Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007367
(1054 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001070018.1| complement C1s subcomponent [Bos taurus]. 409 e-122
Alignment gi|NP_001070436.1| mannan-binding lectin serine protease 1 [Bos... 192 4e-49
Alignment gi|NP_001179001.1| mannan-binding lectin serine protease 2 [Bos... 173 2e-43
Alignment gi|XP_002694103.1| PREDICTED: mannan-binding lectin serine pept... 173 2e-43
Alignment gi|NP_001029579.1| complement component 1, r subcomponent [Bos ... 164 9e-41
Alignment gi|XP_584365.5| PREDICTED: complement component 1, r subcompone... 159 5e-39
Alignment gi|XP_002687923.1| PREDICTED: complement component 1, r subcomp... 156 3e-38
Alignment gi|XP_002698454.1| PREDICTED: tolloid-like 2-like [Bos taurus]. 103 2e-22
Alignment gi|XP_869787.2| PREDICTED: tolloid-like 2-like isoform 2 [Bos t... 103 2e-22
Alignment gi|NP_001180043.1| tolloid-like 1 [Bos taurus]. 94 3e-19
>ref|NP_001070018.1| complement C1s subcomponent [Bos taurus].
Length = 695
Score = 409 bits (1051), Expect(2) = e-122
Identities = 188/232 (81%), Positives = 207/232 (89%)
Frame = +3
Query: 276 MDKLPGMWCIVLLSLLAWVDAEPTMYGEILSPNYPQAYPNEVEKSWDIEVPEGYGIHLYF 455
M+KLP MWCIVL SL+AWV AEPTMYGEILSPNYPQ YPNEVEKSWDIEVP GYGIHLYF
Sbjct: 1 MNKLPEMWCIVLFSLVAWVYAEPTMYGEILSPNYPQVYPNEVEKSWDIEVPAGYGIHLYF 60
Query: 456 THLDIELSENCAYDSVQIKSGGREEGKLCGQKTSKNPKSAVVEEFQVPYNKLQVIFTSDF 635
THLDIELSENC+YDSVQI SGG EEGKLCG++T+KN S VV+EF +PY+KLQVIF SDF
Sbjct: 61 THLDIELSENCSYDSVQIMSGGHEEGKLCGRRTNKNSNSPVVKEFHIPYSKLQVIFRSDF 120
Query: 636 SNEERFTGFAAYYVAVDVNECTDFADSPCSHFCNNYIGGYFCSCPPEYFLHEDKKNCGVN 815
SNEERFTGFAAYYVA D++ECT FAD+PCSHFCNN++GGYFCSCPPEYFLHEDKKNCGVN
Sbjct: 121 SNEERFTGFAAYYVAEDIDECTAFADAPCSHFCNNFLGGYFCSCPPEYFLHEDKKNCGVN 180
Query: 816 CSGDVFTTLIGEVASXXXXXXXXENSRCDYQILLEEGFQVVVTMRRKDFDVE 971
CSG+VFTT+ GEV S E+SRCDYQI LEEGF+VVVTMRR+DFDVE
Sbjct: 181 CSGNVFTTMTGEVESPNYPSPYPESSRCDYQIQLEEGFRVVVTMRREDFDVE 232
Score = 49.3 bits (116), Expect(2) = e-122
Identities = 20/27 (74%), Positives = 22/27 (81%)
Frame = +2
Query: 974 AKSGGHCPDSLIFVAGNPQFGSYCGNG 1054
A S GHCPDSL+FVAG+ FG YCGNG
Sbjct: 234 ADSEGHCPDSLLFVAGDQHFGPYCGNG 260
>ref|NP_001070436.1| mannan-binding lectin serine protease 1 [Bos taurus].
Length = 728
Score = 192 bits (488), Expect = 4e-49
Identities = 97/227 (42%), Positives = 140/227 (61%), Gaps = 3/227 (1%)
Frame = +3
Query: 300 CIVLLSLLAWVDAEPTMYGEILSPNYPQAYPNEVEKSWDIEVPEGYGIHLYFTHLDIELS 479
C LL A + M+G+I SP YP AYP++ E +W+I VPEG+ I LYF H ++E S
Sbjct: 11 CFSLLKASAHIVELNNMFGQIQSPGYPDAYPSDSEVTWNITVPEGFRIKLYFMHFNLESS 70
Query: 480 ENCAYDSVQIKSGGREEGKLCGQKTSKNPKSAVVEEFQVPYNKLQVIFTSDFSNEERFTG 659
C YD V++++ + CG++T+ ++ E P + + + F SDFS+EERFTG
Sbjct: 71 YLCEYDYVKVETEDQVLATFCGRETTDTEQTPGQEVVLSPGSFMSITFRSDFSDEERFTG 130
Query: 660 FAAYYVAVDVNECTDFADS--PCSHFCNNYIGGYFCSCPPEYFLHEDKKNCGVNCSGDVF 833
F A+YVAVDV+ECT+ D C H+C+NYIGGY+CSC Y LH D + C V CS ++F
Sbjct: 131 FDAHYVAVDVDECTEREDEELSCDHYCHNYIGGYYCSCRFGYILHTDNRTCRVECSDNLF 190
Query: 834 TTLIGEVASXXXXXXXXENSRCDYQILLEEGFQVVVTMRRKD-FDVE 971
T G + S ++S C Y I LEEGF +++++ +D FD+E
Sbjct: 191 TQRTGVITSPDFPSPYPKSSECLYTIELEEGF--MISLQFEDIFDIE 235
Score = 60.5 bits (145), Expect = 2e-09
Identities = 42/118 (35%), Positives = 59/118 (50%), Gaps = 3/118 (2%)
Frame = +3
Query: 354 GEILSPNYPQAYPNEVEKSWDIEVPEGYGIHLYFTHL-DIE--LSENCAYDSVQIKSGGR 524
G I SP++P YP E + IE+ EG+ I L F + DIE +C YD ++IK+G +
Sbjct: 195 GVITSPDFPSPYPKSSECLYTIELEEGFMISLQFEDIFDIEDHPEVSCPYDYIKIKAGPK 254
Query: 525 EEGKLCGQKTSKNPKSAVVEEFQVPYNKLQVIFTSDFSNEERFTGFAAYYVAVDVNEC 698
G CG+K E + +Q++F SD S E R G+ Y A NEC
Sbjct: 255 VLGPFCGEKAP--------EPINTQSHSIQILFRSDNSGENR--GWRLSYRATG-NEC 301
>ref|NP_001179001.1| mannan-binding lectin serine protease 2 [Bos taurus].
Length = 686
Score = 173 bits (439), Expect = 2e-43
Identities = 84/210 (40%), Positives = 123/210 (58%), Gaps = 2/210 (0%)
Frame = +3
Query: 348 MYGEILSPNYPQAYPNEVEKSWDIEVPEGYGIHLYFTHLDIELSENCAYDSVQIKSGGRE 527
++G + SP +P Y N E+ W + P GY + LYFTH +E S C YD V++ +G +E
Sbjct: 26 VFGRLASPGFPDKYANNQERRWALTAPPGYRLRLYFTHFQLEPSYLCEYDFVKLSAGTKE 85
Query: 528 EGKLCGQKTSKNPKSAVVEEFQVPYNKLQVIFTSDFSNEERFTGFAAYYVAVDVNEC-TD 704
LCG +++ ++ + F P + L V F SD+SNE+ FTGF A+Y A D++EC
Sbjct: 86 LATLCGSESTDTERAPGNDTFYSPGSSLDVTFRSDYSNEKPFTGFEAFYSAEDIDECQVP 145
Query: 705 FADSP-CSHFCNNYIGGYFCSCPPEYFLHEDKKNCGVNCSGDVFTTLIGEVASXXXXXXX 881
++P C H C+N++GG++CSC Y LH +K+ C CS VFT GE++S
Sbjct: 146 PGEAPTCDHHCHNHLGGFYCSCRVGYVLHRNKRTCSALCSDQVFTARSGELSSPEYPQPY 205
Query: 882 XENSRCDYQILLEEGFQVVVTMRRKDFDVE 971
+ S C Y I LEEGF V++ + FDVE
Sbjct: 206 PKLSSCTYSIHLEEGFHVILDF-VESFDVE 234
Score = 50.4 bits (119), Expect = 3e-06
Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 3/100 (3%)
Frame = +3
Query: 354 GEILSPNYPQAYPNEVEKSWDIEVPEGYGIHLYFTH-LDIELSEN--CAYDSVQIKSGGR 524
GE+ SP YPQ YP ++ I + EG+ + L F D+E C YDS++I++
Sbjct: 194 GELSSPEYPQPYPKLSSCTYSIHLEEGFHVILDFVESFDVETHPETLCPYDSLKIRTDKA 253
Query: 525 EEGKLCGQKTSKNPKSAVVEEFQVPYNKLQVIFTSDFSNE 644
E G CG+ + + N + + FT+D S +
Sbjct: 254 EYGPFCGK--------TLPSRIETKSNTVTITFTTDQSGD 285
>ref|XP_002694103.1| PREDICTED: mannan-binding lectin serine peptidase 2 [Bos taurus].
Length = 441
Score = 173 bits (439), Expect = 2e-43
Identities = 84/210 (40%), Positives = 123/210 (58%), Gaps = 2/210 (0%)
Frame = +3
Query: 348 MYGEILSPNYPQAYPNEVEKSWDIEVPEGYGIHLYFTHLDIELSENCAYDSVQIKSGGRE 527
++G + SP +P Y N E+ W + P GY + LYFTH +E S C YD V++ +G +E
Sbjct: 26 VFGRLASPGFPDKYANNQERRWALTAPPGYRLRLYFTHFQLEPSYLCEYDFVKLSAGTKE 85
Query: 528 EGKLCGQKTSKNPKSAVVEEFQVPYNKLQVIFTSDFSNEERFTGFAAYYVAVDVNEC-TD 704
LCG +++ ++ + F P + L V F SD+SNE+ FTGF A+Y A D++EC
Sbjct: 86 LATLCGSESTDTERAPGNDTFYSPGSSLDVTFRSDYSNEKPFTGFEAFYSAEDIDECQVP 145
Query: 705 FADSP-CSHFCNNYIGGYFCSCPPEYFLHEDKKNCGVNCSGDVFTTLIGEVASXXXXXXX 881
++P C H C+N++GG++CSC Y LH +K+ C CS VFT GE++S
Sbjct: 146 PGEAPTCDHHCHNHLGGFYCSCRVGYVLHRNKRTCSALCSDQVFTARSGELSSPEYPQPY 205
Query: 882 XENSRCDYQILLEEGFQVVVTMRRKDFDVE 971
+ S C Y I LEEGF V++ + FDVE
Sbjct: 206 PKLSSCTYSIHLEEGFHVILDF-VESFDVE 234
Score = 50.4 bits (119), Expect = 3e-06
Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 3/100 (3%)
Frame = +3
Query: 354 GEILSPNYPQAYPNEVEKSWDIEVPEGYGIHLYFTH-LDIELSEN--CAYDSVQIKSGGR 524
GE+ SP YPQ YP ++ I + EG+ + L F D+E C YDS++I++
Sbjct: 194 GELSSPEYPQPYPKLSSCTYSIHLEEGFHVILDFVESFDVETHPETLCPYDSLKIRTDKA 253
Query: 525 EEGKLCGQKTSKNPKSAVVEEFQVPYNKLQVIFTSDFSNE 644
E G CG+ + + N + + FT+D S +
Sbjct: 254 EYGPFCGK--------TLPSRIETKSNTVTITFTTDQSGD 285
>ref|NP_001029579.1| complement component 1, r subcomponent [Bos taurus].
Length = 394
Score = 164 bits (416), Expect = 9e-41
Identities = 90/229 (39%), Positives = 124/229 (54%), Gaps = 18/229 (7%)
Frame = +3
Query: 294 MWCIVLLSLLAWV---DAEPT---MYGEILSPNYPQAYPNEVEKSWDIEVPEGYGIHLYF 455
MW + LL + + A PT +YGE++SP +P+ YPN E++ I VP GY + L F
Sbjct: 1 MWLLYLLLPVLFYRVGGATPTPQKLYGEVMSPLFPKPYPNNFERTTVITVPTGYKVKLVF 60
Query: 456 THLDIELSENCAYDSVQIKSGGREEGKLCGQKTSKNPKSAVVEEFQVPYNKLQVIFTSDF 635
D+E SE C YD V+I + + G+ CGQ S +EF NK+ + F SDF
Sbjct: 61 WQFDLEPSEGCLYDYVKISADKKTMGRFCGQLGSPLSNPPGRKEFMSQGNKMLLTFHSDF 120
Query: 636 SNEER-----FTGFAAYYVAVDVNECT-------DFADSPCSHFCNNYIGGYFCSCPPEY 779
SNEE + GF AYY AVDV+EC + + C H C+NY+GGYFCSC P Y
Sbjct: 121 SNEENGTIMFYKGFLAYYQAVDVDECALQLNSVEEDPPAGCQHLCHNYVGGYFCSCRPGY 180
Query: 780 FLHEDKKNCGVNCSGDVFTTLIGEVASXXXXXXXXENSRCDYQILLEEG 926
L D ++C CS ++FT G ++S + RC+Y I +E G
Sbjct: 181 ELQPDGRSCQAECSSELFTEPSGYISSLEYPRPYPPDLRCNYSIRVERG 229
Score = 57.8 bits (138), Expect = 2e-08
Identities = 44/150 (29%), Positives = 71/150 (47%), Gaps = 4/150 (2%)
Frame = +3
Query: 261 SCSPGMDKLP-GMWCIVLLSLLAWVDAEPTMYGEILSPNYPQAYPNEVEKSWDIEVPEGY 437
SC PG + P G C S + + EP+ Y I S YP+ YP ++ ++ I V G+
Sbjct: 175 SCRPGYELQPDGRSCQAECS--SELFTEPSGY--ISSLEYPRPYPPDLRCNYSIRVERGH 230
Query: 438 GIHLYFT---HLDIELSENCAYDSVQIKSGGREEGKLCGQKTSKNPKSAVVEEFQVPYNK 608
+HL F +D +C YD +Q+ GR G+ CG++ E N
Sbjct: 231 TLHLQFLEPFEIDDHQQIHCPYDQLQVYVSGRNIGEFCGKQRP--------ERIDAQSNS 282
Query: 609 LQVIFTSDFSNEERFTGFAAYYVAVDVNEC 698
+ ++F +D S + R G+ YY + +V +C
Sbjct: 283 VDLLFFTDESGDSR--GWKLYYTS-EVIKC 309
>ref|XP_584365.5| PREDICTED: complement component 1, r subcomponent-like [Bos
taurus].
Length = 648
Score = 159 bits (401), Expect = 5e-39
Identities = 88/234 (37%), Positives = 125/234 (53%), Gaps = 18/234 (7%)
Frame = +3
Query: 279 DKLPGMWCIVLLSLLAWV---DAEPT---MYGEILSPNYPQAYPNEVEKSWDIEVPEGYG 440
D++ MW + LL + + A PT YGE++SP +P+ YPN E++ I VP GY
Sbjct: 40 DEIERMWLLHLLLPVLFYRVGGAIPTPQGFYGEVMSPLFPKPYPNNFERTTVITVPMGYR 99
Query: 441 IHLYFTHLDIELSENCAYDSVQIKSGGREEGKLCGQKTSKNPKSAVVEEFQVPYNKLQVI 620
+ L F D+E S+ C YD V+I + + G+ CGQ S +EF NK+ +
Sbjct: 100 VKLVFWQFDLEPSQGCFYDYVKISADKKTMGRFCGQLGSPLGNPPGRKEFMSQGNKMLLT 159
Query: 621 FTSDFSNEER-----FTGFAAYYVAVDVNECT-------DFADSPCSHFCNNYIGGYFCS 764
F SDFSNEE + GF AYY AVD++EC + + C H C+NY+G YFCS
Sbjct: 160 FHSDFSNEENGTIMFYKGFLAYYQAVDLDECALQLNSVEEDPPARCQHLCHNYVGSYFCS 219
Query: 765 CPPEYFLHEDKKNCGVNCSGDVFTTLIGEVASXXXXXXXXENSRCDYQILLEEG 926
C P Y L D ++C CS ++FT G ++S + RC+Y I +E G
Sbjct: 220 CRPGYELQPDGRSCQAECSSELFTEPSGYISSLEYPRPYPADLRCNYSIRVERG 273
Score = 56.2 bits (134), Expect = 5e-08
Identities = 52/193 (26%), Positives = 82/193 (42%), Gaps = 13/193 (6%)
Frame = +3
Query: 261 SCSPGMDKLP-GMWCIVLLSLLAWVDAEPTMYGEILSPNYPQAYPNEVEKSWDIEVPEGY 437
SC PG + P G C S + + EP+ Y I S YP+ YP ++ ++ I V G+
Sbjct: 219 SCRPGYELQPDGRSCQAECS--SELFTEPSGY--ISSLEYPRPYPADLRCNYSIRVERGH 274
Query: 438 GIHLYFT---HLDIELSENCAYDSVQIKSGGREEGKLCGQKTSKNPKSAVVEEFQVPYNK 608
+HL F +D +C YD ++I GR G+ CG++ E N
Sbjct: 275 TLHLQFLEPFEIDDHQQMHCPYDKLKIYVSGRNIGEFCGKQRP--------ERIDTQSNS 326
Query: 609 LQVIFTSDFSNEERFTGFAAYYVA--------VDVNECTDFAD-SPCSHFCNNYIGGYFC 761
+ ++F +D S + R G+ Y + ++ CT D P HF + +
Sbjct: 327 VDLLFFTDESGDSR--GWKLCYTSEVITCPQPKTLDSCTIIQDLQPLYHFKDRFT----A 380
Query: 762 SCPPEYFLHEDKK 800
+C Y L E K
Sbjct: 381 TCKEGYQLMEGNK 393
>ref|XP_002687923.1| PREDICTED: complement component 1, r subcomponent-like [Bos
taurus].
Length = 978
Score = 156 bits (394), Expect = 3e-38
Identities = 80/204 (39%), Positives = 112/204 (54%), Gaps = 12/204 (5%)
Frame = +3
Query: 351 YGEILSPNYPQAYPNEVEKSWDIEVPEGYGIHLYFTHLDIELSENCAYDSVQIKSGGREE 530
YGE++SP +P+ YPN E++ I VP GY + L F D+E S+ C YD V+I + +
Sbjct: 34 YGEVMSPLFPKPYPNNFERTTVITVPMGYRVKLVFWQFDLEPSQGCFYDYVKISADKKTM 93
Query: 531 GKLCGQKTSKNPKSAVVEEFQVPYNKLQVIFTSDFSNEER-----FTGFAAYYVAVDVNE 695
G+ CGQ S +EF NK+ + F SDFSNEE + GF AYY AVD++E
Sbjct: 94 GRFCGQLGSPLGNPPGRKEFMSQGNKMLLTFHSDFSNEENGTIMFYKGFLAYYQAVDLDE 153
Query: 696 CT-------DFADSPCSHFCNNYIGGYFCSCPPEYFLHEDKKNCGVNCSGDVFTTLIGEV 854
C + + C H C+NY+G YFCSC P Y L D ++C CS ++FT G +
Sbjct: 154 CALQLNSVEEDPPARCQHLCHNYVGSYFCSCRPGYELQPDGRSCQAECSSELFTEPSGYI 213
Query: 855 ASXXXXXXXXENSRCDYQILLEEG 926
+S + RC+Y I +E G
Sbjct: 214 SSLEYPRPYPADLRCNYSIRVERG 237
Score = 57.4 bits (137), Expect = 2e-08
Identities = 53/193 (27%), Positives = 82/193 (42%), Gaps = 13/193 (6%)
Frame = +3
Query: 261 SCSPGMDKLP-GMWCIVLLSLLAWVDAEPTMYGEILSPNYPQAYPNEVEKSWDIEVPEGY 437
SC PG + P G C S + + EP+ Y I S YP+ YP ++ ++ I V G+
Sbjct: 183 SCRPGYELQPDGRSCQAECS--SELFTEPSGY--ISSLEYPRPYPADLRCNYSIRVERGH 238
Query: 438 GIHLYFT---HLDIELSENCAYDSVQIKSGGREEGKLCGQKTSKNPKSAVVEEFQVPYNK 608
+HL F +D +C YD +QI GR G+ CG++ E N
Sbjct: 239 TLHLQFLEPFEIDDHQQIHCPYDQLQIYVSGRNIGEFCGKQRP--------ERIDTQSNS 290
Query: 609 LQVIFTSDFSNEERFTGFAAYYVA--------VDVNECTDFAD-SPCSHFCNNYIGGYFC 761
+ ++F +D S + R G+ Y + ++ CT D P HF + +
Sbjct: 291 VDLLFFTDESGDSR--GWKLCYTSEVITCPQPKTLDSCTIIQDLQPLYHFKDRFT----A 344
Query: 762 SCPPEYFLHEDKK 800
+C Y L E K
Sbjct: 345 TCKEGYQLMEGNK 357
>ref|XP_002698454.1| PREDICTED: tolloid-like 2-like [Bos taurus].
Length = 1020
Score = 103 bits (258), Expect = 2e-22
Identities = 67/198 (33%), Positives = 96/198 (48%), Gaps = 4/198 (2%)
Frame = +3
Query: 354 GEILSPNYPQAYPNEVEKSWDIEVPEGYGIHLYFTHLDIELSENCAYDSVQIKSGGREE- 530
G+I SPNYP Y E W I V EGY + L F +IE ++CAYD ++I+ G E+
Sbjct: 478 GQIQSPNYPDDYRPSKECVWRITVSEGYHVGLTFQAFEIERHDSCAYDYLEIRDGFTEDS 537
Query: 531 ---GKLCGQKTSKNPKSAVVEEFQVPYNKLQVIFTSDFSNEERFTGFAAYYVAVDVNECT 701
G CG + + KS+ N++ + F SD S + GFAA + +V+EC+
Sbjct: 538 ALIGHFCGYEKPDDVKSS--------SNRMWMKFVSDGSINK--AGFAANFFK-EVDECS 586
Query: 702 DFADSPCSHFCNNYIGGYFCSCPPEYFLHEDKKNCGVNCSGDVFTTLIGEVASXXXXXXX 881
C C N +G Y C C P Y L DKK C V C G + T L G + S
Sbjct: 587 WPDHGGCEQRCMNTLGSYKCMCDPGYELAADKKACEVACGGFI-TKLNGTITSPGWPKEY 645
Query: 882 XENSRCDYQILLEEGFQV 935
N C +Q++ +++
Sbjct: 646 PTNKNCVWQVVAPAQYRI 663
Score = 90.9 bits (224), Expect = 2e-18
Identities = 63/216 (29%), Positives = 96/216 (44%), Gaps = 4/216 (1%)
Frame = +3
Query: 354 GEILSPNYPQAYPNEVEKSWDIEVPEGYGIHLYFTHLDIELSENCAYDSVQIKSG----G 521
G I SP +P+ YP W + P Y I L F ++E ++ C YD V+++SG
Sbjct: 634 GTITSPGWPKEYPTNKNCVWQVVAPAQYRISLQFEVFELEGNDVCKYDFVEVRSGLSPDA 693
Query: 522 REEGKLCGQKTSKNPKSAVVEEFQVPYNKLQVIFTSDFSNEERFTGFAAYYVAVDVNECT 701
R GK CG +T E N ++V F SD + +R GF A++ + D +EC
Sbjct: 694 RLHGKFCGSETP--------EVITSQSNNMRVEFKSDNTVSKR--GFRAHFFS-DKDECA 742
Query: 702 DFADSPCSHFCNNYIGGYFCSCPPEYFLHEDKKNCGVNCSGDVFTTLIGEVASXXXXXXX 881
+ C H C N G Y C C Y LHE+ ++C ++ G + S
Sbjct: 743 K-DNGGCQHECVNTFGSYLCRCRNGYRLHENGQDCKEAGCVHKISSTEGSLVSPNWPDKY 801
Query: 882 XENSRCDYQILLEEGFQVVVTMRRKDFDVEQPNQGA 989
C + I G +V +T +F++EQ + A
Sbjct: 802 PSRRECTWTISSTAGHRVKLTF--NEFEIEQHQECA 835
Score = 56.2 bits (134), Expect = 5e-08
Identities = 36/111 (32%), Positives = 54/111 (48%), Gaps = 4/111 (3%)
Frame = +3
Query: 354 GEILSPNYPQAYPNEVEKSWDIEVPEGYGIHLYFTHLDIELSENCAYDSVQIKSGGREE- 530
G ++SPN+P YP+ E +W I G+ + L F +IE + CAYD +++ G +
Sbjct: 790 GSLVSPNWPDKYPSRRECTWTISSTAGHRVKLTFNEFEIEQHQECAYDHLELYDGPDSQA 849
Query: 531 ---GKLCGQKTSKNPKSAVVEEFQVPYNKLQVIFTSDFSNEERFTGFAAYY 674
G+ CG SK P V + L + F SD S + R GF A +
Sbjct: 850 PILGRFCG---SKKPDPVVASG-----SSLFLRFYSDASVQRR--GFQAVH 890
>ref|XP_869787.2| PREDICTED: tolloid-like 2-like isoform 2 [Bos taurus].
Length = 1020
Score = 103 bits (258), Expect = 2e-22
Identities = 67/198 (33%), Positives = 96/198 (48%), Gaps = 4/198 (2%)
Frame = +3
Query: 354 GEILSPNYPQAYPNEVEKSWDIEVPEGYGIHLYFTHLDIELSENCAYDSVQIKSGGREE- 530
G+I SPNYP Y E W I V EGY + L F +IE ++CAYD ++I+ G E+
Sbjct: 478 GQIQSPNYPDDYRPSKECVWRITVSEGYHVGLTFQAFEIERHDSCAYDYLEIRDGFTEDS 537
Query: 531 ---GKLCGQKTSKNPKSAVVEEFQVPYNKLQVIFTSDFSNEERFTGFAAYYVAVDVNECT 701
G CG + + KS+ N++ + F SD S + GFAA + +V+EC+
Sbjct: 538 ALIGHFCGYEKPDDVKSS--------SNRMWMKFVSDGSINK--AGFAANFFK-EVDECS 586
Query: 702 DFADSPCSHFCNNYIGGYFCSCPPEYFLHEDKKNCGVNCSGDVFTTLIGEVASXXXXXXX 881
C C N +G Y C C P Y L DKK C V C G + T L G + S
Sbjct: 587 WPDHGGCEQRCMNTLGSYKCMCDPGYELAADKKACEVACGGFI-TKLNGTITSPGWPKEY 645
Query: 882 XENSRCDYQILLEEGFQV 935
N C +Q++ +++
Sbjct: 646 PTNKNCVWQVVAPAQYRI 663
Score = 90.9 bits (224), Expect = 2e-18
Identities = 63/216 (29%), Positives = 96/216 (44%), Gaps = 4/216 (1%)
Frame = +3
Query: 354 GEILSPNYPQAYPNEVEKSWDIEVPEGYGIHLYFTHLDIELSENCAYDSVQIKSG----G 521
G I SP +P+ YP W + P Y I L F ++E ++ C YD V+++SG
Sbjct: 634 GTITSPGWPKEYPTNKNCVWQVVAPAQYRISLQFEVFELEGNDVCKYDFVEVRSGLSPDA 693
Query: 522 REEGKLCGQKTSKNPKSAVVEEFQVPYNKLQVIFTSDFSNEERFTGFAAYYVAVDVNECT 701
R GK CG +T E N ++V F SD + +R GF A++ + D +EC
Sbjct: 694 RLHGKFCGSETP--------EVITSQSNNMRVEFKSDNTVSKR--GFRAHFFS-DKDECA 742
Query: 702 DFADSPCSHFCNNYIGGYFCSCPPEYFLHEDKKNCGVNCSGDVFTTLIGEVASXXXXXXX 881
+ C H C N G Y C C Y LHE+ ++C ++ G + S
Sbjct: 743 K-DNGGCQHECVNTFGSYLCRCRNGYRLHENGQDCKEAGCVHKISSTEGSLVSPNWPDKY 801
Query: 882 XENSRCDYQILLEEGFQVVVTMRRKDFDVEQPNQGA 989
C + I G +V +T +F++EQ + A
Sbjct: 802 PSRRECTWTISSTAGHRVKLTF--NEFEIEQHQECA 835
Score = 56.2 bits (134), Expect = 5e-08
Identities = 36/111 (32%), Positives = 54/111 (48%), Gaps = 4/111 (3%)
Frame = +3
Query: 354 GEILSPNYPQAYPNEVEKSWDIEVPEGYGIHLYFTHLDIELSENCAYDSVQIKSGGREE- 530
G ++SPN+P YP+ E +W I G+ + L F +IE + CAYD +++ G +
Sbjct: 790 GSLVSPNWPDKYPSRRECTWTISSTAGHRVKLTFNEFEIEQHQECAYDHLELYDGPDSQA 849
Query: 531 ---GKLCGQKTSKNPKSAVVEEFQVPYNKLQVIFTSDFSNEERFTGFAAYY 674
G+ CG SK P V + L + F SD S + R GF A +
Sbjct: 850 PILGRFCG---SKKPDPVVASG-----SSLFLRFYSDASVQRR--GFQAVH 890
>ref|NP_001180043.1| tolloid-like 1 [Bos taurus].
Length = 1013
Score = 93.6 bits (231), Expect = 3e-19
Identities = 59/196 (30%), Positives = 90/196 (45%)
Frame = +3
Query: 354 GEILSPNYPQAYPNEVEKSWDIEVPEGYGIHLYFTHLDIELSENCAYDSVQIKSGGREEG 533
G+I SPNYP Y E W I V E + L F +IE +NCAYD ++++ G E
Sbjct: 471 GQIQSPNYPDDYRPMKECVWKIAVSEDCYVGLIFQAFEIERHDNCAYDYLEVRDGTNESS 530
Query: 534 KLCGQKTSKNPKSAVVEEFQVPYNKLQVIFTSDFSNEERFTGFAAYYVAVDVNECTDFAD 713
L G+ + E+ + N L + F SD + + GFAA + + +EC
Sbjct: 531 PLIGRFCGYDKP----EDIRSTSNTLWMKFVSDGTVNK--AGFAANFFK-EEDECAKPDR 583
Query: 714 SPCSHFCNNYIGGYFCSCPPEYFLHEDKKNCGVNCSGDVFTTLIGEVASXXXXXXXXENS 893
C C N +G Y C+C P Y L D++ C C G + T L G + + N
Sbjct: 584 GGCEQHCLNTLGSYQCACEPGYELGPDRRTCEAACGG-LLTKLNGTITTPGWPKEYPPNK 642
Query: 894 RCDYQILLEEGFQVVV 941
C +Q++ +++ V
Sbjct: 643 HCIWQVVAPTQYRISV 658
Score = 88.6 bits (218), Expect = 8e-18
Identities = 60/213 (28%), Positives = 95/213 (44%), Gaps = 1/213 (0%)
Frame = +3
Query: 354 GEILSPNYPQAYPNEVEKSWDIEVPEGYGIHLYFTHLDIELSENCAYDSVQIKSGGREEG 533
G I +P +P+ YP W + P Y I + F ++E +E C YD V+I SG E
Sbjct: 627 GTITTPGWPKEYPPNKHCIWQVVAPTQYRISVKFEFFELEGNEVCKYDYVEIWSGLSSES 686
Query: 534 KLCGQKTSKNPKSAVVEEFQVPYNKLQVIFTSDFSNEERFTGFAAYYVAVDVNECTDFAD 713
KL G+ + F N +++ F SD N GF A++ + D +EC+ +
Sbjct: 687 KLHGKYCGAEVPEVITSHF----NNMRIEFKSD--NTVSKKGFKAHFFS-DKDECSK-DN 738
Query: 714 SPCSHFCNNYIGGYFCSCPPEYFLHEDKKNC-GVNCSGDVFTTLIGEVASXXXXXXXXEN 890
C H C N +G Y C C + LHE+K +C C + + G + S
Sbjct: 739 GGCQHECVNTMGSYLCQCRNGFVLHENKHDCKEAECEQKIHSP-SGFITSPNWPDKYPSR 797
Query: 891 SRCDYQILLEEGFQVVVTMRRKDFDVEQPNQGA 989
C ++I G +V + +F++EQ + A
Sbjct: 798 KECTWEISATPGHRVKLAF--TEFEIEQHQECA 828
Score = 63.9 bits (154), Expect = 2e-10
Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 4/109 (3%)
Frame = +3
Query: 354 GEILSPNYPQAYPNEVEKSWDIEVPEGYGIHLYFTHLDIELSENCAYDSVQIKSGGREE- 530
G I SPN+P YP+ E +W+I G+ + L FT +IE + CAYD +++ G E+
Sbjct: 783 GFITSPNWPDKYPSRKECTWEISATPGHRVKLAFTEFEIEQHQECAYDHLEVFDGETEKS 842
Query: 531 ---GKLCGQKTSKNPKSAVVEEFQVPYNKLQVIFTSDFSNEERFTGFAA 668
G+LCG K + E N + V F SD S + + GF A
Sbjct: 843 PVLGRLCGNK--------IPEPLVATGNNMFVRFVSDASVQRK--GFQA 881
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 45,048,263
Number of extensions: 1381766
Number of successful extensions: 6056
Number of sequences better than 1.0e-05: 43
Number of HSP's gapped: 5978
Number of HSP's successfully gapped: 82
Length of query: 351
Length of database: 17,681,374
Length adjustment: 103
Effective length of query: 248
Effective length of database: 14,273,310
Effective search space: 3539780880
Effective search space used: 3539780880
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007367
(1054 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_867216.1| PREDICTED: similar to Complement C1s subcompone... 419 e-126
Alignment gi|XP_543841.2| PREDICTED: similar to Complement C1s subcompone... 419 e-126
Alignment gi|XP_853320.1| PREDICTED: similar to Complement C1s subcompone... 419 e-126
Alignment gi|XP_850273.1| PREDICTED: similar to mannan-binding lectin ser... 191 8e-49
Alignment gi|XP_861032.1| PREDICTED: similar to mannan-binding lectin ser... 191 8e-49
Alignment gi|XP_534901.2| PREDICTED: similar to Complement C1r subcompone... 159 4e-39
Alignment gi|XP_545245.2| PREDICTED: similar to mannan-binding lectin ser... 130 3e-30
Alignment gi|XP_543945.2| PREDICTED: similar to tolloid-like 2 [Canis fam... 105 6e-23
Alignment gi|XP_867183.1| PREDICTED: similar to Complement C1r subcompone... 103 3e-22
Alignment gi|XP_539791.2| PREDICTED: similar to tolloid-like 1 [Canis fam... 98 1e-20
>ref|XP_867216.1| PREDICTED: similar to Complement C1s subcomponent precursor (C1
esterase) isoform 3 [Canis familiaris].
Length = 695
Score = 419 bits (1078), Expect(2) = e-126
Identities = 195/232 (84%), Positives = 209/232 (90%)
Frame = +3
Query: 276 MDKLPGMWCIVLLSLLAWVDAEPTMYGEILSPNYPQAYPNEVEKSWDIEVPEGYGIHLYF 455
M+KLP MWCIVL SLLA V AEPTMYGEILSPNYPQAYPNE+EKSW+IEVPEGYGIHLYF
Sbjct: 1 MNKLPEMWCIVLFSLLASVYAEPTMYGEILSPNYPQAYPNEIEKSWNIEVPEGYGIHLYF 60
Query: 456 THLDIELSENCAYDSVQIKSGGREEGKLCGQKTSKNPKSAVVEEFQVPYNKLQVIFTSDF 635
THLDIELSENCAYDSVQI SG EEGKLCGQKTSKNP S +VEEFQ+P+N+LQVIF SDF
Sbjct: 61 THLDIELSENCAYDSVQIMSGDFEEGKLCGQKTSKNPNSPIVEEFQIPHNRLQVIFKSDF 120
Query: 636 SNEERFTGFAAYYVAVDVNECTDFADSPCSHFCNNYIGGYFCSCPPEYFLHEDKKNCGVN 815
SNEERFTGFAAYYVAVD+NECTDFAD PCSHFCNN+IGGYFCSCPPEYFLHED KNCGVN
Sbjct: 121 SNEERFTGFAAYYVAVDINECTDFADVPCSHFCNNFIGGYFCSCPPEYFLHEDMKNCGVN 180
Query: 816 CSGDVFTTLIGEVASXXXXXXXXENSRCDYQILLEEGFQVVVTMRRKDFDVE 971
CSGDVFTTL GE+ S ENSRCDYQI LE+G+QVVVT+RR+DFDVE
Sbjct: 181 CSGDVFTTLTGEITSPNYPNPYPENSRCDYQIQLEDGYQVVVTVRREDFDVE 232
Score = 50.4 bits (119), Expect(2) = e-126
Identities = 20/28 (71%), Positives = 23/28 (82%)
Frame = +2
Query: 971 TAKSGGHCPDSLIFVAGNPQFGSYCGNG 1054
+A S GHCPDSL+FVAG+ QFG YCG G
Sbjct: 233 SADSNGHCPDSLVFVAGDKQFGPYCGKG 260
>ref|XP_543841.2| PREDICTED: similar to Complement C1s subcomponent precursor (C1
esterase) isoform 1 [Canis familiaris].
Length = 695
Score = 419 bits (1078), Expect(2) = e-126
Identities = 195/232 (84%), Positives = 209/232 (90%)
Frame = +3
Query: 276 MDKLPGMWCIVLLSLLAWVDAEPTMYGEILSPNYPQAYPNEVEKSWDIEVPEGYGIHLYF 455
M+KLP MWCIVL SLLA V AEPTMYGEILSPNYPQAYPNE+EKSW+IEVPEGYGIHLYF
Sbjct: 1 MNKLPEMWCIVLFSLLASVYAEPTMYGEILSPNYPQAYPNEIEKSWNIEVPEGYGIHLYF 60
Query: 456 THLDIELSENCAYDSVQIKSGGREEGKLCGQKTSKNPKSAVVEEFQVPYNKLQVIFTSDF 635
THLDIELSENCAYDSVQI SG EEGKLCGQKTSKNP S +VEEFQ+P+N+LQVIF SDF
Sbjct: 61 THLDIELSENCAYDSVQIMSGDFEEGKLCGQKTSKNPNSPIVEEFQIPHNRLQVIFKSDF 120
Query: 636 SNEERFTGFAAYYVAVDVNECTDFADSPCSHFCNNYIGGYFCSCPPEYFLHEDKKNCGVN 815
SNEERFTGFAAYYVAVD+NECTDFAD PCSHFCNN+IGGYFCSCPPEYFLHED KNCGVN
Sbjct: 121 SNEERFTGFAAYYVAVDINECTDFADVPCSHFCNNFIGGYFCSCPPEYFLHEDMKNCGVN 180
Query: 816 CSGDVFTTLIGEVASXXXXXXXXENSRCDYQILLEEGFQVVVTMRRKDFDVE 971
CSGDVFTTL GE+ S ENSRCDYQI LE+G+QVVVT+RR+DFDVE
Sbjct: 181 CSGDVFTTLTGEITSPNYPNPYPENSRCDYQIQLEDGYQVVVTVRREDFDVE 232
Score = 50.4 bits (119), Expect(2) = e-126
Identities = 20/28 (71%), Positives = 23/28 (82%)
Frame = +2
Query: 971 TAKSGGHCPDSLIFVAGNPQFGSYCGNG 1054
+A S GHCPDSL+FVAG+ QFG YCG G
Sbjct: 233 SADSNGHCPDSLVFVAGDKQFGPYCGKG 260
>ref|XP_853320.1| PREDICTED: similar to Complement C1s subcomponent precursor (C1
esterase) isoform 2 [Canis familiaris].
Length = 695
Score = 419 bits (1078), Expect(2) = e-126
Identities = 195/232 (84%), Positives = 209/232 (90%)
Frame = +3
Query: 276 MDKLPGMWCIVLLSLLAWVDAEPTMYGEILSPNYPQAYPNEVEKSWDIEVPEGYGIHLYF 455
M+KLP MWCIVL SLLA V AEPTMYGEILSPNYPQAYPNE+EKSW+IEVPEGYGIHLYF
Sbjct: 1 MNKLPEMWCIVLFSLLASVYAEPTMYGEILSPNYPQAYPNEIEKSWNIEVPEGYGIHLYF 60
Query: 456 THLDIELSENCAYDSVQIKSGGREEGKLCGQKTSKNPKSAVVEEFQVPYNKLQVIFTSDF 635
THLDIELSENCAYDSVQI SG EEGKLCGQKTSKNP S +VEEFQ+P+N+LQVIF SDF
Sbjct: 61 THLDIELSENCAYDSVQIMSGDFEEGKLCGQKTSKNPNSPIVEEFQIPHNRLQVIFKSDF 120
Query: 636 SNEERFTGFAAYYVAVDVNECTDFADSPCSHFCNNYIGGYFCSCPPEYFLHEDKKNCGVN 815
SNEERFTGFAAYYVAVD+NECTDFAD PCSHFCNN+IGGYFCSCPPEYFLHED KNCGVN
Sbjct: 121 SNEERFTGFAAYYVAVDINECTDFADVPCSHFCNNFIGGYFCSCPPEYFLHEDMKNCGVN 180
Query: 816 CSGDVFTTLIGEVASXXXXXXXXENSRCDYQILLEEGFQVVVTMRRKDFDVE 971
CSGDVFTTL GE+ S ENSRCDYQI LE+G+QVVVT+RR+DFDVE
Sbjct: 181 CSGDVFTTLTGEITSPNYPNPYPENSRCDYQIQLEDGYQVVVTVRREDFDVE 232
Score = 50.4 bits (119), Expect(2) = e-126
Identities = 20/28 (71%), Positives = 23/28 (82%)
Frame = +2
Query: 971 TAKSGGHCPDSLIFVAGNPQFGSYCGNG 1054
+A S GHCPDSL+FVAG+ QFG YCG G
Sbjct: 233 SADSNGHCPDSLVFVAGDKQFGPYCGKG 260
>ref|XP_850273.1| PREDICTED: similar to mannan-binding lectin serine protease 1
isoform 2 precursor isoform 2 [Canis familiaris].
Length = 728
Score = 191 bits (486), Expect = 8e-49
Identities = 97/227 (42%), Positives = 140/227 (61%), Gaps = 3/227 (1%)
Frame = +3
Query: 300 CIVLLSLLAWVDAEPTMYGEILSPNYPQAYPNEVEKSWDIEVPEGYGIHLYFTHLDIELS 479
C+ LL A M+G+I SP YP +YP++ E +W+I VPEG+ I LYF H ++E S
Sbjct: 11 CLSLLKASAHTVELNNMFGQIQSPGYPDSYPSDSEVTWNITVPEGFRIKLYFMHFNLESS 70
Query: 480 ENCAYDSVQIKSGGREEGKLCGQKTSKNPKSAVVEEFQVPYNKLQVIFTSDFSNEERFTG 659
C YD V++++ + CG++T+ ++ E P + + + F SDFSNEERFTG
Sbjct: 71 YLCEYDYVKVETEEQVLATFCGRETTDTEQTPGQEVVFSPGSFMSITFRSDFSNEERFTG 130
Query: 660 FAAYYVAVDVNECTDFADS--PCSHFCNNYIGGYFCSCPPEYFLHEDKKNCGVNCSGDVF 833
F A+Y+AVDV+ECT+ D C H+C+NYIGGY+CSC Y LH D + C V CS +V+
Sbjct: 131 FDAHYMAVDVDECTEREDEELSCDHYCHNYIGGYYCSCRFGYLLHTDNRTCRVECSDNVY 190
Query: 834 TTLIGEVASXXXXXXXXENSRCDYQILLEEGFQVVVTMRRKD-FDVE 971
T G + S ++S C Y I LEEGF +V+++ +D FD+E
Sbjct: 191 TQRTGVITSPDFPNPYPKSSECFYTIELEEGF--MVSLQFEDIFDIE 235
Score = 59.3 bits (142), Expect = 6e-09
Identities = 41/120 (34%), Positives = 59/120 (49%), Gaps = 3/120 (2%)
Frame = +3
Query: 354 GEILSPNYPQAYPNEVEKSWDIEVPEGYGIHLYFTHL-DIELSEN--CAYDSVQIKSGGR 524
G I SP++P YP E + IE+ EG+ + L F + DIE C YD ++IK+G +
Sbjct: 195 GVITSPDFPNPYPKSSECFYTIELEEGFMVSLQFEDIFDIEDHPEVPCPYDYIKIKAGPK 254
Query: 525 EEGKLCGQKTSKNPKSAVVEEFQVPYNKLQVIFTSDFSNEERFTGFAAYYVAVDVNECTD 704
G CG+K E + +Q++F SD S E + G+ Y A NEC D
Sbjct: 255 VLGPFCGEKAP--------EPINTESHSVQILFRSDNSGENQ--GWRLSYRATG-NECPD 303
>ref|XP_861032.1| PREDICTED: similar to mannan-binding lectin serine protease 1
isoform 1 precursor isoform 3 [Canis familiaris].
Length = 699
Score = 191 bits (486), Expect = 8e-49
Identities = 97/227 (42%), Positives = 140/227 (61%), Gaps = 3/227 (1%)
Frame = +3
Query: 300 CIVLLSLLAWVDAEPTMYGEILSPNYPQAYPNEVEKSWDIEVPEGYGIHLYFTHLDIELS 479
C+ LL A M+G+I SP YP +YP++ E +W+I VPEG+ I LYF H ++E S
Sbjct: 11 CLSLLKASAHTVELNNMFGQIQSPGYPDSYPSDSEVTWNITVPEGFRIKLYFMHFNLESS 70
Query: 480 ENCAYDSVQIKSGGREEGKLCGQKTSKNPKSAVVEEFQVPYNKLQVIFTSDFSNEERFTG 659
C YD V++++ + CG++T+ ++ E P + + + F SDFSNEERFTG
Sbjct: 71 YLCEYDYVKVETEEQVLATFCGRETTDTEQTPGQEVVFSPGSFMSITFRSDFSNEERFTG 130
Query: 660 FAAYYVAVDVNECTDFADS--PCSHFCNNYIGGYFCSCPPEYFLHEDKKNCGVNCSGDVF 833
F A+Y+AVDV+ECT+ D C H+C+NYIGGY+CSC Y LH D + C V CS +V+
Sbjct: 131 FDAHYMAVDVDECTEREDEELSCDHYCHNYIGGYYCSCRFGYLLHTDNRTCRVECSDNVY 190
Query: 834 TTLIGEVASXXXXXXXXENSRCDYQILLEEGFQVVVTMRRKD-FDVE 971
T G + S ++S C Y I LEEGF +V+++ +D FD+E
Sbjct: 191 TQRTGVITSPDFPNPYPKSSECFYTIELEEGF--MVSLQFEDIFDIE 235
Score = 59.3 bits (142), Expect = 6e-09
Identities = 41/120 (34%), Positives = 59/120 (49%), Gaps = 3/120 (2%)
Frame = +3
Query: 354 GEILSPNYPQAYPNEVEKSWDIEVPEGYGIHLYFTHL-DIELSEN--CAYDSVQIKSGGR 524
G I SP++P YP E + IE+ EG+ + L F + DIE C YD ++IK+G +
Sbjct: 195 GVITSPDFPNPYPKSSECFYTIELEEGFMVSLQFEDIFDIEDHPEVPCPYDYIKIKAGPK 254
Query: 525 EEGKLCGQKTSKNPKSAVVEEFQVPYNKLQVIFTSDFSNEERFTGFAAYYVAVDVNECTD 704
G CG+K E + +Q++F SD S E + G+ Y A NEC D
Sbjct: 255 VLGPFCGEKAP--------EPINTESHSVQILFRSDNSGENQ--GWRLSYRATG-NECPD 303
>ref|XP_534901.2| PREDICTED: similar to Complement C1r subcomponent precursor
(Complement component 1, r subcomponent) isoform 1
[Canis familiaris].
Length = 705
Score = 159 bits (402), Expect = 4e-39
Identities = 86/229 (37%), Positives = 120/229 (52%), Gaps = 18/229 (7%)
Frame = +3
Query: 294 MWCIVLLSLLAW------VDAEPTMYGEILSPNYPQAYPNEVEKSWDIEVPEGYGIHLYF 455
MW LL + + + ++GE+ SP YP+ YPN ++K+ I VP G+ + L F
Sbjct: 1 MWLFYLLVPILFCNMGGSIPLSQKLFGEVTSPLYPKPYPNNLDKTTVITVPTGFRVKLVF 60
Query: 456 THLDIELSENCAYDSVQIKSGGREEGKLCGQKTSKNPKSAVVEEFQVPYNKLQVIFTSDF 635
D+E SE C YD V+I + + G+ CGQ S EF NK+Q+ F +DF
Sbjct: 61 WQFDLEPSEGCLYDYVKISADKKTLGRFCGQLGSPLGNPPEAREFVSQGNKMQLTFHTDF 120
Query: 636 SNEERFT-----GFAAYYVAVDVNECTDFADS-------PCSHFCNNYIGGYFCSCPPEY 779
SNEE T GF AYY AVD++EC +S C H C+NY+G YFC+C P Y
Sbjct: 121 SNEENGTIMFHKGFLAYYQAVDLDECASQLNSLEENLQPQCQHLCHNYVGSYFCTCRPGY 180
Query: 780 FLHEDKKNCGVNCSGDVFTTLIGEVASXXXXXXXXENSRCDYQILLEEG 926
L +D +C CS ++FT G V+S + RC+Y I +E G
Sbjct: 181 ELQKDGHSCQAECSNELFTEPSGYVSSLEYPQPYPPDLRCNYSIRVERG 229
Score = 57.4 bits (137), Expect = 2e-08
Identities = 36/118 (30%), Positives = 58/118 (49%), Gaps = 3/118 (2%)
Frame = +3
Query: 354 GEILSPNYPQAYPNEVEKSWDIEVPEGYGIHLYFTH---LDIELSENCAYDSVQIKSGGR 524
G + S YPQ YP ++ ++ I V G +HL F +D +C YD +QI + GR
Sbjct: 203 GYVSSLEYPQPYPPDLRCNYSIRVERGLTLHLKFLEPFEIDDHQQVHCPYDQLQIYANGR 262
Query: 525 EEGKLCGQKTSKNPKSAVVEEFQVPYNKLQVIFTSDFSNEERFTGFAAYYVAVDVNEC 698
G+ CG+K +F N + ++F +D S + R G+ +YV +V +C
Sbjct: 263 NIGEFCGKKRP--------TDFDTSSNAVDLLFFTDESGDSR--GWKLHYV-TEVIKC 309
>ref|XP_545245.2| PREDICTED: similar to mannan-binding lectin serine protease 1
isoform 2 precursor isoform 1 [Canis familiaris].
Length = 697
Score = 130 bits (326), Expect = 3e-30
Identities = 66/147 (44%), Positives = 93/147 (63%), Gaps = 3/147 (2%)
Frame = +3
Query: 540 CGQKTSKNPKSAVVEEFQVPYNKLQVIFTSDFSNEERFTGFAAYYVAVDVNECTDFADSP 719
CG++T+ ++ E P + + + F SDFSNEERFTGF A+Y+AVDV+ECT+ D
Sbjct: 60 CGRETTDTEQTPGQEVVFSPGSFMSITFRSDFSNEERFTGFDAHYMAVDVDECTEREDEE 119
Query: 720 --CSHFCNNYIGGYFCSCPPEYFLHEDKKNCGVNCSGDVFTTLIGEVASXXXXXXXXENS 893
C H+C+NYIGGY+CSC Y LH D + C V CS +V+T G + S ++S
Sbjct: 120 LSCDHYCHNYIGGYYCSCRFGYLLHTDNRTCRVECSDNVYTQRTGVITSPDFPNPYPKSS 179
Query: 894 RCDYQILLEEGFQVVVTMRRKD-FDVE 971
C Y I LEEGF +V+++ +D FD+E
Sbjct: 180 ECFYTIELEEGF--MVSLQFEDIFDIE 204
Score = 59.3 bits (142), Expect = 6e-09
Identities = 41/120 (34%), Positives = 59/120 (49%), Gaps = 3/120 (2%)
Frame = +3
Query: 354 GEILSPNYPQAYPNEVEKSWDIEVPEGYGIHLYFTHL-DIELSEN--CAYDSVQIKSGGR 524
G I SP++P YP E + IE+ EG+ + L F + DIE C YD ++IK+G +
Sbjct: 164 GVITSPDFPNPYPKSSECFYTIELEEGFMVSLQFEDIFDIEDHPEVPCPYDYIKIKAGPK 223
Query: 525 EEGKLCGQKTSKNPKSAVVEEFQVPYNKLQVIFTSDFSNEERFTGFAAYYVAVDVNECTD 704
G CG+K E + +Q++F SD S E + G+ Y A NEC D
Sbjct: 224 VLGPFCGEKAP--------EPINTESHSVQILFRSDNSGENQ--GWRLSYRATG-NECPD 272
>ref|XP_543945.2| PREDICTED: similar to tolloid-like 2 [Canis familiaris].
Length = 1032
Score = 105 bits (263), Expect = 6e-23
Identities = 67/198 (33%), Positives = 98/198 (49%), Gaps = 4/198 (2%)
Frame = +3
Query: 354 GEILSPNYPQAYPNEVEKSWDIEVPEGYGIHLYFTHLDIELSENCAYDSVQIKSGGREE- 530
G+I SPNYP Y E W I V EG+ + L F +IE ++CAYD ++I+ G EE
Sbjct: 480 GQIQSPNYPDDYRPSKECVWRITVSEGFHVGLTFQAFEIERHDSCAYDYLEIRDGPTEES 539
Query: 531 ---GKLCGQKTSKNPKSAVVEEFQVPYNKLQVIFTSDFSNEERFTGFAAYYVAVDVNECT 701
G CG + ++ KS+ N++ + F SD S + GFAA + +V+EC+
Sbjct: 540 ALIGHFCGYEKPEDVKSS--------SNRMWMKFVSDGSINK--AGFAANFFK-EVDECS 588
Query: 702 DFADSPCSHFCNNYIGGYFCSCPPEYFLHEDKKNCGVNCSGDVFTTLIGEVASXXXXXXX 881
C C N +G Y C+C P Y L DKK C V C G + T L G + S
Sbjct: 589 WPDHGGCEQRCVNTLGSYKCACDPGYELAADKKTCEVACGGFI-TKLNGTITSPGWPKEY 647
Query: 882 XENSRCDYQILLEEGFQV 935
N C +Q++ +++
Sbjct: 648 PTNKNCVWQVVAPAQYRI 665
Score = 91.3 bits (225), Expect = 1e-18
Identities = 63/216 (29%), Positives = 97/216 (44%), Gaps = 4/216 (1%)
Frame = +3
Query: 354 GEILSPNYPQAYPNEVEKSWDIEVPEGYGIHLYFTHLDIELSENCAYDSVQIKSG----G 521
G I SP +P+ YP W + P Y I L F ++E ++ C YD V+++SG
Sbjct: 636 GTITSPGWPKEYPTNKNCVWQVVAPAQYRISLQFEVFELEGNDVCKYDFVEVRSGLSPDA 695
Query: 522 REEGKLCGQKTSKNPKSAVVEEFQVPYNKLQVIFTSDFSNEERFTGFAAYYVAVDVNECT 701
R GK CG S + E N ++V F SD + +R GF A++ + D +EC
Sbjct: 696 RLHGKFCG--------SEMPEVITSQSNNMRVEFKSDNTVSKR--GFRAHFFS-DKDECA 744
Query: 702 DFADSPCSHFCNNYIGGYFCSCPPEYFLHEDKKNCGVNCSGDVFTTLIGEVASXXXXXXX 881
+ + C H C N G Y C C Y LH++ +C ++ G +AS
Sbjct: 745 E-DNGRCQHECVNTSGSYLCRCRTGYRLHDNGHDCKEAGCAHKISSAEGTLASPNWPDKY 803
Query: 882 XENSRCDYQILLEEGFQVVVTMRRKDFDVEQPNQGA 989
C + I G +V +T +F++EQ + A
Sbjct: 804 PSRRECTWNISSTAGHRVKLTF--NEFEIEQHQECA 837
Score = 53.9 bits (128), Expect = 2e-07
Identities = 36/111 (32%), Positives = 53/111 (47%), Gaps = 4/111 (3%)
Frame = +3
Query: 354 GEILSPNYPQAYPNEVEKSWDIEVPEGYGIHLYFTHLDIELSENCAYDSVQIKSGGRE-- 527
G + SPN+P YP+ E +W+I G+ + L F +IE + CAYD +++ G
Sbjct: 792 GTLASPNWPDKYPSRRECTWNISSTAGHRVKLTFNEFEIEQHQECAYDHLELYDGPDSLA 851
Query: 528 --EGKLCGQKTSKNPKSAVVEEFQVPYNKLQVIFTSDFSNEERFTGFAAYY 674
G+ CG SK P V + L V F SD S + + GF A +
Sbjct: 852 PILGRFCG---SKKPDPVVASG-----SSLFVRFYSDASVQRK--GFQAVH 892
>ref|XP_867183.1| PREDICTED: similar to Complement C1r subcomponent precursor
(Complement component 1, r subcomponent) isoform 2
[Canis familiaris].
Length = 628
Score = 103 bits (257), Expect = 3e-22
Identities = 58/152 (38%), Positives = 81/152 (53%), Gaps = 11/152 (7%)
Frame = +3
Query: 294 MWCIVLLSLLAW------VDAEPTMYGEILSPNYPQAYPNEVEKSWDIEVPEGYGIHLYF 455
MW LL + + + ++GE+ SP YP+ YPN ++K+ I VP G+ + L F
Sbjct: 1 MWLFYLLVPILFCNMGGSIPLSQKLFGEVTSPLYPKPYPNNLDKTTVITVPTGFRVKLVF 60
Query: 456 THLDIELSENCAYDSVQIKSGGREEGKLCGQKTSKNPKSAVVEEFQVPYNKLQVIFTSDF 635
D+E SE C YD V+I + + G+ CGQ S EF NK+Q+ F +DF
Sbjct: 61 WQFDLEPSEGCLYDYVKISADKKTLGRFCGQLGSPLGNPPEAREFVSQGNKMQLTFHTDF 120
Query: 636 SNEERFT-----GFAAYYVAVDVNECTDFADS 716
SNEE T GF AYY AVD++EC +S
Sbjct: 121 SNEENGTIMFHKGFLAYYQAVDLDECASQLNS 152
>ref|XP_539791.2| PREDICTED: similar to tolloid-like 1 [Canis familiaris].
Length = 1045
Score = 97.8 bits (242), Expect = 1e-20
Identities = 63/206 (30%), Positives = 99/206 (48%)
Frame = +3
Query: 354 GEILSPNYPQAYPNEVEKSWDIEVPEGYGIHLYFTHLDIELSENCAYDSVQIKSGGREEG 533
G+I SPNYP Y E W I V E Y + L F +IE +NCAYD ++++ G E
Sbjct: 503 GQIQSPNYPDDYRPMKECVWKITVSEDYYVGLTFQAFEIERHDNCAYDYLEVRDGTSENS 562
Query: 534 KLCGQKTSKNPKSAVVEEFQVPYNKLQVIFTSDFSNEERFTGFAAYYVAVDVNECTDFAD 713
L G+ + E+ + N L + F SD + + GFAA + + +EC
Sbjct: 563 PLIGRFCGYDKP----EDIRSTSNTLWMKFVSDGTVNK--AGFAANFFK-EEDECAKPDR 615
Query: 714 SPCSHFCNNYIGGYFCSCPPEYFLHEDKKNCGVNCSGDVFTTLIGEVASXXXXXXXXENS 893
C C N +G Y C+C P Y L DK++C C G + T L G + + N
Sbjct: 616 GGCEQRCLNTLGSYQCACEPGYELGPDKRSCEAACGG-LLTKLNGTITTPGWPKEYPPNK 674
Query: 894 RCDYQILLEEGFQVVVTMRRKDFDVE 971
C +Q++ ++ ++M+ + F++E
Sbjct: 675 NCVWQVVAPTQYR--ISMKFEFFELE 698
Score = 89.7 bits (221), Expect = 4e-18
Identities = 72/270 (26%), Positives = 113/270 (41%), Gaps = 1/270 (0%)
Frame = +3
Query: 183 CVCWTNTQPGTSLAPKSRGAKSQDQKSCSPGMDKLPGMWCIVLLSLLAWVDAEPTMYGEI 362
C C +PG L P D++SC C LL+ L G I
Sbjct: 631 CAC----EPGYELGP--------DKRSCEAA--------CGGLLTKLN---------GTI 661
Query: 363 LSPNYPQAYPNEVEKSWDIEVPEGYGIHLYFTHLDIELSENCAYDSVQIKSGGREEGKLC 542
+P +P+ YP W + P Y I + F ++E +E C YD V+I SG E KL
Sbjct: 662 TTPGWPKEYPPNKNCVWQVVAPTQYRISMKFEFFELEGNEVCKYDYVEIWSGLSSESKLH 721
Query: 543 GQKTSKNPKSAVVEEFQVPYNKLQVIFTSDFSNEERFTGFAAYYVAVDVNECTDFADSPC 722
G+ + +F N +++ F SD N GF A++ + D +EC+ + C
Sbjct: 722 GKFCGAEVPEVITSQF----NNMRIEFRSD--NTVSKKGFKAHFFS-DKDECSK-DNGGC 773
Query: 723 SHFCNNYIGGYFCSCPPEYFLHEDKKNC-GVNCSGDVFTTLIGEVASXXXXXXXXENSRC 899
H C N +G Y C C + LHE+K +C C + + G + S C
Sbjct: 774 QHECVNTMGSYMCQCRNGFVLHENKHDCKEAECEQKIHSP-SGFITSPNWPDKYPSRKEC 832
Query: 900 DYQILLEEGFQVVVTMRRKDFDVEQPNQGA 989
++I G ++ + +F++EQ + A
Sbjct: 833 TWEISATPGHRIKLAF--SEFEIEQHQECA 860
Score = 64.3 bits (155), Expect = 2e-10
Identities = 39/109 (35%), Positives = 56/109 (51%), Gaps = 4/109 (3%)
Frame = +3
Query: 354 GEILSPNYPQAYPNEVEKSWDIEVPEGYGIHLYFTHLDIELSENCAYDSVQIKSGGREE- 530
G I SPN+P YP+ E +W+I G+ I L F+ +IE + CAYD +++ G E+
Sbjct: 815 GFITSPNWPDKYPSRKECTWEISATPGHRIKLAFSEFEIEQHQECAYDHLEVFDGETEKS 874
Query: 531 ---GKLCGQKTSKNPKSAVVEEFQVPYNKLQVIFTSDFSNEERFTGFAA 668
G+LCG K + E NK+ V F SD S + + GF A
Sbjct: 875 PILGRLCGNK--------IPEPLLATGNKMFVRFISDASVQRK--GFQA 913
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 46,953,692
Number of extensions: 1416265
Number of successful extensions: 6249
Number of sequences better than 1.0e-05: 37
Number of HSP's gapped: 6151
Number of HSP's successfully gapped: 69
Length of query: 351
Length of database: 18,874,504
Length adjustment: 104
Effective length of query: 247
Effective length of database: 15,407,560
Effective search space: 3805667320
Effective search space used: 3805667320
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007367
(1054 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001725.1| complement C1s subcomponent precursor [Homo sap... 413 e-122
Alignment gi|NP_958850.1| complement C1s subcomponent precursor [Homo sap... 413 e-122
Alignment gi|NP_001870.3| mannan-binding lectin serine protease 1 isoform... 185 5e-47
Alignment gi|NP_001027019.1| mannan-binding lectin serine protease 1 isof... 185 5e-47
Alignment gi|NP_624302.1| mannan-binding lectin serine protease 1 isoform... 185 5e-47
Alignment gi|NP_006601.2| mannan-binding lectin serine protease 2 isoform... 181 8e-46
Alignment gi|NP_001724.3| complement C1r subcomponent precursor [Homo sap... 160 2e-39
Alignment gi|NP_631947.1| mannan-binding lectin serine protease 2 isoform... 145 5e-35
Alignment gi|NP_036597.1| tolloid-like protein 2 precursor [Homo sapiens]. 108 8e-24
Alignment gi|NP_006120.1| bone morphogenetic protein 1 isoform 3 precurso... 99 5e-21
>ref|NP_001725.1| complement C1s subcomponent precursor [Homo sapiens].
Length = 688
Score = 413 bits (1061), Expect(2) = e-122
Identities = 191/235 (81%), Positives = 205/235 (87%)
Frame = +3
Query: 294 MWCIVLLSLLAWVDAEPTMYGEILSPNYPQAYPNEVEKSWDIEVPEGYGIHLYFTHLDIE 473
MWCIVL SLLAWV AEPTMYGEILSPNYPQAYP+EVEKSWDIEVPEGYGIHLYFTHLDIE
Sbjct: 1 MWCIVLFSLLAWVYAEPTMYGEILSPNYPQAYPSEVEKSWDIEVPEGYGIHLYFTHLDIE 60
Query: 474 LSENCAYDSVQIKSGGREEGKLCGQKTSKNPKSAVVEEFQVPYNKLQVIFTSDFSNEERF 653
LSENCAYDSVQI SG EEG+LCGQ++S NP S +VEEFQVPYNKLQVIF SDFSNEERF
Sbjct: 61 LSENCAYDSVQIISGDTEEGRLCGQRSSNNPHSPIVEEFQVPYNKLQVIFKSDFSNEERF 120
Query: 654 TGFAAYYVAVDVNECTDFADSPCSHFCNNYIGGYFCSCPPEYFLHEDKKNCGVNCSGDVF 833
TGFAAYYVA D+NECTDF D PCSHFCNN+IGGYFCSCPPEYFLH+D KNCGVNCSGDVF
Sbjct: 121 TGFAAYYVATDINECTDFVDVPCSHFCNNFIGGYFCSCPPEYFLHDDMKNCGVNCSGDVF 180
Query: 834 TTLIGEVASXXXXXXXXENSRCDYQILLEEGFQVVVTMRRKDFDVEQPNQGATAL 998
T LIGE+AS ENSRC+YQI LE+GFQVVVT+RR+DFDVE + L
Sbjct: 181 TALIGEIASPNYPKPYPENSRCEYQIRLEKGFQVVVTLRREDFDVEAADSAGNCL 235
Score = 43.5 bits (101), Expect(2) = e-122
Identities = 18/27 (66%), Positives = 22/27 (81%)
Frame = +2
Query: 974 AKSGGHCPDSLIFVAGNPQFGSYCGNG 1054
A S G+C DSL+FVAG+ QFG YCG+G
Sbjct: 228 ADSAGNCLDSLVFVAGDRQFGPYCGHG 254
>ref|NP_958850.1| complement C1s subcomponent precursor [Homo sapiens].
Length = 688
Score = 413 bits (1061), Expect(2) = e-122
Identities = 191/235 (81%), Positives = 205/235 (87%)
Frame = +3
Query: 294 MWCIVLLSLLAWVDAEPTMYGEILSPNYPQAYPNEVEKSWDIEVPEGYGIHLYFTHLDIE 473
MWCIVL SLLAWV AEPTMYGEILSPNYPQAYP+EVEKSWDIEVPEGYGIHLYFTHLDIE
Sbjct: 1 MWCIVLFSLLAWVYAEPTMYGEILSPNYPQAYPSEVEKSWDIEVPEGYGIHLYFTHLDIE 60
Query: 474 LSENCAYDSVQIKSGGREEGKLCGQKTSKNPKSAVVEEFQVPYNKLQVIFTSDFSNEERF 653
LSENCAYDSVQI SG EEG+LCGQ++S NP S +VEEFQVPYNKLQVIF SDFSNEERF
Sbjct: 61 LSENCAYDSVQIISGDTEEGRLCGQRSSNNPHSPIVEEFQVPYNKLQVIFKSDFSNEERF 120
Query: 654 TGFAAYYVAVDVNECTDFADSPCSHFCNNYIGGYFCSCPPEYFLHEDKKNCGVNCSGDVF 833
TGFAAYYVA D+NECTDF D PCSHFCNN+IGGYFCSCPPEYFLH+D KNCGVNCSGDVF
Sbjct: 121 TGFAAYYVATDINECTDFVDVPCSHFCNNFIGGYFCSCPPEYFLHDDMKNCGVNCSGDVF 180
Query: 834 TTLIGEVASXXXXXXXXENSRCDYQILLEEGFQVVVTMRRKDFDVEQPNQGATAL 998
T LIGE+AS ENSRC+YQI LE+GFQVVVT+RR+DFDVE + L
Sbjct: 181 TALIGEIASPNYPKPYPENSRCEYQIRLEKGFQVVVTLRREDFDVEAADSAGNCL 235
Score = 43.5 bits (101), Expect(2) = e-122
Identities = 18/27 (66%), Positives = 22/27 (81%)
Frame = +2
Query: 974 AKSGGHCPDSLIFVAGNPQFGSYCGNG 1054
A S G+C DSL+FVAG+ QFG YCG+G
Sbjct: 228 ADSAGNCLDSLVFVAGDRQFGPYCGHG 254
>ref|NP_001870.3| mannan-binding lectin serine protease 1 isoform 1 precursor [Homo
sapiens].
Length = 699
Score = 185 bits (470), Expect = 5e-47
Identities = 91/211 (43%), Positives = 133/211 (63%), Gaps = 3/211 (1%)
Frame = +3
Query: 348 MYGEILSPNYPQAYPNEVEKSWDIEVPEGYGIHLYFTHLDIELSENCAYDSVQIKSGGRE 527
M+G+I SP YP +YP++ E +W+I VP+G+ I LYF H ++E S C YD V++++ +
Sbjct: 27 MFGQIQSPGYPDSYPSDSEVTWNITVPDGFRIKLYFMHFNLESSYLCEYDYVKVETEDQV 86
Query: 528 EGKLCGQKTSKNPKSAVVEEFQVPYNKLQVIFTSDFSNEERFTGFAAYYVAVDVNECTDF 707
CG++T+ ++ E P + + + F SDFSNEERFTGF A+Y+AVDV+EC +
Sbjct: 87 LATFCGRETTDTEQTPGQEVVLSPGSFMSITFRSDFSNEERFTGFDAHYMAVDVDECKER 146
Query: 708 ADS--PCSHFCNNYIGGYFCSCPPEYFLHEDKKNCGVNCSGDVFTTLIGEVASXXXXXXX 881
D C H+C+NYIGGY+CSC Y LH D + C V CS ++FT G + S
Sbjct: 147 EDEELSCDHYCHNYIGGYYCSCRFGYILHTDNRTCRVECSDNLFTQRTGVITSPDFPNPY 206
Query: 882 XENSRCDYQILLEEGFQVVVTMRRKD-FDVE 971
++S C Y I LEEGF +V ++ +D FD+E
Sbjct: 207 PKSSECLYTIELEEGF--MVNLQFEDIFDIE 235
Score = 55.8 bits (133), Expect = 6e-08
Identities = 40/120 (33%), Positives = 58/120 (48%), Gaps = 3/120 (2%)
Frame = +3
Query: 354 GEILSPNYPQAYPNEVEKSWDIEVPEGYGIHLYFTHL-DIELSEN--CAYDSVQIKSGGR 524
G I SP++P YP E + IE+ EG+ ++L F + DIE C YD ++IK G +
Sbjct: 195 GVITSPDFPNPYPKSSECLYTIELEEGFMVNLQFEDIFDIEDHPEVPCPYDYIKIKVGPK 254
Query: 525 EEGKLCGQKTSKNPKSAVVEEFQVPYNKLQVIFTSDFSNEERFTGFAAYYVAVDVNECTD 704
G CG+K E + + ++F SD S E R G+ Y A NEC +
Sbjct: 255 VLGPFCGEKAP--------EPISTQSHSVLILFHSDNSGENR--GWRLSYRAAG-NECPE 303
>ref|NP_001027019.1| mannan-binding lectin serine protease 1 isoform 3 precursor [Homo
sapiens].
Length = 380
Score = 185 bits (470), Expect = 5e-47
Identities = 91/211 (43%), Positives = 133/211 (63%), Gaps = 3/211 (1%)
Frame = +3
Query: 348 MYGEILSPNYPQAYPNEVEKSWDIEVPEGYGIHLYFTHLDIELSENCAYDSVQIKSGGRE 527
M+G+I SP YP +YP++ E +W+I VP+G+ I LYF H ++E S C YD V++++ +
Sbjct: 27 MFGQIQSPGYPDSYPSDSEVTWNITVPDGFRIKLYFMHFNLESSYLCEYDYVKVETEDQV 86
Query: 528 EGKLCGQKTSKNPKSAVVEEFQVPYNKLQVIFTSDFSNEERFTGFAAYYVAVDVNECTDF 707
CG++T+ ++ E P + + + F SDFSNEERFTGF A+Y+AVDV+EC +
Sbjct: 87 LATFCGRETTDTEQTPGQEVVLSPGSFMSITFRSDFSNEERFTGFDAHYMAVDVDECKER 146
Query: 708 ADS--PCSHFCNNYIGGYFCSCPPEYFLHEDKKNCGVNCSGDVFTTLIGEVASXXXXXXX 881
D C H+C+NYIGGY+CSC Y LH D + C V CS ++FT G + S
Sbjct: 147 EDEELSCDHYCHNYIGGYYCSCRFGYILHTDNRTCRVECSDNLFTQRTGVITSPDFPNPY 206
Query: 882 XENSRCDYQILLEEGFQVVVTMRRKD-FDVE 971
++S C Y I LEEGF +V ++ +D FD+E
Sbjct: 207 PKSSECLYTIELEEGF--MVNLQFEDIFDIE 235
Score = 55.8 bits (133), Expect = 6e-08
Identities = 40/120 (33%), Positives = 58/120 (48%), Gaps = 3/120 (2%)
Frame = +3
Query: 354 GEILSPNYPQAYPNEVEKSWDIEVPEGYGIHLYFTHL-DIELSEN--CAYDSVQIKSGGR 524
G I SP++P YP E + IE+ EG+ ++L F + DIE C YD ++IK G +
Sbjct: 195 GVITSPDFPNPYPKSSECLYTIELEEGFMVNLQFEDIFDIEDHPEVPCPYDYIKIKVGPK 254
Query: 525 EEGKLCGQKTSKNPKSAVVEEFQVPYNKLQVIFTSDFSNEERFTGFAAYYVAVDVNECTD 704
G CG+K E + + ++F SD S E R G+ Y A NEC +
Sbjct: 255 VLGPFCGEKAP--------EPISTQSHSVLILFHSDNSGENR--GWRLSYRAAG-NECPE 303
>ref|NP_624302.1| mannan-binding lectin serine protease 1 isoform 2 precursor [Homo
sapiens].
Length = 728
Score = 185 bits (470), Expect = 5e-47
Identities = 91/211 (43%), Positives = 133/211 (63%), Gaps = 3/211 (1%)
Frame = +3
Query: 348 MYGEILSPNYPQAYPNEVEKSWDIEVPEGYGIHLYFTHLDIELSENCAYDSVQIKSGGRE 527
M+G+I SP YP +YP++ E +W+I VP+G+ I LYF H ++E S C YD V++++ +
Sbjct: 27 MFGQIQSPGYPDSYPSDSEVTWNITVPDGFRIKLYFMHFNLESSYLCEYDYVKVETEDQV 86
Query: 528 EGKLCGQKTSKNPKSAVVEEFQVPYNKLQVIFTSDFSNEERFTGFAAYYVAVDVNECTDF 707
CG++T+ ++ E P + + + F SDFSNEERFTGF A+Y+AVDV+EC +
Sbjct: 87 LATFCGRETTDTEQTPGQEVVLSPGSFMSITFRSDFSNEERFTGFDAHYMAVDVDECKER 146
Query: 708 ADS--PCSHFCNNYIGGYFCSCPPEYFLHEDKKNCGVNCSGDVFTTLIGEVASXXXXXXX 881
D C H+C+NYIGGY+CSC Y LH D + C V CS ++FT G + S
Sbjct: 147 EDEELSCDHYCHNYIGGYYCSCRFGYILHTDNRTCRVECSDNLFTQRTGVITSPDFPNPY 206
Query: 882 XENSRCDYQILLEEGFQVVVTMRRKD-FDVE 971
++S C Y I LEEGF +V ++ +D FD+E
Sbjct: 207 PKSSECLYTIELEEGF--MVNLQFEDIFDIE 235
Score = 55.8 bits (133), Expect = 6e-08
Identities = 40/120 (33%), Positives = 58/120 (48%), Gaps = 3/120 (2%)
Frame = +3
Query: 354 GEILSPNYPQAYPNEVEKSWDIEVPEGYGIHLYFTHL-DIELSEN--CAYDSVQIKSGGR 524
G I SP++P YP E + IE+ EG+ ++L F + DIE C YD ++IK G +
Sbjct: 195 GVITSPDFPNPYPKSSECLYTIELEEGFMVNLQFEDIFDIEDHPEVPCPYDYIKIKVGPK 254
Query: 525 EEGKLCGQKTSKNPKSAVVEEFQVPYNKLQVIFTSDFSNEERFTGFAAYYVAVDVNECTD 704
G CG+K E + + ++F SD S E R G+ Y A NEC +
Sbjct: 255 VLGPFCGEKAP--------EPISTQSHSVLILFHSDNSGENR--GWRLSYRAAG-NECPE 303
>ref|NP_006601.2| mannan-binding lectin serine protease 2 isoform 1 preproprotein
[Homo sapiens].
Length = 686
Score = 181 bits (460), Expect = 8e-46
Identities = 93/235 (39%), Positives = 134/235 (57%), Gaps = 9/235 (3%)
Frame = +3
Query: 294 MWCIVLLSLLAWVDAEPT-------MYGEILSPNYPQAYPNEVEKSWDIEVPEGYGIHLY 452
M + LL LL A P ++G + SP +P Y N+ E+ W + P GY + LY
Sbjct: 1 MRLLTLLGLLCGSVATPLGPKWPEPVFGRLASPGFPGEYANDQERRWTLTAPPGYRLRLY 60
Query: 453 FTHLDIELSENCAYDSVQIKSGGREEGKLCGQKTSKNPKSAVVEEFQVPYNKLQVIFTSD 632
FTH D+ELS C YD V++ SG + LCGQ+++ ++ + F + L + F SD
Sbjct: 61 FTHFDLELSHLCEYDFVKLSSGAKVLATLCGQESTDTERAPGKDTFYSLGSSLDITFRSD 120
Query: 633 FSNEERFTGFAAYYVAVDVNEC-TDFADSP-CSHFCNNYIGGYFCSCPPEYFLHEDKKNC 806
+SNE+ FTGF A+Y A D++EC ++P C H C+N++GG++CSC Y LH +K+ C
Sbjct: 121 YSNEKPFTGFEAFYAAEDIDECQVAPGEAPTCDHHCHNHLGGFYCSCRAGYVLHRNKRTC 180
Query: 807 GVNCSGDVFTTLIGEVASXXXXXXXXENSRCDYQILLEEGFQVVVTMRRKDFDVE 971
CSG VFT GE++S + S C Y I LEEGF V++ + FDVE
Sbjct: 181 SALCSGQVFTQRSGELSSPEYPRPYPKLSSCTYSISLEEGFSVILDF-VESFDVE 234
Score = 48.9 bits (115), Expect = 8e-06
Identities = 30/112 (26%), Positives = 52/112 (46%), Gaps = 3/112 (2%)
Frame = +3
Query: 354 GEILSPNYPQAYPNEVEKSWDIEVPEGYGIHLYFTH-LDIELSEN--CAYDSVQIKSGGR 524
GE+ SP YP+ YP ++ I + EG+ + L F D+E C YD ++I++
Sbjct: 194 GELSSPEYPRPYPKLSSCTYSISLEEGFSVILDFVESFDVETHPETLCPYDFLKIQTDRE 253
Query: 525 EEGKLCGQKTSKNPKSAVVEEFQVPYNKLQVIFTSDFSNEERFTGFAAYYVA 680
E G CG+ + + N + + F +D S + TG+ +Y +
Sbjct: 254 EHGPFCGK--------TLPHRIETKSNTVTITFVTDESGDH--TGWKIHYTS 295
>ref|NP_001724.3| complement C1r subcomponent precursor [Homo sapiens].
Length = 705
Score = 160 bits (404), Expect = 2e-39
Identities = 83/224 (37%), Positives = 120/224 (53%), Gaps = 12/224 (5%)
Frame = +3
Query: 348 MYGEILSPNYPQAYPNEVEKSWDIEVPEGYGIHLYFTHLDIELSENCAYDSVQIKSGGRE 527
++GE+ SP +P+ YPN E + I VP GY + L F D+E SE C YD V+I + +
Sbjct: 25 LFGEVTSPLFPKPYPNNFETTTVITVPTGYRVKLVFQQFDLEPSEGCFYDYVKISADKKS 84
Query: 528 EGKLCGQKTSKNPKSAVVEEFQVPYNKLQVIFTSDFSNEER-----FTGFAAYYVAVDVN 692
G+ CGQ S +EF NK+ + F +DFSNEE + GF AYY AVD++
Sbjct: 85 LGRFCGQLGSPLGNPPGKKEFMSQGNKMLLTFHTDFSNEENGTIMFYKGFLAYYQAVDLD 144
Query: 693 ECT-------DFADSPCSHFCNNYIGGYFCSCPPEYFLHEDKKNCGVNCSGDVFTTLIGE 851
EC + C H C+NY+GGYFCSC P Y L ED+ +C CS +++T G
Sbjct: 145 ECASRSKLGEEDPQPQCQHLCHNYVGGYFCSCRPGYELQEDRHSCQAECSSELYTEASGY 204
Query: 852 VASXXXXXXXXENSRCDYQILLEEGFQVVVTMRRKDFDVEQPNQ 983
++S + RC+Y I +E G + + + FD++ Q
Sbjct: 205 ISSLEYPRSYPPDLRCNYSIRVERGLTLHLKF-LEPFDIDDHQQ 247
Score = 49.7 bits (117), Expect = 5e-06
Identities = 28/102 (27%), Positives = 49/102 (48%), Gaps = 3/102 (2%)
Frame = +3
Query: 354 GEILSPNYPQAYPNEVEKSWDIEVPEGYGIHLYFTH---LDIELSENCAYDSVQIKSGGR 524
G I S YP++YP ++ ++ I V G +HL F +D +C YD +QI + G+
Sbjct: 203 GYISSLEYPRSYPPDLRCNYSIRVERGLTLHLKFLEPFDIDDHQQVHCPYDQLQIYANGK 262
Query: 525 EEGKLCGQKTSKNPKSAVVEEFQVPYNKLQVIFTSDFSNEER 650
G+ CG++ + N + ++F +D S + R
Sbjct: 263 NIGEFCGKQRP--------PDLDTSSNAVDLLFFTDESGDSR 296
>ref|NP_631947.1| mannan-binding lectin serine protease 2 isoform 2 precursor [Homo
sapiens].
Length = 185
Score = 145 bits (367), Expect = 5e-35
Identities = 70/180 (38%), Positives = 105/180 (58%), Gaps = 9/180 (5%)
Frame = +3
Query: 294 MWCIVLLSLLAWVDAEPT-------MYGEILSPNYPQAYPNEVEKSWDIEVPEGYGIHLY 452
M + LL LL A P ++G + SP +P Y N+ E+ W + P GY + LY
Sbjct: 1 MRLLTLLGLLCGSVATPLGPKWPEPVFGRLASPGFPGEYANDQERRWTLTAPPGYRLRLY 60
Query: 453 FTHLDIELSENCAYDSVQIKSGGREEGKLCGQKTSKNPKSAVVEEFQVPYNKLQVIFTSD 632
FTH D+ELS C YD V++ SG + LCGQ+++ ++ + F + L + F SD
Sbjct: 61 FTHFDLELSHLCEYDFVKLSSGAKVLATLCGQESTDTERAPGKDTFYSLGSSLDITFRSD 120
Query: 633 FSNEERFTGFAAYYVAVDVNEC-TDFADSP-CSHFCNNYIGGYFCSCPPEYFLHEDKKNC 806
+SNE+ FTGF A+Y A D++EC ++P C H C+N++GG++CSC Y LH +K+ C
Sbjct: 121 YSNEKPFTGFEAFYAAEDIDECQVAPGEAPTCDHHCHNHLGGFYCSCRAGYVLHRNKRTC 180
>ref|NP_036597.1| tolloid-like protein 2 precursor [Homo sapiens].
Length = 1015
Score = 108 bits (270), Expect = 8e-24
Identities = 68/198 (34%), Positives = 99/198 (50%), Gaps = 4/198 (2%)
Frame = +3
Query: 354 GEILSPNYPQAYPNEVEKSWDIEVPEGYGIHLYFTHLDIELSENCAYDSVQIKSGGREE- 530
G+I SPNYP Y E W I V EG+ + L F +IE ++CAYD ++++ G EE
Sbjct: 473 GQIQSPNYPDDYRPSKECVWRITVSEGFHVGLTFQAFEIERHDSCAYDYLEVRDGPTEES 532
Query: 531 ---GKLCGQKTSKNPKSAVVEEFQVPYNKLQVIFTSDFSNEERFTGFAAYYVAVDVNECT 701
G CG + ++ KS+ N+L + F SD S + GFAA + +V+EC+
Sbjct: 533 ALIGHFCGYEKPEDVKSS--------SNRLWMKFVSDGSINK--AGFAANFFK-EVDECS 581
Query: 702 DFADSPCSHFCNNYIGGYFCSCPPEYFLHEDKKNCGVNCSGDVFTTLIGEVASXXXXXXX 881
C H C N +G Y C+C P Y L DKK C V C G + T L G + S
Sbjct: 582 WPDHGGCEHRCVNTLGSYKCACDPGYELAADKKMCEVACGGFI-TKLNGTITSPGWPKEY 640
Query: 882 XENSRCDYQILLEEGFQV 935
N C +Q++ +++
Sbjct: 641 PTNKNCVWQVVAPAQYRI 658
Score = 93.2 bits (230), Expect = 4e-19
Identities = 60/212 (28%), Positives = 97/212 (45%)
Frame = +3
Query: 354 GEILSPNYPQAYPNEVEKSWDIEVPEGYGIHLYFTHLDIELSENCAYDSVQIKSGGREEG 533
G I SP +P+ YP W + P Y I L F ++E ++ C YD V+++SG +
Sbjct: 629 GTITSPGWPKEYPTNKNCVWQVVAPAQYRISLQFEVFELEGNDVCKYDFVEVRSGLSPDA 688
Query: 534 KLCGQKTSKNPKSAVVEEFQVPYNKLQVIFTSDFSNEERFTGFAAYYVAVDVNECTDFAD 713
KL G+ + + N ++V F SD + +R GF A++ + D +EC +
Sbjct: 689 KLHGRFCGSETPEVITSQ----SNNMRVEFKSDNTVSKR--GFRAHFFS-DKDECAK-DN 740
Query: 714 SPCSHFCNNYIGGYFCSCPPEYFLHEDKKNCGVNCSGDVFTTLIGEVASXXXXXXXXENS 893
C H C N G Y C C Y+LHE+ +C +++ G +AS
Sbjct: 741 GGCQHECVNTFGSYLCRCRNGYWLHENGHDCKEAGCAHKISSVEGTLASPNWPDKYPSRR 800
Query: 894 RCDYQILLEEGFQVVVTMRRKDFDVEQPNQGA 989
C + I G +V +T +F++EQ + A
Sbjct: 801 ECTWNISSTAGHRVKLTF--NEFEIEQHQECA 830
Score = 53.5 bits (127), Expect = 3e-07
Identities = 52/211 (24%), Positives = 81/211 (38%), Gaps = 4/211 (1%)
Frame = +3
Query: 354 GEILSPNYPQAYPNEVEKSWDIEVPEGYGIHLYFTHLDIELSENCAYDSVQIKSGGRE-- 527
G + SPN+P YP+ E +W+I G+ + L F +IE + CAYD +++ G
Sbjct: 785 GTLASPNWPDKYPSRRECTWNISSTAGHRVKLTFNEFEIEQHQECAYDHLEMYDGPDSLA 844
Query: 528 --EGKLCGQKTSKNPKSAVVEEFQVPYNKLQVIFTSDFSNEERFTGFAAYYVAVDVNECT 701
G+ CG SK P V + + + F SD S + + GF A +
Sbjct: 845 PILGRFCG---SKKPDPTVASG-----SSMFLRFYSDASVQRK--GFQAVH--------- 885
Query: 702 DFADSPCSHFCNNYIGGYFCSCPPEYFLHEDKKNCGVNCSGDVFTTLIGEVASXXXXXXX 881
CG +V T + A
Sbjct: 886 -------------------------------STECGGRLKAEVQTKELYSHAQFGDNNYP 914
Query: 882 XENSRCDYQILLEEGFQVVVTMRRKDFDVEQ 974
E +RCD+ I+ E+G+ V +T R F+VE+
Sbjct: 915 SE-ARCDWVIVAEDGYGVELTFR--TFEVEE 942
>ref|NP_006120.1| bone morphogenetic protein 1 isoform 3 precursor [Homo sapiens].
Length = 986
Score = 99.4 bits (246), Expect = 5e-21
Identities = 63/199 (31%), Positives = 93/199 (46%), Gaps = 4/199 (2%)
Frame = +3
Query: 351 YGEILSPNYPQAYPNEVEKSWDIEVPEGYGIHLYFTHLDIELSENCAYDSVQIKSGGREE 530
YG I SPNYP Y W I+V EG+ + L F +IE ++CAYD ++++ G E
Sbjct: 443 YGHIQSPNYPDDYRPSKVCIWRIQVSEGFHVGLTFQSFEIERHDSCAYDYLEVRDGHSES 502
Query: 531 ----GKLCGQKTSKNPKSAVVEEFQVPYNKLQVIFTSDFSNEERFTGFAAYYVAVDVNEC 698
G+ CG + + KS ++L + F SD S + GFA + +V+EC
Sbjct: 503 STLIGRYCGYEKPDDIKST--------SSRLWLKFVSDGSINK--AGFAVNFFK-EVDEC 551
Query: 699 TDFADSPCSHFCNNYIGGYFCSCPPEYFLHEDKKNCGVNCSGDVFTTLIGEVASXXXXXX 878
+ C C N +G Y CSC P Y L DK+ C C G T L G + S
Sbjct: 552 SRPNRGGCEQRCLNTLGSYKCSCDPGYELAPDKRRCEAACGG-FLTKLNGSITSPGWPKE 610
Query: 879 XXENSRCDYQILLEEGFQV 935
N C +Q++ +++
Sbjct: 611 YPPNKNCIWQLVAPTQYRI 629
Score = 88.2 bits (217), Expect = 1e-17
Identities = 56/204 (27%), Positives = 87/204 (42%)
Frame = +3
Query: 354 GEILSPNYPQAYPNEVEKSWDIEVPEGYGIHLYFTHLDIELSENCAYDSVQIKSGGREEG 533
G I SP +P+ YP W + P Y I L F + E ++ C YD V+++SG +
Sbjct: 600 GSITSPGWPKEYPPNKNCIWQLVAPTQYRISLQFDFFETEGNDVCKYDFVEVRSGLTADS 659
Query: 534 KLCGQKTSKNPKSAVVEEFQVPYNKLQVIFTSDFSNEERFTGFAAYYVAVDVNECTDFAD 713
KL G+ + + YN ++V F SD N GF A++ + D +EC+ +
Sbjct: 660 KLHGKFCGSEKPEVITSQ----YNNMRVEFKSD--NTVSKKGFKAHFFS-DKDECSK-DN 711
Query: 714 SPCSHFCNNYIGGYFCSCPPEYFLHEDKKNCGVNCSGDVFTTLIGEVASXXXXXXXXENS 893
C C N G Y C C + LH++K +C T+ G + S
Sbjct: 712 GGCQQDCVNTFGSYECQCRSGFVLHDNKHDCKEAGCDHKVTSTSGTITSPNWPDKYPSKK 771
Query: 894 RCDYQILLEEGFQVVVTMRRKDFD 965
C + I G +V +T D +
Sbjct: 772 ECTWAISSTPGHRVKLTFMEMDIE 795
Score = 56.6 bits (135), Expect = 4e-08
Identities = 44/145 (30%), Positives = 66/145 (45%), Gaps = 9/145 (6%)
Frame = +3
Query: 354 GEILSPNYPQAYPNEVEKSWDIEVPEGYGIHLYFTHLDIELSENCAYDSVQIKSGGREE- 530
G I SPN+P YP++ E +W I G+ + L F +DIE CAYD +++ G +
Sbjct: 756 GTITSPNWPDKYPSKKECTWAISSTPGHRVKLTFMEMDIESQPECAYDHLEVFDGRDAKA 815
Query: 531 ---GKLCGQKTSKNPKSAVVEEFQVPYNKLQVIFTSDFSNEERFTGFAAYYVA-----VD 686
G+ CG SK P+ + +++ + F SD S + + GF A + V
Sbjct: 816 PVLGRFCG---SKKPEPVLATG-----SRMFLRFYSDNSVQRK--GFQASHATECGGQVR 865
Query: 687 VNECTDFADSPCSHFCNNYIGGYFC 761
+ T S NNY GG C
Sbjct: 866 ADVKTKDLYSHAQFGDNNYPGGVDC 890
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 46,130,153
Number of extensions: 1393724
Number of successful extensions: 5965
Number of sequences better than 1.0e-05: 48
Number of HSP's gapped: 5880
Number of HSP's successfully gapped: 93
Length of query: 351
Length of database: 18,297,164
Length adjustment: 103
Effective length of query: 248
Effective length of database: 14,901,872
Effective search space: 3695664256
Effective search space used: 3695664256
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007367
(1054 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001091086.1| complement C1s-A subcomponent [Mus musculus]. 399 e-118
Alignment gi|NP_659187.2| complement C1s-A subcomponent [Mus musculus]. 399 e-118
Alignment gi|NP_776289.2| complement C1s-B subcomponent precursor [Mus mu... 393 e-115
Alignment gi|NP_032581.2| mannan-binding lectin serine protease 1 [Mus mu... 192 4e-49
Alignment gi|NP_001003893.1| mannan-binding lectin serine protease 2 isof... 186 3e-47
Alignment gi|NP_001106827.1| complement C1r-B subcomponent precursor [Mus... 162 4e-40
Alignment gi|NP_075632.3| complement C1r-A subcomponent precursor [Mus mu... 162 5e-40
Alignment gi|NP_034897.1| mannan-binding lectin serine protease 2 isoform... 154 8e-38
Alignment gi|NP_036034.1| tolloid-like protein 2 precursor [Mus musculus]. 108 5e-24
Alignment gi|NP_033416.2| tolloid-like protein 1 precursor [Mus musculus]. 99 7e-21
>ref|NP_001091086.1| complement C1s-A subcomponent [Mus musculus].
Length = 694
Score = 399 bits (1026), Expect(2) = e-118
Identities = 181/232 (78%), Positives = 204/232 (87%)
Frame = +3
Query: 276 MDKLPGMWCIVLLSLLAWVDAEPTMYGEILSPNYPQAYPNEVEKSWDIEVPEGYGIHLYF 455
M K PGMWC+VL SLLA AEPTM+GEILSPNYPQAYPN+V KSWDIEVPEG+GIHLYF
Sbjct: 1 MGKSPGMWCLVLFSLLASFSAEPTMHGEILSPNYPQAYPNDVVKSWDIEVPEGFGIHLYF 60
Query: 456 THLDIELSENCAYDSVQIKSGGREEGKLCGQKTSKNPKSAVVEEFQVPYNKLQVIFTSDF 635
TH+DIE SE+CAYDSVQI SG EEG+LCGQ+TSK+P S ++EEFQ PYNKLQV+FTSDF
Sbjct: 61 THVDIEPSESCAYDSVQIISGDIEEGRLCGQRTSKSPNSPIIEEFQFPYNKLQVVFTSDF 120
Query: 636 SNEERFTGFAAYYVAVDVNECTDFADSPCSHFCNNYIGGYFCSCPPEYFLHEDKKNCGVN 815
SNEERFTGFAAYY A+D+NECTDF D PCSHFCNN+IGGYFCSCPPEYFLH+D +NCGVN
Sbjct: 121 SNEERFTGFAAYYTAIDINECTDFTDVPCSHFCNNFIGGYFCSCPPEYFLHDDMRNCGVN 180
Query: 816 CSGDVFTTLIGEVASXXXXXXXXENSRCDYQILLEEGFQVVVTMRRKDFDVE 971
CSGDVFT LIGE++S ENSRC+YQI L+EGFQVVVTM+R+DFDVE
Sbjct: 181 CSGDVFTALIGEISSPNYPNPYPENSRCEYQIQLQEGFQVVVTMQREDFDVE 232
Score = 43.5 bits (101), Expect(2) = e-118
Identities = 18/27 (66%), Positives = 20/27 (74%)
Frame = +2
Query: 974 AKSGGHCPDSLIFVAGNPQFGSYCGNG 1054
A S G+CPDSL F + N QFG YCGNG
Sbjct: 234 ADSEGNCPDSLTFASKNQQFGPYCGNG 260
>ref|NP_659187.2| complement C1s-A subcomponent [Mus musculus].
Length = 694
Score = 399 bits (1026), Expect(2) = e-118
Identities = 181/232 (78%), Positives = 204/232 (87%)
Frame = +3
Query: 276 MDKLPGMWCIVLLSLLAWVDAEPTMYGEILSPNYPQAYPNEVEKSWDIEVPEGYGIHLYF 455
M K PGMWC+VL SLLA AEPTM+GEILSPNYPQAYPN+V KSWDIEVPEG+GIHLYF
Sbjct: 1 MGKSPGMWCLVLFSLLASFSAEPTMHGEILSPNYPQAYPNDVVKSWDIEVPEGFGIHLYF 60
Query: 456 THLDIELSENCAYDSVQIKSGGREEGKLCGQKTSKNPKSAVVEEFQVPYNKLQVIFTSDF 635
TH+DIE SE+CAYDSVQI SG EEG+LCGQ+TSK+P S ++EEFQ PYNKLQV+FTSDF
Sbjct: 61 THVDIEPSESCAYDSVQIISGDIEEGRLCGQRTSKSPNSPIIEEFQFPYNKLQVVFTSDF 120
Query: 636 SNEERFTGFAAYYVAVDVNECTDFADSPCSHFCNNYIGGYFCSCPPEYFLHEDKKNCGVN 815
SNEERFTGFAAYY A+D+NECTDF D PCSHFCNN+IGGYFCSCPPEYFLH+D +NCGVN
Sbjct: 121 SNEERFTGFAAYYTAIDINECTDFTDVPCSHFCNNFIGGYFCSCPPEYFLHDDMRNCGVN 180
Query: 816 CSGDVFTTLIGEVASXXXXXXXXENSRCDYQILLEEGFQVVVTMRRKDFDVE 971
CSGDVFT LIGE++S ENSRC+YQI L+EGFQVVVTM+R+DFDVE
Sbjct: 181 CSGDVFTALIGEISSPNYPNPYPENSRCEYQIQLQEGFQVVVTMQREDFDVE 232
Score = 43.5 bits (101), Expect(2) = e-118
Identities = 18/27 (66%), Positives = 20/27 (74%)
Frame = +2
Query: 974 AKSGGHCPDSLIFVAGNPQFGSYCGNG 1054
A S G+CPDSL F + N QFG YCGNG
Sbjct: 234 ADSEGNCPDSLTFASKNQQFGPYCGNG 260
>ref|NP_776289.2| complement C1s-B subcomponent precursor [Mus musculus].
Length = 694
Score = 393 bits (1010), Expect(2) = e-115
Identities = 180/232 (77%), Positives = 203/232 (87%)
Frame = +3
Query: 276 MDKLPGMWCIVLLSLLAWVDAEPTMYGEILSPNYPQAYPNEVEKSWDIEVPEGYGIHLYF 455
M K PGMW +VL SLLA AEPTM+GEILSPNYPQAYPN+V KSWDIEVPEG+GIHLYF
Sbjct: 1 MGKSPGMWYLVLFSLLASFSAEPTMHGEILSPNYPQAYPNDVVKSWDIEVPEGFGIHLYF 60
Query: 456 THLDIELSENCAYDSVQIKSGGREEGKLCGQKTSKNPKSAVVEEFQVPYNKLQVIFTSDF 635
TH+DIE SE+CAYDSVQI SGG EEG+LCGQ+TSK+P S ++EEFQ PYNKLQV+FTSDF
Sbjct: 61 THVDIEPSESCAYDSVQIISGGIEEGRLCGQRTSKSPNSPIIEEFQFPYNKLQVVFTSDF 120
Query: 636 SNEERFTGFAAYYVAVDVNECTDFADSPCSHFCNNYIGGYFCSCPPEYFLHEDKKNCGVN 815
S EE+FTGFAAYY A+DVNECTDF D PCSHFCNN+IGGYFCSCPPEYFLH+D +NCGVN
Sbjct: 121 SIEEQFTGFAAYYTAIDVNECTDFTDVPCSHFCNNFIGGYFCSCPPEYFLHDDMRNCGVN 180
Query: 816 CSGDVFTTLIGEVASXXXXXXXXENSRCDYQILLEEGFQVVVTMRRKDFDVE 971
CSGDVFT LIGE++S ENSRC+YQI L+EGFQVVVTM+R+DFDVE
Sbjct: 181 CSGDVFTALIGEISSPNYPNPYPENSRCEYQIQLQEGFQVVVTMQREDFDVE 232
Score = 42.7 bits (99), Expect(2) = e-115
Identities = 18/27 (66%), Positives = 20/27 (74%)
Frame = +2
Query: 974 AKSGGHCPDSLIFVAGNPQFGSYCGNG 1054
A S G+CPDSL F A N QFG YCG+G
Sbjct: 234 ADSEGNCPDSLTFAAKNQQFGPYCGDG 260
>ref|NP_032581.2| mannan-binding lectin serine protease 1 [Mus musculus].
Length = 704
Score = 192 bits (488), Expect = 4e-49
Identities = 97/227 (42%), Positives = 139/227 (61%), Gaps = 3/227 (1%)
Frame = +3
Query: 300 CIVLLSLLAWVDAEPTMYGEILSPNYPQAYPNEVEKSWDIEVPEGYGIHLYFTHLDIELS 479
C+ L + A M+G+I SP YP +YP++ E +W+I VPEG+ I LYF H ++E S
Sbjct: 16 CLALPEVSAHTVELNEMFGQIQSPGYPDSYPSDSEVTWNITVPEGFRIKLYFMHFNLESS 75
Query: 480 ENCAYDSVQIKSGGREEGKLCGQKTSKNPKSAVVEEFQVPYNKLQVIFTSDFSNEERFTG 659
C YD V++++ + CG++T+ ++ E P + V F SDFSNEERFTG
Sbjct: 76 YLCEYDYVKVETEDQVLATFCGRETTDTEQTPGQEVVLSPGTFMSVTFRSDFSNEERFTG 135
Query: 660 FAAYYVAVDVNECTDFADS--PCSHFCNNYIGGYFCSCPPEYFLHEDKKNCGVNCSGDVF 833
F A+Y+AVDV+EC + D C H+C+NYIGGY+CSC Y LH D + C V CSG++F
Sbjct: 136 FDAHYMAVDVDECKEREDEELSCDHYCHNYIGGYYCSCRFGYILHTDNRTCRVECSGNLF 195
Query: 834 TTLIGEVASXXXXXXXXENSRCDYQILLEEGFQVVVTMRRKD-FDVE 971
T G + S ++S C Y I LEEGF +V+++ +D FD+E
Sbjct: 196 TQRTGTITSPDYPNPYPKSSECSYTIDLEEGF--MVSLQFEDIFDIE 240
Score = 63.2 bits (152), Expect = 3e-10
Identities = 42/118 (35%), Positives = 60/118 (50%), Gaps = 3/118 (2%)
Frame = +3
Query: 354 GEILSPNYPQAYPNEVEKSWDIEVPEGYGIHLYFTHL-DIELSEN--CAYDSVQIKSGGR 524
G I SP+YP YP E S+ I++ EG+ + L F + DIE C YD ++IK+G +
Sbjct: 200 GTITSPDYPNPYPKSSECSYTIDLEEGFMVSLQFEDIFDIEDHPEVPCPYDYIKIKAGSK 259
Query: 525 EEGKLCGQKTSKNPKSAVVEEFQVPYNKLQVIFTSDFSNEERFTGFAAYYVAVDVNEC 698
G CG+K+ E + +Q++F SD S E R G+ Y A NEC
Sbjct: 260 VWGPFCGEKSP--------EPISTQTHSVQILFRSDNSGENR--GWRLSYRAAG-NEC 306
>ref|NP_001003893.1| mannan-binding lectin serine protease 2 isoform 1 [Mus musculus].
Length = 685
Score = 186 bits (472), Expect = 3e-47
Identities = 95/228 (41%), Positives = 137/228 (60%), Gaps = 2/228 (0%)
Frame = +3
Query: 294 MWCIVLLSLLAWVDAEPTMYGEILSPNYPQAYPNEVEKSWDIEVPEGYGIHLYFTHLDIE 473
+W +V +LL EP ++G ++SP +P+ Y + ++SW + P GY + LYFTH D+E
Sbjct: 10 LWSLVA-TLLGSKWPEP-VFGRLVSPGFPEKYADHQDRSWTLTAPPGYRLRLYFTHFDLE 67
Query: 474 LSENCAYDSVQIKSGGREEGKLCGQKTSKNPKSAVVEEFQVPYNKLQVIFTSDFSNEERF 653
LS C YD V++ SG + LCGQ+++ ++ + F L+V F SD+SNE+ F
Sbjct: 68 LSYRCEYDFVKLSSGTKVLATLCGQESTDTEQAPGNDTFYSLGPSLKVTFHSDYSNEKPF 127
Query: 654 TGFAAYYVAVDVNEC-TDFADS-PCSHFCNNYIGGYFCSCPPEYFLHEDKKNCGVNCSGD 827
TGF A+Y A DV+EC DS PC H+C+NY+GGY+CSC Y LH++K C CSG
Sbjct: 128 TGFEAFYAAEDVDECRVSLGDSVPCDHYCHNYLGGYYCSCRAGYVLHQNKHTCSALCSGQ 187
Query: 828 VFTTLIGEVASXXXXXXXXENSRCDYQILLEEGFQVVVTMRRKDFDVE 971
VFT G ++S + S C Y I LE+GF V++ + FDVE
Sbjct: 188 VFTGRSGYLSSPEYPQPYPKLSSCTYSIRLEDGFSVILDF-VESFDVE 234
>ref|NP_001106827.1| complement C1r-B subcomponent precursor [Mus musculus].
Length = 706
Score = 162 bits (410), Expect = 4e-40
Identities = 88/231 (38%), Positives = 123/231 (53%), Gaps = 17/231 (7%)
Frame = +3
Query: 294 MWCIVLLSLLAW-----VDAEPTMYGEILSPNYPQAYPNEVEKSWDIEVPEGYGIHLYFT 458
MW LL L + + +YGE+ SP YP+ YP+++E + I VP GY + L F
Sbjct: 1 MWLFALLVTLFYGVEGSIYLPQKLYGEVTSPLYPKPYPSDLETTTVITVPMGYRVKLVFW 60
Query: 459 HLDIELSENCAYDSVQIKSGGREEGKLCGQKTSKNPKSAVVEEFQVPYNKLQVIFTSDFS 638
D+E SE C YD V+I + + G+ CGQ S +EF NK+ + F +DFS
Sbjct: 61 QFDVEPSEGCLYDYVKISADKQTLGRFCGQLDSPLGNPPGSKEFMSQGNKMLLTFHTDFS 120
Query: 639 NEER-----FTGFAAYYVAVDVNECTDFADS-------PCSHFCNNYIGGYFCSCPPEYF 782
NEE + GF AYY AVD++EC +S C H C+NY+GGYFCSC P Y
Sbjct: 121 NEENGTIMFYKGFLAYYQAVDLDECASQPNSVEEGLQPRCQHLCHNYVGGYFCSCHPGYE 180
Query: 783 LHEDKKNCGVNCSGDVFTTLIGEVASXXXXXXXXENSRCDYQILLEEGFQV 935
L +D ++C CS +++T G V+S + RC+Y I +E G V
Sbjct: 181 LQKDGQSCQAECSSELYTEPSGYVSSLEYPQPYPPDLRCNYSIRVERGLTV 231
Score = 52.4 bits (124), Expect = 6e-07
Identities = 39/142 (27%), Positives = 65/142 (45%), Gaps = 4/142 (2%)
Frame = +3
Query: 261 SCSPGMD-KLPGMWCIVLLSLLAWVDAEPTMYGEILSPNYPQAYPNEVEKSWDIEVPEGY 437
SC PG + + G C S + EP+ Y + S YPQ YP ++ ++ I V G
Sbjct: 174 SCHPGYELQKDGQSCQAECSSELYT--EPSGY--VSSLEYPQPYPPDLRCNYSIRVERGL 229
Query: 438 GIHLYFT---HLDIELSENCAYDSVQIKSGGREEGKLCGQKTSKNPKSAVVEEFQVPYNK 608
+HL F +D +C YD +QI + G+ G+ CG++ + N
Sbjct: 230 TVHLKFLDPFEIDDHQQVHCPYDQLQIYANGKNLGEFCGKQRP--------PDLDTSSNA 281
Query: 609 LQVIFTSDFSNEERFTGFAAYY 674
+ ++F +D S + R G+ +Y
Sbjct: 282 VDLLFFTDESGDSR--GWKLHY 301
>ref|NP_075632.3| complement C1r-A subcomponent precursor [Mus musculus].
Length = 707
Score = 162 bits (409), Expect = 5e-40
Identities = 88/231 (38%), Positives = 123/231 (53%), Gaps = 17/231 (7%)
Frame = +3
Query: 294 MWCIVLLSLLAW-----VDAEPTMYGEILSPNYPQAYPNEVEKSWDIEVPEGYGIHLYFT 458
MW LL L + + +YGE+ SP YP+ YP+++E + I VP GY + L F
Sbjct: 1 MWLFALLVTLFYGVEGSIYLPQKLYGEVTSPLYPKPYPSDLETTTVITVPMGYRVKLVFW 60
Query: 459 HLDIELSENCAYDSVQIKSGGREEGKLCGQKTSKNPKSAVVEEFQVPYNKLQVIFTSDFS 638
D+E SE C YD V+I + + G+ CGQ S +EF NK+ + F +DFS
Sbjct: 61 QFDVEPSEGCFYDYVKISADKQTLGRFCGQLDSPLGNPPGSKEFMSQGNKMLLTFHTDFS 120
Query: 639 NEER-----FTGFAAYYVAVDVNECTDFADS-------PCSHFCNNYIGGYFCSCPPEYF 782
NEE + GF AYY AVD++EC +S C H C+NY+GGYFCSC P Y
Sbjct: 121 NEENGTIMFYKGFLAYYQAVDLDECASQPNSVEEGLQPRCQHLCHNYVGGYFCSCHPGYE 180
Query: 783 LHEDKKNCGVNCSGDVFTTLIGEVASXXXXXXXXENSRCDYQILLEEGFQV 935
L +D ++C CS +++T G V+S + RC+Y I +E G V
Sbjct: 181 LQKDGQSCQAECSSELYTEPSGYVSSLEYPQPYPPDLRCNYSIRVERGLTV 231
Score = 52.4 bits (124), Expect = 6e-07
Identities = 39/142 (27%), Positives = 65/142 (45%), Gaps = 4/142 (2%)
Frame = +3
Query: 261 SCSPGMD-KLPGMWCIVLLSLLAWVDAEPTMYGEILSPNYPQAYPNEVEKSWDIEVPEGY 437
SC PG + + G C S + EP+ Y + S YPQ YP ++ ++ I V G
Sbjct: 174 SCHPGYELQKDGQSCQAECSSELYT--EPSGY--VSSLEYPQPYPPDLRCNYSIRVERGL 229
Query: 438 GIHLYFT---HLDIELSENCAYDSVQIKSGGREEGKLCGQKTSKNPKSAVVEEFQVPYNK 608
+HL F +D +C YD +QI + G+ G+ CG++ + N
Sbjct: 230 TVHLKFLDPFEIDDHQQVHCPYDQLQIYANGKNLGEFCGKQRP--------PDLDTSSNA 281
Query: 609 LQVIFTSDFSNEERFTGFAAYY 674
+ ++F +D S + R G+ +Y
Sbjct: 282 VDLLFFTDESGDSR--GWKLHY 301
>ref|NP_034897.1| mannan-binding lectin serine protease 2 isoform 2 [Mus musculus].
Length = 185
Score = 154 bits (390), Expect = 8e-38
Identities = 74/173 (42%), Positives = 109/173 (63%), Gaps = 2/173 (1%)
Frame = +3
Query: 294 MWCIVLLSLLAWVDAEPTMYGEILSPNYPQAYPNEVEKSWDIEVPEGYGIHLYFTHLDIE 473
+W +V +LL EP ++G ++SP +P+ Y + ++SW + P GY + LYFTH D+E
Sbjct: 10 LWSLVA-TLLGSKWPEP-VFGRLVSPGFPEKYADHQDRSWTLTAPPGYRLRLYFTHFDLE 67
Query: 474 LSENCAYDSVQIKSGGREEGKLCGQKTSKNPKSAVVEEFQVPYNKLQVIFTSDFSNEERF 653
LS C YD V++ SG + LCGQ+++ ++ + F L+V F SD+SNE+ F
Sbjct: 68 LSYRCEYDFVKLSSGTKVLATLCGQESTDTEQAPGNDTFYSLGPSLKVTFHSDYSNEKPF 127
Query: 654 TGFAAYYVAVDVNEC-TDFADS-PCSHFCNNYIGGYFCSCPPEYFLHEDKKNC 806
TGF A+Y A DV+EC DS PC H+C+NY+GGY+CSC Y LH++K C
Sbjct: 128 TGFEAFYAAEDVDECRVSLGDSVPCDHYCHNYLGGYYCSCRAGYVLHQNKHTC 180
>ref|NP_036034.1| tolloid-like protein 2 precursor [Mus musculus].
Length = 1012
Score = 108 bits (271), Expect = 5e-24
Identities = 71/210 (33%), Positives = 105/210 (50%), Gaps = 4/210 (1%)
Frame = +3
Query: 354 GEILSPNYPQAYPNEVEKSWDIEVPEGYGIHLYFTHLDIELSENCAYDSVQIKSGGREE- 530
G+I SPNYP Y E W I VP+G+ + L F +IE ++CAYD ++I+ G E+
Sbjct: 470 GQIQSPNYPDDYRPSKECVWRITVPDGFHVGLTFQSFEIERHDSCAYDYLEIRDGPTEDS 529
Query: 531 ---GKLCGQKTSKNPKSAVVEEFQVPYNKLQVIFTSDFSNEERFTGFAAYYVAVDVNECT 701
G CG + + KS+ N+L V F SD S + GFAA + +V+EC+
Sbjct: 530 TLIGHFCGYEKPEAVKSSA--------NRLWVKFVSDGSINK--AGFAANFFK-EVDECS 578
Query: 702 DFADSPCSHFCNNYIGGYFCSCPPEYFLHEDKKNCGVNCSGDVFTTLIGEVASXXXXXXX 881
C C N +G Y C+C P Y L DKK C V C G + T L G + S
Sbjct: 579 WPDHGGCEQRCVNTLGSYTCACDPGYELAADKKTCEVACGGFI-TKLNGTITSPGWPKEY 637
Query: 882 XENSRCDYQILLEEGFQVVVTMRRKDFDVE 971
N C +Q++ Q ++++ + F++E
Sbjct: 638 PTNKNCVWQVVAP--VQYRISLQFEAFELE 665
Score = 87.0 bits (214), Expect = 2e-17
Identities = 61/216 (28%), Positives = 94/216 (43%), Gaps = 4/216 (1%)
Frame = +3
Query: 354 GEILSPNYPQAYPNEVEKSWDIEVPEGYGIHLYFTHLDIELSENCAYDSVQIKSG----G 521
G I SP +P+ YP W + P Y I L F ++E ++ C YD V+++SG
Sbjct: 626 GTITSPGWPKEYPTNKNCVWQVVAPVQYRISLQFEAFELEGNDVCKYDFVEVRSGLSPDA 685
Query: 522 REEGKLCGQKTSKNPKSAVVEEFQVPYNKLQVIFTSDFSNEERFTGFAAYYVAVDVNECT 701
+ GK CG +T E N ++V F SD + +R GF A++ + D +EC
Sbjct: 686 KLHGKFCGSETP--------EVITSQSNNMRVEFKSDNTVSKR--GFRAHFFS-DKDECA 734
Query: 702 DFADSPCSHFCNNYIGGYFCSCPPEYFLHEDKKNCGVNCSGDVFTTLIGEVASXXXXXXX 881
+ C C N G Y C C Y LHE+ +C ++ G + S
Sbjct: 735 K-DNGGCQQECVNTFGSYLCRCRNGYRLHENGHDCKEAGCAYKISSAEGTLMSPNWPDKY 793
Query: 882 XENSRCDYQILLEEGFQVVVTMRRKDFDVEQPNQGA 989
C + I G +V +T +F++EQ + A
Sbjct: 794 PSRKECTWNISSTAGHRVKITF--SEFEIEQHQECA 827
Score = 53.5 bits (127), Expect = 3e-07
Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Frame = +3
Query: 354 GEILSPNYPQAYPNEVEKSWDIEVPEGYGIHLYFTHLDIELSENCAYDSVQIKSGGRE-- 527
G ++SPN+P YP+ E +W+I G+ + + F+ +IE + CAYD +++ G
Sbjct: 782 GTLMSPNWPDKYPSRKECTWNISSTAGHRVKITFSEFEIEQHQECAYDHLELYDGTDSLA 841
Query: 528 --EGKLCGQK 551
G+ CG K
Sbjct: 842 PILGRFCGSK 851
Score = 49.3 bits (116), Expect = 5e-06
Identities = 38/114 (33%), Positives = 54/114 (47%), Gaps = 4/114 (3%)
Frame = +3
Query: 354 GEILSPNYPQAYPNEVEKSWDIEVPEGYGIHLYFTHLDIELSENCAYDSVQIKSGGREE- 530
G +P +P YP+ W I V G I L FT +D+ S C YD V+I+ G +
Sbjct: 357 GNFSAPGFPNGYPSYSHCVWRISVTPGEKIILNFTSMDLFKSRLCWYDYVEIRDGYWRKA 416
Query: 531 ---GKLCGQKTSKNPKSAVVEEFQVPYNKLQVIFTSDFSNEERFTGFAAYYVAV 683
G+ CG K P+S V + ++L V F S S+ + GF A Y A+
Sbjct: 417 PLLGRFCGDKI---PESLVSSD-----SRLWVEFRSSSSSLGK--GFFAVYEAM 460
>ref|NP_033416.2| tolloid-like protein 1 precursor [Mus musculus].
Length = 1013
Score = 98.6 bits (244), Expect = 7e-21
Identities = 60/196 (30%), Positives = 93/196 (47%)
Frame = +3
Query: 354 GEILSPNYPQAYPNEVEKSWDIEVPEGYGIHLYFTHLDIELSENCAYDSVQIKSGGREEG 533
G+I SPNYP Y E W I V EGY + L F +IE ++CAYD ++++ G E
Sbjct: 471 GQIQSPNYPDDYRPMKECVWKIMVSEGYHVGLTFQAFEIERHDSCAYDHLEVRDGASENS 530
Query: 534 KLCGQKTSKNPKSAVVEEFQVPYNKLQVIFTSDFSNEERFTGFAAYYVAVDVNECTDFAD 713
L G+ + E+ + N L + F SD + + GFAA + + +EC
Sbjct: 531 PLIGRFCGYDKP----EDIRSTSNTLWMKFVSDGTVNK--AGFAANFFK-EEDECAKPDR 583
Query: 714 SPCSHFCNNYIGGYFCSCPPEYFLHEDKKNCGVNCSGDVFTTLIGEVASXXXXXXXXENS 893
C C N +G Y C+C P Y L D+++C C G + T L G + + N
Sbjct: 584 GGCEQRCLNTLGSYQCACEPGYELGPDRRSCEAACGG-LLTKLNGTITTPGWPKEYPPNK 642
Query: 894 RCDYQILLEEGFQVVV 941
C +Q++ +++ V
Sbjct: 643 NCVWQVIAPSQYRISV 658
Score = 86.7 bits (213), Expect = 3e-17
Identities = 74/270 (27%), Positives = 113/270 (41%), Gaps = 1/270 (0%)
Frame = +3
Query: 183 CVCWTNTQPGTSLAPKSRGAKSQDQKSCSPGMDKLPGMWCIVLLSLLAWVDAEPTMYGEI 362
C C +PG L P D++SC C LL+ L G I
Sbjct: 599 CAC----EPGYELGP--------DRRSCEAA--------CGGLLTKLN---------GTI 629
Query: 363 LSPNYPQAYPNEVEKSWDIEVPEGYGIHLYFTHLDIELSENCAYDSVQIKSGGREEGKLC 542
+P +P+ YP W + P Y I + F ++E +E C YD V+I SG E KL
Sbjct: 630 TTPGWPKEYPPNKNCVWQVIAPSQYRISVKFEFFELEGNEVCKYDYVEIWSGLSSESKLH 689
Query: 543 GQKTSKNPKSAVVEEFQVPYNKLQVIFTSDFSNEERFTGFAAYYVAVDVNECTDFADSPC 722
G+ + + F N +++ F SD N GF A++ + D +EC+ + C
Sbjct: 690 GKFCGADIPEVMTSHF----NNMRIEFKSD--NTVSKKGFKAHFFS-DKDECSK-DNGGC 741
Query: 723 SHFCNNYIGGYFCSCPPEYFLHEDKKNC-GVNCSGDVFTTLIGEVASXXXXXXXXENSRC 899
H C N +G Y C C + LHE+K +C C + + G + S C
Sbjct: 742 QHECVNTMGSYTCQCRNGFVLHENKHDCKEAECEQKIHSP-SGLITSPNWPDKYPSRKEC 800
Query: 900 DYQILLEEGFQVVVTMRRKDFDVEQPNQGA 989
+ I G + +T+ +F+VEQ + A
Sbjct: 801 TWVISAIPGHR--ITLAFNEFEVEQHQECA 828
Score = 58.5 bits (140), Expect = 8e-09
Identities = 36/109 (33%), Positives = 54/109 (49%), Gaps = 4/109 (3%)
Frame = +3
Query: 354 GEILSPNYPQAYPNEVEKSWDIEVPEGYGIHLYFTHLDIELSENCAYDSVQIKSGGREE- 530
G I SPN+P YP+ E +W I G+ I L F ++E + CAYD ++I G E+
Sbjct: 783 GLITSPNWPDKYPSRKECTWVISAIPGHRITLAFNEFEVEQHQECAYDHLEIFDGETEKS 842
Query: 531 ---GKLCGQKTSKNPKSAVVEEFQVPYNKLQVIFTSDFSNEERFTGFAA 668
G+LCG K + + N++ + F SD S + + GF A
Sbjct: 843 PILGRLCGSK--------IPDPLMATGNEMFIRFISDASVQRK--GFQA 881
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 39,046,072
Number of extensions: 1166984
Number of successful extensions: 4822
Number of sequences better than 1.0e-05: 39
Number of HSP's gapped: 4754
Number of HSP's successfully gapped: 71
Length of query: 351
Length of database: 15,617,559
Length adjustment: 102
Effective length of query: 249
Effective length of database: 12,553,887
Effective search space: 3125917863
Effective search space used: 3125917863
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007367
(1054 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001005349.1| complement C1s subcomponent precursor [Sus s... 461 e-140
Alignment gi|XP_003361612.1| PREDICTED: mannan-binding lectin serine prot... 191 6e-49
Alignment gi|NP_001171876.1| mannan-binding lectin serine protease 1 [Sus... 191 6e-49
Alignment gi|NP_001157120.1| mannan-binding lectin serine protease 2 [Sus... 174 6e-44
Alignment gi|XP_003126565.2| PREDICTED: LOW QUALITY PROTEIN: complement C... 158 5e-39
Alignment gi|XP_001928510.1| PREDICTED: tolloid-like protein 2 [Sus scrof... 104 9e-23
Alignment gi|XP_003359075.1| PREDICTED: bone morphogenetic protein 1 isof... 97 2e-20
Alignment gi|XP_001927808.2| PREDICTED: bone morphogenetic protein 1 isof... 97 2e-20
Alignment gi|XP_003129040.2| PREDICTED: tolloid-like protein 1 [Sus scrof... 96 3e-20
Alignment gi|XP_003126570.2| PREDICTED: LOW QUALITY PROTEIN: complement C... 73 2e-13
>ref|NP_001005349.1| complement C1s subcomponent precursor [Sus scrofa].
Length = 687
Score = 461 bits (1186), Expect(2) = e-140
Identities = 218/231 (94%), Positives = 220/231 (95%)
Frame = +3
Query: 294 MWCIVLLSLLAWVDAEPTMYGEILSPNYPQAYPNEVEKSWDIEVPEGYGIHLYFTHLDIE 473
MWCIVLLSLLAWVDAEPTMYGEILSPNYPQAYPNEVEKSWDIEVPEGYGIHLYFTHLDIE
Sbjct: 1 MWCIVLLSLLAWVDAEPTMYGEILSPNYPQAYPNEVEKSWDIEVPEGYGIHLYFTHLDIE 60
Query: 474 LSENCAYDSVQIKSGGREEGKLCGQKTSKNPKSAVVEEFQVPYNKLQVIFTSDFSNEERF 653
LSENCAYDSVQIKSGGREEGKLCGQKTSKNPKSAVVEEFQVPYNKLQVIFTSDFSNEERF
Sbjct: 61 LSENCAYDSVQIKSGGREEGKLCGQKTSKNPKSAVVEEFQVPYNKLQVIFTSDFSNEERF 120
Query: 654 TGFAAYYVAVDVNECTDFADSPCSHFCNNYIGGYFCSCPPEYFLHEDKKNCGVNCSGDVF 833
TGFAAYYVAVDVNECTDFADSPCSHFCNNYIGGYFCSCPPEYFLHEDKKNCGVNCSGDVF
Sbjct: 121 TGFAAYYVAVDVNECTDFADSPCSHFCNNYIGGYFCSCPPEYFLHEDKKNCGVNCSGDVF 180
Query: 834 TTLIGEVASXXXXXXXXENSRCDYQILLEEGFQVVVTMRRKDFDVEQPNQG 986
TTLIGEVAS ENSRCDYQILLEEGFQVVVTMRR+DFDVE + G
Sbjct: 181 TTLIGEVASPNYPNPYPENSRCDYQILLEEGFQVVVTMRREDFDVEPADSG 231
Score = 57.0 bits (136), Expect(2) = e-140
Identities = 24/27 (88%), Positives = 24/27 (88%)
Frame = +2
Query: 974 AKSGGHCPDSLIFVAGNPQFGSYCGNG 1054
A SGGHCPDSLIFVAGN QFG YCGNG
Sbjct: 228 ADSGGHCPDSLIFVAGNQQFGPYCGNG 254
>ref|XP_003361612.1| PREDICTED: mannan-binding lectin serine protease 1-like [Sus
scrofa].
Length = 264
Score = 191 bits (485), Expect = 6e-49
Identities = 97/227 (42%), Positives = 140/227 (61%), Gaps = 3/227 (1%)
Frame = +3
Query: 300 CIVLLSLLAWVDAEPTMYGEILSPNYPQAYPNEVEKSWDIEVPEGYGIHLYFTHLDIELS 479
C LL A V M+G+I SP YP +YP++ E +W+I VPEG+ I LYF H ++E S
Sbjct: 11 CFSLLKASAHVVELNNMFGQIQSPGYPDSYPSDSEVTWNITVPEGFRIKLYFMHFNLESS 70
Query: 480 ENCAYDSVQIKSGGREEGKLCGQKTSKNPKSAVVEEFQVPYNKLQVIFTSDFSNEERFTG 659
C YD V++++ + CG++T+ ++ E P + + + F SDFSNEER+TG
Sbjct: 71 YLCEYDYVKVETEDQVLATFCGKETTDTEQTPGQEVVFSPGSFMSITFRSDFSNEERYTG 130
Query: 660 FAAYYVAVDVNECTDFADS--PCSHFCNNYIGGYFCSCPPEYFLHEDKKNCGVNCSGDVF 833
F A+Y+AVDV+ECT+ D C H+C+NYIGGY+CSC Y LH D + C V CS ++F
Sbjct: 131 FDAHYMAVDVDECTEREDEELSCDHYCHNYIGGYYCSCRFGYILHTDNRTCRVECSDNLF 190
Query: 834 TTLIGEVASXXXXXXXXENSRCDYQILLEEGFQVVVTMRRKD-FDVE 971
T G + S ++S C Y I LEEGF +V+++ +D FD+E
Sbjct: 191 TQRTGVITSPDYPSPYPKSSECLYTIELEEGF--MVSLQFEDIFDIE 235
>ref|NP_001171876.1| mannan-binding lectin serine protease 1 [Sus scrofa].
Length = 728
Score = 191 bits (485), Expect = 6e-49
Identities = 97/227 (42%), Positives = 140/227 (61%), Gaps = 3/227 (1%)
Frame = +3
Query: 300 CIVLLSLLAWVDAEPTMYGEILSPNYPQAYPNEVEKSWDIEVPEGYGIHLYFTHLDIELS 479
C LL A V M+G+I SP YP +YP++ E +W+I VPEG+ I LYF H ++E S
Sbjct: 11 CFSLLKASAHVVELNNMFGQIQSPGYPDSYPSDSEVTWNITVPEGFRIKLYFMHFNLESS 70
Query: 480 ENCAYDSVQIKSGGREEGKLCGQKTSKNPKSAVVEEFQVPYNKLQVIFTSDFSNEERFTG 659
C YD V++++ + CG++T+ ++ E P + + + F SDFSNEER+TG
Sbjct: 71 YLCEYDYVKVETEDQVLATFCGKETTDTEQTPGQEVVFSPGSFMSITFRSDFSNEERYTG 130
Query: 660 FAAYYVAVDVNECTDFADS--PCSHFCNNYIGGYFCSCPPEYFLHEDKKNCGVNCSGDVF 833
F A+Y+AVDV+ECT+ D C H+C+NYIGGY+CSC Y LH D + C V CS ++F
Sbjct: 131 FDAHYMAVDVDECTEREDEELSCDHYCHNYIGGYYCSCRFGYILHTDNRTCRVECSDNLF 190
Query: 834 TTLIGEVASXXXXXXXXENSRCDYQILLEEGFQVVVTMRRKD-FDVE 971
T G + S ++S C Y I LEEGF +V+++ +D FD+E
Sbjct: 191 TQRTGVITSPDYPSPYPKSSECLYTIELEEGF--MVSLQFEDIFDIE 235
Score = 59.7 bits (143), Expect = 3e-09
Identities = 42/118 (35%), Positives = 58/118 (49%), Gaps = 3/118 (2%)
Frame = +3
Query: 354 GEILSPNYPQAYPNEVEKSWDIEVPEGYGIHLYFTHL-DIE--LSENCAYDSVQIKSGGR 524
G I SP+YP YP E + IE+ EG+ + L F + DIE +C YD ++IK+G +
Sbjct: 195 GVITSPDYPSPYPKSSECLYTIELEEGFMVSLQFEDIFDIEDHPEVSCPYDYIKIKAGPK 254
Query: 525 EEGKLCGQKTSKNPKSAVVEEFQVPYNKLQVIFTSDFSNEERFTGFAAYYVAVDVNEC 698
G CG+K E + +Q+ F SD S E R G+ Y A NEC
Sbjct: 255 LLGPFCGEKAP--------EPINTQSHSIQIQFRSDNSGENR--GWRLLYRATG-NEC 301
>ref|NP_001157120.1| mannan-binding lectin serine protease 2 [Sus scrofa].
Length = 685
Score = 174 bits (442), Expect = 6e-44
Identities = 92/235 (39%), Positives = 132/235 (56%), Gaps = 9/235 (3%)
Frame = +3
Query: 294 MWCIVLLSLLAWVDAEPT-------MYGEILSPNYPQAYPNEVEKSWDIEVPEGYGIHLY 452
M +V L LLA + A P+ ++G + SP +P+ Y N E+ W + P GY + LY
Sbjct: 1 MRLLVFLGLLAGLAATPSGPQWPKPVFGRLASPGFPEKYANNQEQRWTLTAPPGYRLRLY 60
Query: 453 FTHLDIELSENCAYDSVQIKSGGREEGKLCGQKTSKNPKSAVVEEFQVPYNKLQVIFTSD 632
FTH +E S C YD V++ SG + LCGQ+++ ++ + F + L V F SD
Sbjct: 61 FTHFHLEPSYLCEYDFVKLSSGTKVLATLCGQESTDTERAPGNDSFYSDGSSLDVTFCSD 120
Query: 633 FSNEERFTGFAAYYVAVDVNEC-TDFADSP-CSHFCNNYIGGYFCSCPPEYFLHEDKKNC 806
+SNE+ FTGF A+Y A D++EC ++P C H C+N++GG++CSC Y LH +K C
Sbjct: 121 YSNEKPFTGFEAFYSAEDIDECQVPPGEAPACDHHCHNHLGGFYCSCRAGYVLHRNKHTC 180
Query: 807 GVNCSGDVFTTLIGEVASXXXXXXXXENSRCDYQILLEEGFQVVVTMRRKDFDVE 971
CSG VFT G ++S + S C Y I LEEGF V + + FDVE
Sbjct: 181 SALCSGQVFTARSGVLSSPEYPQPYPKLSNCTYSIRLEEGFSVSLDF-VESFDVE 234
Score = 48.1 bits (113), Expect = 8e-06
Identities = 35/128 (27%), Positives = 55/128 (42%), Gaps = 3/128 (2%)
Frame = +3
Query: 354 GEILSPNYPQAYPNEVEKSWDIEVPEGYGIHLYFTH-LDIEL--SENCAYDSVQIKSGGR 524
G + SP YPQ YP ++ I + EG+ + L F D+E C YDS++I++
Sbjct: 194 GVLSSPEYPQPYPKLSNCTYSIRLEEGFSVSLDFVESFDVESHPETQCPYDSLEIQTDKE 253
Query: 525 EEGKLCGQKTSKNPKSAVVEEFQVPYNKLQVIFTSDFSNEERFTGFAAYYVAVDVNECTD 704
+ G CG+ + + + + V F +D S E TG+ Y + C D
Sbjct: 254 KYGPFCGR--------TLPPRIETKSSTVTVTFVTDQSGEH--TGWRIRYSST-AQPCPD 302
Query: 705 FADSPCSH 728
P H
Sbjct: 303 PVAPPNGH 310
>ref|XP_003126565.2| PREDICTED: LOW QUALITY PROTEIN: complement C1r subcomponent [Sus
scrofa].
Length = 749
Score = 158 bits (399), Expect = 5e-39
Identities = 95/260 (36%), Positives = 133/260 (51%), Gaps = 19/260 (7%)
Frame = +3
Query: 213 TSLAPKSRGAKSQDQKSCSPGMDKLPGMWCIVLL------SLLAWVDAEPTMYGEILSPN 374
+++ P R +++D + G++K W + LL SL ++GE+ SP
Sbjct: 20 SAILPPCRCRRTRDPQR---GLEK--SGWLVYLLVPGLFYSLGGTTPLPQKLFGEVTSPR 74
Query: 375 YPQAYPNEVEKSWDIEVPEGYGIHLYFTHLDIELSENCAYDSVQIKSGGREEGKLCGQKT 554
YP+ YPN E + I VP GY + L F D+E SE C YD V+I + + G+ CGQ
Sbjct: 75 YPKPYPNNFETTTVITVPTGYRVKLVFWQFDLEPSEGCFYDYVKISADKKTLGRFCGQLG 134
Query: 555 SKNPKSAVVEEFQVPYNKLQVIFTSDFSNEER-----FTGFAAYYVAVDVNECT------ 701
S +EF NK+ + F +DFSNEE + GF AYY AVD++EC
Sbjct: 135 SPLGNPPGRKEFMSQGNKMLLTFHTDFSNEENGTIMFYKGFLAYYQAVDLDECAFQHNSG 194
Query: 702 -DFADSP-CSHFCNNYIGGYFCSCPPEYFLHEDKKNCGVNCSGDVFTTLIGEVASXXXXX 875
D A P C H C+NYIGGYFCSC Y L ED +C CS ++FT G ++S
Sbjct: 195 EDNAQQPRCQHLCHNYIGGYFCSCHLGYELQEDGHSCQAECSRELFTEPSGYISSLEYPQ 254
Query: 876 XXXENSRCDYQILLEEGFQV 935
+ RC+Y I +E G +
Sbjct: 255 PYPPDLRCNYSIRVEWGLTI 274
Score = 48.5 bits (114), Expect = 6e-06
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Frame = +3
Query: 354 GEILSPNYPQAYPNEVEKSWDIEVPEGYGIHLYFT---HLDIELSENCAYDSVQIKSGGR 524
G I S YPQ YP ++ ++ I V G IHL F +D +C YD +Q+ + GR
Sbjct: 245 GYISSLEYPQPYPPDLRCNYSIRVEWGLTIHLKFLEPFEIDDHQQVHCPYDQLQVYASGR 304
Query: 525 EEGKLCGQK 551
G+ CG +
Sbjct: 305 NIGEFCGSQ 313
>ref|XP_001928510.1| PREDICTED: tolloid-like protein 2 [Sus scrofa].
Length = 1020
Score = 104 bits (259), Expect = 9e-23
Identities = 67/198 (33%), Positives = 97/198 (48%), Gaps = 4/198 (2%)
Frame = +3
Query: 354 GEILSPNYPQAYPNEVEKSWDIEVPEGYGIHLYFTHLDIELSENCAYDSVQIKSGGREE- 530
G+I SPNYP Y E W I V EG+ + L F +IE ++CAYD ++I+ G EE
Sbjct: 478 GQIQSPNYPDDYRPSKECVWKITVSEGFHVGLSFQAFEIERHDSCAYDYLEIRDGPTEES 537
Query: 531 ---GKLCGQKTSKNPKSAVVEEFQVPYNKLQVIFTSDFSNEERFTGFAAYYVAVDVNECT 701
G CG + ++ KS+ N++ + F SD S + GFAA + +V+EC+
Sbjct: 538 ALIGHFCGYEKPEDVKSS--------SNRMWMKFVSDGSINK--AGFAANFFK-EVDECS 586
Query: 702 DFADSPCSHFCNNYIGGYFCSCPPEYFLHEDKKNCGVNCSGDVFTTLIGEVASXXXXXXX 881
C C N +G Y C C P Y L DKK C V C G + T L G + S
Sbjct: 587 WPDHGGCEQRCVNTLGSYKCVCDPGYELAADKKACEVACGGFI-TKLNGTITSPGWPKEY 645
Query: 882 XENSRCDYQILLEEGFQV 935
N C +Q++ +++
Sbjct: 646 PTNKNCVWQVVAPAQYRI 663
Score = 92.0 bits (227), Expect = 5e-19
Identities = 62/216 (28%), Positives = 98/216 (45%), Gaps = 4/216 (1%)
Frame = +3
Query: 354 GEILSPNYPQAYPNEVEKSWDIEVPEGYGIHLYFTHLDIELSENCAYDSVQIKSG----G 521
G I SP +P+ YP W + P Y I L F ++E ++ C YD V+++SG
Sbjct: 634 GTITSPGWPKEYPTNKNCVWQVVAPAQYRISLQFEVFELEGNDVCKYDFVEVRSGLSPDA 693
Query: 522 REEGKLCGQKTSKNPKSAVVEEFQVPYNKLQVIFTSDFSNEERFTGFAAYYVAVDVNECT 701
R GK CG S + E N +++ F SD + +R GF A++ + D +EC
Sbjct: 694 RLHGKFCG--------SEMPEVITSQSNNMRLEFKSDNTVSKR--GFRAHFFS-DKDECA 742
Query: 702 DFADSPCSHFCNNYIGGYFCSCPPEYFLHEDKKNCGVNCSGDVFTTLIGEVASXXXXXXX 881
+ C H C N +G Y C C Y LHE++++C ++ G + S
Sbjct: 743 K-DNGGCQHECVNTVGSYLCRCRNGYRLHENQQDCKEAGCAHKISSAEGTLVSPNWPDKY 801
Query: 882 XENSRCDYQILLEEGFQVVVTMRRKDFDVEQPNQGA 989
C + I G +V +T +F++EQ + A
Sbjct: 802 PSRRECTWNISSTAGHRVKLTF--NEFEIEQHQECA 835
Score = 56.6 bits (135), Expect = 2e-08
Identities = 37/111 (33%), Positives = 54/111 (48%), Gaps = 4/111 (3%)
Frame = +3
Query: 354 GEILSPNYPQAYPNEVEKSWDIEVPEGYGIHLYFTHLDIELSENCAYDSVQIKSG----G 521
G ++SPN+P YP+ E +W+I G+ + L F +IE + CAYD +++ G
Sbjct: 790 GTLVSPNWPDKYPSRRECTWNISSTAGHRVKLTFNEFEIEQHQECAYDHLELYDGPDSLA 849
Query: 522 REEGKLCGQKTSKNPKSAVVEEFQVPYNKLQVIFTSDFSNEERFTGFAAYY 674
G+ CG SK P V N L + F SD S + R GF A +
Sbjct: 850 PVLGRFCG---SKKPDPVVASG-----NSLFLRFYSDASVQRR--GFQAMH 890
>ref|XP_003359075.1| PREDICTED: bone morphogenetic protein 1 isoform 2 [Sus scrofa].
Length = 737
Score = 96.7 bits (239), Expect = 2e-20
Identities = 62/198 (31%), Positives = 92/198 (46%), Gaps = 4/198 (2%)
Frame = +3
Query: 354 GEILSPNYPQAYPNEVEKSWDIEVPEGYGIHLYFTHLDIELSENCAYDSVQIKSGGREE- 530
G I SPNYP Y W I+V EG+ + L F +IE ++CAYD ++++ G E
Sbjct: 451 GHIQSPNYPDDYRPSKVCIWRIQVSEGFHVGLTFQSFEIERHDSCAYDYLEVRDGHSESS 510
Query: 531 ---GKLCGQKTSKNPKSAVVEEFQVPYNKLQVIFTSDFSNEERFTGFAAYYVAVDVNECT 701
G+ CG + + KS ++L + F SD S + GFA + +V+EC+
Sbjct: 511 TLIGRYCGYEKPDDIKST--------SSRLWLKFVSDGSINK--AGFAVNFFK-EVDECS 559
Query: 702 DFADSPCSHFCNNYIGGYFCSCPPEYFLHEDKKNCGVNCSGDVFTTLIGEVASXXXXXXX 881
C C N +G Y CSC P Y L DK+ C C G T L G + S
Sbjct: 560 RPNRGGCEQRCLNTLGSYKCSCDPGYELAPDKRRCEAACGG-FLTKLNGSITSPGWPKEY 618
Query: 882 XENSRCDYQILLEEGFQV 935
N C +Q++ +++
Sbjct: 619 PPNKNCIWQLVAPTQYRI 636
Score = 57.0 bits (136), Expect = 2e-08
Identities = 33/107 (30%), Positives = 50/107 (46%)
Frame = +3
Query: 354 GEILSPNYPQAYPNEVEKSWDIEVPEGYGIHLYFTHLDIELSENCAYDSVQIKSGGREEG 533
G I SP +P+ YP W + P Y I L F + E ++ C YD V+++SG +
Sbjct: 607 GSITSPGWPKEYPPNKNCIWQLVAPTQYRISLQFDFFETEGNDVCKYDFVEVRSGLTADS 666
Query: 534 KLCGQKTSKNPKSAVVEEFQVPYNKLQVIFTSDFSNEERFTGFAAYY 674
KL G+ + + YN ++V F SD N GF A++
Sbjct: 667 KLHGKFCGSEKPEVITSQ----YNNMRVEFKSD--NTVSKKGFKAHF 707
>ref|XP_001927808.2| PREDICTED: bone morphogenetic protein 1 isoform 1 [Sus scrofa].
Length = 993
Score = 96.7 bits (239), Expect = 2e-20
Identities = 62/198 (31%), Positives = 92/198 (46%), Gaps = 4/198 (2%)
Frame = +3
Query: 354 GEILSPNYPQAYPNEVEKSWDIEVPEGYGIHLYFTHLDIELSENCAYDSVQIKSGGREE- 530
G I SPNYP Y W I+V EG+ + L F +IE ++CAYD ++++ G E
Sbjct: 451 GHIQSPNYPDDYRPSKVCIWRIQVSEGFHVGLTFQSFEIERHDSCAYDYLEVRDGHSESS 510
Query: 531 ---GKLCGQKTSKNPKSAVVEEFQVPYNKLQVIFTSDFSNEERFTGFAAYYVAVDVNECT 701
G+ CG + + KS ++L + F SD S + GFA + +V+EC+
Sbjct: 511 TLIGRYCGYEKPDDIKST--------SSRLWLKFVSDGSINK--AGFAVNFFK-EVDECS 559
Query: 702 DFADSPCSHFCNNYIGGYFCSCPPEYFLHEDKKNCGVNCSGDVFTTLIGEVASXXXXXXX 881
C C N +G Y CSC P Y L DK+ C C G T L G + S
Sbjct: 560 RPNRGGCEQRCLNTLGSYKCSCDPGYELAPDKRRCEAACGG-FLTKLNGSITSPGWPKEY 618
Query: 882 XENSRCDYQILLEEGFQV 935
N C +Q++ +++
Sbjct: 619 PPNKNCIWQLVAPTQYRI 636
Score = 87.8 bits (216), Expect = 9e-18
Identities = 56/204 (27%), Positives = 87/204 (42%)
Frame = +3
Query: 354 GEILSPNYPQAYPNEVEKSWDIEVPEGYGIHLYFTHLDIELSENCAYDSVQIKSGGREEG 533
G I SP +P+ YP W + P Y I L F + E ++ C YD V+++SG +
Sbjct: 607 GSITSPGWPKEYPPNKNCIWQLVAPTQYRISLQFDFFETEGNDVCKYDFVEVRSGLTADS 666
Query: 534 KLCGQKTSKNPKSAVVEEFQVPYNKLQVIFTSDFSNEERFTGFAAYYVAVDVNECTDFAD 713
KL G+ + + YN ++V F SD N GF A++ + D +EC+ +
Sbjct: 667 KLHGKFCGSEKPEVITSQ----YNNMRVEFKSD--NTVSKKGFKAHFFS-DKDECSK-DN 718
Query: 714 SPCSHFCNNYIGGYFCSCPPEYFLHEDKKNCGVNCSGDVFTTLIGEVASXXXXXXXXENS 893
C C N G Y C C + LH++K +C T+ G + S
Sbjct: 719 GGCQQDCVNTFGSYECQCRSGFVLHDNKHDCKEAGCDHKVTSTSGTITSPNWPDKYPSKK 778
Query: 894 RCDYQILLEEGFQVVVTMRRKDFD 965
C + I G +V +T D +
Sbjct: 779 ECTWAISSTPGHRVKLTFLEMDIE 802
Score = 55.8 bits (133), Expect = 4e-08
Identities = 44/145 (30%), Positives = 65/145 (44%), Gaps = 9/145 (6%)
Frame = +3
Query: 354 GEILSPNYPQAYPNEVEKSWDIEVPEGYGIHLYFTHLDIELSENCAYDSVQIKSGGREE- 530
G I SPN+P YP++ E +W I G+ + L F +DIE CAYD +++ G +
Sbjct: 763 GTITSPNWPDKYPSKKECTWAISSTPGHRVKLTFLEMDIESQPECAYDHLEVYDGRDAKA 822
Query: 531 ---GKLCGQKTSKNPKSAVVEEFQVPYNKLQVIFTSDFSNEERFTGFAAYYVA-----VD 686
G+ CG SK P+ + +++ + F SD S + + GF A + V
Sbjct: 823 PVLGRFCG---SKKPEPVLATG-----SRMFLRFYSDNSVQRK--GFQAAHSTECGGQVR 872
Query: 687 VNECTDFADSPCSHFCNNYIGGYFC 761
T S NNY GG C
Sbjct: 873 AEVKTKDLYSHAQFGDNNYPGGVDC 897
>ref|XP_003129040.2| PREDICTED: tolloid-like protein 1 [Sus scrofa].
Length = 1013
Score = 96.3 bits (238), Expect = 3e-20
Identities = 65/210 (30%), Positives = 98/210 (46%), Gaps = 4/210 (1%)
Frame = +3
Query: 354 GEILSPNYPQAYPNEVEKSWDIEVPEGYGIHLYFTHLDIELSENCAYDSVQIKSGGREE- 530
G+I SPNYP Y E W I V E + L F +IE +NCAYD ++++ G E
Sbjct: 471 GQIQSPNYPDDYRPMKECVWKIAVSEDCYVGLTFQAFEIERHDNCAYDYLEVRDGNSENS 530
Query: 531 ---GKLCGQKTSKNPKSAVVEEFQVPYNKLQVIFTSDFSNEERFTGFAAYYVAVDVNECT 701
G+ CG ++ KS N L + F SD + + GFAA + + +EC
Sbjct: 531 PLIGRFCGYDKPEDIKST--------SNTLWMKFVSDGTVNK--AGFAANFFK-EEDECA 579
Query: 702 DFADSPCSHFCNNYIGGYFCSCPPEYFLHEDKKNCGVNCSGDVFTTLIGEVASXXXXXXX 881
C C N +G Y CSC P Y L DK+ C C G + T L G + +
Sbjct: 580 KPDRGGCEQRCLNTLGSYQCSCEPGYELGPDKRTCEAACGG-LLTKLNGTITTPGWPKEY 638
Query: 882 XENSRCDYQILLEEGFQVVVTMRRKDFDVE 971
N C +Q++ ++ ++M+ + F++E
Sbjct: 639 PPNKHCVWQVVAPTQYR--ISMKFEFFELE 666
Score = 89.0 bits (219), Expect = 4e-18
Identities = 60/213 (28%), Positives = 96/213 (45%), Gaps = 1/213 (0%)
Frame = +3
Query: 354 GEILSPNYPQAYPNEVEKSWDIEVPEGYGIHLYFTHLDIELSENCAYDSVQIKSGGREEG 533
G I +P +P+ YP W + P Y I + F ++E +E C YD V+I SG E
Sbjct: 627 GTITTPGWPKEYPPNKHCVWQVVAPTQYRISMKFEFFELEGNEVCKYDYVEIWSGLSSES 686
Query: 534 KLCGQKTSKNPKSAVVEEFQVPYNKLQVIFTSDFSNEERFTGFAAYYVAVDVNECTDFAD 713
KL G+ + +F N +++ F SD N GF A++ + D +EC+ +
Sbjct: 687 KLHGKFCGAEVPEVITSQF----NNMRIEFKSD--NTVSKKGFKAHFFS-DKDECSK-DN 738
Query: 714 SPCSHFCNNYIGGYFCSCPPEYFLHEDKKNC-GVNCSGDVFTTLIGEVASXXXXXXXXEN 890
C H C N +G Y C C + LHE+K +C C + + G + S
Sbjct: 739 GGCQHECVNTMGSYTCQCRNGFVLHENKHDCKEAECEQKIHSP-SGFITSPNWPDKYPSR 797
Query: 891 SRCDYQILLEEGFQVVVTMRRKDFDVEQPNQGA 989
C ++I G +V + +F++EQ + A
Sbjct: 798 KECTWEISATPGHRVKLAF--SEFEIEQHQECA 828
Score = 64.3 bits (155), Expect = 1e-10
Identities = 38/109 (34%), Positives = 56/109 (51%), Gaps = 4/109 (3%)
Frame = +3
Query: 354 GEILSPNYPQAYPNEVEKSWDIEVPEGYGIHLYFTHLDIELSENCAYDSVQIKSGGREE- 530
G I SPN+P YP+ E +W+I G+ + L F+ +IE + CAYD +++ G E+
Sbjct: 783 GFITSPNWPDKYPSRKECTWEISATPGHRVKLAFSEFEIEQHQECAYDHLEVFDGETEKS 842
Query: 531 ---GKLCGQKTSKNPKSAVVEEFQVPYNKLQVIFTSDFSNEERFTGFAA 668
G+LCG K + E NK+ V F SD S + + GF A
Sbjct: 843 PILGRLCGNK--------IPEPIVATGNKMFVRFVSDASVQRK--GFQA 881
>ref|XP_003126570.2| PREDICTED: LOW QUALITY PROTEIN: complement C1r subcomponent-like
protein [Sus scrofa].
Length = 419
Score = 73.2 bits (178), Expect = 2e-13
Identities = 42/116 (36%), Positives = 59/116 (50%), Gaps = 4/116 (3%)
Frame = +3
Query: 357 EILSPNYPQAYPNEVEKSWDIEVPEGYGIHLYFTHLDIELSENCAYDSVQIKSGGREEGK 536
++ SP YP+ Y E DIE PEG+ + L F D+E S +C DSV I + G + +
Sbjct: 44 KLTSPGYPEPYVKGQESFTDIEAPEGFAVKLIFQDFDLEPSPDCEQDSVTITASGMDPSR 103
Query: 537 LCGQKTSKNPKSAVVEEFQVPYNKLQVIFTSDFSNEER----FTGFAAYYVAVDVN 692
CGQ+ S + F N L++ F + S+E+R GF A Y AV VN
Sbjct: 104 FCGQQGSPLGSPPGEKAFVSLGNSLRLTFRASASSEDRPPSLHKGFLALYQAVGVN 159
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 29,045,315
Number of extensions: 889087
Number of successful extensions: 3912
Number of sequences better than 1.0e-05: 29
Number of HSP's gapped: 3870
Number of HSP's successfully gapped: 55
Length of query: 351
Length of database: 11,343,932
Length adjustment: 100
Effective length of query: 251
Effective length of database: 8,854,232
Effective search space: 2222412232
Effective search space used: 2222412232
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007367
(1054 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
***** No hits found ******
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 31,341,880
Number of extensions: 161
Number of successful extensions: 161
Number of sequences better than 1.0e-05: 0
Number of HSP's gapped: 161
Number of HSP's successfully gapped: 0
Length of query: 1054
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1033
Effective length of database: 2,808,413,156
Effective search space: 2901090790148
Effective search space used: 2901090790148
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)