Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007406
(1099 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001095454.1| fatty aldehyde dehydrogenase [Bos taurus]. 480 e-136
Alignment gi|NP_001159985.1| aldehyde dehydrogenase, dimeric NADP-preferr... 393 e-109
Alignment gi|XP_002699413.1| PREDICTED: similar to aldehyde dehydrogenase... 283 2e-76
Alignment gi|XP_585724.2| PREDICTED: similar to aldehyde dehydrogenase 3B... 283 2e-76
Alignment gi|NP_001068986.1| aldehyde dehydrogenase family 3 member B1 [B... 281 7e-76
Alignment gi|XP_001252548.2| PREDICTED: aldehyde dehydrogenase family 3 m... 127 1e-29
Alignment gi|NP_776664.1| retinal dehydrogenase 1 [Bos taurus]. 107 1e-23
Alignment gi|NP_001178320.1| aldehyde dehydrogenase 1 family, member L2 [... 104 2e-22
Alignment gi|XP_002687691.1| PREDICTED: aldehyde dehydrogenase 1 family, ... 104 2e-22
Alignment gi|XP_002696563.1| PREDICTED: aldehyde dehydrogenase family 1 s... 103 3e-22
>ref|NP_001095454.1| fatty aldehyde dehydrogenase [Bos taurus].
Length = 485
Score = 480 bits (1236), Expect = e-136
Identities = 240/337 (71%), Positives = 268/337 (79%)
Frame = +3
Query: 48 MEREVQRLRAAFQTGRSXXXXXXXXXXXXXXXXXXEREEXXXXXXXXXXXXXXXNAYSQE 227
MEREVQR+RAAF +GRS ERE+ NAYSQE
Sbjct: 1 MEREVQRVRAAFGSGRSRPLTFRRRQLEALRVMVQEREKDILAAIGADLSKSEFNAYSQE 60
Query: 228 VLTILGEIDLALEKLPEWAAARPAEKNLLTMLDEAYVQPEPLGVMLIIGAWNYPLVLSIQ 407
V+T+LGEIDL LEKLPEWAAA+PA++NLLTMLDEAY+QPEPLGV+LIIGAWNYP L+IQ
Sbjct: 61 VITVLGEIDLMLEKLPEWAAAKPAQRNLLTMLDEAYIQPEPLGVVLIIGAWNYPFALTIQ 120
Query: 408 PLXXXXXXXXXXXXKPSEISENTAKILAKLLPQYLDQDLYAVINGGVEETTKLLEQRFDH 587
PL KPSE+SENTAK+LAKLLPQYLDQDLYAV+ GGVEETT+LL+QRFDH
Sbjct: 121 PLIGAIAAGNAVIIKPSEVSENTAKLLAKLLPQYLDQDLYAVVTGGVEETTELLKQRFDH 180
Query: 588 ILYTGSTAVGKIVMEAAAKHLTPVTLELGGKSPCYIDPDCDLDVACRRIAWGKYMNCGQT 767
ILYTG+T VGKIVM+AAAKHLTPVTLELGGKSPCY+D DCDLDVACRRIAWGK+MNCGQT
Sbjct: 181 ILYTGNTTVGKIVMQAAAKHLTPVTLELGGKSPCYVDRDCDLDVACRRIAWGKFMNCGQT 240
Query: 768 CIAPDYVLCEPSLQDQVVQKMKEAVKEFYGDNIKDSPDYERIVNLRHFKRIQSLLEGQKI 947
CIAPDYVLCEPSLQD +VQK++EAVK FYG+N+K+SPDYERIVNLRHFKRIQSLLEGQKI
Sbjct: 241 CIAPDYVLCEPSLQDLIVQKVQEAVKGFYGENVKESPDYERIVNLRHFKRIQSLLEGQKI 300
Query: 948 AFRWGDGRGHSLHSPNILTDVDPEAXVMREEIFGPIL 1058
AF +P ILTDVDP VM+EEIFGPIL
Sbjct: 301 AFGGEMDEATRYIAPTILTDVDPGTKVMQEEIFGPIL 337
>ref|NP_001159985.1| aldehyde dehydrogenase, dimeric NADP-preferring [Bos taurus].
Length = 453
Score = 393 bits (1010), Expect = e-109
Identities = 190/338 (56%), Positives = 239/338 (70%)
Frame = +3
Query: 45 AMEREVQRLRAAFQTGRSXXXXXXXXXXXXXXXXXXEREEXXXXXXXXXXXXXXXNAYSQ 224
A+ VQR RAAF +GR+ ERE+ AY +
Sbjct: 3 AISEVVQRARAAFNSGRTRPLQFRVQQLEGLRRLIREREKDLVGALAADLHKNEWTAYYE 62
Query: 225 EVLTILGEIDLALEKLPEWAAARPAEKNLLTMLDEAYVQPEPLGVMLIIGAWNYPLVLSI 404
E++ +L EID + KLPEWAA P EK T DEAY+ EPLGV+LIIG+WNYP L+I
Sbjct: 63 EIVYVLEEIDYMIRKLPEWAADEPVEKTPHTQQDEAYIHSEPLGVVLIIGSWNYPFNLTI 122
Query: 405 QPLXXXXXXXXXXXXKPSEISENTAKILAKLLPQYLDQDLYAVINGGVEETTKLLEQRFD 584
QP+ KPSE+SENTA +LA +LPQYLDQDLY VINGGV ETT++L++RFD
Sbjct: 123 QPMVGAIAAGNAVVLKPSELSENTASLLATILPQYLDQDLYPVINGGVAETTEVLKERFD 182
Query: 585 HILYTGSTAVGKIVMEAAAKHLTPVTLELGGKSPCYIDPDCDLDVACRRIAWGKYMNCGQ 764
HIL+TGST VG++VM AAAKHLTPVTLELGGK+PCY+D DCDLD+ACRRIAWGK+MN GQ
Sbjct: 183 HILFTGSTGVGRVVMMAAAKHLTPVTLELGGKNPCYVDKDCDLDIACRRIAWGKFMNSGQ 242
Query: 765 TCIAPDYVLCEPSLQDQVVQKMKEAVKEFYGDNIKDSPDYERIVNLRHFKRIQSLLEGQK 944
TC+APDY+LC+PS+Q QVV+K+K+++KEFYG++ K S DY RI+N RHF+R+ LLEGQK
Sbjct: 243 TCVAPDYILCDPSIQSQVVEKLKKSLKEFYGEDAKKSRDYGRIINSRHFQRVMGLLEGQK 302
Query: 945 IAFRWGDGRGHSLHSPNILTDVDPEAXVMREEIFGPIL 1058
+ + +P ILTDVDPE+ VM+EE+FGP+L
Sbjct: 303 VTYGGTGDATTRYIAPTILTDVDPESPVMQEEVFGPVL 340
>ref|XP_002699413.1| PREDICTED: similar to aldehyde dehydrogenase 3B1 [Bos taurus].
Length = 486
Score = 283 bits (724), Expect = 2e-76
Identities = 142/333 (42%), Positives = 199/333 (59%)
Frame = +3
Query: 60 VQRLRAAFQTGRSXXXXXXXXXXXXXXXXXXEREEXXXXXXXXXXXXXXXNAYSQEVLTI 239
+QRLR AF +GR+ E ++ ++ E++
Sbjct: 28 LQRLREAFVSGRTRPAKFRAAQLKGLSLFLQENKQLLQEALAQDLYKTAFHSEVSELILC 87
Query: 240 LGEIDLALEKLPEWAAARPAEKNLLTMLDEAYVQPEPLGVMLIIGAWNYPLVLSIQPLXX 419
++D AL L W P KNL+T LD +++ EP G++LI+ WNYPL LS+ PL
Sbjct: 88 QNQVDFALRNLHTWMKDEPGAKNLMTQLDSVFIRKEPFGLVLILSPWNYPLNLSLGPLVG 147
Query: 420 XXXXXXXXXXKPSEISENTAKILAKLLPQYLDQDLYAVINGGVEETTKLLEQRFDHILYT 599
KPSEIS++T K+LAK+LP+YLDQ +AV+ GG EET +LLE +FD+I +T
Sbjct: 148 ALAAGNCVVLKPSEISKSTMKVLAKVLPRYLDQSCFAVVLGGPEETGRLLEHKFDYIFFT 207
Query: 600 GSTAVGKIVMEAAAKHLTPVTLELGGKSPCYIDPDCDLDVACRRIAWGKYMNCGQTCIAP 779
GS VGKIVM AAAKHLTPVTLELGGK+PCY+D +CD R+A+ + N GQTC+AP
Sbjct: 208 GSPRVGKIVMAAAAKHLTPVTLELGGKNPCYVDDNCDPQTVANRVAFFRCFNTGQTCVAP 267
Query: 780 DYVLCEPSLQDQVVQKMKEAVKEFYGDNIKDSPDYERIVNLRHFKRIQSLLEGQKIAFRW 959
DYVLC P +Q ++V ++ A+ FYG++ + SPD RI++ +HF+R++ LL ++
Sbjct: 268 DYVLCSPEMQAKLVPALQSAITRFYGNDPQRSPDLGRIISQKHFQRLRGLLSCGRVVIGG 327
Query: 960 GDGRGHSLHSPNILTDVDPEAXVMREEIFGPIL 1058
+P +L DV VM+EEIFGPIL
Sbjct: 328 QSDESDLYIAPTVLVDVKETEPVMQEEIFGPIL 360
>ref|XP_585724.2| PREDICTED: similar to aldehyde dehydrogenase 3B1 isoform 1 [Bos
taurus].
Length = 486
Score = 283 bits (724), Expect = 2e-76
Identities = 142/333 (42%), Positives = 199/333 (59%)
Frame = +3
Query: 60 VQRLRAAFQTGRSXXXXXXXXXXXXXXXXXXEREEXXXXXXXXXXXXXXXNAYSQEVLTI 239
+QRLR AF +GR+ E ++ ++ E++
Sbjct: 28 LQRLREAFVSGRTRPAKFRAAQLKGLSLFLQENKQLLQEALAQDLYKTAFHSEVSELILC 87
Query: 240 LGEIDLALEKLPEWAAARPAEKNLLTMLDEAYVQPEPLGVMLIIGAWNYPLVLSIQPLXX 419
++D AL L W P KNL+T LD +++ EP G++LI+ WNYPL LS+ PL
Sbjct: 88 QNQVDFALRNLHTWMKDEPGAKNLMTQLDSVFIRKEPFGLVLILSPWNYPLNLSLGPLVG 147
Query: 420 XXXXXXXXXXKPSEISENTAKILAKLLPQYLDQDLYAVINGGVEETTKLLEQRFDHILYT 599
KPSEIS++T K+LAK+LP+YLDQ +AV+ GG EET +LLE +FD+I +T
Sbjct: 148 ALAAGNCVVLKPSEISKSTMKVLAKVLPRYLDQSCFAVVLGGPEETGRLLEHKFDYIFFT 207
Query: 600 GSTAVGKIVMEAAAKHLTPVTLELGGKSPCYIDPDCDLDVACRRIAWGKYMNCGQTCIAP 779
GS VGKIVM AAAKHLTPVTLELGGK+PCY+D +CD R+A+ + N GQTC+AP
Sbjct: 208 GSPRVGKIVMAAAAKHLTPVTLELGGKNPCYVDDNCDPQTVANRVAFFRCFNTGQTCVAP 267
Query: 780 DYVLCEPSLQDQVVQKMKEAVKEFYGDNIKDSPDYERIVNLRHFKRIQSLLEGQKIAFRW 959
DYVLC P +Q ++V ++ A+ FYG++ + SPD RI++ +HF+R++ LL ++
Sbjct: 268 DYVLCSPEMQAKLVPALQSAITRFYGNDPQRSPDLGRIISQKHFQRLRGLLSCGRVVIGG 327
Query: 960 GDGRGHSLHSPNILTDVDPEAXVMREEIFGPIL 1058
+P +L DV VM+EEIFGPIL
Sbjct: 328 QSDESDLYIAPTVLVDVKETEPVMQEEIFGPIL 360
>ref|NP_001068986.1| aldehyde dehydrogenase family 3 member B1 [Bos taurus].
Length = 468
Score = 281 bits (719), Expect = 7e-76
Identities = 144/333 (43%), Positives = 197/333 (59%)
Frame = +3
Query: 60 VQRLRAAFQTGRSXXXXXXXXXXXXXXXXXXEREEXXXXXXXXXXXXXXXNAYSQEVLTI 239
+QRLR AF +GR+ E ++ A E+
Sbjct: 8 LQRLREAFVSGRTRPAEFRDAQLKGLSRFLRENKQLLQEALAQDLHKSAFEAEVSEISIS 67
Query: 240 LGEIDLALEKLPEWAAARPAEKNLLTMLDEAYVQPEPLGVMLIIGAWNYPLVLSIQPLXX 419
EI+LAL L W KNL T LD A+++ EP G++LI+ WNYPL LS+ PL
Sbjct: 68 QNEINLALRNLRTWMKDEKVSKNLATQLDSAFIRKEPFGLVLILSPWNYPLNLSLGPLVG 127
Query: 420 XXXXXXXXXXKPSEISENTAKILAKLLPQYLDQDLYAVINGGVEETTKLLEQRFDHILYT 599
KPSEIS+NT K+LA++LP+YLDQ +AV+ GG +ET +LLE +FD+I +T
Sbjct: 128 ALAAGNCVVLKPSEISKNTEKVLAEVLPRYLDQSCFAVVLGGPQETGRLLEHKFDYIFFT 187
Query: 600 GSTAVGKIVMEAAAKHLTPVTLELGGKSPCYIDPDCDLDVACRRIAWGKYMNCGQTCIAP 779
G+ VGKIVM AAAKHLTPVTLELGGK+PCY+D +CD R+A+ + N GQTC+AP
Sbjct: 188 GNPQVGKIVMTAAAKHLTPVTLELGGKNPCYVDDNCDPQTVANRVAFFRCFNAGQTCVAP 247
Query: 780 DYVLCEPSLQDQVVQKMKEAVKEFYGDNIKDSPDYERIVNLRHFKRIQSLLEGQKIAFRW 959
DYVLC P +Q Q+V ++ A+ FYGD+ + SP+ RI++ +HF+R++ LL ++
Sbjct: 248 DYVLCSPEMQAQLVPALQSAITRFYGDDPQSSPNLGRIISQKHFQRLRGLLSCGRVVIGG 307
Query: 960 GDGRGHSLHSPNILTDVDPEAXVMREEIFGPIL 1058
+P +L DV VM+EEIFGPIL
Sbjct: 308 QSDECDLYIAPTVLVDVQETDPVMQEEIFGPIL 340
>ref|XP_001252548.2| PREDICTED: aldehyde dehydrogenase family 3 member B1-like [Bos
taurus].
Length = 198
Score = 127 bits (320), Expect = 1e-29
Identities = 71/191 (37%), Positives = 98/191 (51%)
Frame = +3
Query: 60 VQRLRAAFQTGRSXXXXXXXXXXXXXXXXXXEREEXXXXXXXXXXXXXXXNAYSQEVLTI 239
+QRLR AF +GR+ E ++ A E+
Sbjct: 8 LQRLREAFVSGRTRPAEFRDAQLKGLSRFLRENKQLLQEALAQDLHKSAFEAEVSEISIS 67
Query: 240 LGEIDLALEKLPEWAAARPAEKNLLTMLDEAYVQPEPLGVMLIIGAWNYPLVLSIQPLXX 419
EI+LAL L W KNL T LD A+++ EP G++LI+ WNYPL LS+ PL
Sbjct: 68 QNEINLALRNLRTWMKDEKVSKNLATQLDSAFIRKEPFGLVLILSPWNYPLNLSLGPLVG 127
Query: 420 XXXXXXXXXXKPSEISENTAKILAKLLPQYLDQDLYAVINGGVEETTKLLEQRFDHILYT 599
KPSEIS+NT K+LA++LP+YLDQ +AV+ GG +ET +LLE +FD+I +T
Sbjct: 128 ALAAGNCVVLKPSEISKNTEKVLAEVLPRYLDQSCFAVVLGGPQETGRLLEHKFDYIFFT 187
Query: 600 GSTAVGKIVME 632
S + E
Sbjct: 188 VSHVTASALAE 198
>ref|NP_776664.1| retinal dehydrogenase 1 [Bos taurus].
Length = 501
Score = 107 bits (268), Expect = 1e-23
Identities = 79/269 (29%), Positives = 132/269 (49%), Gaps = 13/269 (4%)
Frame = +3
Query: 294 PAEKNLLTMLDEAYVQPEPLGVMLIIGAWNYPLVLSIQPLXXXXXXXXXXXXKPSEISEN 473
P + N T Y + EP+GV I WN+PL++ + + KP+E +
Sbjct: 146 PMDGNFFT-----YTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPL 200
Query: 474 TAKILAKLLPQY-LDQDLYAVINGGVEETTKLLEQRFD--HILYTGSTAVGKIVMEAAAK 644
TA + L+ + + ++ G + D + +TGST VGK++ EAA K
Sbjct: 201 TALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGK 260
Query: 645 -HLTPVTLELGGKSPCYIDPDCDLDVACRRIAWGKYMNCGQTCIAPDYVLCEPSLQDQVV 821
+L V+LELGGKSPC + D DLD A G + + GQ CIA + E S+ D+ V
Sbjct: 261 SNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFV 320
Query: 822 QKMKEAVKEF-YGDNIKDSPDYERIVNLRHFKRIQSLLE-GQKIAFR-------WGDGRG 974
++ E K++ G+ + ++ +++I L+E G+K + WG+ +G
Sbjct: 321 RRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGN-KG 379
Query: 975 HSLHSPNILTDVDPEAXVMREEIFGPILQ 1061
+ + P + +DV + + +EEIFGP+ Q
Sbjct: 380 YFI-QPTVFSDVTDDMRIAKEEIFGPVQQ 407
>ref|NP_001178320.1| aldehyde dehydrogenase 1 family, member L2 [Bos taurus].
Length = 923
Score = 104 bits (259), Expect = 2e-22
Identities = 77/253 (30%), Positives = 123/253 (48%), Gaps = 11/253 (4%)
Frame = +3
Query: 333 YVQPEPLGVMLIIGAWNYPLVLSIQPLXXXXXXXXXXXXKPSEISENTAKILAKL-LPQY 509
+ + EPLGV II WNYPL++ KP++++ TA A+L +
Sbjct: 579 FTKKEPLGVCAIIIPWNYPLMMLAWKSAACLAAGNTLVLKPAQVTPLTALKFAELSVKAG 638
Query: 510 LDQDLYAVINGGVEETTKLLEQRFD--HILYTGSTAVGKIVMEAAA-KHLTPVTLELGGK 680
+ + +I G + L + D + +TGST +GK +M++ A +L V+LELGGK
Sbjct: 639 FPKGVINIIPGSGGVVGQHLSEHPDIRKLGFTGSTLIGKQIMKSCAMSNLKKVSLELGGK 698
Query: 681 SPCYIDPDCDLDVACRRIAWGKYMNCGQTCIAPDYVLCEPSLQDQVVQKMKEAVKEF-YG 857
SP I DC+LD A R + N G+ CIA + E S+ D+ V +M E +K+ G
Sbjct: 699 SPLIIFSDCELDKAVRMGMGAVFFNKGENCIAAGRLFVEESIHDEFVTRMVEEIKKMKIG 758
Query: 858 DNIKDSPDYERIVNLRHFKRI-----QSLLEGQKIAFRWGD-GRGHSLHSPNILTDVDPE 1019
D + S D+ + H +++ + EG + + R P + TDV+
Sbjct: 759 DPLDRSTDHGPQNHKAHLEKLLQYCEAGVKEGATLVYGGRQVQRPGFFMEPTVFTDVEDH 818
Query: 1020 AXVMREEIFGPIL 1058
+ +EE FGPI+
Sbjct: 819 MYLAKEESFGPIM 831
>ref|XP_002687691.1| PREDICTED: aldehyde dehydrogenase 1 family, member L2 [Bos taurus].
Length = 923
Score = 104 bits (259), Expect = 2e-22
Identities = 77/253 (30%), Positives = 123/253 (48%), Gaps = 11/253 (4%)
Frame = +3
Query: 333 YVQPEPLGVMLIIGAWNYPLVLSIQPLXXXXXXXXXXXXKPSEISENTAKILAKL-LPQY 509
+ + EPLGV II WNYPL++ KP++++ TA A+L +
Sbjct: 579 FTKKEPLGVCAIIIPWNYPLMMLAWKSAACLAAGNTLVLKPAQVTPLTALKFAELSVKAG 638
Query: 510 LDQDLYAVINGGVEETTKLLEQRFD--HILYTGSTAVGKIVMEAAA-KHLTPVTLELGGK 680
+ + +I G + L + D + +TGST +GK +M++ A +L V+LELGGK
Sbjct: 639 FPKGVINIIPGSGGVVGQHLSEHPDIRKLGFTGSTLIGKQIMKSCAMSNLKKVSLELGGK 698
Query: 681 SPCYIDPDCDLDVACRRIAWGKYMNCGQTCIAPDYVLCEPSLQDQVVQKMKEAVKEF-YG 857
SP I DC+LD A R + N G+ CIA + E S+ D+ V +M E +K+ G
Sbjct: 699 SPLIIFSDCELDKAVRMGMGAVFFNKGENCIAAGRLFVEESIHDEFVTRMVEEIKKMKIG 758
Query: 858 DNIKDSPDYERIVNLRHFKRI-----QSLLEGQKIAFRWGD-GRGHSLHSPNILTDVDPE 1019
D + S D+ + H +++ + EG + + R P + TDV+
Sbjct: 759 DPLDRSTDHGPQNHKAHLEKLLQYCEAGVKEGATLVYGGRQVQRPGFFMEPTVFTDVEDH 818
Query: 1020 AXVMREEIFGPIL 1058
+ +EE FGPI+
Sbjct: 819 MYLAKEESFGPIM 831
>ref|XP_002696563.1| PREDICTED: aldehyde dehydrogenase family 1 subfamily A3-like [Bos
taurus].
Length = 537
Score = 103 bits (256), Expect = 3e-22
Identities = 80/254 (31%), Positives = 117/254 (46%), Gaps = 13/254 (5%)
Frame = +3
Query: 333 YVQPEPLGVMLIIGAWNYPLVLSIQPLXXXXXXXXXXXXKPSEISENTAKILAKLLPQYL 512
+ + EP+GV I WN+PL++ + L KP+E + TA L L+ +
Sbjct: 190 FTRHEPIGVCGAITPWNFPLLMLVWKLAPALCCGNTVVLKPAEQTPLTALYLGSLIKEVG 249
Query: 513 DQDLYAVINGGVEETTKLLEQRFDHI---LYTGSTAVGKIVMEAAA-KHLTPVTLELGGK 680
I G T HI +TGST VGK+V EAA+ +L VTLELGGK
Sbjct: 250 FPPGVVNIVPGFGPTVGAAISSHPHINKIAFTGSTEVGKLVKEAASHSNLKRVTLELGGK 309
Query: 681 SPCYI--DPDCDLDVACRRIAWGKYMNCGQTCIAPDYVLCEPSLQDQVVQKMKE-AVKEF 851
+PC + D DCDL V C G + N GQ C A V E + D+ V++ E A K
Sbjct: 310 NPCIVCADADCDLAVECAH--QGVFFNQGQCCTAASRVFVEEQVYDEFVRRSVEYAKKRP 367
Query: 852 YGDNIKDSPDYERIVNLRHFKRIQSLLEGQKIAFRWGDGRGHSLH------SPNILTDVD 1013
GD + ++ + F +I L+E K + G ++ P + ++V
Sbjct: 368 VGDPFDVRTEQGPQIDQKQFDKILDLIESGKKEGAKLECGGSAMEDRGLFIKPTVFSEVT 427
Query: 1014 PEAXVMREEIFGPI 1055
+ +EEIFGP+
Sbjct: 428 DTMRIAKEEIFGPV 441
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 38,422,959
Number of extensions: 995788
Number of successful extensions: 3924
Number of sequences better than 1.0e-05: 24
Number of HSP's gapped: 3869
Number of HSP's successfully gapped: 24
Length of query: 366
Length of database: 17,681,374
Length adjustment: 104
Effective length of query: 262
Effective length of database: 14,240,222
Effective search space: 3730938164
Effective search space used: 3730938164
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007406
(1099 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_536656.2| PREDICTED: similar to Fatty aldehyde dehydrogen... 477 e-134
Alignment gi|NP_001075889.1| aldehyde dehydrogenase, dimeric NADP-preferr... 382 e-106
Alignment gi|XP_533211.2| PREDICTED: similar to Aldehyde dehydrogenase 3B... 286 2e-77
Alignment gi|XP_864177.1| PREDICTED: similar to Aldehyde dehydrogenase 3B... 280 1e-75
Alignment gi|XP_864201.1| PREDICTED: similar to aldehyde dehydrogenase 3B... 263 3e-70
Alignment gi|XP_854611.1| PREDICTED: similar to Aldehyde dehydrogenase 3B... 232 4e-61
Alignment gi|XP_531763.2| PREDICTED: similar to aldehyde dehydrogenase 1 ... 105 8e-23
Alignment gi|XP_545823.2| PREDICTED: similar to leucine-rich repeat kinas... 102 5e-22
Alignment gi|XP_533525.1| PREDICTED: similar to Retinal dehydrogenase 1 (... 102 8e-22
Alignment gi|XP_533713.2| PREDICTED: similar to 10-formyltetrahydrofolate... 100 2e-21
>ref|XP_536656.2| PREDICTED: similar to Fatty aldehyde dehydrogenase (Aldehyde
dehydrogenase, microsomal) (Aldehyde dehydrogenase family
3 member A2) [Canis familiaris].
Length = 485
Score = 477 bits (1227), Expect = e-134
Identities = 237/337 (70%), Positives = 266/337 (78%)
Frame = +3
Query: 48 MEREVQRLRAAFQTGRSXXXXXXXXXXXXXXXXXXEREEXXXXXXXXXXXXXXXNAYSQE 227
ME +QR+RAAF +GRS ERE+ NAYSQE
Sbjct: 1 MESRIQRVRAAFASGRSRPVRFRLQQLEALRRMVQEREKDILEAIAGDLCKSELNAYSQE 60
Query: 228 VLTILGEIDLALEKLPEWAAARPAEKNLLTMLDEAYVQPEPLGVMLIIGAWNYPLVLSIQ 407
V+T+LGE+DL LE LPEW AA+PA+KNLLTMLDEAYVQPEPLGV+LIIGAWNYP VL+IQ
Sbjct: 61 VITVLGELDLVLENLPEWVAAKPAKKNLLTMLDEAYVQPEPLGVVLIIGAWNYPFVLTIQ 120
Query: 408 PLXXXXXXXXXXXXKPSEISENTAKILAKLLPQYLDQDLYAVINGGVEETTKLLEQRFDH 587
PL KPSE+SE TAKILA+LLP+YLDQDLY VINGGVEETT+LL+QRFDH
Sbjct: 121 PLIGAIAAGNAVIIKPSELSEKTAKILAELLPRYLDQDLYVVINGGVEETTELLKQRFDH 180
Query: 588 ILYTGSTAVGKIVMEAAAKHLTPVTLELGGKSPCYIDPDCDLDVACRRIAWGKYMNCGQT 767
ILYTG+TAVGKIVMEAAAKHLTPVTLELGGKSPCY+D DCDLD+ACRRI WGKYMNCGQT
Sbjct: 181 ILYTGNTAVGKIVMEAAAKHLTPVTLELGGKSPCYVDKDCDLDIACRRITWGKYMNCGQT 240
Query: 768 CIAPDYVLCEPSLQDQVVQKMKEAVKEFYGDNIKDSPDYERIVNLRHFKRIQSLLEGQKI 947
CIAPDYVLCEPSLQ+Q+VQK+KE VKEFYG+NIK+SPDYERI+NLRHFKRI SLLEGQKI
Sbjct: 241 CIAPDYVLCEPSLQNQIVQKIKETVKEFYGENIKESPDYERIINLRHFKRILSLLEGQKI 300
Query: 948 AFRWGDGRGHSLHSPNILTDVDPEAXVMREEIFGPIL 1058
AF +P IL+DVDPE+ VM+EEIFGPIL
Sbjct: 301 AFGGETDEATRYIAPTILSDVDPESRVMQEEIFGPIL 337
>ref|NP_001075889.1| aldehyde dehydrogenase, dimeric NADP-preferring [Canis lupus
familiaris].
Length = 453
Score = 382 bits (980), Expect = e-106
Identities = 180/333 (54%), Positives = 236/333 (70%)
Frame = +3
Query: 60 VQRLRAAFQTGRSXXXXXXXXXXXXXXXXXXEREEXXXXXXXXXXXXXXXNAYSQEVLTI 239
VQR RAAF +G++ E E+ NAY +EV+ +
Sbjct: 8 VQRARAAFNSGKTRPLQFRIQQLEALRRMIKEHEKDLAGALTADLHKNEWNAYYEEVVYV 67
Query: 240 LGEIDLALEKLPEWAAARPAEKNLLTMLDEAYVQPEPLGVMLIIGAWNYPLVLSIQPLXX 419
L EI+ ++KLPEWAA P EK T DE Y+ EPLGV+LIIG WNYP ++IQP+
Sbjct: 68 LEEIEYMIKKLPEWAADEPVEKTPQTQQDECYIHSEPLGVVLIIGTWNYPFTVTIQPMVG 127
Query: 420 XXXXXXXXXXKPSEISENTAKILAKLLPQYLDQDLYAVINGGVEETTKLLEQRFDHILYT 599
KPSE+SEN A +LA ++PQYLD+DLY VI+GG+ ETT+LL++RFDHILYT
Sbjct: 128 AIAAGNAVVIKPSELSENMANLLATIIPQYLDRDLYPVISGGIPETTELLKERFDHILYT 187
Query: 600 GSTAVGKIVMEAAAKHLTPVTLELGGKSPCYIDPDCDLDVACRRIAWGKYMNCGQTCIAP 779
G+TAVGK++M AAAKHLTPVTLELGGK+PCY+D DCDLD+ACRRIAWGK+MN GQTC+AP
Sbjct: 188 GNTAVGKVIMMAAAKHLTPVTLELGGKNPCYVDKDCDLDIACRRIAWGKFMNSGQTCVAP 247
Query: 780 DYVLCEPSLQDQVVQKMKEAVKEFYGDNIKDSPDYERIVNLRHFKRIQSLLEGQKIAFRW 959
DY+LC+PS+Q+Q+V+K+K+A+KEFYG++ K S DY RI+N RHF+R+ L+EGQK+A+
Sbjct: 248 DYILCDPSIQNQIVEKLKKALKEFYGEDAKKSRDYGRIINSRHFQRVMGLMEGQKVAYGG 307
Query: 960 GDGRGHSLHSPNILTDVDPEAXVMREEIFGPIL 1058
+P IL DVD ++ VM+EEIFGP++
Sbjct: 308 TGDAATRYIAPTILIDVDTQSQVMQEEIFGPVM 340
>ref|XP_533211.2| PREDICTED: similar to Aldehyde dehydrogenase 3B1 (Aldehyde
dehydrogenase 7) isoform 1 [Canis familiaris].
Length = 468
Score = 286 bits (732), Expect = 2e-77
Identities = 143/333 (42%), Positives = 196/333 (58%)
Frame = +3
Query: 60 VQRLRAAFQTGRSXXXXXXXXXXXXXXXXXXEREEXXXXXXXXXXXXXXXNAYSQEVLTI 239
+QRLR AF GR+ E ++ + E+
Sbjct: 8 LQRLREAFSAGRTRSPEFRAAQLKGLGRFLQENKQLLQEALAQDLHKSTFESEVSEIHIS 67
Query: 240 LGEIDLALEKLPEWAAARPAEKNLLTMLDEAYVQPEPLGVMLIIGAWNYPLVLSIQPLXX 419
EIDLAL L W KNL T LD A+++ EP G++LII WNYP+ L++ PL
Sbjct: 68 QSEIDLALRNLRSWMKDEKVPKNLATQLDSAFIRKEPFGLVLIIAPWNYPVNLTLVPLVG 127
Query: 420 XXXXXXXXXXKPSEISENTAKILAKLLPQYLDQDLYAVINGGVEETTKLLEQRFDHILYT 599
KPSE S +T K+LA++LP+YLDQ +AV+ GG +ET +LLE +FD+I +T
Sbjct: 128 ALAAGNCVVLKPSEFSRSTEKVLAEVLPRYLDQSCFAVVLGGPQETGQLLEHKFDYIFFT 187
Query: 600 GSTAVGKIVMEAAAKHLTPVTLELGGKSPCYIDPDCDLDVACRRIAWGKYMNCGQTCIAP 779
GS VG+IVM AAAKHLTPVTLELGGK+PCY+D DCD R+AW +Y NCGQTC+AP
Sbjct: 188 GSPRVGRIVMTAAAKHLTPVTLELGGKNPCYVDDDCDPQTVANRVAWFRYFNCGQTCVAP 247
Query: 780 DYVLCEPSLQDQVVQKMKEAVKEFYGDNIKDSPDYERIVNLRHFKRIQSLLEGQKIAFRW 959
DYVLC P +++++ ++ A+ FYGD+ + SP R+V+ +HF+R++ LL ++A
Sbjct: 248 DYVLCSPHTRERLLPALQSAITRFYGDDPRRSPSLGRVVSDKHFRRLRGLLGCGRVAIGG 307
Query: 960 GDGRGHSLHSPNILTDVDPEAXVMREEIFGPIL 1058
+P +L DV VM+EEIFGPIL
Sbjct: 308 QSDEDERYIAPTVLVDVQETEPVMQEEIFGPIL 340
>ref|XP_864177.1| PREDICTED: similar to Aldehyde dehydrogenase 3B1 (Aldehyde
dehydrogenase 7) isoform 2 [Canis familiaris].
Length = 472
Score = 280 bits (717), Expect = 1e-75
Identities = 143/337 (42%), Positives = 196/337 (58%), Gaps = 4/337 (1%)
Frame = +3
Query: 60 VQRLRAAFQTGRSXXXXXXXXXXXXXXXXXXEREEXXXXXXXXXXXXXXXNAYSQEVLTI 239
+QRLR AF GR+ E ++ + E+
Sbjct: 8 LQRLREAFSAGRTRSPEFRAAQLKGLGRFLQENKQLLQEALAQDLHKSTFESEVSEIHIS 67
Query: 240 LGEIDLALEKLPEWAAARPAEKNLLTMLDEAYVQPEPLGVMLIIGAWNYPLVLSIQPLXX 419
EIDLAL L W KNL T LD A+++ EP G++LII WNYP+ L++ PL
Sbjct: 68 QSEIDLALRNLRSWMKDEKVPKNLATQLDSAFIRKEPFGLVLIIAPWNYPVNLTLVPLVG 127
Query: 420 XXXXXXXXXXKPSEISENTAKILAKLLPQYLDQDLYAVINGGVEETTKLLEQRFDHILYT 599
KPSE S +T K+LA++LP+YLDQ +AV+ GG +ET +LLE +FD+I +T
Sbjct: 128 ALAAGNCVVLKPSEFSRSTEKVLAEVLPRYLDQSCFAVVLGGPQETGQLLEHKFDYIFFT 187
Query: 600 G----STAVGKIVMEAAAKHLTPVTLELGGKSPCYIDPDCDLDVACRRIAWGKYMNCGQT 767
G S VG+IVM AAAKHLTPVTLELGGK+PCY+D DCD R+AW +Y NCGQT
Sbjct: 188 GKHLGSPRVGRIVMTAAAKHLTPVTLELGGKNPCYVDDDCDPQTVANRVAWFRYFNCGQT 247
Query: 768 CIAPDYVLCEPSLQDQVVQKMKEAVKEFYGDNIKDSPDYERIVNLRHFKRIQSLLEGQKI 947
C+APDYVLC P +++++ ++ A+ FYGD+ + SP R+V+ +HF+R++ LL ++
Sbjct: 248 CVAPDYVLCSPHTRERLLPALQSAITRFYGDDPRRSPSLGRVVSDKHFRRLRGLLGCGRV 307
Query: 948 AFRWGDGRGHSLHSPNILTDVDPEAXVMREEIFGPIL 1058
A +P +L DV VM+EEIFGPIL
Sbjct: 308 AIGGQSDEDERYIAPTVLVDVQETEPVMQEEIFGPIL 344
>ref|XP_864201.1| PREDICTED: similar to aldehyde dehydrogenase 3B1 isoform b isoform 3
[Canis familiaris].
Length = 431
Score = 263 bits (671), Expect = 3e-70
Identities = 122/248 (49%), Positives = 169/248 (68%)
Frame = +3
Query: 315 TMLDEAYVQPEPLGVMLIIGAWNYPLVLSIQPLXXXXXXXXXXXXKPSEISENTAKILAK 494
T LD A+++ EP G++LII WNYP+ L++ PL KPSE S +T K+LA+
Sbjct: 56 TQLDSAFIRKEPFGLVLIIAPWNYPVNLTLVPLVGALAAGNCVVLKPSEFSRSTEKVLAE 115
Query: 495 LLPQYLDQDLYAVINGGVEETTKLLEQRFDHILYTGSTAVGKIVMEAAAKHLTPVTLELG 674
+LP+YLDQ +AV+ GG +ET +LLE +FD+I +TGS VG+IVM AAAKHLTPVTLELG
Sbjct: 116 VLPRYLDQSCFAVVLGGPQETGQLLEHKFDYIFFTGSPRVGRIVMTAAAKHLTPVTLELG 175
Query: 675 GKSPCYIDPDCDLDVACRRIAWGKYMNCGQTCIAPDYVLCEPSLQDQVVQKMKEAVKEFY 854
GK+PCY+D DCD R+AW +Y NCGQTC+APDYVLC P +++++ ++ A+ FY
Sbjct: 176 GKNPCYVDDDCDPQTVANRVAWFRYFNCGQTCVAPDYVLCSPHTRERLLPALQSAITRFY 235
Query: 855 GDNIKDSPDYERIVNLRHFKRIQSLLEGQKIAFRWGDGRGHSLHSPNILTDVDPEAXVMR 1034
GD+ + SP R+V+ +HF+R++ LL ++A +P +L DV VM+
Sbjct: 236 GDDPRRSPSLGRVVSDKHFRRLRGLLGCGRVAIGGQSDEDERYIAPTVLVDVQETEPVMQ 295
Query: 1035 EEIFGPIL 1058
EEIFGPIL
Sbjct: 296 EEIFGPIL 303
>ref|XP_854611.1| PREDICTED: similar to Aldehyde dehydrogenase 3B1 (Aldehyde
dehydrogenase 7) [Canis familiaris].
Length = 626
Score = 232 bits (592), Expect = 4e-61
Identities = 113/247 (45%), Positives = 147/247 (59%)
Frame = +3
Query: 60 VQRLRAAFQTGRSXXXXXXXXXXXXXXXXXXEREEXXXXXXXXXXXXXXXNAYSQEVLTI 239
++RLR AF GR+ E ++ A + E+L
Sbjct: 8 LRRLREAFSAGRTRSPEFRAAQLKGLGRFLQENKQLLQEALAQDLHKSVFEAETSELLMC 67
Query: 240 LGEIDLALEKLPEWAAARPAEKNLLTMLDEAYVQPEPLGVMLIIGAWNYPLVLSIQPLXX 419
E+DLAL+ L W P KNL T LD A++Q EP G++LII WNYP+ L + L
Sbjct: 68 QNEVDLALKNLHNWMKDEPVAKNLFTQLDSAFIQKEPFGLVLIIAPWNYPMNLPLVSLVG 127
Query: 420 XXXXXXXXXXKPSEISENTAKILAKLLPQYLDQDLYAVINGGVEETTKLLEQRFDHILYT 599
KPSE+S++T K+LA++LPQYLDQ +AV+ GG +ET +LLE +FD+I +
Sbjct: 128 ALATGNCVVLKPSELSKSTEKVLAEVLPQYLDQSCFAVVLGGPQETRQLLEHKFDYIFFP 187
Query: 600 GSTAVGKIVMEAAAKHLTPVTLELGGKSPCYIDPDCDLDVACRRIAWGKYMNCGQTCIAP 779
GS VG+IVM AAAKHLTPVTLELGGK+PCY+D DCD R+AW +Y NCGQTC+ P
Sbjct: 188 GSPRVGRIVMTAAAKHLTPVTLELGGKNPCYVDDDCDPQTVANRVAWFRYFNCGQTCVVP 247
Query: 780 DYVLCEP 800
DY LC P
Sbjct: 248 DYALCSP 254
>ref|XP_531763.2| PREDICTED: similar to aldehyde dehydrogenase 1 family, member L2
[Canis familiaris].
Length = 923
Score = 105 bits (262), Expect = 8e-23
Identities = 78/253 (30%), Positives = 123/253 (48%), Gaps = 11/253 (4%)
Frame = +3
Query: 333 YVQPEPLGVMLIIGAWNYPLVLSIQPLXXXXXXXXXXXXKPSEISENTAKILAKLLPQY- 509
+ + EPLGV II WNYPL++ KP++++ TA A+L +
Sbjct: 579 FTKKEPLGVCAIIIPWNYPLMMLAWKSAACLAAGNTLVLKPAQVTPLTALKFAELSSKAG 638
Query: 510 LDQDLYAVI--NGGVEETTKLLEQRFDHILYTGSTAVGKIVMEAAA-KHLTPVTLELGGK 680
+ + +I +GGV + +TGSTA+GK +M++ A +L V+LELGGK
Sbjct: 639 FPKGVINIIPGSGGVAGQRLSEHPHIRKLGFTGSTAIGKQIMKSCAVSNLKKVSLELGGK 698
Query: 681 SPCYIDPDCDLDVACRRIAWGKYMNCGQTCIAPDYVLCEPSLQDQVVQKMKEAVKEF-YG 857
SP I DC+LD A R + N G+ CIA + E S+ D+ V K+ E +K+ G
Sbjct: 699 SPLIIFNDCELDKAVRMGMGAVFFNKGENCIAAGRLFVEESIHDEFVTKVVEEIKKMKIG 758
Query: 858 DNIKDSPDYERIVNLRHFKRI-----QSLLEGQKIAFRWGD-GRGHSLHSPNILTDVDPE 1019
D + S D+ + H +++ + EG + + R P + TDV+
Sbjct: 759 DPLDRSTDHGPQNHQAHLEKLLQYCEAGVKEGATLVYGGRQVCRPGFFMEPTVFTDVEDH 818
Query: 1020 AXVMREEIFGPIL 1058
+ +EE FGPI+
Sbjct: 819 MYLAKEESFGPIM 831
>ref|XP_545823.2| PREDICTED: similar to leucine-rich repeat kinase 1 [Canis
familiaris].
Length = 2787
Score = 102 bits (255), Expect = 5e-22
Identities = 77/252 (30%), Positives = 116/252 (46%), Gaps = 11/252 (4%)
Frame = +3
Query: 333 YVQPEPLGVMLIIGAWNYPLVLSIQPLXXXXXXXXXXXXKPSEISENTAKILAKLLPQYL 512
+ + EP+GV I WN+PL++ + L KP+E + TA L L+ +
Sbjct: 405 FTRHEPIGVCGAITPWNFPLLMLVWKLAPALCCGNTIVVKPAEQTPLTALYLGSLIKEVG 464
Query: 513 DQDLYAVINGGVEETTKLLEQRFDHI---LYTGSTAVGKIVMEAAAK-HLTPVTLELGGK 680
I G T HI +TGST VGK+V EAA++ +L VTLELGGK
Sbjct: 465 FPPGVVNIVPGFGPTVGAAISSHPHISKIAFTGSTEVGKLVKEAASRSNLKRVTLELGGK 524
Query: 681 SPCYIDPDCDLDVACRRIAWGKYMNCGQTCIAPDYVLCEPSLQDQVVQKMKE-AVKEFYG 857
+PC + D DLD+A G + N GQ C A V E + + V++ E A K G
Sbjct: 525 NPCIVCADADLDLAVECAHQGVFFNQGQCCTAASRVFVEEQIYPEFVRRSVEYAKKRPIG 584
Query: 858 DNIKDSPDYERIVNLRHFKRIQSLLEGQKIAFRWGDGRGHSLH------SPNILTDVDPE 1019
D + ++ + F +I L+E K + G ++ P + ++V
Sbjct: 585 DPFDIRTEQGPQIDQKQFDKILDLIESGKKEGAKLECGGSAMEDRGLFIKPTVFSEVTDT 644
Query: 1020 AXVMREEIFGPI 1055
+ +EEIFGP+
Sbjct: 645 MRIAKEEIFGPV 656
>ref|XP_533525.1| PREDICTED: similar to Retinal dehydrogenase 1 (RalDH1) (RALDH 1)
(Aldehyde dehydrogenase family 1 member A1) (Aldehyde
dehydrogenase, cytosolic) (ALHDII) (ALDH-E1) isoform 1
[Canis familiaris].
Length = 501
Score = 102 bits (253), Expect = 8e-22
Identities = 77/256 (30%), Positives = 126/256 (49%), Gaps = 13/256 (5%)
Frame = +3
Query: 333 YVQPEPLGVMLIIGAWNYPLVLSIQPLXXXXXXXXXXXXKPSEISENTAKILAKLLPQY- 509
Y + EP+GV I WN+PL + I + KP+E + TA +A L+ +
Sbjct: 154 YTRHEPIGVCGQIIPWNFPLFMFIWKIGPALCCGNTVVVKPAEQTPLTALHVASLIQEAG 213
Query: 510 LDQDLYAVINGGVEETTKLLEQRFD--HILYTGSTAVGKIVMEAAAK-HLTPVTLELGGK 680
+ ++ G + D + +TGST VGK++ EAA K +L VTLELGGK
Sbjct: 214 FPPGVVNIVPGYGPTAGAAISSHMDIDKVAFTGSTEVGKMIKEAAGKSNLKRVTLELGGK 273
Query: 681 SPCYIDPDCDLDVACRRIAWGKYMNCGQTCIAPDYVLCEPSLQDQVVQKMKEAVKEF-YG 857
SP + D DLD A + + GQ CIA + E S+ D+ V++ E K++ G
Sbjct: 274 SPFIVFADSDLDSAVEVAHQALFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLG 333
Query: 858 DNIKDSPDYERIVNLRHFKRIQSLLE-GQKIAFR-------WGDGRGHSLHSPNILTDVD 1013
+ + ++ + +++I L+E G+K + WG+ +G + P + ++V
Sbjct: 334 NPLTPGVSQGPQIDKKQYEKILDLIESGKKEGAKLECGGGPWGN-KGFFI-QPTVFSNVT 391
Query: 1014 PEAXVMREEIFGPILQ 1061
E + +EEIFGP+ Q
Sbjct: 392 DEMRIAKEEIFGPVQQ 407
>ref|XP_533713.2| PREDICTED: similar to 10-formyltetrahydrofolate dehydrogenase
(10-FTHFDH) (Aldehyde dehydrogenase 1 family member L1)
[Canis familiaris].
Length = 902
Score = 100 bits (250), Expect = 2e-21
Identities = 85/270 (31%), Positives = 124/270 (45%), Gaps = 13/270 (4%)
Frame = +3
Query: 288 ARPAEKNLLTMLDEAYVQPEPLGVMLIIGAWNYPLVLSIQPLXXXXXXXXXXXXKPSEIS 467
ARP LT + EP+GV I+ WNYPL++ KP++++
Sbjct: 550 ARPNRNLTLT-------KKEPIGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVT 602
Query: 468 ENTAKILAKL-LPQYLDQDLYAVINGGVEETTKLLEQRFD--HILYTGSTAVGKIVMEAA 638
TA A+L L + + + ++ G + L D I +TGST VGK +M++
Sbjct: 603 PLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSC 662
Query: 639 A-KHLTPVTLELGGKSPCYIDPDCDLDVACRRIAWGKYMNCGQTCIAPDYVLCEPSLQDQ 815
A ++ V+LELGGKSP I DCDL A + + N G+ CIA + E S+ DQ
Sbjct: 663 ALSNVKKVSLELGGKSPLIIFADCDLSKAVQMGMSSVFFNKGENCIAAGRLFVEDSIHDQ 722
Query: 816 VVQKMKEAVKEFYGDNIKDSPDYERIVNLRHFKRIQSLLEGQKIAFRWGDG---RGHSL- 983
VQK+ E VK+ N D N H +Q L+E + G GH +
Sbjct: 723 FVQKVVEEVKKMKIGNPLDRDTNHGPQN--HQAHLQKLVEYCQHGVEEGATLVCGGHQVP 780
Query: 984 -----HSPNILTDVDPEAXVMREEIFGPIL 1058
P + TDV+ + +EE FGPI+
Sbjct: 781 RPGFFFEPTVFTDVEDHMFIAKEESFGPIM 810
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 40,261,038
Number of extensions: 1032449
Number of successful extensions: 3970
Number of sequences better than 1.0e-05: 26
Number of HSP's gapped: 3898
Number of HSP's successfully gapped: 26
Length of query: 366
Length of database: 18,874,504
Length adjustment: 104
Effective length of query: 262
Effective length of database: 15,407,560
Effective search space: 4036780720
Effective search space used: 4036780720
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007406
(1099 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_000373.1| fatty aldehyde dehydrogenase isoform 2 [Homo sa... 462 e-130
Alignment gi|NP_001026976.1| fatty aldehyde dehydrogenase isoform 1 [Homo... 462 e-130
Alignment gi|NP_001128640.1| aldehyde dehydrogenase, dimeric NADP-preferr... 387 e-108
Alignment gi|NP_001128639.1| aldehyde dehydrogenase, dimeric NADP-preferr... 387 e-108
Alignment gi|NP_000682.3| aldehyde dehydrogenase, dimeric NADP-preferring... 387 e-108
Alignment gi|NP_001154945.1| aldehyde dehydrogenase family 3 member B1 is... 286 2e-77
Alignment gi|NP_000685.1| aldehyde dehydrogenase family 3 member B1 isofo... 286 2e-77
Alignment gi|NP_001025181.1| aldehyde dehydrogenase family 3 member B1 is... 265 6e-71
Alignment gi|NP_001026786.1| aldehyde dehydrogenase family 3 member B2 [H... 256 3e-68
Alignment gi|NP_000686.2| aldehyde dehydrogenase family 3 member B2 [Homo... 256 3e-68
>ref|NP_000373.1| fatty aldehyde dehydrogenase isoform 2 [Homo sapiens].
Length = 485
Score = 462 bits (1188), Expect = e-130
Identities = 229/337 (67%), Positives = 258/337 (76%)
Frame = +3
Query: 48 MEREVQRLRAAFQTGRSXXXXXXXXXXXXXXXXXXEREEXXXXXXXXXXXXXXXNAYSQE 227
ME EV+R+R AF +GRS ERE+ N YSQE
Sbjct: 1 MELEVRRVRQAFLSGRSRPLRFRLQQLEALRRMVQEREKDILTAIAADLCKSEFNVYSQE 60
Query: 228 VLTILGEIDLALEKLPEWAAARPAEKNLLTMLDEAYVQPEPLGVMLIIGAWNYPLVLSIQ 407
V+T+LGEID LE LPEW A+P +KN+LTMLDEAY+QP+PLGV+LIIGAWNYP VL+IQ
Sbjct: 61 VITVLGEIDFMLENLPEWVTAKPVKKNVLTMLDEAYIQPQPLGVVLIIGAWNYPFVLTIQ 120
Query: 408 PLXXXXXXXXXXXXKPSEISENTAKILAKLLPQYLDQDLYAVINGGVEETTKLLEQRFDH 587
PL KPSE+SENTAKILAKLLPQYLDQDLY VINGGVEETT+LL+QRFDH
Sbjct: 121 PLIGAIAAGNAVIIKPSELSENTAKILAKLLPQYLDQDLYIVINGGVEETTELLKQRFDH 180
Query: 588 ILYTGSTAVGKIVMEAAAKHLTPVTLELGGKSPCYIDPDCDLDVACRRIAWGKYMNCGQT 767
I YTG+TAVGKIVMEAAAKHLTPVTLELGGKSPCYID DCDLD+ CRRI WGKYMNCGQT
Sbjct: 181 IFYTGNTAVGKIVMEAAAKHLTPVTLELGGKSPCYIDKDCDLDIVCRRITWGKYMNCGQT 240
Query: 768 CIAPDYVLCEPSLQDQVVQKMKEAVKEFYGDNIKDSPDYERIVNLRHFKRIQSLLEGQKI 947
CIAPDY+LCE SLQ+Q+V K+KE VKEFYG+NIK+SPDYERI+NLRHFKRI SLLEGQKI
Sbjct: 241 CIAPDYILCEASLQNQIVWKIKETVKEFYGENIKESPDYERIINLRHFKRILSLLEGQKI 300
Query: 948 AFRWGDGRGHSLHSPNILTDVDPEAXVMREEIFGPIL 1058
AF +P +LTDVDP+ VM+EEIFGPIL
Sbjct: 301 AFGGETDEATRYIAPTVLTDVDPKTKVMQEEIFGPIL 337
>ref|NP_001026976.1| fatty aldehyde dehydrogenase isoform 1 [Homo sapiens].
Length = 508
Score = 462 bits (1188), Expect = e-130
Identities = 229/337 (67%), Positives = 258/337 (76%)
Frame = +3
Query: 48 MEREVQRLRAAFQTGRSXXXXXXXXXXXXXXXXXXEREEXXXXXXXXXXXXXXXNAYSQE 227
ME EV+R+R AF +GRS ERE+ N YSQE
Sbjct: 1 MELEVRRVRQAFLSGRSRPLRFRLQQLEALRRMVQEREKDILTAIAADLCKSEFNVYSQE 60
Query: 228 VLTILGEIDLALEKLPEWAAARPAEKNLLTMLDEAYVQPEPLGVMLIIGAWNYPLVLSIQ 407
V+T+LGEID LE LPEW A+P +KN+LTMLDEAY+QP+PLGV+LIIGAWNYP VL+IQ
Sbjct: 61 VITVLGEIDFMLENLPEWVTAKPVKKNVLTMLDEAYIQPQPLGVVLIIGAWNYPFVLTIQ 120
Query: 408 PLXXXXXXXXXXXXKPSEISENTAKILAKLLPQYLDQDLYAVINGGVEETTKLLEQRFDH 587
PL KPSE+SENTAKILAKLLPQYLDQDLY VINGGVEETT+LL+QRFDH
Sbjct: 121 PLIGAIAAGNAVIIKPSELSENTAKILAKLLPQYLDQDLYIVINGGVEETTELLKQRFDH 180
Query: 588 ILYTGSTAVGKIVMEAAAKHLTPVTLELGGKSPCYIDPDCDLDVACRRIAWGKYMNCGQT 767
I YTG+TAVGKIVMEAAAKHLTPVTLELGGKSPCYID DCDLD+ CRRI WGKYMNCGQT
Sbjct: 181 IFYTGNTAVGKIVMEAAAKHLTPVTLELGGKSPCYIDKDCDLDIVCRRITWGKYMNCGQT 240
Query: 768 CIAPDYVLCEPSLQDQVVQKMKEAVKEFYGDNIKDSPDYERIVNLRHFKRIQSLLEGQKI 947
CIAPDY+LCE SLQ+Q+V K+KE VKEFYG+NIK+SPDYERI+NLRHFKRI SLLEGQKI
Sbjct: 241 CIAPDYILCEASLQNQIVWKIKETVKEFYGENIKESPDYERIINLRHFKRILSLLEGQKI 300
Query: 948 AFRWGDGRGHSLHSPNILTDVDPEAXVMREEIFGPIL 1058
AF +P +LTDVDP+ VM+EEIFGPIL
Sbjct: 301 AFGGETDEATRYIAPTVLTDVDPKTKVMQEEIFGPIL 337
>ref|NP_001128640.1| aldehyde dehydrogenase, dimeric NADP-preferring [Homo sapiens].
Length = 453
Score = 387 bits (995), Expect = e-108
Identities = 185/333 (55%), Positives = 238/333 (71%)
Frame = +3
Query: 60 VQRLRAAFQTGRSXXXXXXXXXXXXXXXXXXEREEXXXXXXXXXXXXXXXNAYSQEVLTI 239
V+R RAAF +GR+ E+E+ NAY +EV+ +
Sbjct: 8 VKRARAAFSSGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYEEVVYV 67
Query: 240 LGEIDLALEKLPEWAAARPAEKNLLTMLDEAYVQPEPLGVMLIIGAWNYPLVLSIQPLXX 419
L EI+ ++KLPEWAA P EK T DE Y+ EPLGV+L+IG WNYP L+IQP+
Sbjct: 68 LEEIEYMIQKLPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLTIQPMVG 127
Query: 420 XXXXXXXXXXKPSEISENTAKILAKLLPQYLDQDLYAVINGGVEETTKLLEQRFDHILYT 599
KPSE+SEN A +LA ++PQYLD+DLY VINGGV ETT+LL++RFDHILYT
Sbjct: 128 AIAAGNSVVLKPSELSENMASLLATIIPQYLDKDLYPVINGGVPETTELLKERFDHILYT 187
Query: 600 GSTAVGKIVMEAAAKHLTPVTLELGGKSPCYIDPDCDLDVACRRIAWGKYMNCGQTCIAP 779
GST VGKI+M AAAKHLTPVTLELGGKSPCY+D +CDLDVACRRIAWGK+MN GQTC+AP
Sbjct: 188 GSTGVGKIIMTAAAKHLTPVTLELGGKSPCYVDKNCDLDVACRRIAWGKFMNSGQTCVAP 247
Query: 780 DYVLCEPSLQDQVVQKMKEAVKEFYGDNIKDSPDYERIVNLRHFKRIQSLLEGQKIAFRW 959
DY+LC+PS+Q+Q+V+K+K+++KEFYG++ K S DY RI++ RHF+R+ L+EGQK+A+
Sbjct: 248 DYILCDPSIQNQIVEKLKKSLKEFYGEDAKKSRDYGRIISARHFQRVMGLIEGQKVAYGG 307
Query: 960 GDGRGHSLHSPNILTDVDPEAXVMREEIFGPIL 1058
+P ILTDVDP++ VM+EEIFGP+L
Sbjct: 308 TGDAATRYIAPTILTDVDPQSPVMQEEIFGPVL 340
>ref|NP_001128639.1| aldehyde dehydrogenase, dimeric NADP-preferring [Homo sapiens].
Length = 453
Score = 387 bits (995), Expect = e-108
Identities = 185/333 (55%), Positives = 238/333 (71%)
Frame = +3
Query: 60 VQRLRAAFQTGRSXXXXXXXXXXXXXXXXXXEREEXXXXXXXXXXXXXXXNAYSQEVLTI 239
V+R RAAF +GR+ E+E+ NAY +EV+ +
Sbjct: 8 VKRARAAFSSGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYEEVVYV 67
Query: 240 LGEIDLALEKLPEWAAARPAEKNLLTMLDEAYVQPEPLGVMLIIGAWNYPLVLSIQPLXX 419
L EI+ ++KLPEWAA P EK T DE Y+ EPLGV+L+IG WNYP L+IQP+
Sbjct: 68 LEEIEYMIQKLPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLTIQPMVG 127
Query: 420 XXXXXXXXXXKPSEISENTAKILAKLLPQYLDQDLYAVINGGVEETTKLLEQRFDHILYT 599
KPSE+SEN A +LA ++PQYLD+DLY VINGGV ETT+LL++RFDHILYT
Sbjct: 128 AIAAGNSVVLKPSELSENMASLLATIIPQYLDKDLYPVINGGVPETTELLKERFDHILYT 187
Query: 600 GSTAVGKIVMEAAAKHLTPVTLELGGKSPCYIDPDCDLDVACRRIAWGKYMNCGQTCIAP 779
GST VGKI+M AAAKHLTPVTLELGGKSPCY+D +CDLDVACRRIAWGK+MN GQTC+AP
Sbjct: 188 GSTGVGKIIMTAAAKHLTPVTLELGGKSPCYVDKNCDLDVACRRIAWGKFMNSGQTCVAP 247
Query: 780 DYVLCEPSLQDQVVQKMKEAVKEFYGDNIKDSPDYERIVNLRHFKRIQSLLEGQKIAFRW 959
DY+LC+PS+Q+Q+V+K+K+++KEFYG++ K S DY RI++ RHF+R+ L+EGQK+A+
Sbjct: 248 DYILCDPSIQNQIVEKLKKSLKEFYGEDAKKSRDYGRIISARHFQRVMGLIEGQKVAYGG 307
Query: 960 GDGRGHSLHSPNILTDVDPEAXVMREEIFGPIL 1058
+P ILTDVDP++ VM+EEIFGP+L
Sbjct: 308 TGDAATRYIAPTILTDVDPQSPVMQEEIFGPVL 340
>ref|NP_000682.3| aldehyde dehydrogenase, dimeric NADP-preferring [Homo sapiens].
Length = 453
Score = 387 bits (995), Expect = e-108
Identities = 185/333 (55%), Positives = 238/333 (71%)
Frame = +3
Query: 60 VQRLRAAFQTGRSXXXXXXXXXXXXXXXXXXEREEXXXXXXXXXXXXXXXNAYSQEVLTI 239
V+R RAAF +GR+ E+E+ NAY +EV+ +
Sbjct: 8 VKRARAAFSSGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYEEVVYV 67
Query: 240 LGEIDLALEKLPEWAAARPAEKNLLTMLDEAYVQPEPLGVMLIIGAWNYPLVLSIQPLXX 419
L EI+ ++KLPEWAA P EK T DE Y+ EPLGV+L+IG WNYP L+IQP+
Sbjct: 68 LEEIEYMIQKLPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLTIQPMVG 127
Query: 420 XXXXXXXXXXKPSEISENTAKILAKLLPQYLDQDLYAVINGGVEETTKLLEQRFDHILYT 599
KPSE+SEN A +LA ++PQYLD+DLY VINGGV ETT+LL++RFDHILYT
Sbjct: 128 AIAAGNSVVLKPSELSENMASLLATIIPQYLDKDLYPVINGGVPETTELLKERFDHILYT 187
Query: 600 GSTAVGKIVMEAAAKHLTPVTLELGGKSPCYIDPDCDLDVACRRIAWGKYMNCGQTCIAP 779
GST VGKI+M AAAKHLTPVTLELGGKSPCY+D +CDLDVACRRIAWGK+MN GQTC+AP
Sbjct: 188 GSTGVGKIIMTAAAKHLTPVTLELGGKSPCYVDKNCDLDVACRRIAWGKFMNSGQTCVAP 247
Query: 780 DYVLCEPSLQDQVVQKMKEAVKEFYGDNIKDSPDYERIVNLRHFKRIQSLLEGQKIAFRW 959
DY+LC+PS+Q+Q+V+K+K+++KEFYG++ K S DY RI++ RHF+R+ L+EGQK+A+
Sbjct: 248 DYILCDPSIQNQIVEKLKKSLKEFYGEDAKKSRDYGRIISARHFQRVMGLIEGQKVAYGG 307
Query: 960 GDGRGHSLHSPNILTDVDPEAXVMREEIFGPIL 1058
+P ILTDVDP++ VM+EEIFGP+L
Sbjct: 308 TGDAATRYIAPTILTDVDPQSPVMQEEIFGPVL 340
>ref|NP_001154945.1| aldehyde dehydrogenase family 3 member B1 isoform a [Homo sapiens].
Length = 468
Score = 286 bits (733), Expect = 2e-77
Identities = 145/333 (43%), Positives = 197/333 (59%)
Frame = +3
Query: 60 VQRLRAAFQTGRSXXXXXXXXXXXXXXXXXXEREEXXXXXXXXXXXXXXXNAYSQEVLTI 239
++RLR AF GR+ E ++ + EV
Sbjct: 8 LRRLREAFHAGRTRPAEFRAAQLQGLGRFLQENKQLLHDALAQDLHKSAFESEVSEVAIS 67
Query: 240 LGEIDLALEKLPEWAAARPAEKNLLTMLDEAYVQPEPLGVMLIIGAWNYPLVLSIQPLXX 419
GE+ LAL L W KNL T LD A+++ EP G++LII WNYPL L++ PL
Sbjct: 68 QGEVTLALRNLRAWMKDERVPKNLATQLDSAFIRKEPFGLVLIIAPWNYPLNLTLVPLVG 127
Query: 420 XXXXXXXXXXKPSEISENTAKILAKLLPQYLDQDLYAVINGGVEETTKLLEQRFDHILYT 599
KPSEIS+N KILA++LPQY+DQ +AV+ GG +ET +LLE RFD+I +T
Sbjct: 128 ALAAGNCVVLKPSEISKNVEKILAEVLPQYVDQSCFAVVLGGPQETGQLLEHRFDYIFFT 187
Query: 600 GSTAVGKIVMEAAAKHLTPVTLELGGKSPCYIDPDCDLDVACRRIAWGKYMNCGQTCIAP 779
GS VGKIVM AAAKHLTPVTLELGGK+PCY+D +CD R+AW +Y N GQTC+AP
Sbjct: 188 GSPRVGKIVMTAAAKHLTPVTLELGGKNPCYVDDNCDPQTVANRVAWFRYFNAGQTCVAP 247
Query: 780 DYVLCEPSLQDQVVQKMKEAVKEFYGDNIKDSPDYERIVNLRHFKRIQSLLEGQKIAFRW 959
DYVLC P +Q++++ ++ + FYGD+ + SP+ RI+N + F+R+++LL ++A
Sbjct: 248 DYVLCSPEMQERLLPALQSTITRFYGDDPQSSPNLGRIINQKQFQRLRALLGCGRVAIGG 307
Query: 960 GDGRGHSLHSPNILTDVDPEAXVMREEIFGPIL 1058
+P +L DV VM+EEIFGPIL
Sbjct: 308 QSDESDRYIAPTVLVDVQEMEPVMQEEIFGPIL 340
>ref|NP_000685.1| aldehyde dehydrogenase family 3 member B1 isoform a [Homo sapiens].
Length = 468
Score = 286 bits (733), Expect = 2e-77
Identities = 145/333 (43%), Positives = 197/333 (59%)
Frame = +3
Query: 60 VQRLRAAFQTGRSXXXXXXXXXXXXXXXXXXEREEXXXXXXXXXXXXXXXNAYSQEVLTI 239
++RLR AF GR+ E ++ + EV
Sbjct: 8 LRRLREAFHAGRTRPAEFRAAQLQGLGRFLQENKQLLHDALAQDLHKSAFESEVSEVAIS 67
Query: 240 LGEIDLALEKLPEWAAARPAEKNLLTMLDEAYVQPEPLGVMLIIGAWNYPLVLSIQPLXX 419
GE+ LAL L W KNL T LD A+++ EP G++LII WNYPL L++ PL
Sbjct: 68 QGEVTLALRNLRAWMKDERVPKNLATQLDSAFIRKEPFGLVLIIAPWNYPLNLTLVPLVG 127
Query: 420 XXXXXXXXXXKPSEISENTAKILAKLLPQYLDQDLYAVINGGVEETTKLLEQRFDHILYT 599
KPSEIS+N KILA++LPQY+DQ +AV+ GG +ET +LLE RFD+I +T
Sbjct: 128 ALAAGNCVVLKPSEISKNVEKILAEVLPQYVDQSCFAVVLGGPQETGQLLEHRFDYIFFT 187
Query: 600 GSTAVGKIVMEAAAKHLTPVTLELGGKSPCYIDPDCDLDVACRRIAWGKYMNCGQTCIAP 779
GS VGKIVM AAAKHLTPVTLELGGK+PCY+D +CD R+AW +Y N GQTC+AP
Sbjct: 188 GSPRVGKIVMTAAAKHLTPVTLELGGKNPCYVDDNCDPQTVANRVAWFRYFNAGQTCVAP 247
Query: 780 DYVLCEPSLQDQVVQKMKEAVKEFYGDNIKDSPDYERIVNLRHFKRIQSLLEGQKIAFRW 959
DYVLC P +Q++++ ++ + FYGD+ + SP+ RI+N + F+R+++LL ++A
Sbjct: 248 DYVLCSPEMQERLLPALQSTITRFYGDDPQSSPNLGRIINQKQFQRLRALLGCGRVAIGG 307
Query: 960 GDGRGHSLHSPNILTDVDPEAXVMREEIFGPIL 1058
+P +L DV VM+EEIFGPIL
Sbjct: 308 QSDESDRYIAPTVLVDVQEMEPVMQEEIFGPIL 340
>ref|NP_001025181.1| aldehyde dehydrogenase family 3 member B1 isoform b [Homo sapiens].
Length = 431
Score = 265 bits (677), Expect = 6e-71
Identities = 125/248 (50%), Positives = 170/248 (68%)
Frame = +3
Query: 315 TMLDEAYVQPEPLGVMLIIGAWNYPLVLSIQPLXXXXXXXXXXXXKPSEISENTAKILAK 494
T LD A+++ EP G++LII WNYPL L++ PL KPSEIS+N KILA+
Sbjct: 56 TQLDSAFIRKEPFGLVLIIAPWNYPLNLTLVPLVGALAAGNCVVLKPSEISKNVEKILAE 115
Query: 495 LLPQYLDQDLYAVINGGVEETTKLLEQRFDHILYTGSTAVGKIVMEAAAKHLTPVTLELG 674
+LPQY+DQ +AV+ GG +ET +LLE RFD+I +TGS VGKIVM AAAKHLTPVTLELG
Sbjct: 116 VLPQYVDQSCFAVVLGGPQETGQLLEHRFDYIFFTGSPRVGKIVMTAAAKHLTPVTLELG 175
Query: 675 GKSPCYIDPDCDLDVACRRIAWGKYMNCGQTCIAPDYVLCEPSLQDQVVQKMKEAVKEFY 854
GK+PCY+D +CD R+AW +Y N GQTC+APDYVLC P +Q++++ ++ + FY
Sbjct: 176 GKNPCYVDDNCDPQTVANRVAWFRYFNAGQTCVAPDYVLCSPEMQERLLPALQSTITRFY 235
Query: 855 GDNIKDSPDYERIVNLRHFKRIQSLLEGQKIAFRWGDGRGHSLHSPNILTDVDPEAXVMR 1034
GD+ + SP+ RI+N + F+R+++LL ++A +P +L DV VM+
Sbjct: 236 GDDPQSSPNLGRIINQKQFQRLRALLGCGRVAIGGQSDESDRYIAPTVLVDVQEMEPVMQ 295
Query: 1035 EEIFGPIL 1058
EEIFGPIL
Sbjct: 296 EEIFGPIL 303
>ref|NP_001026786.1| aldehyde dehydrogenase family 3 member B2 [Homo sapiens].
Length = 385
Score = 256 bits (654), Expect = 3e-68
Identities = 122/255 (47%), Positives = 166/255 (65%)
Frame = +3
Query: 294 PAEKNLLTMLDEAYVQPEPLGVMLIIGAWNYPLVLSIQPLXXXXXXXXXXXXKPSEISEN 473
P NL LD ++ EP G++LII WNYPL L++ L KPSEIS+
Sbjct: 5 PRSTNLFMKLDSVFIWKEPFGLVLIIAPWNYPLNLTLVLLVGALAAGSCVVLKPSEISQG 64
Query: 474 TAKILAKLLPQYLDQDLYAVINGGVEETTKLLEQRFDHILYTGSTAVGKIVMEAAAKHLT 653
T K+LA++LPQYLDQ +AV+ GG +ET +LLE + D+I +TGS VGKIVM AA KHLT
Sbjct: 65 TEKVLAEVLPQYLDQSCFAVVLGGPQETGQLLEHKLDYIFFTGSPRVGKIVMTAATKHLT 124
Query: 654 PVTLELGGKSPCYIDPDCDLDVACRRIAWGKYMNCGQTCIAPDYVLCEPSLQDQVVQKMK 833
PVTLELGGK+PCY+D +CD R+AW Y N GQTC+APDYVLC P +Q++++ ++
Sbjct: 125 PVTLELGGKNPCYVDDNCDPQTVANRVAWFCYFNAGQTCVAPDYVLCSPEMQERLLPALQ 184
Query: 834 EAVKEFYGDNIKDSPDYERIVNLRHFKRIQSLLEGQKIAFRWGDGRGHSLHSPNILTDVD 1013
+ FYGD+ + SP+ RI+N + F+R+++LL ++A +P +L DV
Sbjct: 185 STITRFYGDDPQSSPNLGRIINQKQFQRLRALLGCGRVAIGGQSNESDRYIAPTVLVDVQ 244
Query: 1014 PEAXVMREEIFGPIL 1058
VM+EEIFGPIL
Sbjct: 245 ETEPVMQEEIFGPIL 259
>ref|NP_000686.2| aldehyde dehydrogenase family 3 member B2 [Homo sapiens].
Length = 385
Score = 256 bits (654), Expect = 3e-68
Identities = 122/255 (47%), Positives = 166/255 (65%)
Frame = +3
Query: 294 PAEKNLLTMLDEAYVQPEPLGVMLIIGAWNYPLVLSIQPLXXXXXXXXXXXXKPSEISEN 473
P NL LD ++ EP G++LII WNYPL L++ L KPSEIS+
Sbjct: 5 PRSTNLFMKLDSVFIWKEPFGLVLIIAPWNYPLNLTLVLLVGALAAGSCVVLKPSEISQG 64
Query: 474 TAKILAKLLPQYLDQDLYAVINGGVEETTKLLEQRFDHILYTGSTAVGKIVMEAAAKHLT 653
T K+LA++LPQYLDQ +AV+ GG +ET +LLE + D+I +TGS VGKIVM AA KHLT
Sbjct: 65 TEKVLAEVLPQYLDQSCFAVVLGGPQETGQLLEHKLDYIFFTGSPRVGKIVMTAATKHLT 124
Query: 654 PVTLELGGKSPCYIDPDCDLDVACRRIAWGKYMNCGQTCIAPDYVLCEPSLQDQVVQKMK 833
PVTLELGGK+PCY+D +CD R+AW Y N GQTC+APDYVLC P +Q++++ ++
Sbjct: 125 PVTLELGGKNPCYVDDNCDPQTVANRVAWFCYFNAGQTCVAPDYVLCSPEMQERLLPALQ 184
Query: 834 EAVKEFYGDNIKDSPDYERIVNLRHFKRIQSLLEGQKIAFRWGDGRGHSLHSPNILTDVD 1013
+ FYGD+ + SP+ RI+N + F+R+++LL ++A +P +L DV
Sbjct: 185 STITRFYGDDPQSSPNLGRIINQKQFQRLRALLGCGRVAIGGQSNESDRYIAPTVLVDVQ 244
Query: 1014 PEAXVMREEIFGPIL 1058
VM+EEIFGPIL
Sbjct: 245 ETEPVMQEEIFGPIL 259
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 39,365,160
Number of extensions: 1010758
Number of successful extensions: 3829
Number of sequences better than 1.0e-05: 30
Number of HSP's gapped: 3761
Number of HSP's successfully gapped: 30
Length of query: 366
Length of database: 18,297,164
Length adjustment: 104
Effective length of query: 262
Effective length of database: 14,868,908
Effective search space: 3895653896
Effective search space used: 3895653896
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007406
(1099 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_031463.2| fatty aldehyde dehydrogenase [Mus musculus]. 464 e-131
Alignment gi|NP_001106196.1| aldehyde dehydrogenase, dimeric NADP-preferr... 350 9e-97
Alignment gi|NP_031462.2| aldehyde dehydrogenase, dimeric NADP-preferring... 350 9e-97
Alignment gi|NP_082821.2| aldehyde dehydrogenase 3 family, member B2-like... 303 2e-82
Alignment gi|NP_001170909.1| aldehyde dehydrogenase 3 family, member B2 [... 302 3e-82
Alignment gi|NP_080592.2| aldehyde dehydrogenase family 3 member B1 [Mus ... 292 3e-79
Alignment gi|NP_038495.2| retinal dehydrogenase 1 [Mus musculus]. 114 2e-25
Alignment gi|NP_036051.1| aldehyde dehydrogenase, cytosolic 1 [Mus muscul... 108 6e-24
Alignment gi|NP_444310.3| aldehyde dehydrogenase family 1 member A3 [Mus ... 104 1e-22
Alignment gi|NP_064377.2| 4-trimethylaminobutyraldehyde dehydrogenase [Mu... 103 2e-22
>ref|NP_031463.2| fatty aldehyde dehydrogenase [Mus musculus].
Length = 484
Score = 464 bits (1193), Expect = e-131
Identities = 233/337 (69%), Positives = 264/337 (78%)
Frame = +3
Query: 48 MEREVQRLRAAFQTGRSXXXXXXXXXXXXXXXXXXEREEXXXXXXXXXXXXXXXNAYSQE 227
MER+V RLR AF++GRS ERE+ NAYS E
Sbjct: 1 MERQVLRLRQAFRSGRSRPLRFRLQQLEALRRMVQEREKEILAAIAADLSKSELNAYSHE 60
Query: 228 VLTILGEIDLALEKLPEWAAARPAEKNLLTMLDEAYVQPEPLGVMLIIGAWNYPLVLSIQ 407
V+TILGEID L LPE A+ARPA+KNLLTM+DEAYVQPEPLGV+LIIGAWNYP VL++Q
Sbjct: 61 VITILGEIDFMLGNLPELASARPAKKNLLTMMDEAYVQPEPLGVVLIIGAWNYPFVLTMQ 120
Query: 408 PLXXXXXXXXXXXXKPSEISENTAKILAKLLPQYLDQDLYAVINGGVEETTKLLEQRFDH 587
PL KPSE+SENTAKILA+LLPQYLDQDLYA++NGG+ ETT+LL+QRFDH
Sbjct: 121 PLVGAIAAGNAAIVKPSELSENTAKILAELLPQYLDQDLYAIVNGGIPETTELLKQRFDH 180
Query: 588 ILYTGSTAVGKIVMEAAAKHLTPVTLELGGKSPCYIDPDCDLDVACRRIAWGKYMNCGQT 767
ILYTG+TAVGKIVMEAAAKHLTPVTLELGGKSPCYID DCDLDVACRRIAWGKYMNCGQT
Sbjct: 181 ILYTGNTAVGKIVMEAAAKHLTPVTLELGGKSPCYIDRDCDLDVACRRIAWGKYMNCGQT 240
Query: 768 CIAPDYVLCEPSLQDQVVQKMKEAVKEFYGDNIKDSPDYERIVNLRHFKRIQSLLEGQKI 947
CIAPDY+LCE SLQ+Q+VQK+KE VK+FYG+NIK SPDYERI+NLRHFKR+QSLL+GQKI
Sbjct: 241 CIAPDYILCEASLQNQIVQKIKETVKDFYGENIKASPDYERIINLRHFKRLQSLLKGQKI 300
Query: 948 AFRWGDGRGHSLHSPNILTDVDPEAXVMREEIFGPIL 1058
AF +P ILTDVDP + VM+EEIFGPIL
Sbjct: 301 AFGGEMDEATRYLAPTILTDVDPNSKVMQEEIFGPIL 337
>ref|NP_001106196.1| aldehyde dehydrogenase, dimeric NADP-preferring [Mus musculus].
Length = 453
Score = 350 bits (899), Expect = 9e-97
Identities = 167/333 (50%), Positives = 228/333 (68%)
Frame = +3
Query: 60 VQRLRAAFQTGRSXXXXXXXXXXXXXXXXXXEREEXXXXXXXXXXXXXXXNAYSQEVLTI 239
V R R AF +G++ E + +Y +EV +
Sbjct: 8 VNRARDAFNSGKTRPLQFRVEQLEALQRMINENLKGISKALASNLRKNEWTSYYEEVAHV 67
Query: 240 LGEIDLALEKLPEWAAARPAEKNLLTMLDEAYVQPEPLGVMLIIGAWNYPLVLSIQPLXX 419
L EID ++ L +WA P K T D+ Y+ EPLGV+L+IGAWNYP L+IQP+
Sbjct: 68 LDEIDFTIKGLSDWAEDEPVAKTRQTQEDDLYIHSEPLGVVLVIGAWNYPFNLTIQPMVG 127
Query: 420 XXXXXXXXXXKPSEISENTAKILAKLLPQYLDQDLYAVINGGVEETTKLLEQRFDHILYT 599
KPSE+S++ A +L+ L+PQY+D+DLY VI GGV ETT+LL+++FDHI+YT
Sbjct: 128 AIAAGNAVVLKPSEVSDHMADLLSTLIPQYMDKDLYPVIKGGVPETTELLKEKFDHIMYT 187
Query: 600 GSTAVGKIVMEAAAKHLTPVTLELGGKSPCYIDPDCDLDVACRRIAWGKYMNCGQTCIAP 779
GSTAVGKIVM AAAKHLTPVTLELGGKSPCY+D DCDLDVACRRIAWGK+MN GQTC+AP
Sbjct: 188 GSTAVGKIVMAAAAKHLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKFMNSGQTCVAP 247
Query: 780 DYVLCEPSLQDQVVQKMKEAVKEFYGDNIKDSPDYERIVNLRHFKRIQSLLEGQKIAFRW 959
DY+LC+PS+Q+++V+K+K+++K+FYG++ K S DY RI+N RHF+R+ +L++ +K+A
Sbjct: 248 DYILCDPSIQNEIVEKLKKSLKDFYGEDAKQSHDYGRIINDRHFQRVINLIDSKKVAHGG 307
Query: 960 GDGRGHSLHSPNILTDVDPEAXVMREEIFGPIL 1058
+ +P IL DVDP++ VM+EEIFGP++
Sbjct: 308 TWDQPSRYIAPTILVDVDPQSPVMQEEIFGPVM 340
>ref|NP_031462.2| aldehyde dehydrogenase, dimeric NADP-preferring [Mus musculus].
Length = 453
Score = 350 bits (899), Expect = 9e-97
Identities = 167/333 (50%), Positives = 228/333 (68%)
Frame = +3
Query: 60 VQRLRAAFQTGRSXXXXXXXXXXXXXXXXXXEREEXXXXXXXXXXXXXXXNAYSQEVLTI 239
V R R AF +G++ E + +Y +EV +
Sbjct: 8 VNRARDAFNSGKTRPLQFRVEQLEALQRMINENLKGISKALASNLRKNEWTSYYEEVAHV 67
Query: 240 LGEIDLALEKLPEWAAARPAEKNLLTMLDEAYVQPEPLGVMLIIGAWNYPLVLSIQPLXX 419
L EID ++ L +WA P K T D+ Y+ EPLGV+L+IGAWNYP L+IQP+
Sbjct: 68 LDEIDFTIKGLSDWAEDEPVAKTRQTQEDDLYIHSEPLGVVLVIGAWNYPFNLTIQPMVG 127
Query: 420 XXXXXXXXXXKPSEISENTAKILAKLLPQYLDQDLYAVINGGVEETTKLLEQRFDHILYT 599
KPSE+S++ A +L+ L+PQY+D+DLY VI GGV ETT+LL+++FDHI+YT
Sbjct: 128 AIAAGNAVVLKPSEVSDHMADLLSTLIPQYMDKDLYPVIKGGVPETTELLKEKFDHIMYT 187
Query: 600 GSTAVGKIVMEAAAKHLTPVTLELGGKSPCYIDPDCDLDVACRRIAWGKYMNCGQTCIAP 779
GSTAVGKIVM AAAKHLTPVTLELGGKSPCY+D DCDLDVACRRIAWGK+MN GQTC+AP
Sbjct: 188 GSTAVGKIVMAAAAKHLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKFMNSGQTCVAP 247
Query: 780 DYVLCEPSLQDQVVQKMKEAVKEFYGDNIKDSPDYERIVNLRHFKRIQSLLEGQKIAFRW 959
DY+LC+PS+Q+++V+K+K+++K+FYG++ K S DY RI+N RHF+R+ +L++ +K+A
Sbjct: 248 DYILCDPSIQNEIVEKLKKSLKDFYGEDAKQSHDYGRIINDRHFQRVINLIDSKKVAHGG 307
Query: 960 GDGRGHSLHSPNILTDVDPEAXVMREEIFGPIL 1058
+ +P IL DVDP++ VM+EEIFGP++
Sbjct: 308 TWDQPSRYIAPTILVDVDPQSPVMQEEIFGPVM 340
>ref|NP_082821.2| aldehyde dehydrogenase 3 family, member B2-like [Mus musculus].
Length = 479
Score = 303 bits (776), Expect = 2e-82
Identities = 153/345 (44%), Positives = 204/345 (59%)
Frame = +3
Query: 24 RARDRGPAMEREVQRLRAAFQTGRSXXXXXXXXXXXXXXXXXXEREEXXXXXXXXXXXXX 203
RA E ++QRL+ AF TG++ + +
Sbjct: 9 RADQGTDPFEEKLQRLKEAFNTGKTKTAKFRAEQLQSLGRFLQDNSKQLHDALDGDLGKS 68
Query: 204 XXNAYSQEVLTILGEIDLALEKLPEWAAARPAEKNLLTMLDEAYVQPEPLGVMLIIGAWN 383
+ E++ E+DLAL+ L W P NLLT L A+++ EP G++LII WN
Sbjct: 69 GFESDMSEIILCENEVDLALKNLQTWMKDEPVSTNLLTKLSTAFIRKEPFGLVLIIAPWN 128
Query: 384 YPLVLSIQPLXXXXXXXXXXXXKPSEISENTAKILAKLLPQYLDQDLYAVINGGVEETTK 563
YP+ L I PL KPSEIS+NT K+LA+LLPQYLDQ +AV+ GG EET +
Sbjct: 129 YPVNLMIIPLVGAIAAGNCVVLKPSEISKNTEKVLAELLPQYLDQSCFAVMLGGPEETGQ 188
Query: 564 LLEQRFDHILYTGSTAVGKIVMEAAAKHLTPVTLELGGKSPCYIDPDCDLDVACRRIAWG 743
LLE +FD+I +TGS VGKIVM AAAKHLTP+TLELGGK+PCY+D +CD R+AW
Sbjct: 189 LLEHKFDYIFFTGSPRVGKIVMTAAAKHLTPITLELGGKNPCYVDDNCDPQTVANRVAWF 248
Query: 744 KYMNCGQTCIAPDYVLCEPSLQDQVVQKMKEAVKEFYGDNIKDSPDYERIVNLRHFKRIQ 923
+Y N GQTC+APDY+LC +Q+Q+V ++ A+ FYGDN + SP+ RI+N +HFKR+Q
Sbjct: 249 RYFNAGQTCVAPDYILCSQEMQEQLVPALQNAITRFYGDNPQTSPNLGRIINQKHFKRLQ 308
Query: 924 SLLEGQKIAFRWGDGRGHSLHSPNILTDVDPEAXVMREEIFGPIL 1058
LL ++A G +P +L DV VM+EEIFGPIL
Sbjct: 309 GLLGCGRVAIGGQSDEGERYIAPTVLVDVQETEPVMQEEIFGPIL 353
>ref|NP_001170909.1| aldehyde dehydrogenase 3 family, member B2 [Mus musculus].
Length = 479
Score = 302 bits (774), Expect = 3e-82
Identities = 154/347 (44%), Positives = 206/347 (59%)
Frame = +3
Query: 18 SERARDRGPAMEREVQRLRAAFQTGRSXXXXXXXXXXXXXXXXXXEREEXXXXXXXXXXX 197
SE ++ GP+ E + LR AF GR+ E +E
Sbjct: 8 SEPSQGAGPS-EATLHSLREAFNAGRTRPTEFRTAQLRSLGRFLQENKELLQDALAKDVG 66
Query: 198 XXXXNAYSQEVLTILGEIDLALEKLPEWAAARPAEKNLLTMLDEAYVQPEPLGVMLIIGA 377
+ E++ E+DLAL+ L W P NLLT L A+++ EP G++LII
Sbjct: 67 KSGFESDMSEIILCENEVDLALKNLQTWMKDEPVSTNLLTKLSSAFIRKEPFGLVLIIAP 126
Query: 378 WNYPLVLSIQPLXXXXXXXXXXXXKPSEISENTAKILAKLLPQYLDQDLYAVINGGVEET 557
WNYP+ L I PL KPSEIS+NT K+LA+LLPQYLDQ +AV+ GG EET
Sbjct: 127 WNYPVNLMIIPLVGAIAAGNCVVLKPSEISKNTEKVLAELLPQYLDQSCFAVMLGGPEET 186
Query: 558 TKLLEQRFDHILYTGSTAVGKIVMEAAAKHLTPVTLELGGKSPCYIDPDCDLDVACRRIA 737
+LLE +FD+I +TGS VGKIVM AAAKHLTP+TLELGGK+PCY+D +CD R+A
Sbjct: 187 RQLLEHKFDYIFFTGSPRVGKIVMTAAAKHLTPITLELGGKNPCYVDDNCDPQTVANRVA 246
Query: 738 WGKYMNCGQTCIAPDYVLCEPSLQDQVVQKMKEAVKEFYGDNIKDSPDYERIVNLRHFKR 917
W +Y N GQTC+APDY+LC +Q+++V ++ ++ FYGDN + SP+ RI+N +HFKR
Sbjct: 247 WFRYFNAGQTCVAPDYILCSQEMQERLVPALQNSITRFYGDNPQTSPNLGRIINQKHFKR 306
Query: 918 IQSLLEGQKIAFRWGDGRGHSLHSPNILTDVDPEAXVMREEIFGPIL 1058
+Q LL ++A G +P +L DV VM+EEIFGPIL
Sbjct: 307 LQGLLGCGRVAIGGQSDEGERYIAPTVLVDVQETEPVMQEEIFGPIL 353
>ref|NP_080592.2| aldehyde dehydrogenase family 3 member B1 [Mus musculus].
Length = 468
Score = 292 bits (748), Expect = 3e-79
Identities = 145/338 (42%), Positives = 202/338 (59%)
Frame = +3
Query: 45 AMEREVQRLRAAFQTGRSXXXXXXXXXXXXXXXXXXEREEXXXXXXXXXXXXXXXNAYSQ 224
+ E ++Q+LR AF+ GR+ + ++ A
Sbjct: 3 SFEDKLQQLREAFKEGRTRSAEFRAAQLQGLSHFLRDNKQQLQEALAQDLHKSAFEAEVS 62
Query: 225 EVLTILGEIDLALEKLPEWAAARPAEKNLLTMLDEAYVQPEPLGVMLIIGAWNYPLVLSI 404
E+ E+DLAL L W KNL T LD A+++ EP G++LII WNYP+ L++
Sbjct: 63 EIAISQAEVDLALRNLRSWMKDEKVSKNLATQLDSAFIRKEPFGLVLIIVPWNYPINLTL 122
Query: 405 QPLXXXXXXXXXXXXKPSEISENTAKILAKLLPQYLDQDLYAVINGGVEETTKLLEQRFD 584
PL KPSEIS+ T KILA++LP+YLDQ + V+ GG +ET +LLE +FD
Sbjct: 123 VPLVGAIAAGNCVVLKPSEISKATEKILAEVLPRYLDQSCFTVVLGGRQETGQLLEHKFD 182
Query: 585 HILYTGSTAVGKIVMEAAAKHLTPVTLELGGKSPCYIDPDCDLDVACRRIAWGKYMNCGQ 764
+I +TG+ VGKIVM AAAKHLTP+TLELGGK+PCY+D +CD + R+AW +Y N GQ
Sbjct: 183 YIFFTGNAYVGKIVMAAAAKHLTPITLELGGKNPCYVDDNCDPQIVANRVAWFRYFNAGQ 242
Query: 765 TCIAPDYVLCEPSLQDQVVQKMKEAVKEFYGDNIKDSPDYERIVNLRHFKRIQSLLEGQK 944
TC+APDY+LC +Q+++V ++ A+ FYGDN + SP+ RI+N +HFKR+Q LL +
Sbjct: 243 TCVAPDYILCSQEMQERLVPALQNAITRFYGDNPQTSPNLGRIINQKHFKRLQGLLGCGR 302
Query: 945 IAFRWGDGRGHSLHSPNILTDVDPEAXVMREEIFGPIL 1058
+A G +P +L DV VM+EEIFGPIL
Sbjct: 303 VAIGGQSDEGERYIAPTVLVDVQETEPVMQEEIFGPIL 340
>ref|NP_038495.2| retinal dehydrogenase 1 [Mus musculus].
Length = 501
Score = 114 bits (284), Expect = 2e-25
Identities = 90/300 (30%), Positives = 145/300 (48%), Gaps = 18/300 (6%)
Frame = +3
Query: 216 YSQEVLTILGEIDLALEKLPEWA-----AARPAEKNLLTMLDEAYVQPEPLGVMLIIGAW 380
++ L+ LG AL+ WA P++ ++ T Y + EP+GV I W
Sbjct: 115 FANAYLSDLGGCIKALKYCAGWADKIHGQTIPSDGDIFT-----YTRREPIGVCGQIIPW 169
Query: 381 NYPLVLSIQPLXXXXXXXXXXXXKPSEISENTAKILAKLLPQY-LDQDLYAVINGGVEET 557
N+P+++ I + KP+E + TA LA L+ + + ++ G
Sbjct: 170 NFPMLMFIWKIGPALSCGNTVVVKPAEQTPLTALHLASLIKEAGFPPGVVNIVPGYGPTA 229
Query: 558 TKLLEQRFD--HILYTGSTAVGKIVMEAAAK-HLTPVTLELGGKSPCYIDPDCDLDVACR 728
+ D + +TGST VGK++ EAA K +L VTLELGGKSPC + D DLD+A
Sbjct: 230 GAAISSHMDVDKVAFTGSTQVGKLIKEAAGKSNLKRVTLELGGKSPCIVFADADLDIAVE 289
Query: 729 RIAWGKYMNCGQTCIAPDYVLCEPSLQDQVVQKMKEAVKEFYGDN-----IKDSPDYERI 893
G + + GQ C+A + E S+ D+ V++ E K++ N I P ++
Sbjct: 290 FAHHGVFYHQGQCCVAASRIFVEESVYDEFVKRSVERAKKYVLGNPLTPGINQGPQIDKE 349
Query: 894 VNLRHFKRIQS-LLEGQKI---AFRWGDGRGHSLHSPNILTDVDPEAXVMREEIFGPILQ 1061
+ + I+S EG K+ RWG+ +G + P + ++V E + +EEIFGP+ Q
Sbjct: 350 QHDKILDLIESGKKEGAKLECGGGRWGN-KGFFV-QPTVFSNVTDEMRIAKEEIFGPVQQ 407
>ref|NP_036051.1| aldehyde dehydrogenase, cytosolic 1 [Mus musculus].
Length = 501
Score = 108 bits (271), Expect = 6e-24
Identities = 84/269 (31%), Positives = 131/269 (48%), Gaps = 13/269 (4%)
Frame = +3
Query: 294 PAEKNLLTMLDEAYVQPEPLGVMLIIGAWNYPLVLSIQPLXXXXXXXXXXXXKPSEISEN 473
P++ N+ T Y + EP+GV I WN PL++ L KP+E +
Sbjct: 146 PSDGNIFT-----YTRREPIGVCGQIIPWNGPLIIFTWKLGPALSCGNTVVVKPAEQTPL 200
Query: 474 TAKILAKLLPQY-LDQDLYAVINGGVEETTKLLEQRFD--HILYTGSTAVGKIVMEAAAK 644
TA +A L+ + + ++ G + D + +TGST VGK++ EAA K
Sbjct: 201 TALHMASLIKEAGFPPGVVNIVPGYGPTAGGAISSHMDIDKVSFTGSTEVGKLIKEAAGK 260
Query: 645 -HLTPVTLELGGKSPCYIDPDCDLDVACRRIAWGKYMNCGQTCIAPDYVLCEPSLQDQVV 821
+L VTLELGGKSPC + D DLD A G + + GQ C+A + E S+ D+ V
Sbjct: 261 SNLKRVTLELGGKSPCIVFADADLDSAVEFAHQGVFFHQGQICVAASRLFVEESIYDEFV 320
Query: 822 QKMKEAVKEFYGDN-----IKDSPDYERIVNLRHFKRIQS-LLEGQKI---AFRWGDGRG 974
++ E K++ N I P ++ + + I+S EG K+ RWG+ +G
Sbjct: 321 RRSVERAKKYILGNPLNSGINQGPQIDKEQHNKILGLIESGKKEGAKLECGGGRWGN-KG 379
Query: 975 HSLHSPNILTDVDPEAXVMREEIFGPILQ 1061
+ P + ++V E + +EEIFGP+ Q
Sbjct: 380 FFV-QPTVFSNVTDEMRIAKEEIFGPVQQ 407
>ref|NP_444310.3| aldehyde dehydrogenase family 1 member A3 [Mus musculus].
Length = 512
Score = 104 bits (259), Expect = 1e-22
Identities = 78/252 (30%), Positives = 117/252 (46%), Gaps = 11/252 (4%)
Frame = +3
Query: 333 YVQPEPLGVMLIIGAWNYPLVLSIQPLXXXXXXXXXXXXKPSEISENTAKILAKLLPQYL 512
+ + EP+GV I WN+PL++ L KP+E + TA LA L+ +
Sbjct: 165 FTRHEPIGVCGAITPWNFPLLMLAWKLAPALCCGNTVVLKPAEQTPLTALYLASLIKEVG 224
Query: 513 DQDLYAVINGGVEETTKLL---EQRFDHILYTGSTAVGKIVMEAAAK-HLTPVTLELGGK 680
I G T + + I +TGST VGK+V EAA++ +L VTLELGGK
Sbjct: 225 FPPGVVNIVPGFGPTVGAAISSHPQINKIAFTGSTEVGKLVREAASRSNLKRVTLELGGK 284
Query: 681 SPCYIDPDCDLDVACRRIAWGKYMNCGQTCIAPDYVLCEPSLQDQVVQKMKE-AVKEFYG 857
+PC + D DLD+A G + N GQ C A V E + + V++ E A K G
Sbjct: 285 NPCIVCADADLDLAVECAHQGVFFNQGQCCTAASRVFVEEQVYGEFVRRSVEFAKKRPVG 344
Query: 858 DNIKDSPDYERIVNLRHFKRIQSLLEGQKIAFRWGDGRGHSLH------SPNILTDVDPE 1019
D + ++ + F +I L+E K + G ++ P + +DV
Sbjct: 345 DPFDAKTEQGPQIDQKQFDKILELIESGKKEGAKLECGGSAMEDRGLFIKPTVFSDVTDN 404
Query: 1020 AXVMREEIFGPI 1055
+ +EEIFGP+
Sbjct: 405 MRIAKEEIFGPV 416
>ref|NP_064377.2| 4-trimethylaminobutyraldehyde dehydrogenase [Mus musculus].
Length = 518
Score = 103 bits (257), Expect = 2e-22
Identities = 73/257 (28%), Positives = 121/257 (47%), Gaps = 15/257 (5%)
Frame = +3
Query: 333 YVQPEPLGVMLIIGAWNYPLVLSIQPLXXXXXXXXXXXXKPSEISENTAKILAKLLPQY- 509
Y + EPLGV + IGAWNYP ++ KPS + +A +LA++ +
Sbjct: 165 YTRREPLGVCVGIGAWNYPFQIACWKSAPALACGNAMIFKPSPFTPVSALLLAEIYTKAG 224
Query: 510 LDQDLYAVINGGVEETTKLLEQR-FDHILYTGSTAVGKIVMEAAAKHLTPVTLELGGKSP 686
L+ V+ GG L R I +TGS G +ME +AK + P+TLELGGKSP
Sbjct: 225 APPGLFNVVQGGAATGQFLCHHREVAKISFTGSVPTGVKIMEMSAKGVKPITLELGGKSP 284
Query: 687 CYIDPDCDLDVACRRIAWGKYMNCGQTCIAPDYVLCEPSLQDQVVQK-MKEAVKEFYGDN 863
I DC+++ A + ++ GQ C V + + D+ + + +K+ K GD
Sbjct: 285 LIIFSDCNMENAVKGALMANFLTQGQVCCNGTRVFVQKEIADKFINEVVKQTQKIKLGDP 344
Query: 864 IKDSPDYERIVNLRHFKRI-----------QSLLEGQKIAFRWGDGRGHSLH-SPNILTD 1007
+ + ++N H +R+ ++L G ++ H + +P ILT+
Sbjct: 345 LLEDTRMGPLINAPHLERVLGFVKLAKEQGATVLCGGEVYVPEDPKLKHGYYMTPCILTN 404
Query: 1008 VDPEAXVMREEIFGPIL 1058
+ ++EEIFGP++
Sbjct: 405 CRDDMTCVKEEIFGPVM 421
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 33,264,174
Number of extensions: 839791
Number of successful extensions: 3260
Number of sequences better than 1.0e-05: 22
Number of HSP's gapped: 3207
Number of HSP's successfully gapped: 22
Length of query: 366
Length of database: 15,617,559
Length adjustment: 103
Effective length of query: 263
Effective length of database: 12,523,851
Effective search space: 3293772813
Effective search space used: 3293772813
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007406
(1099 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_003132080.1| PREDICTED: fatty aldehyde dehydrogenase-like... 535 e-152
Alignment gi|XP_003132084.2| PREDICTED: aldehyde dehydrogenase, dimeric N... 375 e-104
Alignment gi|XP_003353786.1| PREDICTED: LOW QUALITY PROTEIN: aldehyde deh... 291 6e-79
Alignment gi|XP_001924895.1| PREDICTED: 4-trimethylaminobutyraldehyde deh... 103 2e-22
Alignment gi|XP_001926622.3| PREDICTED: aldehyde dehydrogenase family 1 m... 101 6e-22
Alignment gi|XP_001925921.3| PREDICTED: aldehyde dehydrogenase family 1 m... 101 8e-22
Alignment gi|XP_003359162.1| PREDICTED: aldehyde dehydrogenase, mitochond... 91 1e-18
Alignment gi|XP_003132963.2| PREDICTED: aldehyde dehydrogenase, mitochond... 91 1e-18
Alignment gi|NP_001038076.1| aldehyde dehydrogenase, mitochondrial precur... 91 1e-18
Alignment gi|XP_003353634.1| PREDICTED: aldehyde dehydrogenase X, mitocho... 89 6e-18
>ref|XP_003132080.1| PREDICTED: fatty aldehyde dehydrogenase-like [Sus scrofa].
Length = 485
Score = 535 bits (1378), Expect = e-152
Identities = 278/337 (82%), Positives = 279/337 (82%)
Frame = +3
Query: 48 MEREVQRLRAAFQTGRSXXXXXXXXXXXXXXXXXXEREEXXXXXXXXXXXXXXXNAYSQE 227
MEREVQRLRAAFQTGRS EREE NAYSQE
Sbjct: 1 MEREVQRLRAAFQTGRSRPLAFRLQQLQALRRMVQEREEDLLAAIAADLSKSKLNAYSQE 60
Query: 228 VLTILGEIDLALEKLPEWAAARPAEKNLLTMLDEAYVQPEPLGVMLIIGAWNYPLVLSIQ 407
VLTILGEIDLALEKLPEWAAARPAEKNLLTMLDEAYVQPEPLGVMLIIGAWNYPLVLSIQ
Sbjct: 61 VLTILGEIDLALEKLPEWAAARPAEKNLLTMLDEAYVQPEPLGVMLIIGAWNYPLVLSIQ 120
Query: 408 PLXXXXXXXXXXXXKPSEISENTAKILAKLLPQYLDQDLYAVINGGVEETTKLLEQRFDH 587
PL KPSEISENTAKILAKLLPQYLDQDLYAVINGGVEETTKLLEQRFDH
Sbjct: 121 PLIGAIAAGNAVIIKPSEISENTAKILAKLLPQYLDQDLYAVINGGVEETTKLLEQRFDH 180
Query: 588 ILYTGSTAVGKIVMEAAAKHLTPVTLELGGKSPCYIDPDCDLDVACRRIAWGKYMNCGQT 767
ILYTGSTAVGKIVMEAAAKHLTPVTLELGGKSPCYIDPDCDLDVACRRIAWGKYMNCGQT
Sbjct: 181 ILYTGSTAVGKIVMEAAAKHLTPVTLELGGKSPCYIDPDCDLDVACRRIAWGKYMNCGQT 240
Query: 768 CIAPDYVLCEPSLQDQVVQKMKEAVKEFYGDNIKDSPDYERIVNLRHFKRIQSLLEGQKI 947
CIAPDYVLCEPSLQDQVVQKMKEAVKEFYGDNIKDSPDYERIVNLRHFKRIQSLLEGQKI
Sbjct: 241 CIAPDYVLCEPSLQDQVVQKMKEAVKEFYGDNIKDSPDYERIVNLRHFKRIQSLLEGQKI 300
Query: 948 AFRWGDGRGHSLHSPNILTDVDPEAXVMREEIFGPIL 1058
AF +P ILTDVDPEA VMREEIFGPIL
Sbjct: 301 AFGGETDEATRYIAPTILTDVDPEAKVMREEIFGPIL 337
>ref|XP_003132084.2| PREDICTED: aldehyde dehydrogenase, dimeric NADP-preferring, partial
[Sus scrofa].
Length = 566
Score = 375 bits (962), Expect = e-104
Identities = 172/283 (60%), Positives = 222/283 (78%)
Frame = +3
Query: 210 NAYSQEVLTILGEIDLALEKLPEWAAARPAEKNLLTMLDEAYVQPEPLGVMLIIGAWNYP 389
NAY +E++ +L EI+ ++KLPEWAA P EK T DE Y+ EPLGV+LIIGAWNYP
Sbjct: 39 NAYYEEMVYVLEEIEHVIKKLPEWAADEPVEKTPQTQQDEPYIHSEPLGVVLIIGAWNYP 98
Query: 390 LVLSIQPLXXXXXXXXXXXXKPSEISENTAKILAKLLPQYLDQDLYAVINGGVEETTKLL 569
L+IQP+ KPSE+SENT ++LA L+PQYLD+DLY V+ GGV ETT+LL
Sbjct: 99 FNLTIQPMVGAIAAGNAVVIKPSELSENTERLLATLIPQYLDKDLYHVVTGGVPETTELL 158
Query: 570 EQRFDHILYTGSTAVGKIVMEAAAKHLTPVTLELGGKSPCYIDPDCDLDVACRRIAWGKY 749
++RFDHILYTGS +GK+VM AAAKHLTPVTLELGGK+PCY+D DCDLDVACRRIAWGK+
Sbjct: 159 KERFDHILYTGSPGIGKVVMTAAAKHLTPVTLELGGKNPCYVDKDCDLDVACRRIAWGKF 218
Query: 750 MNCGQTCIAPDYVLCEPSLQDQVVQKMKEAVKEFYGDNIKDSPDYERIVNLRHFKRIQSL 929
MN GQTC+ PDY+LC+PS+Q+Q+V+K+K+++KEFYG++ + S DY RI+N RHF+R+ L
Sbjct: 219 MNSGQTCVGPDYILCDPSIQNQIVEKLKKSLKEFYGEDARKSRDYGRIINSRHFQRVMGL 278
Query: 930 LEGQKIAFRWGDGRGHSLHSPNILTDVDPEAXVMREEIFGPIL 1058
LEGQK+A+ +P ILTDVDP++ VM+EEIFGP++
Sbjct: 279 LEGQKVAYGGTGDAATRYIAPTILTDVDPQSQVMQEEIFGPLM 321
>ref|XP_003353786.1| PREDICTED: LOW QUALITY PROTEIN: aldehyde dehydrogenase family 3
member B1-like [Sus scrofa].
Length = 486
Score = 291 bits (744), Expect = 6e-79
Identities = 146/333 (43%), Positives = 200/333 (60%)
Frame = +3
Query: 60 VQRLRAAFQTGRSXXXXXXXXXXXXXXXXXXEREEXXXXXXXXXXXXXXXNAYSQEVLTI 239
+QRLR AF +GR+ E ++ E+L
Sbjct: 28 LQRLREAFSSGRTRPVEFRATQLKGLGRFLQENKQLLQEALAQDLRKSAFEGDMCEILLC 87
Query: 240 LGEIDLALEKLPEWAAARPAEKNLLTMLDEAYVQPEPLGVMLIIGAWNYPLVLSIQPLXX 419
E+DLAL+ L W +P KNL T LD A+++ EP G++LII WNYP+ L++ PL
Sbjct: 88 QNEVDLALKNLHTWTKDKPVAKNLFTQLDSAFIRKEPFGLVLIIAPWNYPVNLTLMPLVG 147
Query: 420 XXXXXXXXXXKPSEISENTAKILAKLLPQYLDQDLYAVINGGVEETTKLLEQRFDHILYT 599
KPSEIS++T K+LA++LP+YLDQ +AV+ GG EET +LLE +FD+I +T
Sbjct: 148 ALAAGNCVVLKPSEISKSTEKVLAEVLPRYLDQSCFAVVLGGPEETGQLLEHKFDYIFFT 207
Query: 600 GSTAVGKIVMEAAAKHLTPVTLELGGKSPCYIDPDCDLDVACRRIAWGKYMNCGQTCIAP 779
GS VG IVM AAAKHLTPVTLELGGK+PCY+D +CD R+A +Y+N GQTC+AP
Sbjct: 208 GSPRVGXIVMTAAAKHLTPVTLELGGKNPCYVDDNCDPQTVANRVALFRYLNTGQTCVAP 267
Query: 780 DYVLCEPSLQDQVVQKMKEAVKEFYGDNIKDSPDYERIVNLRHFKRIQSLLEGQKIAFRW 959
DY+LC P Q +++ ++ A+ FYGD+ + SPD RI+N +HF+R+Q LL ++A
Sbjct: 268 DYILCSPETQARLLPALQSAITRFYGDDPRASPDLGRIINHKHFQRLQGLLSCGRVAIGG 327
Query: 960 GDGRGHSLHSPNILTDVDPEAXVMREEIFGPIL 1058
+P +L DV VM+EEIFGPIL
Sbjct: 328 QSDDSDRYIAPTVLVDVQETEPVMQEEIFGPIL 360
>ref|XP_001924895.1| PREDICTED: 4-trimethylaminobutyraldehyde dehydrogenase [Sus scrofa].
Length = 596
Score = 103 bits (256), Expect = 2e-22
Identities = 77/260 (29%), Positives = 125/260 (48%), Gaps = 18/260 (6%)
Frame = +3
Query: 333 YVQPEPLGVMLIIGAWNYPLVLSIQPLXXXXXXXXXXXXKPSEISENTAKILAKLLPQY- 509
Y + EPLGV + IGAWNYP ++ KPS + + +LA++ +
Sbjct: 243 YTRREPLGVCVGIGAWNYPFQIACWKSAPALACGNAMIFKPSPFTPLSVLLLAEIYTEAG 302
Query: 510 LDQDLYAVINGGVEETTKLLEQRFD--HILYTGSTAVGKIVMEAAAKHLTPVTLELGGKS 683
+ L+ V+ GG T +LL Q D I +TGS G +ME +AK + PVTLELGGKS
Sbjct: 303 VPPGLFNVVQGGAT-TGQLLCQHRDVAKISFTGSVPTGSKIMEMSAKGIKPVTLELGGKS 361
Query: 684 PCYIDPDCDLDVACRRIAWGKYMNCGQTCIAPDYVLCEPSLQDQVVQK-MKEAVKEFYGD 860
P I DCD+ A + ++ G+ C V + + D+ ++ +K+ + GD
Sbjct: 362 PLIIFSDCDMGNAVKGALMANFLTQGEVCCNGTRVFVQKEILDKFTEEVVKQTQRIKIGD 421
Query: 861 NIKDSPDYERIVNLRHFKRIQSLL-----EGQKIAFRWGD---------GRGHSLHSPNI 998
+ + ++N H +RI + +G K+ GD G+ + P +
Sbjct: 422 PLLEDTRMGPLINRPHLERILGFVKVAKEQGAKV-LCGGDLYVPEDPKLKEGYYMR-PCV 479
Query: 999 LTDVDPEAXVMREEIFGPIL 1058
LT+ + ++EEIFGP++
Sbjct: 480 LTNCRDDMTCVKEEIFGPVM 499
>ref|XP_001926622.3| PREDICTED: aldehyde dehydrogenase family 1 member L2, mitochondrial
[Sus scrofa].
Length = 923
Score = 101 bits (252), Expect = 6e-22
Identities = 75/253 (29%), Positives = 123/253 (48%), Gaps = 11/253 (4%)
Frame = +3
Query: 333 YVQPEPLGVMLIIGAWNYPLVLSIQPLXXXXXXXXXXXXKPSEISENTAKILAKL-LPQY 509
+ + EP+GV II WNYPL++ KP++++ TA A+L +
Sbjct: 579 FTKKEPIGVCAIIIPWNYPLMMLAWKSAACLAAGNTLVLKPAQVTPLTALKFAELSVKAG 638
Query: 510 LDQDLYAVINGGVEETTKLLEQRFD--HILYTGSTAVGKIVMEAAA-KHLTPVTLELGGK 680
+ + +I G + L + D + +TGST +GK +M++ A +L V+LELGGK
Sbjct: 639 FPKGVINIIPGSGGIAGQRLSEHPDIRKLGFTGSTPIGKQIMKSCAVSNLKKVSLELGGK 698
Query: 681 SPCYIDPDCDLDVACRRIAWGKYMNCGQTCIAPDYVLCEPSLQDQVVQKMKEAVKEF-YG 857
SP I DC+LD A R + N G+ CIA + E S+ D+ V ++ E +K+ G
Sbjct: 699 SPLLIFNDCELDKAVRMGMGAVFFNKGENCIAAGRLFVEESIHDEFVTRVVEEIKKMKIG 758
Query: 858 DNIKDSPDYERIVNLRHFKRI-----QSLLEGQKIAFRWGD-GRGHSLHSPNILTDVDPE 1019
D + S D+ + H +++ + EG + + R P + TDV+
Sbjct: 759 DPLDRSTDHGPQNHKAHLEKLLQYCEAGVKEGATLVYGGRQVQRPGFFMEPTVFTDVEDH 818
Query: 1020 AXVMREEIFGPIL 1058
+ +EE FGPI+
Sbjct: 819 MYLAKEESFGPIM 831
>ref|XP_001925921.3| PREDICTED: aldehyde dehydrogenase family 1 member A3, partial [Sus
scrofa].
Length = 655
Score = 101 bits (251), Expect = 8e-22
Identities = 76/252 (30%), Positives = 117/252 (46%), Gaps = 11/252 (4%)
Frame = +3
Query: 333 YVQPEPLGVMLIIGAWNYPLVLSIQPLXXXXXXXXXXXXKPSEISENTAKILAKLLPQYL 512
+ + EP+GV I WN+PL++ + L KP+E + TA L L+ +
Sbjct: 308 FTRHEPIGVCGAITPWNFPLLMLVWKLAPALCCGNTVVVKPAEQTPLTALHLGSLIREVG 367
Query: 513 DQDLYAVINGGVEETTKLL---EQRFDHILYTGSTAVGKIVMEAAAK-HLTPVTLELGGK 680
I G T + + I +TGST VGK+V EAA++ +L VTLELGGK
Sbjct: 368 FPPGVVNIVPGFGPTVGAAISSHPQINKIAFTGSTEVGKLVKEAASRSNLKRVTLELGGK 427
Query: 681 SPCYIDPDCDLDVACRRIAWGKYMNCGQTCIAPDYVLCEPSLQDQVVQKMKE-AVKEFYG 857
+PC + D DLD+A G + N GQ C A V E + + V++ E A K G
Sbjct: 428 NPCIVCADADLDLAVECAHQGVFFNQGQCCTAASRVFVEEQVYSEFVKRSVEYAKKRPVG 487
Query: 858 DNIKDSPDYERIVNLRHFKRIQSLLEGQKIAFRWGDGRGHSLH------SPNILTDVDPE 1019
D + ++ + F +I L+E K + G ++ P + ++V
Sbjct: 488 DPFDVRTEQGPQIDQKQFNKILDLIESGKKEGAKLECGGSAMEDRGLFIKPTVFSEVTDT 547
Query: 1020 AXVMREEIFGPI 1055
+ +EEIFGP+
Sbjct: 548 MRIAKEEIFGPV 559
>ref|XP_003359162.1| PREDICTED: aldehyde dehydrogenase, mitochondrial-like isoform 2 [Sus
scrofa].
Length = 474
Score = 90.5 bits (223), Expect = 1e-18
Identities = 81/293 (27%), Positives = 129/293 (44%), Gaps = 15/293 (5%)
Frame = +3
Query: 228 VLTILGEIDLALEKLPEWAAARPAEKNLLTMLDE---AYVQPEPLGVMLIIGAWNYPLVL 398
V++ L ++D+ L+ L +A +D +Y + EP+GV I WN+PL++
Sbjct: 89 VISYLVDLDMVLKCLRYYAGWADKYHGKTLPIDGDYFSYTRHEPVGVCGQIIPWNFPLLM 148
Query: 399 SIQPLXXXXXXXXXXXXKPSEISENTAKILAKLLPQYLDQDLYAVINGGVEETTKLL--- 569
L K SE + TA +A L+ + I G T
Sbjct: 149 QAWKLGPALATGNVVVMKVSEQTPLTALYVANLIKEAGFPPGVVNIVPGYGPTAGAAIAS 208
Query: 570 EQRFDHILYTGSTAVGKIVMEAAAK-HLTPVTLELGGKSPCYIDPDCDLDVACRRIAWGK 746
+ D + +TGST VG ++ AA K +L VTLELGGKSP I D D+D A + +
Sbjct: 209 HEDVDKVAFTGSTEVGHLIQVAAGKSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFAL 268
Query: 747 YMNCGQTCIAPDYVLCEPSLQDQVVQK-MKEAVKEFYGDNIKDSPDYERIVNLRHFKRIQ 923
+ N GQ C A + + + V++ + A G+ + ++ FK+I
Sbjct: 269 FFNQGQCCCAGSRTFVQEDIYAEFVERSVARARSRVVGNPFDSRTEQGPQIDETQFKKIL 328
Query: 924 SLL-----EGQKIAFRWGDG--RGHSLHSPNILTDVDPEAXVMREEIFGPILQ 1061
+ EG K+ G RG+ + P + DV + +EEIFGP++Q
Sbjct: 329 GYIKSGKEEGAKLLCGGGAAADRGYFI-QPTVFGDVQDGMTIAKEEIFGPVMQ 380
>ref|XP_003132963.2| PREDICTED: aldehyde dehydrogenase, mitochondrial-like isoform 1 [Sus
scrofa].
Length = 521
Score = 90.5 bits (223), Expect = 1e-18
Identities = 81/293 (27%), Positives = 129/293 (44%), Gaps = 15/293 (5%)
Frame = +3
Query: 228 VLTILGEIDLALEKLPEWAAARPAEKNLLTMLDE---AYVQPEPLGVMLIIGAWNYPLVL 398
V++ L ++D+ L+ L +A +D +Y + EP+GV I WN+PL++
Sbjct: 136 VISYLVDLDMVLKCLRYYAGWADKYHGKTLPIDGDYFSYTRHEPVGVCGQIIPWNFPLLM 195
Query: 399 SIQPLXXXXXXXXXXXXKPSEISENTAKILAKLLPQYLDQDLYAVINGGVEETTKLL--- 569
L K SE + TA +A L+ + I G T
Sbjct: 196 QAWKLGPALATGNVVVMKVSEQTPLTALYVANLIKEAGFPPGVVNIVPGYGPTAGAAIAS 255
Query: 570 EQRFDHILYTGSTAVGKIVMEAAAK-HLTPVTLELGGKSPCYIDPDCDLDVACRRIAWGK 746
+ D + +TGST VG ++ AA K +L VTLELGGKSP I D D+D A + +
Sbjct: 256 HEDVDKVAFTGSTEVGHLIQVAAGKSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFAL 315
Query: 747 YMNCGQTCIAPDYVLCEPSLQDQVVQK-MKEAVKEFYGDNIKDSPDYERIVNLRHFKRIQ 923
+ N GQ C A + + + V++ + A G+ + ++ FK+I
Sbjct: 316 FFNQGQCCCAGSRTFVQEDIYAEFVERSVARARSRVVGNPFDSRTEQGPQIDETQFKKIL 375
Query: 924 SLL-----EGQKIAFRWGDG--RGHSLHSPNILTDVDPEAXVMREEIFGPILQ 1061
+ EG K+ G RG+ + P + DV + +EEIFGP++Q
Sbjct: 376 GYIKSGKEEGAKLLCGGGAAADRGYFI-QPTVFGDVQDGMTIAKEEIFGPVMQ 427
>ref|NP_001038076.1| aldehyde dehydrogenase, mitochondrial precursor [Sus scrofa].
Length = 521
Score = 90.5 bits (223), Expect = 1e-18
Identities = 81/293 (27%), Positives = 129/293 (44%), Gaps = 15/293 (5%)
Frame = +3
Query: 228 VLTILGEIDLALEKLPEWAAARPAEKNLLTMLDE---AYVQPEPLGVMLIIGAWNYPLVL 398
V++ L ++D+ L+ L +A +D +Y + EP+GV I WN+PL++
Sbjct: 136 VISYLVDLDMVLKCLRYYAGWADKYHGKTLPIDGDYFSYTRHEPVGVCGQIIPWNFPLLM 195
Query: 399 SIQPLXXXXXXXXXXXXKPSEISENTAKILAKLLPQYLDQDLYAVINGGVEETTKLL--- 569
L K SE + TA +A L+ + I G T
Sbjct: 196 QAWKLGPALATGNVVVMKVSEQTPLTALYVANLIKEAGFPPGVVNIVPGYGPTAGAAIAS 255
Query: 570 EQRFDHILYTGSTAVGKIVMEAAAK-HLTPVTLELGGKSPCYIDPDCDLDVACRRIAWGK 746
+ D + +TGST VG ++ AA K +L VTLELGGKSP I D D+D A + +
Sbjct: 256 HEDVDKVAFTGSTEVGHLIQVAAGKSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFAL 315
Query: 747 YMNCGQTCIAPDYVLCEPSLQDQVVQK-MKEAVKEFYGDNIKDSPDYERIVNLRHFKRIQ 923
+ N GQ C A + + + V++ + A G+ + ++ FK+I
Sbjct: 316 FFNQGQCCCAGSRTFVQEDIYAEFVERSVARARSRVVGNPFDSRTEQGPQIDETQFKKIL 375
Query: 924 SLL-----EGQKIAFRWGDG--RGHSLHSPNILTDVDPEAXVMREEIFGPILQ 1061
+ EG K+ G RG+ + P + DV + +EEIFGP++Q
Sbjct: 376 GYIKSGKEEGAKLLCGGGAAADRGYFI-QPTVFGDVQDGMTIAKEEIFGPVMQ 427
>ref|XP_003353634.1| PREDICTED: aldehyde dehydrogenase X, mitochondrial [Sus scrofa].
Length = 517
Score = 88.6 bits (218), Expect = 6e-18
Identities = 72/254 (28%), Positives = 118/254 (46%), Gaps = 13/254 (5%)
Frame = +3
Query: 333 YVQPEPLGVMLIIGAWNYPLVLSIQPLXXXXXXXXXXXXKPSEISENTAKILAKLLPQY- 509
+ + EP+GV I WN+PLV+ L K +E + +A LA L+ +
Sbjct: 170 FTRHEPVGVCGQIIPWNFPLVMQAWKLAPALATGNTVVMKVAEQTPLSALYLASLIKEVG 229
Query: 510 LDQDLYAVINGGVEETTKLLEQRFD--HILYTGSTAVGKIVMEAAA-KHLTPVTLELGGK 680
+ ++ G + D + +TGST VG ++ +AA +L VTLELGGK
Sbjct: 230 FPPGVVNILTGYGPTAGTAIAHHMDVNKVAFTGSTEVGHLIQKAAGDSNLKRVTLELGGK 289
Query: 681 SPCYIDPDCDLDVACRRIAWGKYMNCGQTCIAPDYVLCEPSLQDQVVQK-MKEAVKEFYG 857
SP + D D+D A + + N GQ C A E S+ D+ +++ +++A + G
Sbjct: 290 SPSIVLADADMDHAVEQCHEALFFNMGQCCCAGSRTFVEESIYDEFLERTVEKAKRRKVG 349
Query: 858 DNIKDSPDYERIVNLRHFKRIQSLL-----EGQKI---AFRWGDGRGHSLHSPNILTDVD 1013
+ + VN F+RI + EG K+ R+G+ RG + P + V
Sbjct: 350 NPFELDTQQGPQVNKEQFERILGYIQLGQKEGAKLLCGGERFGE-RGFFI-KPTVFGGVQ 407
Query: 1014 PEAXVMREEIFGPI 1055
+ + +EEIFGP+
Sbjct: 408 DDMRIAKEEIFGPV 421
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 24,819,541
Number of extensions: 640489
Number of successful extensions: 2488
Number of sequences better than 1.0e-05: 14
Number of HSP's gapped: 2457
Number of HSP's successfully gapped: 14
Length of query: 366
Length of database: 11,343,932
Length adjustment: 100
Effective length of query: 266
Effective length of database: 8,854,232
Effective search space: 2355225712
Effective search space used: 2355225712
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007406
(1099 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr12 458 e-126
>Sscrofa_Chr12
|| Length = 63588571
Score = 458 bits (231), Expect = e-126
Identities = 234/235 (99%)
Strand = Plus / Plus
Query: 199 agagcaaactcaatgcctacagtcaagaagtccttacgattcttggggaaattgatctgg 258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62593998 agagcaaactcaatgcctacagtcaagaagtccttacgattcttggggaaattgatctgg 62594057
Query: 259 cgctggagaagcttcccgaatgggctgcagctcggccagcggagaagaacctgctaacca 318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62594058 cgctggagaagcttcccgaatgggctgcagctcggccagcggagaagaacctgctaacca 62594117
Query: 319 tgcttgacgaggcctatgtccagccagagcccctgggtgtcatgctgatcattggcgcgt 378
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62594118 tgcttgacgaggcgtatgtccagccagagcccctgggtgtcatgctgatcattggcgcgt 62594177
Query: 379 ggaactaccccttggttctctccatccagcctctgataggagccatcgctgcagg 433
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62594178 ggaactaccccttggttctctccatccagcctctgataggagccatcgctgcagg 62594232
Score = 369 bits (186), Expect = 2e-99
Identities = 203/211 (96%)
Strand = Plus / Plus
Query: 517 aggacctgtacgctgtcatcaatggcggcgtcgaggaaaccacgaagctgctggagcagc 576
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 62596294 aggacctgtacgctgtcatcaatggcggcgttgaggaaaccacgaagctgctggagcagc 62596353
Query: 577 gatttgaccacattctctacacgggaagcaccgcggtggggaagattgtcatggaagccg 636
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62596354 gatttgaccacattctctacacgggaagcaccgcggtggggaagattgtcatggaagccg 62596413
Query: 637 ctgccaagcatttgacccctgtgacccttgaactnnnnnnnaagagcccgtgttacattg 696
|||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 62596414 ctgccaagcatttgacccctgtgacccttgaactgggggggaagagcccgtgttacattg 62596473
Query: 697 acccagactgtgacctggacgtcgcctgcag 727
|||||||||||||||||||||||||||||||
Sbjct: 62596474 acccagactgtgacctggacgtcgcctgcag 62596504
Score = 323 bits (163), Expect = 1e-85
Identities = 163/163 (100%)
Strand = Plus / Plus
Query: 38 aggaccggccatggagcgcgaagtccagcgattgcgcgccgcgttccagacgggccgatc 97
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62592167 aggaccggccatggagcgcgaagtccagcgattgcgcgccgcgttccagacgggccgatc 62592226
Query: 98 gcgccctctggccttccggctgcagcagctccaggccctgcgcaggatggtgcaggagcg 157
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62592227 gcgccctctggccttccggctgcagcagctccaggccctgcgcaggatggtgcaggagcg 62592286
Query: 158 cgaggaggacctgctggcggccatcgccgcggatctgagcaag 200
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62592287 cgaggaggacctgctggcggccatcgccgcggatctgagcaag 62592329
Score = 272 bits (137), Expect = 4e-70
Identities = 144/145 (99%), Gaps = 1/145 (0%)
Strand = Plus / Plus
Query: 844 aggaattttatggagataatataaaagactctccggactatgaaaggatcgtcaatctcc 903
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62599386 aggaattttatggagataatataaaagactctccggactatgaaaggatcgtcaatctcc 62599445
Query: 904 gtcatttcaagaggatacagagtctgctcgagggacagaagatagcctttcggtggggag 963
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 62599446 gtcatttcaagaggatacagagtctgctcgagggacagaagatagcc-ttcggtggggag 62599504
Query: 964 acggacgaggccactcgctacatag 988
|||||||||||||||||||||||||
Sbjct: 62599505 acggacgaggccactcgctacatag 62599529
Score = 242 bits (122), Expect = 3e-61
Identities = 122/122 (100%)
Strand = Plus / Plus
Query: 725 cagacgcatcgcctgggggaagtacatgaactgcgggcagacctgcatcgcccccgacta 784
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62597511 cagacgcatcgcctgggggaagtacatgaactgcgggcagacctgcatcgcccccgacta 62597570
Query: 785 cgtcctctgcgagccgtccctccaggaccaggtcgtgcagaagatgaaggaagccgtgaa 844
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62597571 cgtcctctgcgagccgtccctccaggaccaggtcgtgcagaagatgaaggaagccgtgaa 62597630
Query: 845 gg 846
||
Sbjct: 62597631 gg 62597632
Score = 176 bits (89), Expect = 2e-41
Identities = 89/89 (100%)
Strand = Plus / Plus
Query: 431 aggaaacgcggtgattatcaaaccttccgaaatcagcgaaaatacagccaagatcttggc 490
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62594875 aggaaacgcggtgattatcaaaccttccgaaatcagcgaaaatacagccaagatcttggc 62594934
Query: 491 gaagctcctcccccagtatttagaccagg 519
|||||||||||||||||||||||||||||
Sbjct: 62594935 gaagctcctcccccagtatttagaccagg 62594963
Score = 145 bits (73), Expect = 6e-32
Identities = 105/115 (91%), Gaps = 2/115 (1%)
Strand = Plus / Plus
Query: 987 agccccaaca-tacttacggatgttgatcctgaagccnaggtgatgcgagaagagatttt 1045
|||||||||| ||||||| |||||||||||||||||| ||||||||||||||||||||||
Sbjct: 62600524 agccccaacaatacttaccgatgttgatcctgaagccaaggtgatgcgagaagagatttt 62600583
Query: 1046 tggacccattc-tccaatantgcctgtgaagaatgcnnacnaanccctaaaattc 1099
||||||||||| ||||||| |||||||||||||||| || || || ||||||||
Sbjct: 62600584 tggacccattcttccaatagtgcctgtgaagaatgcagacgaagccgtaaaattc 62600638
Score = 75.8 bits (38), Expect = 5e-11
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 3 agttggtggcggcggagcgagcgcgctcgggaccgagg 40
||||||||||||||||||||||||||||||||||||||
Sbjct: 62591996 agttggtggcggcggagcgagcgcgctcgggaccgagg 62592033
Score = 73.8 bits (37), Expect = 2e-10
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 725 cagacgcatcgcctgggggaagtacatgaactgcgggcagacctgcatcgcccccgacta 784
|||||||||||||||||| |||| ||||||| |||| ||||||||| | | |||||||||
Sbjct: 62642203 cagacgcatcgcctggggcaagttcatgaacagcggccagacctgcgtgggccccgacta 62642144
Query: 785 cgtcctctg 793
| |||||||
Sbjct: 62642143 catcctctg 62642135
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 24,160,757
Number of extensions: 129
Number of successful extensions: 129
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 126
Number of HSP's successfully gapped: 9
Length of query: 1099
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1078
Effective length of database: 2,808,413,156
Effective search space: 3027469382168
Effective search space used: 3027469382168
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)