRFLEQQNKVL 152

Query: 764  DTKWTLLQEQGTKTVR--QNLEPLFEQYINNLRRQLDSILGERGRLDSELRNMQDLVEDF 937
            +TKW LLQ+QGT ++    NLEPLFE YIN+ R  LDSILGE+GRLDSELRNMQDLVEDF
Sbjct: 153  ETKWNLLQQQGTNSITGTNNLEPLFENYINSQRSYLDSILGEKGRLDSELRNMQDLVEDF 212

Query: 938  KNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEAKVDALMDEINFTKMFFEAELSQM 1117
            K KYEDEINKRT AENEFV LKKDVDAAY NKVEL+AKVD++  EI F K  +EAE++Q+
Sbjct: 213  KKKYEDEINKRTAAENEFVTLKKDVDAAYANKVELQAKVDSMDQEIKFFKCLYEAEIAQI 272

Query: 1118 QTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIANRSRTEAESWYQTKYEELQQTAGR 1297
            Q+H+SD SV+LSMDNNR+L+LDSII EV+AQYE+IA +S+ EAE+ YQTK++ELQ  AGR
Sbjct: 273  QSHISDMSVILSMDNNRDLNLDSIIDEVRAQYEEIALKSKAEAEALYQTKFQELQLAAGR 332

Query: 1298 HGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQNAIADAEQRGELALKDARNKLAE 1477
            HGDDL+NTK+EISE+ R+IQR+R+EI+NVKKQ +NL+ AIADAEQRG+ ALKDAR KL E
Sbjct: 333  HGDDLKNTKNEISELTRLIQRIRSEIENVKKQASNLETAIADAEQRGDNALKDARAKLDE 392

Query: 1478 LEDALQKAKQDMARLLREYQELMNTKLALDVEIATYRKLLEGEECKLSGEGVGPVNISVV 1657
            LE AL +AK+++AR+LREYQELM+ KLALD+EIATYRKLLE EEC++SGE   PV+IS++
Sbjct: 393  LEGALHQAKEELARMLREYQELMSLKLALDMEIATYRKLLESEECRMSGEFPSPVSISII 452

Query: 1658 TNT 1666
            + T
Sbjct: 453  STT 455


>ref|XP_001927253.2| PREDICTED: LOW QUALITY PROTEIN: keratin, type II cytoskeletal 4 [Sus
            scrofa].
          Length = 611

 Score =  524 bits (1350), Expect = e-149
 Identities = 263/361 (72%), Positives = 315/361 (87%)
 Frame = +2

Query: 575  VCPPGGIQEVTVNQSLLTPLNLQIDPTIQRVRTEEREQIKTLNNKFASFIDKVRFLEQQN 754
            VCP GGIQ+VT+NQSLLTPL+++IDP IQ+VRT+EREQIK LN+KFASFIDKVRFLEQQN
Sbjct: 188  VCPAGGIQQVTINQSLLTPLHVEIDPEIQKVRTQEREQIKILNDKFASFIDKVRFLEQQN 247

Query: 755  KVLDTKWTLLQEQGTKTVRQNLEPLFEQYINNLRRQLDSILGERGRLDSELRNMQDLVED 934
            KVL+TKW LLQ+Q T T  +NL+P FE YI+ LR+QLD++  ++G L SEL+ MQD VED
Sbjct: 248  KVLETKWNLLQQQKTTTSSKNLDPFFEAYISALRKQLDTLTNDKGYLQSELKIMQDSVED 307

Query: 935  FKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEAKVDALMDEINFTKMFFEAELSQ 1114
            FK KYE+EINKRT AEN+FV+LKKDVDAAYMNKVELEAKVD L DEINF ++ + AELSQ
Sbjct: 308  FKAKYEEEINKRTAAENDFVVLKKDVDAAYMNKVELEAKVDGLNDEINFLRILYAAELSQ 367

Query: 1115 MQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIANRSRTEAESWYQTKYEELQQTAG 1294
            MQTHVSDTSVVLSMDNNR+LDLDSIIAEV+AQYE+I  RS+ EAE+ YQ K ++LQ +  
Sbjct: 368  MQTHVSDTSVVLSMDNNRDLDLDSIIAEVRAQYEEITQRSKAEAEALYQIKIQQLQISVD 427

Query: 1295 RHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQNAIADAEQRGELALKDARNKLA 1474
            +HGD L+NTK+EISE+NRMIQRLRAEI+N+KKQC  LQ ++ADAEQRGE ALKDA +K A
Sbjct: 428  QHGDSLKNTKNEISELNRMIQRLRAEIENIKKQCQTLQGSVADAEQRGEAALKDAYSKRA 487

Query: 1475 ELEDALQKAKQDMARLLREYQELMNTKLALDVEIATYRKLLEGEECKLSGEGVGPVNISV 1654
            ELE AL+KAK+++AR+LREYQELM+ KLALD+EIATYRKLLEGEEC++SGE    V+ISV
Sbjct: 488  ELEAALKKAKEELARMLREYQELMSVKLALDIEIATYRKLLEGEECRMSGECQSAVSISV 547

Query: 1655 V 1657
            V
Sbjct: 548  V 548


>ref|XP_003126223.2| PREDICTED: keratin, type II cytoskeletal 73 [Sus scrofa].
          Length = 518

 Score =  503 bits (1295), Expect = e-142
 Identities = 247/364 (67%), Positives = 313/364 (85%)
 Frame = +2

Query: 575  VCPPGGIQEVTVNQSLLTPLNLQIDPTIQRVRTEEREQIKTLNNKFASFIDKVRFLEQQN 754
            VCPPGGI +VTVN+SLL PLN+++DP IQ+VR +EREQIK LNNKFASFIDKVRFLEQQN
Sbjct: 98   VCPPGGIHQVTVNESLLAPLNVELDPEIQKVRAQEREQIKALNNKFASFIDKVRFLEQQN 157

Query: 755  KVLDTKWTLLQEQGTKTVRQNLEPLFEQYINNLRRQLDSILGERGRLDSELRNMQDLVED 934
            +VL+TKW LLQ+      + NLEP+ E YI+ LR+QL+++ G+R RLDSELR+++D+VED
Sbjct: 158  QVLETKWELLQQLDLNNCKNNLEPILEGYISTLRKQLEALSGDRVRLDSELRSVRDVVED 217

Query: 935  FKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEAKVDALMDEINFTKMFFEAELSQ 1114
            +K +YE EIN+RT AENEFV LKKDVD AYMNKVEL+AKVD+L DEI F K  +E E++Q
Sbjct: 218  YKKRYEVEINRRTAAENEFVELKKDVDTAYMNKVELQAKVDSLTDEIKFFKYLYEGEIAQ 277

Query: 1115 MQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIANRSRTEAESWYQTKYEELQQTAG 1294
            +Q+H+SDTSV+LSMDNNR+LDLDSIIAEV+AQYEDI+ +S+ EAE+ YQ+K +ELQ TAG
Sbjct: 278  IQSHISDTSVILSMDNNRDLDLDSIIAEVRAQYEDISLKSKAEAEALYQSKIQELQVTAG 337

Query: 1295 RHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQNAIADAEQRGELALKDARNKLA 1474
            +HGDDL+ TK EIS++NR+IQR+ AEI +VKKQC+NL+ AI DAEQRG+  LKDA+ KL 
Sbjct: 338  QHGDDLKLTKAEISDLNRLIQRICAEIGSVKKQCSNLETAITDAEQRGDCTLKDAQAKLD 397

Query: 1475 ELEDALQKAKQDMARLLREYQELMNTKLALDVEIATYRKLLEGEECKLSGEGVGPVNISV 1654
            ELE AL +AK+++AR+LREYQELM+TKLALDVEIATYRKLLEGEEC++ G+    ++ISV
Sbjct: 398  ELEGALYQAKEELARMLREYQELMSTKLALDVEIATYRKLLEGEECRMYGDYPNSMSISV 457

Query: 1655 VTNT 1666
            ++NT
Sbjct: 458  ISNT 461


>ref|NP_001230743.1| keratin 74 [Sus scrofa].
          Length = 531

 Score =  502 bits (1292), Expect = e-142
 Identities = 247/364 (67%), Positives = 315/364 (86%)
 Frame = +2

Query: 575  VCPPGGIQEVTVNQSLLTPLNLQIDPTIQRVRTEEREQIKTLNNKFASFIDKVRFLEQQN 754
            +CPPGGI +VTVN+SLL PLN+++DP IQ+VRT+EREQIK LNNKFASFIDKVRFLEQQN
Sbjct: 106  MCPPGGIHQVTVNKSLLAPLNVELDPEIQKVRTQEREQIKALNNKFASFIDKVRFLEQQN 165

Query: 755  KVLDTKWTLLQEQGTKTVRQNLEPLFEQYINNLRRQLDSILGERGRLDSELRNMQDLVED 934
            +VL+TKW LLQ+      ++NLEP+ E YI+ L++QL+++ G+R RLDSEL+ MQDLVED
Sbjct: 166  QVLETKWQLLQQLDLDNCKKNLEPILEGYISTLQKQLEALSGDRMRLDSELKIMQDLVED 225

Query: 935  FKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEAKVDALMDEINFTKMFFEAELSQ 1114
            +K +YE EIN+RT AENEFV+LKKD DAAY  KVEL+AKVD+L  +I F K  ++AE++Q
Sbjct: 226  YKKRYEVEINRRTAAENEFVVLKKDADAAYTVKVELQAKVDSLDKDIKFLKCLYDAEIAQ 285

Query: 1115 MQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIANRSRTEAESWYQTKYEELQQTAG 1294
            +QTH S+TSV+LSMDNNR+LDLDSIIAEV+AQYEDIA +S+ EAE+ YQ+K +ELQ  AG
Sbjct: 286  VQTHASETSVILSMDNNRDLDLDSIIAEVRAQYEDIALKSKAEAEALYQSKIQELQLAAG 345

Query: 1295 RHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQNAIADAEQRGELALKDARNKLA 1474
            +HGDDL++T+++ISE+NR+IQR+R EI NVKKQC+NL+ AIADAEQRGE ALKDAR KL 
Sbjct: 346  QHGDDLKHTRNDISELNRLIQRIRCEIANVKKQCSNLETAIADAEQRGENALKDARAKLD 405

Query: 1475 ELEDALQKAKQDMARLLREYQELMNTKLALDVEIATYRKLLEGEECKLSGEGVGPVNISV 1654
            ELE AL +AK+++AR+LREYQELM+ KLALD+EIATYRKLLEGEEC++SGE    V+ISV
Sbjct: 406  ELEGALHQAKEELARMLREYQELMSLKLALDMEIATYRKLLEGEECRMSGENPSSVSISV 465

Query: 1655 VTNT 1666
            ++++
Sbjct: 466  ISSS 469


>ref|XP_001927280.1| PREDICTED: keratin, type II cytoskeletal 3-like [Sus scrofa].
          Length = 655

 Score =  501 bits (1290), Expect = e-142
 Identities = 256/363 (70%), Positives = 311/363 (85%), Gaps = 2/363 (0%)
 Frame = +2

Query: 584  PGGIQEVTVNQSLLTPLNLQIDPTIQRVRTEEREQIKTLNNKFASFIDKVRFLEQQNKVL 763
            PGGIQEVTVNQSLL PLN++IDP I +V+ +EREQIKTLN+KFASFIDKVRFLEQQNKVL
Sbjct: 167  PGGIQEVTVNQSLLQPLNVEIDPQIGQVKAQEREQIKTLNDKFASFIDKVRFLEQQNKVL 226

Query: 764  DTKWTLLQEQGT--KTVRQNLEPLFEQYINNLRRQLDSILGERGRLDSELRNMQDLVEDF 937
            +TKW+LLQEQG+   T  +NLE  FE YI++L+  LD +  E+ +L  ELR+M+++VEDF
Sbjct: 227  ETKWSLLQEQGSGSNTNNRNLESFFENYISSLKAFLDGLHIEKDKLQEELRSMEEMVEDF 286

Query: 938  KNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEAKVDALMDEINFTKMFFEAELSQM 1117
            K KYE+EINKRT AEN+FV+LKKD+DAAYM KVELEAKVD++ DEINF K  ++AELSQ+
Sbjct: 287  KKKYEEEINKRTAAENDFVVLKKDIDAAYMTKVELEAKVDSVTDEINFLKALYDAELSQL 346

Query: 1118 QTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIANRSRTEAESWYQTKYEELQQTAGR 1297
            Q+  SDTSVVLSMDNNR+LDLDSIIAEV+AQYE IA RS+ EAE+ YQTK  EL+ TAGR
Sbjct: 347  QSDTSDTSVVLSMDNNRDLDLDSIIAEVRAQYEAIAQRSKAEAEALYQTKLGELETTAGR 406

Query: 1298 HGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQNAIADAEQRGELALKDARNKLAE 1477
            HGDDL++T+ EISE+NR+IQRL+AEI+++KKQ  NLQ A+ADAEQRGE+ALKDA  KL E
Sbjct: 407  HGDDLKSTRSEISELNRLIQRLQAEIESIKKQNTNLQTAVADAEQRGEVALKDADTKLQE 466

Query: 1478 LEDALQKAKQDMARLLREYQELMNTKLALDVEIATYRKLLEGEECKLSGEGVGPVNISVV 1657
            L+ ALQ+AK+D+ARLL+EYQELMN KLALDVEIATYR LLEGEEC++SGE    V+I +V
Sbjct: 467  LKVALQQAKEDLARLLKEYQELMNVKLALDVEIATYRTLLEGEECRMSGECQSAVSIEMV 526

Query: 1658 TNT 1666
             NT
Sbjct: 527  HNT 529


>ref|NP_001153087.1| keratin, type II cytoskeletal 8 [Sus scrofa].
          Length = 489

 Score =  488 bits (1256), Expect = e-138
 Identities = 255/360 (70%), Positives = 300/360 (83%)
 Frame = +2

Query: 587  GGIQEVTVNQSLLTPLNLQIDPTIQRVRTEEREQIKTLNNKFASFIDKVRFLEQQNKVLD 766
            GGI  VTVNQSLL+PL L++DP IQ VRT+E+EQIKTLNNKFASFIDKVR LEQQNKVL+
Sbjct: 69   GGITAVTVNQSLLSPLKLEVDPNIQAVRTQEKEQIKTLNNKFASFIDKVRHLEQQNKVLE 128

Query: 767  TKWTLLQEQGTKTVRQNLEPLFEQYINNLRRQLDSILGERGRLDSELRNMQDLVEDFKNK 946
            TKW LLQ+Q  KT R N++ +FE YINNLRRQL+++  E+ +L+ EL NMQ LVEDFKNK
Sbjct: 129  TKWNLLQQQ--KTARSNIDNMFESYINNLRRQLETLAQEKLKLEVELGNMQGLVEDFKNK 186

Query: 947  YEDEINKRTTAENEFVMLKKDVDAAYMNKVELEAKVDALMDEINFTKMFFEAELSQMQTH 1126
            YE+EI KRT  ENEFV++KKDVD AYMNKVELE++++ L DEINF +  +E E+ +MQ+ 
Sbjct: 187  YEEEIQKRTDMENEFVIIKKDVDEAYMNKVELESRLEGLTDEINFYRQLYEEEIREMQSQ 246

Query: 1127 VSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIANRSRTEAESWYQTKYEELQQTAGRHGD 1306
            +SDTSVVLSMDN+R+LDLD IIAEVKAQYE+IANRSR EAE+ YQ KYEELQ  AG+HGD
Sbjct: 247  ISDTSVVLSMDNSRSLDLDGIIAEVKAQYEEIANRSRAEAETMYQIKYEELQSLAGKHGD 306

Query: 1307 DLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQNAIADAEQRGELALKDARNKLAELED 1486
            DLR TK EISEMNR I RL+AEI+ +K Q A+L+ AIADAEQRGELA+KDA+ KLAELE 
Sbjct: 307  DLRRTKTEISEMNRNISRLQAEIEGLKGQRASLEAAIADAEQRGELAVKDAQAKLAELEA 366

Query: 1487 ALQKAKQDMARLLREYQELMNTKLALDVEIATYRKLLEGEECKLSGEGVGPVNISVVTNT 1666
            AL+ AKQDMAR LREYQELMN KLALDVEIATYRKLLEGEE +L     G  N+S+ T T
Sbjct: 367  ALRTAKQDMARQLREYQELMNVKLALDVEIATYRKLLEGEESRLES---GMQNMSIHTKT 423


  Database: RefSeq49_SP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 11,343,932
  Number of sequences in database:  24,897
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 33,209,751
Number of extensions: 869684
Number of successful extensions: 6197
Number of sequences better than 1.0e-05: 86
Number of HSP's gapped: 5843
Number of HSP's successfully gapped: 102
Length of query: 610
Length of database: 11,343,932
Length adjustment: 105
Effective length of query: 505
Effective length of database: 8,729,747
Effective search space: 4408522235
Effective search space used: 4408522235
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-007305
         (1830 letters)

Database: Sscrofa_10.2.fasta 
           4582 sequences; 2,808,509,378 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Sscrofa_Chr05                                                         959   0.0  
gb|GL896034.1| Sus scrofa unplaced genomic scaffold chrU_scaffol...   115   9e-23
Sscrofa_Chr12                                                         100   5e-18
Sscrofa_Chr15                                                          84   3e-13
Sscrofa_Chr04                                                          74   3e-10
Sscrofa_Chr10                                                          66   7e-08

>Sscrofa_Chr05 
||          Length = 111506441

 Score =  959 bits (484), Expect = 0.0
 Identities = 487/488 (99%)
 Strand = Plus / Plus

                                                                            
Query: 3        acaaactctcccgcccagcccaggtctagaggataaaaggggggcttgtggcttctgggt 62
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18365764 acaaactctcccgcccagcccaggtctagaggataaaaggggggcttgtggcttctgggt 18365823

                                                                            
Query: 63       gggagagccgccttctgcgcgtcccgccaagctctttttcttcagcacctccagaccact 122
                || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18365824 ggcagagccgccttctgcgcgtcccgccaagctctttttcttcagcacctccagaccact 18365883

                                                                            
Query: 123      agcgcctggtactcttgctccaccaggaacaagccatcatgtctcgccaatcgagtgtgt 182
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18365884 agcgcctggtactcttgctccaccaggaacaagccatcatgtctcgccaatcgagtgtgt 18365943

                                                                            
Query: 183      ccttacgcaccgggggcagccgtagcttcagcgccgcctctgccatcaccccgtctgtct 242
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18365944 ccttacgcaccgggggcagccgtagcttcagcgccgcctctgccatcaccccgtctgtct 18366003

                                                                            
Query: 243      ctcgcaccagtttcaccactgtgtctcggtctgggggtggcggtggcggctttggcaggg 302
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18366004 ctcgcaccagtttcaccactgtgtctcggtctgggggtggcggtggcggctttggcaggg 18366063

                                                                            
Query: 303      tcagccttgggggtgcttgtggagttggaggctatggcagccggagcctctacaacctgg 362
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18366064 tcagccttgggggtgcttgtggagttggaggctatggcagccggagcctctacaacctgg 18366123

                                                                            
Query: 363      ggggttccaagaggatctccatcagcgctagcggtggtggcttcaggaaccgatttggtg 422
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18366124 ggggttccaagaggatctccatcagcgctagcggtggtggcttcaggaaccgatttggtg 18366183

                                                                            
Query: 423      ccggtgctggaggcggctatggttttggaggtggagccagcagcggatttggttttggcg 482
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18366184 ccggtgctggaggcggctatggttttggaggtggagccagcagcggatttggttttggcg 18366243

                        
Query: 483      gtggagca 490
                ||||||||
Sbjct: 18366244 gtggagca 18366251



 Score =  440 bits (222), Expect = e-120
 Identities = 222/222 (100%)
 Strand = Plus / Plus

                                                                            
Query: 1392     agtgcgccaacctgcagaatgccattgctgatgctgagcagcgtggggagctggccctca 1451
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18369973 agtgcgccaacctgcagaatgccattgctgatgctgagcagcgtggggagctggccctca 18370032

                                                                            
Query: 1452     aggacgccaggaacaagctggccgagctggaggatgccctgcagaaggccaagcaggaca 1511
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18370033 aggacgccaggaacaagctggccgagctggaggatgccctgcagaaggccaagcaggaca 18370092

                                                                            
Query: 1512     tggcccggctgctgagggagtaccaggagctcatgaacaccaagctggccctggacgtgg 1571
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18370093 tggcccggctgctgagggagtaccaggagctcatgaacaccaagctggccctggacgtgg 18370152

                                                          
Query: 1572     agatcgccacctacaggaagctgctggagggcgaggagtgca 1613
                ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18370153 agatcgccacctacaggaagctgctggagggcgaggagtgca 18370194



 Score =  426 bits (215), Expect = e-116
 Identities = 218/219 (99%)
 Strand = Plus / Plus

                                                                            
Query: 729      aggtgcggttcctggagcagcagaacaaggtcctggacaccaagtggaccctgctgcagg 788
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18367061 aggtgcggttcctggagcagcagaacaaggtcctggacaccaagtggaccctgctgcagg 18367120

                                                                            
Query: 789      agcagggcaccaagactgtcaggcagaacctggagcctttgttcgagcagtacatcaaca 848
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18367121 agcagggcaccaagactgtcaggcagaacctggagcctttgttcgagcagtacatcaaca 18367180

                                                                            
Query: 849      acctcaggagacagctggacagcatcctgggggagagaggccgcctggactcagagctga 908
                ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 18367181 acctcaggagacagctggacagcatcctgggagagagaggccgcctggactcagagctga 18367240

                                                       
Query: 909      ggaacatgcaggacctggtggaggacttcaagaacaagt 947
                |||||||||||||||||||||||||||||||||||||||
Sbjct: 18367241 ggaacatgcaggacctggtggaggacttcaagaacaagt 18367279



 Score =  387 bits (195), Expect = e-104
 Identities = 207/211 (98%)
 Strand = Plus / Plus

                                                                            
Query: 737      ttcctggagcagcagaacaaggtcctggacaccaagtggaccctgctgcaggagcagggc 796
                ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 18202061 ttcctggagcagcagaacaaggtgctggacaccaagtggaccctgctgcaggagcagggc 18202120

                                                                            
Query: 797      accaagactgtcaggcagaacctggagcctttgttcgagcagtacatcaacaacctcagg 856
                | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 18202121 atcaagactgtcaggcagaacctggagcctttgttcgagcagtacatcaacaaccttagg 18202180

                                                                            
Query: 857      agacagctggacagcatcctgggggagagaggccgcctggactcagagctgaggaacatg 916
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 18202181 agacagctggacagcatcctgggggagagaggccgcctggactcagagctgaggagcatg 18202240

                                               
Query: 917      caggacctggtggaggacttcaagaacaagt 947
                |||||||||||||||||||||||||||||||
Sbjct: 18202241 caggacctggtggaggacttcaagaacaagt 18202271



 Score =  353 bits (178), Expect = 2e-94
 Identities = 211/222 (95%)
 Strand = Plus / Plus

                                                                            
Query: 1392     agtgcgccaacctgcagaatgccattgctgatgctgagcagcgtggggagctggccctca 1451
                ||||||||| |||||||  |||||| |||||||| ||||||||||||||| |||||||||
Sbjct: 18204570 agtgcgccagcctgcagtctgccatcgctgatgccgagcagcgtggggagatggccctca 18204629

                                                                            
Query: 1452     aggacgccaggaacaagctggccgagctggaggatgccctgcagaaggccaagcaggaca 1511
                |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18204630 aggatgccaggaacaagctggccgagctggaggatgccctgcagaaggccaagcaggaca 18204689

                                                                            
Query: 1512     tggcccggctgctgagggagtaccaggagctcatgaacaccaagctggccctggacgtgg 1571
                ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18204690 tggccaggctgctgaaggagtaccaggagctcatgaacaccaagctggccctggacgtgg 18204749

                                                          
Query: 1572     agatcgccacctacaggaagctgctggagggcgaggagtgca 1613
                |||| ||||||||||||||||||||||| |||||||||||||
Sbjct: 18204750 agattgccacctacaggaagctgctggaaggcgaggagtgca 18204791



 Score =  353 bits (178), Expect = 2e-94
 Identities = 178/178 (100%)
 Strand = Plus / Plus

                                                                            
Query: 556      cggtggccctggcttccccgtctgcccccctggaggcattcaagaggtcaccgtcaacca 615
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18366317 cggtggccctggcttccccgtctgcccccctggaggcattcaagaggtcaccgtcaacca 18366376

                                                                            
Query: 616      gagtctcctgactccccttaacctgcaaatcgaccccaccatccagcgggtgaggaccga 675
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18366377 gagtctcctgactccccttaacctgcaaatcgaccccaccatccagcgggtgaggaccga 18366436

                                                                          
Query: 676      ggagcgggagcagatcaagaccctcaacaacaagttcgcctccttcatcgacaaggtg 733
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18366437 ggagcgggagcagatcaagaccctcaacaacaagttcgcctccttcatcgacaaggtg 18366494



 Score =  329 bits (166), Expect = 3e-87
 Identities = 208/222 (93%)
 Strand = Plus / Plus

                                                                            
Query: 1392     agtgcgccaacctgcagaatgccattgctgatgctgagcagcgtggggagctggccctca 1451
                ||||||||| |||||||  |||||| |||||||| ||||||||||||||| |||||||||
Sbjct: 18186836 agtgcgccagcctgcagtctgccatcgctgatgccgagcagcgtggggagatggccctca 18186895

                                                                            
Query: 1452     aggacgccaggaacaagctggccgagctggaggatgccctgcagaaggccaagcaggaca 1511
                |||| |||||||||||||||||||||||||||||||||||||  ||||||||||||||||
Sbjct: 18186896 aggatgccaggaacaagctggccgagctggaggatgccctgcttaaggccaagcaggaca 18186955

                                                                            
Query: 1512     tggcccggctgctgagggagtaccaggagctcatgaacaccaagctggccctggacgtgg 1571
                ||||| ||||||||| |||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 18186956 tggccaggctgctgaaggagtaccaggagctcatgaacgccaagctggccctggacgtgg 18187015

                                                          
Query: 1572     agatcgccacctacaggaagctgctggagggcgaggagtgca 1613
                |||| ||||||||||||||||||||||| |||||||||||||
Sbjct: 18187016 agattgccacctacaggaagctgctggaaggcgaggagtgca 18187057



 Score =  329 bits (166), Expect = 3e-87
 Identities = 166/166 (100%)
 Strand = Plus / Plus

                                                                            
Query: 1102     ggagctgtcccagatgcagacacatgtctcagacacatctgtggtcctctctatggacaa 1161
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18369121 ggagctgtcccagatgcagacacatgtctcagacacatctgtggtcctctctatggacaa 18369180

                                                                            
Query: 1162     caaccgcaacctggacctggacagcatcatcgccgaggtcaaggcccagtacgaggacat 1221
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18369181 caaccgcaacctggacctggacagcatcatcgccgaggtcaaggcccagtacgaggacat 18369240

                                                              
Query: 1222     cgccaaccgcagccgcacggaagccgagtcctggtaccagaccaag 1267
                ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18369241 cgccaaccgcagccgcacggaagccgagtcctggtaccagaccaag 18369286



 Score =  268 bits (135), Expect = 1e-68
 Identities = 186/203 (91%)
 Strand = Plus / Plus

                                                                            
Query: 1411     tgccattgctgatgctgagcagcgtggggagctggccctcaaggacgccaggaacaagct 1470
                |||||||||||| || |||||||||||||||||||||||||||||||||| | |||||||
Sbjct: 18157226 tgccattgctgacgcagagcagcgtggggagctggccctcaaggacgccaagcacaagct 18157285

                                                                            
Query: 1471     ggccgagctggaggatgccctgcagaaggccaagcaggacatggcccggctgctgaggga 1530
                ||||||||||||||| ||||||||||||||||||||||||||||| || | |||| | ||
Sbjct: 18157286 ggccgagctggaggacgccctgcagaaggccaagcaggacatggcgcgacagctgcgtga 18157345

                                                                            
Query: 1531     gtaccaggagctcatgaacaccaagctggccctggacgtggagatcgccacctacaggaa 1590
                |||||||||||| ||||||  |||||||||||||||| | ||||||||||||||| | ||
Sbjct: 18157346 gtaccaggagctgatgaacgtcaagctggccctggacatcgagatcgccacctaccgcaa 18157405

                                       
Query: 1591     gctgctggagggcgaggagtgca 1613
                |||||||||||||||||||||||
Sbjct: 18157406 gctgctggagggcgaggagtgca 18157428



 Score =  268 bits (135), Expect = 1e-68
 Identities = 186/203 (91%)
 Strand = Plus / Minus

                                                                            
Query: 1411     tgccattgctgatgctgagcagcgtggggagctggccctcaaggacgccaggaacaagct 1470
                |||||||||||| || |||||||||||||||||||||||||||||||||| | |||||||
Sbjct: 18263593 tgccattgctgacgcagagcagcgtggggagctggccctcaaggacgccaagcacaagct 18263534

                                                                            
Query: 1471     ggccgagctggaggatgccctgcagaaggccaagcaggacatggcccggctgctgaggga 1530
                ||||||||||||||| ||||||||||||||||||||||||||||| || | |||| | ||
Sbjct: 18263533 ggccgagctggaggacgccctgcagaaggccaagcaggacatggcgcgacagctgcgtga 18263474

                                                                            
Query: 1531     gtaccaggagctcatgaacaccaagctggccctggacgtggagatcgccacctacaggaa 1590
                |||||||||||| ||||||  |||||||||||||||| | ||||||||||||||| | ||
Sbjct: 18263473 gtaccaggagctgatgaacgtcaagctggccctggacatcgagatcgccacctaccgcaa 18263414

                                       
Query: 1591     gctgctggagggcgaggagtgca 1613
                |||||||||||||||||||||||
Sbjct: 18263413 gctgctggagggcgaggagtgca 18263391



 Score =  258 bits (130), Expect = 1e-65
 Identities = 160/170 (94%)
 Strand = Plus / Plus

                                                                            
Query: 564      ctggcttccccgtctgcccccctggaggcattcaagaggtcaccgtcaaccagagtctcc 623
                |||||||||| || |||||||| |||||||| |||||||||||| ||||||||| |||||
Sbjct: 18200964 ctggcttccctgtgtgcccccccggaggcatccaagaggtcaccatcaaccagaatctcc 18201023

                                                                            
Query: 624      tgactccccttaacctgcaaatcgaccccaccatccagcgggtgaggaccgaggagcggg 683
                | || || || |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18201024 tcacccctctgaacctgcaaatcgaccccaccatccagcgggtgaggaccgaggagcggg 18201083

                                                                  
Query: 684      agcagatcaagaccctcaacaacaagttcgcctccttcatcgacaaggtg 733
                ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18201084 agcagatcaagaccctcaacaacaagttcgcctccttcatcgacaaggtg 18201133



 Score =  254 bits (128), Expect = 1e-64
 Identities = 128/128 (100%)
 Strand = Plus / Plus

                                                                            
Query: 1266     agtacgaagagctgcagcagacagctggccggcatggtgatgatctccgcaacaccaagc 1325
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18369613 agtacgaagagctgcagcagacagctggccggcatggtgatgatctccgcaacaccaagc 18369672

                                                                            
Query: 1326     atgagatctctgaaatgaacaggatgatccagaggctgagagctgagatcgacaacgtca 1385
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18369673 atgagatctctgaaatgaacaggatgatccagaggctgagagctgagatcgacaacgtca 18369732

                        
Query: 1386     agaagcag 1393
                ||||||||
Sbjct: 18369733 agaagcag 18369740



 Score =  238 bits (120), Expect = 9e-60
 Identities = 150/160 (93%)
 Strand = Plus / Minus

                                                                            
Query: 573      ccgtctgcccccctggaggcattcaagaggtcaccgtcaaccagagtctcctgactcccc 632
                ||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||
Sbjct: 18285304 ccgtctgcccccccggaggcatccaagaggtcacggtcaaccagagtctcctgactcccc 18285245

                                                                            
Query: 633      ttaacctgcaaatcgaccccaccatccagcgggtgaggaccgaggagcgggagcagatca 692
                | ||||| |||||||| |||||||||||||||||| |||  ||||||||||| |||||||
Sbjct: 18285244 tcaacctacaaatcgatcccaccatccagcgggtgcggaaagaggagcgggaacagatca 18285185

                                                        
Query: 693      agaccctcaacaacaagttcgcctccttcatcgacaaggt 732
                ||||||||||||||||||||||||||||||||||||||||
Sbjct: 18285184 agaccctcaacaacaagttcgcctccttcatcgacaaggt 18285145



 Score =  228 bits (115), Expect = 9e-57
 Identities = 196/223 (87%)
 Strand = Plus / Minus

                                                                            
Query: 1391     cagtgcgccaacctgcagaatgccattgctgatgctgagcagcgtggggagctggccctc 1450
                |||||||||| |||||| |  ||||| || || || || |||||||| || |||||||||
Sbjct: 18100184 cagtgcgccagcctgcaaacagccatcgccgacgcagaacagcgtggagaactggccctc 18100125

                                                                            
Query: 1451     aaggacgccaggaacaagctggccgagctggaggatgccctgcagaaggccaagcaggac 1510
                ||||| ||  ||  ||||||||  || |||||||||||||||||||||||||||||||||
Sbjct: 18100124 aaggatgcacgggccaagctggtggacctggaggatgccctgcagaaggccaagcaggac 18100065

                                                                            
Query: 1511     atggcccggctgctgagggagtaccaggagctcatgaacaccaagctggccctggacgtg 1570
                ||||| |||||||||   |||||||||||||||||||||| ||||||||| |||||||||
Sbjct: 18100064 atggcacggctgctgcacgagtaccaggagctcatgaacatcaagctggctctggacgtg 18100005

                                                           
Query: 1571     gagatcgccacctacaggaagctgctggagggcgaggagtgca 1613
                |||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 18100004 gagatcgccacctacaggaagctgctagagggagaggagtgca 18099962



 Score =  228 bits (115), Expect = 9e-57
 Identities = 196/223 (87%)
 Strand = Plus / Minus

                                                                            
Query: 1391     cagtgcgccaacctgcagaatgccattgctgatgctgagcagcgtggggagctggccctc 1450
                |||||||||| |||||| |  ||||| || || || || |||||||| || |||||||||
Sbjct: 18279154 cagtgcgccagcctgcaaacagccatcgccgacgcagaacagcgtggagaactggccctc 18279095

                                                                            
Query: 1451     aaggacgccaggaacaagctggccgagctggaggatgccctgcagaaggccaagcaggac 1510
                ||||| ||  ||  ||||||||  || |||||||||||||||||||||||||||||||||
Sbjct: 18279094 aaggatgcacgggccaagctggtggacctggaggatgccctgcagaaggccaagcaggac 18279035

                                                                            
Query: 1511     atggcccggctgctgagggagtaccaggagctcatgaacaccaagctggccctggacgtg 1570
                ||||| |||||||||   |||||||||||||||||||||| ||||||||| |||||||||
Sbjct: 18279034 atggcacggctgctgcacgagtaccaggagctcatgaacatcaagctggctctggacgtg 18278975

                                                           
Query: 1571     gagatcgccacctacaggaagctgctggagggcgaggagtgca 1613
                |||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 18278974 gagatcgccacctacaggaagctgctagagggagaggagtgca 18278932



 Score =  202 bits (102), Expect = 5e-49
 Identities = 150/166 (90%)
 Strand = Plus / Minus

                                                                            
Query: 1102     ggagctgtcccagatgcagacacatgtctcagacacatctgtggtcctctctatggacaa 1161
                |||||||||||| |||||||||||||||   |||||||| |||||||| || ||||||||
Sbjct: 18281909 ggagctgtcccaaatgcagacacatgtcagcgacacatcggtggtcctgtccatggacaa 18281850

                                                                            
Query: 1162     caaccgcaacctggacctggacagcatcatcgccgaggtcaaggcccagtacgaggacat 1221
                |||||||| ||||||||||||||||||||||||||||||||| || ||||| ||||||||
Sbjct: 18281849 caaccgcagcctggacctggacagcatcatcgccgaggtcaaagcacagtatgaggacat 18281790

                                                              
Query: 1222     cgccaaccgcagccgcacggaagccgagtcctggtaccagaccaag 1267
                |||||||||||||||  | || || |||||||||||||||||||||
Sbjct: 18281789 cgccaaccgcagccgggccgaggctgagtcctggtaccagaccaag 18281744



 Score =  196 bits (99), Expect = 3e-47
 Identities = 99/99 (100%)
 Strand = Plus / Plus

                                                                            
Query: 1005     aggatgtggacgccgcctacatgaacaaggtggagctggaagccaaggtcgatgcactga 1064
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18368423 aggatgtggacgccgcctacatgaacaaggtggagctggaagccaaggtcgatgcactga 18368482

                                                       
Query: 1065     tggatgagatcaacttcacgaagatgttctttgaggcgg 1103
                |||||||||||||||||||||||||||||||||||||||
Sbjct: 18368483 tggatgagatcaacttcacgaagatgttctttgaggcgg 18368521



 Score =  176 bits (89), Expect = 3e-41
 Identities = 177/201 (88%), Gaps = 4/201 (1%)
 Strand = Plus / Minus

                                                                            
Query: 1411     tgccattgctgatgctgagcagcgtggggagctggccctcaaggacgc-caggaacaagc 1469
                ||||||||||||||| ||||||||||||||||||||  ||||||| || ||||  |||||
Sbjct: 18664395 tgccattgctgatgccgagcagcgtggggagctggctgtcaaggatgctcaggc-caagc 18664337

                                                                            
Query: 1470     tggccgagctggaggatgccctgcagaag-gccaagcaggacatggcccggctgctgagg 1528
                |||||||||||||||  |||||| ||||  ||||||||||||||||| |||| |||| | 
Sbjct: 18664336 tggccgagctggaggccgccctg-agaaccgccaagcaggacatggcgcggcagctgcgt 18664278

                                                                            
Query: 1529     gagtaccaggagctcatgaacaccaagctggccctggacgtggagatcgccacctacagg 1588
                ||||||||||| || |||||   |||||||||||||||||||||||||||||||||| | 
Sbjct: 18664277 gagtaccaggaactgatgaatgtcaagctggccctggacgtggagatcgccacctaccgc 18664218

                                     
Query: 1589     aagctgctggagggcgaggag 1609
                |||||||||||||| ||||||
Sbjct: 18664217 aagctgctggagggagaggag 18664197



 Score =  167 bits (84), Expect = 3e-38
 Identities = 132/148 (89%)
 Strand = Plus / Minus

                                                                            
Query: 1465     caagctggccgagctggaggatgccctgcagaaggccaagcaggacatggcccggctgct 1524
                |||||||| ||||||||||| |||||||||  |||||||| ||||  |||||||| ||||
Sbjct: 18443034 caagctggacgagctggagggtgccctgcaccaggccaaggaggagctggcccggatgct 18442975

                                                                            
Query: 1525     gagggagtaccaggagctcatgaacaccaagctggccctggacgtggagatcgccaccta 1584
                | | ||||||||||||||||||| ||| ||||||||||||||| | ||||||||||||||
Sbjct: 18442974 gcgcgagtaccaggagctcatgagcacaaagctggccctggacatcgagatcgccaccta 18442915

                                            
Query: 1585     caggaagctgctggagggcgaggagtgc 1612
                | | ||||||||||||||||||||||||
Sbjct: 18442914 ccgcaagctgctggagggcgaggagtgc 18442887



 Score =  165 bits (83), Expect = 1e-37
 Identities = 179/211 (84%)
 Strand = Plus / Minus

                                                                            
Query: 1403     ctgcagaatgccattgctgatgctgagcagcgtggggagctggccctcaaggacgccagg 1462
                ||||||| |||| |||||||||||||||||||||||||| ||||||||||||| ||||  
Sbjct: 18571305 ctgcagactgccgttgctgatgctgagcagcgtggggagatggccctcaaggatgccaat 18571246

                                                                            
Query: 1463     aacaagctggccgagctggaggatgccctgcagaaggccaagcaggacatggcccggctg 1522
                  ||||||    ||||||  || |||||| ||| |||||||| | ||| | |||||||||
Sbjct: 18571245 gccaagctccaagagctgcgggctgccctacagcaggccaaggatgaccttgcccggctg 18571186

                                                                            
Query: 1523     ctgagggagtaccaggagctcatgaacaccaagctggccctggacgtggagatcgccacc 1582
                ||| | || ||||||||||| |||||   ||||||||||||||| |||||||||||||||
Sbjct: 18571185 ctgcgtgactaccaggagctgatgaatgtcaagctggccctggatgtggagatcgccacc 18571126

                                               
Query: 1583     tacaggaagctgctggagggcgaggagtgca 1613
                ||| | ||||| |||||||||||||||||||
Sbjct: 18571125 taccgcaagctcctggagggcgaggagtgca 18571095



 Score =  161 bits (81), Expect = 2e-36
 Identities = 132/149 (88%)
 Strand = Plus / Minus

                                                                            
Query: 585      ctggaggcattcaagaggtcaccgtcaaccagagtctcctgactccccttaacctgcaaa 644
                |||| ||||| || |||||||| |||||||||||||||||||| |||||  ||||| | |
Sbjct: 18093016 ctgggggcatccaggaggtcactgtcaaccagagtctcctgacccccctccacctggaga 18092957

                                                                            
Query: 645      tcgaccccaccatccagcgggtgaggaccgaggagcgggagcagatcaagaccctcaaca 704
                |||| ||  || ||||||||||| |||  ||||||||||||||||||||||| |||||||
Sbjct: 18092956 tcgatccatccctccagcgggtgcggaaggaggagcgggagcagatcaagactctcaaca 18092897

                                             
Query: 705      acaagttcgcctccttcatcgacaaggtg 733
                |||||||||||||||||||||||||||||
Sbjct: 18092896 acaagttcgcctccttcatcgacaaggtg 18092868



 Score =  161 bits (81), Expect = 2e-36
 Identities = 168/197 (85%)
 Strand = Plus / Plus

                                                                            
Query: 1413     ccattgctgatgctgagcagcgtggggagctggccctcaaggacgccaggaacaagctgg 1472
                |||| ||||| ||||||||||  || |||  ||||||||| || |||| |  ||||||||
Sbjct: 18176700 ccatagctgaggctgagcagcagggtgaggcggccctcaacgatgccaagtgcaagctgg 18176759

                                                                            
Query: 1473     ccgagctggaggatgccctgcagaaggccaagcaggacatggcccggctgctgagggagt 1532
                | | ||||||||| |||||||||||||||||||||||||||||| | ||||| | |||||
Sbjct: 18176760 cagggctggaggaggccctgcagaaggccaagcaggacatggcctgcctgctcaaggagt 18176819

                                                                            
Query: 1533     accaggagctcatgaacaccaagctggccctggacgtggagatcgccacctacaggaagc 1592
                |||||||| | |||||| ||||||||| ||||||| | ||||||||||||||| ||   |
Sbjct: 18176820 accaggaggtgatgaactccaagctgggcctggacatcgagatcgccacctaccggcgcc 18176879

                                 
Query: 1593     tgctggagggcgaggag 1609
                |||||||||||||||||
Sbjct: 18176880 tgctggagggcgaggag 18176896



 Score =  161 bits (81), Expect = 2e-36
 Identities = 168/197 (85%)
 Strand = Plus / Minus

                                                                            
Query: 1413     ccattgctgatgctgagcagcgtggggagctggccctcaaggacgccaggaacaagctgg 1472
                |||| ||||| ||||||||||  || |||  ||||||||| || |||| |  ||||||||
Sbjct: 18245156 ccatagctgaggctgagcagcagggtgaggcggccctcaacgatgccaagtgcaagctgg 18245097

                                                                            
Query: 1473     ccgagctggaggatgccctgcagaaggccaagcaggacatggcccggctgctgagggagt 1532
                | | ||||||||| |||||||||||||||||||||||||||||| | ||||| | |||||
Sbjct: 18245096 cagggctggaggaggccctgcagaaggccaagcaggacatggcctgcctgctcaaggagt 18245037

                                                                            
Query: 1533     accaggagctcatgaacaccaagctggccctggacgtggagatcgccacctacaggaagc 1592
                |||||||| | |||||| ||||||||| ||||||| | ||||||||||||||| ||   |
Sbjct: 18245036 accaggaggtgatgaactccaagctgggcctggacatcgagatcgccacctaccggcgcc 18244977

                                 
Query: 1593     tgctggagggcgaggag 1609
                |||||||||||||||||
Sbjct: 18244976 tgctggagggcgaggag 18244960



 Score =  161 bits (81), Expect = 2e-36
 Identities = 132/149 (88%)
 Strand = Plus / Minus

                                                                            
Query: 585      ctggaggcattcaagaggtcaccgtcaaccagagtctcctgactccccttaacctgcaaa 644
                |||| ||||| || |||||||| |||||||||||||||||||| |||||  ||||| | |
Sbjct: 18272341 ctgggggcatccaggaggtcactgtcaaccagagtctcctgacccccctccacctggaga 18272282

                                                                            
Query: 645      tcgaccccaccatccagcgggtgaggaccgaggagcgggagcagatcaagaccctcaaca 704
                |||| ||  || ||||||||||| |||  ||||||||||||||||||||||| |||||||
Sbjct: 18272281 tcgatccatccctccagcgggtgcggaaggaggagcgggagcagatcaagactctcaaca 18272222

                                             
Query: 705      acaagttcgcctccttcatcgacaaggtg 733
                |||||||||||||||||||||||||||||
Sbjct: 18272221 acaagttcgcctccttcatcgacaaggtg 18272193



 Score =  161 bits (81), Expect = 2e-36
 Identities = 190/225 (84%), Gaps = 6/225 (2%)
 Strand = Plus / Minus

                                                                            
Query: 729      aggtgcggttcctggagcagcagaacaaggtcctggacaccaagtggaccctgctgcagg 788
                |||||||||||||||||||||||||||||||||| || ||||||||||  ||||| ||| 
Sbjct: 18573891 aggtgcggttcctggagcagcagaacaaggtcctagagaccaagtggaatctgctccagc 18573832

                                                                            
Query: 789      agcagggcaccaagactgtca--ggcag----aacctggagcctttgttcgagcagtaca 842
                |||||||||| ||  |  |||  ||||     ||||| |||||  | || ||| | ||||
Sbjct: 18573831 agcagggcacaaattccatcacaggcaccaacaacctcgagcccctttttgagaactaca 18573772

                                                                            
Query: 843      tcaacaacctcaggagacagctggacagcatcctgggggagagaggccgcctggactcag 902
                |||||  ||  |||||  | |||||||||||||||||||||| |||||||||||||||||
Sbjct: 18573771 tcaactcccagaggagctacctggacagcatcctgggggagaaaggccgcctggactcag 18573712

                                                             
Query: 903      agctgaggaacatgcaggacctggtggaggacttcaagaacaagt 947
                |||||||||||||||| ||||||||||||||||||||||| ||||
Sbjct: 18573711 agctgaggaacatgcaagacctggtggaggacttcaagaagaagt 18573667



 Score =  155 bits (78), Expect = 1e-34
 Identities = 186/222 (83%)
 Strand = Plus / Minus

                                                                            
Query: 1391     cagtgcgccaacctgcagaatgccattgctgatgctgagcagcgtggggagctggccctc 1450
                |||||| |||||||| |||  |||||||| || || |||||||| |||||    ||||| 
Sbjct: 18409920 cagtgctccaacctggagacagccattgccgacgccgagcagcggggggaaaatgccctg 18409861

                                                                            
Query: 1451     aaggacgccaggaacaagctggccgagctggaggatgccctgcagaaggccaagcaggac 1510
                ||||| ||| ||  |||||||| ||| ||||||| |||||| ||  |||||||| |||| 
Sbjct: 18409860 aaggatgcccgggccaagctggacgaactggagggtgccctacaccaggccaaggaggag 18409801

                                                                            
Query: 1511     atggcccggctgctgagggagtaccaggagctcatgaacaccaagctggccctggacgtg 1570
                 |||||||| ||||| ||||||||||||||||||||| |   ||||||||| ||||| ||
Sbjct: 18409800 ctggcccggatgctgcgggagtaccaggagctcatgagcctgaagctggccttggacatg 18409741

                                                          
Query: 1571     gagatcgccacctacaggaagctgctggagggcgaggagtgc 1612
                ||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 18409740 gagatcgccacctaccgcaagctgctggagggcgaggagtgc 18409699



 Score =  153 bits (77), Expect = 4e-34
 Identities = 92/97 (94%)
 Strand = Plus / Minus

                                                                            
Query: 729      aggtgcggttcctggagcagcagaacaaggtcctggacaccaagtggaccctgctgcagg 788
                ||||||||||||||||||||||||||||||| ||||| |||||||||| ||| |||||||
Sbjct: 18284656 aggtgcggttcctggagcagcagaacaaggttctggagaccaagtggagcctcctgcagg 18284597

                                                     
Query: 789      agcagggcaccaagactgtcaggcagaacctggagcc 825
                |||||||||||| ||||||||||||||||||||||||
Sbjct: 18284596 agcagggcaccaggactgtcaggcagaacctggagcc 18284560



 Score =  151 bits (76), Expect = 2e-33
 Identities = 163/192 (84%)
 Strand = Plus / Minus

                                                                            
Query: 1418     gctgatgctgagcagcgtggggagctggccctcaaggacgccaggaacaagctggccgag 1477
                ||||| ||||||||||  || ||| |||||||||| || |||| |  ||||||||| |||
Sbjct: 18088249 gctgaagctgagcagcagggcgaggtggccctcaacgatgccaagtgcaagctggcggag 18088190

                                                                            
Query: 1478     ctggaggatgccctgcagaaggccaagcaggacatggcccggctgctgagggagtaccag 1537
                |||||||  |||||||||||||||||||||||||||||| | ||| | | ||||||||||
Sbjct: 18088189 ctggaggccgccctgcagaaggccaagcaggacatggcctgcctgatcaaggagtaccag 18088130

                                                                            
Query: 1538     gagctcatgaacaccaagctggccctggacgtggagatcgccacctacaggaagctgctg 1597
                ||| |  ||||| ||||||||| ||||||| | ||||||||||||||| ||   ||||||
Sbjct: 18088129 gaggtgctgaactccaagctgggcctggacatcgagatcgccacctaccggcgcctgctg 18088070

                            
Query: 1598     gagggcgaggag 1609
                ||||||||||||
Sbjct: 18088069 gagggcgaggag 18088058



 Score =  151 bits (76), Expect = 2e-33
 Identities = 163/192 (84%)
 Strand = Plus / Plus

                                                                            
Query: 1418     gctgatgctgagcagcgtggggagctggccctcaaggacgccaggaacaagctggccgag 1477
                ||||| ||||||||||  || ||| |||||||||| || |||| |  ||||||||| |||
Sbjct: 18112857 gctgaagctgagcagcagggcgaggtggccctcaacgatgccaagtgcaagctggcggag 18112916

                                                                            
Query: 1478     ctggaggatgccctgcagaaggccaagcaggacatggcccggctgctgagggagtaccag 1537
                |||||||  |||||||||||||||||||||||||||||| | ||| | | ||||||||||
Sbjct: 18112917 ctggaggccgccctgcagaaggccaagcaggacatggcctgcctgatcaaggagtaccag 18112976

                                                                            
Query: 1538     gagctcatgaacaccaagctggccctggacgtggagatcgccacctacaggaagctgctg 1597
                ||| |  ||||| ||||||||| ||||||| | ||||||||||||||| ||   ||||||
Sbjct: 18112977 gaggtgctgaactccaagctgggcctggacatcgagatcgccacctaccggcgcctgctg 18113036

                            
Query: 1598     gagggcgaggag 1609
                ||||||||||||
Sbjct: 18113037 gagggcgaggag 18113048



 Score =  147 bits (74), Expect = 2e-32
 Identities = 80/82 (97%)
 Strand = Plus / Plus

                                                                            
Query: 1749     gtggaagtctgggcggtggaattggtggaggtggtggaagcagctactactccagcagca 1808
                ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 18371563 gtggaggtctgggcggtggaattggtggaggtggtggcagcagctactactccagcagca 18371622

                                      
Query: 1809     gcagcgggggcgtaggccttgg 1830
                ||||||||||||||||||||||
Sbjct: 18371623 gcagcgggggcgtaggccttgg 18371644



 Score =  145 bits (73), Expect = 1e-31
 Identities = 106/117 (90%)
 Strand = Plus / Minus

                                                                            
Query: 1497     aggccaagcaggacatggcccggctgctgagggagtaccaggagctcatgaacaccaagc 1556
                |||||||| ||||  |||||||  ||||| ||||||||||||||||||||| ||| ||||
Sbjct: 18385610 aggccaaggaggagctggcccgaatgctgcgggagtaccaggagctcatgagcacaaagc 18385551

                                                                         
Query: 1557     tggccctggacgtggagatcgccacctacaggaagctgctggagggcgaggagtgca 1613
                ||||||||||||||||||||||||||||| | |||||||| ||||||||||||||||
Sbjct: 18385550 tggccctggacgtggagatcgccacctaccgcaagctgctagagggcgaggagtgca 18385494



 Score =  145 bits (73), Expect = 1e-31
 Identities = 145/169 (85%)
 Strand = Plus / Minus

                                                                            
Query: 1421     gatgctgagcagcgtggggagctggccctcaaggacgccaggaacaagctggccgagctg 1480
                ||||| ||||||||||| |||   |||||||| || |||  ||||||||||   ||||||
Sbjct: 18507816 gatgcagagcagcgtggtgagaatgccctcaaagatgcccagaacaagctgaatgagctg 18507757

                                                                            
Query: 1481     gaggatgccctgcagaaggccaagcaggacatggcccggctgctgagggagtaccaggag 1540
                ||||| |||||||||||||||||| ||||| ||||||| |||||| | || |||||||| 
Sbjct: 18507756 gaggaggccctgcagaaggccaaggaggacctggcccgcctgctgcgtgactaccaggaa 18507697

                                                                 
Query: 1541     ctcatgaacaccaagctggccctggacgtggagatcgccacctacagga 1589
                || ||||||||||| |||||||||||||||||||| |||||||| ||||
Sbjct: 18507696 ctgatgaacaccaaactggccctggacgtggagattgccacctatagga 18507648



 Score =  143 bits (72), Expect = 4e-31
 Identities = 162/192 (84%)
 Strand = Plus / Plus

                                                                            
Query: 1418     gctgatgctgagcagcgtggggagctggccctcaaggacgccaggaacaagctggccgag 1477
                ||||| ||||||||||  || ||| |||||||||| || |||| |  ||||||||| |||
Sbjct: 18078912 gctgaagctgagcagcagggcgaggtggccctcaacgatgccaagtgcaagctggcggag 18078971

                                                                            
Query: 1478     ctggaggatgccctgcagaaggccaagcaggacatggcccggctgctgagggagtaccag 1537
                |||||||  |||||||||||||||||||||||||||||| | ||| | | ||||||||||
Sbjct: 18078972 ctggaggccgccctgcagaaggccaagcaggacatggcctgcctgatcaaggagtaccag 18079031

                                                                            
Query: 1538     gagctcatgaacaccaagctggccctggacgtggagatcgccacctacaggaagctgctg 1597
                ||| |  ||||| |||||||||  |||||| | ||||||||||||||| ||   ||||||
Sbjct: 18079032 gaggtgctgaactccaagctgggtctggacatcgagatcgccacctaccggcgcctgctg 18079091

                            
Query: 1598     gagggcgaggag 1609
                ||||||||||||
Sbjct: 18079092 gagggcgaggag 18079103



 Score =  143 bits (72), Expect = 4e-31
 Identities = 180/216 (83%)
 Strand = Plus / Minus

                                                                            
Query: 1398     ccaacctgcagaatgccattgctgatgctgagcagcgtggggagctggccctcaaggacg 1457
                ||||||||||||  ||| | |||||||| |||||||| |||||| |||| |||||||| |
Sbjct: 18542584 ccaacctgcagacggccgtcgctgatgcagagcagcggggggaggtggctctcaaggatg 18542525

                                                                            
Query: 1458     ccaggaacaagctggccgagctggaggatgccctgcagaaggccaagcaggacatggccc 1517
                |    | ||||||    |||||  ||| |||||||||| | |||||| ||||| ||||||
Sbjct: 18542524 ctgacaccaagcttcaggagctcaaggttgccctgcagcaagccaaggaggacctggccc 18542465

                                                                            
Query: 1518     ggctgctgagggagtaccaggagctcatgaacaccaagctggccctggacgtggagatcg 1577
                ||||||||| ||||||||||||| | |||||   |||||||||||||||||| |||||||
Sbjct: 18542464 ggctgctgaaggagtaccaggagttgatgaatgtcaagctggccctggacgttgagatcg 18542405

                                                    
Query: 1578     ccacctacaggaagctgctggagggcgaggagtgca 1613
                ||||||||||||  || ||||| |||||||||||||
Sbjct: 18542404 ccacctacaggaccctcctggaaggcgaggagtgca 18542369



 Score =  143 bits (72), Expect = 4e-31
 Identities = 96/104 (92%)
 Strand = Plus / Minus

                                                                            
Query: 1133     gacacatctgtggtcctctctatggacaacaaccgcaacctggacctggacagcatcatc 1192
                ||||| || ||||||||||| |||||||||| ||||  ||||||||||||| ||||||||
Sbjct: 18665506 gacacctccgtggtcctctccatggacaacagccgctccctggacctggacggcatcatc 18665447

                                                            
Query: 1193     gccgaggtcaaggcccagtacgaggacatcgccaaccgcagccg 1236
                |||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 18665446 gccgaggtcaaggcccagtacgaggagatcgccaaccgcagccg 18665403



 Score =  141 bits (71), Expect = 2e-30
 Identities = 179/215 (83%)
 Strand = Plus / Minus

                                                                            
Query: 1398     ccaacctgcagaatgccattgctgatgctgagcagcgtggggagctggccctcaaggacg 1457
                |||||||| |||  ||||| |||||||| |||||||| || ||    ||||| ||||| |
Sbjct: 18480165 ccaacctggagacggccatcgctgatgccgagcagcggggagacaacgccctgaaggatg 18480106

                                                                            
Query: 1458     ccaggaacaagctggccgagctggaggatgccctgcagaaggccaagcaggacatggccc 1517
                || ||  |||||||| ||||||||||| |||||||||  |||||||| | ||  ||||||
Sbjct: 18480105 cccgggccaagctggacgagctggagggtgccctgcaccaggccaaggaagagctggccc 18480046

                                                                            
Query: 1518     ggctgctgagggagtaccaggagctcatgaacaccaagctggccctggacgtggagatcg 1577
                || ||||| ||||||||||||| ||||||| |   ||||||||| ||||| |||||||||
Sbjct: 18480045 ggatgctgcgggagtaccaggaactcatgagcctgaagctggccttggacatggagatcg 18479986

                                                   
Query: 1578     ccacctacaggaagctgctggagggcgaggagtgc 1612
                |||||||| | |||||||||||| |||||||||||
Sbjct: 18479985 ccacctaccgcaagctgctggagagcgaggagtgc 18479951



 Score =  141 bits (71), Expect = 2e-30
 Identities = 119/135 (88%)
 Strand = Plus / Minus

                                                                            
Query: 1479     tggaggatgccctgcagaaggccaagcaggacatggcccggctgctgagggagtaccagg 1538
                ||||||| ||||||||| |||||||  |||||||||||||||||||| | || |||||||
Sbjct: 18523797 tggaggacgccctgcagcaggccaaagaggacatggcccggctgctgcgcgactaccagg 18523738

                                                                            
Query: 1539     agctcatgaacaccaagctggccctggacgtggagatcgccacctacaggaagctgctgg 1598
                ||||  ||   ||||||||| || ||||||||||||||||||||||| | ||||||||||
Sbjct: 18523737 agctgctgggaaccaagctgtccttggacgtggagatcgccacctaccgcaagctgctgg 18523678

                               
Query: 1599     agggcgaggagtgca 1613
                |||||||||||||||
Sbjct: 18523677 agggcgaggagtgca 18523663



 Score =  139 bits (70), Expect = 6e-30
 Identities = 164/190 (86%), Gaps = 4/190 (2%)
 Strand = Plus / Minus

                                                                            
Query: 1421     gatgctgagcagcgtggggagctggccctcaaggacgc-caggaacaagctggccgagct 1479
                ||||| ||||| ||||| |||||||||||||||||||| ||||  |||||||| ||||||
Sbjct: 18619009 gatgccgagcatcgtggtgagctggccctcaaggacgctcaggc-caagctggtcgagct 18618951

                                                                            
Query: 1480     ggaggatgccctgcagaag-gccaagcaggacatggcccggctgctgagggagtaccagg 1538
                |||||  || ||| ||||  |||||||||||| |||| ||||||||| | ||||||||||
Sbjct: 18618950 ggaggccgctctg-agaactgccaagcaggacctggcacggctgctgcgcgagtaccagg 18618892

                                                                            
Query: 1539     agctcatgaacaccaagctggccctggacgtggagatcgccacctacaggaagctgctgg 1598
                |||| |||| |   |||||||||||||| |||||||||||||||||| | | ||||||||
Sbjct: 18618891 agctgatgagcttgaagctggccctggatgtggagatcgccacctaccgcaggctgctgg 18618832

                          
Query: 1599     agggcgagga 1608
                ||||||||||
Sbjct: 18618831 agggcgagga 18618822



 Score =  137 bits (69), Expect = 2e-29
 Identities = 126/145 (86%)
 Strand = Plus / Plus

                                                                            
Query: 1465     caagctggccgagctggaggatgccctgcagaaggccaagcaggacatggcccggctgct 1524
                ||||||||| ||||||||||  |||||||||||||||||||||||||||||| | ||| |
Sbjct: 18033954 caagctggcggagctggaggccgccctgcagaaggccaagcaggacatggcctgcctggt 18034013

                                                                            
Query: 1525     gagggagtaccaggagctcatgaacaccaagctggccctggacgtggagatcgccaccta 1584
                 | ||||||||||||| |  ||||| ||||||||| ||||||| | ||||||||||||||
Sbjct: 18034014 caaggagtaccaggaggtgctgaactccaagctgggcctggacatcgagatcgccaccta 18034073

                                         
Query: 1585     caggaagctgctggagggcgaggag 1609
                | ||   ||||||||||||||||||
Sbjct: 18034074 ccggcgcctgctggagggcgaggag 18034098



 Score =  135 bits (68), Expect = 1e-28
 Identities = 161/192 (83%)
 Strand = Plus / Minus

                                                                            
Query: 1421     gatgctgagcagcgtggggagctggccctcaaggacgccaggaacaagctggccgagctg 1480
                ||||| |||||||||||||||  |||||| ||||| |||   | |||||  || ||||||
Sbjct: 18586433 gatgcagagcagcgtggggaggcggccctaaaggatgcctacagcaagcgtgcagagctg 18586374

                                                                            
Query: 1481     gaggatgccctgcagaaggccaagcaggacatggcccggctgctgagggagtaccaggag 1540
                |||| ||||||| ||||||||||| ||||  |||||||| ||||| | || |||||||||
Sbjct: 18586373 gaggctgccctgaagaaggccaaggaggagctggcccggatgctgcgtgaataccaggag 18586314

                                                                            
Query: 1541     ctcatgaacaccaagctggccctggacgtggagatcgccacctacaggaagctgctggag 1600
                || |||| |   ||||||||| ||||| | ||||||||||||||| | ||||||||||||
Sbjct: 18586313 ctgatgagcgtgaagctggccttggacattgagatcgccacctaccgcaagctgctggag 18586254

                            
Query: 1601     ggcgaggagtgc 1612
                ||||||||||||
Sbjct: 18586253 ggcgaggagtgc 18586242



 Score =  131 bits (66), Expect = 1e-27
 Identities = 87/94 (92%)
 Strand = Plus / Plus

                                                                            
Query: 1128     tctcagacacatctgtggtcctctctatggacaacaaccgcaacctggacctggacagca 1187
                |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 18203077 tctcagacacgtctgtggtcctctccatggacaacaaccgcaacctggacctggacagca 18203136

                                                  
Query: 1188     tcatcgccgaggtcaaggcccagtacgaggacat 1221
                ||||||| || ||||| ||||| || ||||||||
Sbjct: 18203137 tcatcgctgaagtcaaagcccaatatgaggacat 18203170



 Score =  125 bits (63), Expect = 9e-26
 Identities = 108/123 (87%)
 Strand = Plus / Minus

                                                                            
Query: 1487     gccctgcagaaggccaagcaggacatggcccggctgctgagggagtaccaggagctcatg 1546
                ||||||||  |||||||| ||||| |||||||||||||| | || |||||||  ||||||
Sbjct: 18603928 gccctgcaccaggccaaggaggacctggcccggctgctgcgtgactaccaggccctcatg 18603869

                                                                            
Query: 1547     aacaccaagctggccctggacgtggagatcgccacctacaggaagctgctggagggcgag 1606
                |||  |||||||||||||||||||||||||||||||||| | |||||||||||| | |||
Sbjct: 18603868 aacgtcaagctggccctggacgtggagatcgccacctaccgaaagctgctggagagtgag 18603809

                   
Query: 1607     gag 1609
                |||
Sbjct: 18603808 gag 18603806



 Score =  123 bits (62), Expect = 4e-25
 Identities = 62/62 (100%)
 Strand = Plus / Plus

                                                                            
Query: 946      gtatgaagatgaaatcaacaagcgtaccacagccgagaatgaatttgtgatgctgaagaa 1005
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18368254 gtatgaagatgaaatcaacaagcgtaccacagccgagaatgaatttgtgatgctgaagaa 18368313

                  
Query: 1006     gg 1007
                ||
Sbjct: 18368314 gg 18368315



 Score =  121 bits (61), Expect = 1e-24
 Identities = 112/129 (86%)
 Strand = Plus / Plus

                                                                            
Query: 1139     tctgtggtcctctctatggacaacaaccgcaacctggacctggacagcatcatcgccgag 1198
                |||||| |||| || ||||||||||||||||| |||||||| |||||||||||| |||||
Sbjct: 18155540 tctgtgatcctgtccatggacaacaaccgcaagctggacctagacagcatcatctccgag 18155599

                                                                            
Query: 1199     gtcaaggcccagtacgaggacatcgccaaccgcagccgcacggaagccgagtcctggtac 1258
                |||||||||||||| |||||||| |||||||| || ||  | || || ||||| ||||||
Sbjct: 18155600 gtcaaggcccagtatgaggacattgccaaccgtagtcgggctgaggctgagtcttggtac 18155659

                         
Query: 1259     cagaccaag 1267
                |||| ||||
Sbjct: 18155660 cagatcaag 18155668



 Score =  121 bits (61), Expect = 1e-24
 Identities = 112/129 (86%)
 Strand = Plus / Minus

                                                                            
Query: 1139     tctgtggtcctctctatggacaacaaccgcaacctggacctggacagcatcatcgccgag 1198
                |||||| |||| || ||||||||||||||||| |||||||| |||||||||||| |||||
Sbjct: 18265451 tctgtgatcctgtccatggacaacaaccgcaagctggacctagacagcatcatctccgag 18265392

                                                                            
Query: 1199     gtcaaggcccagtacgaggacatcgccaaccgcagccgcacggaagccgagtcctggtac 1258
                |||||||||||||| |||||||| |||||||| || ||  | || || ||||| ||||||
Sbjct: 18265391 gtcaaggcccagtatgaggacattgccaaccgtagtcgggctgaggctgagtcttggtac 18265332

                         
Query: 1259     cagaccaag 1267
                |||| ||||
Sbjct: 18265331 cagatcaag 18265323



 Score =  121 bits (61), Expect = 1e-24
 Identities = 103/117 (88%)
 Strand = Plus / Minus

                                                                            
Query: 1102     ggagctgtcccagatgcagacacatgtctcagacacatctgtggtcctctctatggacaa 1161
                ||||||||||||||||||||  ||||||   |||||||| || || ||||| ||||||||
Sbjct: 18572346 ggagctgtcccagatgcagagccatgtcagtgacacatccgtcgttctctccatggacaa 18572287

                                                                         
Query: 1162     caaccgcaacctggacctggacagcatcatcgccgaggtcaaggcccagtacgagga 1218
                ||| |||  |||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 18572286 caatcgcttcctggacctggatagcatcattgccgaggtcaaggcccagtacgagga 18572230



 Score =  117 bits (59), Expect = 2e-23
 Identities = 119/139 (85%)
 Strand = Plus / Minus

                                                                            
Query: 1475     gagctggaggatgccctgcagaaggccaagcaggacatggcccggctgctgagggagtac 1534
                ||||||||||| || ||||||||||||||  || || ||||| | |||||| | || |||
Sbjct: 18428310 gagctggaggaagctctgcagaaggccaaagagaacctggcctgcctgctgcgtgactac 18428251

                                                                            
Query: 1535     caggagctcatgaacaccaagctggccctggacgtggagatcgccacctacaggaagctg 1594
                |||||||| ||||||  |||||||||  |||| |||||||| ||||||||| | ||||||
Sbjct: 18428250 caggagctgatgaacgtcaagctggctttggatgtggagattgccacctaccgcaagctg 18428191

                                   
Query: 1595     ctggagggcgaggagtgca 1613
                |||||||||||||||||||
Sbjct: 18428190 ctggagggcgaggagtgca 18428172



 Score =  115 bits (58), Expect = 9e-23
 Identities = 124/146 (84%)
 Strand = Plus / Minus

                                                                            
Query: 1464     acaagctggccgagctggaggatgccctgcagaaggccaagcaggacatggcccggctgc 1523
                |||||||| | ||||||||||  ||||||||||||||||||||||||||||||   ||||
Sbjct: 18133451 acaagctgactgagctggaggcggccctgcagaaggccaagcaggacatggccttcctgc 18133392

                                                                            
Query: 1524     tgagggagtaccaggagctcatgaacaccaagctggccctggacgtggagatcgccacct 1583
                | | ||||||||||||| | ||||   |||||||||| |||||| | ||||| |||||||
Sbjct: 18133391 tcaaggagtaccaggaggtgatgagttccaagctggctctggacatcgagattgccacct 18133332

                                          
Query: 1584     acaggaagctgctggagggcgaggag 1609
                || ||   ||||||||||||||||||
Sbjct: 18133331 accggcgcctgctggagggcgaggag 18133306



 Score =  113 bits (57), Expect = 3e-22
 Identities = 102/117 (87%)
 Strand = Plus / Minus

                                                                            
Query: 1102     ggagctgtcccagatgcagacacatgtctcagacacatctgtggtcctctctatggacaa 1161
                ||||||||||||||||||||| || |||   ||||| ||||||||||| || ||||||||
Sbjct: 18587562 ggagctgtcccagatgcagacccacgtcagtgacacgtctgtggtcctgtccatggacaa 18587503

                                                                         
Query: 1162     caaccgcaacctggacctggacagcatcatcgccgaggtcaaggcccagtacgagga 1218
                ||||||  ||||||||||||||||||||||||| ||||||   |||||||| |||||
Sbjct: 18587502 caaccgggacctggacctggacagcatcatcgctgaggtccgcgcccagtatgagga 18587446



 Score =  111 bits (56), Expect = 1e-21
 Identities = 110/128 (85%)
 Strand = Plus / Minus

                                                                            
Query: 1266     agtacgaagagctgcagcagacagctggccggcatggtgatgatctccgcaacaccaagc 1325
                |||| ||||||||||||   ||||| || ||||| || || |||||||| |||||||| |
Sbjct: 18100437 agtatgaagagctgcaggtcacagccgggcggcacggcgacgatctccgaaacaccaaac 18100378

                                                                            
Query: 1326     atgagatctctgaaatgaacaggatgatccagaggctgagagctgagatcgacaacgtca 1385
                | ||||||||||| |  ||| |||||||||||||||||||||| |||||||||| |||||
Sbjct: 18100377 aagagatctctgagacaaaccggatgatccagaggctgagagccgagatcgacagcgtca 18100318

                        
Query: 1386     agaagcag 1393
                ||||||||
Sbjct: 18100317 agaagcag 18100310



 Score =  111 bits (56), Expect = 1e-21
 Identities = 110/128 (85%)
 Strand = Plus / Minus

                                                                            
Query: 1266     agtacgaagagctgcagcagacagctggccggcatggtgatgatctccgcaacaccaagc 1325
                |||| ||||||||||||   ||||| || ||||| || || |||||||| |||||||| |
Sbjct: 18279407 agtatgaagagctgcaggtcacagccgggcggcacggcgacgatctccgaaacaccaaac 18279348

                                                                            
Query: 1326     atgagatctctgaaatgaacaggatgatccagaggctgagagctgagatcgacaacgtca 1385
                | ||||||||||| |  ||| |||||||||||||||||||||| |||||||||| |||||
Sbjct: 18279347 aagagatctctgagacaaaccggatgatccagaggctgagagccgagatcgacagcgtca 18279288

                        
Query: 1386     agaagcag 1393
                ||||||||
Sbjct: 18279287 agaagcag 18279280



 Score =  109 bits (55), Expect = 5e-21
 Identities = 58/59 (98%)
 Strand = Plus / Minus

                                                                           
Query: 675      aggagcgggagcagatcaagaccctcaacaacaagttcgcctccttcatcgacaaggtg 733
                ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 18612724 aggagcgggagcagatcaagaccctcaacgacaagttcgcctccttcatcgacaaggtg 18612666



 Score =  107 bits (54), Expect = 2e-20
 Identities = 138/166 (83%)
 Strand = Plus / Plus

                                                                            
Query: 1444     ggccctcaaggacgccaggaacaagctggccgagctggaggatgccctgcagaaggccaa 1503
                ||||||||| || |||| || ||||||||| || || ||||  ||||| ||| |||||||
Sbjct: 18013640 ggccctcaatgatgccaagagcaagctggcagatctagagggcgcccttcagcaggccaa 18013699

                                                                            
Query: 1504     gcaggacatggcccggctgctgagggagtaccaggagctcatgaacaccaagctggccct 1563
                |||||||||||| || | |||| | |||||||||||||| |||||   |||| |||||||
Sbjct: 18013700 gcaggacatggcgcgccagctgcgtgagtaccaggagctgatgaatgtcaagttggccct 18013759

                                                              
Query: 1564     ggacgtggagatcgccacctacaggaagctgctggagggcgaggag 1609
                |||| | ||||||||||||||||||   ||||| || |||||||||
Sbjct: 18013760 ggacatcgagatcgccacctacaggcgcctgctagaaggcgaggag 18013805



 Score =  103 bits (52), Expect = 3e-19
 Identities = 64/68 (94%)
 Strand = Plus / Minus

                                                                            
Query: 729      aggtgcggttcctggagcagcagaacaaggtcctggacaccaagtggaccctgctgcagg 788
                |||||||||||||||||||||||||||| |||||||| |||||||||| ||| |||||||
Sbjct: 18546947 aggtgcggttcctggagcagcagaacaaagtcctggagaccaagtggagcctcctgcagg 18546888

                        
Query: 789      agcagggc 796
                ||||||||
Sbjct: 18546887 agcagggc 18546880



 Score =  101 bits (51), Expect = 1e-18
 Identities = 57/59 (96%)
 Strand = Plus / Minus

                                                                           
Query: 675      aggagcgggagcagatcaagaccctcaacaacaagttcgcctccttcatcgacaaggtg 733
                ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 18574949 aggagcgggagcagatcaagaccctcaacaacaagttcgcctccttcattgataaggtg 18574891



 Score =  101 bits (51), Expect = 1e-18
 Identities = 123/147 (83%)
 Strand = Plus / Minus

                                                                            
Query: 587      ggaggcattcaagaggtcaccgtcaaccagagtctcctgactccccttaacctgcaaatc 646
                ||||| |||||| |||||||| |||||||||| || || ||||| ||  || || | |||
Sbjct: 18592067 ggagggattcaacaggtcaccatcaaccagagcctgctcactccactccacgtggagatc 18592008

                                                                            
Query: 647      gaccccaccatccagcgggtgaggaccgaggagcgggagcagatcaagaccctcaacaac 706
                |||||    ||||||  |||  ||||| | ||||||||||||||||||| ||||||| ||
Sbjct: 18592007 gaccctgagatccagaaggtccggacccaagagcgggagcagatcaagatcctcaacgac 18591948

                                           
Query: 707      aagttcgcctccttcatcgacaaggtg 733
                |||||||||||||||||||||||||||
Sbjct: 18591947 aagttcgcctccttcatcgacaaggtg 18591921



 Score =  101 bits (51), Expect = 1e-18
 Identities = 63/67 (94%)
 Strand = Plus / Minus

                                                                            
Query: 1146     tcctctctatggacaacaaccgcaacctggacctggacagcatcatcgccgaggtcaagg 1205
                ||||||| |||||||||||||||||||| |||||||||||||||||||| ||||| ||||
Sbjct: 18605640 tcctctccatggacaacaaccgcaaccttgacctggacagcatcatcgctgaggttaagg 18605581

                       
Query: 1206     cccagta 1212
                |||||||
Sbjct: 18605580 cccagta 18605574



 Score = 97.6 bits (49), Expect = 2e-17
 Identities = 73/81 (90%)
 Strand = Plus / Plus

                                                                            
Query: 1529     gagtaccaggagctcatgaacaccaagctggccctggacgtggagatcgccacctacagg 1588
                ||||||||||||||| | |||  |||| ||||||||||| | ||||||||||||||| ||
Sbjct: 15694018 gagtaccaggagctcctcaacgtcaagatggccctggacatcgagatcgccacctaccgg 15694077

                                     
Query: 1589     aagctgctggagggcgaggag 1609
                |||||||||||||||||||||
Sbjct: 15694078 aagctgctggagggcgaggag 15694098



 Score = 97.6 bits (49), Expect = 2e-17
 Identities = 121/145 (83%)
 Strand = Plus / Minus

                                                                            
Query: 1465     caagctggccgagctggaggatgccctgcagaaggccaagcaggacatggcccggctgct 1524
                ||||||||| || |||||||  |||||||||||||||| ||||||||||||| | ||| |
Sbjct: 18047609 caagctggcggacctggaggccgccctgcagaaggccaggcaggacatggcctgcctggt 18047550

                                                                            
Query: 1525     gagggagtaccaggagctcatgaacaccaagctggccctggacgtggagatcgccaccta 1584
                 | ||||||||||||| |  ||||| ||||||||| |||| | ||||||||||| || ||
Sbjct: 18047549 caaggagtaccaggaggtgctgaactccaagctgggcctgcatgtggagatcgctactta 18047490

                                         
Query: 1585     caggaagctgctggagggcgaggag 1609
                | | || || |||||||| ||||||
Sbjct: 18047489 ccgcaaactcctggagggtgaggag 18047465



 Score = 97.6 bits (49), Expect = 2e-17
 Identities = 182/225 (80%), Gaps = 6/225 (2%)
 Strand = Plus / Minus

                                                                            
Query: 729      aggtgcggttcctggagcagcagaacaaggtcctggacaccaagtggaccctgctgcagg 788
                ||||||||||||||||||||||||| ||||| ||||| |||||||||   ||||||||||
Sbjct: 18610813 aggtgcggttcctggagcagcagaataaggtgctggagaccaagtgggtgctgctgcagg 18610754

                                                                            
Query: 789      agcagggcaccaagac---tgtc---aggcagaacctggagcctttgttcgagcagtaca 842
                ||||||||   ||| |   ||||   ||| | || ||||||||  | |||||| | ||||
Sbjct: 18610753 agcagggccagaagtcgggtgtcactaggaaaaatctggagcccctcttcgagaactaca 18610694

                                                                            
Query: 843      tcaacaacctcaggagacagctggacagcatcctgggggagagaggccgcctggactcag 902
                ||| ||||||  | |  |||||||||||| ||| | | ||| | ||  | |||||||| |
Sbjct: 18610693 tcagcaacctgcgcatgcagctggacagcctccagagtgagcgggggaggctggactctg 18610634

                                                             
Query: 903      agctgaggaacatgcaggacctggtggaggacttcaagaacaagt 947
                | |||||||||||||||||||| || |||||||||||||||||||
Sbjct: 18610633 aactgaggaacatgcaggacctcgttgaggacttcaagaacaagt 18610589



 Score = 93.7 bits (47), Expect = 3e-16
 Identities = 56/59 (94%)
 Strand = Plus / Minus

                                                                           
Query: 675      aggagcgggagcagatcaagaccctcaacaacaagttcgcctccttcatcgacaaggtg 733
                ||||||||||||||||||||||||||||| ||||||||||||||||||| || ||||||
Sbjct: 18548728 aggagcgggagcagatcaagaccctcaacgacaagttcgcctccttcattgataaggtg 18548670



 Score = 89.7 bits (45), Expect = 5e-15
 Identities = 120/145 (82%)
 Strand = Plus / Minus

                                                                            
Query: 1465     caagctggccgagctggaggatgccctgcagaaggccaagcaggacatggcccggctgct 1524
                ||||||||||  ||||||||  ||| |||||  |||||||||||||||||  |||| |||
Sbjct: 18124095 caagctggcctggctggaggccgccttgcagcgggccaagcaggacatggtgcggcagct 18124036

                                                                            
Query: 1525     gagggagtaccaggagctcatgaacaccaagctggccctggacgtggagatcgccaccta 1584
                | | |||||||||||||||||||    || ||||| ||||||  | ||||||||||| ||
Sbjct: 18124035 gcgtgagtaccaggagctcatgattgtcaggctgggcctggattttgagatcgccactta 18123976

                                         
Query: 1585     caggaagctgctggagggcgaggag 1609
                | | |||||||||||| ||||||||
Sbjct: 18123975 ccgcaagctgctggagagcgaggag 18123951



 Score = 89.7 bits (45), Expect = 5e-15
 Identities = 81/93 (87%)
 Strand = Plus / Minus

                                                                            
Query: 1133     gacacatctgtggtcctctctatggacaacaaccgcaacctggacctggacagcatcatc 1192
                |||||||| ||  ||||||| ||||||||||| || | ||||||||||||||||||||| 
Sbjct: 18446565 gacacatccgtcatcctctccatggacaacaatcggagcctggacctggacagcatcatt 18446506

                                                 
Query: 1193     gccgaggtcaaggcccagtacgaggacatcgcc 1225
                || |||||| | |||||||||||||| ||||||
Sbjct: 18446505 gcggaggtccaagcccagtacgaggagatcgcc 18446473



 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 92/108 (85%)
 Strand = Plus / Plus

                                                                            
Query: 1286     acagctggccggcatggtgatgatctccgcaacaccaagcatgagatctctgaaatgaac 1345
                ||||| ||| |||| || ||||| || |||||||||||||| |||||||| || || |||
Sbjct: 18185973 acagcgggcaggcacggagatgacctgcgcaacaccaagcaggagatctccgagatcaac 18186032

                                                                
Query: 1346     aggatgatccagaggctgagagctgagatcgacaacgtcaagaagcag 1393
                 | ||||||||||||||| |  ||||||||||| ||||||||||||||
Sbjct: 18186033 cgcatgatccagaggctgcggtctgagatcgaccacgtcaagaagcag 18186080



 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 92/108 (85%)
 Strand = Plus / Plus

                                                                            
Query: 1286     acagctggccggcatggtgatgatctccgcaacaccaagcatgagatctctgaaatgaac 1345
                ||||| ||| |||| || ||||| || |||||||||||||| |||||||| || || |||
Sbjct: 18203707 acagcgggcaggcacggagatgacctgcgcaacaccaagcaggagatctccgagatcaac 18203766

                                                                
Query: 1346     aggatgatccagaggctgagagctgagatcgacaacgtcaagaagcag 1393
                 | ||||||||||||||| |  ||||||||||| ||||||||||||||
Sbjct: 18203767 cgcatgatccagaggctgcggtctgagatcgaccacgtcaagaagcag 18203814



 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 65/72 (90%)
 Strand = Plus / Minus

                                                                            
Query: 1154     atggacaacaaccgcaacctggacctggacagcatcatcgccgaggtcaaggcccagtac 1213
                ||||||||||||||  |||||||||||||||||||||| |||||||||   |||||||| 
Sbjct: 18413361 atggacaacaaccgggacctggacctggacagcatcattgccgaggtccgcgcccagtat 18413302

                            
Query: 1214     gaggacatcgcc 1225
                ||||||||||||
Sbjct: 18413301 gaggacatcgcc 18413290



 Score = 85.7 bits (43), Expect = 8e-14
 Identities = 55/59 (93%)
 Strand = Plus / Minus

                                                                           
Query: 675      aggagcgggagcagatcaagaccctcaacaacaagttcgcctccttcatcgacaaggtg 733
                |||||||||||||||||||| | || ||||||||||| |||||||||||||||||||||
Sbjct: 18416097 aggagcgggagcagatcaaggcactgaacaacaagtttgcctccttcatcgacaaggtg 18416039



 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 62/69 (89%)
 Strand = Plus / Minus

                                                                            
Query: 1154     atggacaacaaccgcaacctggacctggacagcatcatcgccgaggtcaaggcccagtac 1213
                ||||||||||||||  ||||||||||||||||||||||||| ||||||   |||||||| 
Sbjct: 18389375 atggacaacaaccgggacctggacctggacagcatcatcgctgaggtccgtgcccagtat 18389316

                         
Query: 1214     gaggacatc 1222
                |||||||||
Sbjct: 18389315 gaggacatc 18389307



 Score = 79.8 bits (40), Expect = 5e-12
 Identities = 58/64 (90%)
 Strand = Plus / Minus

                                                                            
Query: 729      aggtgcggttcctggagcagcagaacaaggtcctggacaccaagtggaccctgctgcagg 788
                ||||||||||||||||||||||||| ||||||||||| || ||||||| |||  ||||||
Sbjct: 18091097 aggtgcggttcctggagcagcagaataaggtcctggagacaaagtggagcctcttgcagg 18091038

                    
Query: 789      agca 792
                ||||
Sbjct: 18091037 agca 18091034



 Score = 79.8 bits (40), Expect = 5e-12
 Identities = 58/64 (90%)
 Strand = Plus / Minus

                                                                            
Query: 729      aggtgcggttcctggagcagcagaacaaggtcctggacaccaagtggaccctgctgcagg 788
                ||||||||||||||||||||||||| ||||||||||| || ||||||| |||  ||||||
Sbjct: 18270422 aggtgcggttcctggagcagcagaataaggtcctggagacaaagtggagcctcttgcagg 18270363

                    
Query: 789      agca 792
                ||||
Sbjct: 18270362 agca 18270359



 Score = 79.8 bits (40), Expect = 5e-12
 Identities = 58/64 (90%)
 Strand = Plus / Minus

                                                                            
Query: 1146     tcctctctatggacaacaaccgcaacctggacctggacagcatcatcgccgaggtcaagg 1205
                ||||||| ||||||||||||||| ||||||||||| |||||||||||| ||| ||||| |
Sbjct: 18508825 tcctctccatggacaacaaccgccacctggacctgaacagcatcatcgacgaagtcaaag 18508766

                    
Query: 1206     ccca 1209
                ||||
Sbjct: 18508765 ccca 18508762



 Score = 79.8 bits (40), Expect = 5e-12
 Identities = 49/52 (94%)
 Strand = Plus / Minus

                                                                    
Query: 682      ggagcagatcaagaccctcaacaacaagttcgcctccttcatcgacaaggtg 733
                ||||||||||||||| |||||||| ||||| |||||||||||||||||||||
Sbjct: 18670832 ggagcagatcaagactctcaacaataagtttgcctccttcatcgacaaggtg 18670781



 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 54/59 (91%)
 Strand = Plus / Minus

                                                                           
Query: 675      aggagcgggagcagatcaagaccctcaacaacaagttcgcctccttcatcgacaaggtg 733
                |||||||||||||||||||| | || ||||| |||||||| ||||||||||||||||||
Sbjct: 18432621 aggagcgggagcagatcaaggcgctgaacaataagttcgcttccttcatcgacaaggtg 18432563



 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 54/59 (91%)
 Strand = Plus / Minus

                                                                           
Query: 675      aggagcgggagcagatcaagaccctcaacaacaagttcgcctccttcatcgacaaggtg 733
                ||||| |||||||||||||| | || ||||||||||| |||||||||||||||||||||
Sbjct: 18450729 aggagtgggagcagatcaaggcactgaacaacaagtttgcctccttcatcgacaaggtg 18450671



 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 54/59 (91%)
 Strand = Plus / Minus

                                                                           
Query: 675      aggagcgggagcagatcaagaccctcaacaacaagttcgcctccttcatcgacaaggtg 733
                ||||||||||||||||||| || ||||||||||| || |||| ||||||||||||||||
Sbjct: 18484784 aggagcgggagcagatcaaaactctcaacaacaaatttgcctgcttcatcgacaaggtg 18484726



 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 67/77 (87%)
 Strand = Plus / Minus

                                                                            
Query: 1005     aggatgtggacgccgcctacatgaacaaggtggagctggaagccaaggtcgatgcactga 1064
                |||||||||| || ||||||||||||||| |||||||||| ||||||||| |  | ||||
Sbjct: 18282822 aggatgtggatgctgcctacatgaacaagatggagctggaggccaaggtcaactctctga 18282763

                                 
Query: 1065     tggatgagatcaacttc 1081
                  |||||||||||||||
Sbjct: 18282762 ctgatgagatcaacttc 18282746



 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 52/57 (91%)
 Strand = Plus / Minus

                                                                         
Query: 1145     gtcctctctatggacaacaaccgcaacctggacctggacagcatcatcgccgaggtc 1201
                ||||| || ||||||||||||||  ||||||||||||||||||||||||| ||||||
Sbjct: 18544548 gtcctgtccatggacaacaaccgggacctggacctggacagcatcatcgctgaggtc 18544492



 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 67/77 (87%)
 Strand = Plus / Minus

                                                                            
Query: 1005     aggatgtggacgccgcctacatgaacaaggtggagctggaagccaaggtcgatgcactga 1064
                |||||||||| || ||||||||||||||||||||| |||| |||||||| ||||  || |
Sbjct: 18588213 aggatgtggatgctgcctacatgaacaaggtggagttggaggccaaggtggatggcctta 18588154

                                 
Query: 1065     tggatgagatcaacttc 1081
                  |||||||||||||||
Sbjct: 18588153 atgatgagatcaacttc 18588137



 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 63/72 (87%)
 Strand = Plus / Minus

                                                                            
Query: 1154     atggacaacaaccgcaacctggacctggacagcatcatcgccgaggtcaaggcccagtac 1213
                ||||||||||||||  ||||| || ||||||||||||||| |||||||   |||||||||
Sbjct: 18482219 atggacaacaaccgtgacctgaacttggacagcatcatcgacgaggtccgtgcccagtac 18482160

                            
Query: 1214     gaggacatcgcc 1225
                ||||| ||||||
Sbjct: 18482159 gaggagatcgcc 18482148



 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 44/47 (93%)
 Strand = Plus / Minus

                                                               
Query: 901      agagctgaggaacatgcaggacctggtggaggacttcaagaacaagt 947
                |||||||| || |||||||||| ||||||||||||||||||||||||
Sbjct: 18090931 agagctgaagagcatgcaggacgtggtggaggacttcaagaacaagt 18090885



 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 44/47 (93%)
 Strand = Plus / Minus

                                                               
Query: 901      agagctgaggaacatgcaggacctggtggaggacttcaagaacaagt 947
                |||||||| || |||||||||| ||||||||||||||||||||||||
Sbjct: 18270256 agagctgaagagcatgcaggacgtggtggaggacttcaagaacaagt 18270210



 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 35/35 (100%)
 Strand = Plus / Plus

                                                   
Query: 1615     attgagtggagaaggtgttggaccagtcaatatct 1649
                |||||||||||||||||||||||||||||||||||
Sbjct: 18370974 attgagtggagaaggtgttggaccagtcaatatct 18371008



 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 44/47 (93%)
 Strand = Plus / Minus

                                                               
Query: 729      aggtgcggttcctggagcagcagaacaaggtcctggacaccaagtgg 775
                |||||||||||||||||||||||||| |||| ||||| |||||||||
Sbjct: 18395118 aggtgcggttcctggagcagcagaaccaggtgctggagaccaagtgg 18395072



 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 53/59 (89%)
 Strand = Plus / Minus

                                                                           
Query: 675      aggagcgggagcagatcaagaccctcaacaacaagttcgcctccttcatcgacaaggtg 733
                |||||||||||||||||||| | || ||||||||||| |||||||| || |||||||||
Sbjct: 18397288 aggagcgggagcagatcaaggcactgaacaacaagtttgcctcctttattgacaaggtg 18397230



 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 44/47 (93%)
 Strand = Plus / Minus

                                                               
Query: 729      aggtgcggttcctggagcagcagaacaaggtcctggacaccaagtgg 775
                |||||||||||||||||||||||||| |||| ||||| |||||||||
Sbjct: 18449183 aggtgcggttcctggagcagcagaaccaggtgctggagaccaagtgg 18449137



 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 76/90 (84%)
 Strand = Plus / Plus

                                                                            
Query: 1172     ctggacctggacagcatcatcgccgaggtcaaggcccagtacgaggacatcgccaaccgc 1231
                |||||| ||||  ||||||| |||||| |||||||||||||||| || ||||||| ||||
Sbjct: 18171488 ctggacgtggatggcatcattgccgagatcaaggcccagtacgacgaaatcgccagccgc 18171547

                                              
Query: 1232     agccgcacggaagccgagtcctggtaccag 1261
                |||    ||||||| ||| |||||||||||
Sbjct: 18171548 agcaaagcggaagcagaggcctggtaccag 18171577



 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 76/90 (84%)
 Strand = Plus / Minus

                                                                            
Query: 1172     ctggacctggacagcatcatcgccgaggtcaaggcccagtacgaggacatcgccaaccgc 1231
                |||||| ||||  ||||||| |||||| |||||||||||||||| || ||||||| ||||
Sbjct: 18250360 ctggacgtggatggcatcattgccgagatcaaggcccagtacgacgaaatcgccagccgc 18250301

                                              
Query: 1232     agccgcacggaagccgagtcctggtaccag 1261
                |||    ||||||| ||| |||||||||||
Sbjct: 18250300 agcaaagcggaagcagaggcctggtaccag 18250271



 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 67/78 (85%)
 Strand = Plus / Minus

                                                                            
Query: 1316     aacaccaagcatgagatctctgaaatgaacaggatgatccagaggctgagagctgagatc 1375
                ||||||||| ||||||| || ||  | ||||||||||||||||||||| | |||||||| 
Sbjct: 18586951 aacaccaagaatgagatttcagagcttaacaggatgatccagaggctgcgggctgagatt 18586892

                                  
Query: 1376     gacaacgtcaagaagcag 1393
                || ||| |||||||||||
Sbjct: 18586891 gaaaacatcaagaagcag 18586874



 Score = 65.9 bits (33), Expect = 7e-08
 Identities = 48/53 (90%)
 Strand = Plus / Minus

                                                                     
Query: 681      gggagcagatcaagaccctcaacaacaagttcgcctccttcatcgacaaggtg 733
                ||||||| |||||| ||||||||||| | ||||| ||||||||||||||||||
Sbjct: 18511231 gggagcaaatcaagtccctcaacaaccaattcgcatccttcatcgacaaggtg 18511179



 Score = 65.9 bits (33), Expect = 7e-08
 Identities = 36/37 (97%)
 Strand = Plus / Minus

                                                     
Query: 911      aacatgcaggacctggtggaggacttcaagaacaagt 947
                |||||||||| ||||||||||||||||||||||||||
Sbjct: 18667874 aacatgcagggcctggtggaggacttcaagaacaagt 18667838



 Score = 65.9 bits (33), Expect = 7e-08
 Identities = 57/65 (87%)
 Strand = Plus / Minus

                                                                            
Query: 729      aggtgcggttcctggagcagcagaacaaggtcctggacaccaagtggaccctgctgcagg 788
                ||||||||  ||||||||||||||||||||| ||||| ||||| |||| ||| |||||| 
Sbjct: 18668050 aggtgcggcacctggagcagcagaacaaggttctggagaccaaatggaacctcctgcagc 18667991

                     
Query: 789      agcag 793
                |||||
Sbjct: 18667990 agcag 18667986



 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 43/47 (91%)
 Strand = Plus / Minus

                                                               
Query: 729      aggtgcggttcctggagcagcagaacaaggtcctggacaccaagtgg 775
                ||||| |||||||||||||||||||| |||| ||||| |||||||||
Sbjct: 18415422 aggtgaggttcctggagcagcagaaccaggtactggagaccaagtgg 18415376



 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 45/50 (90%)
 Strand = Plus / Plus

                                                                  
Query: 683      gagcagatcaagaccctcaacaacaagttcgcctccttcatcgacaaggt 732
                ||||| |||||||||||||||||||| || || ||||| |||||||||||
Sbjct: 18008921 gagcaaatcaagaccctcaacaacaaatttgcttcctttatcgacaaggt 18008970



 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 54/62 (87%)
 Strand = Plus / Plus

                                                                            
Query: 946      gtatgaagatgaaatcaacaagcgtaccacagccgagaatgaatttgtgatgctgaagaa 1005
                ||||||||| || ||||||||||| ||  | |||||||||||||||||||  ||||||||
Sbjct: 18202612 gtatgaagacgagatcaacaagcgcacagcggccgagaatgaatttgtgaatctgaagaa 18202671

                  
Query: 1006     gg 1007
                ||
Sbjct: 18202672 gg 18202673



 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 45/50 (90%)
 Strand = Plus / Plus

                                                                  
Query: 683      gagcagatcaagaccctcaacaacaagttcgcctccttcatcgacaaggt 732
                ||||| |||||||||||||||||||| || || ||||| |||||||||||
Sbjct: 18330927 gagcaaatcaagaccctcaacaacaaatttgcttcctttatcgacaaggt 18330976



 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 45/50 (90%)
 Strand = Plus / Minus

                                                                  
Query: 893      ctggactcagagctgaggaacatgcaggacctggtggaggacttcaagaa 942
                |||||||| |||||||  | ||||||||||||||||||||||| ||||||
Sbjct: 18415258 ctggactcggagctgaaaatcatgcaggacctggtggaggactacaagaa 18415209



 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 45/50 (90%)
 Strand = Plus / Minus

                                                                  
Query: 893      ctggactcagagctgaggaacatgcaggacctggtggaggacttcaagaa 942
                ||||||||||||||||||| || || |||| |||||||||||| ||||||
Sbjct: 18449019 ctggactcagagctgaggagcacgcgggacatggtggaggactacaagaa 18448970



 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                      
Query: 680      cgggagcagatcaagaccctcaacaacaagttcgcctccttcatcgacaaggtg 733
                ||||||||||||| |   |||||||||||||| ||||||||||| |||||||||
Sbjct: 18531906 cgggagcagatcatggttctcaacaacaagtttgcctccttcattgacaaggtg 18531853


>gb|GL896034.1| Sus scrofa unplaced genomic scaffold chrU_scaffold454
          Length = 1833

 Score =  115 bits (58), Expect = 9e-23
 Identities = 82/90 (91%)
 Strand = Plus / Plus

                                                                       
Query: 644 atcgaccccaccatccagcgggtgaggaccgaggagcgggagcagatcaagaccctcaac 703
           ||||||||| ||||||||| |||| |    ||||||||||||||||||||||||||||||
Sbjct: 299 atcgacccctccatccagcaggtgcgccaggaggagcgggagcagatcaagaccctcaac 358

                                         
Query: 704 aacaagttcgcctccttcatcgacaaggtg 733
           |||||||||||||| |||||||||||||||
Sbjct: 359 aacaagttcgcctcgttcatcgacaaggtg 388


>Sscrofa_Chr12 
||          Length = 63588571

 Score = 99.6 bits (50), Expect = 5e-18
 Identities = 74/82 (90%)
 Strand = Plus / Plus

                                                                            
Query: 1528     ggagtaccaggagctcatgaacaccaagctggccctggacgtggagatcgccacctacag 1587
                |||||||||||||||  | |||   ||||||||||||||| | |||||||||||||||||
Sbjct: 18705893 ggagtaccaggagctgctcaacgttaagctggccctggacatcgagatcgccacctacag 18705952

                                      
Query: 1588     gaagctgctggagggcgaggag 1609
                ||||||||||||||||||||||
Sbjct: 18705953 gaagctgctggagggcgaggag 18705974


>Sscrofa_Chr15 
||          Length = 157681621

 Score = 83.8 bits (42), Expect = 3e-13
 Identities = 54/58 (93%)
 Strand = Plus / Plus

                                                                           
Query: 1552      caagctggccctggacgtggagatcgccacctacaggaagctgctggagggcgaggag 1609
                 |||| |||||||||| |||||||| ||||||||| |||||||||||||||||||||||
Sbjct: 134563417 caagatggccctggatgtggagattgccacctaccggaagctgctggagggcgaggag 134563474


>Sscrofa_Chr04 
||          Length = 143465943

 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 70/81 (86%)
 Strand = Plus / Minus

                                                                             
Query: 1529      gagtaccaggagctcatgaacaccaagctggccctggacgtggagatcgccacctacagg 1588
                 ||||||||||||||  || ||| |||||||||||||||| ||||||||  | ||||| | 
Sbjct: 102645419 gagtaccaggagctgctggacatcaagctggccctggacatggagatccacgcctaccgc 102645360

                                      
Query: 1589      aagctgctggagggcgaggag 1609
                 ||||| |||||||||||||||
Sbjct: 102645359 aagctcctggagggcgaggag 102645339


>Sscrofa_Chr10 
||          Length = 79102373

 Score = 65.9 bits (33), Expect = 7e-08
 Identities = 36/37 (97%)
 Strand = Plus / Plus

                                                     
Query: 721      catcgacaaggtgcggttcctggagcagcagaacaag 757
                ||||||||||||||| |||||||||||||||||||||
Sbjct: 48227499 catcgacaaggtgcgcttcctggagcagcagaacaag 48227535


  Database: Sscrofa_10.2.fasta
    Posted date:  Nov 16, 2011 10:34 AM
  Number of letters in database: 2,808,509,378
  Number of sequences in database:  4582
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 42,492,204
Number of extensions: 424
Number of successful extensions: 424
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 419
Number of HSP's successfully gapped: 106
Length of query: 1830
Length of database: 2,808,509,378
Length adjustment: 22
Effective length of query: 1808
Effective length of database: 2,808,408,574
Effective search space: 5077602701792
Effective search space used: 5077602701792
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)